Query psy10867
Match_columns 343
No_of_seqs 761 out of 1512
Neff 12.1
Searched_HMMs 29240
Date Fri Aug 16 20:27:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 8E-52 2.7E-56 335.1 37.0 279 26-338 4-290 (304)
2 1vyh_C Platelet-activating fac 100.0 2.3E-51 7.8E-56 345.9 36.2 278 28-341 101-401 (410)
3 1nr0_A Actin interacting prote 100.0 4.7E-50 1.6E-54 354.4 43.4 297 32-341 144-557 (611)
4 3ow8_A WD repeat-containing pr 100.0 1.1E-50 3.8E-55 330.5 36.3 281 25-341 22-311 (321)
5 4g56_B MGC81050 protein; prote 100.0 2.1E-51 7.3E-56 339.6 32.3 297 6-341 17-333 (357)
6 1vyh_C Platelet-activating fac 100.0 6.6E-51 2.3E-55 343.1 35.5 270 6-309 121-410 (410)
7 1nr0_A Actin interacting prote 100.0 5.7E-50 2E-54 353.9 42.4 320 8-340 163-600 (611)
8 1got_B GT-beta; complex (GTP-b 100.0 1.1E-49 3.6E-54 327.8 39.2 282 25-341 45-333 (340)
9 1got_B GT-beta; complex (GTP-b 100.0 4.5E-50 1.5E-54 330.0 36.8 265 7-307 69-340 (340)
10 3ow8_A WD repeat-containing pr 100.0 5.8E-50 2E-54 326.2 35.5 268 6-309 49-320 (321)
11 4gqb_B Methylosome protein 50; 100.0 4.7E-50 1.6E-54 329.0 33.2 284 17-340 16-320 (344)
12 2pbi_B Guanine nucleotide-bind 100.0 3.9E-49 1.4E-53 325.8 37.7 285 25-341 54-347 (354)
13 2ymu_A WD-40 repeat protein; u 100.0 7.1E-48 2.4E-52 339.4 41.2 290 9-341 278-570 (577)
14 4gqb_B Methylosome protein 50; 100.0 1.1E-48 3.8E-53 320.9 31.3 275 3-312 32-333 (344)
15 2pbi_B Guanine nucleotide-bind 100.0 1.5E-47 5.1E-52 316.4 38.3 265 7-307 78-354 (354)
16 4ery_A WD repeat-containing pr 100.0 1.3E-47 4.4E-52 312.0 37.3 280 25-340 13-299 (312)
17 3frx_A Guanine nucleotide-bind 100.0 1.4E-47 4.7E-52 312.3 37.2 276 6-311 31-318 (319)
18 2ynn_A Coatomer subunit beta'; 100.0 1.4E-47 4.7E-52 310.3 36.6 274 3-310 15-302 (304)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-47 1.1E-51 313.5 39.0 297 24-341 4-325 (345)
20 3iz6_a 40S ribosomal protein R 100.0 6.8E-49 2.3E-53 327.8 29.2 303 15-341 46-365 (380)
21 1gxr_A ESG1, transducin-like e 100.0 4.4E-47 1.5E-51 312.2 39.1 301 3-341 11-327 (337)
22 4g56_B MGC81050 protein; prote 100.0 3.1E-48 1.1E-52 320.7 30.9 274 3-311 44-344 (357)
23 3frx_A Guanine nucleotide-bind 100.0 8.4E-47 2.9E-51 307.7 37.9 280 25-341 7-307 (319)
24 3iz6_a 40S ribosomal protein R 100.0 4.2E-48 1.4E-52 323.0 30.3 279 3-312 68-377 (380)
25 2xzm_R RACK1; ribosome, transl 100.0 9E-47 3.1E-51 310.8 37.8 280 5-312 39-342 (343)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 9E-47 3.1E-51 310.9 36.7 290 3-317 18-342 (345)
27 1erj_A Transcriptional repress 100.0 1.7E-46 6E-51 314.6 37.3 299 16-341 41-379 (393)
28 2hes_X YDR267CP; beta-propelle 100.0 4E-46 1.4E-50 305.1 38.2 292 23-341 2-318 (330)
29 2ymu_A WD-40 repeat protein; u 100.0 7.8E-46 2.7E-50 326.4 41.1 296 3-341 223-529 (577)
30 2xzm_R RACK1; ribosome, transl 100.0 1.6E-45 5.6E-50 303.3 39.9 283 25-341 11-330 (343)
31 1erj_A Transcriptional repress 100.0 6.5E-46 2.2E-50 311.1 36.5 281 2-311 65-390 (393)
32 4ery_A WD repeat-containing pr 100.0 3.5E-45 1.2E-49 297.7 37.5 272 3-309 25-311 (312)
33 2hes_X YDR267CP; beta-propelle 100.0 1E-45 3.5E-50 302.7 34.4 274 7-310 26-328 (330)
34 1r5m_A SIR4-interacting protei 100.0 1.5E-45 5.3E-50 312.4 35.9 296 7-341 60-415 (425)
35 3vl1_A 26S proteasome regulato 100.0 2.5E-45 8.4E-50 310.9 32.8 315 9-338 72-406 (420)
36 4aez_A CDC20, WD repeat-contai 100.0 8.5E-45 2.9E-49 305.5 35.5 276 8-318 106-388 (401)
37 2pm9_A Protein WEB1, protein t 100.0 4.2E-46 1.4E-50 315.2 24.3 305 7-341 27-404 (416)
38 4gga_A P55CDC, cell division c 100.0 8.7E-44 3E-48 301.0 37.4 282 14-328 124-414 (420)
39 4aow_A Guanine nucleotide-bind 100.0 2.2E-43 7.4E-48 290.6 38.4 284 23-341 26-327 (340)
40 3ei3_B DNA damage-binding prot 100.0 4.1E-44 1.4E-48 299.7 33.6 293 19-339 57-371 (383)
41 3zwl_B Eukaryotic translation 100.0 4.2E-43 1.4E-47 292.0 39.0 289 26-341 23-336 (369)
42 3zwl_B Eukaryotic translation 100.0 1.5E-43 5.1E-48 294.7 35.9 279 3-317 34-353 (369)
43 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-43 6.5E-48 336.3 41.3 336 3-341 617-1024(1249)
44 3v7d_B Cell division control p 100.0 3.4E-43 1.2E-47 301.5 38.2 289 6-339 133-450 (464)
45 2pm7_B Protein transport prote 100.0 2.6E-43 9E-48 284.2 33.9 254 29-309 3-284 (297)
46 3dm0_A Maltose-binding peripla 100.0 3E-43 1E-47 315.8 37.5 283 26-341 373-683 (694)
47 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-43 9.1E-48 293.6 33.6 303 3-313 10-364 (372)
48 4aow_A Guanine nucleotide-bind 100.0 1.1E-42 3.9E-47 286.3 36.9 278 7-312 53-339 (340)
49 3i2n_A WD repeat-containing pr 100.0 3.1E-43 1E-47 291.6 33.6 283 28-340 11-342 (357)
50 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-42 5.9E-47 295.5 38.9 291 6-341 130-428 (445)
51 1gxr_A ESG1, transducin-like e 100.0 9.6E-43 3.3E-47 286.3 35.8 268 3-308 53-335 (337)
52 1r5m_A SIR4-interacting protei 100.0 4.5E-43 1.5E-47 297.3 34.7 308 10-341 20-351 (425)
53 3dm0_A Maltose-binding peripla 100.0 3.6E-43 1.2E-47 315.3 34.8 278 6-309 396-692 (694)
54 1pgu_A Actin interacting prote 100.0 2E-42 6.9E-47 306.8 38.6 322 3-341 118-604 (615)
55 3k26_A Polycomb protein EED; W 100.0 1.1E-43 3.8E-48 295.2 27.9 296 2-309 19-365 (366)
56 1sq9_A Antiviral protein SKI8; 100.0 2E-43 6.7E-48 297.1 29.5 281 6-312 27-397 (397)
57 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-42 4.3E-47 317.7 35.9 274 26-334 4-284 (814)
58 3i2n_A WD repeat-containing pr 100.0 3.3E-43 1.1E-47 291.4 28.8 274 14-313 43-356 (357)
59 3odt_A Protein DOA1; ubiquitin 100.0 2.4E-42 8.1E-47 281.1 32.7 269 25-339 8-284 (313)
60 1sq9_A Antiviral protein SKI8; 100.0 1.3E-42 4.6E-47 292.0 32.1 281 27-341 8-385 (397)
61 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-43 5.4E-48 304.1 26.9 279 7-310 175-517 (524)
62 2pm9_A Protein WEB1, protein t 100.0 3.7E-43 1.3E-47 297.1 28.5 280 38-341 14-327 (416)
63 3mkq_A Coatomer beta'-subunit; 100.0 4E-42 1.4E-46 314.4 37.5 302 3-339 15-375 (814)
64 3bg1_A Protein SEC13 homolog; 100.0 2.8E-43 9.7E-48 286.5 26.3 253 30-309 8-292 (316)
65 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-41 4.1E-46 276.9 36.0 269 7-320 31-306 (313)
66 1pgu_A Actin interacting prote 100.0 6.1E-42 2.1E-46 303.8 36.6 297 3-339 20-354 (615)
67 3sfz_A APAF-1, apoptotic pepti 100.0 5.5E-43 1.9E-47 333.2 31.9 295 7-339 854-1197(1249)
68 1k8k_C P40, ARP2/3 complex 41 100.0 6.9E-42 2.4E-46 285.1 34.6 278 31-341 4-351 (372)
69 3k26_A Polycomb protein EED; W 100.0 8.4E-43 2.9E-47 289.9 28.1 286 31-341 14-356 (366)
70 4ggc_A P55CDC, cell division c 100.0 4.3E-41 1.5E-45 274.3 37.5 275 5-312 29-317 (318)
71 2oaj_A Protein SNI1; WD40 repe 100.0 5E-42 1.7E-46 313.6 35.1 324 7-341 71-595 (902)
72 3dwl_C Actin-related protein 2 100.0 3.8E-43 1.3E-47 293.3 23.6 297 3-308 13-377 (377)
73 3dw8_B Serine/threonine-protei 100.0 3.8E-42 1.3E-46 293.7 30.2 278 34-340 27-436 (447)
74 3mmy_A MRNA export factor; mRN 100.0 2.4E-41 8.2E-46 281.3 33.9 288 16-340 20-335 (368)
75 3vl1_A 26S proteasome regulato 100.0 7.4E-42 2.5E-46 289.6 31.4 280 5-310 109-419 (420)
76 4e54_B DNA damage-binding prot 100.0 1.5E-42 5.2E-47 294.7 26.6 283 27-339 111-419 (435)
77 3gre_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46 293.0 28.3 296 19-341 47-430 (437)
78 3dwl_C Actin-related protein 2 100.0 7.5E-43 2.6E-47 291.5 23.7 250 30-309 6-280 (377)
79 1yfq_A Cell cycle arrest prote 100.0 1.6E-41 5.3E-46 279.8 30.9 285 29-341 5-313 (342)
80 3ei3_B DNA damage-binding prot 100.0 2.3E-41 7.7E-46 283.1 31.6 266 7-310 88-382 (383)
81 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-41 7E-46 309.6 33.2 331 6-341 111-651 (902)
82 3jrp_A Fusion protein of prote 100.0 4.7E-41 1.6E-45 280.7 32.4 257 25-310 1-287 (379)
83 4h5i_A Guanine nucleotide-exch 100.0 2.3E-41 7.8E-46 280.4 29.2 270 3-310 16-343 (365)
84 1p22_A F-BOX/WD-repeat protein 100.0 4.5E-41 1.5E-45 285.8 30.6 286 6-330 144-434 (435)
85 4a11_B DNA excision repair pro 100.0 6.2E-41 2.1E-45 282.7 31.0 297 14-341 22-355 (408)
86 2pm7_B Protein transport prote 100.0 2.6E-40 8.8E-45 266.7 33.0 243 72-341 3-275 (297)
87 4e54_B DNA damage-binding prot 100.0 5.9E-42 2E-46 291.0 24.3 278 3-314 121-434 (435)
88 3v7d_B Cell division control p 100.0 3.5E-40 1.2E-44 282.9 35.1 294 26-339 112-410 (464)
89 4h5i_A Guanine nucleotide-exch 100.0 3E-41 1E-45 279.6 27.5 270 37-341 15-333 (365)
90 2j04_B YDR362CP, TAU91; beta p 100.0 9.9E-42 3.4E-46 293.0 24.0 246 28-309 127-427 (524)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 7.1E-41 2.4E-45 281.8 28.7 271 6-313 48-345 (402)
92 3f3f_A Nucleoporin SEH1; struc 100.0 6.8E-40 2.3E-44 270.4 33.5 278 29-318 5-345 (351)
93 4aez_A CDC20, WD repeat-contai 100.0 6.8E-40 2.3E-44 275.6 32.3 265 38-341 95-370 (401)
94 3dw8_B Serine/threonine-protei 100.0 3.7E-40 1.3E-44 281.3 30.9 283 3-308 30-444 (447)
95 3gre_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 283.2 27.5 278 3-307 65-437 (437)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 6.1E-40 2.1E-44 276.1 30.1 269 38-339 36-332 (402)
97 4gga_A P55CDC, cell division c 100.0 8.5E-39 2.9E-43 270.5 36.0 267 36-341 105-385 (420)
98 1l0q_A Surface layer protein; 100.0 5.7E-38 2E-42 263.2 39.5 291 6-337 3-306 (391)
99 4ggc_A P55CDC, cell division c 100.0 2.8E-38 9.7E-43 257.6 35.5 265 38-341 27-305 (318)
100 4a11_B DNA excision repair pro 100.0 3.1E-39 1E-43 272.3 29.6 290 7-318 58-373 (408)
101 3jro_A Fusion protein of prote 100.0 9.5E-40 3.3E-44 294.7 27.3 254 28-310 2-285 (753)
102 3bg1_A Protein SEC13 homolog; 100.0 1.3E-39 4.6E-44 264.8 25.1 241 73-341 8-283 (316)
103 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-38 8.6E-43 268.9 33.2 263 32-341 130-404 (435)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3E-38 1E-42 269.5 33.4 278 38-337 6-371 (450)
105 2j04_A TAU60, YPL007P, hypothe 100.0 9.5E-41 3.2E-45 280.6 17.0 274 3-339 54-349 (588)
106 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9E-38 3.1E-42 266.4 35.2 264 6-310 170-442 (445)
107 3jrp_A Fusion protein of prote 100.0 4.5E-38 1.5E-42 262.6 31.2 244 69-341 2-277 (379)
108 3bws_A Protein LP49; two-domai 100.0 1.9E-37 6.6E-42 263.5 35.5 286 16-340 102-420 (433)
109 1yfq_A Cell cycle arrest prote 100.0 3.7E-38 1.3E-42 259.6 29.1 259 8-307 26-321 (342)
110 2xyi_A Probable histone-bindin 100.0 8.5E-38 2.9E-42 265.0 30.7 262 29-311 122-411 (430)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-37 7.3E-42 264.3 33.0 274 2-309 5-390 (450)
112 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-38 7.1E-43 266.5 22.5 248 38-339 17-286 (588)
113 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-36 4E-41 251.4 31.0 276 19-341 3-326 (355)
114 3f3f_A Nucleoporin SEH1; struc 100.0 7.3E-37 2.5E-41 252.3 29.6 246 72-341 5-327 (351)
115 3lrv_A PRE-mRNA-splicing facto 100.0 4.6E-37 1.6E-41 253.0 27.8 257 44-339 44-321 (343)
116 3mmy_A MRNA export factor; mRN 100.0 8.8E-37 3E-41 253.7 27.9 268 6-309 55-345 (368)
117 3vu4_A KMHSV2; beta-propeller 100.0 7.6E-36 2.6E-40 246.5 31.8 291 2-312 20-338 (355)
118 3bws_A Protein LP49; two-domai 100.0 1.5E-35 5E-40 251.9 34.1 268 5-310 134-432 (433)
119 2xyi_A Probable histone-bindin 100.0 7.4E-36 2.5E-40 253.1 30.8 241 74-340 124-399 (430)
120 3jro_A Fusion protein of prote 100.0 7.1E-36 2.4E-40 269.5 27.8 241 72-341 3-275 (753)
121 2w18_A PALB2, fancn, partner a 100.0 2.6E-35 8.8E-40 233.1 26.0 260 8-308 56-355 (356)
122 4gq1_A NUP37; propeller, trans 100.0 9.2E-36 3.1E-40 249.4 25.0 278 38-340 17-379 (393)
123 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-34 4.1E-39 243.9 31.8 281 12-334 86-411 (415)
124 4gq1_A NUP37; propeller, trans 100.0 7.7E-36 2.6E-40 249.9 24.4 252 44-309 97-388 (393)
125 1l0q_A Surface layer protein; 100.0 1.1E-33 3.8E-38 237.2 35.8 252 48-338 2-261 (391)
126 1nir_A Nitrite reductase; hemo 100.0 1.7E-32 5.7E-37 237.6 34.9 307 3-340 147-498 (543)
127 2ecf_A Dipeptidyl peptidase IV 100.0 3.5E-32 1.2E-36 246.2 32.4 302 3-339 38-443 (741)
128 3u4y_A Uncharacterized protein 100.0 2.7E-30 9.3E-35 211.7 33.9 304 5-332 10-326 (331)
129 2w18_A PALB2, fancn, partner a 100.0 4.3E-31 1.5E-35 209.1 27.7 285 24-342 24-348 (356)
130 3lrv_A PRE-mRNA-splicing facto 100.0 4.1E-31 1.4E-35 217.5 27.3 222 8-255 88-331 (343)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.5E-31 5E-36 225.2 23.2 264 38-340 64-373 (415)
132 1xfd_A DIP, dipeptidyl aminope 100.0 7.1E-31 2.4E-35 237.1 29.0 301 13-340 35-429 (723)
133 2z3z_A Dipeptidyl aminopeptida 100.0 7.8E-31 2.7E-35 236.1 28.4 292 9-339 39-419 (706)
134 1ri6_A Putative isomerase YBHE 100.0 4.4E-29 1.5E-33 205.3 32.3 298 6-334 5-336 (343)
135 1nir_A Nitrite reductase; hemo 100.0 2.9E-29 9.9E-34 217.3 29.4 274 43-339 144-439 (543)
136 2ojh_A Uncharacterized protein 100.0 1.2E-29 4.2E-34 204.2 25.3 252 54-342 18-293 (297)
137 3vgz_A Uncharacterized protein 100.0 2.9E-28 9.8E-33 201.4 31.6 266 38-341 42-334 (353)
138 2ojh_A Uncharacterized protein 100.0 4.5E-29 1.6E-33 200.9 25.0 253 12-301 19-293 (297)
139 1pby_B Quinohemoprotein amine 100.0 1.4E-28 4.8E-33 201.8 27.3 270 6-318 2-318 (337)
140 2ecf_A Dipeptidyl peptidase IV 100.0 3.2E-29 1.1E-33 226.9 25.1 280 38-339 38-398 (741)
141 1k32_A Tricorn protease; prote 100.0 1.1E-28 3.6E-33 230.7 27.8 283 15-340 183-491 (1045)
142 3vgz_A Uncharacterized protein 100.0 6.2E-27 2.1E-31 193.4 32.4 253 14-301 68-335 (353)
143 2z3z_A Dipeptidyl aminopeptida 100.0 2.1E-27 7.3E-32 213.8 31.8 275 3-312 83-437 (706)
144 1k32_A Tricorn protease; prote 100.0 2.3E-27 7.9E-32 221.6 30.8 303 4-339 247-626 (1045)
145 3hfq_A Uncharacterized protein 100.0 2.7E-26 9.1E-31 189.2 32.2 274 11-314 12-323 (347)
146 3u4y_A Uncharacterized protein 100.0 9.6E-27 3.3E-31 190.5 29.3 264 43-340 4-292 (331)
147 1ri6_A Putative isomerase YBHE 100.0 9.7E-27 3.3E-31 191.4 28.8 266 48-340 5-296 (343)
148 1xfd_A DIP, dipeptidyl aminope 100.0 3.5E-28 1.2E-32 219.5 19.2 273 38-339 18-378 (723)
149 1pby_B Quinohemoprotein amine 100.0 3.7E-27 1.3E-31 193.3 21.0 253 49-340 2-299 (337)
150 3scy_A Hypothetical bacterial 100.0 9.4E-25 3.2E-29 180.9 35.4 291 11-329 23-360 (361)
151 3o4h_A Acylamino-acid-releasin 100.0 6.8E-27 2.3E-31 205.8 22.5 255 38-339 23-300 (582)
152 1z68_A Fibroblast activation p 100.0 1.4E-26 4.8E-31 208.9 24.5 296 13-338 34-427 (719)
153 1jmx_B Amine dehydrogenase; ox 99.9 6.4E-25 2.2E-29 180.9 30.1 293 4-318 10-333 (349)
154 3pe7_A Oligogalacturonate lyas 99.9 6.2E-26 2.1E-30 189.9 23.3 287 19-340 14-370 (388)
155 3hfq_A Uncharacterized protein 99.9 2.3E-24 7.9E-29 177.6 31.1 268 57-340 15-305 (347)
156 1jmx_B Amine dehydrogenase; ox 99.9 8.4E-25 2.9E-29 180.2 28.2 252 41-339 4-313 (349)
157 3o4h_A Acylamino-acid-releasin 99.9 5E-25 1.7E-29 193.9 26.2 258 3-310 23-315 (582)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-24 4.6E-29 183.4 25.7 217 6-258 16-279 (434)
159 3scy_A Hypothetical bacterial 99.9 1.7E-23 5.8E-28 173.3 30.7 278 45-340 10-325 (361)
160 2oiz_A Aromatic amine dehydrog 99.9 7.8E-24 2.7E-28 174.6 27.8 282 14-333 30-360 (361)
161 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-24 5.7E-29 182.8 21.5 230 58-311 23-279 (434)
162 4a5s_A Dipeptidyl peptidase 4 99.9 3E-23 1E-27 187.3 30.3 310 14-339 35-434 (740)
163 1z68_A Fibroblast activation p 99.9 6.9E-25 2.4E-29 197.8 17.9 270 40-340 19-375 (719)
164 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.2E-22 1.4E-26 165.0 31.0 265 15-311 14-342 (365)
165 3c5m_A Oligogalacturonate lyas 99.9 5.3E-24 1.8E-28 178.6 19.2 283 18-340 13-370 (396)
166 4a5s_A Dipeptidyl peptidase 4 99.9 6.6E-23 2.3E-27 185.1 25.3 273 38-339 18-381 (740)
167 3pe7_A Oligogalacturonate lyas 99.9 3E-22 1E-26 167.5 26.1 264 7-309 50-381 (388)
168 3dsm_A Uncharacterized protein 99.9 2.7E-20 9.2E-25 151.6 32.7 275 14-329 16-320 (328)
169 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.5E-21 8.4E-26 160.4 25.8 260 58-340 14-329 (365)
170 3azo_A Aminopeptidase; POP fam 99.9 1.1E-21 3.8E-26 175.3 24.4 266 30-336 18-350 (662)
171 1q7f_A NHL, brain tumor CG1071 99.9 4.2E-20 1.4E-24 147.8 30.5 236 38-312 31-282 (286)
172 3fvz_A Peptidyl-glycine alpha- 99.9 2.1E-20 7.3E-25 152.5 27.3 250 38-310 25-322 (329)
173 2dg1_A DRP35, lactonase; beta 99.9 2.7E-20 9.3E-25 152.3 26.3 272 38-339 7-298 (333)
174 3c5m_A Oligogalacturonate lyas 99.9 1.2E-20 4.1E-25 158.2 24.0 257 15-312 60-386 (396)
175 1qks_A Cytochrome CD1 nitrite 99.9 2E-18 6.9E-23 149.3 38.1 306 5-340 167-522 (567)
176 3azo_A Aminopeptidase; POP fam 99.9 1.8E-20 6.2E-25 167.5 24.5 268 12-314 44-373 (662)
177 2dg1_A DRP35, lactonase; beta 99.9 3.3E-19 1.1E-23 145.9 30.1 253 14-300 26-300 (333)
178 2gop_A Trilobed protease; beta 99.9 2.7E-19 9.2E-24 147.2 27.1 240 14-312 42-332 (347)
179 2oiz_A Aromatic amine dehydrog 99.9 1.1E-19 3.8E-24 149.9 24.0 255 57-339 30-323 (361)
180 3fvz_A Peptidyl-glycine alpha- 99.9 2.2E-18 7.6E-23 140.5 30.4 220 15-258 69-323 (329)
181 2gop_A Trilobed protease; beta 99.9 2.3E-19 7.7E-24 147.7 24.7 244 38-338 16-317 (347)
182 3no2_A Uncharacterized protein 99.9 8E-19 2.7E-23 138.9 26.6 244 47-318 4-260 (276)
183 1q7f_A NHL, brain tumor CG1071 99.8 8.2E-18 2.8E-22 134.5 29.8 219 8-257 44-280 (286)
184 1rwi_B Serine/threonine-protei 99.8 2.1E-18 7E-23 136.8 26.1 241 38-313 25-267 (270)
185 3e5z_A Putative gluconolactona 99.8 5E-18 1.7E-22 136.5 27.2 232 72-339 21-275 (296)
186 3e5z_A Putative gluconolactona 99.8 4.4E-18 1.5E-22 136.8 26.0 243 25-312 17-288 (296)
187 2z2n_A Virginiamycin B lyase; 99.8 3.6E-16 1.2E-20 125.6 37.3 265 33-338 12-283 (299)
188 2mad_H Methylamine dehydrogena 99.8 2.5E-16 8.5E-21 129.9 35.3 272 6-317 33-357 (373)
189 2xdw_A Prolyl endopeptidase; a 99.8 5.9E-18 2E-22 152.2 27.8 229 77-336 123-395 (710)
190 3no2_A Uncharacterized protein 99.8 4.5E-17 1.5E-21 128.8 29.2 211 5-245 5-231 (276)
191 2xdw_A Prolyl endopeptidase; a 99.8 6.5E-18 2.2E-22 152.0 27.2 239 38-312 126-416 (710)
192 3sjl_D Methylamine dehydrogena 99.8 8.2E-18 2.8E-22 136.9 24.9 279 14-331 58-384 (386)
193 2bkl_A Prolyl endopeptidase; m 99.8 5.8E-18 2E-22 151.9 25.8 241 34-313 119-400 (695)
194 3dsm_A Uncharacterized protein 99.8 3.5E-17 1.2E-21 133.2 27.9 249 57-339 16-285 (328)
195 1qks_A Cytochrome CD1 nitrite 99.8 1.8E-16 6.1E-21 137.2 33.1 273 45-339 164-458 (567)
196 2z2n_A Virginiamycin B lyase; 99.8 2.2E-15 7.5E-20 121.1 36.2 256 14-312 35-297 (299)
197 1rwi_B Serine/threonine-protei 99.8 1.9E-16 6.6E-21 125.4 26.8 228 6-259 36-266 (270)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 3.6E-16 1.2E-20 126.7 28.7 235 38-310 19-299 (314)
199 2qc5_A Streptogramin B lactona 99.8 1.2E-14 4E-19 116.9 35.8 261 38-338 21-289 (300)
200 2bkl_A Prolyl endopeptidase; m 99.8 3.6E-17 1.2E-21 146.7 23.1 226 77-336 119-378 (695)
201 2mad_H Methylamine dehydrogena 99.8 3.3E-15 1.1E-19 123.2 32.0 265 44-340 28-338 (373)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 1.9E-15 6.6E-20 122.4 28.7 234 78-339 17-286 (314)
203 3c75_H MADH, methylamine dehyd 99.8 2.3E-16 7.9E-21 130.7 23.1 278 15-331 99-423 (426)
204 2qc5_A Streptogramin B lactona 99.7 7.1E-14 2.4E-18 112.3 34.6 258 9-308 35-298 (300)
205 3g4e_A Regucalcin; six bladed 99.7 3.1E-14 1.1E-18 114.2 31.8 230 38-340 14-261 (297)
206 3hrp_A Uncharacterized protein 99.7 2.5E-14 8.7E-19 119.6 31.8 249 38-308 132-408 (409)
207 1yr2_A Prolyl oligopeptidase; 99.7 9.4E-16 3.2E-20 138.5 24.3 224 79-336 163-422 (741)
208 1xip_A Nucleoporin NUP159; bet 99.7 7.9E-15 2.7E-19 120.0 25.6 170 38-243 39-230 (388)
209 3sjl_D Methylamine dehydrogena 99.7 2.8E-15 9.6E-20 122.1 22.5 267 42-339 38-350 (386)
210 3g4e_A Regucalcin; six bladed 99.7 6.2E-14 2.1E-18 112.5 29.4 216 6-246 26-261 (297)
211 1yr2_A Prolyl oligopeptidase; 99.7 7.5E-15 2.6E-19 132.7 26.8 239 38-312 164-443 (741)
212 2qe8_A Uncharacterized protein 99.7 9.4E-15 3.2E-19 119.7 24.8 262 38-339 18-309 (343)
213 1mda_H Methylamine dehydrogena 99.7 4E-15 1.4E-19 121.4 21.2 269 16-331 47-367 (368)
214 1yiq_A Quinohemoprotein alcoho 99.7 1.5E-14 5E-19 128.9 26.0 306 5-337 70-534 (689)
215 3c75_H MADH, methylamine dehyd 99.7 4.9E-15 1.7E-19 122.9 20.8 253 58-340 99-390 (426)
216 3hrp_A Uncharacterized protein 99.7 1.4E-13 4.8E-18 115.1 28.8 235 7-255 144-408 (409)
217 3dr2_A Exported gluconolactona 99.7 5.5E-14 1.9E-18 113.3 25.1 230 74-339 40-295 (305)
218 1kb0_A Quinohemoprotein alcoho 99.7 1.8E-14 6.2E-19 128.0 23.8 306 5-337 77-536 (677)
219 2ghs_A AGR_C_1268P; regucalcin 99.7 5.4E-13 1.9E-17 108.4 29.9 224 81-339 51-290 (326)
220 2ghs_A AGR_C_1268P; regucalcin 99.7 2.9E-13 9.8E-18 110.0 27.9 220 38-299 50-291 (326)
221 1xip_A Nucleoporin NUP159; bet 99.6 1.2E-14 4E-19 119.0 18.1 182 121-340 39-233 (388)
222 3dr2_A Exported gluconolactona 99.6 6.3E-13 2.2E-17 107.0 25.9 212 7-248 59-298 (305)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.6 1.1E-12 3.8E-17 108.9 27.2 279 5-318 53-345 (376)
224 3iuj_A Prolyl endopeptidase; h 99.6 6.8E-14 2.3E-18 125.3 20.8 237 38-312 130-407 (693)
225 1fwx_A Nitrous oxide reductase 99.6 1.4E-13 4.8E-18 116.8 20.0 287 7-339 17-406 (595)
226 2ece_A 462AA long hypothetical 99.6 8E-13 2.7E-17 108.5 23.7 230 88-339 93-399 (462)
227 1mda_H Methylamine dehydrogena 99.6 7.8E-14 2.7E-18 113.8 17.4 253 48-339 32-332 (368)
228 3hxj_A Pyrrolo-quinoline quino 99.6 7.1E-14 2.4E-18 113.9 17.3 278 7-337 32-311 (330)
229 3iuj_A Prolyl endopeptidase; h 99.5 8.2E-13 2.8E-17 118.4 21.4 227 77-338 127-388 (693)
230 1kb0_A Quinohemoprotein alcoho 99.5 4.8E-12 1.7E-16 112.5 24.9 255 6-264 129-514 (677)
231 1yiq_A Quinohemoprotein alcoho 99.5 8E-12 2.7E-16 111.4 25.6 257 6-264 122-512 (689)
232 2ece_A 462AA long hypothetical 99.5 2.3E-11 7.9E-16 99.9 25.9 232 6-245 97-399 (462)
233 2hz6_A Endoplasmic reticulum t 99.5 2.7E-14 9.4E-19 117.9 7.6 256 5-309 9-278 (369)
234 2hz6_A Endoplasmic reticulum t 99.5 1.9E-14 6.6E-19 118.8 5.3 204 89-333 9-216 (369)
235 2iwa_A Glutamine cyclotransfer 99.5 1.7E-10 5.7E-15 89.2 26.6 211 25-259 9-239 (266)
236 2qe8_A Uncharacterized protein 99.5 1.3E-11 4.4E-16 101.1 21.2 198 38-249 68-313 (343)
237 1kv9_A Type II quinohemoprotei 99.5 5.4E-11 1.8E-15 105.8 26.4 303 5-334 66-514 (668)
238 1npe_A Nidogen, entactin; glyc 99.5 8.7E-10 3E-14 86.8 30.1 246 50-333 3-263 (267)
239 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.7E-11 1.3E-15 99.7 22.6 254 7-307 105-375 (376)
240 2ad6_A Methanol dehydrogenase 99.4 6.2E-11 2.1E-15 103.2 23.6 305 5-337 62-523 (571)
241 4a2l_A BT_4663, two-component 99.4 8.3E-09 2.8E-13 94.2 38.4 292 15-338 193-515 (795)
242 1npe_A Nidogen, entactin; glyc 99.4 3.5E-09 1.2E-13 83.4 30.0 248 7-292 4-263 (267)
243 1fwx_A Nitrous oxide reductase 99.4 2.1E-11 7.1E-16 103.7 17.8 275 13-332 110-455 (595)
244 3hxj_A Pyrrolo-quinoline quino 99.4 1E-10 3.5E-15 95.2 21.0 215 7-257 109-324 (330)
245 1w6s_A Methanol dehydrogenase 99.4 5E-10 1.7E-14 97.6 26.3 305 5-335 62-530 (599)
246 4a2l_A BT_4663, two-component 99.4 5.2E-08 1.8E-12 88.9 40.6 289 16-338 283-603 (795)
247 3nok_A Glutaminyl cyclase; bet 99.4 2.3E-09 8E-14 81.8 25.9 196 26-245 44-253 (268)
248 2iwa_A Glutamine cyclotransfer 99.4 1.7E-10 5.9E-15 89.1 19.5 196 110-339 10-224 (266)
249 1flg_A Protein (quinoprotein e 99.4 4.6E-10 1.6E-14 97.9 24.2 304 6-336 69-544 (582)
250 3nol_A Glutamine cyclotransfer 99.4 1.8E-09 6.1E-14 82.4 24.4 193 26-246 32-244 (262)
251 3nol_A Glutamine cyclotransfer 99.3 4.5E-10 1.5E-14 85.7 19.3 193 111-339 33-243 (262)
252 2fp8_A Strictosidine synthase; 99.3 7.9E-09 2.7E-13 83.7 26.0 238 38-310 20-313 (322)
253 2p4o_A Hypothetical protein; p 99.3 4.6E-08 1.6E-12 78.5 30.0 249 24-301 21-279 (306)
254 3nok_A Glutaminyl cyclase; bet 99.3 2.2E-09 7.5E-14 81.9 20.0 193 110-338 44-252 (268)
255 3mbr_X Glutamine cyclotransfer 99.2 5.2E-08 1.8E-12 73.8 26.9 196 25-246 9-223 (243)
256 3v9f_A Two-component system se 99.2 3.4E-07 1.2E-11 83.4 37.5 287 16-337 231-555 (781)
257 1kv9_A Type II quinohemoprotei 99.2 8.3E-09 2.8E-13 91.8 25.1 256 6-264 118-495 (668)
258 2p4o_A Hypothetical protein; p 99.2 8.1E-08 2.8E-12 77.1 28.7 225 79-340 32-277 (306)
259 3v9f_A Two-component system se 99.2 2E-07 6.7E-12 85.0 34.3 286 15-338 278-600 (781)
260 3mbr_X Glutamine cyclotransfer 99.2 1.2E-08 3.9E-13 77.3 21.1 193 111-338 11-221 (243)
261 2ad6_A Methanol dehydrogenase 99.2 2.6E-08 9E-13 86.8 25.5 255 6-264 116-501 (571)
262 2fp8_A Strictosidine synthase; 99.2 5.2E-08 1.8E-12 78.9 25.6 223 80-337 20-299 (322)
263 3v64_C Agrin; beta propeller, 99.1 7.6E-07 2.6E-11 72.7 31.2 242 38-318 35-283 (349)
264 3v65_B Low-density lipoprotein 99.1 5.1E-07 1.8E-11 74.8 30.3 251 40-328 80-337 (386)
265 1k3i_A Galactose oxidase precu 99.1 9.1E-08 3.1E-12 85.3 24.5 273 40-340 189-530 (656)
266 1w6s_A Methanol dehydrogenase 99.0 2.4E-07 8.1E-12 80.9 25.6 253 8-264 124-510 (599)
267 1flg_A Protein (quinoprotein e 99.0 3.2E-07 1.1E-11 80.1 24.8 256 6-264 118-523 (582)
268 3qqz_A Putative uncharacterize 99.0 1.8E-06 6.1E-11 66.4 25.9 208 30-254 21-250 (255)
269 1ijq_A LDL receptor, low-densi 99.0 5.2E-06 1.8E-10 66.8 30.7 226 58-318 10-246 (316)
270 3p5b_L Low density lipoprotein 99.0 8.4E-06 2.9E-10 67.9 32.7 243 50-327 85-338 (400)
271 4hw6_A Hypothetical protein, I 98.9 1E-06 3.6E-11 74.0 23.4 245 38-309 140-432 (433)
272 3amr_A 3-phytase; beta-propell 98.9 1.6E-06 5.4E-11 69.2 22.9 202 92-318 43-272 (355)
273 3tc9_A Hypothetical hydrolase; 98.9 2.7E-06 9.3E-11 71.5 25.0 235 80-340 138-418 (430)
274 3v65_B Low-density lipoprotein 98.9 2E-05 6.8E-10 65.3 30.8 217 15-257 96-318 (386)
275 3v64_C Agrin; beta propeller, 98.9 1.9E-05 6.4E-10 64.5 31.6 217 15-257 53-275 (349)
276 1k3i_A Galactose oxidase precu 98.9 9.5E-07 3.3E-11 78.7 22.8 256 16-299 220-530 (656)
277 3tc9_A Hypothetical hydrolase; 98.8 1.2E-05 4.1E-10 67.6 27.6 230 15-256 159-429 (430)
278 3qqz_A Putative uncharacterize 98.8 9.9E-06 3.4E-10 62.3 24.6 212 74-308 22-251 (255)
279 3sov_A LRP-6, low-density lipo 98.8 1.9E-05 6.6E-10 63.4 27.3 225 58-318 13-246 (318)
280 4hw6_A Hypothetical protein, I 98.8 1.7E-05 5.8E-10 66.7 26.9 230 15-256 162-432 (433)
281 1ijq_A LDL receptor, low-densi 98.8 3.2E-05 1.1E-09 62.2 33.0 223 7-258 4-239 (316)
282 2xe4_A Oligopeptidase B; hydro 98.8 2.1E-06 7E-11 77.7 22.2 193 80-308 175-398 (751)
283 2ism_A Putative oxidoreductase 98.7 6E-05 2.1E-09 61.5 28.5 239 78-339 30-333 (352)
284 3p5b_L Low density lipoprotein 98.7 7.4E-05 2.5E-09 62.2 34.1 219 15-259 92-322 (400)
285 3m0c_C LDL receptor, low-densi 98.7 0.00011 3.8E-09 66.3 31.1 227 58-318 404-640 (791)
286 2xe4_A Oligopeptidase B; hydro 98.7 3.9E-06 1.3E-10 75.9 21.9 131 16-150 202-354 (751)
287 2xzh_A Clathrin heavy chain 1; 98.7 5.6E-05 1.9E-09 59.4 30.1 217 14-260 48-293 (365)
288 2xbg_A YCF48-like protein; pho 98.7 8.1E-05 2.8E-09 60.2 28.2 230 38-307 81-319 (327)
289 2ism_A Putative oxidoreductase 98.6 0.00012 4.2E-09 59.7 26.7 238 38-298 32-333 (352)
290 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00024 8.2E-09 62.6 32.1 235 46-318 5-245 (628)
291 3amr_A 3-phytase; beta-propell 98.6 0.00011 3.9E-09 58.7 24.8 198 3-224 38-272 (355)
292 3s94_A LRP-6, low-density lipo 98.6 0.00026 8.8E-09 62.4 34.2 314 9-339 100-453 (619)
293 3kya_A Putative phosphatase; s 98.6 9.7E-05 3.3E-09 62.4 25.4 263 39-316 141-481 (496)
294 2xbg_A YCF48-like protein; pho 98.6 0.00016 5.6E-09 58.3 35.6 260 38-339 37-311 (327)
295 1bpo_A Protein (clathrin); cla 98.6 0.00019 6.5E-09 58.7 30.3 217 14-260 47-292 (494)
296 3sov_A LRP-6, low-density lipo 98.6 0.00016 5.6E-09 58.0 29.5 226 6-259 6-240 (318)
297 1n7d_A LDL receptor, low-densi 98.5 3.3E-06 1.1E-10 75.5 16.5 219 15-259 386-616 (699)
298 1n7d_A LDL receptor, low-densi 98.5 8.3E-07 2.8E-11 79.3 12.1 238 58-329 386-634 (699)
299 3sre_A PON1, serum paraoxonase 98.5 0.00015 5.1E-09 58.8 24.0 198 80-308 51-296 (355)
300 4a0p_A LRP6, LRP-6, low-densit 98.5 0.00057 1.9E-08 60.3 32.7 226 5-258 7-238 (628)
301 3m0c_C LDL receptor, low-densi 98.5 0.00078 2.7E-08 60.9 33.5 217 15-258 404-633 (791)
302 2xzh_A Clathrin heavy chain 1; 98.5 0.00028 9.5E-09 55.5 27.9 223 14-257 86-332 (365)
303 3s94_A LRP-6, low-density lipo 98.4 0.00067 2.3E-08 59.7 34.6 181 14-220 61-247 (619)
304 3kya_A Putative phosphatase; s 98.4 0.00059 2E-08 57.8 26.2 233 14-259 161-477 (496)
305 2p9w_A MAL S 1 allergenic prot 98.4 0.00036 1.2E-08 55.3 23.1 206 31-256 8-264 (334)
306 3a9g_A Putative uncharacterize 98.4 0.00057 1.9E-08 55.8 28.7 233 38-298 30-330 (354)
307 1bpo_A Protein (clathrin); cla 98.3 0.00081 2.8E-08 55.1 29.1 224 14-258 85-332 (494)
308 3a9g_A Putative uncharacterize 98.3 0.001 3.5E-08 54.3 28.5 239 78-338 28-329 (354)
309 2p9w_A MAL S 1 allergenic prot 98.2 0.00014 4.7E-09 57.7 17.1 164 81-257 15-215 (334)
310 3sbq_A Nitrous-oxide reductase 98.1 0.0016 5.5E-08 55.1 22.1 131 208-339 299-453 (638)
311 2g8s_A Glucose/sorbosone dehyd 98.1 0.003 1E-07 51.5 26.8 239 38-297 19-340 (353)
312 1xi4_A Clathrin heavy chain; a 98.0 0.0017 6E-08 61.3 22.0 219 14-262 47-294 (1630)
313 3pbp_A Nucleoporin NUP82; beta 98.0 0.002 6.8E-08 52.8 20.0 154 44-212 28-208 (452)
314 2vpj_A Kelch-like protein 12; 98.0 0.0029 1E-07 50.2 20.9 215 58-312 31-280 (301)
315 2g8s_A Glucose/sorbosone dehyd 98.0 0.0044 1.5E-07 50.5 25.8 240 79-337 18-339 (353)
316 3sre_A PON1, serum paraoxonase 98.0 0.0045 1.5E-07 50.2 23.4 184 38-247 51-287 (355)
317 2be1_A Serine/threonine-protei 98.0 0.0019 6.6E-08 51.8 18.6 113 4-117 9-139 (339)
318 3ei3_A DNA damage-binding prot 97.9 0.011 3.8E-07 56.0 25.8 216 15-255 807-1060(1158)
319 2vpj_A Kelch-like protein 12; 97.9 0.0043 1.5E-07 49.3 19.7 213 15-257 31-278 (301)
320 3pbp_A Nucleoporin NUP82; beta 97.9 0.0029 9.8E-08 51.9 18.1 171 87-306 29-208 (452)
321 3ii7_A Kelch-like protein 7; p 97.8 0.0072 2.5E-07 48.1 20.8 225 48-312 12-274 (306)
322 1tl2_A L10, protein (tachylect 97.8 0.0043 1.5E-07 46.0 16.5 133 4-144 3-157 (236)
323 3das_A Putative oxidoreductase 97.7 0.013 4.6E-07 47.2 30.1 248 76-339 29-326 (347)
324 3das_A Putative oxidoreductase 97.7 0.013 4.6E-07 47.2 29.2 245 28-298 24-326 (347)
325 2xn4_A Kelch-like protein 2; s 97.7 0.013 4.3E-07 46.6 19.7 216 58-313 30-279 (302)
326 1xi4_A Clathrin heavy chain; a 97.7 0.013 4.4E-07 55.7 21.2 232 58-318 48-297 (1630)
327 2xn4_A Kelch-like protein 2; s 97.6 0.012 4.1E-07 46.7 19.0 213 15-257 30-276 (302)
328 3ei3_A DNA damage-binding prot 97.6 0.046 1.6E-06 51.9 35.5 132 15-149 492-635 (1158)
329 3ii7_A Kelch-like protein 7; p 97.6 0.011 3.6E-07 47.1 18.5 220 7-257 14-272 (306)
330 1zgk_A Kelch-like ECH-associat 97.6 0.015 5E-07 46.4 19.0 226 47-312 24-289 (308)
331 2be1_A Serine/threonine-protei 97.6 0.0048 1.6E-07 49.6 15.2 206 89-323 10-245 (339)
332 1cru_A Protein (soluble quinop 97.5 0.03 1E-06 47.3 28.1 102 38-139 28-163 (454)
333 1zgk_A Kelch-like ECH-associat 97.5 0.025 8.4E-07 45.1 18.6 213 15-257 39-287 (308)
334 1tl2_A L10, protein (tachylect 97.4 0.024 8.2E-07 42.1 15.9 147 79-250 41-203 (236)
335 4asc_A Kelch repeat and BTB do 97.2 0.054 1.9E-06 43.2 19.4 180 49-257 6-221 (315)
336 4asc_A Kelch repeat and BTB do 97.2 0.055 1.9E-06 43.1 19.2 132 15-151 13-175 (315)
337 3ott_A Two-component system se 97.2 0.13 4.4E-06 46.7 35.8 288 16-336 122-434 (758)
338 1cru_A Protein (soluble quinop 97.0 0.13 4.4E-06 43.4 20.8 60 78-137 26-97 (454)
339 2uvk_A YJHT; unknown function, 97.0 0.11 3.7E-06 42.3 18.6 91 47-140 19-128 (357)
340 3sbq_A Nitrous-oxide reductase 96.9 0.15 5.2E-06 43.5 19.5 249 7-258 72-409 (638)
341 2uvk_A YJHT; unknown function, 96.9 0.12 4.3E-06 41.9 17.8 49 99-148 168-224 (357)
342 3ott_A Two-component system se 96.8 0.27 9.3E-06 44.6 37.1 265 38-336 64-339 (758)
343 3s25_A Hypothetical 7-bladed b 96.8 0.13 4.4E-06 40.8 23.0 223 56-339 35-280 (302)
344 3s25_A Hypothetical 7-bladed b 96.8 0.13 4.5E-06 40.7 17.8 194 88-338 23-240 (302)
345 2woz_A Kelch repeat and BTB do 96.5 0.21 7.3E-06 39.8 20.4 140 7-152 17-186 (318)
346 2woz_A Kelch repeat and BTB do 96.5 0.22 7.5E-06 39.7 20.9 225 49-313 17-290 (318)
347 2zwa_A Leucine carboxyl methyl 95.9 0.88 3E-05 40.8 21.0 137 15-152 412-579 (695)
348 3qhy_B Beta-lactamase inhibito 95.9 0.44 1.5E-05 37.3 16.2 205 14-257 41-246 (282)
349 2zwa_A Leucine carboxyl methyl 95.8 0.92 3.2E-05 40.7 17.8 198 88-314 396-639 (695)
350 3qhy_B Beta-lactamase inhibito 95.7 0.55 1.9E-05 36.7 23.1 247 38-339 25-272 (282)
351 2wg3_C Hedgehog-interacting pr 95.5 1 3.4E-05 38.1 27.2 103 38-141 15-160 (463)
352 3no0_A DNA gyrase subunit A; D 95.4 0.69 2.3E-05 36.0 20.4 205 80-310 25-246 (276)
353 3b7f_A Glycosyl hydrolase, BNR 94.8 1.4 4.8E-05 36.3 30.4 269 38-329 56-391 (394)
354 3q6k_A 43.2 kDa salivary prote 92.2 4.1 0.00014 33.3 20.1 135 15-150 123-306 (381)
355 3zwu_A Alkaline phosphatase PH 91.9 0.54 1.9E-05 40.9 7.7 62 281-342 477-552 (592)
356 3q6k_A 43.2 kDa salivary prote 91.1 5.5 0.00019 32.5 22.5 176 142-338 124-341 (381)
357 4a9v_A PHOX; hydrolase, beta-p 90.7 1.1 3.9E-05 38.6 8.3 63 280-342 476-552 (592)
358 4hvt_A Ritya.17583.B, post-pro 90.3 9.8 0.00034 34.2 23.8 227 80-336 130-411 (711)
359 4gq2_M Nucleoporin NUP120; bet 90.1 12 0.00043 34.9 19.0 38 281-318 237-274 (950)
360 1wp5_A Topoisomerase IV; broke 89.3 7.1 0.00024 31.1 18.9 184 129-337 3-211 (323)
361 1suu_A DNA gyrase subunit A; t 88.1 8.5 0.00029 30.5 28.3 195 46-259 6-233 (312)
362 3f7f_A Nucleoporin NUP120; nuc 87.8 2.6 9E-05 37.5 8.6 36 281-318 223-258 (729)
363 4gq2_M Nucleoporin NUP120; bet 87.6 19 0.00063 33.8 24.9 38 185-224 237-274 (950)
364 3b7f_A Glycosyl hydrolase, BNR 87.2 11 0.00038 30.8 26.0 68 78-146 54-143 (394)
365 3uc1_A DNA gyrase subunit A; D 87.0 10 0.00035 30.3 26.7 232 79-330 42-308 (327)
366 1wp5_A Topoisomerase IV; broke 84.8 13 0.00046 29.5 25.3 244 46-309 3-276 (323)
367 4fhn_B Nucleoporin NUP120; pro 84.2 3.6 0.00012 39.4 8.4 38 185-224 239-276 (1139)
368 1suu_A DNA gyrase subunit A; t 83.3 15 0.00052 29.0 23.6 206 88-310 6-231 (312)
369 2wg3_C Hedgehog-interacting pr 83.3 20 0.00068 30.3 27.8 52 79-130 14-79 (463)
370 3uc1_A DNA gyrase subunit A; D 83.3 16 0.00054 29.2 22.0 124 184-310 95-228 (327)
371 4fhn_B Nucleoporin NUP120; pro 82.8 2.9 0.0001 40.0 7.2 38 281-318 239-276 (1139)
372 1zi0_A DNA gyrase subunit A; b 82.0 17 0.00058 28.7 28.7 243 46-310 1-277 (307)
373 3f7f_A Nucleoporin NUP120; nuc 81.8 29 0.00098 31.1 14.5 36 122-159 224-259 (729)
374 3l6v_A GYRA, DNA gyrase subuni 80.6 22 0.00075 29.0 29.0 265 45-330 4-345 (370)
375 4a9v_A PHOX; hydrolase, beta-p 79.9 13 0.00044 32.3 9.2 59 79-137 476-548 (592)
376 3kci_A Probable E3 ubiquitin-p 76.7 30 0.001 28.3 26.5 228 14-258 71-346 (389)
377 3no0_A DNA gyrase subunit A; D 76.6 24 0.00083 27.3 21.9 165 120-310 24-196 (276)
378 3zwu_A Alkaline phosphatase PH 73.1 19 0.00066 31.5 8.7 58 185-244 477-548 (592)
379 1q47_A Semaphorin 3A; beta pro 69.0 25 0.00086 30.0 8.5 68 185-252 405-487 (495)
380 3kci_A Probable E3 ubiquitin-p 69.0 46 0.0016 27.2 27.6 210 80-309 106-344 (389)
381 1a12_A RCC1, regulator of chro 68.6 48 0.0017 27.3 20.7 160 79-257 164-365 (413)
382 4d9s_A UVB-resistance protein 63.4 62 0.0021 26.6 30.8 250 38-309 69-356 (406)
383 3al9_A Plexin-A2; beta-propell 61.9 31 0.0011 29.8 7.8 69 184-252 400-476 (539)
384 4gz8_A Semaphorin-3A; multi-do 61.7 82 0.0028 28.1 10.4 68 185-252 413-495 (667)
385 1zvt_A Topoisomerase IV subuni 60.5 54 0.0018 25.0 14.4 148 95-258 8-164 (256)
386 4hvt_A Ritya.17583.B, post-pro 60.0 99 0.0034 27.9 21.4 226 8-256 147-429 (711)
387 3l6v_A GYRA, DNA gyrase subuni 55.2 84 0.0029 25.6 27.3 209 87-310 4-265 (370)
388 1zi0_A DNA gyrase subunit A; b 53.0 81 0.0028 24.8 28.5 234 5-257 3-277 (307)
389 3mvd_K Regulator of chromosome 48.8 1.1E+02 0.0038 25.1 33.1 221 79-309 127-373 (423)
390 1sqj_A OXG-RCBH, oligoxylogluc 45.8 1.8E+02 0.0061 26.6 20.4 155 119-300 14-190 (789)
391 3mez_B Mannose-specific lectin 44.7 60 0.0021 20.8 9.6 26 82-108 59-84 (113)
392 3ol2_B Plexin-B1; beta-propell 43.7 1.2E+02 0.004 26.2 8.3 68 185-252 388-461 (528)
393 3al9_A Plexin-A2; beta-propell 37.6 55 0.0019 28.3 5.5 72 228-305 401-476 (539)
394 4d9s_A UVB-resistance protein 37.6 1.7E+02 0.0058 24.0 28.5 207 79-308 68-303 (406)
395 2zux_A YESW protein; beta-prop 36.4 2.2E+02 0.0074 24.9 22.9 57 181-237 361-424 (591)
396 4h3o_A Lectin; cadmium, plant 36.2 81 0.0028 19.9 10.4 79 40-137 21-99 (105)
397 1zvt_A Topoisomerase IV subuni 34.4 1.5E+02 0.0052 22.5 18.3 108 198-310 45-163 (256)
398 1q47_A Semaphorin 3A; beta pro 33.4 89 0.0031 26.6 6.0 75 228-305 405-487 (495)
399 3nvq_A Semaphorin-7A; beta-pro 33.3 2.2E+02 0.0075 25.0 8.4 55 198-252 381-444 (590)
400 3oky_B Putative uncharacterize 32.5 2.5E+02 0.0086 24.5 10.1 68 185-252 404-495 (565)
401 3oky_A Plexin-A2; transmembran 31.4 1.3E+02 0.0043 27.0 6.8 68 185-252 400-475 (681)
402 3nvn_B Plexin-C1; beta-propell 31.3 2.4E+02 0.0082 23.9 8.1 68 185-252 341-416 (476)
403 2zux_A YESW protein; beta-prop 30.0 2.8E+02 0.0096 24.2 20.8 42 277-318 361-408 (591)
404 4gz8_A Semaphorin-3A; multi-do 28.2 78 0.0027 28.2 5.0 28 278-305 468-495 (667)
405 1olz_A Semaphorin 4D; developm 25.1 3.3E+02 0.011 24.3 8.4 68 185-252 398-477 (663)
406 3ol2_B Plexin-B1; beta-propell 23.1 1.4E+02 0.0048 25.7 5.5 70 229-305 389-461 (528)
407 1sqj_A OXG-RCBH, oligoxylogluc 20.9 4.8E+02 0.016 23.8 25.0 59 78-137 14-82 (789)
408 1zvu_A Topoisomerase IV subuni 20.5 4.8E+02 0.016 23.6 12.9 197 88-305 470-683 (716)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8e-52 Score=335.13 Aligned_cols=279 Identities=15% Similarity=0.161 Sum_probs=250.1
Q ss_pred eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867 26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW 104 (343)
Q Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~ 104 (343)
+..+++++|.+ .|.+++|+|++.++++++.||.|++||+.+++.+..+..|..+|.+++|+|++++|++ +.|+.|++|
T Consensus 4 ~~~~~~~~h~~-~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSD-RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eeEEeecCCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 45678999999 9999999999999999999999999999999888888899999999999999999987 689999999
Q ss_pred EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867 105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184 (343)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
|+.+++.+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++++.. ....+.+|..
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---------------------~~~~~~~h~~ 141 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---------------------LEQTFEGHEH 141 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---------------------EEEEECCCCS
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---------------------hhhhhcccCC
Confidence 9999999999999999999999999999999999999999999987532 4456678999
Q ss_pred ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcC--CCCEEEEEcCCCcEEEEEeecccc
Q psy10867 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDG--TEDNIYMGTSEGVIKSFCLRQVPR 260 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~ 260 (343)
.|.+++|+|.+. .+|++++.|++|++||+++++....+. +...+..+.|+| ++++|++|+.|+.|++||+++...
T Consensus 142 ~v~~v~~~p~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 142 FVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp CEEEEEECTTCT-TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred cEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 999999999432 799999999999999998887766654 456799999987 678999999999999999987543
Q ss_pred cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCC--eeee
Q psy10867 261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPP--AIHD 337 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~--~l~~ 337 (343)
+..+.+|...|.+++|+|++++|++|+.||.|++||+.+++++.++. +...+.+++|+|++. ++++
T Consensus 221 -----------~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as 289 (304)
T 2ynn_A 221 -----------VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIAS 289 (304)
T ss_dssp -----------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEE
T ss_pred -----------ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEE
Confidence 55678999999999999999999999999999999999999999998 888999999999986 3555
Q ss_pred c
Q psy10867 338 Y 338 (343)
Q Consensus 338 ~ 338 (343)
+
T Consensus 290 g 290 (304)
T 2ynn_A 290 G 290 (304)
T ss_dssp E
T ss_pred e
Confidence 4
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-51 Score=345.86 Aligned_cols=278 Identities=17% Similarity=0.254 Sum_probs=256.6
Q ss_pred EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867 28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI 106 (343)
Q Consensus 28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~ 106 (343)
...+.+|.. +|++++|+|++.++++++.||.|++||+.+++....+.+|.+.|.+++|+|++++|++ +.|+.|++||+
T Consensus 101 ~~~l~gh~~-~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSS-CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 456788998 9999999999999999999999999999999988888899999999999999999987 68999999999
Q ss_pred cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867 107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV 186 (343)
Q Consensus 107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (343)
.+++++..+.+|...|.+++|+|++++|++|+.|+.|++||++++. .+..+.+|...|
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~----------------------~~~~~~~h~~~v 237 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY----------------------CVKTFTGHREWV 237 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC----------------------EEEEEECCSSCE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----------------------EEEEEeCCCccE
Confidence 9999999999999999999999999999999999999999999864 445567899999
Q ss_pred EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCC--------------------CCEEEEEc
Q psy10867 187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGT--------------------EDNIYMGT 245 (343)
Q Consensus 187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~--------------------~~~l~~~~ 245 (343)
.++.++|++ .++++++.|+.|++||+++++....+. |...|.+++|+|+ +.+|++|+
T Consensus 238 ~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 238 RMVRPNQDG--TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp EEEEECTTS--SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred EEEEECCCC--CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 999999999 899999999999999999999888776 7888999999996 67899999
Q ss_pred CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867 246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324 (343)
Q Consensus 246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~ 324 (343)
.|+.|++||+++... +..+.+|...|++++|+|++++|++++.||.|++||+.+++++..+. |...|+
T Consensus 316 ~D~~i~iwd~~~~~~-----------~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~ 384 (410)
T 1vyh_C 316 RDKTIKMWDVSTGMC-----------LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384 (410)
T ss_dssp TTSEEEEEETTTTEE-----------EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEE
T ss_pred CCCeEEEEECCCCce-----------EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE
Confidence 999999999987543 45677899999999999999999999999999999999999999998 999999
Q ss_pred EEEEccCCCeeeecccC
Q psy10867 325 GAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 325 ~~~~sp~~~~l~~~~~~ 341 (343)
+++|+|++++|++++..
T Consensus 385 ~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 385 SLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp EEEECSSSSCEEEEETT
T ss_pred EEEEcCCCCEEEEEeCC
Confidence 99999999999998754
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.7e-50 Score=354.39 Aligned_cols=297 Identities=15% Similarity=0.174 Sum_probs=239.4
Q ss_pred ecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC
Q psy10867 32 KGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG 109 (343)
Q Consensus 32 ~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~ 109 (343)
.+|.. .|.+++|+|++. .+++++.|++|++||..+++....+.+|...|.+++|+|++++|++ +.|++|++||+.++
T Consensus 144 ~gh~~-~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 144 TGQAR-AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CCCSS-CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cCCCC-CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 34555 666777777664 5777777899999999888888888899999999999999999997 78999999999999
Q ss_pred ceEEEec-------ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC--------CCc------
Q psy10867 110 RLLATAS-------SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS--------GKG------ 168 (343)
Q Consensus 110 ~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------~~~------ 168 (343)
+.+..+. +|.+.|.+++|+|++++|++++.|++|++||+++++....+........ +..
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~ 302 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 302 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEET
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeC
Confidence 9888884 7999999999999999999999999999999998877666542210000 000
Q ss_pred -------cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe------------------
Q psy10867 169 -------VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL------------------ 223 (343)
Q Consensus 169 -------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------------------ 223 (343)
.....+....+.+|...|.+++|+|++ ++|++++.|++|++||+.+++....+
T Consensus 303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg--~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADG--KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD 380 (611)
T ss_dssp TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC
T ss_pred CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC--CEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCc
Confidence 001112456677899999999999999 89999999999999998876432211
Q ss_pred -----------------------------------------------------------------ecCCcEEEEEEcCCC
Q psy10867 224 -----------------------------------------------------------------ILDTRLTCVAFDGTE 238 (343)
Q Consensus 224 -----------------------------------------------------------------~~~~~i~~~~~~~~~ 238 (343)
.+...+.+++|+|++
T Consensus 381 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg 460 (611)
T 1nr0_A 381 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDK 460 (611)
T ss_dssp EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTS
T ss_pred EEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCC
Confidence 112346789999999
Q ss_pred CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc-ceeeee-
Q psy10867 239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS-RQCLRT- 316 (343)
Q Consensus 239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~- 316 (343)
++|++|+.|+.|++||+....... ... .+|...|++++|+|++++|++++.|+.|++||+.+ ++++..
T Consensus 461 ~~lasgs~D~~v~lwd~~~~~~~~---------~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~ 530 (611)
T 1nr0_A 461 QFVAVGGQDSKVHVYKLSGASVSE---------VKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN 530 (611)
T ss_dssp CEEEEEETTSEEEEEEEETTEEEE---------EEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC
T ss_pred CEEEEeCCCCeEEEEEccCCceee---------eec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeee
Confidence 999999999999999997642110 122 57899999999999999999999999999999988 666654
Q ss_pred -cc-cCCceEEEEEccCCCeeeecccC
Q psy10867 317 -IQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 317 -~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
+. |...|.+++|+|||++|++++..
T Consensus 531 ~~~~H~~~V~~v~fspdg~~lasgs~D 557 (611)
T 1nr0_A 531 SWTFHTAKVACVSWSPDNVRLATGSLD 557 (611)
T ss_dssp CCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeecccceeEEEECCCCCEEEEEECC
Confidence 34 89999999999999999998764
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=330.47 Aligned_cols=281 Identities=17% Similarity=0.239 Sum_probs=251.3
Q ss_pred ceEEEEEecCCCCcceEEEEeCC----ceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECCCCCEEEE-ec
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGN----DYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASPDAAYIAV-SI 97 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~-~~ 97 (343)
+...+.+++|.+ .|.+++|+|+ +.++++|+.|++|++|++..++.. ..+.+|...|.+++|+|++.++++ +.
T Consensus 22 g~~~~~~~~H~~-~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 22 GILFKQEQAHDD-AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 100 (321)
T ss_dssp EEEEEETTSSSS-CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred hheeeecccCCC-cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC
Confidence 455667789999 9999999975 568899998899999998776543 456799999999999999999997 68
Q ss_pred CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867 98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++|+++++. ...
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~----------------------~~~ 158 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK----------------------KEY 158 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS----------------------EEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc----------------------eeE
Confidence 9999999999999999999999999999999999999999999999999998864 344
Q ss_pred eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 256 (343)
.+..|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+. +..+|.+++|+|++++|++|+.|+.|++||++
T Consensus 159 ~~~~~~~~v~~~~~spdg--~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp EEECSSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred EecCCCceEEEEEECCCC--CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence 456788899999999999 899999999999999999999988887 67889999999999999999999999999998
Q ss_pred cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCee
Q psy10867 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAI 335 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l 335 (343)
.... ...+.+|...|.+++|+|++++|++++.|+.|++||+.+++++.++. |.+.|.+++|+|++++|
T Consensus 237 ~~~~-----------~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 237 HANL-----------AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp TCCE-----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred Ccce-----------eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 6433 44677899999999999999999999999999999999999999998 99999999999999999
Q ss_pred eecccC
Q psy10867 336 HDYDFT 341 (343)
Q Consensus 336 ~~~~~~ 341 (343)
++++..
T Consensus 306 ~s~~~d 311 (321)
T 3ow8_A 306 VSVGDD 311 (321)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 998754
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-51 Score=339.60 Aligned_cols=297 Identities=17% Similarity=0.172 Sum_probs=231.3
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC------CCeEEEEeCCCcccc----eecc
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG------KPMIQAWPVNSQEKA----QLRL 75 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~iw~~~~~~~~----~~~~ 75 (343)
.+.+.++++.....|++.... ...|+. .|.+++|+|||++|++++. |+.+++|+..++... ....
T Consensus 17 ~~~~~~~g~~~~~~w~~p~~~----p~~H~~-~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~ 91 (357)
T 4g56_B 17 NLYFQSNGSSKGSAWGRPVTA----PACMEV-QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGV 91 (357)
T ss_dssp ---------------------------CCCS-EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEE
T ss_pred ceEEecCCCccccccCCCCCC----cccccC-CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccC
Confidence 456777778888999875433 357888 9999999999999999987 678999998776543 2234
Q ss_pred cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEE----EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867 76 ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLA----TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 76 ~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
.|...|.+++|+|++++++++.|+.|++||+.+++... ...+|.+.|.+++|+|++++|++|+.|+.|++||++++
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~ 171 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK 171 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 68889999999999999999999999999998886543 34479999999999999999999999999999999986
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCc
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTR 228 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~ 228 (343)
+ .+..+.+|...|++++|+|+++ .++++++.|+.|++||+++++....+. +...
T Consensus 172 ~----------------------~~~~~~~h~~~v~~v~~s~~~~-~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 172 A----------------------VLKSYNAHSSEVNCVAACPGKD-TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp E----------------------EEEEECCCSSCEEEEEECTTCS-SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred c----------------------EEEEEcCCCCCEEEEEEccCCC-ceeeeeccCCceEEEECCCCceeeeeeecccccc
Confidence 4 4556678999999999999874 588999999999999999988776554 4667
Q ss_pred EEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEE
Q psy10867 229 LTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIW 306 (343)
Q Consensus 229 i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw 306 (343)
+.+++|+|++ .+|++|+.|+.|++||+++... +..+.+|...|++++|+|++ ++||+|+.|++|+||
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~-----------~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS-----------AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESSCGGG-----------CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred ccchhhhhcccceEEEeecccceeEEECCCCcE-----------eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 9999999974 6888999999999999987544 45677899999999999987 589999999999999
Q ss_pred ecccceeeeecccCCceEEEEEcc-CCCeeeecccC
Q psy10867 307 HTISRQCLRTIQHKGPVLGAFLGL-LPPAIHDYDFT 341 (343)
Q Consensus 307 d~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~ 341 (343)
|+++++++..+.|.+.|++++|+| ++++|++++..
T Consensus 298 d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 298 DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 999999998888999999999999 79999998764
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.6e-51 Score=343.06 Aligned_cols=270 Identities=21% Similarity=0.305 Sum_probs=244.3
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ 85 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 85 (343)
.++++++.||.|+|||+.+++....+++|.. .|.+++|+|++.++++++.|++|++||+.+++.+..+.+|...|.+++
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~ 199 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS 199 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEE
Confidence 3444555589999999999999999999999 999999999999999999999999999999998888889999999999
Q ss_pred ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867 86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
|+|++.+|++ +.|+.|++||+.++.++..+.+|...|.++.|+|++++|++|+.|+.|++||+.+..
T Consensus 200 ~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~------------ 267 (410)
T 1vyh_C 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE------------ 267 (410)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC------------
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------------
Confidence 9999998887 789999999999999999999999999999999999999999999999999998864
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCC------------------ceEEEEeeCCCeEEEEecCCCceEEEee-c
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA------------------KSRVASVSHDRTCKIFDLCTGEDLLSLI-L 225 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~ 225 (343)
....+.+|...|.+++|+|++. +.++++|+.|+.|++||+++++.+..+. |
T Consensus 268 ----------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 268 ----------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp ----------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ----------eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 4455678999999999999631 2689999999999999999999988887 7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867 226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI 305 (343)
Q Consensus 226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 305 (343)
...|.+++|+|++++|++|+.|+.|++||+.+... +..+.+|...|++++|+|++.+|++|+.||.|++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~-----------~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~v 406 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-----------MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC-----------CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-----------EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 78899999999999999999999999999876433 5567889999999999999999999999999999
Q ss_pred Eecc
Q psy10867 306 WHTI 309 (343)
Q Consensus 306 wd~~ 309 (343)
|+++
T Consensus 407 W~~r 410 (410)
T 1vyh_C 407 WECR 410 (410)
T ss_dssp EC--
T ss_pred EeCC
Confidence 9863
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.7e-50 Score=353.86 Aligned_cols=320 Identities=17% Similarity=0.204 Sum_probs=255.4
Q ss_pred EEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-------cCCcc
Q psy10867 8 AFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------ICPGR 80 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------~~~~~ 80 (343)
+++++.|+.|++||..+++++..+.+|.. .|.+++|+|++.++++++.|++|++||+.+++....+. +|.+.
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~~H~~-~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFGEHTK-FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred EEEEeCCCeEEEEECCCCeEeeeeccccC-ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence 44555589999999999999999999999 99999999999999999999999999999888776553 79999
Q ss_pred eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEE-------------------------------------------Eec
Q psy10867 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLA-------------------------------------------TAS 116 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~-------------------------------------------~~~ 116 (343)
|.+++|+|++++|++ +.|++|++||+.+++.+. .+.
T Consensus 242 V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~ 321 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY 321 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc
Confidence 999999999999997 789999999998776543 345
Q ss_pred ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC--------CCC------------------Ccc-
Q psy10867 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG--------SSG------------------KGV- 169 (343)
Q Consensus 117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~~~------------------~~~- 169 (343)
+|...|.+++|+|++++|++++.|+.|++||+.++.....+...... ..+ ...
T Consensus 322 gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~ 401 (611)
T 1nr0_A 322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVD 401 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSC
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccc
Confidence 78999999999999999999999999999999876543322100000 000 000
Q ss_pred --------------------cc------c--------cceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867 170 --------------------TG------L--------TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC 215 (343)
Q Consensus 170 --------------------~~------~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 215 (343)
.. . ...+..+ .|...+.+++|+|++ ++|++|+.|++|++||+.
T Consensus 402 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg--~~lasgs~D~~v~lwd~~ 478 (611)
T 1nr0_A 402 SSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDK--QFVAVGGQDSKVHVYKLS 478 (611)
T ss_dssp TTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTS--CEEEEEETTSEEEEEEEE
T ss_pred ccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCC--CEEEEeCCCCeEEEEEcc
Confidence 00 0 0001111 255678999999999 899999999999999998
Q ss_pred CCce--EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867 216 TGED--LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT 293 (343)
Q Consensus 216 ~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 293 (343)
+++. .....|...|.+++|+|++++|++++.|+.|++||+........ ...+.+|...|++++|+||+++
T Consensus 479 ~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~--------~~~~~~H~~~V~~v~fspdg~~ 550 (611)
T 1nr0_A 479 GASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH--------TNSWTFHTAKVACVSWSPDNVR 550 (611)
T ss_dssp TTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC--------CCCCCCCSSCEEEEEECTTSSE
T ss_pred CCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceee--------eeeeeecccceeEEEECCCCCE
Confidence 7653 33445888999999999999999999999999999976221110 1123459999999999999999
Q ss_pred EEEEeCCCcEEEEecccce-ee-eecc-c-CCceEEEEEccCCCeeeeccc
Q psy10867 294 LLSSSADETLKIWHTISRQ-CL-RTIQ-H-KGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 294 l~s~~~dg~i~iwd~~~~~-~~-~~~~-~-~~~v~~~~~sp~~~~l~~~~~ 340 (343)
||+++.|++|++||+.+++ .+ ..+. | ...|.+++|+|+++ |++++.
T Consensus 551 lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~ 600 (611)
T 1nr0_A 551 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQ 600 (611)
T ss_dssp EEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEET
T ss_pred EEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecC
Confidence 9999999999999998765 33 4555 7 79999999999999 888764
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-49 Score=327.78 Aligned_cols=282 Identities=15% Similarity=0.184 Sum_probs=251.1
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM 103 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v 103 (343)
.+...++.+|.. .|.+++|+|++.++++++.||.|++||..+++.+..+..|...|.+++|+|++++|++ +.|+.|++
T Consensus 45 ~~~~~~l~gH~~-~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 45 MRTRRTLRGHLA-KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred chhheeecCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 456788999999 9999999999999999999999999999999888888889999999999999999997 68999999
Q ss_pred EEccCC----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 104 WQISSG----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 104 ~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
|++.++ .....+.+|.+.|.++.|++++. +++++.|+.|++||++++. ....+
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~----------------------~~~~~ 180 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ----------------------QTTTF 180 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE----------------------EEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc----------------------EEEEE
Confidence 999875 35567889999999999998765 8899999999999998864 45566
Q ss_pred cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 258 (343)
.+|...|.+++|+|++ .++++++.|+.|++||+++++....+. |...|.+++|+|++++|++|+.|+.|++||++..
T Consensus 181 ~~h~~~v~~~~~~~~~--~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 181 TGHTGDVMSLSLAPDT--RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp CCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCCceEEEEECCCC--CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 7899999999999998 899999999999999999999888887 7888999999999999999999999999999875
Q ss_pred cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867 259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~ 337 (343)
.....+ ....+...|++++|+|++++|++|+.|+.|++||+.+++.+..+. |.++|.+++|+|++++|++
T Consensus 259 ~~~~~~---------~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 259 QELMTY---------SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp EEEEEE---------CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred cEEEEE---------ccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 432211 112334579999999999999999999999999999999999888 9999999999999999999
Q ss_pred cccC
Q psy10867 338 YDFT 341 (343)
Q Consensus 338 ~~~~ 341 (343)
++..
T Consensus 330 ~s~D 333 (340)
T 1got_B 330 GSWD 333 (340)
T ss_dssp EETT
T ss_pred EcCC
Confidence 9864
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.5e-50 Score=329.99 Aligned_cols=265 Identities=18% Similarity=0.295 Sum_probs=238.5
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc----cceecccCCcceE
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE----KAQLRLICPGRIS 82 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~ 82 (343)
++++++.||.|++||..+++.+..+..|.. .|.+++|+|++.++++++.|+.+++|++.+.+ ....+.+|.+.|.
T Consensus 69 ~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~ 147 (340)
T 1got_B 69 LLLSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS 147 (340)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE
T ss_pred EEEEEeCCCcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE
Confidence 344455589999999999999999999998 99999999999999999999999999998753 2345668999999
Q ss_pred EEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867 83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP 162 (343)
Q Consensus 83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 162 (343)
++.|++++.+++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++++++|+.|+.|++||++++.
T Consensus 148 ~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---------- 217 (340)
T 1got_B 148 CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---------- 217 (340)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS----------
T ss_pred EEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----------
Confidence 9999999887777899999999999999999999999999999999999999999999999999998864
Q ss_pred CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---CcEEEEEEcCCCC
Q psy10867 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---TRLTCVAFDGTED 239 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~i~~~~~~~~~~ 239 (343)
....+.+|...|.+++|+|++ .+|++++.|++|++||+++++.+..+.+. ..+.+++|+|+++
T Consensus 218 ------------~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 218 ------------CRQTFTGHESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp ------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred ------------eEEEEcCCcCCEEEEEEcCCC--CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 445567899999999999999 89999999999999999999888777654 3699999999999
Q ss_pred EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
+|++|+.|+.|++||+..... +..+.+|...|++++|+|++++|++|+.|+.|++||
T Consensus 284 ~l~~g~~d~~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 284 LLLAGYDDFNCNVWDALKADR-----------AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTSEEEEEETTTCCE-----------EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCeEEEEEcccCcE-----------eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999876443 456789999999999999999999999999999997
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.8e-50 Score=326.21 Aligned_cols=268 Identities=19% Similarity=0.271 Sum_probs=243.6
Q ss_pred eEEEecCCCCeEEEEecCCceE--EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTL--LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS 83 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~ 83 (343)
.++++++.|++|+|||+.+++. ...+.+|.. .|.+++|+|++.++++++.|++|++||+.+++.+..+..+...+.+
T Consensus 49 ~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~-~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 127 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL-GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 127 (321)
T ss_dssp CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCC
T ss_pred CEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEE
Confidence 3566777899999999977654 557899999 9999999999999999999999999999999988888888889999
Q ss_pred EEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867 84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP 162 (343)
Q Consensus 84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 162 (343)
++|+|++++|++ +.++.|++|++++++....+..|...|.+++|+|++++|++|+.||.|++||+++++
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---------- 197 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---------- 197 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----------
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc----------
Confidence 999999999997 578999999999999999999999999999999999999999999999999998864
Q ss_pred CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEE
Q psy10867 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNI 241 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l 241 (343)
.+..+.+|..+|.+++|+|++ .+|++++.|+.|++||+++++....+. |...|.+++|+|++++|
T Consensus 198 ------------~~~~~~~h~~~v~~l~~spd~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 198 ------------LLHTLEGHAMPIRSLTFSPDS--QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp ------------EEEEECCCSSCCCEEEECTTS--CEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ------------EEEEEcccCCceeEEEEcCCC--CEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence 455667899999999999999 899999999999999999999888877 77889999999999999
Q ss_pred EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
++++.|+.|++||+.+... +..+.+|...|.+++|+|++++|++++.||.|++||..
T Consensus 264 ~s~s~D~~v~iwd~~~~~~-----------~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTC-----------VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTSCEEEEETTTTEE-----------EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEeCCCcEEEEeCCCCEE-----------EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999987543 45677899999999999999999999999999999963
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.7e-50 Score=329.00 Aligned_cols=284 Identities=16% Similarity=0.144 Sum_probs=229.4
Q ss_pred EEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-----------ccceecccCCcceEEEE
Q psy10867 17 ISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-----------EKAQLRLICPGRISSMQ 85 (343)
Q Consensus 17 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-----------~~~~~~~~~~~~v~~~~ 85 (343)
.+.|++....+ ..+.. .|.+++|+|||++++++++ +++++||.... ........+...|.+++
T Consensus 16 ~r~w~~~~~~~----~~~~~-~v~~~~fs~dG~~l~~~sd-~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (344)
T 4gqb_B 16 AREWNLPPNAP----ACMER-QLEAARYRSDGALLLGASS-LSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT 89 (344)
T ss_dssp -------CCSC----SSCCS-EEEEEEECTTSCEEEEEEC-CSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred ccccCCCCCCc----ccccC-CEEEEEECCCCCEEEEEeC-CceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence 45677654332 34566 8999999999999999885 78888873211 11112224567899999
Q ss_pred ECCCCCEEEEecCCeEEEEEccCCceEEE----ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867 86 ASPDAAYIAVSIETKLHMWQISSGRLLAT----ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
|+|++.+++++.||.|+|||+.+++.+.. +.+|.+.|++++|+|++++|++|+.|+.|++||+++++
T Consensus 90 ~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--------- 160 (344)
T 4gqb_B 90 WVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--------- 160 (344)
T ss_dssp EETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------
T ss_pred EeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc---------
Confidence 99998877778999999999998875433 44899999999999999999999999999999999864
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCC-
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGT- 237 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~- 237 (343)
.+..+.+|...|.+++|+|++. .++++++.|++|++||+++++....+. +...+.+++|+|+
T Consensus 161 -------------~~~~~~~h~~~V~~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (344)
T 4gqb_B 161 -------------VLSSYRAHAAQVTCVAASPHKD-SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ 226 (344)
T ss_dssp -------------EEEEECCCSSCEEEEEECSSCT-TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred -------------EEEEEcCcCCceEEEEecCCCC-CceeeeccccccccccccccceeeeeecceeeccceeeeecCCC
Confidence 5566778999999999999985 588999999999999999999888775 3456999999995
Q ss_pred CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC-CEEEEEeCCCcEEEEecccceeeee
Q psy10867 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG-ITLLSSSADETLKIWHTISRQCLRT 316 (343)
Q Consensus 238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~ 316 (343)
+++|++|+.||.|++||+++.+. +..+.+|...|++++|+|++ ++|++|+.|++|++||+.+++++..
T Consensus 227 ~~~l~sg~~dg~v~~wd~~~~~~-----------~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 227 SEVFVFGDENGTVSLVDTKSTSC-----------VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp TTEEEEEETTSEEEEEESCC--C-----------CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CcceEEeccCCcEEEEECCCCcE-----------EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 56889999999999999987543 56788999999999999998 5899999999999999999987765
Q ss_pred cccCCceEEEEEccCCCee-eeccc
Q psy10867 317 IQHKGPVLGAFLGLLPPAI-HDYDF 340 (343)
Q Consensus 317 ~~~~~~v~~~~~sp~~~~l-~~~~~ 340 (343)
..|.+.|++++|+|+++.| ++++.
T Consensus 296 ~~H~~~V~~v~~sp~~~~llas~s~ 320 (344)
T 4gqb_B 296 QAHRDFVRDATWSPLNHSLLTTVGW 320 (344)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEET
T ss_pred cCCCCCEEEEEEeCCCCeEEEEEcC
Confidence 5599999999999999865 46654
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.9e-49 Score=325.82 Aligned_cols=285 Identities=14% Similarity=0.172 Sum_probs=250.2
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM 103 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v 103 (343)
.+...++++|.. .|.+++|+|++.++++++.||+|++||..+++....+..|...|.+++|+|++.+|++ +.|+.+++
T Consensus 54 ~~~~~~l~gH~~-~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 54 MKTRRTLKGHGN-KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp CCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred cEEEEEecCCCC-eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 356788999999 9999999999999999999999999999988888777788899999999999999997 68999999
Q ss_pred EEccCC------ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867 104 WQISSG------RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 104 ~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
|++... .....+.+|.+.|.+++|+|++..|++++.|++|++||+++++ .+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~----------------------~~~ 190 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ----------------------LLQ 190 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC----------------------EEE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe----------------------EEE
Confidence 998643 3345677899999999999999999999999999999998864 455
Q ss_pred eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 256 (343)
.+.+|...|.+++++|+..+.+|++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.|+.|++||++
T Consensus 191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 66789999999999885433799999999999999999999988886 78889999999999999999999999999998
Q ss_pred cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCee
Q psy10867 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAI 335 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l 335 (343)
.......+ ....+...+.+++|+|++++|++++.|+.|++||+.+++.+..+. |.+.|++++|+|++++|
T Consensus 271 ~~~~~~~~---------~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l 341 (354)
T 2pbi_B 271 ADREVAIY---------SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF 341 (354)
T ss_dssp TTEEEEEE---------CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCE
T ss_pred CCcEEEEE---------cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEE
Confidence 65332211 111234578999999999999999999999999999999988887 99999999999999999
Q ss_pred eecccC
Q psy10867 336 HDYDFT 341 (343)
Q Consensus 336 ~~~~~~ 341 (343)
++++..
T Consensus 342 ~sgs~D 347 (354)
T 2pbi_B 342 CSGSWD 347 (354)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 999864
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.1e-48 Score=339.41 Aligned_cols=290 Identities=24% Similarity=0.356 Sum_probs=256.4
Q ss_pred EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867 9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP 88 (343)
Q Consensus 9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~ 88 (343)
++++.|+.|++||. +++.+..+.+|.. .|.+++|+|++.++++++.|+.|++||..... ...+..|...|.+++|+|
T Consensus 278 ~~~~~d~~i~~w~~-~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~~~~~~v~~~~~s~ 354 (577)
T 2ymu_A 278 ASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQTLTGHSSSVWGVAFSP 354 (577)
T ss_dssp EEEETTSCEEEEET-TSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSCE-EEEECCCSSCEEEEEECT
T ss_pred EEEeCCCEEEEEeC-CCcEEEEEecCCC-CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEEEeCCCCCEEEEEECC
Confidence 34444899999996 6788889999999 99999999999999999989999999987654 455668999999999999
Q ss_pred CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867 89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK 167 (343)
Q Consensus 89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 167 (343)
++++|++ +.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||....
T Consensus 355 ~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~---------------- 417 (577)
T 2ymu_A 355 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------------- 417 (577)
T ss_dssp TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC----------------
T ss_pred CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC----------------
Confidence 9999997 67899999995 67888899999999999999999999999999999999996542
Q ss_pred ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcC
Q psy10867 168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTS 246 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~ 246 (343)
.+..+.+|...|.+++|+|++ .+|++++.|+.|++||. +++.+..+. |...+.+++|+|++++|++++.
T Consensus 418 -------~~~~~~~~~~~v~~~~~s~d~--~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 418 -------LLQTLTGHSSSVWGVAFSPDD--QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp -------EEEEEECCSSCEEEEEECTTS--SEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred -------EEEEecCCCCCeEEEEECCCC--CEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 556677899999999999999 89999999999999996 556666655 7889999999999999999999
Q ss_pred CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEE
Q psy10867 247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLG 325 (343)
Q Consensus 247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~ 325 (343)
|+.|++||... ..+..+.+|...|++++|+|++++|++++.||.|++||. +++++.++. |.+.|++
T Consensus 488 d~~i~iw~~~~------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~ 554 (577)
T 2ymu_A 488 DKTVKLWNRNG------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG 554 (577)
T ss_dssp TSEEEEEETTS------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEE
T ss_pred CCEEEEEcCCC------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEE
Confidence 99999999532 225567889999999999999999999999999999995 688888888 9999999
Q ss_pred EEEccCCCeeeecccC
Q psy10867 326 AFLGLLPPAIHDYDFT 341 (343)
Q Consensus 326 ~~~sp~~~~l~~~~~~ 341 (343)
++|+||+++|++++..
T Consensus 555 ~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 555 VAFSPDGQTIASASSD 570 (577)
T ss_dssp EEECTTSSCEEEEETT
T ss_pred EEEcCCCCEEEEEeCC
Confidence 9999999999998753
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=320.87 Aligned_cols=275 Identities=12% Similarity=0.112 Sum_probs=220.9
Q ss_pred ccceEEEecCC-------CCeEEEEecCC-----------ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe
Q psy10867 3 LLNEVAFSYDG-------SGAISVWEPKG-----------GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP 64 (343)
Q Consensus 3 ~v~~~~~s~~~-------dg~i~iwd~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~ 64 (343)
.|.++.|+++| |+++++||... .........+.. .|.+++|+|++.+++++ .||+|+|||
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~d~~l~~~s-~dg~v~lWd 109 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA-GVADLTWVGERGILVAS-DSGAVELWE 109 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESS-CEEEEEEETTTEEEEEE-TTSEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCC-CEEEEEEeCCCeEEEEE-CCCEEEEEe
Confidence 46778888877 56667776321 111112223445 79999999998766554 559999999
Q ss_pred CCCccccee----cccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEec
Q psy10867 65 VNSQEKAQL----RLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGG 138 (343)
Q Consensus 65 ~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~ 138 (343)
+.+++.... ..+|.+.|.+++|+|++++|++ +.|+.|++||+.+++++..+.+|.+.|.+++|+|++. +|++++
T Consensus 110 ~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 110 LDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp ECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred ccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeec
Confidence 998876533 3479999999999999999997 6899999999999999999999999999999999875 789999
Q ss_pred CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867 139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE 218 (343)
Q Consensus 139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 218 (343)
.|+.|++||+++++....+. ...+...+.+++|+|++. .++++|+.|+.|++||+++++
T Consensus 190 ~D~~v~iwd~~~~~~~~~~~--------------------~~~~~~~~~~~~~~p~~~-~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 190 EDNRILLWDTRCPKPASQIG--------------------CSAPGYLPTSLAWHPQQS-EVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp TTSCEEEEETTSSSCEEECC------------------------CCCEEEEEECSSCT-TEEEEEETTSEEEEEESCC--
T ss_pred cccccccccccccceeeeee--------------------cceeeccceeeeecCCCC-cceEEeccCCcEEEEECCCCc
Confidence 99999999999875443321 134566789999999764 789999999999999999999
Q ss_pred eEEEee-cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEE
Q psy10867 219 DLLSLI-LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLL 295 (343)
Q Consensus 219 ~~~~~~-~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 295 (343)
.+..+. |...|.+++|+|++ ++|++|+.|+.|++||++..+ +..+.+|.+.|++++|+|+++ +|+
T Consensus 249 ~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~------------~~~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 249 CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE------------LFRSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE------------EEEECCCSSCEEEEEECSSSTTEEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc------------EEEEcCCCCCEEEEEEeCCCCeEEE
Confidence 998887 78889999999998 578999999999999987643 234678999999999999986 577
Q ss_pred EEeCCCcEEEEecccce
Q psy10867 296 SSSADETLKIWHTISRQ 312 (343)
Q Consensus 296 s~~~dg~i~iwd~~~~~ 312 (343)
+++.|++|++|++.+..
T Consensus 317 s~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 317 TVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEETTSCEEEEECCC--
T ss_pred EEcCCCeEEEEECCCCC
Confidence 99999999999997643
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-47 Score=316.38 Aligned_cols=265 Identities=20% Similarity=0.273 Sum_probs=234.7
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc------ccceecccCCcc
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ------EKAQLRLICPGR 80 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~------~~~~~~~~~~~~ 80 (343)
.++|++.||.|++||..+++....+..|.. .|.+++|+|++.++++++.|+.+++|++... .....+..|...
T Consensus 78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~-~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~ 156 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSFTTNKEHAVTMPCT-WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNY 156 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSS-CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSC
T ss_pred EEEEEeCCCeEEEEECCCCCcceEEecCCC-CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCc
Confidence 344455589999999999999999999988 9999999999999999999999999998643 223455689999
Q ss_pred eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeee
Q psy10867 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTV 157 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 157 (343)
|.+++|+|++..|++ +.|++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.||.|++||++++.
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~----- 231 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ----- 231 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC-----
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc-----
Confidence 999999999988876 7899999999999999999999999999999987 56899999999999999999864
Q ss_pred ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEE
Q psy10867 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAF 234 (343)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~ 234 (343)
.+..+..|...|.+++|+|++ .+|++++.|++|++||+++++.+..+.. ...+.+++|
T Consensus 232 -----------------~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 232 -----------------CVQAFETHESDVNSVRYYPSG--DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp -----------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred -----------------EEEEecCCCCCeEEEEEeCCC--CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 445567899999999999999 8999999999999999999887776653 346899999
Q ss_pred cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
+|++++|++|+.|+.|++||+.+... +..+.+|...|++++|+|++++|++|+.|+.|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~-----------~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSR-----------VSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCce-----------EEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999876443 445778999999999999999999999999999996
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-47 Score=312.03 Aligned_cols=280 Identities=22% Similarity=0.313 Sum_probs=248.1
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM 103 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v 103 (343)
.....++.+|.. .|.+++|+|++.++++++.||.|++|+..+++....+..|...|.+++|+|++++|++ +.|+.|++
T Consensus 13 ~~~~~~~~gh~~-~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceeEEEEcccCC-cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 456778899999 9999999999999999999999999999999888888899999999999999999987 68999999
Q ss_pred EEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867 104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS 183 (343)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
||+++++.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++ ....+..|.
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----------------------~~~~~~~~~ 149 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK----------------------CLKTLPAHS 149 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC----------------------EEEEECCCS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE----------------------EEEEecCCC
Confidence 9999999999999999999999999999999999999999999998864 445566799
Q ss_pred cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867 184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT 261 (343)
Q Consensus 184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 261 (343)
.+|.+++|+|++ .++++++.|+.|++||+++++.+..+. +...+..++|+|++++|++++.|+.|++||++.....
T Consensus 150 ~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 150 DPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp SCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CcEEEEEEcCCC--CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 999999999998 899999999999999999998887764 4567999999999999999999999999999875432
Q ss_pred ccccccCCCCCCccccccCcE---EEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeee
Q psy10867 262 RDHHIQDSTSNPDFIGHEKQV---TSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~ 337 (343)
..+.+|.... ......+++.+|++|+.||.|++||+.+++.+..+. |...|.+++|+|++++|++
T Consensus 228 -----------~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 228 -----------KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp -----------EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred -----------EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 2344454432 222334678899999999999999999999999998 9999999999999999998
Q ss_pred ccc
Q psy10867 338 YDF 340 (343)
Q Consensus 338 ~~~ 340 (343)
++.
T Consensus 297 ~~~ 299 (312)
T 4ery_A 297 AAL 299 (312)
T ss_dssp EEC
T ss_pred EEc
Confidence 864
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-47 Score=312.30 Aligned_cols=276 Identities=21% Similarity=0.287 Sum_probs=237.5
Q ss_pred eEEEecCCCCeEEEEecCC-----ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc
Q psy10867 6 EVAFSYDGSGAISVWEPKG-----GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR 80 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~ 80 (343)
.+++|++.|++|++|++.. +.++..+++|.. .|.+++|+|++.++++++.|++|++||+.+++....+.+|...
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH-IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeCCcc-cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence 3556666799999999864 456788999999 9999999999999999999999999999999988888899999
Q ss_pred eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecC------CCEEEEecCCCeEEEeecCccce
Q psy10867 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSAD------SNFIVTGGEDGTICVWQLSRLIC 153 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~ 153 (343)
|.+++|+|++.+|++ +.|+.|++||++ ++.+..+.+|...|.+++|.|. +..+++++.|+.|++||+++..
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~- 187 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ- 187 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-
Confidence 999999999999887 689999999986 5677888899999999999984 4489999999999999998753
Q ss_pred eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEE
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVA 233 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~ 233 (343)
....+.+|...|.+++|+|++ .+|++++.|+.|++||+++++.+..+.....+.+++
T Consensus 188 ---------------------~~~~~~~h~~~v~~~~~sp~g--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 244 (319)
T 3frx_A 188 ---------------------IEADFIGHNSNINTLTASPDG--TLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLA 244 (319)
T ss_dssp ---------------------EEEEECCCCSCEEEEEECTTS--SEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEE
T ss_pred ---------------------hheeecCCCCcEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEE
Confidence 445567899999999999999 899999999999999999999999998888999999
Q ss_pred EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc
Q psy10867 234 FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR 311 (343)
Q Consensus 234 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 311 (343)
|+|++.+|++++.+ .+++|++.......... .........|...+.+++|+|||++|++|+.||.|++||+.++
T Consensus 245 ~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 245 FSPNRYWLAAATAT-GIKVFSLDPQYLVDDLR---PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ECSSSSEEEEEETT-EEEEEEETTEEEEEEEC---CCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EcCCCCEEEEEcCC-CcEEEEeCcCeeeeccC---ccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 99999999988754 59999987644322211 0111123456778999999999999999999999999999764
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-47 Score=310.29 Aligned_cols=274 Identities=18% Similarity=0.208 Sum_probs=237.1
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
+|.++.|+|++ ||.|++||+.+++.+..+..|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 46666666665 89999999999999999999998 9999999999999999999999999999999988888
Q ss_pred ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcc
Q psy10867 75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
.+|.+.|.+++|+|++++|++ +.|++|++||++++ .....+.+|...|.+++|+| ++..|++|+.|+.|++||++..
T Consensus 94 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 899999999999999999987 68999999999987 45567889999999999999 6789999999999999999875
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEE
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLT 230 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~ 230 (343)
... ......|...+..+.++|..++.+|++++.|++|++||+++++++..+. |...|.
T Consensus 174 ~~~---------------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~ 232 (304)
T 2ynn_A 174 TPN---------------------FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVS 232 (304)
T ss_dssp SCS---------------------EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred Ccc---------------------ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEE
Confidence 432 2223456788999999885433799999999999999999999998887 788899
Q ss_pred EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC--EEEEEeCCCcEEEEec
Q psy10867 231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI--TLLSSSADETLKIWHT 308 (343)
Q Consensus 231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~i~iwd~ 308 (343)
+++|+|++++|++|+.||.|++||+.+... ...+..|...+.+++|+|++. ++++|+.| .+.+|++
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~ 300 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKV-----------EKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSL 300 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCCE-----------EEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCce-----------eeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEe
Confidence 999999999999999999999999887543 445677889999999999875 57777665 5778877
Q ss_pred cc
Q psy10867 309 IS 310 (343)
Q Consensus 309 ~~ 310 (343)
.+
T Consensus 301 ~~ 302 (304)
T 2ynn_A 301 GN 302 (304)
T ss_dssp C-
T ss_pred cc
Confidence 54
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-47 Score=313.48 Aligned_cols=297 Identities=15% Similarity=0.182 Sum_probs=241.6
Q ss_pred CceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc---eecccCCcceEEEEECCCCCEEEE-ecCC
Q psy10867 24 GGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA---QLRLICPGRISSMQASPDAAYIAV-SIET 99 (343)
Q Consensus 24 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~-~~d~ 99 (343)
..+++.++++|....|.+++|+|++.++++++.|+.|+|||+.++... ....+|...|.+++|+|++++|++ +.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 346788899997547999999999999999999999999999877543 223579999999999999999997 6899
Q ss_pred eEEEEEccCCc--eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867 100 KLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 100 ~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
.+++|++.++. .+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++...... .+.
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~-------------------~~~ 144 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE-------------------CVS 144 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE-------------------EEE
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE-------------------EEE
Confidence 99999998774 567889999999999999999999999999999999998753221 455
Q ss_pred eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--EEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Q psy10867 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFC 254 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 254 (343)
.+.+|...|.+++|+|++ .+|++++.|+.|++||.++++.. ..+. |...|.+++|+|++++|++++.|+.|++||
T Consensus 145 ~~~~h~~~v~~~~~~p~~--~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 145 VLNSHTQDVKHVVWHPSQ--ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp EECCCCSCEEEEEECSSS--SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EecCcCCCeEEEEECCCC--CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 677899999999999999 79999999999999999887543 4444 778899999999999999999999999999
Q ss_pred eecccccccccccC----CCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee---------eeecc-c
Q psy10867 255 LRQVPRTRDHHIQD----STSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC---------LRTIQ-H 319 (343)
Q Consensus 255 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~---------~~~~~-~ 319 (343)
.............. ..++..+.+ |...|++++|+|++..|++++.|+.|++|+...+.. ..... |
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 302 (345)
T 3fm0_A 223 QYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH 302 (345)
T ss_dssp EECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS
T ss_pred cccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc
Confidence 86543322111000 011122333 888999999999999999999999999999875421 12233 8
Q ss_pred CCceEEEEEccCCC-eeeecccC
Q psy10867 320 KGPVLGAFLGLLPP-AIHDYDFT 341 (343)
Q Consensus 320 ~~~v~~~~~sp~~~-~l~~~~~~ 341 (343)
...|++++|+|++. +|++++..
T Consensus 303 ~~~V~~v~~~p~~~~~laS~s~D 325 (345)
T 3fm0_A 303 SQDVNCVAWNPKEPGLLASCSDD 325 (345)
T ss_dssp SSCEEEEEECSSSTTEEEEEETT
T ss_pred cCcEeEeEEeCCCceEEEEcCCC
Confidence 89999999999985 88887653
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.8e-49 Score=327.77 Aligned_cols=303 Identities=15% Similarity=0.191 Sum_probs=255.0
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA 94 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 94 (343)
..+..|+.....+.+++++|.+ .|++++|+|++.++++++.|++|++||+.+++....+..|...|.+++|+|++++|+
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~-~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSG-KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSS-CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred ccccccccceeEEeeccccccc-EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 3456788888899999999999 999999999999999999999999999999998888889999999999999999999
Q ss_pred E-ecCCeEEEEEccCCc-------eEEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867 95 V-SIETKLHMWQISSGR-------LLATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 95 ~-~~d~~i~v~~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
+ +.|+.+++|++.+.. ....+.+|.+.|.++.|.|+ +..|++|+.|+.|++||++++.....+.
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~------- 197 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG------- 197 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC-------
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee-------
Confidence 8 689999999987532 34567899999999999996 4579999999999999999876554331
Q ss_pred CCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecC-CCceEEEee-cCCcEEEEEEcCCCCEEE
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLC-TGEDLLSLI-LDTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~-~~~~i~~~~~~~~~~~l~ 242 (343)
.....+|...|.++++++ ++ .++++|+.|+.|++||++ .++.+..+. |...|.+++|+|++++|+
T Consensus 198 ----------~~~~~~h~~~v~~~~~~~~~~--~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 265 (380)
T 3iz6_a 198 ----------SEFPSGHTADVLSLSINSLNA--NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG 265 (380)
T ss_dssp ----------CCSSSSCCSCEEEEEECSSSC--CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred ----------cccCCCCccCeEEEEeecCCC--CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence 111256899999999987 55 799999999999999998 446666665 788999999999999999
Q ss_pred EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec----c
Q psy10867 243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI----Q 318 (343)
Q Consensus 243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~ 318 (343)
+|+.|+.|++||+++......+... ......+...|++++|+|+|++|++|+.||.|++||+.+++.+..+ .
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~ 341 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNRE----PDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQN 341 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCC----CSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCS
T ss_pred EEcCCCeEEEEECCCCcEEEEeccc----ccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccC
Confidence 9999999999999876543322110 0111223446899999999999999999999999999998887766 3
Q ss_pred -cCCceEEEEEccCCCeeeecccC
Q psy10867 319 -HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 319 -~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|.+.|.+++|+|+|++|++++..
T Consensus 342 ~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 342 SHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp SCCCCCCEEEECSSSSEEEEECTT
T ss_pred CCCCceEEEEECCCCCEEEEeeCC
Confidence 88999999999999999999864
No 21
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.4e-47 Score=312.18 Aligned_cols=301 Identities=16% Similarity=0.177 Sum_probs=261.0
Q ss_pred ccceEEEecCCC--------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDGS--------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
+|..++|++++. +.+.+|+...........+|.. .|.+++|+|++.++++++ ||.|++|++.+++.....
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~ 88 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGE-VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV 88 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSS-CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCC-ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeee
Confidence 577888888873 3445555555444555557888 999999999999999998 699999999887644222
Q ss_pred ---c--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc--eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEe
Q psy10867 75 ---L--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVW 146 (343)
Q Consensus 75 ---~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 146 (343)
. .|...|.+++|+|++++|++ +.|+.|++||+.+++ ....+..|...|.+++|+|+++++++++.||.|++|
T Consensus 89 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~ 168 (337)
T 1gxr_A 89 SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168 (337)
T ss_dssp EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 2 68899999999999998887 678999999999887 566778899999999999999999999999999999
Q ss_pred ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC
Q psy10867 147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD 226 (343)
Q Consensus 147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 226 (343)
|+++++ ....+..|...|.+++|+|++ .++++++.|+.|++||+++++.+..+.+.
T Consensus 169 d~~~~~----------------------~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 224 (337)
T 1gxr_A 169 DLHNQT----------------------LVRQFQGHTDGASCIDISNDG--TKLWTGGLDNTVRSWDLREGRQLQQHDFT 224 (337)
T ss_dssp ETTTTE----------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred eCCCCc----------------------eeeeeecccCceEEEEECCCC--CEEEEEecCCcEEEEECCCCceEeeecCC
Confidence 998864 445566799999999999998 89999999999999999999999998899
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867 227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW 306 (343)
Q Consensus 227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 306 (343)
..+.+++|+|+++++++++.++.|++||++.... ..+..|...|.+++|+|++++|++++.||.|++|
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK------------YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe------------EEEcCCccceeEEEECCCCCEEEEecCCCcEEEE
Confidence 9999999999999999999999999999986432 2456789999999999999999999999999999
Q ss_pred ecccceeeeecccCCceEEEEEccCCCeeeecccC
Q psy10867 307 HTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 307 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|+.+++.+....+...+.+++|+|++++|++++..
T Consensus 293 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 293 RTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred ECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCC
Confidence 99999988777799999999999999999988754
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.1e-48 Score=320.68 Aligned_cols=274 Identities=13% Similarity=0.154 Sum_probs=223.8
Q ss_pred ccceEEEecCC--------------CCeEEEEecCCceEE----EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe
Q psy10867 3 LLNEVAFSYDG--------------SGAISVWEPKGGTLL----MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP 64 (343)
Q Consensus 3 ~v~~~~~s~~~--------------dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~ 64 (343)
.|+++.||||| |+.|++|+..++... ....+|.. .|.+++|+|++.+++++.+ |+|+|||
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~-~V~~~~~s~d~~~l~~s~d-g~v~lWd 121 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA-GVTDVAWVSEKGILVASDS-GAVELWE 121 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS-CEEEEEEETTTEEEEEETT-SCEEEC-
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC-CEEEEEEcCCCCEEEEECC-CEEEEee
Confidence 47788888887 578999998776543 34456777 8999999999998887765 9999999
Q ss_pred CCCcccce----ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEec
Q psy10867 65 VNSQEKAQ----LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGG 138 (343)
Q Consensus 65 ~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~ 138 (343)
+.+++... ...+|...|.+++|+|++++|++ +.|+.|++||+++++.+..+.+|...|.+++|+|++. ++++++
T Consensus 122 ~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred ccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence 98877542 23378999999999999999997 6899999999999999999999999999999999875 789999
Q ss_pred CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867 139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE 218 (343)
Q Consensus 139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 218 (343)
.||.|++||+++++.... .....+...+.+++|+|++. .+|++|+.|+.|++||+++++
T Consensus 202 ~dg~v~~wd~~~~~~~~~--------------------~~~~~~~~~v~~v~~sp~~~-~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATR--------------------IDFCASDTIPTSVTWHPEKD-DTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp TTSCEEECCTTSSSCBCB--------------------CCCTTCCSCEEEEEECTTST-TEEEEEESSSCEEEEESSCGG
T ss_pred cCCceEEEECCCCceeee--------------------eeeccccccccchhhhhccc-ceEEEeecccceeEEECCCCc
Confidence 999999999988654322 22345677899999999864 689999999999999999999
Q ss_pred eEEEee-cCCcEEEEEEcCCC-CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEE
Q psy10867 219 DLLSLI-LDTRLTCVAFDGTE-DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLL 295 (343)
Q Consensus 219 ~~~~~~-~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 295 (343)
.+..+. +...|.+++|+|++ ++|++|+.|+.|++||+++.+.. ...+|.+.|++++|+| ++++|+
T Consensus 261 ~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~------------~~~~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 261 SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF------------RDLSHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE------------EECCCSSCEEEEEECSSSTTEEE
T ss_pred EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe------------EECCCCCCEEEEEEeCCCCCEEE
Confidence 988887 67889999999987 57899999999999998765432 2347999999999998 789999
Q ss_pred EEeCCCcEEEEecccc
Q psy10867 296 SSSADETLKIWHTISR 311 (343)
Q Consensus 296 s~~~dg~i~iwd~~~~ 311 (343)
+++.||+|++|++.+.
T Consensus 329 s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEETTSCEEEEECC--
T ss_pred EEcCCCeEEEEECCCC
Confidence 9999999999999754
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.4e-47 Score=307.67 Aligned_cols=280 Identities=15% Similarity=0.156 Sum_probs=241.0
Q ss_pred ceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCc-----ccceecccCCcceEEEEECCCCCEEEE-ec
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQ-----EKAQLRLICPGRISSMQASPDAAYIAV-SI 97 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~ 97 (343)
..+..++++|.+ .|.+++|+|++ .++++++.|++|++|++... ..+..+.+|...|.+++|+|++++|++ +.
T Consensus 7 ~~l~~~l~gH~~-~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 7 LVLRGTLEGHNG-WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEECCCSS-CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEccccc-eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 355678999999 99999999965 88888888899999998653 234567799999999999999999987 68
Q ss_pred CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867 98 ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 98 d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
|++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++.. .+.
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-----------------------~~~ 142 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-----------------------CLA 142 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-----------------------EEE
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------------------eEE
Confidence 999999999999999999999999999999999999999999999999999753 556
Q ss_pred eecccccceEEEEeecCCC----ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867 178 VKSQHSLPVTHVTLSKLGA----KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i 252 (343)
.+.+|...|.++++.|... ...+++++.|+.|++||+++++....+. |...|.+++|+|++++|++++.||.|++
T Consensus 143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 6778999999999998641 1489999999999999999988877775 7889999999999999999999999999
Q ss_pred EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc---------cCCce
Q psy10867 253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ---------HKGPV 323 (343)
Q Consensus 253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~v 323 (343)
||+...... ..+. +...|.+++|+|++.+|++++.+ .+++|++..+..+..+. +...+
T Consensus 223 wd~~~~~~~-----------~~~~-~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 289 (319)
T 3frx_A 223 WNLAAKKAM-----------YTLS-AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHA 289 (319)
T ss_dssp EETTTTEEE-----------EEEE-CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCE
T ss_pred EECCCCcEE-----------EEec-CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcce
Confidence 999875442 2333 34679999999999999988765 59999998877666553 35678
Q ss_pred EEEEEccCCCeeeecccC
Q psy10867 324 LGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 324 ~~~~~sp~~~~l~~~~~~ 341 (343)
.+++|+|||++|++++..
T Consensus 290 ~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp EEEEECTTSSEEEEEETT
T ss_pred eEEEECCCCCEEEEeecC
Confidence 999999999999998754
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.2e-48 Score=323.01 Aligned_cols=279 Identities=20% Similarity=0.275 Sum_probs=237.7
Q ss_pred ccceEEEecC--------CCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-----
Q psy10867 3 LLNEVAFSYD--------GSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE----- 69 (343)
Q Consensus 3 ~v~~~~~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~----- 69 (343)
+|+++.|+|+ .||+|+|||+.+++.+..++.|.. .|.+++|+|++.++++++.|+.+++|++.+..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~-~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP-WVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT-TCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCS
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC-CEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCC
Confidence 4556655555 489999999999999999999999 99999999999999999999999999987532
Q ss_pred --cceecccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEe-----cccCCCeEEEEEec-CCCEEEEecC
Q psy10867 70 --KAQLRLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATA-----SSHYQPITIVKWSA-DSNFIVTGGE 139 (343)
Q Consensus 70 --~~~~~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~s~~~ 139 (343)
....+.+|.+.|.++.|+|++ ..|++ +.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++|+.
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 235567899999999999964 44554 78999999999999988777 67899999999987 8899999999
Q ss_pred CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED 219 (343)
Q Consensus 140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 219 (343)
|+.|++||++... +.+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++.
T Consensus 227 D~~v~~wd~~~~~---------------------~~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 227 DTTVRLWDLRITS---------------------RAVRTYHGHEGDINSVKFFPDG--QRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp TSCEEEEETTTTC---------------------CCCEEECCCSSCCCEEEECTTS--SEEEEECSSSCEEEEETTTTEE
T ss_pred CCeEEEEECCCCC---------------------cceEEECCcCCCeEEEEEecCC--CeEEEEcCCCeEEEEECCCCcE
Confidence 9999999997431 2556677899999999999999 8999999999999999999998
Q ss_pred EEEeecC--------CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC
Q psy10867 220 LLSLILD--------TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG 291 (343)
Q Consensus 220 ~~~~~~~--------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 291 (343)
+..+... ..+.+++|+|++++|++|+.||.|++||+...+..... .....+|.+.|++++|+|++
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~-------~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL-------GTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE-------CCSCSSCCCCCCEEEECSSS
T ss_pred EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE-------ecccCCCCCceEEEEECCCC
Confidence 8777531 23889999999999999999999999998765433221 11235799999999999999
Q ss_pred CEEEEEeCCCcEEEEecccce
Q psy10867 292 ITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 292 ~~l~s~~~dg~i~iwd~~~~~ 312 (343)
++|++|+.|+.|++|++...+
T Consensus 357 ~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 357 SALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SEEEEECTTSCEEEEECCSSS
T ss_pred CEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999997654
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9e-47 Score=310.81 Aligned_cols=280 Identities=17% Similarity=0.231 Sum_probs=231.8
Q ss_pred ceEEEecCCCCeEEEEecCC-------ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC
Q psy10867 5 NEVAFSYDGSGAISVWEPKG-------GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC 77 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~ 77 (343)
..++++++.|++|++||+.+ +.+...+.+|.. .|.+++|+|++.++++++.|++|++||+.+++.+..+.+|
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH-FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS-CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 34677788899999999874 456778999999 9999999999999999999999999999999988888899
Q ss_pred CcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec---ccCCCeEEEEEecCC----------CEEEEecCCCeE
Q psy10867 78 PGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS---SHYQPITIVKWSADS----------NFIVTGGEDGTI 143 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~s~~~dg~i 143 (343)
...|.+++|+|++++|++ +.|+.|++||+... ...... +|...|.+++|+|++ .+|++++.||.|
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 196 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL 196 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence 999999999999998887 68999999999743 333333 788999999999986 789999999999
Q ss_pred EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCceEEE
Q psy10867 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGEDLLS 222 (343)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~ 222 (343)
++||.... ....+.+|...|.+++|+|++ ++|++++.|+.|++||+. .......
T Consensus 197 ~iwd~~~~-----------------------~~~~~~~h~~~v~~~~~s~~g--~~l~sgs~dg~v~iwd~~~~~~~~~~ 251 (343)
T 2xzm_R 197 KVWNTNFQ-----------------------IRYTFKAHESNVNHLSISPNG--KYIATGGKDKKLLIWDILNLTYPQRE 251 (343)
T ss_dssp EEEETTTE-----------------------EEEEEECCSSCEEEEEECTTS--SEEEEEETTCEEEEEESSCCSSCSEE
T ss_pred EEEcCCCc-----------------------eeEEEcCccccceEEEECCCC--CEEEEEcCCCeEEEEECCCCccccee
Confidence 99995432 455667899999999999999 899999999999999994 4455566
Q ss_pred eecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc--CCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867 223 LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ--DSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD 300 (343)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 300 (343)
+.+...+.+++|+|++.+++++ .|+.|++||+.+........+. .........+|...|++++|+|++++|++|+.|
T Consensus 252 ~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 252 FDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp EECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred ecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 6677789999999999888755 5788999999875443211110 000112234788899999999999999999999
Q ss_pred CcEEEEecccce
Q psy10867 301 ETLKIWHTISRQ 312 (343)
Q Consensus 301 g~i~iwd~~~~~ 312 (343)
|.|++|++++++
T Consensus 331 g~v~~w~~~~g~ 342 (343)
T 2xzm_R 331 GVIRTFSFETSA 342 (343)
T ss_dssp SEEEEEEEEEEE
T ss_pred ceEEEEEEEccC
Confidence 999999998764
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9e-47 Score=310.87 Aligned_cols=290 Identities=16% Similarity=0.205 Sum_probs=230.6
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEE---EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLM---SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-- 69 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-- 69 (343)
+|..+.|+|++ |+.|+|||+.+++... ...+|.. .|.+++|+|++.++++++.|+.+++|+...+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~-~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR-TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSS-CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCC-cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE
Confidence 45555555554 8999999998876432 2367888 99999999999999999999999999987764
Q ss_pred cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc---eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867 70 KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR---LLATASSHYQPITIVKWSADSNFIVTGGEDGTICV 145 (343)
Q Consensus 70 ~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 145 (343)
.+..+.+|...|.+++|+|++++|++ +.|+.|++||+.++. .+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~ 176 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence 45667799999999999999999997 689999999998763 45677899999999999999999999999999999
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--------
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------- 217 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------- 217 (343)
||.+..... ....+.+|...|.+++|+|++ ++|++++.|++|++||....
T Consensus 177 w~~~~~~~~--------------------~~~~~~~h~~~v~~l~~sp~g--~~l~s~s~D~~v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 177 YREEEDDWV--------------------CCATLEGHESTVWSLAFDPSG--QRLASCSDDRTVRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp EEEETTEEE--------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred EEecCCCEE--------------------EEEEecCCCCceEEEEECCCC--CEEEEEeCCCeEEEeccccCCCCcccee
Confidence 998765321 345677899999999999999 89999999999999996432
Q ss_pred -------ceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867 218 -------EDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS 288 (343)
Q Consensus 218 -------~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 288 (343)
+++..+. |...|.+++|+|++..|++++.|+.|++|+............ ........+|...|++++|+
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~--~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF--SLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE--EEEEEETTSSSSCEEEEEEC
T ss_pred eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE--EEEeeecccccCcEeEeEEe
Confidence 1222332 567899999999999999999999999999876432211000 00011235799999999999
Q ss_pred cCC-CEEEEEeCCCcEEEEecccceeeeec
Q psy10867 289 ITG-ITLLSSSADETLKIWHTISRQCLRTI 317 (343)
Q Consensus 289 ~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 317 (343)
|++ .+||+|+.||.|++|++.+++.+..+
T Consensus 313 p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 313 PKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp SSSTTEEEEEETTSCEEEEEECC-------
T ss_pred CCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 987 49999999999999999888765543
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-46 Score=314.61 Aligned_cols=299 Identities=20% Similarity=0.244 Sum_probs=244.0
Q ss_pred eEEEEecCCceE----EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC-------------
Q psy10867 16 AISVWEPKGGTL----LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP------------- 78 (343)
Q Consensus 16 ~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~------------- 78 (343)
...+|+....+. +.....|.. .|.+++|+|+|.+++++.+ +.+++|++.+++.+..+..+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~fspdg~~la~g~~-~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 118 (393)
T 1erj_A 41 YYILYNPALPREIDVELHKSLDHTS-VVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSS 118 (393)
T ss_dssp CEEEECTTSCCCEEEEEEEEEECSS-CCCEEEECTTSSEEEEECB-SCEEEEETTTCCEEEEECC---------------
T ss_pred eEEEECCCCCcccCceeEEecCCCC-EEEEEEECCCCCEEEEEcC-CcEEEEEecCCCEEEEecCccccccccccccccc
Confidence 345777654322 122335888 9999999999999999886 899999999888765554332
Q ss_pred -----cceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccc
Q psy10867 79 -----GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLI 152 (343)
Q Consensus 79 -----~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 152 (343)
..|.+++|+|++++|++ +.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++.
T Consensus 119 ~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 119 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 24899999999999997 689999999999999999999999999999999999999999999999999999875
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEe--------
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSL-------- 223 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-------- 223 (343)
....+ .+...+.+++++| ++ .++++++.|+.|++||+++++.+..+
T Consensus 199 ~~~~~-----------------------~~~~~v~~~~~~~~~~--~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~ 253 (393)
T 1erj_A 199 CSLTL-----------------------SIEDGVTTVAVSPGDG--KYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 253 (393)
T ss_dssp EEEEE-----------------------ECSSCEEEEEECSTTC--CEEEEEETTSCEEEEETTTCCEEEEEC------C
T ss_pred eEEEE-----------------------EcCCCcEEEEEECCCC--CEEEEEcCCCcEEEEECCCCcEEEeecccccCCC
Confidence 43322 2567799999999 66 89999999999999999999887765
Q ss_pred ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc-cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867 224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET 302 (343)
Q Consensus 224 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 302 (343)
.|...|.+++|+|++++|++|+.|+.|++||++.......... ....+...+.+|...|.+++|+|++++|++|+.|+.
T Consensus 254 ~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 254 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 2567899999999999999999999999999986543221110 112234467789999999999999999999999999
Q ss_pred EEEEecccceeeeecc-cCCceEEEEEcc------CCCeeeecccC
Q psy10867 303 LKIWHTISRQCLRTIQ-HKGPVLGAFLGL------LPPAIHDYDFT 341 (343)
Q Consensus 303 i~iwd~~~~~~~~~~~-~~~~v~~~~~sp------~~~~l~~~~~~ 341 (343)
|++||+.+++++..+. |.+.|.+++|+| ++++|++++..
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~D 379 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD 379 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCC
Confidence 9999999999999998 999999999886 68899998753
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-46 Score=305.12 Aligned_cols=292 Identities=18% Similarity=0.193 Sum_probs=228.6
Q ss_pred CCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceec-cc-CCcceEEEEECCCCCEEEE-ec
Q psy10867 23 KGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLR-LI-CPGRISSMQASPDAAYIAV-SI 97 (343)
Q Consensus 23 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~-~~-~~~~v~~~~~s~~~~~l~~-~~ 97 (343)
.+.+++.++++|.. .|.+++|+|+ ++++++.|+.|++|++..+. ....+ .. |...|.+++|+|++++|++ +.
T Consensus 2 ~~~~~~~~~~~h~~-~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 2 ASINLIKSLKLYKE-KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp -CCEEEEEEECCSS-CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred cccccceeeccCCC-ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 35677889999999 9999999998 78888888999999998753 33333 34 9999999999999999997 68
Q ss_pred CCeEEEEEccC-------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867 98 ETKLHMWQISS-------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170 (343)
Q Consensus 98 d~~i~v~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
|+.|++|++.. .+.+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++.....
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~---------------- 142 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE---------------- 142 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC----------------
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC----------------
Confidence 99999999853 3466788899999999999999999999999999999999542110
Q ss_pred cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--ceEEEee-cCCcEEEEEEcCC--CCEEEEEc
Q psy10867 171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--EDLLSLI-LDTRLTCVAFDGT--EDNIYMGT 245 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~-~~~~i~~~~~~~~--~~~l~~~~ 245 (343)
.+.+..+.+|...|.+++|+|++ .+|++++.|++|++||..++ +++..+. |...|.+++|+|+ +.+|++++
T Consensus 143 --~~~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 143 --YECISVLQEHSQDVKHVIWHPSE--ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp --CEEEEEECCCSSCEEEEEECSSS--SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred --eEEEEEeccCCCceEEEEECCCC--CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe
Confidence 12456678899999999999998 89999999999999998776 4566665 7889999999998 67999999
Q ss_pred CCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce--eeeec-c-cC
Q psy10867 246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ--CLRTI-Q-HK 320 (343)
Q Consensus 246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~-~-~~ 320 (343)
.|+.|++||+.......... ......+.+ |...|++++|++++ +|++++.||.|++||..+++ .+... . |.
T Consensus 219 ~D~~v~iw~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~ 294 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQE---WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHG 294 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEE---EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTT
T ss_pred CCCeEEEEEecCCCccccce---eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccc
Confidence 99999999998643211000 001222333 88999999999765 89999999999999998774 33332 3 66
Q ss_pred C-ceEEEEEcc--CCCeeeecccC
Q psy10867 321 G-PVLGAFLGL--LPPAIHDYDFT 341 (343)
Q Consensus 321 ~-~v~~~~~sp--~~~~l~~~~~~ 341 (343)
. .|.+++|+| ++++|++++..
T Consensus 295 ~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 295 VYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp TSCEEEEEEC-----CCEEEEETT
T ss_pred cceEEEEEEecCCCceEEEEecCC
Confidence 6 899999999 78999988753
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.8e-46 Score=326.38 Aligned_cols=296 Identities=25% Similarity=0.370 Sum_probs=259.3
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
+|.++.|++++ |+.|++||. +++.+..+.+|.. .|.+++|+|++..+++++.|+.|++|+.. ++....+
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~-~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~ 299 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTL 299 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCC-CEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEE
Confidence 45566666554 899999996 6788899999999 99999999999999999988999999975 4556667
Q ss_pred ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867 75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC 153 (343)
Q Consensus 75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 153 (343)
.+|...|.+++|+|++++|++ +.|+.|++||+. +..+..+.+|...+.+++|+|++++|++++.||.|++||....
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~-- 376 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-- 376 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC--
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC--
Confidence 789999999999999999987 688999999975 4556778899999999999999999999999999999996542
Q ss_pred eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEE
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCV 232 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~ 232 (343)
.+..+.+|...|.+++|+|++ ++|++++.|+.|++||. +++.+..+. |...|.++
T Consensus 377 ---------------------~~~~~~~~~~~v~~~~~s~dg--~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~ 432 (577)
T 2ymu_A 377 ---------------------LLQTLTGHSSSVRGVAFSPDG--QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV 432 (577)
T ss_dssp ---------------------EEEEEECCSSCEEEEEECTTS--SCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEE
T ss_pred ---------------------EEEEecCCCCCeEEEEECCCC--CEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEE
Confidence 556667899999999999999 89999999999999995 566666665 78889999
Q ss_pred EEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867 233 AFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 233 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 312 (343)
+|+|++++|++++.|+.|++||... ..+..+.+|...|++++|+|++++|++++.|+.|++||. +++
T Consensus 433 ~~s~d~~~l~~~~~d~~v~~w~~~~------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~ 499 (577)
T 2ymu_A 433 AFSPDDQTIASASDDKTVKLWNRNG------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ 499 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTS------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSC
T ss_pred EECCCCCEEEEEcCCCEEEEEECCC------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCC
Confidence 9999999999999999999999643 114567789999999999999999999999999999995 688
Q ss_pred eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 313 CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 313 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
++..+. |...|++++|+|++++|++++..
T Consensus 500 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 500 LLQTLTGHSSSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEECc
Confidence 888888 99999999999999999998753
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-45 Score=303.29 Aligned_cols=283 Identities=14% Similarity=0.126 Sum_probs=232.2
Q ss_pred ceEEEEEecCCCCcceEEEE-----eC-CceEEEEEcCCCeEEEEeCCCc-------ccceecccCCcceEEEEECCCCC
Q psy10867 25 GTLLMSYKGASVLSPHSMCL-----LG-NDYVLGVEKGKPMIQAWPVNSQ-------EKAQLRLICPGRISSMQASPDAA 91 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~-----~~-~~~~~~~~~~~~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~ 91 (343)
.++...+++|.. .|++++| ++ ++.++++++.|++|++||+... .....+.+|...|.+++|+|++.
T Consensus 11 ~~~~~~l~gH~~-~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 11 VVKRGILEGHSD-WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEECCSS-CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred eeeeeeeccchh-hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 345678999999 9999999 66 8999999999999999998754 23455678999999999999999
Q ss_pred EEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867 92 YIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170 (343)
Q Consensus 92 ~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
++++ +.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+......
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~---------------- 153 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF---------------- 153 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE----------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee----------------
Confidence 9987 68999999999999999999999999999999999999999999999999999743111
Q ss_pred cccceeeeecccccceEEEEeecCCC--------ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEE
Q psy10867 171 GLTEPLHVKSQHSLPVTHVTLSKLGA--------KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNI 241 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l 241 (343)
.......|...|.+++|+|++. ..++++++.|+.|++||. ..+....+. |...|.+++|+|++++|
T Consensus 154 ----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l 228 (343)
T 2xzm_R 154 ----SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYI 228 (343)
T ss_dssp ----ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ----eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEE
Confidence 1112236888999999999862 148999999999999994 455555554 78899999999999999
Q ss_pred EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee--ec--
Q psy10867 242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR--TI-- 317 (343)
Q Consensus 242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~-- 317 (343)
++|+.|+.|++||+...... .. ...+...|.+++|+|++++++++ .|+.|++||+.+++... .+
T Consensus 229 ~sgs~dg~v~iwd~~~~~~~----------~~-~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 229 ATGGKDKKLLIWDILNLTYP----------QR-EFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp EEEETTCEEEEEESSCCSSC----------SE-EEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCC
T ss_pred EEEcCCCeEEEEECCCCccc----------ce-eecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeec
Confidence 99999999999998543221 11 12345679999999999877655 57889999998776543 22
Q ss_pred ----------ccCCceEEEEEccCCCeeeecccC
Q psy10867 318 ----------QHKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 318 ----------~~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
.|...|.+++|+|+|++|++++..
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred CcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 256779999999999999998753
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-46 Score=311.13 Aligned_cols=281 Identities=20% Similarity=0.280 Sum_probs=234.8
Q ss_pred cccceEEEecCC-------CCeEEEEecCCceEEEEEecCCC-----------------CcceEEEEeCCceEEEEEcCC
Q psy10867 2 SLLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASV-----------------LSPHSMCLLGNDYVLGVEKGK 57 (343)
Q Consensus 2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~~~ 57 (343)
..|.++.|++++ ++.+++|++.+++.+..+..+.. ..|.+++|+|++.++++++.|
T Consensus 65 ~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d 144 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAED 144 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCC
Confidence 357788888887 57899999999999888876542 138999999999999999999
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEE
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIV 135 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 135 (343)
+.|++||+.+++.+..+.+|...|.+++|+|++++|++ +.|+.|++||+++++....+. +...+.+++|+| ++++|+
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIA 223 (393)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEE
Confidence 99999999999988888899999999999999999887 689999999999998877775 556799999999 899999
Q ss_pred EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867 136 TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC 215 (343)
Q Consensus 136 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 215 (343)
+|+.||.|++||++++.....+. .......+|...|.+++|+|++ .+|++++.|+.|++||++
T Consensus 224 ~~s~d~~v~iwd~~~~~~~~~~~---------------~~~~~~~~h~~~v~~v~~~~~g--~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 224 AGSLDRAVRVWDSETGFLVERLD---------------SENESGTGHKDSVYSVVFTRDG--QSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC---------------------CCCSSCEEEEEECTTS--SEEEEEETTSEEEEEEC-
T ss_pred EEcCCCcEEEEECCCCcEEEeec---------------ccccCCCCCCCCEEEEEECCCC--CEEEEEeCCCEEEEEECC
Confidence 99999999999999876544332 0112235799999999999999 899999999999999997
Q ss_pred CCc------------eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcE
Q psy10867 216 TGE------------DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV 282 (343)
Q Consensus 216 ~~~------------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 282 (343)
+.. +...+. |...|.+++|+|++.+|++|+.|+.|++||+.+... +..+.+|...|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~-----------~~~l~~h~~~v 355 (393)
T 1erj_A 287 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP-----------LLMLQGHRNSV 355 (393)
T ss_dssp --------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-----------EEEEECCSSCE
T ss_pred CCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-----------EEEECCCCCCE
Confidence 643 233333 677899999999999999999999999999876543 45678999999
Q ss_pred EEEEEcc------CCCEEEEEeCCCcEEEEecccc
Q psy10867 283 TSLSCSI------TGITLLSSSADETLKIWHTISR 311 (343)
Q Consensus 283 ~~~~~s~------~~~~l~s~~~dg~i~iwd~~~~ 311 (343)
.+++|++ ++++|++|+.||.|++|++...
T Consensus 356 ~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9999986 6889999999999999998653
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.5e-45 Score=297.71 Aligned_cols=272 Identities=20% Similarity=0.363 Sum_probs=236.8
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
+|.++.|++++ ||.|++|+..+++....+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCC-ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 45555555554 89999999999999999999999 9999999999999999999999999999999988888
Q ss_pred ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccce
Q psy10867 75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLIC 153 (343)
Q Consensus 75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 153 (343)
..|...|.+++|+|++++|++ +.|+.|++||+++++.+..+..|..+|.+++|+|++++|++++.||.|++||+++++.
T Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 104 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 899999999999999999997 6899999999999999999999999999999999999999999999999999988654
Q ss_pred eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCc---E
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTR---L 229 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~---i 229 (343)
... ....+...+..++|+|++ .++++++.|+.|++||+++++.+..+. +... +
T Consensus 184 ~~~---------------------~~~~~~~~~~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 184 LKT---------------------LIDDDNPPVSFVKFSPNG--KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 240 (312)
T ss_dssp EEE---------------------ECCSSCCCEEEEEECTTS--SEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCC
T ss_pred eeE---------------------EeccCCCceEEEEECCCC--CEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEE
Confidence 332 223466789999999999 899999999999999999999888776 3322 2
Q ss_pred EEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEEe
Q psy10867 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIWH 307 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd 307 (343)
......+++.+|++|+.||.|++||+.+... +..+.+|...|.+++|+|++++|++++ .|+.|++|+
T Consensus 241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEI-----------VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp CEEEECSSSCEEEECCTTSCEEEEETTTCCE-----------EEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEECCCchh-----------hhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 3333446788999999999999999987543 456788999999999999999999987 699999998
Q ss_pred cc
Q psy10867 308 TI 309 (343)
Q Consensus 308 ~~ 309 (343)
.+
T Consensus 310 ~d 311 (312)
T 4ery_A 310 SD 311 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-45 Score=302.67 Aligned_cols=274 Identities=15% Similarity=0.150 Sum_probs=216.6
Q ss_pred EEEecCCCCeEEEEecCCc--eEEEEE-ec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-------cccceecc
Q psy10867 7 VAFSYDGSGAISVWEPKGG--TLLMSY-KG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-------QEKAQLRL 75 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~--~~~~~~-~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-------~~~~~~~~ 75 (343)
++++++.|+.|++||+.++ +.+..+ .+ |.. .|.+++|+|++.++++++.|++|++|++.. .+....+.
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~-~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 104 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKK-AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE 104 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCS-CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccC-CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc
Confidence 5667778999999999875 456666 44 888 999999999999999999999999999853 23445667
Q ss_pred cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867 76 ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR 150 (343)
Q Consensus 76 ~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 150 (343)
+|...|.+++|+|++++|++ +.|+.|++||+... +++..+.+|...|.+++|+|++++|++++.|+.|++||..+
T Consensus 105 ~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 89999999999999999997 68999999999432 46678889999999999999999999999999999999875
Q ss_pred cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--------ceEEE
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--------EDLLS 222 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--------~~~~~ 222 (343)
... +.+..+.+|...|.+++|+|++...+|++++.|++|++||++.+ .....
T Consensus 185 ~~~--------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 185 DDW--------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp TEE--------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCe--------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee
Confidence 421 25667789999999999999843278999999999999998765 23333
Q ss_pred ee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC-cEEEEEEcc--CCCEEEEE
Q psy10867 223 LI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK-QVTSLSCSI--TGITLLSS 297 (343)
Q Consensus 223 ~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~~~~l~s~ 297 (343)
+. |...|.+++|++++ +|++++.||.|++||......... .....+|.. .|.+++|+| ++++|++|
T Consensus 245 ~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~--------~~~~~~h~~~~v~~v~~~~~~~~~~las~ 315 (330)
T 2hes_X 245 LPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVF--------AKRALCHGVYEINVVKWLELNGKTILATG 315 (330)
T ss_dssp CCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEE--------EEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred cccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEE--------eccccccccceEEEEEEecCCCceEEEEe
Confidence 33 67789999999765 899999999999999875421000 112346776 899999999 78999999
Q ss_pred eCCCcEEEEeccc
Q psy10867 298 SADETLKIWHTIS 310 (343)
Q Consensus 298 ~~dg~i~iwd~~~ 310 (343)
+.||.|++||+++
T Consensus 316 s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 316 GDDGIVNFWSLEK 328 (330)
T ss_dssp ETTSEEEEEEC--
T ss_pred cCCCcEEEEEecc
Confidence 9999999999864
No 34
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-45 Score=312.42 Aligned_cols=296 Identities=13% Similarity=0.151 Sum_probs=252.4
Q ss_pred EEEecCCCCeEEEEec----CCce------EEEEEec----------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC
Q psy10867 7 VAFSYDGSGAISVWEP----KGGT------LLMSYKG----------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN 66 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~----~~~~------~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~ 66 (343)
++++++.||.|++||+ .+++ ....+.. |.. .|.+++|+|++.++++++.||.|++|+ .
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~i~~-~ 137 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTN-QVTCLAWSHDGNSIVTGVENGELRLWN-K 137 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CB-CEEEEEECTTSSEEEEEETTSCEEEEE-T
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCC-ceEEEEEcCCCCEEEEEeCCCeEEEEe-C
Confidence 3444444699999999 8888 5555555 677 999999999999999999889999999 5
Q ss_pred CcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCC---------------eEEEEEecC
Q psy10867 67 SQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQP---------------ITIVKWSAD 130 (343)
Q Consensus 67 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~ 130 (343)
+++....+..|...|.+++|+|++++|++ +.|+.|++||+.+++.+..+..+... +.+++|+|+
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (425)
T 1r5m_A 138 TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD 217 (425)
T ss_dssp TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence 56667777789999999999999998887 68999999999999999988887776 999999987
Q ss_pred CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEE
Q psy10867 131 SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCK 210 (343)
Q Consensus 131 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~ 210 (343)
+ .+++++.+|.|++||+++.. ....+..|...|.+++|+|++ .+|++++.|+.|+
T Consensus 218 ~-~~~~~~~~g~i~~~d~~~~~----------------------~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 218 D-KFVIPGPKGAIFVYQITEKT----------------------PTGKLIGHHGPISVLEFNDTN--KLLLSASDDGTLR 272 (425)
T ss_dssp T-EEEEECGGGCEEEEETTCSS----------------------CSEEECCCSSCEEEEEEETTT--TEEEEEETTSCEE
T ss_pred C-EEEEEcCCCeEEEEEcCCCc----------------------eeeeeccCCCceEEEEECCCC--CEEEEEcCCCEEE
Confidence 5 58889999999999998863 445556799999999999998 7999999999999
Q ss_pred EEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867 211 IFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289 (343)
Q Consensus 211 ~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 289 (343)
+||+++++.+..+. +...+.+++|+|++ ++++++.|+.|++||++.... +..+..|...|.+++|+|
T Consensus 273 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL-----------LALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE-----------EEEEECTTCCEEEEEECT
T ss_pred EEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE-----------eEecccCCccEEEEEEcC
Confidence 99999999888886 78899999999999 999999999999999976543 445667889999999999
Q ss_pred CCCEEEEEeCCCcEEEEecccce--------------------eeeecc-cCC--ceEEEEEccCCCeeeecccC
Q psy10867 290 TGITLLSSSADETLKIWHTISRQ--------------------CLRTIQ-HKG--PVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 290 ~~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~-~~~--~v~~~~~sp~~~~l~~~~~~ 341 (343)
++++|++++.||.|++||+.+++ .+..+. |.. .|++++|+|++++|++++..
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 99999999999999999999988 888888 655 99999999999999988754
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.5e-45 Score=310.91 Aligned_cols=315 Identities=13% Similarity=0.116 Sum_probs=249.0
Q ss_pred EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867 9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASP 88 (343)
Q Consensus 9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~ 88 (343)
++++.||.|++||+.+++....+..+. .+....++|++.++++++.||.|++||+.+++....+..|...|.+++|+|
T Consensus 72 ~~~~~d~~v~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 149 (420)
T 3vl1_A 72 YKARLDGHDFLFNTIIRDGSKMLKRAD--YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP 149 (420)
T ss_dssp EEEEETTEEEEEECCSEETTTTSCSCC--EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT
T ss_pred EEEEcCCcEEEEEecccceeeEEecCC--ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC
Confidence 334448999999999888777777663 566667899999999999999999999999988888789999999999999
Q ss_pred CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867 89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK 167 (343)
Q Consensus 89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 167 (343)
++++|++ +.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++....+..........
T Consensus 150 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 150 SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence 9998887 689999999999999999999999999999999999999999999999999999887666553211000000
Q ss_pred cc--ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCC-EEE
Q psy10867 168 GV--TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTED-NIY 242 (343)
Q Consensus 168 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~-~l~ 242 (343)
.. ............+...+.+++|+|++ .++++++.||.|++||+++++....+. +...+.+++|+|+++ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYG--KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIY 307 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTT--EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCC--CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEE
Confidence 00 00000000112244667777788888 899999999999999999998887775 567899999999999 999
Q ss_pred EEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce---------
Q psy10867 243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ--------- 312 (343)
Q Consensus 243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--------- 312 (343)
+|+.||.|++||+++.... +..+.. |...+.++.+ +++++|++++.|+.|++|++...+
T Consensus 308 ~g~~dg~i~vwd~~~~~~~----------~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 376 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECP----------VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFE 376 (420)
T ss_dssp EEETTSEEEEEETTCTTSC----------SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTT
T ss_pred EEeCCCeEEEEEcCCCcCc----------hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceecc
Confidence 9999999999999875432 334555 6677888855 578899999999999999987632
Q ss_pred -eeeecccCCceEEEEEccCCC---eeeec
Q psy10867 313 -CLRTIQHKGPVLGAFLGLLPP---AIHDY 338 (343)
Q Consensus 313 -~~~~~~~~~~v~~~~~sp~~~---~l~~~ 338 (343)
......+.+.|.+++|+|+++ .|+++
T Consensus 377 ~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~ 406 (420)
T 3vl1_A 377 TPTFLVSNDDAVSQFCYVSDDESNGEVLEV 406 (420)
T ss_dssp SCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred CccEEccCCcceEEEEEccCCCCcceEEEE
Confidence 112223778999999999999 44444
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.5e-45 Score=305.47 Aligned_cols=276 Identities=17% Similarity=0.288 Sum_probs=236.9
Q ss_pred EEecCCCCeEEEEecCCceEEEEEec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867 8 AFSYDGSGAISVWEPKGGTLLMSYKG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA 86 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 86 (343)
+++++.||.|++||+.+++....+.. |.. .|.+++|+|++.++++++.||.|++||+.+++.+..+..|...|.+++|
T Consensus 106 l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~-~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 184 (401)
T 4aez_A 106 VVAVALERNVYVWNADSGSVSALAETDEST-YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW 184 (401)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCTTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEEECCCeEEEeeCCCCcEeEeeecCCCC-CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE
Confidence 34555689999999999999888877 566 9999999999999999998899999999999988888899999999999
Q ss_pred CCCCCEEEE-ecCCeEEEEEcc-CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867 87 SPDAAYIAV-SIETKLHMWQIS-SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 87 s~~~~~l~~-~~d~~i~v~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
+ +++|++ +.|+.|++||++ .+..+..+.+|.+.|.+++|+|++++|++++.||.|++||+++..
T Consensus 185 ~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~------------ 250 (401)
T 4aez_A 185 N--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI------------ 250 (401)
T ss_dssp E--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS------------
T ss_pred C--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC------------
Confidence 4 567776 789999999998 567788889999999999999999999999999999999998853
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCceEEEEee--CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEE
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (343)
+...+..|...|.+++|+|++. .++++++ .|+.|++||+++++.+..+.+...+.+++|+|++++++
T Consensus 251 ----------~~~~~~~~~~~v~~~~~~p~~~-~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 319 (401)
T 4aez_A 251 ----------PKFTKTNHNAAVKAVAWCPWQS-NLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIM 319 (401)
T ss_dssp ----------EEEEECCCSSCCCEEEECTTST-TEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEE
T ss_pred ----------ccEEecCCcceEEEEEECCCCC-CEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEE
Confidence 4555667999999999999875 5777765 79999999999999999999999999999999999999
Q ss_pred E--EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 243 M--GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 243 ~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
+ |+.||.|++||+....... ...+.+|...|.+++|+|++++|++++.||.|++||+.+++.+....
T Consensus 320 ~~~g~~dg~i~v~~~~~~~~~~---------~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 320 STHGFPDNNLSIWSYSSSGLTK---------QVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEECTTTCEEEEEEEETTEEEE---------EEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEeecCCCcEEEEecCCcccee---------EEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9 5589999999998743322 33467899999999999999999999999999999999998776654
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-46 Score=315.18 Aligned_cols=305 Identities=9% Similarity=0.100 Sum_probs=251.2
Q ss_pred EEEec----------CCCCeEEEEecCCce---EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC----cc
Q psy10867 7 VAFSY----------DGSGAISVWEPKGGT---LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS----QE 69 (343)
Q Consensus 7 ~~~s~----------~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~----~~ 69 (343)
+++++ +.|+.|++||+.+++ .+..+ .|.. .|.+++|+|++.++++++.||.|++|++.+ .+
T Consensus 27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~-~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~ 104 (416)
T 2pm9_A 27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDS-KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN 104 (416)
T ss_dssp EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSS-CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC
T ss_pred EEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCC-ceEEEEECCCCCeEEEEccCCeEEEeeccccccccc
Confidence 67777 778899999998875 33334 4666 999999999999999998889999999987 34
Q ss_pred cceecccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEccCCc------eEE---EecccCCCeEEEEEecC-CCEEEEe
Q psy10867 70 KAQLRLICPGRISSMQASPD-AAYIAV-SIETKLHMWQISSGR------LLA---TASSHYQPITIVKWSAD-SNFIVTG 137 (343)
Q Consensus 70 ~~~~~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~~~------~~~---~~~~~~~~v~~~~~~~~-~~~l~s~ 137 (343)
....+..|...|.+++|+|+ +++|++ +.|+.|++||+.+++ ... .+..|...|.+++|+|+ +.+|+++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 56677789999999999998 788887 679999999999876 332 34678999999999998 7899999
Q ss_pred cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC---eEEEEec
Q psy10867 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR---TCKIFDL 214 (343)
Q Consensus 138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~---~i~~wd~ 214 (343)
+.||.|++||+++.+....+. ......+|...|.+++|+|++. .++++++.|+ .|++||+
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLS----------------YTSPNSGIKQQLSVVEWHPKNS-TRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEEC----------------CCCCSSCCCCCEEEEEECSSCT-TEEEEEECCSSSCCCCEEET
T ss_pred cCCCCEEEEECCCCCcceEEe----------------ccccccccCCceEEEEECCCCC-CEEEEEECCCCCceEEEEeC
Confidence 999999999999876544332 1011123378999999999974 6899999998 9999999
Q ss_pred CCC-ceEEEee--cCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867 215 CTG-EDLLSLI--LDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 215 ~~~-~~~~~~~--~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
+++ +....+. |...+.+++|+| ++++|++++.|+.|++||+++... +..+.+|...|++++|+|+
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~-----------~~~~~~~~~~v~~~~~s~~ 316 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ-----------LSQFPARGNWCFKTKFAPE 316 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE-----------EEEEECSSSCCCCEEECTT
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc-----------ceeecCCCCceEEEEECCC
Confidence 986 5555565 778899999999 999999999999999999987543 4567789999999999999
Q ss_pred C-CEEEEEeCCCcEEEEecccceeeeec-----------------------------------c-cCCceEEEEEccCCC
Q psy10867 291 G-ITLLSSSADETLKIWHTISRQCLRTI-----------------------------------Q-HKGPVLGAFLGLLPP 333 (343)
Q Consensus 291 ~-~~l~s~~~dg~i~iwd~~~~~~~~~~-----------------------------------~-~~~~v~~~~~sp~~~ 333 (343)
+ ++|++++.|+.|++||+.+++..... . +..++.+++|+|+|+
T Consensus 317 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 396 (416)
T 2pm9_A 317 APDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK 396 (416)
T ss_dssp CTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE
T ss_pred CCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe
Confidence 9 89999999999999999876543221 1 456778999999999
Q ss_pred eeeecccC
Q psy10867 334 AIHDYDFT 341 (343)
Q Consensus 334 ~l~~~~~~ 341 (343)
+|++++..
T Consensus 397 ~la~~~~d 404 (416)
T 2pm9_A 397 LVQITPDG 404 (416)
T ss_dssp EECBCTTS
T ss_pred EEEEeCCC
Confidence 99998743
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.7e-44 Score=301.03 Aligned_cols=282 Identities=21% Similarity=0.353 Sum_probs=235.2
Q ss_pred CCeEEEEecCCceEEEEEe--cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867 14 SGAISVWEPKGGTLLMSYK--GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA 91 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 91 (343)
|++|+|||..+|+.+..+. +|.. .|++++|+|+|.++++|+.||.|++||+++++.+..+.+|...+.+++++ +.
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~-~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~ 200 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGE-YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY 200 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred CCEEEEEECCCCCEEEEEEecCCCC-cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence 8999999999999887765 4566 89999999999999999999999999999999998888999999998874 66
Q ss_pred EEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867 92 YIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV 169 (343)
Q Consensus 92 ~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
+|++ +.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.|+.+++|+...+....
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~-------------- 266 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW-------------- 266 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS--------------
T ss_pred EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc--------------
Confidence 7776 68999999998765 5567888999999999999999999999999999999998764322
Q ss_pred ccccceeeeecccccceEEEEeecCCCceEEEE--eeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc--
Q psy10867 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS--VSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-- 245 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-- 245 (343)
..+.....|...|.+++|+|.+. .++++ |+.|++|++||+++++....+.....+.++.|+|+++.+++++
T Consensus 267 ----~~~~~~~~~~~~V~~~~~~p~~~-~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 267 ----VPLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp ----CCSEEECCCSSCEEEEEECTTCT-TEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred ----eeeeeecccCCceeeeeeCCCcc-cEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEec
Confidence 24556678999999999999875 55554 4679999999999999999999999999999999999988764
Q ss_pred CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867 246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324 (343)
Q Consensus 246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~ 324 (343)
.|+.|++||+.+... +..+.+|.+.|++++|+|||++|++|+.|++|++||+....+....+ +...+.
T Consensus 342 ~d~~I~iwd~~~~~~-----------v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 342 AQNQLVIWKYPTMAK-----------VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp TTCCEEEEETTTCCE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred CCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 799999999987543 55688999999999999999999999999999999998776665555 444433
Q ss_pred EEEE
Q psy10867 325 GAFL 328 (343)
Q Consensus 325 ~~~~ 328 (343)
...|
T Consensus 411 ~~s~ 414 (420)
T 4gga_A 411 KSSL 414 (420)
T ss_dssp ----
T ss_pred cccc
Confidence 3333
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-43 Score=290.58 Aligned_cols=284 Identities=16% Similarity=0.166 Sum_probs=243.2
Q ss_pred CCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCccc-----ceecccCCcceEEEEECCCCCEEEE-
Q psy10867 23 KGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEK-----AQLRLICPGRISSMQASPDAAYIAV- 95 (343)
Q Consensus 23 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~- 95 (343)
++.++..+|++|.+ .|++++|+|+ +.+|++++.|++|+|||+.+.+. ...+.+|...|.+++|+|++++|++
T Consensus 26 ~~~~l~~tL~GH~~-~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 26 EQMTLRGTLKGHNG-WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEEEECCCSS-CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEEECCccC-CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 44566778999999 9999999997 68999999899999999876543 3556789999999999999999997
Q ss_pred ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867 96 SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP 175 (343)
Q Consensus 96 ~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (343)
+.|+.|++|+............+...+..+.+++++++|++++.|+.+++||+..... .
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---------------------~ 163 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---------------------Y 163 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---------------------E
T ss_pred cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---------------------E
Confidence 6899999999999988888888889999999999999999999999999999876532 3
Q ss_pred eeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Q psy10867 176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFC 254 (343)
Q Consensus 176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 254 (343)
.....+|...+..++|++++...++++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++|+.|+.|++||
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3445678999999999988765788999999999999999999888876 788999999999999999999999999999
Q ss_pred eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----------cCCceE
Q psy10867 255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----------HKGPVL 324 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~v~ 324 (343)
++..... ..+. +...+.+++|+|++. +++++.|+.|++||++++..+..+. |...|+
T Consensus 244 ~~~~~~~-----------~~~~-~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 244 LNEGKHL-----------YTLD-GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp TTTTEEE-----------EEEE-CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEE
T ss_pred eccCcee-----------eeec-CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEE
Confidence 9875443 2233 456799999999876 5556679999999999887665542 678899
Q ss_pred EEEEccCCCeeeecccC
Q psy10867 325 GAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 325 ~~~~sp~~~~l~~~~~~ 341 (343)
+++|+|++++|++++..
T Consensus 311 ~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEEECTTSSEEEEEETT
T ss_pred EEEECCCCCEEEEEeCC
Confidence 99999999999998754
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.1e-44 Score=299.74 Aligned_cols=293 Identities=13% Similarity=0.088 Sum_probs=240.7
Q ss_pred EEecCCceEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECC-CCCEEE
Q psy10867 19 VWEPKGGTLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASP-DAAYIA 94 (343)
Q Consensus 19 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~l~ 94 (343)
+|++...+....+.+|.. .|.+++|+|++ .++++++.||.|++||+.+++....+. +|...|.+++|+| ++++|+
T Consensus 57 ~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDR-RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLF 135 (383)
T ss_dssp HHHHTTCEEEEEECCCSS-CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEE
T ss_pred cccccccceEEeccCCCC-CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEE
Confidence 455667788889999999 99999999998 889998888999999999887765554 6999999999999 677887
Q ss_pred E-ecCCeEEEEEccCCceEEEecc---cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867 95 V-SIETKLHMWQISSGRLLATASS---HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170 (343)
Q Consensus 95 ~-~~d~~i~v~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
+ +.|+.|++||+.+ ..+..+.. |...|.+++|+|++++|++++.|+.|++||++..
T Consensus 136 s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------------------- 195 (383)
T 3ei3_B 136 VSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH------------------- 195 (383)
T ss_dssp EEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC-------------------
T ss_pred EEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC-------------------
Confidence 6 6899999999986 45555544 4478999999999999999999999999999542
Q ss_pred cccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC----CceEEEeecCCcEEEEEEcC-CCCEEEEEc
Q psy10867 171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT----GEDLLSLILDTRLTCVAFDG-TEDNIYMGT 245 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~----~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 245 (343)
.+..+..|...|.+++|+|+++ .++++++.|+.|++||+++ ++.+..+.+...+.+++|+| ++++|++++
T Consensus 196 ----~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 196 ----EIFKEKLHKAKVTHAEFNPRCD-WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp ----EEEEEECSSSCEEEEEECSSCT-TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred ----EEEEeccCCCcEEEEEECCCCC-CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence 5666778999999999999983 2899999999999999998 66777778899999999999 999999999
Q ss_pred CCCcEEEEEeecccccccccccCC------CCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-
Q psy10867 246 SEGVIKSFCLRQVPRTRDHHIQDS------TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ- 318 (343)
Q Consensus 246 ~d~~i~i~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~- 318 (343)
.|+.|++||+++............ ..+...-.....+..++|+|++++ +++.|+.|++||+.+++.+..+.
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 999999999988665433221100 000000111244556778888877 88899999999999999999887
Q ss_pred --cCCceEEEEEccCCCeeeecc
Q psy10867 319 --HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 319 --~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+.+.+..++|+|++++|++++
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEEE
T ss_pred CCCCceEEEEEEecCccEEEEec
Confidence 456778889999999999885
No 41
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-43 Score=292.00 Aligned_cols=289 Identities=14% Similarity=0.151 Sum_probs=251.6
Q ss_pred eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867 26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW 104 (343)
Q Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~ 104 (343)
.....+.+|.. .|++++|+|++.++++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++ +.|+.|++|
T Consensus 23 ~~~~~l~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 23 MKAIKLTGHER-PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEEEEECCSS-CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred cccEEEEEeec-eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 34566899999 9999999999999999998899999999999988888899999999999999999987 689999999
Q ss_pred EccCCceEEEecccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
|+.+++.+..+. +...+.+++|+|+++++++++.+ |.|++||+........+.. ........+
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-----------~~~~~~~~~ 169 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK-----------VSEEPIHKI 169 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-----------ECSSCSEEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-----------cccceeeec
Confidence 999999988887 88899999999999999999998 9999999987644332210 011234445
Q ss_pred ccccc--ceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 180 SQHSL--PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 180 ~~~~~--~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
..|.. .+.+++|+|++ .++++++.||.|++||+++ ++.+..+. +...+.+++|+|++++|++++.|+.|++||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKG--KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp ECCTTCCCEEEEEECGGG--CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCcCccceeEEEEcCCC--CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 56666 99999999998 7999999999999999998 67777766 7888999999999999999999999999999
Q ss_pred ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC--------------cEEEEecccceeeeecc-cC
Q psy10867 256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE--------------TLKIWHTISRQCLRTIQ-HK 320 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~-~~ 320 (343)
+...... .+. +...+..++|+|+++++++++.++ .+++||+.+++.+..+. |.
T Consensus 248 ~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 315 (369)
T 3zwl_B 248 STLQVLK-----------KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF 315 (369)
T ss_dssp TTCCEEE-----------EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS
T ss_pred CCCceee-----------eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc
Confidence 8754432 232 678899999999999999999988 89999999999999998 99
Q ss_pred CceEEEEEccCCCeeeecccC
Q psy10867 321 GPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 321 ~~v~~~~~sp~~~~l~~~~~~ 341 (343)
..|++++|+|++++|++++..
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCEEEEEcCC
Confidence 999999999999999998754
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-43 Score=294.68 Aligned_cols=279 Identities=17% Similarity=0.215 Sum_probs=243.4
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
+|+++.|++++ ||.|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.||.|++||+.+++.+..+
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW 112 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 45555555554 89999999999999999999999 9999999999999999998899999999999887766
Q ss_pred ccCCcceEEEEECCCCCEEEE-ecC-----CeEEEEEccCCc-----------eEEEecccCC--CeEEEEEecCCCEEE
Q psy10867 75 LICPGRISSMQASPDAAYIAV-SIE-----TKLHMWQISSGR-----------LLATASSHYQ--PITIVKWSADSNFIV 135 (343)
Q Consensus 75 ~~~~~~v~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~l~ 135 (343)
. +...|.+++|+|+++++++ +.+ +.|++||+..+. ....+..|.+ .+.+++|+|++++|+
T Consensus 113 ~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (369)
T 3zwl_B 113 K-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII 191 (369)
T ss_dssp E-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred e-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence 5 8889999999999999997 456 899999998663 3344455665 899999999999999
Q ss_pred EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867 136 TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC 215 (343)
Q Consensus 136 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 215 (343)
+++.||.|++||+++.. +....+..|...|.+++|+|++ .+|++++.|+.|++||++
T Consensus 192 ~~~~dg~i~i~d~~~~~---------------------~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNNY---------------------EYVDSIDLHEKSISDMQFSPDL--TYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp EEETTSEEEEEETTTTT---------------------EEEEEEECCSSCEEEEEECTTS--SEEEEEETTSEEEEEETT
T ss_pred EEcCCCEEEEEECCCCc---------------------EeEEEEecCCCceeEEEECCCC--CEEEEecCCceEEEEECC
Confidence 99999999999998731 2555667799999999999998 899999999999999999
Q ss_pred CCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC--------------cEEEEEeecccccccccccCCCCCCccccccCc
Q psy10867 216 TGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG--------------VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ 281 (343)
Q Consensus 216 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (343)
+++.+..+.+...+..++|+|+++++++++.++ .+++||+..... +..+.+|...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----------~~~~~~~~~~ 317 (369)
T 3zwl_B 249 TLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE-----------IGRVQGHFGP 317 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE-----------EEEEECCSSC
T ss_pred CCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc-----------hhheecccCc
Confidence 999999999999999999999999999999888 788998876443 4567789999
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317 (343)
Q Consensus 282 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 317 (343)
|++++|+|++++|++++.||.|++|+++++.....+
T Consensus 318 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 318 LNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 999999999999999999999999999887655444
No 43
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-43 Score=336.31 Aligned_cols=336 Identities=12% Similarity=0.135 Sum_probs=275.4
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
.|.++.|++++ ||.|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED-EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC-CEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 45566666554 89999999999999999999999 9999999999999999999999999999999998888
Q ss_pred ccCCcceEEEEECCC--CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867 75 LICPGRISSMQASPD--AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 75 ~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
..|...|.+++|+|+ +.++++ +.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++++++++.||.|++||+.++
T Consensus 696 ~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 899999999999994 456776 68999999999999999999999999999999999999999999999999999988
Q ss_pred ceeeeeecCCCCCC--------------------CCc-------------cccccceeeeecccccceEEEEeecCCCce
Q psy10867 152 ICKQTVAFGIPGSS--------------------GKG-------------VTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198 (343)
Q Consensus 152 ~~~~~~~~~~~~~~--------------------~~~-------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 198 (343)
.....+........ +.. ............+|...|.+++|+|++ .
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~ 853 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--H 853 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST--T
T ss_pred cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC--C
Confidence 76655542211000 000 000111122233788999999999999 8
Q ss_pred EEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc-----------
Q psy10867 199 RVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI----------- 266 (343)
Q Consensus 199 ~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------- 266 (343)
++++++.|+.|++||+.+++.+..+. |...|.+++|+|+++++++++.|+.|++||+...........
T Consensus 854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1249)
T 3sfz_A 854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQEN 933 (1249)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETT
T ss_pred EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCC
Confidence 99999999999999999998888776 778899999999999999999999999999875322111000
Q ss_pred ---------------cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEcc
Q psy10867 267 ---------------QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGL 330 (343)
Q Consensus 267 ---------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 330 (343)
...........+...+.+++|+|+++++++|+.||.|++||+.+++.+..+. |...|++++|+|
T Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~ 1013 (1249)
T 3sfz_A 934 ETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA 1013 (1249)
T ss_dssp EEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS
T ss_pred CcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC
Confidence 0000001112235679999999999999999999999999999999988888 999999999999
Q ss_pred CCCeeeecccC
Q psy10867 331 LPPAIHDYDFT 341 (343)
Q Consensus 331 ~~~~l~~~~~~ 341 (343)
++++|++++..
T Consensus 1014 dg~~l~s~~~d 1024 (1249)
T 3sfz_A 1014 DGKTLISSSED 1024 (1249)
T ss_dssp SSSCEEEECSS
T ss_pred CCCEEEEEcCC
Confidence 99999998753
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.4e-43 Score=301.53 Aligned_cols=289 Identities=16% Similarity=0.253 Sum_probs=249.4
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ 85 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 85 (343)
..+++++.||.|++||+.+++.+..+.+|.. .|.+++|+|++ ++++++.||+|++||+.+++.+..+.+|...|.+++
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 210 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDG-GVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD 210 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEeCCCc-CEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEE
Confidence 4677888899999999999999999999999 99999999998 666777779999999999998888889999999999
Q ss_pred EC--CCCCEEEE-ecCCeEEEEEccCCc-----------------------eEEEecccCCCeEEEEEecCCCEEEEecC
Q psy10867 86 AS--PDAAYIAV-SIETKLHMWQISSGR-----------------------LLATASSHYQPITIVKWSADSNFIVTGGE 139 (343)
Q Consensus 86 ~s--~~~~~l~~-~~d~~i~v~~~~~~~-----------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 139 (343)
|+ +++.++++ +.|+.|++||+.++. .+..+.+|...+.++ +++++++++++.
T Consensus 211 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~ 288 (464)
T 3v7d_B 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY 288 (464)
T ss_dssp EEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET
T ss_pred EecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC
Confidence 98 57777776 689999999998765 255677888888877 578899999999
Q ss_pred CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED 219 (343)
Q Consensus 140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 219 (343)
||.|++||+++++ .+..+.+|...|.+++|+|++ .++++++.|+.|++||+++++.
T Consensus 289 d~~i~vwd~~~~~----------------------~~~~~~~~~~~v~~~~~~~~~--~~l~sg~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 289 DNTLIVWDVAQMK----------------------CLYILSGHTDRIYSTIYDHER--KRCISASMDTTIRIWDLENGEL 344 (464)
T ss_dssp TSCEEEEETTTTE----------------------EEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEEEETTTTEE
T ss_pred CCeEEEEECCCCc----------------------EEEEecCCCCCEEEEEEcCCC--CEEEEEeCCCcEEEEECCCCcE
Confidence 9999999998864 455667899999999999998 7999999999999999999999
Q ss_pred EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe
Q psy10867 220 LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS 298 (343)
Q Consensus 220 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 298 (343)
+..+. |...+.+++|+ +++|++++.||.|++||+.+..... ...|...+..++|+|++++|++++
T Consensus 345 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 345 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF------------SYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE------------EEECTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee------------eecCCCCccEEEEEeCCCEEEEec
Confidence 98887 78889999998 5899999999999999998754321 113566778889999999999998
Q ss_pred CCCcEEEEecccceeeeec-c-cCCceEEEEEccCCCeeeecc
Q psy10867 299 ADETLKIWHTISRQCLRTI-Q-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 299 ~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
||.|++||+.+++.+..+ . +...|.+++|+ ++.+++++
T Consensus 411 -dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~ 450 (464)
T 3v7d_B 411 -ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAV 450 (464)
T ss_dssp -TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEE
T ss_pred -CCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEE
Confidence 899999999999999863 3 88999999997 45555543
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.6e-43 Score=284.22 Aligned_cols=254 Identities=13% Similarity=0.152 Sum_probs=210.8
Q ss_pred EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--ccceecccCCcceEEEEECCC--CCEEEE-ecCCeEEE
Q psy10867 29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--EKAQLRLICPGRISSMQASPD--AAYIAV-SIETKLHM 103 (343)
Q Consensus 29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~v 103 (343)
..+.+|.. .|.+++|+|+|+++++++.|++|+||++.+. +.+..+.+|.++|.+++|+|+ +++|++ +.|++|++
T Consensus 3 ~~~~~h~~-~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNE-MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSS-CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcC-ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 45778998 9999999999999999999999999999753 556778899999999999864 788887 68999999
Q ss_pred EEccCCc--eEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 104 WQISSGR--LLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 104 ~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++..... ....+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~--------------------~~~~~ 141 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT--------------------SPIII 141 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB--------------------CCEEE
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce--------------------eeeee
Confidence 9998874 55677889999999999997 889999999999999999864211 12455
Q ss_pred cccccceEEEEeecCCC-----------ceEEEEeeCCCeEEEEecCCCc----eEEEee-cCCcEEEEEEcCCC---CE
Q psy10867 180 SQHSLPVTHVTLSKLGA-----------KSRVASVSHDRTCKIFDLCTGE----DLLSLI-LDTRLTCVAFDGTE---DN 240 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~-----------~~~l~~~~~d~~i~~wd~~~~~----~~~~~~-~~~~i~~~~~~~~~---~~ 240 (343)
.+|...|.+++|+|++. +.+|++++.|++|++||+++++ ....+. |...|.+++|+|++ ++
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~ 221 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE
Confidence 68999999999999731 1689999999999999998876 344454 77889999999985 89
Q ss_pred EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
|++++.|+.|++||++......... ......|...|.+++|+|++++||+++.|+.|++|+..
T Consensus 222 las~s~D~~v~iWd~~~~~~~~~~~------~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 222 MASVSQDRTCIIWTQDNEQGPWKKT------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEE------ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEECCCcEEEEEeCCCCCcccee------eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9999999999999997643211100 11124678899999999999999999999999999976
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3e-43 Score=315.82 Aligned_cols=283 Identities=15% Similarity=0.152 Sum_probs=238.1
Q ss_pred eEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeEEEEeCCCcc-----cceecccCCcceEEEEECCCCCEEEE-ecC
Q psy10867 26 TLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMIQAWPVNSQE-----KAQLRLICPGRISSMQASPDAAYIAV-SIE 98 (343)
Q Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d 98 (343)
+....+++|.+ .|++++|+|++ .++++++.|++|++|++.+.. ....+.+|...|.+++|+|++++|++ +.|
T Consensus 373 ~~~~~l~~H~~-~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 373 VLKGTMRAHTD-MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEEEECCSS-CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred chhhhcccCCc-eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 34557899999 99999999864 788899888999999987643 23456789999999999999999997 679
Q ss_pred CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867 99 TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178 (343)
Q Consensus 99 ~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (343)
+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+....... ....
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-------------------~~~~ 512 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT-------------------ISEG 512 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-------------------ECSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-------------------eccC
Confidence 999999999999999999999999999999999999999999999999986542211 1112
Q ss_pred ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
..+|...|.+++|+|++....+++++.|+.|++||+++++....+. |...|.+++|+|++++|++|+.||.|++||+++
T Consensus 513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 513 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 2468899999999998744689999999999999999999888776 788899999999999999999999999999987
Q ss_pred ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cC----------------
Q psy10867 258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HK---------------- 320 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~---------------- 320 (343)
..... .+. +...|.+++|+|++.+|++++ ++.|++||+++++.+..+. +.
T Consensus 593 ~~~~~-----------~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (694)
T 3dm0_A 593 GKKLY-----------SLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK 659 (694)
T ss_dssp TEEEE-----------CCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred CceEE-----------Eec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence 65432 222 346799999999998887766 5569999999998887664 11
Q ss_pred ---CceEEEEEccCCCeeeecccC
Q psy10867 321 ---GPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 321 ---~~v~~~~~sp~~~~l~~~~~~ 341 (343)
..+++++|+|+|++|++++..
T Consensus 660 ~~~~~~~~l~~spdg~~l~sgs~D 683 (694)
T 3dm0_A 660 RKVIYCTSLNWSADGSTLFSGYTD 683 (694)
T ss_dssp -CCCCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEeeeEEEcCCCCEEEEEcCC
Confidence 137899999999999998753
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.7e-43 Score=293.64 Aligned_cols=303 Identities=15% Similarity=0.117 Sum_probs=238.0
Q ss_pred ccceEEEecCC--------CCeEEEEecCCce--EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ 72 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~ 72 (343)
+|.++.|++++ ||.|++||+.+++ .+..+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++...
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 45556555554 8999999999887 8899999999 99999999999999999988999999998876443
Q ss_pred --ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCce----EEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867 73 --LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL----LATASSHYQPITIVKWSADSNFIVTGGEDGTICV 145 (343)
Q Consensus 73 --~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 145 (343)
....|...|.+++|+|++++|++ +.|+.|++||+..+.. ......|...|.+++|+|++++|++++.||.|++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 33578899999999999999987 6789999999998863 3334678999999999999999999999999999
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI- 224 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~- 224 (343)
||++......... ...........+.+..+..|...|.+++|+|++ .+|++++.|+.|++||+++++.+..+.
T Consensus 169 ~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 169 FSAYIKEVEERPA----PTPWGSKMPFGELMFESSSSCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp EECCCTTTSCCCC----CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS--SEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred EEccccccccccc----ccccccccchhhheEecCCCCCeEEEEEECCCC--CEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 9986432111000 000000011234666777899999999999998 799999999999999999999988887
Q ss_pred cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec--cc--cccccc-------------------ccCCCCC------Ccc
Q psy10867 225 LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ--VP--RTRDHH-------------------IQDSTSN------PDF 275 (343)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~--~~~~~~-------------------~~~~~~~------~~~ 275 (343)
+..++.+++|+|++++++++ .|+.|++|++.. .. ...... ...+... ..+
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 56689999999999988888 899999999987 21 000000 0001111 223
Q ss_pred -ccccCcEEEEEEc-cCC---CEEEEEeCCCcEEEEeccccee
Q psy10867 276 -IGHEKQVTSLSCS-ITG---ITLLSSSADETLKIWHTISRQC 313 (343)
Q Consensus 276 -~~~~~~v~~~~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~ 313 (343)
.+|...|++++|+ ++| ++|++++.||.|++||+.+++.
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 4899999999966 666 9999999999999999987654
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-42 Score=286.29 Aligned_cols=278 Identities=19% Similarity=0.223 Sum_probs=231.7
Q ss_pred EEEecCCCCeEEEEecCCc-----eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce
Q psy10867 7 VAFSYDGSGAISVWEPKGG-----TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI 81 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v 81 (343)
+++|++.||+|+|||+.++ .+...+++|.. .|.+++|+|++.++++++.|+.|++|+............+...+
T Consensus 53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~-~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 131 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV 131 (340)
T ss_dssp EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC-CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCce
Confidence 4555555899999998753 46778999999 99999999999999999999999999999988887777888899
Q ss_pred EEEEECCCCCEEEE-ecCCeEEEEEccCCce-EEEecccCCCeEEEEEecCC--CEEEEecCCCeEEEeecCccceeeee
Q psy10867 82 SSMQASPDAAYIAV-SIETKLHMWQISSGRL-LATASSHYQPITIVKWSADS--NFIVTGGEDGTICVWQLSRLICKQTV 157 (343)
Q Consensus 82 ~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~ 157 (343)
..+.+++++.+|++ +.|+.+++||+..... .....+|...+..++|++++ .++++++.|+.|++||+++..
T Consensus 132 ~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~----- 206 (340)
T 4aow_A 132 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK----- 206 (340)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-----
T ss_pred eEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-----
Confidence 99999999998887 6899999999876644 34456899999999998854 578899999999999999864
Q ss_pred ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC
Q psy10867 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT 237 (343)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~ 237 (343)
....+.+|...|++++|+|++ .+|++++.|+.|++||+++.+.+..+.+...+.+++|+|+
T Consensus 207 -----------------~~~~~~~h~~~v~~~~~s~~~--~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 267 (340)
T 4aow_A 207 -----------------LKTNHIGHTGYLNTVTVSPDG--SLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 267 (340)
T ss_dssp -----------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred -----------------eeeEecCCCCcEEEEEECCCC--CEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC
Confidence 455567899999999999999 8999999999999999999999999999999999999998
Q ss_pred CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 312 (343)
+.++ +++.|+.|++||++......... .........+|...|++++|+|++++|++|+.||.|++||+++|+
T Consensus 268 ~~~~-~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 268 RYWL-CAATGPSIKIWDLEGKIIVDELK--QEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSEE-EEEETTEEEEEETTTTEEEEEEC--CC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred Ccee-eccCCCEEEEEECCCCeEEEecc--ccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 7655 55579999999988654332221 112233456789999999999999999999999999999999885
No 49
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=291.61 Aligned_cols=283 Identities=16% Similarity=0.179 Sum_probs=234.1
Q ss_pred EEEEecCCCCcceEEEEeCCc-eEEEEEcC---CCeEEEEeCCCccccee-cccCCcceEEEEECCC---CCEEEE-ecC
Q psy10867 28 LMSYKGASVLSPHSMCLLGND-YVLGVEKG---KPMIQAWPVNSQEKAQL-RLICPGRISSMQASPD---AAYIAV-SIE 98 (343)
Q Consensus 28 ~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~---~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~---~~~l~~-~~d 98 (343)
...+++|.. .|.+++|+|++ .++++++. |+.|++||+.+++.... ...|...|.+++|+|+ +.+|++ +.|
T Consensus 11 ~~~~~~h~~-~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 11 AHIQKGFNY-TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEEECSS-CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhhccCCCC-ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 344577988 99999999988 67777765 79999999998876533 3378999999999998 577776 679
Q ss_pred CeEEEEEccCCc-eEEEecccCCCeEEEEE------ecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867 99 TKLHMWQISSGR-LLATASSHYQPITIVKW------SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG 171 (343)
Q Consensus 99 ~~i~v~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (343)
+.|++||+.+++ .+..+.+|...|.+++| +|++++|++++.||.|++||+++...
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~------------------ 151 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD------------------ 151 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS------------------
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC------------------
Confidence 999999999988 88889999999999965 67899999999999999999988641
Q ss_pred ccceeeeeccc----ccceEEEE----eecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcC---CCCE
Q psy10867 172 LTEPLHVKSQH----SLPVTHVT----LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG---TEDN 240 (343)
Q Consensus 172 ~~~~~~~~~~~----~~~v~~~~----~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~---~~~~ 240 (343)
+...+..| ...+.+++ |+|++ .++++++.|+.|++||+++++......+...+.+++|+| ++++
T Consensus 152 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 226 (357)
T 3i2n_A 152 ---PVANMEPVQGENKRDCWTVAFGNAYNQEE--RVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNK 226 (357)
T ss_dssp ---CSEEECCCTTSCCCCEEEEEEECCCC-CC--CEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCE
T ss_pred ---cceeccccCCCCCCceEEEEEEeccCCCC--CEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCE
Confidence 22233333 33788888 67888 899999999999999999999887777899999999999 9999
Q ss_pred EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecccc--------
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTISR-------- 311 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~-------- 311 (343)
+++++.||.|++||++......... ...+.+|...|++++|+|+++ +|++++.||.|++||+.++
T Consensus 227 l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRTQHPTKGFA------SVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp EEEEESTTEEEEEEEEEEETTTEEE------EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred EEEECCCCeEEEEeCcCCCccccee------eeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 9999999999999999865432211 112348999999999999998 8999999999999999854
Q ss_pred -----------eeeeecc-cCCceEEEEEccCCCeee-eccc
Q psy10867 312 -----------QCLRTIQ-HKGPVLGAFLGLLPPAIH-DYDF 340 (343)
Q Consensus 312 -----------~~~~~~~-~~~~v~~~~~sp~~~~l~-~~~~ 340 (343)
+.+..+. |..+|++++|+|++++|+ +++.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~ 342 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF 342 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC
Confidence 3555666 899999999999999998 6664
No 50
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-42 Score=295.48 Aligned_cols=291 Identities=18% Similarity=0.256 Sum_probs=251.6
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ 85 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 85 (343)
..+++++.||.|++||+.+++.+..+.+|.. .|.+++|+ +.++++++.||.|++||+.+++.+..+..|...|.+++
T Consensus 130 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 206 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 206 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEECCCCSS-CEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCC-CEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEE
Confidence 4567888899999999999999999999999 99999998 44777777779999999999998888889999999999
Q ss_pred ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867 86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
|+ +..+++ +.|+.|++||+.+++.+..+.+|...|.+++| +++++++|+.||.|++||++++.
T Consensus 207 ~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~------------ 270 (445)
T 2ovr_B 207 LH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET------------ 270 (445)
T ss_dssp EE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE------------
T ss_pred ec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc------------
Confidence 96 445554 78999999999999999999999999999999 78899999999999999998864
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEE
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYM 243 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~ 243 (343)
.+..+.+|...|.+++| ++ .++++++.|+.|++||+++++.+..+. +...+.++.++ ++++++
T Consensus 271 ----------~~~~~~~~~~~v~~~~~--~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 334 (445)
T 2ovr_B 271 ----------CLHTLQGHTNRVYSLQF--DG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVS 334 (445)
T ss_dssp ----------EEEEECCCSSCEEEEEE--CS--SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEE
T ss_pred ----------EeEEecCCCCceEEEEE--CC--CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEE
Confidence 45556689999999999 55 789999999999999999999988876 66778887775 679999
Q ss_pred EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec------
Q psy10867 244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI------ 317 (343)
Q Consensus 244 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------ 317 (343)
|+.||.|++||+++......+ .....|...|++++|+ +++|++++.||.|++||+.+++.+..+
T Consensus 335 ~~~dg~i~vwd~~~~~~~~~~--------~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 404 (445)
T 2ovr_B 335 GNADSTVKIWDIKTGQCLQTL--------QGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 404 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEE--------CSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTG
T ss_pred EeCCCeEEEEECCCCcEEEEE--------ccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccC
Confidence 999999999999875443221 1112388899999995 579999999999999999999998887
Q ss_pred ccCCceEEEEEccCCCeeeecccC
Q psy10867 318 QHKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 318 ~~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
.+.+.|++++|+|++.+|++++..
T Consensus 405 ~~~~~v~~~~~s~~~~~la~~~~d 428 (445)
T 2ovr_B 405 GSGGVVWRIRASNTKLVCAVGSRN 428 (445)
T ss_dssp GGTCEEEEEEECSSEEEEEEECSS
T ss_pred CCCceEEEEEecCCEEEEEEcccC
Confidence 278899999999999999988753
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.6e-43 Score=286.31 Aligned_cols=268 Identities=13% Similarity=0.170 Sum_probs=231.0
Q ss_pred ccceEEEecCC-------CCeEEEEecCCceE---EEEEe--cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-
Q psy10867 3 LLNEVAFSYDG-------SGAISVWEPKGGTL---LMSYK--GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE- 69 (343)
Q Consensus 3 ~v~~~~~s~~~-------dg~i~iwd~~~~~~---~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~- 69 (343)
+|.++.|++++ ||.|++||+.+++. +..+. .|.. .|.+++|+|++.++++++.|+.|++||+.+++
T Consensus 53 ~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN-YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP 131 (337)
T ss_dssp CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTS-BEEEEEECTTSSEEEEEESSSEEEEEECCCC--
T ss_pred ceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCC-cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc
Confidence 34555555544 89999999987653 33333 6777 99999999999999998888999999999877
Q ss_pred -cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867 70 -KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ 147 (343)
Q Consensus 70 -~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 147 (343)
....+..|...|.+++|+|++++|++ +.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.||.|++||
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 132 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence 44556688899999999999998887 6789999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC
Q psy10867 148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT 227 (343)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 227 (343)
+++++.... ..+...+.+++|+|++ .++++++.++.|++||+++++......+..
T Consensus 212 ~~~~~~~~~-----------------------~~~~~~v~~~~~s~~~--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 266 (337)
T 1gxr_A 212 LREGRQLQQ-----------------------HDFTSQIFSLGYCPTG--EWLAVGMESSNVEVLHVNKPDKYQLHLHES 266 (337)
T ss_dssp TTTTEEEEE-----------------------EECSSCEEEEEECTTS--SEEEEEETTSCEEEEETTSSCEEEECCCSS
T ss_pred CCCCceEee-----------------------ecCCCceEEEEECCCC--CEEEEEcCCCcEEEEECCCCCeEEEcCCcc
Confidence 998754332 2367889999999999 899999999999999999988776666889
Q ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
.+.+++|+|++++|++++.||.|++||+...... ....|...+.+++|+|++++|++++.||.|++|+
T Consensus 267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI------------FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE------------EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE------------EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 9999999999999999999999999999875432 2235788999999999999999999999999999
Q ss_pred c
Q psy10867 308 T 308 (343)
Q Consensus 308 ~ 308 (343)
+
T Consensus 335 ~ 335 (337)
T 1gxr_A 335 V 335 (337)
T ss_dssp E
T ss_pred E
Confidence 7
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-43 Score=297.29 Aligned_cols=308 Identities=14% Similarity=0.151 Sum_probs=238.8
Q ss_pred ecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeC----CCcc------cceeccc--
Q psy10867 10 SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPV----NSQE------KAQLRLI-- 76 (343)
Q Consensus 10 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~----~~~~------~~~~~~~-- 76 (343)
..+....+.+|++...........|.. .|.+++|+|++. ++++++.||.|++|++ .+++ ....+..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (425)
T 1r5m_A 20 EDDTNSIDSSDDLDGFVKILKEIVKLD-NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPF 98 (425)
T ss_dssp --------------CCCEECEEEEECS-CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCC
T ss_pred cCccccccccccchhhhhheeeeeccC-ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccc
Confidence 333445678899877666666666777 999999999999 9999999999999999 8777 2332222
Q ss_pred --------CCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEee
Q psy10867 77 --------CPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQ 147 (343)
Q Consensus 77 --------~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 147 (343)
|.+.|.+++|+|++++|++ +.|+.|++|| .+++.+..+..|...|.+++|+|++++|++++.||.|++||
T Consensus 99 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 99 ALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp CCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred cccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 6779999999999999997 6789999999 67888899999999999999999999999999999999999
Q ss_pred cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cC
Q psy10867 148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LD 226 (343)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~ 226 (343)
+.++.....+......... ............+.+++|+|++ .+++++.++.|++||+++++.+..+. +.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 247 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSS-------INAENHSGDGSLGVDVEWVDDD---KFVIPGPKGAIFVYQITEKTPTGKLIGHH 247 (425)
T ss_dssp TTTTEEEEEECCC----------------------CCCBSCCEEEETT---EEEEECGGGCEEEEETTCSSCSEEECCCS
T ss_pred CCCCcEEEEeeccccCccc-------eeeccccCCcceeeEEEEcCCC---EEEEEcCCCeEEEEEcCCCceeeeeccCC
Confidence 9987655443211000000 0000011122228899999986 68899999999999999998887776 77
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867 227 TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW 306 (343)
Q Consensus 227 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 306 (343)
..+.+++|+|++++|++++.|+.|++||++.... ...+.+|...|.+++|+|++ ++++++.|+.|++|
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS-----------QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLW 315 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC-----------SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc-----------ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEE
Confidence 8899999999999999999999999999887543 44567799999999999999 99999999999999
Q ss_pred ecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 307 HTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 307 d~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|+.+++.+..+. |...|.+++|+|++++|++++..
T Consensus 316 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 316 SLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 999999999888 88999999999999999998754
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.6e-43 Score=315.26 Aligned_cols=278 Identities=21% Similarity=0.237 Sum_probs=230.9
Q ss_pred eEEEecCCCCeEEEEecCC-----ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc
Q psy10867 6 EVAFSYDGSGAISVWEPKG-----GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR 80 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~ 80 (343)
.+++|++.||.|++||+.+ +.....+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++....+.+|...
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH-FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CEEEEEeCCCcEEEEEccCCCcccccccceecCCCC-cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 4677888899999999875 456778999999 9999999999999999999999999999999888888899999
Q ss_pred eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEe---cccCCCeEEEEEecCC--CEEEEecCCCeEEEeecCcccee
Q psy10867 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATA---SSHYQPITIVKWSADS--NFIVTGGEDGTICVWQLSRLICK 154 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~ 154 (343)
|.+++|+|++++|++ +.|++|++||+......... .+|...|.+++|+|++ ..+++++.|+.|++||+++..
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-- 552 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-- 552 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--
Confidence 999999999998887 68999999998655433332 4688899999999986 589999999999999998763
Q ss_pred eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEE
Q psy10867 155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234 (343)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~ 234 (343)
....+.+|...|.+++|+|++ .+|++++.|+.|++||+++++.+..+.....+.+++|
T Consensus 553 --------------------~~~~~~~h~~~v~~v~~spdg--~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 610 (694)
T 3dm0_A 553 --------------------LRSTLAGHTGYVSTVAVSPDG--SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 610 (694)
T ss_dssp --------------------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEE
T ss_pred --------------------EEEEEcCCCCCEEEEEEeCCC--CEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEE
Confidence 445667899999999999999 8999999999999999999999888888889999999
Q ss_pred cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC--------CccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867 235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN--------PDFIGHEKQVTSLSCSITGITLLSSSADETLKIW 306 (343)
Q Consensus 235 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 306 (343)
+|++.++++++ ++.|++||+++............... .....+...+++++|+|+|++|++|+.||.|++|
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence 99998888765 56699999987654433221110000 0011122347899999999999999999999999
Q ss_pred ecc
Q psy10867 307 HTI 309 (343)
Q Consensus 307 d~~ 309 (343)
++.
T Consensus 690 ~i~ 692 (694)
T 3dm0_A 690 GIG 692 (694)
T ss_dssp EC-
T ss_pred ecc
Confidence 985
No 54
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2e-42 Score=306.84 Aligned_cols=322 Identities=16% Similarity=0.201 Sum_probs=250.3
Q ss_pred ccceEEEecCCC------------CeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcc
Q psy10867 3 LLNEVAFSYDGS------------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQE 69 (343)
Q Consensus 3 ~v~~~~~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~ 69 (343)
+|.++.|++++. +.|++|| .++.+..+.+|.. .|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~ 194 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 194 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-CEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc-cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc
Confidence 566777777762 6788888 6788999999999 999999999986 78888888999999999999
Q ss_pred cceecccCCc---ceEEEEECCC-CCEEEE-ecCCeEEEEEccCCceEEEe-c---ccCCCeEEEEEecCCCEEEEecCC
Q psy10867 70 KAQLRLICPG---RISSMQASPD-AAYIAV-SIETKLHMWQISSGRLLATA-S---SHYQPITIVKWSADSNFIVTGGED 140 (343)
Q Consensus 70 ~~~~~~~~~~---~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~s~~~d 140 (343)
....+..|.. .|.+++|+|+ +++|++ +.|+.|++||+.+++.+..+ . .|...|.+++|+ ++++|++++.|
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 8888888998 9999999999 998887 67999999999999999998 6 899999999999 99999999999
Q ss_pred CeEEEeecCccceeeeeecCCCCCC----------C---------Ccc----ccccceeeeecccccc------------
Q psy10867 141 GTICVWQLSRLICKQTVAFGIPGSS----------G---------KGV----TGLTEPLHVKSQHSLP------------ 185 (343)
Q Consensus 141 g~i~iwd~~~~~~~~~~~~~~~~~~----------~---------~~~----~~~~~~~~~~~~~~~~------------ 185 (343)
|.|++||+++++....+........ + ... ....+++..+.+|...
T Consensus 274 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~ 353 (615)
T 1pgu_A 274 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISG 353 (615)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEE
Confidence 9999999998776655543210000 0 000 0001222223333333
Q ss_pred ---------------------eEEEEeecCCC------------------------------------------------
Q psy10867 186 ---------------------VTHVTLSKLGA------------------------------------------------ 196 (343)
Q Consensus 186 ---------------------v~~~~~~~~~~------------------------------------------------ 196 (343)
|.+++| +++.
T Consensus 354 ~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (615)
T 1pgu_A 354 SYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLIL 432 (615)
T ss_dssp ETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEE
T ss_pred CCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEE
Confidence 333333 1120
Q ss_pred -----------------------ceEEEEeeC-CCeEEEEecCCCceE-EEee-cCCcEEEEEEcCCCCEEEEEcCCCcE
Q psy10867 197 -----------------------KSRVASVSH-DRTCKIFDLCTGEDL-LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVI 250 (343)
Q Consensus 197 -----------------------~~~l~~~~~-d~~i~~wd~~~~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i 250 (343)
+.++++++. |+.|++||+.+++.. ..+. +...+.+++|+|++++|++++.|+.|
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 512 (615)
T 1pgu_A 433 QSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKI 512 (615)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeE
Confidence 034555555 666666666555443 2222 57789999999999999999999999
Q ss_pred EEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEcc----------CCCEEEEEeCCCcEEEEecccc-eeeeecc
Q psy10867 251 KSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSI----------TGITLLSSSADETLKIWHTISR-QCLRTIQ 318 (343)
Q Consensus 251 ~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~ 318 (343)
++||+.+... +..+.+ |...|++++|+| ++++|++++.||.|++||+.++ +++..+.
T Consensus 513 ~iw~~~~~~~-----------~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 581 (615)
T 1pgu_A 513 LLYDLQSREV-----------KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN 581 (615)
T ss_dssp EEEETTTTEE-----------EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT
T ss_pred EEeeCCCCcc-----------eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh
Confidence 9999987544 334555 899999999999 9999999999999999999998 7888888
Q ss_pred -cCCceEEEEEccCCCeeeecccC
Q psy10867 319 -HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 319 -~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|...|++++|+|+++ |++++..
T Consensus 582 ~h~~~v~~l~~s~~~~-l~s~~~d 604 (615)
T 1pgu_A 582 AHKDGVNNLLWETPST-LVSSGAD 604 (615)
T ss_dssp SSTTCEEEEEEEETTE-EEEEETT
T ss_pred cCccceEEEEEcCCCC-eEEecCC
Confidence 999999999999999 8888653
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-43 Score=295.21 Aligned_cols=296 Identities=15% Similarity=0.175 Sum_probs=238.5
Q ss_pred cccceEEEecC------------CCCeEEEEecCCceEEEEEec-----CCCCcceEEEEeCC----ceEEEEEcCCCeE
Q psy10867 2 SLLNEVAFSYD------------GSGAISVWEPKGGTLLMSYKG-----ASVLSPHSMCLLGN----DYVLGVEKGKPMI 60 (343)
Q Consensus 2 ~~v~~~~~s~~------------~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~~~~~~~~~~i 60 (343)
.+|.++.|+|+ +++.|++||+.+++.+..+.. |.. .|.+++|+|+ +.++++++.||.|
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADE-NFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTC-CEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCC-cEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 35667777763 368999999998887777664 345 7999999998 7789999888999
Q ss_pred EEEeCCCcccceecccCCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCCceEEEe---cccCCCeEEEEEecCCCEEE
Q psy10867 61 QAWPVNSQEKAQLRLICPGRISSMQASP-DAAYIAV-SIETKLHMWQISSGRLLATA---SSHYQPITIVKWSADSNFIV 135 (343)
Q Consensus 61 ~iw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~ 135 (343)
++||+.+++.+..+..|...|.+++|+| ++++|++ +.|+.|++||+++++.+..+ .+|...|.+++|+|++++|+
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 9999999998888888999999999999 8898887 67999999999999988888 68999999999999999999
Q ss_pred EecCCCeEEEeecCccceeeeeecCCC------CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeE
Q psy10867 136 TGGEDGTICVWQLSRLICKQTVAFGIP------GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTC 209 (343)
Q Consensus 136 s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 209 (343)
+++.||.|++||+++......+..... ...................|...|.+++|+ + .++++++.|+.|
T Consensus 178 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~--~~l~~~~~d~~i 253 (366)
T 3k26_A 178 SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G--DLILSKSCENAI 253 (366)
T ss_dssp EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T--TEEEEECSSSEE
T ss_pred EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C--CEEEEEecCCEE
Confidence 999999999999998755433221000 000000011112334555699999999999 4 689999999999
Q ss_pred EEEecCCCce--------------EEEee-cCCcEEEEEEcCC--CCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867 210 KIFDLCTGED--------------LLSLI-LDTRLTCVAFDGT--EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN 272 (343)
Q Consensus 210 ~~wd~~~~~~--------------~~~~~-~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 272 (343)
++||+++++. +..+. +...+.+++|+|+ +++|++++.||.|++||+......... .
T Consensus 254 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~ 326 (366)
T 3k26_A 254 VCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK-------C 326 (366)
T ss_dssp EEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE-------E
T ss_pred EEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc-------c
Confidence 9999988754 44444 6778999999999 999999999999999999876533211 2
Q ss_pred Cccccc--cCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 273 PDFIGH--EKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 273 ~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
..+.+| ...|++++|+|++++|++++.||.|++||+.
T Consensus 327 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 327 TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 345566 7899999999999999999999999999985
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2e-43 Score=297.05 Aligned_cols=281 Identities=15% Similarity=0.172 Sum_probs=231.9
Q ss_pred eEEEecCCCCeEEEEecCCce------EEEEEecCCCCcceEEEEeCC----c---eEEEEEcCCCeEEEEeCCCccc--
Q psy10867 6 EVAFSYDGSGAISVWEPKGGT------LLMSYKGASVLSPHSMCLLGN----D---YVLGVEKGKPMIQAWPVNSQEK-- 70 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~----~---~~~~~~~~~~~i~iw~~~~~~~-- 70 (343)
.++++++.||.|++||+.+++ .+..+.+|.. .|.+++|+|+ + .++++++.|+.|++|++.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~ 105 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS-GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK 105 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT-CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCC-cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccc
Confidence 456677779999999999887 7889999999 9999999999 9 8999988889999999998886
Q ss_pred ---ceecccC-----CcceEEEEEC----CCCCE-EEE-ecCCeEEEEEccC------CceEE-----Ee-------ccc
Q psy10867 71 ---AQLRLIC-----PGRISSMQAS----PDAAY-IAV-SIETKLHMWQISS------GRLLA-----TA-------SSH 118 (343)
Q Consensus 71 ---~~~~~~~-----~~~v~~~~~s----~~~~~-l~~-~~d~~i~v~~~~~------~~~~~-----~~-------~~~ 118 (343)
...+..| ...|.+++|+ |++++ |++ +.|+.|++||+.+ ++.+. .+ ..|
T Consensus 106 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 106 KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence 6666677 5899999999 99998 876 6899999999998 65554 56 458
Q ss_pred CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc---c---ccceEEEEee
Q psy10867 119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ---H---SLPVTHVTLS 192 (343)
Q Consensus 119 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~ 192 (343)
...|.+++|+|++ ++++++.||.|++||+++.. .+..+.. | ...|.+++|+
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~----------------------~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLR----------------------PLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE----------------------EEEEEECCC---CCCCCEEEEEEC
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc----------------------eeEEEeccccccccCCccceEEEC
Confidence 8999999999999 99999999999999998864 3444455 8 8999999999
Q ss_pred cCCCceEEEEeeCC---CeEEEEecCCCceEEEee--------------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 193 KLGAKSRVASVSHD---RTCKIFDLCTGEDLLSLI--------------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 193 ~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
|++ .+|++++.| +.|++||+++++.+..+. +...+.+++|+|++++|++++.||.|++||+
T Consensus 243 ~~~--~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 243 PQG--SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp SST--TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CCC--CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 998 899999999 999999999999888876 6788999999999999999999999999999
Q ss_pred ecccccccccccC----------CCCCCccccccCcEEEEEEccCC----------CEEEEEeCCCcEEEEecccce
Q psy10867 256 RQVPRTRDHHIQD----------STSNPDFIGHEKQVTSLSCSITG----------ITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 256 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~~~~s~~~----------~~l~s~~~dg~i~iwd~~~~~ 312 (343)
+.......+.... .........|...|++++|+|++ ++|++++.||.|++||+.+|+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8765433321000 00000112238999999999998 799999999999999998764
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.3e-42 Score=317.72 Aligned_cols=274 Identities=15% Similarity=0.163 Sum_probs=249.1
Q ss_pred eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEE
Q psy10867 26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMW 104 (343)
Q Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~ 104 (343)
+..+.+.+|.. .|.+++|+|++.+++++..+|.|++||+.+++.+..+..|..+|.+++|+|++++|++ +.|+.|++|
T Consensus 4 ~~~~~~~~h~~-~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 4 DIKKTFSNRSD-RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp CCEEEEEEECS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ccceeeecCCC-ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 45678899999 9999999999999999998899999999999988888899999999999999999987 678999999
Q ss_pred EccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc
Q psy10867 105 QISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184 (343)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
|+.+++.+..+.+|.+.|.+++|+|++++|++++.||.|++||+.++.. ....+.+|..
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---------------------~~~~~~~~~~ 141 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---------------------LEQTFEGHEH 141 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE---------------------EEEEEECCSS
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce---------------------EEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999987521 4556678999
Q ss_pred ceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcC--CCCEEEEEcCCCcEEEEEeeccc
Q psy10867 185 PVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDG--TEDNIYMGTSEGVIKSFCLRQVP 259 (343)
Q Consensus 185 ~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~ 259 (343)
.|.+++|+| ++ ..+++++.||.|++||+++++....+. +...+.+++|+| ++.++++++.||.|++||+....
T Consensus 142 ~v~~~~~~p~~~--~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 142 FVMCVAFNPKDP--STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp CEEEEEEETTEE--EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred cEEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 999999999 66 799999999999999999888777766 347899999999 99999999999999999987644
Q ss_pred ccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCe
Q psy10867 260 RTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPA 334 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~ 334 (343)
. +..+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+. +...+.+++|+|+++.
T Consensus 220 ~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 220 C-----------VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp E-----------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGG
T ss_pred E-----------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCc
Confidence 3 44567899999999999999999999999999999999999999988 8889999999999984
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=291.37 Aligned_cols=274 Identities=12% Similarity=0.132 Sum_probs=224.4
Q ss_pred CCeEEEEecCCceEEEEEe-cCCCCcceEEEEeCC---ceEEEEEcCCCeEEEEeCCCcc-cceecccCCcceEEEE---
Q psy10867 14 SGAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGN---DYVLGVEKGKPMIQAWPVNSQE-KAQLRLICPGRISSMQ--- 85 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~~~-~~~~~~~~~~~v~~~~--- 85 (343)
||.|++||+.+++...... +|.. .|.+++|+|+ +.++++++.||.|++||+.+++ ....+..|...|.+++
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAK-PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESS-CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred CcEEEEEeCCCCcccceeeecccC-cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 7899999999887765533 6777 9999999998 6888888888999999999888 7777889999999995
Q ss_pred ---ECCCCCEEEE-ecCCeEEEEEccCCc-eEEEecccCC----CeEEEE----EecCCCEEEEecCCCeEEEeecCccc
Q psy10867 86 ---ASPDAAYIAV-SIETKLHMWQISSGR-LLATASSHYQ----PITIVK----WSADSNFIVTGGEDGTICVWQLSRLI 152 (343)
Q Consensus 86 ---~s~~~~~l~~-~~d~~i~v~~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~s~~~dg~i~iwd~~~~~ 152 (343)
|+|++++|++ +.|+.|++||+.+++ .+..+..|.+ .+.+++ |+|+++++++++.||.|++||+++..
T Consensus 122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp GGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred ccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence 5788988887 689999999999886 6777766554 799998 67899999999999999999999864
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec---CCCceEEEEeeCCCeEEEEecCCCceEEEe------
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK---LGAKSRVASVSHDRTCKIFDLCTGEDLLSL------ 223 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------ 223 (343)
. .....|...|.+++|+| ++ .++++++.||.|++||+++++....+
T Consensus 202 ~-----------------------~~~~~~~~~v~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 202 L-----------------------RWETNIKNGVCSLEFDRKDISM--NKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp E-----------------------EEEEECSSCEEEEEESCSSSSC--CEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred e-----------------------eeecCCCCceEEEEcCCCCCCC--CEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 3 23345888999999999 77 79999999999999999887654433
Q ss_pred ecCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccC--------CCCCCccccccCcEEEEEEccCCCEE
Q psy10867 224 ILDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQD--------STSNPDFIGHEKQVTSLSCSITGITL 294 (343)
Q Consensus 224 ~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~l 294 (343)
.+...+.+++|+|+++ ++++++.||.|++||++............ ...+..+.+|...|++++|+|++++|
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 3788899999999998 89999999999999998755432111000 02255677899999999999999999
Q ss_pred E-EEeCCCcEEEEeccccee
Q psy10867 295 L-SSSADETLKIWHTISRQC 313 (343)
Q Consensus 295 ~-s~~~dg~i~iwd~~~~~~ 313 (343)
+ +++.||.|++||+.+.+.
T Consensus 337 ~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 337 CVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEETTSEEEEEEECC---
T ss_pred EEEecCCCcEEEEECCCccc
Confidence 8 899999999999987654
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-42 Score=281.09 Aligned_cols=269 Identities=14% Similarity=0.161 Sum_probs=234.7
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHM 103 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v 103 (343)
.+....+.+|.. .|.+++| |++.++++++.||.|++||+.+++....+..|...|.+++|+|++++|++ +.|+.|++
T Consensus 8 ~~~~~~l~~h~~-~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 8 YQLSATLKGHDQ-DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CEEEEEECCCSS-CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHHhhCCCC-CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 477889999999 9999999 88888888888899999999998888888899999999999999999987 68999999
Q ss_pred EEccCC---ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867 104 WQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS 180 (343)
Q Consensus 104 ~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
|++... +.+..+.+|...|.+++| +++++++++.||.|++||... ....+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~------------------------~~~~~~ 139 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGS------------------------LVYNLQ 139 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTE------------------------EEEEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCc------------------------EEEecc
Confidence 998764 557778899999999999 578999999999999999322 556677
Q ss_pred ccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 181 QHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 181 ~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
.|...+.++++.| ++ .++++++.|+.|++||. .+....+. +...+.+++|+|++. +++++.|+.|++||++.
T Consensus 140 ~~~~~v~~~~~~~~~~--~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 140 AHNASVWDAKVVSFSE--NKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp CCSSCEEEEEEEETTT--TEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred cCCCceeEEEEccCCC--CEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence 8999999999998 66 79999999999999994 44444444 778899999999998 99999999999999987
Q ss_pred ccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867 258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~ 336 (343)
... +..+.+|...|++++|+|++ .|++++.||.|++||+.+++.+..+. |...|.+++|+|+++++
T Consensus 215 ~~~-----------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~- 281 (313)
T 3odt_A 215 GDV-----------LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII- 281 (313)
T ss_dssp CCE-----------EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-
T ss_pred hhh-----------hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-
Confidence 543 45677899999999999999 69999999999999999999999998 88899999999999955
Q ss_pred ecc
Q psy10867 337 DYD 339 (343)
Q Consensus 337 ~~~ 339 (343)
+++
T Consensus 282 ~~~ 284 (313)
T 3odt_A 282 VGS 284 (313)
T ss_dssp EEE
T ss_pred EEe
Confidence 444
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-42 Score=291.95 Aligned_cols=281 Identities=17% Similarity=0.182 Sum_probs=239.6
Q ss_pred EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc------cceecccCCcceEEEEECCC----C---CEE
Q psy10867 27 LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE------KAQLRLICPGRISSMQASPD----A---AYI 93 (343)
Q Consensus 27 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~s~~----~---~~l 93 (343)
....+.+|.. .|.+++|+| .++++++.||.|++|++.+++ ....+..|...|.+++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~-~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSS-CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhc-CeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 4556789999 999999999 677777777999999999887 56667789999999999999 8 888
Q ss_pred EE-ecCCeEEEEEccCCce-----EEEeccc-----CCCeEEEEEe----cCCCE-EEEecCCCeEEEeecCc------c
Q psy10867 94 AV-SIETKLHMWQISSGRL-----LATASSH-----YQPITIVKWS----ADSNF-IVTGGEDGTICVWQLSR------L 151 (343)
Q Consensus 94 ~~-~~d~~i~v~~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~------~ 151 (343)
++ +.|+.|++|++.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+++ .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 86 6899999999999887 8888888 5899999999 99999 99999999999999987 4
Q ss_pred ceeeeeecCCCCCCCCccccccceeeee-------cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVK-------SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI 224 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 224 (343)
..... .+...+ ..|...|.+++|+|++ ++++++.|+.|++||+++++.+..+.
T Consensus 165 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 165 LTLNW-----------------SPTLELQGTVESPMTPSQFATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp TTTCC-----------------CCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred ceeec-----------------cCcceeeeeeccccCCCCCceEEEECCCc---eEEEEeCCCcEEEEECCCCceeEEEe
Confidence 33220 011133 4588999999999986 89999999999999999999888887
Q ss_pred c-------CCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCcccc-------------ccCc
Q psy10867 225 L-------DTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-------------HEKQ 281 (343)
Q Consensus 225 ~-------~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 281 (343)
. ...+.+++|+|++++|++++.| +.|++||++.... +..+.+ |...
T Consensus 225 ~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 225 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER-----------IGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE-----------EEEECBC--------CCBSBSSC
T ss_pred ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc-----------cceeccCcccccccccccccCCc
Confidence 5 7889999999999999999999 9999999987544 333445 8999
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-------c---------------CCceEEEEEccCC-------
Q psy10867 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-------H---------------KGPVLGAFLGLLP------- 332 (343)
Q Consensus 282 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~---------------~~~v~~~~~sp~~------- 332 (343)
|.+++|+|++++|++++.||.|++||+.+++.+..+. | ..+|++++|+|++
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 9999999999999999999999999999999888886 4 7899999999999
Q ss_pred ---CeeeecccC
Q psy10867 333 ---PAIHDYDFT 341 (343)
Q Consensus 333 ---~~l~~~~~~ 341 (343)
++|++++..
T Consensus 374 ~~~~~l~s~~~d 385 (397)
T 1sq9_A 374 DLNESLCCVCLD 385 (397)
T ss_dssp TTSCEEEEEETT
T ss_pred cccceEEEecCC
Confidence 688887643
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-43 Score=304.07 Aligned_cols=279 Identities=9% Similarity=0.016 Sum_probs=212.8
Q ss_pred EEEecCCCCeEEEEecCCceE----EEEEecCCCCcceEEEEeCC------ceEEEEEcCCCeEEEEeCCCcccc-----
Q psy10867 7 VAFSYDGSGAISVWEPKGGTL----LMSYKGASVLSPHSMCLLGN------DYVLGVEKGKPMIQAWPVNSQEKA----- 71 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~i~iw~~~~~~~~----- 71 (343)
++.|++.|++|+|||+.+++. ...+.+|.+ .|.+++|+|+ +.+||+++.||+|++||+.+++..
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~-~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG-EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCC-SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCC-cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 456778899999999987654 245677777 9999999996 578999988899999999876421
Q ss_pred ------eecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCc-eEEEecccCCCeEEE--EEecCC-CEEEEecCCC
Q psy10867 72 ------QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGR-LLATASSHYQPITIV--KWSADS-NFIVTGGEDG 141 (343)
Q Consensus 72 ------~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~s~~~dg 141 (343)
..+.+|...|.+++|++++.+++++.||+|++||++++. +...+.+|.+.|.++ .|+|++ ++|++++.|+
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~ 333 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG 333 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS
T ss_pred eecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC
Confidence 245578899999999987643334789999999998774 455688999999999 567887 8999999999
Q ss_pred eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc--cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867 142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED 219 (343)
Q Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 219 (343)
+|++||+++++... .+.+|. ..|.+++|+|++ ..+++++.|++|++||++++.+
T Consensus 334 tvklWD~~~~~~~~----------------------~~~~~~~~~~v~~v~fsp~~--~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 334 YFYIFNPKDIATTK----------------------TTVSRFRGSNLVPVVYCPQI--YSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEEEECGGGHHHHC----------------------EEEEECSCCSCCCEEEETTT--TEEEEECSSSEEEEEETTCTTC
T ss_pred eEEEEECCCCCccc----------------------ccccccccCcccceEeCCCc--CeEEEeCCCCcEEEEECccccc
Confidence 99999999865432 223343 257899999998 6899999999999999999988
Q ss_pred EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc--------------ccccc-----------------
Q psy10867 220 LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR--------------DHHIQ----------------- 267 (343)
Q Consensus 220 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--------------~~~~~----------------- 267 (343)
+..+. |...|.+++|+|++++|++|+.|++|++||+....... .....
T Consensus 390 ~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~ 469 (524)
T 2j04_B 390 VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPL 469 (524)
T ss_dssp CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-
T ss_pred ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceeccc
Confidence 66655 88899999999999999999999999999965321100 00000
Q ss_pred --CCCCCCccccccCcEEEEEEccCCC---EEEEEeCCCcEEEEeccc
Q psy10867 268 --DSTSNPDFIGHEKQVTSLSCSITGI---TLLSSSADETLKIWHTIS 310 (343)
Q Consensus 268 --~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~~ 310 (343)
.+..+..+.+|...|.+++|+|+++ .+|+|+.||.|+||++.-
T Consensus 470 ~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 470 TVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 1334566788999999999999964 999999999999999853
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-43 Score=297.14 Aligned_cols=280 Identities=17% Similarity=0.230 Sum_probs=236.7
Q ss_pred cceEEEEeCCce-EEEEE----------cCCCeEEEEeCCCcccc--eecccCCcceEEEEECCCCCEEEE-ecCCeEEE
Q psy10867 38 SPHSMCLLGNDY-VLGVE----------KGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASPDAAYIAV-SIETKLHM 103 (343)
Q Consensus 38 ~v~~~~~~~~~~-~~~~~----------~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v 103 (343)
.|.+++|+|++. +++++ +.|+.|++||+.+++.. .....|...|.+++|+|++++|++ +.|+.|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v 93 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL 93 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence 788999999986 88988 77899999999987632 222368899999999999999987 57899999
Q ss_pred EEccC----CceEEEecccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867 104 WQISS----GRLLATASSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178 (343)
Q Consensus 104 ~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (343)
|++.+ .+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+.+........ .......
T Consensus 94 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~~~ 160 (416)
T 2pm9_A 94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY-------------TPLTPGQ 160 (416)
T ss_dssp ECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC-------------CCBCCCC
T ss_pred eecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc-------------ccccccc
Confidence 99987 4578889999999999999998 8999999999999999998864110000 0001223
Q ss_pred ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------CCcEEEEEEcCCC-CEEEEEcCCC--
Q psy10867 179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-------DTRLTCVAFDGTE-DNIYMGTSEG-- 248 (343)
Q Consensus 179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~i~~~~~~~~~-~~l~~~~~d~-- 248 (343)
...|...|.+++|+|++. .++++++.|+.|++||+++++.+..+.. ...+.+++|+|++ .++++++.|+
T Consensus 161 ~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLA-HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp SCCSSCCCCEEEECSSCT-TEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred ccCCCCCeeEEEeCCCCC-cEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 457889999999999933 7999999999999999999998888874 6789999999997 6899999998
Q ss_pred -cEEEEEeecccccccccccCCCCCCccc-cccCcEEEEEEcc-CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867 249 -VIKSFCLRQVPRTRDHHIQDSTSNPDFI-GHEKQVTSLSCSI-TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324 (343)
Q Consensus 249 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~ 324 (343)
.|++||++.... +...+. +|...|++++|+| ++++|++++.||.|++||+.+++.+..+. |...|.
T Consensus 240 ~~i~~~d~~~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~ 309 (416)
T 2pm9_A 240 PSILIWDLRNANT----------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCF 309 (416)
T ss_dssp CCCCEEETTSTTS----------CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCC
T ss_pred ceEEEEeCCCCCC----------CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceE
Confidence 999999987432 144566 8999999999999 99999999999999999999999999998 899999
Q ss_pred EEEEccCC-CeeeecccC
Q psy10867 325 GAFLGLLP-PAIHDYDFT 341 (343)
Q Consensus 325 ~~~~sp~~-~~l~~~~~~ 341 (343)
+++|+|++ ++|++++..
T Consensus 310 ~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 310 KTKFAPEAPDLFACASFD 327 (416)
T ss_dssp CEEECTTCTTEEEECCSS
T ss_pred EEEECCCCCCEEEEEecC
Confidence 99999999 788888754
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4e-42 Score=314.40 Aligned_cols=302 Identities=16% Similarity=0.155 Sum_probs=255.3
Q ss_pred ccceEEEecCC--------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
+|.++.|+|++ +|.|+|||+.+++.+..+.+|.. .|.+++|+|++.++++++.||.|++||+.+++.+..+
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 56667777666 79999999999999999999999 9999999999999999999999999999999988888
Q ss_pred ccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcc
Q psy10867 75 LICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 75 ~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
..|.+.|.+++|+|++++|++ +.|+.|++||+.++ .....+.+|...|.+++|+| +++.|++++.||.|++||+.+.
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 899999999999999998887 67899999999987 66778889999999999999 8899999999999999999876
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec--CCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCc
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK--LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTR 228 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~ 228 (343)
.... .....+...+.+++|+| ++ .++++++.||.|++||+++++.+..+. +...
T Consensus 174 ~~~~---------------------~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 230 (814)
T 3mkq_A 174 TPNF---------------------TLTTGQERGVNYVDYYPLPDK--PYMITASDDLTIKIWDYQTKSCVATLEGHMSN 230 (814)
T ss_dssp SCSE---------------------EEECCCTTCCCEEEECCSTTC--CEEEEECTTSEEEEEETTTTEEEEEEECCSSC
T ss_pred ccee---------------------EEecCCCCCEEEEEEEECCCC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 4322 22234558899999999 66 899999999999999999999888887 7788
Q ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE-EEEEeCCCcEEEEe
Q psy10867 229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT-LLSSSADETLKIWH 307 (343)
Q Consensus 229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd 307 (343)
+.+++|+|+++++++++.||.|++||+.+... ...+..|...+.+++|+|+++. +++++.++.+.+|+
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV-----------EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCSE-----------EEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----------EEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 99999999999999999999999999887543 4456678889999999999873 24444566788888
Q ss_pred ccccee----------eee---------------------------------cc-cCCceEEEEEccCCCeeeecc
Q psy10867 308 TISRQC----------LRT---------------------------------IQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 308 ~~~~~~----------~~~---------------------------------~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+..+.. +.. +. +...+.+++|+|+|++|++++
T Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~ 375 (814)
T 3mkq_A 300 LGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG 375 (814)
T ss_dssp CSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE
T ss_pred cCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec
Confidence 754321 110 01 334578999999999998875
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-43 Score=286.48 Aligned_cols=253 Identities=15% Similarity=0.135 Sum_probs=204.8
Q ss_pred EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECC--CCCEEEE-ecCCeEEEE
Q psy10867 30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASP--DAAYIAV-SIETKLHMW 104 (343)
Q Consensus 30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i~v~ 104 (343)
.+.+|.+ .|++++|+|++.++++++.|++|+|||+.+++ .+..+.+|.+.|.+++|+| ++++|++ +.|++|++|
T Consensus 8 ~~~~H~~-~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHED-MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------C-CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccC-eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 4568998 99999999999999999999999999998764 3456779999999999986 3777776 789999999
Q ss_pred EccCC--ceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867 105 QISSG--RLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS 180 (343)
Q Consensus 105 ~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
|++++ +....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++..... .....+.
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~-------------------~~~~~~~ 147 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW-------------------EVKKINN 147 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE-------------------EECCBTT
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc-------------------ceeeeec
Confidence 99887 456778899999999999997 789999999999999999864211 1234456
Q ss_pred ccccceEEEEeecCCC---------------ceEEEEeeCCCeEEEEecCCCc---eEEEee-cCCcEEEEEEcCCC---
Q psy10867 181 QHSLPVTHVTLSKLGA---------------KSRVASVSHDRTCKIFDLCTGE---DLLSLI-LDTRLTCVAFDGTE--- 238 (343)
Q Consensus 181 ~~~~~v~~~~~~~~~~---------------~~~l~~~~~d~~i~~wd~~~~~---~~~~~~-~~~~i~~~~~~~~~--- 238 (343)
+|...|.+++|+|+.. ..+|++++.|+.|++||++... .+..+. |...|.+++|+|++
T Consensus 148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 227 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLP 227 (316)
T ss_dssp SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCS
T ss_pred cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCC
Confidence 7888999999998731 1589999999999999997652 444444 77889999999986
Q ss_pred -CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 239 -DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 239 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
++|++++.|++|++||+....... .....+..|...|.+++|+|++++||+++.|+.|++|+..
T Consensus 228 ~~~las~s~D~~v~iw~~~~~~~~~-------~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 228 TSTIASCSQDGRVFIWTCDDASSNT-------WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCEEEEEETTCEEEEEECSSTTCCC-------CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CceEEEEcCCCeEEEEEccCccccc-------hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 899999999999999987632110 0022356788999999999999999999999999999975
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-41 Score=276.89 Aligned_cols=269 Identities=17% Similarity=0.232 Sum_probs=230.9
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc---ccceecccCCcceEE
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ---EKAQLRLICPGRISS 83 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~---~~~~~~~~~~~~v~~ 83 (343)
.+++++.||.|++||+.+++....+..|.. .|.+++|+|++.++++++.|+.+++|++... +....+..|...|.+
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 109 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQG-FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCS 109 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEEECSS-CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEE
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEeecCCc-cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEE
Confidence 456666799999999999999999999998 9999999999999999999999999998765 344566789999999
Q ss_pred EEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867 84 MQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 84 ~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
++| ++.++++ +.|+.|++|| .++....+..|...+.+++|.| +++.+++++.||.|++||...
T Consensus 110 ~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~----------- 174 (313)
T 3odt_A 110 LSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK----------- 174 (313)
T ss_dssp EEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-----------
T ss_pred EEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-----------
Confidence 999 4566665 7899999999 6788888899999999999998 999999999999999999543
Q ss_pred CCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED 239 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~ 239 (343)
....+.. |...+.+++|+|++ . +++++.|+.|++||+++++.+..+. +...+.+++|+|++
T Consensus 175 -------------~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 175 -------------VIKTFSGIHNDVVRHLAVVDDG--H-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp -------------EEEEECSSCSSCEEEEEEEETT--E-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-
T ss_pred -------------eEEEEeccCcccEEEEEEcCCC--e-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-
Confidence 3444445 88999999999998 5 9999999999999999999998887 78889999999999
Q ss_pred EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeeccc
Q psy10867 240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH 319 (343)
Q Consensus 240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 319 (343)
.|++++.||.|++||+++... ...+..|...|++++|+|+++ +++++.||.|++||+.+++.+.....
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSL-----------KQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCE-----------EEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC----
T ss_pred CEEEEecCCEEEEEECCCCce-----------eEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 588999999999999887543 445677888999999999998 66799999999999999887766653
Q ss_pred C
Q psy10867 320 K 320 (343)
Q Consensus 320 ~ 320 (343)
.
T Consensus 306 ~ 306 (313)
T 3odt_A 306 K 306 (313)
T ss_dssp -
T ss_pred h
Confidence 3
No 66
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.1e-42 Score=303.79 Aligned_cols=297 Identities=16% Similarity=0.169 Sum_probs=255.3
Q ss_pred ccceEEEecCC-------CCeEEEEecCCc----eEEEEEecCCCCc-ceEEEEeC--CceEEEEEcCCCeEEEEeCCCc
Q psy10867 3 LLNEVAFSYDG-------SGAISVWEPKGG----TLLMSYKGASVLS-PHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQ 68 (343)
Q Consensus 3 ~v~~~~~s~~~-------dg~i~iwd~~~~----~~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~ 68 (343)
.|.++.|++++ ++.|++||+.++ +.+..+.+|.. . |.+++|+| ++.++++++.||.|++||+.++
T Consensus 20 ~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~-~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~ 98 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGS-SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 98 (615)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTT-SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCC-ceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence 46677777777 689999999999 89999999999 8 99999999 9999999999999999999755
Q ss_pred --------ccceecccCCcceEEEEECCCCCEEEEe-cC----CeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EE
Q psy10867 69 --------EKAQLRLICPGRISSMQASPDAAYIAVS-IE----TKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FI 134 (343)
Q Consensus 69 --------~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d----~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 134 (343)
+....+..|...|.+++|+|++++|+++ .+ +.|++|| .++.+..+.+|...|.+++|+|+++ .+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 176 (615)
T 1pgu_A 99 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRS 176 (615)
T ss_dssp GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEE
T ss_pred cccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEE
Confidence 4556666899999999999999999974 44 5788877 6788899999999999999999998 89
Q ss_pred EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc---ceEEEEeecC-CCceEEEEeeCCCeEE
Q psy10867 135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL---PVTHVTLSKL-GAKSRVASVSHDRTCK 210 (343)
Q Consensus 135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~l~~~~~d~~i~ 210 (343)
++++.|+.|++||+.+.+ ....+..|.. .|.+++|+|+ + .++++++.|+.|+
T Consensus 177 ~~~~~d~~v~vwd~~~~~----------------------~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 177 MTVGDDGSVVFYQGPPFK----------------------FSASDRTHHKQGSFVRDVEFSPDSG--EFVITVGSDRKIS 232 (615)
T ss_dssp EEEETTTEEEEEETTTBE----------------------EEEEECSSSCTTCCEEEEEECSTTC--CEEEEEETTCCEE
T ss_pred EEEeCCCcEEEEeCCCcc----------------------eeeeecccCCCCceEEEEEECCCCC--CEEEEEeCCCeEE
Confidence 999999999999998764 4455667888 9999999999 8 8999999999999
Q ss_pred EEecCCCceEEEe-----ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867 211 IFDLCTGEDLLSL-----ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL 285 (343)
Q Consensus 211 ~wd~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 285 (343)
+||+++++.+..+ .+...+.+++|+ ++++|++++.|+.|++||+++......+.. ....+...+.++
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~~~~~~~~~~~~ 304 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTL-------DKQQLGNQQVGV 304 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEEC-------CTTCGGGCEEEE
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcC-------CCCcccCceeEE
Confidence 9999999999998 678899999999 999999999999999999987554332210 001235678888
Q ss_pred EEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867 286 SCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 286 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
.|+ +++++++++.||.|++||+.+++.+..+. |...|.+++| |+ |++++
T Consensus 305 ~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~ 354 (615)
T 1pgu_A 305 VAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGS 354 (615)
T ss_dssp EEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEE
T ss_pred EeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEEC
Confidence 885 88999999999999999999999998888 8889999999 77 55554
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.5e-43 Score=333.20 Aligned_cols=295 Identities=17% Similarity=0.266 Sum_probs=259.3
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc---------------
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--------------- 71 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--------------- 71 (343)
.+++++.+|.|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.|++|++.+....
T Consensus 854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 932 (1249)
T 3sfz_A 854 LAVIALSQYCVELWNIDSRLKVADCRGHLS-WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932 (1249)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred EEEEEeCCCeEEEEEcCCCceeeecCCCcc-ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence 444555589999999999999999999999 9999999999999999998999999997542110
Q ss_pred ----------------------eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEe
Q psy10867 72 ----------------------QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWS 128 (343)
Q Consensus 72 ----------------------~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~ 128 (343)
.....+...+.+++|+|+++++++ +.+|.|++|++.+++....+.+|...|.+++|+
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 1012 (1249)
T 3sfz_A 933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT 1012 (1249)
T ss_dssp TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC
T ss_pred CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC
Confidence 011123457999999999999997 678999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe
Q psy10867 129 ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT 208 (343)
Q Consensus 129 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 208 (343)
|+++++++++.||.|++||+.++.. .....|...|.+++++|++ .+++++.|+.
T Consensus 1013 ~dg~~l~s~~~dg~i~vwd~~~~~~-----------------------~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~ 1066 (1249)
T 3sfz_A 1013 ADGKTLISSSEDSVIQVWNWQTGDY-----------------------VFLQAHQETVKDFRLLQDS---RLLSWSFDGT 1066 (1249)
T ss_dssp SSSSCEEEECSSSBEEEEETTTTEE-----------------------ECCBCCSSCEEEEEECSSS---EEEEEESSSE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCce-----------------------EEEecCCCcEEEEEEcCCC---cEEEEECCCc
Confidence 9999999999999999999998633 2345789999999999976 6889999999
Q ss_pred EEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867 209 CKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC 287 (343)
Q Consensus 209 i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (343)
|++||+.+++....+. +...+.+++|+|+++++++++.|+.|++||+..... +..+.+|...|++++|
T Consensus 1067 v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~-----------~~~l~~h~~~v~~~~~ 1135 (1249)
T 3sfz_A 1067 VKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP-----------LHELKGHNGCVRCSAF 1135 (1249)
T ss_dssp EEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC-----------SBCCCCCSSCEEEEEE
T ss_pred EEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce-----------eeeeccCCCcEEEEEE
Confidence 9999999999988887 788899999999999999999999999999986443 5567889999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEecccceeeeec---------c-cCCceEEEEEccCCCeeeecc
Q psy10867 288 SITGITLLSSSADETLKIWHTISRQCLRTI---------Q-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---------~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+|++++|++++.||.|++||+.+++.+..+ . |.+.|++++|+|++++|++++
T Consensus 1136 s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1136 SLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp CSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 999999999999999999999999888775 3 788999999999999999875
No 68
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.9e-42 Score=285.10 Aligned_cols=278 Identities=10% Similarity=0.063 Sum_probs=235.5
Q ss_pred EecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc
Q psy10867 31 YKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS 107 (343)
Q Consensus 31 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~ 107 (343)
+..|.. +|.+++|+|++.++++++.++.|++||+.+++ ....+..|...|.+++|+|++++|++ +.|+.|++||+.
T Consensus 4 ~~~~~~-~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVE-PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSS-CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCC-CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 455777 99999999999999999888999999999886 66777789999999999999999987 678999999999
Q ss_pred CCceEEE--ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867 108 SGRLLAT--ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185 (343)
Q Consensus 108 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
+++.... +..|...|.+++|+|++++|++++.|+.|++||++....... .......|...
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~------------------~~~~~~~~~~~ 144 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV------------------CKHIKKPIRST 144 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE------------------EEEECTTCCSC
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCccee------------------eeeeecccCCC
Confidence 8875443 467899999999999999999999999999999987643211 22333568899
Q ss_pred eEEEEeecCCCceEEEEeeCCCeEEEEecC------------------CCceEEEee-cCCcEEEEEEcCCCCEEEEEcC
Q psy10867 186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLC------------------TGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTS 246 (343)
Q Consensus 186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~------------------~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~ 246 (343)
|.+++|+|++ .++++++.|+.|++||++ .++.+..+. +...+.+++|+|++++|++++.
T Consensus 145 i~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 222 (372)
T 1k8k_C 145 VLSLDWHPNS--VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 222 (372)
T ss_dssp EEEEEECTTS--SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET
T ss_pred eeEEEEcCCC--CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC
Confidence 9999999998 899999999999999953 667777775 6788999999999999999999
Q ss_pred CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc--cee--e--------
Q psy10867 247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS--RQC--L-------- 314 (343)
Q Consensus 247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--~~~--~-------- 314 (343)
|+.|++||++.... +..+..|...|.+++|+|++++|+++ .|+.|++|++.+ ++. +
T Consensus 223 d~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 290 (372)
T 1k8k_C 223 DSTVCLADADKKMA-----------VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQ 290 (372)
T ss_dssp TTEEEEEEGGGTTE-----------EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred CCEEEEEECCCCce-----------eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcccc
Confidence 99999999987543 44567888999999999999988887 899999999987 421 0
Q ss_pred ----------------------------eec--ccCCceEEEEEc-cCC---CeeeecccC
Q psy10867 315 ----------------------------RTI--QHKGPVLGAFLG-LLP---PAIHDYDFT 341 (343)
Q Consensus 315 ----------------------------~~~--~~~~~v~~~~~s-p~~---~~l~~~~~~ 341 (343)
..+ .|..+|++++|. ++| ++|++++..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~D 351 (372)
T 1k8k_C 291 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD 351 (372)
T ss_dssp ------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETT
T ss_pred chhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCC
Confidence 222 288999999966 666 899998754
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.4e-43 Score=289.91 Aligned_cols=286 Identities=13% Similarity=0.117 Sum_probs=234.2
Q ss_pred EecCCCCcceEEEEeCC-----ceEEEEEcCCCeEEEEeCCCcccceeccc-----CCcceEEEEECCC----CCEEEE-
Q psy10867 31 YKGASVLSPHSMCLLGN-----DYVLGVEKGKPMIQAWPVNSQEKAQLRLI-----CPGRISSMQASPD----AAYIAV- 95 (343)
Q Consensus 31 ~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~s~~----~~~l~~- 95 (343)
..+|.. .|.+++|+|+ ..+++++.+ +.|++|++.+++.+..+.. |...|.+++|+|+ +.+|++
T Consensus 14 ~~~h~~-~v~~i~~~p~~~~~~~~~~~~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 14 KEDHNQ-PLFGVQFNWHSKEGDPLVFATVGS-NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp ECTTCS-CEEEEEECTTCCTTSCEEEEEEET-TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred ecCCCC-ceEEEEEecccCCCCceEEEECCC-CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 447888 9999999983 346666666 7999999998877644432 5678999999998 567776
Q ss_pred ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867 96 SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE 174 (343)
Q Consensus 96 ~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (343)
+.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------------- 154 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF----------------- 154 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE-----------------
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe-----------------
Confidence 6899999999999999999999999999999999 8999999999999999999986533321
Q ss_pred eeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-----------------------------c
Q psy10867 175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-----------------------------L 225 (343)
Q Consensus 175 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----------------------------~ 225 (343)
..+..|...|.+++|+|++ .+|++++.|+.|++||+++++....+. +
T Consensus 155 --~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 155 --GGVEGHRDEVLSADYDLLG--EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp --CSTTSCSSCEEEEEECTTS--SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred --cccccccCceeEEEECCCC--CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 1125799999999999998 899999999999999999876543222 6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC---CCCCccccccCcEEEEEEccC--CCEEEEEeCC
Q psy10867 226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS---TSNPDFIGHEKQVTSLSCSIT--GITLLSSSAD 300 (343)
Q Consensus 226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d 300 (343)
...|.+++|+ ++++++++.|+.|++||+.............. ..+..+..|...|++++|+|+ +++|++++.|
T Consensus 231 ~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d 308 (366)
T 3k26_A 231 RNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308 (366)
T ss_dssp SSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred cceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence 7789999999 77999999999999999987654222111111 124556778899999999999 9999999999
Q ss_pred CcEEEEecccceeee----ecc-c--CCceEEEEEccCCCeeeecccC
Q psy10867 301 ETLKIWHTISRQCLR----TIQ-H--KGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 301 g~i~iwd~~~~~~~~----~~~-~--~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|.|++||+.+++... .+. | ...|++++|+|++++|++++..
T Consensus 309 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 356 (366)
T 3k26_A 309 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDD 356 (366)
T ss_dssp SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCC
Confidence 999999999876443 555 4 7899999999999999998754
No 70
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=274.27 Aligned_cols=275 Identities=21% Similarity=0.368 Sum_probs=234.1
Q ss_pred ceEEEecCC------CCeEEEEecCCceEEEEEe--cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc
Q psy10867 5 NEVAFSYDG------SGAISVWEPKGGTLLMSYK--GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI 76 (343)
Q Consensus 5 ~~~~~s~~~------dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~ 76 (343)
+.+.+|+++ |++|+|||+.++++++.++ +|.. .|.+++|+|+++++++|+.||.|++|++++++.+..+.+
T Consensus 29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~-~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 29 NLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGE-YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTC-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCC-eEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 445565554 8999999999999988776 4566 899999999999999999999999999999999988889
Q ss_pred CCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867 77 CPGRISSMQASPDAAYIAV-SIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK 154 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 154 (343)
|...+.++.+ ++.++++ +.++.+++|+...+ ..+..+.+|...+..+.+.++++++++++.||.|++||+++++..
T Consensus 108 h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 108 HSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred ccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 9988887665 5667776 67899999998876 456778899999999999999999999999999999999876433
Q ss_pred eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE--EEeeCCCeEEEEecCCCceEEEeecCCcEEEE
Q psy10867 155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV--ASVSHDRTCKIFDLCTGEDLLSLILDTRLTCV 232 (343)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l--~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~ 232 (343)
.. .......+...|.++.++|.+. ..+ ++++.++.|++||.+.........+...+..+
T Consensus 186 ~~------------------~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~ 246 (318)
T 4ggc_A 186 WV------------------PLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSI 246 (318)
T ss_dssp SC------------------CSEEECCCCSCEEEEEECTTST-TEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred cc------------------ceeeecccCCceEEEEecCCCC-cEEEEEecCCCCEEEEEecccccccccccceeeeeee
Confidence 21 3445566888999999999875 333 46778999999999999998888899999999
Q ss_pred EEcCCCCEEEEEc--CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 233 AFDGTEDNIYMGT--SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 233 ~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
.|+|+++.+++++ .|+.|++||+++... +..+.+|.+.|++++|+|++++|++|+.||+|+|||+.+
T Consensus 247 ~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~-----------~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 247 LWSPHYKELISGHGFAQNQLVIWKYPTMAK-----------VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEETTTTEEEEEECTTTCCEEEEETTTCCE-----------EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eecccccceEEEEEcCCCEEEEEECCCCcE-----------EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 9999999887754 799999999987543 556889999999999999999999999999999999876
Q ss_pred ce
Q psy10867 311 RQ 312 (343)
Q Consensus 311 ~~ 312 (343)
..
T Consensus 316 ~d 317 (318)
T 4ggc_A 316 LD 317 (318)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-42 Score=313.61 Aligned_cols=324 Identities=10% Similarity=0.045 Sum_probs=238.8
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----------eecc
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA-----------QLRL 75 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----------~~~~ 75 (343)
.+++++.|+.|++||+.+++++..+. |.. .|++++|+|++.++++|+.||.|++||+.+++.. ....
T Consensus 71 ~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~-~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQKVLTTVF-VPG-KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEEEETTCEEEEEETTTCSEEEEEE-CSS-CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EEEEEECcCeEEEEECCCCcEEEEEc-CCC-CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 34455558999999999999999887 455 8999999999999999999999999999987653 2335
Q ss_pred cCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEeccc------------------CCCeEEEEEecCCCEEE
Q psy10867 76 ICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSH------------------YQPITIVKWSADSNFIV 135 (343)
Q Consensus 76 ~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~ 135 (343)
+|.+.|.+++|+|++ ..|++ +.|+.| +||+++++.+..+..| ...|.+++|+|++++|+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 788999999999964 55555 678999 9999999988888765 57799999999999999
Q ss_pred EecCCCeEEEeecCccceeeeeecC-----CC----------CC------------CCC--c-c-cc-cc-----ceeee
Q psy10867 136 TGGEDGTICVWQLSRLICKQTVAFG-----IP----------GS------------SGK--G-V-TG-LT-----EPLHV 178 (343)
Q Consensus 136 s~~~dg~i~iwd~~~~~~~~~~~~~-----~~----------~~------------~~~--~-~-~~-~~-----~~~~~ 178 (343)
+++.||.|++||+++++......+. .+ .. ... . . .+ .. ..+..
T Consensus 228 sgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~ 307 (902)
T 2oaj_A 228 TIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTM 307 (902)
T ss_dssp EEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEE
T ss_pred EEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEE
Confidence 9999999999999887665421110 00 00 000 0 0 00 00 01111
Q ss_pred ec------------------------------ccccceEEEEeecC--------CCceEEEEeeCCCeEEEEecCCCceE
Q psy10867 179 KS------------------------------QHSLPVTHVTLSKL--------GAKSRVASVSHDRTCKIFDLCTGEDL 220 (343)
Q Consensus 179 ~~------------------------------~~~~~v~~~~~~~~--------~~~~~l~~~~~d~~i~~wd~~~~~~~ 220 (343)
+. .+...|..+.+.++ .+...+++++.|+.|++||+.++...
T Consensus 308 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~ 387 (902)
T 2oaj_A 308 IDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFT 387 (902)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEE
T ss_pred EecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcc
Confidence 11 23455667776552 01136888889999999999776533
Q ss_pred EE-------ee-cCCcEE----------------------------------EEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867 221 LS-------LI-LDTRLT----------------------------------CVAFDGTEDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 221 ~~-------~~-~~~~i~----------------------------------~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 258 (343)
.. +. +...|+ +++|+|++++|++|+.|++|++||+...
T Consensus 388 ~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g 467 (902)
T 2oaj_A 388 DKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHG 467 (902)
T ss_dssp CCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCC
T ss_pred cccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCc
Confidence 22 00 123333 4456789999999999999999999875
Q ss_pred cccccccccCCCCCCc--c-----ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce-------------------
Q psy10867 259 PRTRDHHIQDSTSNPD--F-----IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ------------------- 312 (343)
Q Consensus 259 ~~~~~~~~~~~~~~~~--~-----~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~------------------- 312 (343)
...... ... + .+|...|++++|+||+++||+|+.||+|++||+.+++
T Consensus 468 ~~~~~~-------~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 540 (902)
T 2oaj_A 468 DIQDNA-------SFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRR 540 (902)
T ss_dssp TTTTTB-------CEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCS
T ss_pred cccCCc-------eEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeee
Confidence 321100 000 1 2788999999999999999999999999999998762
Q ss_pred --------------------------eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 313 --------------------------CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 313 --------------------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
++..+. |.+.|++++||||| +|++++..
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D 595 (902)
T 2oaj_A 541 FSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAA 595 (902)
T ss_dssp CCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETT
T ss_pred ccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCC
Confidence 356676 99999999999999 99988743
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-43 Score=293.30 Aligned_cols=297 Identities=12% Similarity=0.080 Sum_probs=217.7
Q ss_pred ccceEEEecC--------CCCeEEEEecCCc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---
Q psy10867 3 LLNEVAFSYD--------GSGAISVWEPKGG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE--- 69 (343)
Q Consensus 3 ~v~~~~~s~~--------~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~--- 69 (343)
+|+++.|+++ .||.|++||+.++ +.+..+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK-IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS-CEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc-eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 4555555554 4899999999988 78888999999 99999999999999999988999999999877
Q ss_pred cceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc---eEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867 70 KAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR---LLATASS-HYQPITIVKWSADSNFIVTGGEDGTIC 144 (343)
Q Consensus 70 ~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~ 144 (343)
....+..|...|.+++|+|++++|++ +.|+.|++||+++++ ....+.. |...|.+++|+|++++|++++.|+.|+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 44556689999999999999998887 679999999999886 3667777 999999999999999999999999999
Q ss_pred EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce----E
Q psy10867 145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED----L 220 (343)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~ 220 (343)
+||++........... .........+....+ .|...|.+++|+|++ .+|++++.|+.|++||+++++. +
T Consensus 172 iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEAS----VWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG--NALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp EEEECCSSCC-CCCSC----SSCSCCCEEEEEECC-CCSSSEEEEEECTTS--SCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred EEEEEecccCCCcccc----ccccccchhhhhhcc-cCCceEEEEEECCCC--CEEEEEeCCCcEEEEECCCCCCcceee
Confidence 9999754321110000 000000112344555 899999999999999 7999999999999999999887 5
Q ss_pred EEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc--CC----------------------------
Q psy10867 221 LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ--DS---------------------------- 269 (343)
Q Consensus 221 ~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~---------------------------- 269 (343)
..+. +...+.+++|+|++++|++++.++.+ +|+...........+. ..
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRST 323 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccccc
Confidence 5554 67789999999999999998766655 7766522110000000 00
Q ss_pred -----------CCCCccccccCcEEEEEEccCC-C---EEEEEeCCCcEEEEec
Q psy10867 270 -----------TSNPDFIGHEKQVTSLSCSITG-I---TLLSSSADETLKIWHT 308 (343)
Q Consensus 270 -----------~~~~~~~~~~~~v~~~~~s~~~-~---~l~s~~~dg~i~iwd~ 308 (343)
........|...|+++++.+.. . .|++++.||.|++||+
T Consensus 324 ~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 324 FRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0011123499999999976643 3 6999999999999985
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=293.66 Aligned_cols=278 Identities=11% Similarity=0.089 Sum_probs=220.8
Q ss_pred CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-----------cceecccCC------------cceEEEEECCCC
Q psy10867 34 ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-----------KAQLRLICP------------GRISSMQASPDA 90 (343)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~ 90 (343)
+.+ .|.+++|+|++.++++|+.||.|++|++.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~-~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EAD-IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGG-SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccC-cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 345 99999999999999999999999999998876 355666887 889999999997
Q ss_pred --CEEEE-ecCCeEEEEEccCCceE---------------------------------------EE-ecccCCCeEEEEE
Q psy10867 91 --AYIAV-SIETKLHMWQISSGRLL---------------------------------------AT-ASSHYQPITIVKW 127 (343)
Q Consensus 91 --~~l~~-~~d~~i~v~~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 127 (343)
.+|++ +.|+.|++||+.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 56665 78999999999764432 12 3679999999999
Q ss_pred ecCCCEEEEecCCCeEEEeecCccc-eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867 128 SADSNFIVTGGEDGTICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD 206 (343)
Q Consensus 128 ~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 206 (343)
+|++++|++| .|+.|++||++... ....+.. ....+.+|...|.+++|+|++. .+|++++.|
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~---------------~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~d 248 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDI---------------KPANMEELTEVITAAEFHPNSC-NTFVYSSSK 248 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC---------------CCSSGGGCCCCEEEEEECSSCT-TEEEEEETT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeec---------------ccccccccCcceEEEEECCCCC-cEEEEEeCC
Confidence 9999999998 79999999998432 2221100 0113567999999999999874 589999999
Q ss_pred CeEEEEecCCCce----EEEeec-CC------------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC
Q psy10867 207 RTCKIFDLCTGED----LLSLIL-DT------------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS 269 (343)
Q Consensus 207 ~~i~~wd~~~~~~----~~~~~~-~~------------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 269 (343)
|.|++||+++++. ...+.. .. .|.+++|+|++++|++++. +.|++||++....
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~--------- 318 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR--------- 318 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS---------
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc---------
Confidence 9999999999886 566663 32 8999999999999999998 9999999986221
Q ss_pred CCCCccccccCc---------------EEEEEEccCCCEEEEEeCCCcEEEEecccceeeee------------------
Q psy10867 270 TSNPDFIGHEKQ---------------VTSLSCSITGITLLSSSADETLKIWHTISRQCLRT------------------ 316 (343)
Q Consensus 270 ~~~~~~~~~~~~---------------v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------------ 316 (343)
++..+.+|... +..++|+|++++|++++.||.|++||+.+++.+..
T Consensus 319 -~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (447)
T 3dw8_B 319 -PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKV 397 (447)
T ss_dssp -CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCE
T ss_pred -ccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccc
Confidence 24445555432 33499999999999999999999999998876541
Q ss_pred ---------------cccCCceEEEEEccCCCeeeeccc
Q psy10867 317 ---------------IQHKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 317 ---------------~~~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
+.....|..++|+|++++|++++-
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~ 436 (447)
T 3dw8_B 398 CASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATT 436 (447)
T ss_dssp ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECS
T ss_pred cccCCcccccccccccccCCceeEEEECCCCCEEEEEec
Confidence 123457899999999999998764
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=281.27 Aligned_cols=288 Identities=15% Similarity=0.205 Sum_probs=234.5
Q ss_pred eEEEEecCCceEEEEEecCCCCcceEEEEeCC---ceEEEEEcCCCeEEEEeCCC-cccc-eecccCCcceEEEEECCCC
Q psy10867 16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGN---DYVLGVEKGKPMIQAWPVNS-QEKA-QLRLICPGRISSMQASPDA 90 (343)
Q Consensus 16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~s~~~ 90 (343)
....|+....+.+..+.+|.. .|.+++|+|+ |.++++++.||.|++||+.+ ++.. ..+..|...|.+++|+|++
T Consensus 20 ~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSSPDD-SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG 98 (368)
T ss_dssp ---CCSSCTTCCEECSSCCSS-CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS
T ss_pred EeccCCCCCcceeEeccCCCC-ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC
Confidence 344566667788889999999 9999999999 59999999889999999987 4444 6677899999999999999
Q ss_pred CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEE--ecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867 91 AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKW--SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK 167 (343)
Q Consensus 91 ~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 167 (343)
++|++ +.|+.|++||+.+++.+. +..|...|.+++| +|++++|++++.||.|++||+++++....
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~----------- 166 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV----------- 166 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE-----------
T ss_pred CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE-----------
Confidence 98887 679999999999888765 5579999999999 88999999999999999999998754433
Q ss_pred ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCE----
Q psy10867 168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDN---- 240 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~---- 240 (343)
+..+ ..+.++.+.+ ..+++++.++.+++|+++......... ......++++.++...
T Consensus 167 -----------~~~~-~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T 3mmy_A 167 -----------LQLP-ERCYCADVIY----PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG 230 (368)
T ss_dssp -----------EECS-SCEEEEEEET----TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEE
T ss_pred -----------EecC-CCceEEEecC----CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCe
Confidence 2333 3566666654 468888899999999998776544332 3455666766665544
Q ss_pred EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccC------------cEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK------------QVTSLSCSITGITLLSSSADETLKIWHT 308 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 308 (343)
+++++.||.|++||++....... ...+.+|.. .|++++|+|++++|++++.||.|++||+
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKD--------NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHH--------SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred EEEecCCCcEEEEecCCCCcccc--------ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 99999999999999987532111 233444444 7999999999999999999999999999
Q ss_pred ccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867 309 ISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 309 ~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
.+++++..+. |..+|++++|+|++++|++++-
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 303 DARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred CCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 9999999998 8999999999999999999863
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-42 Score=289.55 Aligned_cols=280 Identities=10% Similarity=0.113 Sum_probs=233.0
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM 84 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~ 84 (343)
...+++++.||.|++||+.+++....+.+|.. .|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...|.++
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 187 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQAHVS-EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDI 187 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETTSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEE
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecccccC-ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEE
Confidence 45677778899999999999999998899999 99999999999999999999999999999999888888999999999
Q ss_pred EECCCCCEEEE-ecCCeEEEEEccCCceEEEecc---cCCCeEEEE---------------------EecCCCEEEEecC
Q psy10867 85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASS---HYQPITIVK---------------------WSADSNFIVTGGE 139 (343)
Q Consensus 85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~---~~~~v~~~~---------------------~~~~~~~l~s~~~ 139 (343)
+|+|++++|++ +.|+.|++||+++++.+..+.. |...+.+++ |+|++++|++++.
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 99999998887 6899999999999998888874 344555555 5688999999999
Q ss_pred CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce
Q psy10867 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED 219 (343)
Q Consensus 140 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 219 (343)
||.|++||++++.... .....|...|.+++|+|+++ .+|++++.||.|++||+++++.
T Consensus 268 dg~i~i~d~~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~-~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTI---------------------QLPSKFTCSCNSLTVDGNNA-NYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TSCEEEEETTTCCEEE---------------------EECCTTSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCTTS
T ss_pred CCeEEEEECCCCceeE---------------------EcccccCCCceeEEEeCCCC-CEEEEEeCCCeEEEEEcCCCcC
Confidence 9999999998865432 23346889999999999982 2999999999999999998754
Q ss_pred -EEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC---E
Q psy10867 220 -LLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI---T 293 (343)
Q Consensus 220 -~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~ 293 (343)
+..+. +...+.++.+ +++++|++++.|+.|++||+........... ......+..|...|.+++|+|+++ .
T Consensus 326 ~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~g~ 402 (420)
T 3vl1_A 326 PVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIE--FETPTFLVSNDDAVSQFCYVSDDESNGE 402 (420)
T ss_dssp CSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEEC--TTSCEEECCSSCCCCEEEEECCSSSSCE
T ss_pred chhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCcccee--ccCccEEccCCcceEEEEEccCCCCcce
Confidence 55554 5667888855 5788999999999999999987544332211 111234567889999999999999 7
Q ss_pred EEEEeCCCcEEEEeccc
Q psy10867 294 LLSSSADETLKIWHTIS 310 (343)
Q Consensus 294 l~s~~~dg~i~iwd~~~ 310 (343)
+++.+.+|.+.+|++++
T Consensus 403 l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 403 VLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEETTTEEEEEESCC
T ss_pred EEEEcCCceEEEEeccC
Confidence 88888899999999864
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-42 Score=294.66 Aligned_cols=283 Identities=15% Similarity=0.115 Sum_probs=219.1
Q ss_pred EEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccc--eecccCCcceEEEEECC-CCCEEEE-ecCCeE
Q psy10867 27 LLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKA--QLRLICPGRISSMQASP-DAAYIAV-SIETKL 101 (343)
Q Consensus 27 ~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i 101 (343)
.......|.. .|++++|+| ++.+||+|+.||.|+|||+.+++.. ..+.+|.+.|++++|+| ++.+|++ +.|++|
T Consensus 111 ~~~~~~~~~~-~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 111 ILQKAAPFDR-RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp SCCEEEECSS-CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred ecccCCCCCC-CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 3445667887 999999999 5678999999999999999877654 33458999999999998 6788886 689999
Q ss_pred EEEEccCCceEEEecc--cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 102 HMWQISSGRLLATASS--HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 102 ~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++||++++........ +...+.+++|+|++++|++|+.||.|++||++.. .+..+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-----------------------~~~~~ 246 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-----------------------ELWNL 246 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-----------------------BCCCS
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-----------------------eeEEE
Confidence 9999987654433333 3446789999999999999999999999999753 44566
Q ss_pred cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe----ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL----ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
.+|...|.+++|+|+++ .++++++.|+.|++||+++.+....+ .|...|.+++|+|++++|++++.||.|++||+
T Consensus 247 ~~h~~~v~~v~~~p~~~-~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCD-WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp BCCSSCEEEEEECTTCS-SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred ecccceEEeeeecCCCc-eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 78999999999999985 58889999999999999887654333 36788999999999999999999999999999
Q ss_pred ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe------------CCCcEEEEecccceeeeecc--cCC
Q psy10867 256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS------------ADETLKIWHTISRQCLRTIQ--HKG 321 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~--~~~ 321 (343)
................ .....+....|+|++.++++++ .++.|++||..+++.+..+. |..
T Consensus 326 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~ 400 (435)
T 4e54_B 326 SQWDCPLGLIPHPHRH-----FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS 400 (435)
T ss_dssp SSSSSEEEECCCCCCC-----CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCC
T ss_pred CCCccceEEecccccc-----cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCC
Confidence 8765433221100000 0001122334555555554443 34679999999999988875 778
Q ss_pred ceEEE-EEccCCCeeeecc
Q psy10867 322 PVLGA-FLGLLPPAIHDYD 339 (343)
Q Consensus 322 ~v~~~-~~sp~~~~l~~~~ 339 (343)
.|.++ +|+|+|++|++++
T Consensus 401 ~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 401 GISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp CCCCEEEECTTSSCEEEEC
T ss_pred cEEEEEEECCCCCEEEEEc
Confidence 88887 6999999999875
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-42 Score=293.01 Aligned_cols=296 Identities=12% Similarity=0.142 Sum_probs=236.7
Q ss_pred EEecCCceEEEEE-ecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCC---cccc--eecccCCcceEEEEECCCCC
Q psy10867 19 VWEPKGGTLLMSY-KGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNS---QEKA--QLRLICPGRISSMQASPDAA 91 (343)
Q Consensus 19 iwd~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~---~~~~--~~~~~~~~~v~~~~~s~~~~ 91 (343)
.|+ .+++.+..+ ++|.. .|++++|+| ++.++++++.||.|++||+.+ +... .....|...|.+++|+|+++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~-~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPN-SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD 124 (437)
T ss_dssp GGG-CCCCEEEEECTTTTS-CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS
T ss_pred ccc-ccceEEeeeccCCCC-ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC
Confidence 588 478889999 88888 999999999 999999999999999999876 3322 12226899999999999999
Q ss_pred EEEE-ecCCeEEEEEcc---CCceEEEecc------------cCCCeEEEE--EecCCCEEEEecCCCeEEEeecCccce
Q psy10867 92 YIAV-SIETKLHMWQIS---SGRLLATASS------------HYQPITIVK--WSADSNFIVTGGEDGTICVWQLSRLIC 153 (343)
Q Consensus 92 ~l~~-~~d~~i~v~~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~ 153 (343)
+|++ +.|+.|++||+. +++....+.. +...+.++. +++++++|++++.||.|++||+++++.
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence 8887 689999999994 5555443332 455677777 557899999999999999999998653
Q ss_pred eeeeecCCCCCCCCccccccceeeeecc--cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cCCcE
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQ--HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LDTRL 229 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~~~i 229 (343)
+..+.. |...|++++|+|++ .+|++++.||.|++||+++++.+..+. +..+|
T Consensus 205 ----------------------~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (437)
T 3gre_A 205 ----------------------LQIIENSPRHGAVSSICIDEEC--CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI 260 (437)
T ss_dssp ----------------------EEEEECCGGGCCEEEEEECTTS--CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred ----------------------eEEEccCCCCCceEEEEECCCC--CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence 344445 88999999999998 899999999999999999999988774 56789
Q ss_pred EEEEEcC----CCCEEEEEcCCCcEEEEEeecccccccccccCCCC-------------CCcccc--ccCcEEEEEEccC
Q psy10867 230 TCVAFDG----TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS-------------NPDFIG--HEKQVTSLSCSIT 290 (343)
Q Consensus 230 ~~~~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~~~~~~--~~~~v~~~~~s~~ 290 (343)
.+++|+| ++.+|++++.|+.|++||+++......+....... ...+.+ |...|++++|+ +
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 9996654 67799999999999999998765433222111000 001233 88899999999 7
Q ss_pred CCEEEEEeCCCcEEEEecccceeeeecc--------------------------------------cCCceEEEEEccC-
Q psy10867 291 GITLLSSSADETLKIWHTISRQCLRTIQ--------------------------------------HKGPVLGAFLGLL- 331 (343)
Q Consensus 291 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------------~~~~v~~~~~sp~- 331 (343)
+++|++++.|+.|++||+.+++.+..+. |.+.|++++|+++
T Consensus 340 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~ 419 (437)
T 3gre_A 340 DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVD 419 (437)
T ss_dssp TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESS
T ss_pred ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccC
Confidence 8999999999999999999887766554 6788999999998
Q ss_pred -CCeeeecccC
Q psy10867 332 -PPAIHDYDFT 341 (343)
Q Consensus 332 -~~~l~~~~~~ 341 (343)
+.+|++++..
T Consensus 420 ~~~~l~s~~~d 430 (437)
T 3gre_A 420 ETPLLVACDNS 430 (437)
T ss_dssp SSEEEEEEETT
T ss_pred CceEEEEEcCC
Confidence 7788888753
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.5e-43 Score=291.49 Aligned_cols=250 Identities=7% Similarity=0.007 Sum_probs=203.4
Q ss_pred EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc--ccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc
Q psy10867 30 SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ--EKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI 106 (343)
Q Consensus 30 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~ 106 (343)
.++.+.. +|.+++|+|++.++++++.|+.|++||+.++ +....+..|...|.+++|+|++++|++ +.|+.|++||+
T Consensus 6 ~~~~~~~-~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPK-PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSS-CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCC-cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 3444566 8999999999999999988899999999987 667778899999999999999998887 67999999999
Q ss_pred cCCc---eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-c
Q psy10867 107 SSGR---LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-H 182 (343)
Q Consensus 107 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 182 (343)
.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++..... ....+.. |
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-------------------~~~~~~~~h 145 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW-------------------VSKHLKRPL 145 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC-------------------CCEEECSSC
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce-------------------eeeEeeccc
Confidence 9887 677788899999999999999999999999999999998864211 2344555 9
Q ss_pred ccceEEEEeecCCCceEEEEeeCCCeEEEEecC------------------CCceEEEeecCCcEEEEEEcCCCCEEEEE
Q psy10867 183 SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC------------------TGEDLLSLILDTRLTCVAFDGTEDNIYMG 244 (343)
Q Consensus 183 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (343)
...|.+++|+|++ .+|++++.|+.|++||++ .++.+..+.|...|.+++|+|++++|+++
T Consensus 146 ~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 223 (377)
T 3dwl_C 146 RSTILSLDWHPNN--VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA 223 (377)
T ss_dssp CSCEEEEEECTTS--SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE
T ss_pred CCCeEEEEEcCCC--CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE
Confidence 9999999999998 899999999999999985 34455555677889999999999999999
Q ss_pred cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 245 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
+.|+.|++||+......... +..+.+|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRA-------LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEE-------CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred eCCCcEEEEECCCCCCccee-------eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999876542111 45678899999999999999999999876655 66654
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-41 Score=279.76 Aligned_cols=285 Identities=10% Similarity=0.039 Sum_probs=230.2
Q ss_pred EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---cceecccCCcceEEEEECCCCC-EEEE-ecCCeEEE
Q psy10867 29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---KAQLRLICPGRISSMQASPDAA-YIAV-SIETKLHM 103 (343)
Q Consensus 29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v 103 (343)
....+|.. .|.+++|+|++.++++++.|+.|++|++.+++ .......|...|.+++|+|+++ +|++ +.|+.|++
T Consensus 5 ~~~~~h~~-~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKD-YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSS-CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCC-cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 33457888 99999999999999998888999999998776 2344458999999999999999 7776 67999999
Q ss_pred EEc-cCCceEEEecc--cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867 104 WQI-SSGRLLATASS--HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS 180 (343)
Q Consensus 104 ~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
||+ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++........ ..+++..+.
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~~~~~ 148 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAV-------------KNLNSNNTK 148 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEE-------------EESCSSSSS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccc-------------cCCeeeEEe
Confidence 999 77765 67788 999999999999 9999999999999999998610000000 001222233
Q ss_pred ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceE---EEeecCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEe
Q psy10867 181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDL---LSLILDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~---~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~ 255 (343)
|...|.+++|+|++ +++++.|+.|++||+++ +... ....+...+.+++|+| +++++++++.||.|++|++
T Consensus 149 -~~~~v~~~~~~~~~----l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR----LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp -SCCCEEEEEECSSE----EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred -eCCceEEEEecCCc----EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 78899999999863 99999999999999998 5532 2233677899999999 9999999999999999999
Q ss_pred ecccccccccccCCCCCCcccccc---------CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c-CCceE
Q psy10867 256 RQVPRTRDHHIQDSTSNPDFIGHE---------KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H-KGPVL 324 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~v~ 324 (343)
+...... .......+..|. ..|++++|+|++++|++++.||.|++||+.+++.+..+. | ..+|.
T Consensus 224 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 298 (342)
T 1yfq_A 224 DDQGDDY-----NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV 298 (342)
T ss_dssp CTTCCST-----TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEE
T ss_pred cCCCccc-----ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCce
Confidence 8751000 001133455554 499999999999999999999999999999999999998 6 99999
Q ss_pred EEEEccCCCeeeecccC
Q psy10867 325 GAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 325 ~~~~sp~~~~l~~~~~~ 341 (343)
+++ |++++|++++..
T Consensus 299 ~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 299 KIA--CSDNILCLATSD 313 (342)
T ss_dssp EEE--ECSSEEEEEEEC
T ss_pred Eec--CCCCeEEEEecC
Confidence 999 999999998753
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.3e-41 Score=283.12 Aligned_cols=266 Identities=13% Similarity=0.108 Sum_probs=215.8
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEe--cCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecc---cCCcc
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYK--GASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRL---ICPGR 80 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---~~~~~ 80 (343)
++++++.||.|++||+.+++....+. +|.. .|.+++|+| ++.++++++.|+.|++||+.+.. ...+. .+...
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGD-AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFAKTDSWDYW 165 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCSTTC-BEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEECCCCSSCC
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCcCC-ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEeccCCCCCC
Confidence 34444448999999999888877776 5888 999999999 67899999888999999999644 33333 34578
Q ss_pred eEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCccceeeeee
Q psy10867 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVA 158 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 158 (343)
|.+++|+|++++|++ +.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+++.....
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--- 241 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN--- 241 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT---
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc---
Confidence 999999999999997 68899999999 5788889999999999999999999 99999999999999998743211
Q ss_pred cCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee-c-----------
Q psy10867 159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-L----------- 225 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~----------- 225 (343)
..+..+ +|...|.+++|+| ++ .+|++++.|+.|++||+++++....+. +
T Consensus 242 ---------------~~~~~~-~~~~~v~~~~~s~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (383)
T 3ei3_B 242 ---------------SYIAEM-PHEKPVNAAYFNPTDS--TKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI 303 (383)
T ss_dssp ---------------CEEEEE-ECSSCEEEEEECTTTS--CEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCC
T ss_pred ---------------ceEEEe-cCCCceEEEEEcCCCC--CEEEEEcCCCcEEEEECCCCccccccccccccccccccce
Confidence 123333 6899999999999 88 899999999999999999887755544 1
Q ss_pred ------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc--ccCcEEEEEEccCCCEEEEE
Q psy10867 226 ------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG--HEKQVTSLSCSITGITLLSS 297 (343)
Q Consensus 226 ------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~ 297 (343)
...+..++|+|++++ +++.|+.|++||+.+... +..+.+ |...+..++|+|++++|+++
T Consensus 304 ~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~-----------~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 304 KATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL-----------VHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE-----------EEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred EEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce-----------eeeecCCCCCceEEEEEEecCccEEEEe
Confidence 133445666777766 777899999999987554 333444 56778888999999999999
Q ss_pred eCCCcEEEEeccc
Q psy10867 298 SADETLKIWHTIS 310 (343)
Q Consensus 298 ~~dg~i~iwd~~~ 310 (343)
+ |+.|++||+++
T Consensus 371 s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 371 M-GFNILIWNRED 382 (383)
T ss_dssp E-TTEEEEEECC-
T ss_pred c-CCcEEEEecCC
Confidence 7 99999999864
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-41 Score=309.60 Aligned_cols=331 Identities=10% Similarity=0.061 Sum_probs=235.2
Q ss_pred eEEEecCCCCeEEEEecCCceEE-----------EEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCccccee
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLL-----------MSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQL 73 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~ 73 (343)
..+++++.||.|++||+.+++.. ..+.+|.. .|.+++|+|+ +.++++++.||.| +||+.+++.+..
T Consensus 111 ~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~-~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~ 188 (902)
T 2oaj_A 111 DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS-PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQS 188 (902)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC-CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC-CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEE
Confidence 44555666899999999988764 23466888 9999999996 4788888888999 999999887765
Q ss_pred cccC------------------CcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEE--ec---c------------
Q psy10867 74 RLIC------------------PGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLAT--AS---S------------ 117 (343)
Q Consensus 74 ~~~~------------------~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~--~~---~------------ 117 (343)
+..| ...|.+++|+|+|++|++ +.|+.|++||+++++++.. +. .
T Consensus 189 ~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~ 268 (902)
T 2oaj_A 189 FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSS 268 (902)
T ss_dssp ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCS
T ss_pred EecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCc
Confidence 5444 577999999999999997 6899999999999987653 21 1
Q ss_pred -cCCCeEEEEEec----CC-CEEEEecCC-----CeEEEeecCc------------------cceeeeeecC--------
Q psy10867 118 -HYQPITIVKWSA----DS-NFIVTGGED-----GTICVWQLSR------------------LICKQTVAFG-------- 160 (343)
Q Consensus 118 -~~~~v~~~~~~~----~~-~~l~s~~~d-----g~i~iwd~~~------------------~~~~~~~~~~-------- 160 (343)
|...|.+++|++ ++ ..+++|+.| ..+.+|++.. ......+...
T Consensus 269 ~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 348 (902)
T 2oaj_A 269 TNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNI 348 (902)
T ss_dssp SCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEE
T ss_pred cccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEE
Confidence 345799999964 33 467777665 3788888421 0111111100
Q ss_pred ---C---C---CCC----------CCcc--c--ccc-----------------------------------------cee
Q psy10867 161 ---I---P---GSS----------GKGV--T--GLT-----------------------------------------EPL 176 (343)
Q Consensus 161 ---~---~---~~~----------~~~~--~--~~~-----------------------------------------~~~ 176 (343)
. + +.. ...+ . ... ...
T Consensus 349 ~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~ 428 (902)
T 2oaj_A 349 LPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKD 428 (902)
T ss_dssp EECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCC
T ss_pred EECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCC
Confidence 0 0 000 0000 0 000 000
Q ss_pred eeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE----EEe--------ecCCcEEEEEEcCCCCEEEEE
Q psy10867 177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL----LSL--------ILDTRLTCVAFDGTEDNIYMG 244 (343)
Q Consensus 177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~--------~~~~~i~~~~~~~~~~~l~~~ 244 (343)
..+.+|...+..++|+|++ ++|++|+.|++|++||+.+++.. ... .|...|.+++|+|++++|++|
T Consensus 429 ~~l~G~~~~v~sv~~spdg--~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsg 506 (902)
T 2oaj_A 429 YLLKGGVRTKRQKLPAEYG--TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVS 506 (902)
T ss_dssp CSCCCSBCCCCCCCCCSEE--EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEE
T ss_pred CcccCCcCCCCcccccccC--cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEE
Confidence 1233445555566677887 89999999999999999887531 111 356789999999999999999
Q ss_pred cCCCcEEEEEeecccccc--------c--cc-----ccC-------------------CCCCCccccccCcEEEEEEccC
Q psy10867 245 TSEGVIKSFCLRQVPRTR--------D--HH-----IQD-------------------STSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 245 ~~d~~i~i~d~~~~~~~~--------~--~~-----~~~-------------------~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
+.||+|++||+....... . .. +.. ..++..+.+|.+.|++++||||
T Consensus 507 s~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd 586 (902)
T 2oaj_A 507 IETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI 586 (902)
T ss_dssp ETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT
T ss_pred ecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCC
Confidence 999999999998753100 0 00 000 0124567789999999999999
Q ss_pred CCEEEEEeCCCcEEEEecccceeee-----ec--ccCCceEEEEEc-----cCC---CeeeecccC
Q psy10867 291 GITLLSSSADETLKIWHTISRQCLR-----TI--QHKGPVLGAFLG-----LLP---PAIHDYDFT 341 (343)
Q Consensus 291 ~~~l~s~~~dg~i~iwd~~~~~~~~-----~~--~~~~~v~~~~~s-----p~~---~~l~~~~~~ 341 (343)
| +||+|+.|++|++||++++..+. .+ .|.+.|++++|+ ||| ++|++++..
T Consensus 587 G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D 651 (902)
T 2oaj_A 587 G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM 651 (902)
T ss_dssp S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT
T ss_pred c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC
Confidence 9 99999999999999998877653 23 377889999999 886 899988753
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-41 Score=280.69 Aligned_cols=257 Identities=14% Similarity=0.180 Sum_probs=217.2
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--CcccceecccCCcceEEEEECCC--CCEEEE-ecCC
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--SQEKAQLRLICPGRISSMQASPD--AAYIAV-SIET 99 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~ 99 (343)
|+++..+.+|.. .|.+++|+|++.++++++.||.|++|++. +.+....+..|...|.+++|+|+ +++|++ +.|+
T Consensus 1 G~~~~~~~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 1 GSMVVIANAHNE-LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ----CCEEECCC-CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCccEEecCCcc-cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 456778999999 99999999999999999988999999998 55666777789999999999987 888887 6899
Q ss_pred eEEEEEccCCc--eEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867 100 KLHMWQISSGR--LLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP 175 (343)
Q Consensus 100 ~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (343)
.|++||+.+++ .+..+..|...|.+++|+|+ +++|++++.||.|++||++..... .
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--------------------~ 139 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--------------------S 139 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC--------------------C
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce--------------------e
Confidence 99999999987 67788889999999999999 999999999999999999876322 3
Q ss_pred eeeecccccceEEEEeec-------------CCCceEEEEeeCCCeEEEEecCCCceE----EEee-cCCcEEEEEEcCC
Q psy10867 176 LHVKSQHSLPVTHVTLSK-------------LGAKSRVASVSHDRTCKIFDLCTGEDL----LSLI-LDTRLTCVAFDGT 237 (343)
Q Consensus 176 ~~~~~~~~~~v~~~~~~~-------------~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~-~~~~i~~~~~~~~ 237 (343)
...+..|...|.+++|+| ++ .++++++.|+.|++||+++++.. ..+. |...|.+++|+|+
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKES--RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTT--CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCC--CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCC
Confidence 345567999999999999 46 79999999999999999877643 3333 6788999999999
Q ss_pred ---CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 238 ---EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 238 ---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
+++|++++.||.|++||++......... ......|...|++++|+|++++|++++.||.|++|++..
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKT------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEE------ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCeEEEEeCCCEEEEEeCCCCCccceee------eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 8999999999999999998754221111 223345888999999999999999999999999999874
No 83
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.3e-41 Score=280.35 Aligned_cols=270 Identities=10% Similarity=0.078 Sum_probs=208.7
Q ss_pred ccceEEEecCCC---------------CeEEEEecCCceE----------EEEEecCCCCcceEEEEeCCceEEEEE---
Q psy10867 3 LLNEVAFSYDGS---------------GAISVWEPKGGTL----------LMSYKGASVLSPHSMCLLGNDYVLGVE--- 54 (343)
Q Consensus 3 ~v~~~~~s~~~d---------------g~i~iwd~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~--- 54 (343)
||.++.|++++. +.|++|++..+.. ...+..|.. .|.+++++++ .++++
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~-~v~s~~~~~~--~~~~g~~~ 92 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDD-SPTAIDASKG--IILVGCNE 92 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSC-CCCEEEEETT--EEEEECCC
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCC-ceEEEEeCCC--EEEEEECC
Confidence 788888888761 2599999865321 234667877 8888887654 33333
Q ss_pred --------cCCCeEEEEeCCCcccc-e--------ecccCCcceEEEEECCCCCEEEE---ecCCeEEEEEccCCceEEE
Q psy10867 55 --------KGKPMIQAWPVNSQEKA-Q--------LRLICPGRISSMQASPDAAYIAV---SIETKLHMWQISSGRLLAT 114 (343)
Q Consensus 55 --------~~~~~i~iw~~~~~~~~-~--------~~~~~~~~v~~~~~s~~~~~l~~---~~d~~i~v~~~~~~~~~~~ 114 (343)
..|+.+++|++...... . ....+...+.+++|+|||+++++ +.|++|+|||+++++++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 34578999987654322 1 11134456899999999998864 2589999999999999888
Q ss_pred ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867 115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194 (343)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (343)
+. |.+.|.+++|+|+++++++++.++ +++|+..++... .......|...|.+++|+|+
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~--------------------~~~~~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCI--------------------ARKTDFDKNWSLSKINFIAD 230 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEE--------------------EEECCCCTTEEEEEEEEEET
T ss_pred eC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcce--------------------eeeecCCCCCCEEEEEEcCC
Confidence 85 778899999999999999998655 566666554322 22334568889999999999
Q ss_pred CCceEEEEeeCCC----eEEEEecCCCceE----EEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccc
Q psy10867 195 GAKSRVASVSHDR----TCKIFDLCTGEDL----LSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH 265 (343)
Q Consensus 195 ~~~~~l~~~~~d~----~i~~wd~~~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 265 (343)
+ .++++++.|+ .+++|++...... ..+. +...|++++|+|+|++|++|+.|+.|+|||+++.+.
T Consensus 231 g--~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~----- 303 (365)
T 4h5i_A 231 D--TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM----- 303 (365)
T ss_dssp T--EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-----
T ss_pred C--CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-----
Confidence 9 8999998887 6889998766542 2222 677899999999999999999999999999987544
Q ss_pred ccCCCCCCc-cccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 266 IQDSTSNPD-FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 266 ~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
+.. +.+|...|++++|+|||++||+||.|++|+|||+..
T Consensus 304 ------~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 304 ------SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ------EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred ------EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 333 468999999999999999999999999999999864
No 84
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.5e-41 Score=285.78 Aligned_cols=286 Identities=19% Similarity=0.284 Sum_probs=226.9
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ 85 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 85 (343)
..+++++.||.|++||+.+++.+..+.+|.. .|.+++| ++.++++|+.||.|++||+.+++.+..+..|...|.+++
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTLECKRILTGHTG-SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp SEEEEEESSSCEEEEESSSCCEEEEECCCSS-CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC-cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 4567888899999999999999999999999 9999998 677888888889999999999998888889999999999
Q ss_pred ECCCCCEEEE-ecCCeEEEEEccCCceE---EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867 86 ASPDAAYIAV-SIETKLHMWQISSGRLL---ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
|++ .++++ +.|+.|++||+.+++.. ..+.+|...|.+++| +++++++|+.||.|++||++++.
T Consensus 221 ~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~--------- 287 (435)
T 1p22_A 221 FNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE--------- 287 (435)
T ss_dssp CCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC---------
T ss_pred EcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc---------
Confidence 974 35554 78999999999988654 677889999999999 78899999999999999999864
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCE
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDN 240 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 240 (343)
.+..+.+|...|.++.++ + .++++++.||.|++||+++++.+..+. |...+.+++| ++++
T Consensus 288 -------------~~~~~~~~~~~v~~~~~~--~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 288 -------------FVRTLNGHKRGIACLQYR--D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKR 348 (435)
T ss_dssp -------------EEEEEECCSSCEEEEEEE--T--TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSE
T ss_pred -------------EEEEEcCCCCcEEEEEeC--C--CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCE
Confidence 455566899999999995 3 689999999999999999999998887 7788999998 7889
Q ss_pred EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK 320 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 320 (343)
|++|+.||.|++||+......... ....++..+.+|...|++++| ++++|++++.||.|++||+.+..........
T Consensus 349 l~sg~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 424 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLVAALDPRAP--AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPPR 424 (435)
T ss_dssp EEEEETTSCEEEEEHHHHTSTTSC--TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------------
T ss_pred EEEEeCCCcEEEEECCCCCCcccc--ccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCCC
Confidence 999999999999999875532211 011135567889999999999 7889999999999999999887766655555
Q ss_pred CceEEEEEcc
Q psy10867 321 GPVLGAFLGL 330 (343)
Q Consensus 321 ~~v~~~~~sp 330 (343)
.+...+.|.+
T Consensus 425 ~~~~~~~~~~ 434 (435)
T 1p22_A 425 SPSRTYTYIS 434 (435)
T ss_dssp ----------
T ss_pred CCccceeeec
Confidence 5666666654
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=282.70 Aligned_cols=297 Identities=10% Similarity=0.052 Sum_probs=242.0
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecc-------------cCCc
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------------ICPG 79 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------------~~~~ 79 (343)
++.+++|++..++....+.+|.. .|.+++|+| ++.++++++.||.|++||+.+++...... .|..
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGG-GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSS-CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred cCcceeeccccCcceeeeeccCC-cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 35678899988888899999999 999999999 99999999988999999999887664432 4899
Q ss_pred ceEEEEECC-CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecC---CCEEEEecCCCeEEEeecCcccee
Q psy10867 80 RISSMQASP-DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSAD---SNFIVTGGEDGTICVWQLSRLICK 154 (343)
Q Consensus 80 ~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~ 154 (343)
.|.+++|+| ++.+|++ +.|+.|++||+.+++....+. +...+.++.|+|. +.++++++.||.|++||++++.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-- 177 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-- 177 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC--
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc--
Confidence 999999999 6777776 679999999999998887776 6788999999984 4499999999999999998764
Q ss_pred eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-eEEEe----------
Q psy10867 155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-DLLSL---------- 223 (343)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~---------- 223 (343)
....+..|...|.+++|+|+++ .++++++.||.|++||+++++ ....+
T Consensus 178 --------------------~~~~~~~~~~~v~~~~~~~~~~-~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 178 --------------------CSHILQGHRQEILAVSWSPRYD-YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp --------------------CCEEECCCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred --------------------eeeeecCCCCcEEEEEECCCCC-cEEEEEcCCCcEEEEECCCCCccccccccccccccee
Confidence 4455668999999999999983 369999999999999998775 33333
Q ss_pred ------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE
Q psy10867 224 ------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS 297 (343)
Q Consensus 224 ------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 297 (343)
.+...|.+++|+|++++|++++.||.|++||+.+......... .........+........+..++++
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYG------KVCNNSKKGLKFTVSCGCSSEFVFV 310 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCC------CCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred eccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccc------cccccccccceeEEecCCCceEEEE
Confidence 3567899999999999999999999999999987654332210 0001111122222223345667777
Q ss_pred eCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 298 SADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 298 ~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
+.|+.|++||+.+++.+..+. |.+.|++++|+|++++|++++..
T Consensus 311 ~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 311 PYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp EETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred ecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 889999999999999999998 99999999999999999998754
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.6e-40 Score=266.74 Aligned_cols=243 Identities=15% Similarity=0.178 Sum_probs=199.5
Q ss_pred eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC--ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEe
Q psy10867 72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG--RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVW 146 (343)
Q Consensus 72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iw 146 (343)
..+.+|.+.|.+++|+|+|++|++ +.|++|++||+.++ +.+..+.+|.++|.+++|+| ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 345689999999999999999997 68999999999753 66788999999999999986 48999999999999999
Q ss_pred ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe-
Q psy10867 147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL- 223 (343)
Q Consensus 147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~- 223 (343)
|++++.. ..+..+..|...|.+++|+|+..+.+|++++.|+.|++||++++.. ...+
T Consensus 83 d~~~~~~--------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 142 (297)
T 2pm7_B 83 KEENGRW--------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID 142 (297)
T ss_dssp EBSSSCB--------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE
T ss_pred EcCCCce--------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee
Confidence 9987531 1344566799999999999972117999999999999999987642 2333
Q ss_pred ecCCcEEEEEEcCC-------------CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867 224 ILDTRLTCVAFDGT-------------EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 224 ~~~~~i~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
.|...+.+++|+|+ +++|++|+.|+.|++||++....... ....+.+|...|.+++|+|+
T Consensus 143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-------~~~~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-------LESTLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-------EEEEECCCSSCEEEEEECCC
T ss_pred cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-------EEEEecCCCCceEEEEECCC
Confidence 37888999999997 57999999999999999986542211 13457789999999999998
Q ss_pred C---CEEEEEeCCCcEEEEecccce---eeeec--c-cCCceEEEEEccCCCeeeecccC
Q psy10867 291 G---ITLLSSSADETLKIWHTISRQ---CLRTI--Q-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 291 ~---~~l~s~~~dg~i~iwd~~~~~---~~~~~--~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
+ ++|++++.|++|++||+.+.. ....+ . +...|.+++|+|++++|++++..
T Consensus 216 ~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 216 VLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred CCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence 5 899999999999999997642 11223 2 77899999999999999998753
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.9e-42 Score=291.05 Aligned_cols=278 Identities=16% Similarity=0.155 Sum_probs=214.8
Q ss_pred ccceEEEec---------CCCCeEEEEecCCceE--EEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCccc
Q psy10867 3 LLNEVAFSY---------DGSGAISVWEPKGGTL--LMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEK 70 (343)
Q Consensus 3 ~v~~~~~s~---------~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~ 70 (343)
.|++++|+| +.||.|+|||+.+++. ...+.+|.. .|++++|+| ++.+|++++.||+|++||++++..
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~-~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGG-SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSC-CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCC-CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 356666655 4489999999987654 455678998 999999998 678888988889999999987654
Q ss_pred ceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEe
Q psy10867 71 AQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVW 146 (343)
Q Consensus 71 ~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw 146 (343)
..... .+...+.+++|+|++++|++ +.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.|+.|++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 43332 33456789999999999997 678999999986 456678889999999999999876 78899999999999
Q ss_pred ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-c
Q psy10867 147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-L 225 (343)
Q Consensus 147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~ 225 (343)
|+++..... ......+|...|++++|+|++ .+|++++.|+.|++||+++++....+. +
T Consensus 279 d~~~~~~~~-------------------~~~~~~~h~~~v~~~~~spdg--~~l~s~~~D~~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 279 DLRQVRGKA-------------------SFLYSLPHRHPVNAACFSPDG--ARLLTTDQKSEIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp ETTTCCSSS-------------------CCSBCCBCSSCEEECCBCTTS--SEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred ecccccccc-------------------eEEEeeeccccccceeECCCC--CeeEEEcCCCEEEEEECCCCccceEEecc
Confidence 998764332 223345799999999999999 899999999999999999988776654 2
Q ss_pred C------CcEEEEEEcCCCCEEEEEc------------CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE-E
Q psy10867 226 D------TRLTCVAFDGTEDNIYMGT------------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL-S 286 (343)
Q Consensus 226 ~------~~i~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~ 286 (343)
. ..+....|+|++..++++. .++.|++||..+...... ...+|...|.++ +
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~----------l~~~~~~~v~s~~~ 407 (435)
T 4e54_B 338 PHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ----------LYDPESSGISSLNE 407 (435)
T ss_dssp CCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE----------ECCSSCCCCCCEEE
T ss_pred cccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE----------EeCCCCCcEEEEEE
Confidence 1 1234566777777776654 235799999887544321 134677888887 6
Q ss_pred EccCCCEEEEEeCCCcEEEEecccceee
Q psy10867 287 CSITGITLLSSSADETLKIWHTISRQCL 314 (343)
Q Consensus 287 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 314 (343)
|+|+|++|++|+ |+.|+|||+++++..
T Consensus 408 fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 408 FNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp ECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred ECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 999999999876 789999999988753
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.5e-40 Score=282.86 Aligned_cols=294 Identities=17% Similarity=0.148 Sum_probs=241.5
Q ss_pred eEEEEEecCCCCc-ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEE
Q psy10867 26 TLLMSYKGASVLS-PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMW 104 (343)
Q Consensus 26 ~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~ 104 (343)
.....+.+|.. . +.++.++ +.++++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++.+++++.|+.|++|
T Consensus 112 ~~~~~l~~h~~-~v~~~~~~~--~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 112 PQRTTLRGHMT-SVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVW 188 (464)
T ss_dssp CEEEEEECCSS-SCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEE
T ss_pred cceEEEcCCCC-CcEEEEEEC--CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEE
Confidence 45678899987 5 4666664 568888888899999999999998888899999999999998844445889999999
Q ss_pred EccCCceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeeeecCCCCC-CCCccccccceeeeecc
Q psy10867 105 QISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS-SGKGVTGLTEPLHVKSQ 181 (343)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 181 (343)
|+++++.+..+.+|.+.|.+++|++ +++++++++.||.|++||+++.............. ..............+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 9999999999999999999999984 77899999999999999998865433221100000 00000111123567788
Q ss_pred cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867 182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR 260 (343)
Q Consensus 182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 260 (343)
|...+.++ ++++ .++++++.|+.|++||+++++.+..+. +...+.+++|+|+++++++|+.||.|++||+++...
T Consensus 269 ~~~~v~~~--~~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 269 HMASVRTV--SGHG--NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 344 (464)
T ss_dssp CSSCEEEE--EEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccceEEEE--cCCC--CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 98888887 5666 799999999999999999999988887 788899999999999999999999999999987543
Q ss_pred cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+..+.+|...|.+++|+ +++|++++.||.|++||+.+++....+.+...+..++|+|++++|++++
T Consensus 345 -----------~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 345 -----------MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp -----------EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred -----------EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 45677899999999997 5799999999999999999988877777888899999999999999886
No 89
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3e-41 Score=279.63 Aligned_cols=270 Identities=13% Similarity=0.096 Sum_probs=209.1
Q ss_pred CcceEEEEeCCceEEEEEcCC-------CeEEEEeCCCcccc----------eecccCCcceEEEEECCCCCEEEEe---
Q psy10867 37 LSPHSMCLLGNDYVLGVEKGK-------PMIQAWPVNSQEKA----------QLRLICPGRISSMQASPDAAYIAVS--- 96 (343)
Q Consensus 37 ~~v~~~~~~~~~~~~~~~~~~-------~~i~iw~~~~~~~~----------~~~~~~~~~v~~~~~s~~~~~l~~~--- 96 (343)
++|++++|+||+++|++|+.+ +.|++|++...... ..+..|...|.+++++ +..++++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 489999999999999998653 25999998765432 1244677788888765 4455542
Q ss_pred ---------cCCeEEEEEccCCceEE----Ee-----cccCCCeEEEEEecCCCEEEE--ecCCCeEEEeecCccceeee
Q psy10867 97 ---------IETKLHMWQISSGRLLA----TA-----SSHYQPITIVKWSADSNFIVT--GGEDGTICVWQLSRLICKQT 156 (343)
Q Consensus 97 ---------~d~~i~v~~~~~~~~~~----~~-----~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~ 156 (343)
.|+.+++|++.+..... .. ..+...+.+++|+|||+++++ ++.|+.|++||+.++.....
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 36789999987653221 11 124456899999999998764 55789999999998754332
Q ss_pred eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEE
Q psy10867 157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVA 233 (343)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~ 233 (343)
+ .|...|.+++|+|++ +++++++.+ .+++|+..+++.+.... +...+.+++
T Consensus 173 ----------------------~-~~~~~V~~v~fspdg--~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 173 ----------------------I-ETRGEVKDLHFSTDG--KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp ----------------------E-ECSSCCCEEEECTTS--SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred ----------------------e-CCCCceEEEEEccCC--ceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 2 377889999999999 789888855 56666667776654432 566799999
Q ss_pred EcCCCCEEEEEcCCC----cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 234 FDGTEDNIYMGTSEG----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 234 ~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
|+|+++++++++.++ .+++|++......... ...+.+|...|++++|+|||++||+|+.|++|+|||++
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLR-------SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEE-------EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceeccee-------eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC
Confidence 999999999998877 6888888764322111 33567889999999999999999999999999999999
Q ss_pred cceeeeec-c-cCCceEEEEEccCCCeeeecccC
Q psy10867 310 SRQCLRTI-Q-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 310 ~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
+++++.++ . |..+|++++|+|||++|++++..
T Consensus 300 ~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 300 DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence 99999885 5 99999999999999999999864
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-42 Score=292.95 Aligned_cols=246 Identities=17% Similarity=0.153 Sum_probs=195.6
Q ss_pred EEEEecCCCCcceEEEEeCCc---------eEEEEE-------------------cCCCeEEEEeCCCcccc----eecc
Q psy10867 28 LMSYKGASVLSPHSMCLLGND---------YVLGVE-------------------KGKPMIQAWPVNSQEKA----QLRL 75 (343)
Q Consensus 28 ~~~~~~~~~~~v~~~~~~~~~---------~~~~~~-------------------~~~~~i~iw~~~~~~~~----~~~~ 75 (343)
...+. +.+ .|.+++|+|++ .++|++ +.|++|+||++.+++.. ..+.
T Consensus 127 ~~~~~-~~~-~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~ 204 (524)
T 2j04_B 127 GFIYN-VGG-LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV 204 (524)
T ss_dssp EEEEE-CCC---CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE
T ss_pred eEEEE-CCC-ceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE
Confidence 33444 345 88888888875 566653 46689999999877643 2344
Q ss_pred cCCcceEEEEECCC------CCEEEE-ecCCeEEEEEccCCce-----------EEEecccCCCeEEEEEecCCCEEEEe
Q psy10867 76 ICPGRISSMQASPD------AAYIAV-SIETKLHMWQISSGRL-----------LATASSHYQPITIVKWSADSNFIVTG 137 (343)
Q Consensus 76 ~~~~~v~~~~~s~~------~~~l~~-~~d~~i~v~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~s~ 137 (343)
.|.+.|.+++|+|+ +.+||+ +.|++|++||+.++.. ...+.+|...|.+++|+++ ..|++|
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasg 283 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCG 283 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEE
Confidence 67789999999997 568886 7899999999987632 2367789999999999986 489999
Q ss_pred cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE--EeecCCCceEEEEeeCCCeEEEEecC
Q psy10867 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV--TLSKLGAKSRVASVSHDRTCKIFDLC 215 (343)
Q Consensus 138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~l~~~~~d~~i~~wd~~ 215 (343)
+.||+|++||++++.. +...+.+|...|.++ +|+|+++ .+|++++.|++|++||++
T Consensus 284 s~DgtV~lWD~~~~~~---------------------~~~~~~~H~~~V~sv~~~~s~~g~-~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEV---------------------PSFYDQVHDSYILSVSTAYSDFED-TVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp ETTSEEEEEETTBCSS---------------------CSEEEECSSSCEEEEEEECCTTSC-CEEEEEETTSEEEEECGG
T ss_pred eCCCEEEEEECCCCCC---------------------ceEEeecccccEEEEEEEcCCCCC-eEEEEeccCCeEEEEECC
Confidence 9999999999986421 344567899999999 5677642 589999999999999999
Q ss_pred CCceEEEee-cC--CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867 216 TGEDLLSLI-LD--TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI 292 (343)
Q Consensus 216 ~~~~~~~~~-~~--~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 292 (343)
+++....+. +. ..+.+++|+|+++.+++++.|+.|++||++.... +..+.+|.+.|++++|+|+++
T Consensus 342 ~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~-----------~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 342 DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA-----------VHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC-----------CEEEEECSSCEEEEECCSSCC
T ss_pred CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc-----------ceeeecCCCceEEEEeCCCCC
Confidence 988765554 32 3478999999999999999999999999987432 445778999999999999999
Q ss_pred EEEEEeCCCcEEEEecc
Q psy10867 293 TLLSSSADETLKIWHTI 309 (343)
Q Consensus 293 ~l~s~~~dg~i~iwd~~ 309 (343)
+|++|+.||+|++||+.
T Consensus 411 ~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 411 MVLAGSADGSLIITNAA 427 (524)
T ss_dssp BCEEEETTTEEECCBSC
T ss_pred eEEEEECCCEEEEEech
Confidence 99999999999999853
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.1e-41 Score=281.79 Aligned_cols=271 Identities=16% Similarity=0.205 Sum_probs=225.5
Q ss_pred eEEEecCCCCeEEEEecCCc-e---EEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCc-------cccee
Q psy10867 6 EVAFSYDGSGAISVWEPKGG-T---LLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQ-------EKAQL 73 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~-~---~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~-------~~~~~ 73 (343)
.++++++++|.|+||++... + .+..+.+|.. .|.+++|+| ++.++++++.||.|++|++.++ +.+..
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~ 126 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTA-PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT 126 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSS-CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE
T ss_pred EEEEEEcCCCEEEEEECccCCCCCCCCceEecCCC-CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEE
Confidence 34556788999999998654 2 3456788999 999999999 8999999999999999999987 45667
Q ss_pred cccCCcceEEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEe--cccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867 74 RLICPGRISSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATA--SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS 149 (343)
Q Consensus 74 ~~~~~~~v~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 149 (343)
+.+|...|.+++|+|++ .+|++ +.|+.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||++
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 77899999999999998 57776 68999999999999999998 7899999999999999999999999999999999
Q ss_pred ccceeeeeecCCCCCCCCccccccceeeee-cccccc-eEEEEeecCCCceEEEEe---eCCCeEEEEecCCCce---EE
Q psy10867 150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLP-VTHVTLSKLGAKSRVASV---SHDRTCKIFDLCTGED---LL 221 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~---~~ 221 (343)
++.. +..+ ..|... +.++.|+|++ .+++++ +.|+.|++||+++++. ..
T Consensus 207 ~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 207 KGTV----------------------VAEKDRPHEGTRPVHAVFVSEG--KILTTGFSRMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp TTEE----------------------EEEEECSSCSSSCCEEEECSTT--EEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred CCce----------------------eeeeccCCCCCcceEEEEcCCC--cEEEEeccCCCCceEEEEcCccccCCceEE
Confidence 8653 3333 467665 8999999998 889998 7999999999998765 33
Q ss_pred EeecCCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecccccccccccCCCCCCcccc--ccCcEEEEEEccCCCEEEEEe
Q psy10867 222 SLILDTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG--HEKQVTSLSCSITGITLLSSS 298 (343)
Q Consensus 222 ~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~ 298 (343)
.+.+...+.+++|+|++++|++ |+.|+.|++||+...... +..+.. |...|.+++|+|++.++++
T Consensus 263 ~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~----------~~~l~~~~~~~~v~~~~~sp~~~~~~s-- 330 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF----------LHYLSMFSSKESQRGMGYMPKRGLEVN-- 330 (402)
T ss_dssp ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC----------EEEEEEECCSSCCSEEEECCGGGSCGG--
T ss_pred eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc----------eEeecccccCCcccceEEeccccccee--
Confidence 3346778999999999999975 557999999999875421 112222 5689999999999998775
Q ss_pred CCCcEEEEeccccee
Q psy10867 299 ADETLKIWHTISRQC 313 (343)
Q Consensus 299 ~dg~i~iwd~~~~~~ 313 (343)
.++.+++|++.++++
T Consensus 331 ~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 331 KCEIARFYKLHERKC 345 (402)
T ss_dssp GTEEEEEEEEETTEE
T ss_pred cceeEEEEEcCCCcE
Confidence 466999999987654
No 92
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.8e-40 Score=270.42 Aligned_cols=278 Identities=12% Similarity=0.119 Sum_probs=221.4
Q ss_pred EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc----cceecccCCcceEEEEECC--CCCEEEE-ecCCeE
Q psy10867 29 MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE----KAQLRLICPGRISSMQASP--DAAYIAV-SIETKL 101 (343)
Q Consensus 29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~s~--~~~~l~~-~~d~~i 101 (343)
..+.+|.. .|++++|+|++.++++++.||.|++||+.++. ....+..|...|.+++|+| ++++|++ +.|+.|
T Consensus 5 ~~~~gH~~-~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDD-LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCccccc-ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 34678998 99999999999999999999999999998763 4455668999999999999 5888887 689999
Q ss_pred EEEEccCC---------ceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccc
Q psy10867 102 HMWQISSG---------RLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170 (343)
Q Consensus 102 ~v~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
++||+.++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++......+.....
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-------- 155 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE-------- 155 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE--------
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc--------
Confidence 99999887 557788899999999999999 99999999999999999988765443221000
Q ss_pred cccceeeeecccccceEEEEeecC---CCceEEEEeeCCCeEEEEecCCCce--EEEee-cCCcEEEEEEcCCC----CE
Q psy10867 171 GLTEPLHVKSQHSLPVTHVTLSKL---GAKSRVASVSHDRTCKIFDLCTGED--LLSLI-LDTRLTCVAFDGTE----DN 240 (343)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~-~~~~i~~~~~~~~~----~~ 240 (343)
..........|...+.+++|+|+ + .++++++.++.+.+|+...++. +..+. |...|.+++|+|++ ++
T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 156 -MKVLSIPPANHLQSDFCLSWCPSRFSP--EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp -EESCSCCCSSCSCCCEEEEECCCSSSC--CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred -ccccccccCCcccceeEEEeccCCCCC--cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 00001112357889999999997 6 7999999999998888877765 44444 67889999999998 89
Q ss_pred EEEEcCCCcEEEEEeeccccccccc-----------------------------------ccCCCCCCccccccCcEEEE
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHH-----------------------------------IQDSTSNPDFIGHEKQVTSL 285 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~v~~~ 285 (343)
|++++.||.|++||++......... ......+..+.+|...|+++
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 312 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV 312 (351)
T ss_dssp EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE
Confidence 9999999999999998753211100 00012345567899999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 286 SCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 286 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
+|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 999999999999999999999999886655543
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.8e-40 Score=275.60 Aligned_cols=265 Identities=18% Similarity=0.197 Sum_probs=223.5
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEe
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATA 115 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~ 115 (343)
.+.+++|++ +.+++++.+ +.|++|++.+++....... |...|.+++|+|++++|++ +.||.|++||+.+++.+..+
T Consensus 95 ~~~~~~~s~-~~l~~~~~d-~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 95 YLNLLDWSN-LNVVAVALE-RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 172 (401)
T ss_dssp TCBCEEECT-TSEEEEEET-TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred eEEEEeecC-CCEEEEECC-CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe
Confidence 455677776 345555555 9999999999987765554 7889999999999999997 57999999999999999999
Q ss_pred cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867 116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG 195 (343)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 195 (343)
.+|...|.+++| +++.+++++.||.|++||++... .....+.+|...|.+++|+|++
T Consensus 173 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~---------------------~~~~~~~~~~~~v~~~~~~~~~ 229 (401)
T 4aez_A 173 AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN---------------------HQIGTLQGHSSEVCGLAWRSDG 229 (401)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS---------------------CEEEEEECCSSCEEEEEECTTS
T ss_pred cCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc---------------------ceeeEEcCCCCCeeEEEEcCCC
Confidence 999999999999 46799999999999999998532 2556677899999999999998
Q ss_pred CceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCC-EEEEEc--CCCcEEEEEeecccccccccccCCCC
Q psy10867 196 AKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTED-NIYMGT--SEGVIKSFCLRQVPRTRDHHIQDSTS 271 (343)
Q Consensus 196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~ 271 (343)
.+|++++.|+.|++||+++++....+. +...+.+++|+|++. ++++++ .|+.|++||+.+....
T Consensus 230 --~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~---------- 297 (401)
T 4aez_A 230 --LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV---------- 297 (401)
T ss_dssp --SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE----------
T ss_pred --CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE----------
Confidence 899999999999999999999888776 788899999999775 555554 7999999999875432
Q ss_pred CCccccccCcEEEEEEccCCCEEEEE--eCCCcEEEEecccceeeee--cc-cCCceEEEEEccCCCeeeecccC
Q psy10867 272 NPDFIGHEKQVTSLSCSITGITLLSS--SADETLKIWHTISRQCLRT--IQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 272 ~~~~~~~~~~v~~~~~s~~~~~l~s~--~~dg~i~iwd~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
..+ .+...|.+++|+|++++++++ +.||.|++||+.+++.... +. |...|.+++|+|++++|++++..
T Consensus 298 -~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 298 -NTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp -EEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT
T ss_pred -EEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC
Confidence 223 356789999999999999984 4899999999998765554 44 88999999999999999998753
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=281.34 Aligned_cols=283 Identities=12% Similarity=0.222 Sum_probs=217.2
Q ss_pred ccceEEEecCC--------CCeEEEEecCCce-----------EEEEEecCC------------CCcceEEEEeCCc--e
Q psy10867 3 LLNEVAFSYDG--------SGAISVWEPKGGT-----------LLMSYKGAS------------VLSPHSMCLLGND--Y 49 (343)
Q Consensus 3 ~v~~~~~s~~~--------dg~i~iwd~~~~~-----------~~~~~~~~~------------~~~v~~~~~~~~~--~ 49 (343)
+|.++.|++++ ||.|+|||+.+++ ....+.+|. . .|.+++|+|++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~-~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEE-KINKIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECC-CCCEEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccC-ceEEEEEcCCCCcc
Confidence 45666666655 8999999998877 588899997 7 89999999997 6
Q ss_pred EEEEEcCCCeEEEEeCCCcccc----------------------------------------eecccCCcceEEEEECCC
Q psy10867 50 VLGVEKGKPMIQAWPVNSQEKA----------------------------------------QLRLICPGRISSMQASPD 89 (343)
Q Consensus 50 ~~~~~~~~~~i~iw~~~~~~~~----------------------------------------~~~~~~~~~v~~~~~s~~ 89 (343)
++++++.|+.|++|++.+++.. ....+|...|.+++|+|+
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 7777778899999998765431 113579999999999999
Q ss_pred CCEEEEecCCeEEEEEccC-CceEE-------EecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867 90 AAYIAVSIETKLHMWQISS-GRLLA-------TASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 90 ~~~l~~~~d~~i~v~~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 160 (343)
+++|+++.|+.|++||+.+ ++.+. .+.+|...|.+++|+|++ ++|++|+.||.|++||++++....
T Consensus 189 ~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~----- 263 (447)
T 3dw8_B 189 YETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD----- 263 (447)
T ss_dssp SSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC-----
T ss_pred CCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc-----
Confidence 9999988899999999984 44444 356899999999999998 999999999999999999875311
Q ss_pred CCCCCCCccccccceeeeecccc------------cceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEeecCC
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHS------------LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLILDT 227 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~ 227 (343)
.....+..|. ..|.+++|+|++ .+|++++. +.|++||+++ ++.+..+....
T Consensus 264 -------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 264 -------------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG--RYMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp -------------TTCEEECCC-----CCHHHHHTTCEEEEEECTTS--SEEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred -------------ceeeEeccCCCccccccccccCceEEEEEECCCC--CEEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 0123344444 499999999999 79999998 9999999997 77777776433
Q ss_pred c----------------EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC-CC--------------------
Q psy10867 228 R----------------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD-ST-------------------- 270 (343)
Q Consensus 228 ~----------------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~-------------------- 270 (343)
. +..++|+|++++|++|+.||.|++||+.+........... ..
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDE 407 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTC
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccc
Confidence 3 3349999999999999999999999998754321000000 00
Q ss_pred CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867 271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT 308 (343)
Q Consensus 271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 308 (343)
.......+...|..++|+|++++||+++.++ +++|..
T Consensus 408 ~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 408 ISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 0000113456789999999999999998875 788864
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-40 Score=283.25 Aligned_cols=278 Identities=15% Similarity=0.228 Sum_probs=215.8
Q ss_pred ccceEEEec---------CCCCeEEEEecCC---ce---EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC-
Q psy10867 3 LLNEVAFSY---------DGSGAISVWEPKG---GT---LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN- 66 (343)
Q Consensus 3 ~v~~~~~s~---------~~dg~i~iwd~~~---~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~- 66 (343)
+|+++.|++ +.||.|+|||+.+ +. ....+ .|.. .|.+++|+|++.++++++.||.|++||++
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSS-TVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSS-CEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 455555555 4489999999876 43 22333 4777 99999999999999999999999999995
Q ss_pred --Ccccceecc----------c--CCcceEEEE--ECCCCCEEEE-ecCCeEEEEEccCCceEEEecc--cCCCeEEEEE
Q psy10867 67 --SQEKAQLRL----------I--CPGRISSMQ--ASPDAAYIAV-SIETKLHMWQISSGRLLATASS--HYQPITIVKW 127 (343)
Q Consensus 67 --~~~~~~~~~----------~--~~~~v~~~~--~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~--~~~~v~~~~~ 127 (343)
+++...... . +...+.++. +++++.+|++ +.|+.|++||+++++.+..+.. |.+.|.+++|
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~ 222 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICI 222 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEE
Confidence 443332221 1 455667776 5678888887 6889999999999999999988 8999999999
Q ss_pred ecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeec----CCCceEEEE
Q psy10867 128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSK----LGAKSRVAS 202 (343)
Q Consensus 128 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~~~l~~ 202 (343)
+|++++|++|+.||.|++||++++... ..+. .|...|.+++++| ++ .++++
T Consensus 223 s~~~~~l~s~~~dg~i~iwd~~~~~~~----------------------~~~~~~~~~~v~~~~~~~~~s~~~--~~l~s 278 (437)
T 3gre_A 223 DEECCVLILGTTRGIIDIWDIRFNVLI----------------------RSWSFGDHAPITHVEVCQFYGKNS--VIVVG 278 (437)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEE----------------------EEEBCTTCEEEEEEEECTTTCTTE--EEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCccEE----------------------EEEecCCCCceEEEEeccccCCCc--cEEEE
Confidence 999999999999999999999986533 3332 5778999997665 45 79999
Q ss_pred eeCCCeEEEEecCCCceEEEee---------------------------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 203 VSHDRTCKIFDLCTGEDLLSLI---------------------------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 203 ~~~d~~i~~wd~~~~~~~~~~~---------------------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
++.|+.|++||+++++.+..+. +...|.+++|+ ++++|++|+.|+.|++||+
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 9999999999999998877776 33458889999 7799999999999999999
Q ss_pred ecccccccccc--------------------------cCCCCCCccccccCcEEEEEEccC--CCEEEEEeCCCcEEEEe
Q psy10867 256 RQVPRTRDHHI--------------------------QDSTSNPDFIGHEKQVTSLSCSIT--GITLLSSSADETLKIWH 307 (343)
Q Consensus 256 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd 307 (343)
.+......+.. ...........|...|++++|+++ +.+|++|+.||.|++|+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 358 NELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp TCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred CCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 87665443321 011112233459999999999998 77999999999999995
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.1e-40 Score=276.10 Aligned_cols=269 Identities=14% Similarity=0.164 Sum_probs=222.7
Q ss_pred cceEEEEeCCceE-EEEEcCCCeEEEEeCCCcc----cceecccCCcceEEEEECC-CCCEEEE-ecCCeEEEEEccCC-
Q psy10867 38 SPHSMCLLGNDYV-LGVEKGKPMIQAWPVNSQE----KAQLRLICPGRISSMQASP-DAAYIAV-SIETKLHMWQISSG- 109 (343)
Q Consensus 38 ~v~~~~~~~~~~~-~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~s~-~~~~l~~-~~d~~i~v~~~~~~- 109 (343)
....++++|+... +++++.+|.|++|++.... ....+.+|.+.|.+++|+| ++++|++ +.|+.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 4567888988754 4456777999999986542 2345668999999999999 8899987 67999999999987
Q ss_pred ------ceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--c
Q psy10867 110 ------RLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--S 180 (343)
Q Consensus 110 ------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 180 (343)
+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++ ....+ .
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----------------------~~~~~~~~ 173 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----------------------AVLTLGPD 173 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----------------------EEEEECTT
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----------------------ccEEEecC
Confidence 5678888999999999999998 699999999999999999864 34444 6
Q ss_pred ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-e-cCCc-EEEEEEcCCCCEEEEE---cCCCcEEEEE
Q psy10867 181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-I-LDTR-LTCVAFDGTEDNIYMG---TSEGVIKSFC 254 (343)
Q Consensus 181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~-~~~~-i~~~~~~~~~~~l~~~---~~d~~i~i~d 254 (343)
.|...|.+++|+|++ .+|++++.|+.|++||+++++.+..+ . +... +.+++|+|++++|++| +.|+.|++||
T Consensus 174 ~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDG--ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp TCCSCEEEEEECTTS--SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCceEEEEECCCC--CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 799999999999998 89999999999999999999998887 3 4444 8999999999999999 7999999999
Q ss_pred eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEeccccee-eeecc---cCCceEEEEEc
Q psy10867 255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISRQC-LRTIQ---HKGPVLGAFLG 329 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~-~~~~~---~~~~v~~~~~s 329 (343)
++....... .....|...+.+++|+|++++|+ +++.||.|++||+.+++. +..+. +..+|.+++|+
T Consensus 252 ~~~~~~~~~---------~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 252 TKHLEEPLS---------LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp TTBCSSCSE---------EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred CccccCCce---------EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence 987543211 11124677899999999999987 455799999999998873 44443 56899999999
Q ss_pred cCCCeeeecc
Q psy10867 330 LLPPAIHDYD 339 (343)
Q Consensus 330 p~~~~l~~~~ 339 (343)
|++.++++++
T Consensus 323 p~~~~~~s~~ 332 (402)
T 2aq5_A 323 PKRGLEVNKC 332 (402)
T ss_dssp CGGGSCGGGT
T ss_pred cccccceecc
Confidence 9999987654
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.5e-39 Score=270.50 Aligned_cols=267 Identities=19% Similarity=0.220 Sum_probs=225.7
Q ss_pred CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceE
Q psy10867 36 VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLL 112 (343)
Q Consensus 36 ~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~ 112 (343)
++.++.|+|++++ +||+|.+ ++|+|||..+++..+.+. .|...|++++|+|+|++|++ +.|+.|++||+.+++.+
T Consensus 105 d~y~~~l~wS~~n-~lAvgld-~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 105 DYYLNLVDWSSGN-VLAVALD-NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CTTCBCEEECTTS-EEEEEET-TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeEEECCCC-EEEEEeC-CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 3356789999875 6777775 899999999998776544 67788999999999999997 68999999999999999
Q ss_pred EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867 113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS 192 (343)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 192 (343)
..+.+|...+.++.+ ++..+++|+.|+.+++||...... .+..+.+|...+..+.++
T Consensus 183 ~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~---------------------~~~~~~~h~~~~~~~~~~ 239 (420)
T 4gga_A 183 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH---------------------HVATLSGHSQEVCGLRWA 239 (420)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---------------------EEEEEECCSSCEEEEEEC
T ss_pred EEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccce---------------------eeEEecccccceeeeeec
Confidence 999999999998877 468999999999999999887532 556678899999999999
Q ss_pred cCCCceEEEEeeCCCeEEEEecCCCce----EE-EeecCCcEEEEEEcCCCC-EEEE--EcCCCcEEEEEeecccccccc
Q psy10867 193 KLGAKSRVASVSHDRTCKIFDLCTGED----LL-SLILDTRLTCVAFDGTED-NIYM--GTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 193 ~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~-~~~~~~~i~~~~~~~~~~-~l~~--~~~d~~i~i~d~~~~~~~~~~ 264 (343)
|++ .++++++.|+.+++||..+++. +. ...+...|.+++|+|.+. .+++ |+.|+.|++||+.+.....
T Consensus 240 ~~g--~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~-- 315 (420)
T 4gga_A 240 PDG--RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS-- 315 (420)
T ss_dssp TTS--SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE--
T ss_pred CCC--CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce--
Confidence 999 8999999999999999987753 22 334778899999999765 4444 4579999999998755432
Q ss_pred cccCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
.+. +...+.++.|+|+++.+++++ .|+.|++||+.+++++.++. |.+.|++++|+|||++|++++..
T Consensus 316 ---------~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 316 ---------AVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 385 (420)
T ss_dssp ---------EEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred ---------eec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 233 346789999999999888765 78999999999999999999 99999999999999999998753
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=5.7e-38 Score=263.23 Aligned_cols=291 Identities=12% Similarity=0.083 Sum_probs=236.3
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM 84 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~ 84 (343)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++..+ +++..++.|++||+.+++.+..+..+. .+.++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 467888899999999999999999999886 68999999999755 677677999999999998876665444 89999
Q ss_pred EECCCCCEEEE-e-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEE-EEecCCCeEEEeecCccceeeeeecCC
Q psy10867 85 QASPDAAYIAV-S-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 85 ~~s~~~~~l~~-~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
+|+|++++|+. + .++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++....
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~----- 153 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT----- 153 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE-----
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE-----
Confidence 99999998764 4 5699999999999888877755 468999999999977 7888899999999988754332
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCE
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDN 240 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (343)
+.. ...+.+++|+|++ ..+ ++++.++.|++||+++++....+.+...+.+++|+|++++
T Consensus 154 -----------------~~~-~~~~~~~~~~~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 154 -----------------VSV-GRSPKGIAVTPDG--TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTK 213 (391)
T ss_dssp -----------------EEC-CSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSE
T ss_pred -----------------Eec-CCCcceEEECCCC--CEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCE
Confidence 222 3457899999998 555 6788899999999999999888888889999999999999
Q ss_pred EEEEc---CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE-EEEeCCCcEEEEecccceeeee
Q psy10867 241 IYMGT---SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL-LSSSADETLKIWHTISRQCLRT 316 (343)
Q Consensus 241 l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~ 316 (343)
|++++ .++.|++||+.+... +..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~-----------~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKI-----------TARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEE-----------EEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEecCcCCCcEEEEECCCCeE-----------EEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 99987 689999999986543 22334443 57899999999877 6778899999999999999888
Q ss_pred cc-cCCce---EEEEEccCCCeeee
Q psy10867 317 IQ-HKGPV---LGAFLGLLPPAIHD 337 (343)
Q Consensus 317 ~~-~~~~v---~~~~~sp~~~~l~~ 337 (343)
+. +..+. ..+.+.|++..+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (391)
T 1l0q_A 282 MAVGKNPYASGQFIGSIPVQPVYPS 306 (391)
T ss_dssp EECSSSEECCSSCEEECSSCCCCCB
T ss_pred EECCcCCCccceeeecccccccccc
Confidence 87 43332 22556665555433
No 99
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=257.60 Aligned_cols=265 Identities=20% Similarity=0.224 Sum_probs=224.0
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLAT 114 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~ 114 (343)
..++|+||+++ +||+|.+ ++|+|||+++++.++.+. .|...|.+++|+|++++|++ +.|+.|++|++++++.+..
T Consensus 27 y~~~l~WS~~~-~lAvg~D-~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVALD-NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEEET-TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEEeC-CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35789999987 6777765 899999999998876554 67788999999999999997 6899999999999999999
Q ss_pred ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867 115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194 (343)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (343)
+.+|...+.++.+ ++..+++++.++.+++|+...... .+..+.+|...+..+.+.++
T Consensus 105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH---------------------HVATLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---------------------EEEEEECCSSCEEEEEECTT
T ss_pred ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCce---------------------eEEEEcCccCceEEEEEcCC
Confidence 9999998876554 578999999999999999887532 55667789999999999999
Q ss_pred CCceEEEEeeCCCeEEEEecCCCceE-----EEeecCCcEEEEEEcCCCCEE---EEEcCCCcEEEEEeecccccccccc
Q psy10867 195 GAKSRVASVSHDRTCKIFDLCTGEDL-----LSLILDTRLTCVAFDGTEDNI---YMGTSEGVIKSFCLRQVPRTRDHHI 266 (343)
Q Consensus 195 ~~~~~l~~~~~d~~i~~wd~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l---~~~~~d~~i~i~d~~~~~~~~~~~~ 266 (343)
+ .++++++.|+.|++||+++++.. ....+...+.++.++|++..+ ++++.++.|++||.......
T Consensus 162 ~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~----- 234 (318)
T 4ggc_A 162 G--RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----- 234 (318)
T ss_dssp S--SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE-----
T ss_pred C--CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc-----
Confidence 9 89999999999999999987642 222367789999999987643 35678899999998764432
Q ss_pred cCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
....+...+..+.|+|+++.+++++ .|+.|++||+.+++++.++. |.+.|++++|+|++++|++++..
T Consensus 235 -------~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 235 -------SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp -------EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred -------ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 2345677899999999999887654 79999999999999999999 99999999999999999998754
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=272.34 Aligned_cols=290 Identities=16% Similarity=0.184 Sum_probs=221.3
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEe-------------cCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccce
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYK-------------GASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQ 72 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~ 72 (343)
.+++++.||.|++||+.+++....+. +|.. .|.+++|+| ++.++++++.||.|++||+.+++...
T Consensus 58 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 136 (408)
T 4a11_B 58 YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY-SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD 136 (408)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS-CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC-cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce
Confidence 33444448999999999876655443 4777 999999999 77788888888999999999988776
Q ss_pred ecccCCcceEEEEECCCC---CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEee
Q psy10867 73 LRLICPGRISSMQASPDA---AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQ 147 (343)
Q Consensus 73 ~~~~~~~~v~~~~~s~~~---~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd 147 (343)
.+ .+...+.++.|+|.+ .++++ +.++.|++||+.+++.+..+..|...|.+++|+|+++ .+++++.||.|++||
T Consensus 137 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d 215 (408)
T 4a11_B 137 VF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWD 215 (408)
T ss_dssp EE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEE
Confidence 55 477889999999854 47776 6889999999999999999999999999999999998 589999999999999
Q ss_pred cCccce-eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-
Q psy10867 148 LSRLIC-KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL- 225 (343)
Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~- 225 (343)
++.... ...+.... .............|...|.+++|+|++ .+|++++.|+.|++||+++++.......
T Consensus 216 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 286 (408)
T 4a11_B 216 VRRASGCLITLDQHN-------GKKSQAVESANTAHNGKVNGLCFTSDG--LHLLTVGTDNRMRLWNSSNGENTLVNYGK 286 (408)
T ss_dssp TTCSSCCSEECCTTT-------TCSCCCTTTSSCSCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCBCCCCCCC
T ss_pred CCCCCcccccccccc-------cccceeeccccccccCceeEEEEcCCC--CEEEEecCCCeEEEEECCCCccceecccc
Confidence 987642 11111000 000111223335789999999999998 8999999999999999998876544321
Q ss_pred -----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867 226 -----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD 300 (343)
Q Consensus 226 -----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 300 (343)
...+........+..+++++.++.|++||+.+... +..+.+|...|++++|+|++++|++++.|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 287 VCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ-----------ITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp CCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE-----------EEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred ccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc-----------eeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 11222223334456677778899999999987543 55677899999999999999999999999
Q ss_pred CcEEEEecccceeeeecc
Q psy10867 301 ETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 301 g~i~iwd~~~~~~~~~~~ 318 (343)
|.|++||+.+++.+....
T Consensus 356 g~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 356 CNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp SCEEEEEECC--------
T ss_pred CeEEEEeCCCCCccCCCC
Confidence 999999999988776654
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-40 Score=294.70 Aligned_cols=254 Identities=14% Similarity=0.170 Sum_probs=213.6
Q ss_pred EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--CcccceecccCCcceEEEEECCC--CCEEEE-ecCCeEE
Q psy10867 28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--SQEKAQLRLICPGRISSMQASPD--AAYIAV-SIETKLH 102 (343)
Q Consensus 28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~-~~d~~i~ 102 (343)
+..+.+|.+ .|++++|+|++.++++++.||.|++||+. +++....+.+|.+.|.+++|+|+ +++|++ +.||.|+
T Consensus 2 ~~~l~gH~~-~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNE-LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCC-CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcc-eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 356789999 99999999999999999888999999997 55666777799999999999988 888887 6899999
Q ss_pred EEEccCCc--eEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867 103 MWQISSGR--LLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178 (343)
Q Consensus 103 v~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (343)
+||+.+++ .+..+.+|...|.+++|+|+ ++.+++|+.||.|++||++..... ....
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~--------------------~~~~ 140 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--------------------SPII 140 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC--------------------CCEE
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc--------------------ceeE
Confidence 99999986 67788899999999999999 999999999999999999876322 3344
Q ss_pred ecccccceEEEEeecC-------------CCceEEEEeeCCCeEEEEecCCCce----EEEee-cCCcEEEEEEcCC---
Q psy10867 179 KSQHSLPVTHVTLSKL-------------GAKSRVASVSHDRTCKIFDLCTGED----LLSLI-LDTRLTCVAFDGT--- 237 (343)
Q Consensus 179 ~~~~~~~v~~~~~~~~-------------~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~-~~~~i~~~~~~~~--- 237 (343)
+.+|...|.+++|+|. + .++++++.||.|++||++++.. ...+. |...|.+++|+|+
T Consensus 141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~--~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 141 IDAHAIGVNSASWAPATIEEDGEHNGTKES--RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp EECCSSCEEEEEECCCC---------CGGG--CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred eecCCCceEEEEecCcccccccccccCCCC--CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence 5679999999999994 5 7999999999999999988743 33443 6888999999999
Q ss_pred CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
++++++++.||.|++||+......... .......|...|++++|+|++++|++++.||.|++|++.+
T Consensus 219 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~------~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 219 RSYLASVSQDRTCIIWTQDNEQGPWKK------TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SEEEEEEESSSCEEEEEESSSSSCCBC------CBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCEEEEEecCCEEEEecCCCCCCccee------EEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 899999999999999999875432211 1334556889999999999999999999999999999874
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-39 Score=264.80 Aligned_cols=241 Identities=15% Similarity=0.157 Sum_probs=193.4
Q ss_pred ecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc--eEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEee
Q psy10867 73 LRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR--LLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQ 147 (343)
Q Consensus 73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd 147 (343)
.+.+|.+.|.+++|+|+|++|++ +.|++|++||+.++. .+..+.+|.+.|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 34589999999999999999997 689999999998875 4677889999999999986 489999999999999999
Q ss_pred cCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE---Ee-
Q psy10867 148 LSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL---SL- 223 (343)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~---~~- 223 (343)
++++.. +....+.+|...|.+++|+|+..+.+|++++.|+.|++||++.+.... .+
T Consensus 88 ~~~~~~--------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~ 147 (316)
T 3bg1_A 88 EENGTW--------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN 147 (316)
T ss_dssp CSSSCC--------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT
T ss_pred CCCCcc--------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec
Confidence 987531 134556789999999999998322799999999999999998764322 12
Q ss_pred ecCCcEEEEEEcCC-----------------CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867 224 ILDTRLTCVAFDGT-----------------EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS 286 (343)
Q Consensus 224 ~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 286 (343)
.|...+.+++|+|+ +++|++|+.|+.|++||++...... +...+.+|...|.+++
T Consensus 148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~--------~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK--------EEQKLEAHSDWVRDVA 219 (316)
T ss_dssp SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE--------EEECCBCCSSCEEEEE
T ss_pred cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc--------eeeecccCCCceEEEE
Confidence 25677999999997 4789999999999999996432111 1345778999999999
Q ss_pred EccCC----CEEEEEeCCCcEEEEecccc---e-eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 287 CSITG----ITLLSSSADETLKIWHTISR---Q-CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 287 ~s~~~----~~l~s~~~dg~i~iwd~~~~---~-~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|+|++ ++|++++.|++|++|++.+. + ....+. |...|.+++|+|++++|++++..
T Consensus 220 ~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 220 WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS
T ss_pred ecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC
Confidence 99986 78999999999999998763 1 122334 78899999999999999998754
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.5e-38 Score=268.88 Aligned_cols=263 Identities=21% Similarity=0.333 Sum_probs=228.3
Q ss_pred ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCc
Q psy10867 32 KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGR 110 (343)
Q Consensus 32 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~ 110 (343)
.+|.. .|.++++ ++.++++|+.||.|++||+.+++....+.+|...|.+++| ++++|++ +.||.|++||+.+++
T Consensus 130 ~~~~~-~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSK-GVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCC-CEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred cCCCC-cEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 34555 6777766 7888888888899999999999988888899999999999 6778886 689999999999999
Q ss_pred eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867 111 LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT 190 (343)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 190 (343)
.+..+.+|...|.+++|+ +..+++|+.||.|++||+.+..... ....+.+|...|.+++
T Consensus 205 ~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~-------------------~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDIT-------------------LRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCE-------------------EEEEECCCSSCEEEEE
T ss_pred EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCce-------------------eeeEecCCCCcEEEEE
Confidence 999999999999999996 4699999999999999998764322 3356678999999999
Q ss_pred eecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC
Q psy10867 191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS 269 (343)
Q Consensus 191 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 269 (343)
+ ++ .++++++.||.|++||+++++.+..+. +...+.++.++ ++++++|+.||.|++||+++...
T Consensus 264 ~--~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~--------- 328 (435)
T 1p22_A 264 F--DD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC--------- 328 (435)
T ss_dssp E--ET--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE---------
T ss_pred e--CC--CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCE---------
Confidence 9 44 689999999999999999999998887 67889999994 78999999999999999987543
Q ss_pred CCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce---------eeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867 270 TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ---------CLRTIQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 270 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+..+.+|...|.+++| ++++|++|+.||.|++||+.+++ ++..+. |.+.|.+++| ++++|++++
T Consensus 329 --~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s 402 (435)
T 1p22_A 329 --LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 402 (435)
T ss_dssp --EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECC
T ss_pred --EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEe
Confidence 4567789999999998 78899999999999999998876 777777 9999999999 788899887
Q ss_pred cC
Q psy10867 340 FT 341 (343)
Q Consensus 340 ~~ 341 (343)
..
T Consensus 403 ~D 404 (435)
T 1p22_A 403 HD 404 (435)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=269.50 Aligned_cols=278 Identities=10% Similarity=-0.001 Sum_probs=221.5
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---cceecc---------------------------------------
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---KAQLRL--------------------------------------- 75 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---~~~~~~--------------------------------------- 75 (343)
++.+++|+|+|.+++++.+ +.|++||+.+++ .+..+.
T Consensus 6 p~~~v~~s~dg~~l~~~~~-~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAIIK-NCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCEEEECSSSSEEEEEET-TEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred cEEEEEecCCCCEEEEEeC-CeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 7899999999998888876 899999998887 433222
Q ss_pred ---------------cCCcceEEEEECCCCCEE-EE-ecCCeEEEEEcc--CCceEEEec--ccCCCeEEEEEecCCCEE
Q psy10867 76 ---------------ICPGRISSMQASPDAAYI-AV-SIETKLHMWQIS--SGRLLATAS--SHYQPITIVKWSADSNFI 134 (343)
Q Consensus 76 ---------------~~~~~v~~~~~s~~~~~l-~~-~~d~~i~v~~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l 134 (343)
.|.+.|.+++|+|++++| ++ +.|+.|++||+. +++.+..+. .|...|.+++|+|++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence 233369999999999986 65 579999999999 888888876 567899999999999999
Q ss_pred EEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC---CCceEEEEeeCCCeEEE
Q psy10867 135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL---GAKSRVASVSHDRTCKI 211 (343)
Q Consensus 135 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~d~~i~~ 211 (343)
++++.+|.|++|++.+..... .....+.+|...|.+++|+|+ + .+|++++.|+.|++
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~------------------~~~~~~~~h~~~v~~~~~sp~~~~~--~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEK------------------FTQEPILGHVSMLTDVHLIKDSDGH--QFIITSDRDEHIKI 224 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSS------------------CCCCCSEECSSCEEEEEEEECTTSC--EEEEEEETTSCEEE
T ss_pred EEEeCCCcEEEEecCCccccc------------------ccceeeecccCceEEEEEcCCCCCC--cEEEEEcCCCcEEE
Confidence 999999999999998764321 022355679999999999999 7 89999999999999
Q ss_pred EecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC-CC-------------CCcc
Q psy10867 212 FDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS-TS-------------NPDF 275 (343)
Q Consensus 212 wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~-------------~~~~ 275 (343)
||+++++.+..+. |...|.+++|+ ++++|++++.|+.|++||+.+......+..... .. ....
T Consensus 225 wd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 225 SHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp EEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred EECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 9999998887743 78899999999 999999999999999999987654333211000 00 0000
Q ss_pred ccccCcEEEEEEccCCCEEEEEe-CCCcEEEEec--ccc---eeeeecccCCceEEEEEccCCCeeee
Q psy10867 276 IGHEKQVTSLSCSITGITLLSSS-ADETLKIWHT--ISR---QCLRTIQHKGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 276 ~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~--~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~ 337 (343)
......|.+++|+|++++|++++ .|+.|++|++ .++ +.+..+...+.|.+++|+|++.++++
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTL 371 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEE
Confidence 12346799999999999999998 8999999999 565 66777774489999999996544443
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-41 Score=280.57 Aligned_cols=274 Identities=12% Similarity=0.029 Sum_probs=219.8
Q ss_pred ccceEEEecCCCCeEEEEecCCceEEEEEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc--
Q psy10867 3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG-- 79 (343)
Q Consensus 3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~-- 79 (343)
.|.++.|+|++ .++.|++.+++....+. .|.. .|.+++|+|+|..+|+++.||.|++|+.++ .+..+. |..
T Consensus 54 ~v~~V~FsPdg--~~~~~~~~~~~~~~~~~~~~~~-~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~ 127 (588)
T 2j04_A 54 NLFHVKEFPLE--FENKLDFELAQQNGLLNSQPVC-YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNL 127 (588)
T ss_dssp GTEEEEEECCC--CCCTTTTSCCCSSCSSTTSCSC-CEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCS
T ss_pred cEEEEEECCCC--CcceEEEEeCCCceEeecCCCC-cEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcc
Confidence 45677788776 56667766655433443 4456 899999999999999999999999999655 444444 554
Q ss_pred ---ceEEEEECCCCCEEEE-ecCCeEEEEEccCCce-------EEEe----cccCCCeEEEEEecCCCEEEEecCCCeEE
Q psy10867 80 ---RISSMQASPDAAYIAV-SIETKLHMWQISSGRL-------LATA----SSHYQPITIVKWSADSNFIVTGGEDGTIC 144 (343)
Q Consensus 80 ---~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 144 (343)
.|.+++|||||++||+ +.||+|++||+.++.. +.++ .+|.+.|.+++|+|++ +++++.|+.|+
T Consensus 128 ~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 128 SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 5999999999999997 6799999999998853 5665 6788899999999999 88889999999
Q ss_pred EeecCccceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEE
Q psy10867 145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLS 222 (343)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~ 222 (343)
+||+....... ..+.+ .+|...|.+++|+ + ..+++++ +++|++||+.+++. ...
T Consensus 206 lWd~~~~~~~~-------------------~~~tL~~~h~~~V~svaFs--g--~~LASa~-~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 206 SMTVSASSHQP-------------------VSRMIQNASRRKITDLKIV--D--YKVVLTC-PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp EECCCSSSSCC-------------------CEEEEECCCSSCCCCEEEE--T--TEEEEEC-SSEEEEEETTTTEEEEEE
T ss_pred EEECCCCcccc-------------------ceeeecccccCcEEEEEEE--C--CEEEEEe-CCeEEEEECCCCeEEEEE
Confidence 99998764210 12334 3688999999999 4 5888887 69999999998887 444
Q ss_pred eecCCcEEEEEE--cCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867 223 LILDTRLTCVAF--DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD 300 (343)
Q Consensus 223 ~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 300 (343)
+.|...+..++| +|++..+++++.+|+ ++|... .++++||+..+++. |
T Consensus 262 ~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------------------------~~~~spd~~l~a~~--d 311 (588)
T 2j04_A 262 TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------------------------ELHVTADNIIAPYL--E 311 (588)
T ss_dssp CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------------------------SEEEECCCSSHHHH--H
T ss_pred cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------------------------cEEECCCceEEEEc--C
Confidence 468889999999 999999999999999 999754 15689999888875 8
Q ss_pred CcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 301 ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 301 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+++++|+...+ .+..+++...|.+++|||||+.+++++
T Consensus 312 ~~v~lW~~~g~-~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 312 KKFKKWSTIWN-EFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp HHHHHTTTTTT-SSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred CEEEEEECCCC-ceeeeccceEEEEEEECCCCCEEEEEE
Confidence 99999997544 455666766799999999999999765
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9e-38 Score=266.36 Aligned_cols=264 Identities=18% Similarity=0.280 Sum_probs=228.1
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEE
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQ 85 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 85 (343)
.++++++.||.|++||+.+++.+..+.+|.. .|.++++++ ..+++++.||.|++||+.+++.+..+..|...|.+++
T Consensus 170 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAETGECIHTLYGHTS-TVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEECCCCC-cEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE
Confidence 4577888899999999999999999999999 999999964 4577777779999999999998888889999999999
Q ss_pred ECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867 86 ASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 86 ~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
| ++.++++ +.|+.|++||+.+++.+..+.+|...|.+++| ++.++++++.||.|++||+++++
T Consensus 247 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~------------ 310 (445)
T 2ovr_B 247 Y--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN------------ 310 (445)
T ss_dssp E--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC------------
T ss_pred E--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC------------
Confidence 9 5666665 78999999999999999999999999999999 78999999999999999998864
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee----cCCcEEEEEEcCCCCE
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI----LDTRLTCVAFDGTEDN 240 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~----~~~~i~~~~~~~~~~~ 240 (343)
.+..+.+|...+.++.++ + .++++++.||.|++||+++++.+..+. +...|.+++|+ +++
T Consensus 311 ----------~~~~~~~~~~~v~~~~~~--~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 374 (445)
T 2ovr_B 311 ----------CIHTLTGHQSLTSGMELK--D--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF 374 (445)
T ss_dssp ----------EEEEECCCCSCEEEEEEE--T--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE
T ss_pred ----------EEEEEcCCcccEEEEEEe--C--CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE
Confidence 445556788889888875 3 689999999999999999999988886 56789999996 689
Q ss_pred EEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc----EEEEeccc
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET----LKIWHTIS 310 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~----i~iwd~~~ 310 (343)
|++|+.||.|++||+.+.+...... .....+|.+.|++++|+|++.++++|+.||. |.+||+..
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~------~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLV------TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE------ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEeCCCeEEEEECCCCceeeeee------ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9999999999999998765433221 0112468889999999999999999999998 99999864
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-38 Score=262.64 Aligned_cols=244 Identities=16% Similarity=0.202 Sum_probs=204.9
Q ss_pred ccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc--CCceEEEecccCCCeEEEEEecC--CCEEEEecCCCeE
Q psy10867 69 EKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS--SGRLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTI 143 (343)
Q Consensus 69 ~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i 143 (343)
+.+..+.+|.+.|.+++|+|++++|++ +.|+.|++|++. +++.+..+.+|...|.+++|+|+ +++|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 445667799999999999999999997 579999999998 55677888999999999999976 8999999999999
Q ss_pred EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC--CCceEEEEeeCCCeEEEEecCCCceE-
Q psy10867 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL--GAKSRVASVSHDRTCKIFDLCTGEDL- 220 (343)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~- 220 (343)
++||+.++... ....+..|...|.+++|+|+ + .++++++.|+.|++||++++...
T Consensus 82 ~iwd~~~~~~~--------------------~~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 82 LIWKEENGRWS--------------------QIAVHAVHSASVNSVQWAPHEYG--PLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp EEEEEETTEEE--------------------EEEEECCCSSCEEEEEECCGGGC--SEEEEEETTSEEEEEECCTTSCCC
T ss_pred EEEEcCCCcee--------------------EeeeecCCCcceEEEEeCCCCCC--CEEEEecCCCcEEEEecCCCCcee
Confidence 99999886421 44556679999999999999 7 79999999999999999987432
Q ss_pred -EEe-ecCCcEEEEEEcC-------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867 221 -LSL-ILDTRLTCVAFDG-------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL 285 (343)
Q Consensus 221 -~~~-~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 285 (343)
..+ .+...+.+++|+| ++.++++++.|+.|++||++........ ...+.+|...|+++
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------ESTLEGHSDWVRDV 212 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE-------EEEECCCSSCEEEE
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee-------EEEEecccCcEeEE
Confidence 223 3788899999999 6999999999999999999875433221 34577899999999
Q ss_pred EEccC---CCEEEEEeCCCcEEEEecccce-----eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 286 SCSIT---GITLLSSSADETLKIWHTISRQ-----CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 286 ~~s~~---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
+|+|+ +++|++++.||.|++||+.+++ .+.... +...|.+++|+|++++|++++..
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 99999 8999999999999999998863 222222 78899999999999999988653
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.9e-37 Score=263.50 Aligned_cols=286 Identities=11% Similarity=0.045 Sum_probs=236.9
Q ss_pred eEEEEecCCc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce-----ecccCCcceEEEEECC
Q psy10867 16 AISVWEPKGG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ-----LRLICPGRISSMQASP 88 (343)
Q Consensus 16 ~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~s~ 88 (343)
.|..||..++ +.+..+..+. .+.+++|+|++.+++++..++.|++||+.+++... .+..|...|.+++|+|
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGF--QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE 179 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSS--CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG
T ss_pred EEEEECCCCCcceEEEEEcCCC--CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC
Confidence 5555666445 6677777665 56799999988999999888999999999888765 3447888999999999
Q ss_pred CCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867 89 DAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSG 166 (343)
Q Consensus 89 ~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 166 (343)
+++++++ +.|+.|++||+++++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++....
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~---------- 249 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK---------- 249 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE----------
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE----------
Confidence 9998887 5789999999999999999988999999999999999875 555899999999988754332
Q ss_pred CccccccceeeeecccccceEEEEeecCCCceEEEEee--------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCC
Q psy10867 167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS--------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE 238 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (343)
+. +...+.+++|+|++ .++++++ .|+.|++||+++++.+..+.+...+.+++|+|++
T Consensus 250 ------------~~-~~~~~~~~~~~~~g--~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 314 (433)
T 3bws_A 250 ------------TD-KIGLPRGLLLSKDG--KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTE 314 (433)
T ss_dssp ------------CC-CCSEEEEEEECTTS--SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSST
T ss_pred ------------ec-CCCCceEEEEcCCC--CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCC
Confidence 22 23458999999999 6788777 5889999999999888888777789999999999
Q ss_pred CEE-EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC---------------CCc
Q psy10867 239 DNI-YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA---------------DET 302 (343)
Q Consensus 239 ~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---------------dg~ 302 (343)
+.+ ++++.++.|++||+.+.... ..+ .+...+.+++|+|++++|++++. ||.
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~~-----------~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKVQ-----------KSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEE-----------EEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred CEEEEEecCCCEEEEEECCCCcEE-----------EEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 865 55688999999999864432 222 35677999999999998888876 579
Q ss_pred EEEEecccceeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867 303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 303 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
|++||+.+++.+..+.....+.+++|+|++++|++++.
T Consensus 383 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 383 VYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEET
T ss_pred EEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEEC
Confidence 99999999999998887778999999999999987753
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.7e-38 Score=259.58 Aligned_cols=259 Identities=12% Similarity=0.052 Sum_probs=216.7
Q ss_pred EEecCCCCeEEEEecCCce---EEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeC-CCcccceeccc--CCcc
Q psy10867 8 AFSYDGSGAISVWEPKGGT---LLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPV-NSQEKAQLRLI--CPGR 80 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~-~~~~~~~~~~~--~~~~ 80 (343)
+++++.||.|++||+.+++ ....+..|.. .|.+++|+|++. ++++++.||.|++||+ .+++. ..+.. |...
T Consensus 26 l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~ 103 (342)
T 1yfq_A 26 LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLG 103 (342)
T ss_dssp EEEEETTSEEEEEEEETTTTEEEEEEEEECSS-CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSC
T ss_pred EEEEcCCCeEEEEEeCCCCccccceeeeecCC-ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCc
Confidence 3444458999999998776 4555668888 999999999999 8998888899999999 87765 45567 9999
Q ss_pred eEEEEECCCCCEEEE-ecCCeEEEEEccC---------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867 81 ISSMQASPDAAYIAV-SIETKLHMWQISS---------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR 150 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d~~i~v~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 150 (343)
|.+++|+| +.+|++ +.|+.|++||+++ ++++..+. |...|.+++|+|++ +++++.|+.|++||+++
T Consensus 104 v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 104 ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSC
T ss_pred eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCc
Confidence 99999999 877776 7899999999987 76666666 88999999999877 99999999999999987
Q ss_pred -cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCC------ceEEE
Q psy10867 151 -LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTG------EDLLS 222 (343)
Q Consensus 151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~------~~~~~ 222 (343)
.... .......|...+.+++|+| ++ .++++++.||.+++|+++.. +....
T Consensus 180 ~~~~~--------------------~~~~~~~~~~~i~~i~~~~~~~--~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 180 CEDDN--------------------GTIEESGLKYQIRDVALLPKEQ--EGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp CTTCC--------------------CEEEECSCSSCEEEEEECSGGG--CEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred ccccc--------------------ceeeecCCCCceeEEEECCCCC--CEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 4321 2233446788999999999 88 79999999999999999877 66666
Q ss_pred ee-cCC---------cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-cCcEEEEEEccCC
Q psy10867 223 LI-LDT---------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-EKQVTSLSCSITG 291 (343)
Q Consensus 223 ~~-~~~---------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~ 291 (343)
+. +.. .+.+++|+|++++|++++.||.|++||+.+... +..+.+| ...|++++ |++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~~h~~~v~~~~--~~~ 304 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-----------IKNFAKFNEDSVVKIA--CSD 304 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-----------EEECCCCSSSEEEEEE--ECS
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH-----------hhhhhcccCCCceEec--CCC
Confidence 66 433 899999999999999999999999999987544 4456777 99999999 999
Q ss_pred CEEEEEeCCCc-EEEEe
Q psy10867 292 ITLLSSSADET-LKIWH 307 (343)
Q Consensus 292 ~~l~s~~~dg~-i~iwd 307 (343)
++|++++.||. .+.|.
T Consensus 305 ~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 305 NILCLATSDDTFKTNAA 321 (342)
T ss_dssp SEEEEEEECTHHHHCSS
T ss_pred CeEEEEecCCccccccc
Confidence 99999999998 54444
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.5e-38 Score=265.01 Aligned_cols=262 Identities=12% Similarity=0.170 Sum_probs=214.4
Q ss_pred EEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC----------cccceecccCCcceEEEEECCCCC-EEEE-
Q psy10867 29 MSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS----------QEKAQLRLICPGRISSMQASPDAA-YIAV- 95 (343)
Q Consensus 29 ~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~- 95 (343)
.....|.. .|++++|+|+ +.++++++.+|.|++|++.. .+....+..|...|.+++|+|++. +|++
T Consensus 122 ~~~~~h~~-~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEG-EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESS-CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCC-cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 44566787 9999999997 68999999889999999986 455566778999999999999988 7776
Q ss_pred ecCCeEEEEEccCCce-------EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867 96 SIETKLHMWQISSGRL-------LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGK 167 (343)
Q Consensus 96 ~~d~~i~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 167 (343)
+.||.|++|++.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||+++....
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~------------- 267 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS------------- 267 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-------------
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-------------
Confidence 6799999999987422 356678999999999999 7789999999999999999975311
Q ss_pred ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee-cCCcEEEEEEcCCCC-EEEEE
Q psy10867 168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI-LDTRLTCVAFDGTED-NIYMG 244 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~ 244 (343)
.....+..|...|++++|+|+++ .++++++.||.|++||+++ .+.+..+. |...|.+++|+|+++ +|+++
T Consensus 268 ------~~~~~~~~~~~~v~~i~~~p~~~-~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 268 ------KPSHTVDAHTAEVNCLSFNPYSE-FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp ------SCSEEEECCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred ------cceeEeecCCCCeEEEEeCCCCC-CEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEE
Confidence 14455568999999999999984 4799999999999999998 45566666 788999999999985 68899
Q ss_pred cCCCcEEEEEeeccccccccc---ccCCCCCCccccccCcEEEEEEccCCC-EEEEEeCCCcEEEEecccc
Q psy10867 245 TSEGVIKSFCLRQVPRTRDHH---IQDSTSNPDFIGHEKQVTSLSCSITGI-TLLSSSADETLKIWHTISR 311 (343)
Q Consensus 245 ~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~ 311 (343)
+.|+.|++||+.......... ......+..+.+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 999999999998743221100 000122456678999999999999999 8999999999999998754
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-37 Score=264.26 Aligned_cols=274 Identities=14% Similarity=0.085 Sum_probs=221.1
Q ss_pred cccceEEEecCC-------CCeEEEEecCCce---EEEEEecC-------------------------------------
Q psy10867 2 SLLNEVAFSYDG-------SGAISVWEPKGGT---LLMSYKGA------------------------------------- 34 (343)
Q Consensus 2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~---~~~~~~~~------------------------------------- 34 (343)
.|+.++.|++++ ++.|++||+.+|+ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 367778777776 5899999999998 66666533
Q ss_pred -----------------CCCcceEEEEeCCceEE-EEEcCCCeEEEEeCC--Ccccceecc--cCCcceEEEEECCCCCE
Q psy10867 35 -----------------SVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVN--SQEKAQLRL--ICPGRISSMQASPDAAY 92 (343)
Q Consensus 35 -----------------~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~s~~~~~ 92 (343)
.. .|.+++|+|++.++ ++++.||.|++|++. +++.+..+. .|...|.+++|+|++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~-~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYS-YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ---------------CCCC-CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred cccCccccCCCCCCCccCC-ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 22 59999999999875 888888999999999 777776654 56789999999999999
Q ss_pred EEE-ecCCeEEEEEccCCceEE----EecccCCCeEEEEEecC---CCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867 93 IAV-SIETKLHMWQISSGRLLA----TASSHYQPITIVKWSAD---SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 93 l~~-~~d~~i~v~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
|++ +.++.|++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||++++....
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--------- 234 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--------- 234 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE---------
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee---------
Confidence 987 578999999998876543 77789999999999999 9999999999999999998764322
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------------------
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL------------------- 225 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~------------------- 225 (343)
..+.+|...|.+++|+ ++ .+|++++.|+.|++||+++++.+..+..
T Consensus 235 ------------~~~~~h~~~v~~~~~s-d~--~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 235 ------------KWLFGHKHFVSSICCG-KD--YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp ------------EECCCCSSCEEEEEEC-ST--TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred ------------eeecCCCCceEEEEEC-CC--CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence 2245799999999999 88 8999999999999999999998877752
Q ss_pred -------CCcEEEEEEcCCCCEEEEEc-CCCcEEEEEe--ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867 226 -------DTRLTCVAFDGTEDNIYMGT-SEGVIKSFCL--RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295 (343)
Q Consensus 226 -------~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 295 (343)
...+.+++|+|++++|++++ .++.|++|++ ....... .+..+..| ..|.+++|+|++.+++
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~--------~~~~~~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLA--------LKQIITFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp -----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEE--------EEEEEECS-SCEEEEEEETTEEEEE
T ss_pred ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCcee--------eccEeccC-CceEEEEecCCcEEEE
Confidence 24689999999999999998 8999999999 3321111 13445666 7899999999654444
Q ss_pred EEeC------CCcEEEEecc
Q psy10867 296 SSSA------DETLKIWHTI 309 (343)
Q Consensus 296 s~~~------dg~i~iwd~~ 309 (343)
+++. +..|.+|.+.
T Consensus 371 ~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 371 LDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ECCTTCCSSCCCSEEEEEEE
T ss_pred EecccCCCCCCcceEEEEEE
Confidence 4443 4568888764
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-38 Score=266.45 Aligned_cols=248 Identities=8% Similarity=-0.012 Sum_probs=200.9
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS- 116 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~- 116 (343)
.|.+++|+|||+++|+++.|++|+ |...++ .+.+|...|.+++|+|+| .++.+.+|+. +....+.
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg------~~~~~~~~~~---~~~~~~~~ 82 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE------FENKLDFELA---QQNGLLNS 82 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC------CCCTTTTSCC---CSSCSSTT
T ss_pred cEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC------CcceEEEEeC---CCceEeec
Confidence 899999999999999999999999 644443 446899999999999999 4555555553 3222333
Q ss_pred ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc-----ceEEEEe
Q psy10867 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL-----PVTHVTL 191 (343)
Q Consensus 117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~ 191 (343)
.|...|.+++|+|+|.+|++++.||.|++||... .+..+. |.. .+.+++|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------------------------~l~~l~-~~~~~~~~sv~svaf 137 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------------------------MLTNLD-SKGNLSSRTYHCFEW 137 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------------------------EEEECC-CSSCSTTTCEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------------------------eeeecc-CCCccccccEEEEEE
Confidence 5688999999999999999999999999999654 233334 444 5999999
Q ss_pred ecCCCceEEEEeeCCCeEEEEecCCCce-------EEEee-----cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccc
Q psy10867 192 SKLGAKSRVASVSHDRTCKIFDLCTGED-------LLSLI-----LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVP 259 (343)
Q Consensus 192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 259 (343)
+|+| ++|++|+.||+|++||+.+++. +.++. |...|.+++|+|+| +++++.|+.|++||+....
T Consensus 138 SPDG--~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 138 NPIE--SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp CSSS--SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred cCCC--CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 9999 8999999999999999998763 45543 45689999999999 8888899999999997644
Q ss_pred ccccccccCCCCCCcc-ccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee-eeecccCCceEEEEE--ccCCCee
Q psy10867 260 RTRDHHIQDSTSNPDF-IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC-LRTIQHKGPVLGAFL--GLLPPAI 335 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~v~~~~~--sp~~~~l 335 (343)
... ....+ .+|...|.+++|+ ++.||+++ ++.|++||+.+++. ...+.|.+.+..++| +|+++.|
T Consensus 214 ~~~--------~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~L 282 (588)
T 2j04_A 214 HQP--------VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTIL 282 (588)
T ss_dssp SCC--------CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEE
T ss_pred ccc--------ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEE
Confidence 210 01234 3788899999999 68899887 69999999998887 444469999999999 9999999
Q ss_pred eecc
Q psy10867 336 HDYD 339 (343)
Q Consensus 336 ~~~~ 339 (343)
++++
T Consensus 283 a~a~ 286 (588)
T 2j04_A 283 LMSN 286 (588)
T ss_dssp EECS
T ss_pred EEEc
Confidence 8887
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.2e-36 Score=251.38 Aligned_cols=276 Identities=13% Similarity=0.087 Sum_probs=199.4
Q ss_pred EEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--e
Q psy10867 19 VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--S 96 (343)
Q Consensus 19 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~ 96 (343)
||++.+.+++..++.|.. .|.+++|+|||.++++|.++ .+++|++++++...... ...+..+++.++++.++. +
T Consensus 3 i~s~~~~~~~~~~~~h~~-~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSN-PVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CC-CCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCC-ceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEEC
Confidence 577777888888899999 99999999999999999885 58999998877654332 225778889888887753 5
Q ss_pred cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc-ceeeeeecCCCCCCCCccccccce
Q psy10867 97 IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL-ICKQTVAFGIPGSSGKGVTGLTEP 175 (343)
Q Consensus 97 ~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 175 (343)
.|+.|++||+.+++.+..+. +...|.+++|+++. ++++ .|+.|++||+.+. +....+
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~------------------ 136 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDD------------------ 136 (355)
T ss_dssp STTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCC------------------
T ss_pred CccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEe------------------
Confidence 67899999999999988886 66789999998764 4443 3789999999886 333221
Q ss_pred eeeecccccceEEEEeecCCCceEEEE-eeCCCeEEEEecCCCc----------------eEEEee-cCCcEEEEEEcCC
Q psy10867 176 LHVKSQHSLPVTHVTLSKLGAKSRVAS-VSHDRTCKIFDLCTGE----------------DLLSLI-LDTRLTCVAFDGT 237 (343)
Q Consensus 176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~----------------~~~~~~-~~~~i~~~~~~~~ 237 (343)
.. +...+++++ . .++++ |+.||.|++||+++++ .+..+. |...|.+++|+|+
T Consensus 137 ----~~---~~~~~~~s~-~--~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~ 206 (355)
T 3vu4_A 137 ----IR---FGGVCEFSN-G--LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK 206 (355)
T ss_dssp ----EE---EEEEEEEET-T--EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred ----cc---CCceEEEEc-c--EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence 11 334556666 3 34444 7899999999999865 134444 7889999999999
Q ss_pred CCEEEEEcCCCc-EEEEEeecccccccccccCCCCCCccc-c-ccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee
Q psy10867 238 EDNIYMGTSEGV-IKSFCLRQVPRTRDHHIQDSTSNPDFI-G-HEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL 314 (343)
Q Consensus 238 ~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 314 (343)
+++|++|+.|++ |++||+++... +..+. + |...|++++|+|++++|++++.|+.|++||+..+...
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~~~-----------~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~ 275 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDGVL-----------VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDN 275 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTCCE-----------EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCC
T ss_pred CCEEEEEeCCCCEEEEEECCCCcE-----------EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCc
Confidence 999999999998 99999987544 34455 4 8999999999999999999999999999999765311
Q ss_pred --ee--------------------cc--cCCceEEEEEccCCCeeeecccC
Q psy10867 315 --RT--------------------IQ--HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 315 --~~--------------------~~--~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
.. +. ...+...++|+|++++|++++..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 276 KRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp CSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred ccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 11 11 12234679999999999988643
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.3e-37 Score=252.27 Aligned_cols=246 Identities=13% Similarity=0.166 Sum_probs=204.7
Q ss_pred eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEE
Q psy10867 72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTIC 144 (343)
Q Consensus 72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~ 144 (343)
..+.+|.+.|++++|+|++++|++ +.|+.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 445689999999999999999997 67999999999876 46677789999999999999 699999999999999
Q ss_pred EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC--CCceEEEEeeCCCeEEEEecCCCceEEE
Q psy10867 145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL--GAKSRVASVSHDRTCKIFDLCTGEDLLS 222 (343)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 222 (343)
+||++.+..... ....+....+..|...|.+++|+|+ + .++++++.|+.|++||+++++.+..
T Consensus 85 vwd~~~~~~~~~-------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 85 LWEEDPDQEECS-------------GRRWNKLCTLNDSKGSLYSVKFAPAHLG--LKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp EEEECTTSCTTS-------------SCSEEEEEEECCCSSCEEEEEECCGGGC--SEEEEEETTCEEEEEECSSTTCTTC
T ss_pred EEecCCCccccc-------------ccCcceeeeecccCCceeEEEEcCCCCC--cEEEEecCCCcEEEecCCChHHhcc
Confidence 999987532110 0011256677789999999999999 7 8999999999999999998775433
Q ss_pred e--------------ecCCcEEEEEEcCC---CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867 223 L--------------ILDTRLTCVAFDGT---EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL 285 (343)
Q Consensus 223 ~--------------~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 285 (343)
+ .+...+.+++|+|+ +.++++++.++.+.+|+........ +..+.+|...|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~h~~~i~~~ 220 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV---------AAKLPGHKSLIRSI 220 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE---------EEECCCCCSCEEEE
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee---------eeecCCCCcceeEE
Confidence 2 24567999999997 8999999999999777765432211 34567899999999
Q ss_pred EEccCC----CEEEEEeCCCcEEEEecccc----------------------------------------------eeee
Q psy10867 286 SCSITG----ITLLSSSADETLKIWHTISR----------------------------------------------QCLR 315 (343)
Q Consensus 286 ~~s~~~----~~l~s~~~dg~i~iwd~~~~----------------------------------------------~~~~ 315 (343)
+|+|++ ++|++++.||.|++||+.++ +.+.
T Consensus 221 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (351)
T 3f3f_A 221 SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLS 300 (351)
T ss_dssp EECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEE
T ss_pred EECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEE
Confidence 999998 89999999999999999875 5666
Q ss_pred ecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 316 TIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 316 ~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
.+. |...|++++|+|++++|++++..
T Consensus 301 ~~~~h~~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 301 EHDDHNGEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp EECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred EEecccccEEEEEEcCCCCEEEEecCC
Confidence 676 88999999999999999998754
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-37 Score=252.98 Aligned_cols=257 Identities=11% Similarity=0.069 Sum_probs=188.6
Q ss_pred EeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEcc---------CCceEEE
Q psy10867 44 LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS---------SGRLLAT 114 (343)
Q Consensus 44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~---------~~~~~~~ 114 (343)
+.+++.++++|+.||.|++||+.+++.+..+. ...|.++.|+|+ ++.++.|+.|++|+.. +++.+..
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 34567788888888999999988887765543 456777778877 4445778888888654 5554544
Q ss_pred ec-ccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEe
Q psy10867 115 AS-SHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191 (343)
Q Consensus 115 ~~-~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 191 (343)
+. +|.++|.+++|+| +++++++++.||.|++||++++...... ...+...+.+++|
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~---------------------~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH---------------------SAKSDVEYSSGVL 178 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE---------------------CCCSSCCCCEEEE
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE---------------------ecCCCCceEEEEE
Confidence 44 6778999999999 9999999999999999999987542211 1235667999999
Q ss_pred ecCCCceEEEEeeCCCeEEEEecCCCceE-EEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC
Q psy10867 192 SKLGAKSRVASVSHDRTCKIFDLCTGEDL-LSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD 268 (343)
Q Consensus 192 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 268 (343)
+|++ .++++|+.||.|++||+++++.. ..+. |..+|.+++|+|++.+|++++ ++.|++||++.......
T Consensus 179 ~pdg--~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~----- 250 (343)
T 3lrv_A 179 HKDS--LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLA----- 250 (343)
T ss_dssp CTTS--CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBS-----
T ss_pred CCCC--CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCccee-----
Confidence 9999 89999999999999999999877 6665 588999999999999999999 55999999988654332
Q ss_pred CCCCCccccccCcE--EEEEEccCCCEEEEEeC-CCcEEEEecccceeeeecccCCceEEEEEcc---CCCeeeecc
Q psy10867 269 STSNPDFIGHEKQV--TSLSCSITGITLLSSSA-DETLKIWHTISRQCLRTIQHKGPVLGAFLGL---LPPAIHDYD 339 (343)
Q Consensus 269 ~~~~~~~~~~~~~v--~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~ 339 (343)
+..+..|...+ .+++|+|++++|++++. |+.|++|++.+....... .++..+.|+| +.+.|++++
T Consensus 251 ---~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~ 321 (343)
T 3lrv_A 251 ---YPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVC 321 (343)
T ss_dssp ---SCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEE
T ss_pred ---ecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEe
Confidence 11222233344 36999999999999998 999999998665432222 3444555555 444444443
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=253.73 Aligned_cols=268 Identities=11% Similarity=0.106 Sum_probs=214.4
Q ss_pred eEEEecCCCCeEEEEecCC-ceEE-EEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE
Q psy10867 6 EVAFSYDGSGAISVWEPKG-GTLL-MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS 83 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~ 83 (343)
..+++++.||.|++||+.+ ++.+ ..+.+|.. .|.+++|+|++.++++++.||.|++||+.+++... ...|...|.+
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~ 132 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG-PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT 132 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSCEEEEEEEECSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCceeEEEeccccC-CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence 3445555589999999987 5555 78889999 99999999999999999988999999999988766 4579999999
Q ss_pred EEE--CCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867 84 MQA--SPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 84 ~~~--s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 160 (343)
++| +|++++|++ +.|+.|++||+++++.+..+..+. .+.++.+. ...+++++.++.+++|+++.......
T Consensus 133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---- 205 (368)
T 3mmy_A 133 IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFR---- 205 (368)
T ss_dssp EEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEE----
T ss_pred EEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhh----
Confidence 999 899988886 689999999999999888887665 56666665 45788889999999999987543221
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeecCCC--ceEEEEeeCCCeEEEEecCCC---ceEEEeecC-C-------
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA--KSRVASVSHDRTCKIFDLCTG---EDLLSLILD-T------- 227 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~---~~~~~~~~~-~------- 227 (343)
.....+...+.++++.++.. ...+++++.|+.|++||++.. +....+... .
T Consensus 206 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (368)
T 3mmy_A 206 ----------------RIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269 (368)
T ss_dssp ----------------ECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CC
T ss_pred ----------------hccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccc
Confidence 11123444556666665541 134999999999999999887 445555532 2
Q ss_pred -----cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867 228 -----RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET 302 (343)
Q Consensus 228 -----~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 302 (343)
.+.+++|+|++++|++++.||.|++||+.+... +..+.+|...|++++|+|++++|++++.|+.
T Consensus 270 ~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK-----------LKTSEQLDQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-----------EEECCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred cccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE-----------EEEecCCCCCceEEEECCCCCeEEEEecccc
Confidence 699999999999999999999999999987544 4456789999999999999999999999986
Q ss_pred EEEEecc
Q psy10867 303 LKIWHTI 309 (343)
Q Consensus 303 i~iwd~~ 309 (343)
.+.|++.
T Consensus 339 ~~~~~~~ 345 (368)
T 3mmy_A 339 SKGHEFY 345 (368)
T ss_dssp TTCGGGC
T ss_pred ccccccc
Confidence 6666544
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.6e-36 Score=246.51 Aligned_cols=291 Identities=11% Similarity=0.116 Sum_probs=212.4
Q ss_pred cccceEEEecCC-------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEE-EEEcCCCeEEEEeCCCccccee
Q psy10867 2 SLLNEVAFSYDG-------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL-GVEKGKPMIQAWPVNSQEKAQL 73 (343)
Q Consensus 2 ~~v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~iw~~~~~~~~~~ 73 (343)
.+|.++.|++++ +..++|||+.+++.......+ .+..+++.+++.++ ++++.++.|++||..+++.+..
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMR---HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECS---CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecC---CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 467888888887 356899999888776654433 46778888776555 5566678999999999988776
Q ss_pred cccCCcceEEEEECCCCCEEEEecCCeEEEEEccCC-ceEEEecccCCCeEEEEEecCCCEEEE--ecCCCeEEEeecCc
Q psy10867 74 RLICPGRISSMQASPDAAYIAVSIETKLHMWQISSG-RLLATASSHYQPITIVKWSADSNFIVT--GGEDGTICVWQLSR 150 (343)
Q Consensus 74 ~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~ 150 (343)
+. +...|.+++|+++. ++++.++.|++||+.++ +.+..+.. +...+++++ .+++. |+.||.|++||+++
T Consensus 97 ~~-~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 97 IK-VDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp EE-CSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC
T ss_pred EE-CCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCC
Confidence 64 67799999998764 55556899999999988 66555544 445566776 55655 68999999999987
Q ss_pred cceeeeeecCCCCCCCCccccccce-eeeecccccceEEEEeecCCCceEEEEeeCCCe-EEEEecCCCceEEEee---c
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEP-LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT-CKIFDLCTGEDLLSLI---L 225 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~---~ 225 (343)
+......... .......+ ...+.+|...|.+++|+|++ .+|++++.|++ |++||+++++.+..+. |
T Consensus 169 ~~~~~~~~~~-------~~~~~~~p~~~~~~~h~~~v~~~~~s~~g--~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 169 SGSATTQDQG-------VQQKAILGKGVLIKAHTNPIKMVRLNRKS--DMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp -------------------------CCEEECCCSSCEEEEEECTTS--SEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred CCcccccccc-------ccccccCcccEEEEccCCceEEEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 5421110000 00000113 67788999999999999999 89999999998 9999999999999997 7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC---------CCCCCc--c-ccccCcEEEEEEccCCCE
Q psy10867 226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD---------STSNPD--F-IGHEKQVTSLSCSITGIT 293 (343)
Q Consensus 226 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~~~~~--~-~~~~~~v~~~~~s~~~~~ 293 (343)
...|.+++|+|++++|++++.|+.|++||++.........+.. ...... + ..+......++|++++++
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 8899999999999999999999999999997653222111100 000000 0 111223467899999999
Q ss_pred EEEEeCCCcEEEEecccce
Q psy10867 294 LLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 294 l~s~~~dg~i~iwd~~~~~ 312 (343)
|++++.||.+++|++..++
T Consensus 320 l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 320 VVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEEETTTTEEEEEEEEEET
T ss_pred EEEEeCCCeEEEEEEEcCC
Confidence 9999999999999987644
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-35 Score=251.94 Aligned_cols=268 Identities=10% Similarity=0.057 Sum_probs=224.9
Q ss_pred ceEEEecCCCCeEEEEecCCceEEE-----EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLM-----SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG 79 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~ 79 (343)
..++++++.++.|++||+.+++.+. .+.+|.. .|.+++|+|++.+++++..++.|++||+.+++.+..+..|..
T Consensus 134 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~ 212 (433)
T 3bws_A 134 TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG-FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK 212 (433)
T ss_dssp SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC-EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS
T ss_pred CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC-ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC
Confidence 3466666778999999999998887 4557887 999999999999999999999999999999888877778889
Q ss_pred ceEEEEECCCCCEEE-Ee-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--------CCCeEEEeecC
Q psy10867 80 RISSMQASPDAAYIA-VS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--------EDGTICVWQLS 149 (343)
Q Consensus 80 ~v~~~~~s~~~~~l~-~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--------~dg~i~iwd~~ 149 (343)
.+.+++|+|++++++ ++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.+++++ .||.|++||+.
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 999999999998775 44 6899999999999888887754 4589999999999999887 58899999998
Q ss_pred ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcE
Q psy10867 150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL 229 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i 229 (343)
+++.... ..+...+.+++|+|+++ .++++++.++.|++||+++++....+.+...+
T Consensus 292 ~~~~~~~-----------------------~~~~~~~~~~~~~~~g~-~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 347 (433)
T 3bws_A 292 KEKLIDT-----------------------IGPPGNKRHIVSGNTEN-KIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKP 347 (433)
T ss_dssp TTEEEEE-----------------------EEEEECEEEEEECSSTT-EEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred CCcEEee-----------------------ccCCCCcceEEECCCCC-EEEEEecCCCEEEEEECCCCcEEEEecCCCCC
Confidence 8643322 23556888999999984 46677789999999999999998888888899
Q ss_pred EEEEEcCCCCEEEEEcC---------------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE
Q psy10867 230 TCVAFDGTEDNIYMGTS---------------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL 294 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~~~---------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 294 (343)
.+++|+|+++++++++. ||.|++||+.+.+... .+.. ...+.+++|+|++++|
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~-----------~~~~-~~~~~~~~~s~dg~~l 415 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE-----------FWEA-GNQPTGLDVSPDNRYL 415 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE-----------EEEC-SSSEEEEEECTTSCEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE-----------EecC-CCCCceEEEcCCCCEE
Confidence 99999999999988876 5799999987754322 2333 4578999999999999
Q ss_pred EEEeC-CCcEEEEeccc
Q psy10867 295 LSSSA-DETLKIWHTIS 310 (343)
Q Consensus 295 ~s~~~-dg~i~iwd~~~ 310 (343)
++++. |+.|++|++..
T Consensus 416 ~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 416 VISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEETTTTEEEEEEETT
T ss_pred EEEECCCCeEEEEEecC
Confidence 88775 99999999863
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.4e-36 Score=253.13 Aligned_cols=241 Identities=17% Similarity=0.287 Sum_probs=200.7
Q ss_pred cccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEccC----------CceEEEecccCCCeEEEEEecCCC-EEEEecCC
Q psy10867 74 RLICPGRISSMQASPD-AAYIAV-SIETKLHMWQISS----------GRLLATASSHYQPITIVKWSADSN-FIVTGGED 140 (343)
Q Consensus 74 ~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d 140 (343)
...|.+.|++++|+|+ +.+|++ +.+|.|++|++.+ ...+..+.+|...|.+++|+|++. +|++|+.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 4578999999999997 667776 5789999999987 567778889999999999999988 99999999
Q ss_pred CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC---
Q psy10867 141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG--- 217 (343)
Q Consensus 141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--- 217 (343)
|.|++||+......... ..+...+..|...|.+++|+|++. .++++++.|+.|++||++++
T Consensus 204 g~i~vwd~~~~~~~~~~---------------~~~~~~~~~h~~~v~~v~~~p~~~-~~l~s~~~dg~i~i~d~~~~~~~ 267 (430)
T 2xyi_A 204 HTICLWDINATPKEHRV---------------IDAKNIFTGHTAVVEDVAWHLLHE-SLFGSVADDQKLMIWDTRNNNTS 267 (430)
T ss_dssp SCEEEEETTSCCBGGGE---------------EECSEEECCCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCSCSS
T ss_pred CeEEEEeCCCCCCCCce---------------eccceeecCCCCCEeeeEEeCCCC-CEEEEEeCCCeEEEEECCCCCCC
Confidence 99999999874221100 013456678999999999999543 79999999999999999987
Q ss_pred ceEEEee-cCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC-EE
Q psy10867 218 EDLLSLI-LDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI-TL 294 (343)
Q Consensus 218 ~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l 294 (343)
+.+..+. +...+.+++|+|+++ ++++|+.||.|++||++.... ++..+..|...|++++|+|+++ +|
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~----------~~~~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL----------KLHSFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----------CSEEEECCSSCEEEEEECSSCTTEE
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC----------CeEEeecCCCCEEEEEECCCCCCEE
Confidence 4555554 788999999999987 688999999999999986432 2556778999999999999985 68
Q ss_pred EEEeCCCcEEEEeccc--------------ceeeeecc-cCCceEEEEEccCCC-eeeeccc
Q psy10867 295 LSSSADETLKIWHTIS--------------RQCLRTIQ-HKGPVLGAFLGLLPP-AIHDYDF 340 (343)
Q Consensus 295 ~s~~~dg~i~iwd~~~--------------~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~ 340 (343)
++++.|+.|++||+.. .+.+..+. |...|++++|+|+++ +|++++.
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~ 399 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE 399 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC
Confidence 9999999999999987 24555665 888999999999999 6777664
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-36 Score=269.51 Aligned_cols=241 Identities=16% Similarity=0.203 Sum_probs=201.6
Q ss_pred eecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc--CCceEEEecccCCCeEEEEEecC--CCEEEEecCCCeEEEe
Q psy10867 72 QLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS--SGRLLATASSHYQPITIVKWSAD--SNFIVTGGEDGTICVW 146 (343)
Q Consensus 72 ~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iw 146 (343)
..+.+|.+.|++++|+|++++|++ +.||.|++||+. +++.+..+.+|.++|.+++|+|+ +++|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 456689999999999999998887 689999999998 55677888999999999999987 9999999999999999
Q ss_pred ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC--CCceEEEEeeCCCeEEEEecCCCce---EE
Q psy10867 147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL--GAKSRVASVSHDRTCKIFDLCTGED---LL 221 (343)
Q Consensus 147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~---~~ 221 (343)
|+.++.. .....+..|...|.+++|+|+ + .++++++.||.|++||++++.. ..
T Consensus 83 d~~~~~~--------------------~~~~~~~~h~~~V~~v~~sp~~~~--~~l~sgs~dg~I~vwdl~~~~~~~~~~ 140 (753)
T 3jro_A 83 KEENGRW--------------------SQIAVHAVHSASVNSVQWAPHEYG--PLLLVASSDGKVSVVEFKENGTTSPII 140 (753)
T ss_dssp EEETTEE--------------------EEEEEECCCSSCEEEEEECCGGGC--SEEEEEETTSEEEEEECCSSSCCCCEE
T ss_pred ECCCCcc--------------------cccccccCCCCCeEEEEECCCCCC--CEEEEEeCCCcEEEEEeecCCCcceeE
Confidence 9987632 145566789999999999999 7 8999999999999999988732 22
Q ss_pred EeecCCcEEEEEEcC-------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867 222 SLILDTRLTCVAFDG-------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS 288 (343)
Q Consensus 222 ~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 288 (343)
...+...+.+++|+| +++++++|+.||.|++||++........ ...+.+|...|++++|+
T Consensus 141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~-------~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------ESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE-------EEEECCCSSCEEEEEEC
T ss_pred eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee-------eeeecCCCCcEEEEEec
Confidence 234788999999999 5899999999999999999875432211 44677899999999999
Q ss_pred cC---CCEEEEEeCCCcEEEEecccce-----eeeecc-cCCceEEEEEccCCCeeeecccC
Q psy10867 289 IT---GITLLSSSADETLKIWHTISRQ-----CLRTIQ-HKGPVLGAFLGLLPPAIHDYDFT 341 (343)
Q Consensus 289 ~~---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~ 341 (343)
|+ +++|++++.||.|++||+.+++ .+.... +.+.|++++|+|++++|++++..
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 99 8999999999999999998864 222222 78899999999999999998754
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.6e-35 Score=233.11 Aligned_cols=260 Identities=13% Similarity=0.090 Sum_probs=187.0
Q ss_pred EEecCCCCeEEEEecCCc---eEEEEEecCCCCcceEEEEeCCc-eEEEEEcCCCeE-EEEeC--CCc----ccceeccc
Q psy10867 8 AFSYDGSGAISVWEPKGG---TLLMSYKGASVLSPHSMCLLGND-YVLGVEKGKPMI-QAWPV--NSQ----EKAQLRLI 76 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i-~iw~~--~~~----~~~~~~~~ 76 (343)
++..-.+..|++|+..++ +.++++++|+. +|..+.+.||. .++..+-.+=.+ .++-+ ... .......+
T Consensus 56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITACEDVVSLWKALDAWQWEKLYTWHFAEV-PVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEESSEEEEEEESSSSBEEEEEEEECCSS-CEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEeccceEEEcccCCCccceeeEEEeccCc-eeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 444444678999999998 89999999998 99999999964 222222221111 11111 111 11111123
Q ss_pred CCcceEEEEECCCCCEEEEe---cCCeEEEEEc-cCCceEEEecccCCCeEEEEEec---CCCEEEEecCCCeEEEeecC
Q psy10867 77 CPGRISSMQASPDAAYIAVS---IETKLHMWQI-SSGRLLATASSHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLS 149 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~~---~d~~i~v~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~ 149 (343)
|...|..+ ++++++.++ .|+.|++|++ .+|+.+..+.+|...+..++|+| ++..|++++.|++|+|||+.
T Consensus 135 ~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 135 NIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 44445554 577777774 4999999999 55888888889999999999999 77999999999999999999
Q ss_pred ccceeeeeecCCCCCCCCccccccceeeeeccc---ccceEEEEeecCCCceEE------------EEeeCCCeEEEEec
Q psy10867 150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH---SLPVTHVTLSKLGAKSRV------------ASVSHDRTCKIFDL 214 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l------------~~~~~d~~i~~wd~ 214 (343)
+++...++ .+| ...+.+++|+|++ .++ ++|+.|++|++||.
T Consensus 212 TGk~l~tL----------------------~g~~~~v~~v~~vafSpdG--~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 212 TGQLLKKM----------------------HIDDSYQASVCHKAYSEMG--LLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp TCCEEEEE----------------------ECCC---CCCEEEEEEETT--EEEEEEC------------CCEEEEEEET
T ss_pred CCcEEEEE----------------------cCCCcceeeeEEEEECCCC--CEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 98655443 333 3467788999998 665 66889999999999
Q ss_pred CCCceEEEee------cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEE
Q psy10867 215 CTGEDLLSLI------LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSC 287 (343)
Q Consensus 215 ~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 287 (343)
.+++.+..+. +...+.+..++ +.++++++.|++|+|||+.+.+. +.++.+|...+. .++|
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~-----------l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQC-----------TALLPPVSDQHWSFVKW 334 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSE-----------EEEECCC--CCCCEEEE
T ss_pred CCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcE-----------EEEecCCCCCeEEEEEE
Confidence 9998876552 22233333333 77899999999999999987544 556778877655 5899
Q ss_pred ccCCCEEEEEeCCCcEEEEec
Q psy10867 288 SITGITLLSSSADETLKIWHT 308 (343)
Q Consensus 288 s~~~~~l~s~~~dg~i~iwd~ 308 (343)
+|||++|++|+.|++|+|||+
T Consensus 335 SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999996
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.2e-36 Score=249.41 Aligned_cols=278 Identities=10% Similarity=0.067 Sum_probs=191.3
Q ss_pred cceEEEEe---CC-ceEEEEEcCCCeEEEEeCCCcccc---------eecccCCcceEEEEEC-----------------
Q psy10867 38 SPHSMCLL---GN-DYVLGVEKGKPMIQAWPVNSQEKA---------QLRLICPGRISSMQAS----------------- 87 (343)
Q Consensus 38 ~v~~~~~~---~~-~~~~~~~~~~~~i~iw~~~~~~~~---------~~~~~~~~~v~~~~~s----------------- 87 (343)
...++.|. |+ ..++++|.+ +.|.+|+....... .....+..++..+.|+
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHD-TGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVN 95 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEES-SEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC---------
T ss_pred CCeEEEEeCCCCCCCCEEEEECC-CCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCccee
Confidence 55667774 22 367777766 78999975322110 0011233344444443
Q ss_pred ---CCCCEEEE-ecCCeEEEEEccCCceE-----EEecccCCCeEEEEEec--------CCCEEEEecCCCeEEEeecCc
Q psy10867 88 ---PDAAYIAV-SIETKLHMWQISSGRLL-----ATASSHYQPITIVKWSA--------DSNFIVTGGEDGTICVWQLSR 150 (343)
Q Consensus 88 ---~~~~~l~~-~~d~~i~v~~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~s~~~dg~i~iwd~~~ 150 (343)
+++.+|++ +.|++|++||+++++.. ..+.+|.+.|.+++|+| ++++|++++.|++|+|||+++
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 34557776 68999999999988653 34678999999999998 789999999999999999977
Q ss_pred cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-------
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL------- 223 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------- 223 (343)
.. +...+..|..++.+++|+|++. .+|++++.|++|++||+++++.....
T Consensus 176 ~~----------------------~~~~~~~~~~~v~~v~~~p~~~-~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~ 232 (393)
T 4gq1_A 176 EG----------------------PILAGYPLSSPGISVQFRPSNP-NQLIVGERNGNIRIFDWTLNLSAEENSQTELVK 232 (393)
T ss_dssp TE----------------------EEEEEEECSSCEEEEEEETTEE-EEEEEEETTSEEEEEETTCCC----------CS
T ss_pred Cc----------------------eeeeecCCCCCcEEEEECCCCC-ceEEecCCCCEEEEEECCCCcccccccccCCcc
Confidence 53 4445567889999999999873 58999999999999999987654322
Q ss_pred -------------------ecCCcEEEEEEc-CCCCEEEEEcCCCcEEEEEeecccccccccccCCC--------CCCcc
Q psy10867 224 -------------------ILDTRLTCVAFD-GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST--------SNPDF 275 (343)
Q Consensus 224 -------------------~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~~~ 275 (343)
.+...+.++.|+ |+++.+++++.|+.+++||+........+...... .....
T Consensus 233 ~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 233 NPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI 312 (393)
T ss_dssp CCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEE
T ss_pred cceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence 134457788886 79999999999999999999875543322110000 00011
Q ss_pred ccccCcEEEEEEcc--CCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867 276 IGHEKQVTSLSCSI--TGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 276 ~~~~~~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
..+...+ ...++| ++.++++|+.||.|++||+.+++.+..+. |..+|++++|+|||++|++++-
T Consensus 313 ~~~~~~~-~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 313 SLFPSLL-GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp CSSCCSS-CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cccCcce-eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 1112222 233444 34467788999999999999998887766 8899999999999999998863
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=1.2e-34 Score=243.93 Aligned_cols=281 Identities=15% Similarity=0.048 Sum_probs=220.9
Q ss_pred CCCC----eEEEEec--CCceEE--EEEecCCCCcceEEEEeC---------------CceEEEEEcC--C---CeEEEE
Q psy10867 12 DGSG----AISVWEP--KGGTLL--MSYKGASVLSPHSMCLLG---------------NDYVLGVEKG--K---PMIQAW 63 (343)
Q Consensus 12 ~~dg----~i~iwd~--~~~~~~--~~~~~~~~~~v~~~~~~~---------------~~~~~~~~~~--~---~~i~iw 63 (343)
.++| .|++||+ .+++.+ ..+.+|.. .+..+++++ +.++++++.+ + +.|++|
T Consensus 86 ~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~ 164 (415)
T 2hqs_A 86 NPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQ-WLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVS 164 (415)
T ss_dssp CTTSCEEEEEEEEECSSSTTCEEEEEEEEECGG-GHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEE
T ss_pred CCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChh-HHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEE
Confidence 4567 8999999 899887 55888887 788887765 4566665554 2 699999
Q ss_pred eCCCcccceecccCCcceEEEEECCCCCEEEE-ecC---CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-Eec
Q psy10867 64 PVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE---TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGG 138 (343)
Q Consensus 64 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d---~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~ 138 (343)
|++.. ..+.+..|...+.+++|+|||+.|+. +.+ ..|++||+.+++.. .+..|.+.+.+++|+||++.|+ +++
T Consensus 165 d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~ 242 (415)
T 2hqs_A 165 DYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALS 242 (415)
T ss_dssp ETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred cCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEe
Confidence 99854 45566688899999999999999986 455 39999999998875 4667888999999999999887 666
Q ss_pred CCCe--EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CC--eEEEEe
Q psy10867 139 EDGT--ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DR--TCKIFD 213 (343)
Q Consensus 139 ~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~--~i~~wd 213 (343)
.++. |++||+.++. ...+..|...+.+++|+|++ ++|++++. ++ .|++||
T Consensus 243 ~~g~~~i~~~d~~~~~-----------------------~~~l~~~~~~~~~~~~spdg--~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 243 KTGSLNLYVMDLASGQ-----------------------IRQVTDGRSNNTEPTWFPDS--QNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp TTSSCEEEEEETTTCC-----------------------EEECCCCSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEE
T ss_pred cCCCceEEEEECCCCC-----------------------EEeCcCCCCcccceEECCCC--CEEEEEECCCCCcEEEEEE
Confidence 6554 9999998763 34455678889999999999 67777765 44 688889
Q ss_pred cCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC---CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867 214 LCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE---GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 214 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
+.+++......+...+.+++|+|+|++|++++.+ ..|++||+.+... ..+..+. .+.+++|+|+
T Consensus 298 ~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~------------~~l~~~~-~~~~~~~spd 364 (415)
T 2hqs_A 298 INGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV------------QVLSSTF-LDETPSLAPN 364 (415)
T ss_dssp TTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE------------EECCCSS-SCEEEEECTT
T ss_pred CCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE------------EEecCCC-CcCCeEEcCC
Confidence 9888754433456778999999999999988764 5899999876432 1233343 7899999999
Q ss_pred CCEEEEEeCCC---cEEEEecccceeeeecc-cCCceEEEEEccCCCe
Q psy10867 291 GITLLSSSADE---TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPA 334 (343)
Q Consensus 291 ~~~l~s~~~dg---~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~ 334 (343)
|++|++++.++ .|++||+. ++....+. +.+.|.+++|+|.-.+
T Consensus 365 g~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 365 GTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp SSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCCC
T ss_pred CCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccccc
Confidence 99999888877 79999986 55566666 8899999999997654
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7.7e-36 Score=249.87 Aligned_cols=252 Identities=10% Similarity=0.051 Sum_probs=176.3
Q ss_pred EeCCceEEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECC--------CCCEEEE-ecCCeEEEEEccCC
Q psy10867 44 LLGNDYVLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASP--------DAAYIAV-SIETKLHMWQISSG 109 (343)
Q Consensus 44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~--------~~~~l~~-~~d~~i~v~~~~~~ 109 (343)
+++++.++++++.|++|+|||..+++.. ..+.+|.+.|++++|+| |+++||+ +.|++|+|||+.++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 3445678999999999999999887643 34568999999999998 7889997 78999999999999
Q ss_pred ceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc---ccccceeeeecccccc
Q psy10867 110 RLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV---TGLTEPLHVKSQHSLP 185 (343)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 185 (343)
.++..+..|..+|.+++|+|++ .+|++++.||.|++||++++.................. ...........+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 8888888899999999999977 48999999999999999987654433211111100000 0011122234578889
Q ss_pred eEEEEee-cCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEE------------------EEEEcC--CCCEEEE
Q psy10867 186 VTHVTLS-KLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLT------------------CVAFDG--TEDNIYM 243 (343)
Q Consensus 186 v~~~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~------------------~~~~~~--~~~~l~~ 243 (343)
+.++.|+ |++ ..+++++.|+++++||+.+++....+. +...+. ...++| ++.++++
T Consensus 257 v~~v~~~~~dg--~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 257 LANVRWIGSDG--SGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp CSEEEEETTTT--CEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ceeeeeecCCC--CEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 9999997 677 799999999999999998776554443 221222 223443 3346677
Q ss_pred EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 244 GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 244 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
|+.||.|++||+..... ...+.+|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 335 gs~Dg~V~lwd~~~~~~-----------~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDS-----------NSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ETTTTEEEEEETTCTTC-----------CEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred ECCCCEEEEEECCCCcE-----------EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 88999999999987543 445667889999999999999999998776 6666654
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.1e-33 Score=237.18 Aligned_cols=252 Identities=12% Similarity=0.049 Sum_probs=209.2
Q ss_pred ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEE
Q psy10867 48 DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIV 125 (343)
Q Consensus 48 ~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~ 125 (343)
+.++++++.++.|++||+.+++....+..| ..+.+++|+|++++++ + +.++.|++||+.+++.+..+..+. .+.++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 467888888899999999999888766555 4589999999999774 4 478999999999999988887655 89999
Q ss_pred EEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEe
Q psy10867 126 KWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASV 203 (343)
Q Consensus 126 ~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~ 203 (343)
+|+|++++|+ +++.++.|++||+.+++.... +. +...+.+++|+|++ +.+ +++
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~----------------------~~-~~~~~~~~~~s~dg--~~l~~~~ 134 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT----------------------VK-TGKSPLGLALSPDG--KKLYVTN 134 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEE----------------------EE-CSSSEEEEEECTTS--SEEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEE----------------------Ee-CCCCcceEEECCCC--CEEEEEe
Confidence 9999999775 555779999999998754332 22 34568999999998 555 788
Q ss_pred eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEE-EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcE
Q psy10867 204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNI-YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV 282 (343)
Q Consensus 204 ~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v 282 (343)
+.++.|++||+++++.+..+.....+..++|+|+++++ ++++.++.|++||++...... .+ .+...+
T Consensus 135 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~-----------~~-~~~~~~ 202 (391)
T 1l0q_A 135 NGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID-----------TV-KVEAAP 202 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-----------EE-ECSSEE
T ss_pred CCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE-----------EE-ecCCCc
Confidence 88999999999999999888878888999999999988 567789999999998754322 12 345678
Q ss_pred EEEEEccCCCEEEEEe---CCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867 283 TSLSCSITGITLLSSS---ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 283 ~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 338 (343)
.+++|+|++++|++++ .++.|++||+.+++.+..+.....+.+++|+|++++|+++
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE
Confidence 9999999999998887 6899999999999999888855668999999999988544
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.7e-32 Score=237.56 Aligned_cols=307 Identities=9% Similarity=0.016 Sum_probs=237.2
Q ss_pred ccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeC--CCcccceecccCCcc
Q psy10867 3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPV--NSQEKAQLRLICPGR 80 (343)
Q Consensus 3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~--~~~~~~~~~~~~~~~ 80 (343)
+-..+.++...++.|.+||..+++++.++..+. .+..++|+|+|+++++++.++.|.+||+ .+++.+..+. +...
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~ 223 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIE 223 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCC
Confidence 334577788889999999999999999998554 4789999999999888888899999999 7777766554 4556
Q ss_pred eEEEEECC----CCCEEEEe--cCCeEEEEEccCCceEEEecc----------cCC-CeEEEEEecCCC-EEEEecCCCe
Q psy10867 81 ISSMQASP----DAAYIAVS--IETKLHMWQISSGRLLATASS----------HYQ-PITIVKWSADSN-FIVTGGEDGT 142 (343)
Q Consensus 81 v~~~~~s~----~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~-~l~s~~~dg~ 142 (343)
+..++|+| ||++|+++ .+++|.+||..+++++..+.. |.. .+..+.++|++. ++++...++.
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~ 303 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 303 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe
Confidence 89999999 99998874 489999999999999888764 223 788999999765 5667778999
Q ss_pred EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCCeEEEEecCCCceEE
Q psy10867 143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDRTCKIFDLCTGEDLL 221 (343)
Q Consensus 143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~ 221 (343)
|.+||..+..... +..+ .+...+..+.|+|++ ++++ ++..+++|.+||..+++.+.
T Consensus 304 i~vvd~~~~~~l~--------------------~~~i-~~~~~~~~~~~spdg--~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 304 VLLVNYKDIDNLT--------------------VTSI-GAAPFLHDGGWDSSH--RYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp EEEEECTTSSSCE--------------------EEEE-ECCSSCCCEEECTTS--CEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEEEEecCCCcce--------------------eEEe-ccCcCccCceECCCC--CEEEEEecCCCeEEEEECCCCeEEE
Confidence 9999998754322 1111 245668889999999 5554 55568999999999999888
Q ss_pred Eee-----cCCcEEEEEEcCC-CCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEE
Q psy10867 222 SLI-----LDTRLTCVAFDGT-EDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL 294 (343)
Q Consensus 222 ~~~-----~~~~i~~~~~~~~-~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 294 (343)
.+. |......+ ++|+ +..++++. .|++|.+||+.+..... ...+.+..+.+|...+..++++|++++|
T Consensus 361 ~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~----~~~~~v~~l~~~g~~~~~v~~~pdg~~l 435 (543)
T 1nir_A 361 LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ----YAWKKVAELQGQGGGSLFIKTHPKSSHL 435 (543)
T ss_dssp EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT----TBTSEEEEEECSCSCCCCEECCTTCCEE
T ss_pred eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch----hcCeEEEEEEcCCCCceEEEcCCCCCcE
Confidence 776 22233333 5777 55556654 58999999998732110 0123366778888888999999999999
Q ss_pred EEEe-------CCCcEEEEecccceee-eec---------ccCCceEEEEEccCCCeeeeccc
Q psy10867 295 LSSS-------ADETLKIWHTISRQCL-RTI---------QHKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 295 ~s~~-------~dg~i~iwd~~~~~~~-~~~---------~~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
++++ .+++|.+||+.+++.. ..+ ++...+..+.|+|+|+.|+++..
T Consensus 436 ~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 436 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred EEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEee
Confidence 9987 2679999999998876 443 24678999999999999997643
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.5e-32 Score=246.22 Aligned_cols=302 Identities=10% Similarity=0.063 Sum_probs=229.7
Q ss_pred ccceEEEecCC---------CC-----eEEEEecCCceEEEEEecCCC-----------------------CcceEEEEe
Q psy10867 3 LLNEVAFSYDG---------SG-----AISVWEPKGGTLLMSYKGASV-----------------------LSPHSMCLL 45 (343)
Q Consensus 3 ~v~~~~~s~~~---------dg-----~i~iwd~~~~~~~~~~~~~~~-----------------------~~v~~~~~~ 45 (343)
.+..+.||+++ |+ .|++||+.+++....+..+.. ..+.+++|+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 35667777776 46 899999999988777765533 038899999
Q ss_pred CCceEEEEEcCCCeEEEEeCCCcc--cceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCC--
Q psy10867 46 GNDYVLGVEKGKPMIQAWPVNSQE--KAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQP-- 121 (343)
Q Consensus 46 ~~~~~~~~~~~~~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~-- 121 (343)
|||+.++.+.. +.|.+||+.++. ....+..+...+..++|+|||++|+.+.++.|++||+.+++.......+...
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 196 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIG 196 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSSEE
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCcccee
Confidence 99998888887 899999999882 3344556778899999999999999887889999999988776655444332
Q ss_pred --------------eEEEEEecCCCEEEEecCCC---------------------------------eEEEeecCc-cce
Q psy10867 122 --------------ITIVKWSADSNFIVTGGEDG---------------------------------TICVWQLSR-LIC 153 (343)
Q Consensus 122 --------------v~~~~~~~~~~~l~s~~~dg---------------------------------~i~iwd~~~-~~~ 153 (343)
+..+.|+|||++|++++.|+ .|.+||+.+ ++.
T Consensus 197 ~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 276 (741)
T 2ecf_A 197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT 276 (741)
T ss_dssp ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC
T ss_pred ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce
Confidence 47799999999999987665 788888876 542
Q ss_pred eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-----CCeEEEEecCCCceEEEeecCC-
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-----DRTCKIFDLCTGEDLLSLILDT- 227 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~- 227 (343)
... .....|...+..++| |++ +.|+.++. +..|++||+.+++....+....
T Consensus 277 ~~~--------------------~~~~~~~~~~~~~~~-pDg--~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 333 (741)
T 2ecf_A 277 QWI--------------------DLGKEQDIYLARVNW-RDP--QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP 333 (741)
T ss_dssp EEE--------------------CCCSCSSEEEEEEEE-EET--TEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred EEe--------------------cCCCCcceEEEEEEe-CCC--CEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC
Confidence 211 111247778999999 999 67775543 6789999999998776665322
Q ss_pred ----cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEE-EEccCCCEEE-EEeCCC
Q psy10867 228 ----RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL-SCSITGITLL-SSSADE 301 (343)
Q Consensus 228 ----~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~-s~~~dg 301 (343)
.+..++|+|+|+++++++.+|.+++|.+..... ...+..|...+..+ .|+|+++.|+ +++.++
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-----------~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-----------AAALTHGNWSVDELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-----------EEESCCSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-----------eeeeeecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence 356899999999999999999888887763211 22345567778887 5999998775 455555
Q ss_pred --cEEEEeccc-ceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 302 --TLKIWHTIS-RQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 302 --~i~iwd~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
.+++|++.. +.....+.....+..++|+|||++|+...
T Consensus 403 ~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~ 443 (741)
T 2ecf_A 403 ARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSW 443 (741)
T ss_dssp TTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEe
Confidence 899999874 66566676667789999999999988654
No 128
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=100.00 E-value=2.7e-30 Score=211.66 Aligned_cols=304 Identities=8% Similarity=-0.046 Sum_probs=213.4
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCccc-ceecccCCcceE
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEK-AQLRLICPGRIS 82 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~-~~~~~~~~~~v~ 82 (343)
..+.++...++.|.+||..+++.+..+..+.. .+ .++|+|+++ +++++..++.|.+||..+++. ......+..+..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYD-FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCC-EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCC-cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 34566777789999999999999888887766 66 999999997 555556578999999999887 555555565655
Q ss_pred EEEECCCCCEEEEecCC----eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCCCe-EEEeecCccceeee
Q psy10867 83 SMQASPDAAYIAVSIET----KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GEDGT-ICVWQLSRLICKQT 156 (343)
Q Consensus 83 ~~~~s~~~~~l~~~~d~----~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~-i~iwd~~~~~~~~~ 156 (343)
+++|+|++++++++.++ .|.+||+.+++.+..+..+ ....+++|+|++++++++ ..++. |.+|++........
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 59999999988875443 9999999999888877654 456899999999865554 55577 99999986432211
Q ss_pred eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce---EEEeecCCcEEEEE
Q psy10867 157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED---LLSLILDTRLTCVA 233 (343)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~i~~~~ 233 (343)
. . .........+..++|+|+++ .+++++..++.|++||+.+++. +..+.....+..++
T Consensus 167 ~-----------------~-~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 227 (331)
T 3u4y_A 167 T-----------------G-QEFISGGTRPFNITFTPDGN-FAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIV 227 (331)
T ss_dssp E-----------------E-EEEECSSSSEEEEEECTTSS-EEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEE
T ss_pred c-----------------C-CccccCCCCccceEECCCCC-EEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEE
Confidence 1 1 11113445678999999993 2455566789999999999998 77777778889999
Q ss_pred EcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecccc
Q psy10867 234 FDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTISR 311 (343)
Q Consensus 234 ~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~ 311 (343)
|+|++++++++. .++.|.+||+.+............ +............++|+||+++|++++ .++.|.+||+...
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHG--LLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECC--CCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccc--cccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 999999887765 477899999876543111100000 000011112235689999999886555 4669999999765
Q ss_pred eeeeecccCCceEEEEEccCC
Q psy10867 312 QCLRTIQHKGPVLGAFLGLLP 332 (343)
Q Consensus 312 ~~~~~~~~~~~v~~~~~sp~~ 332 (343)
..-........-....++|++
T Consensus 306 ~~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 306 VVGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp EEEECTTCCCBSCEEECCCC-
T ss_pred cccceecccccCCeEEECCcc
Confidence 433222232222334555554
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4.3e-31 Score=209.06 Aligned_cols=285 Identities=11% Similarity=0.030 Sum_probs=192.9
Q ss_pred CceEEEEEecCCC---CcceEEEEeCCc---eEEEEEcCCCeEEEEeCCCc---ccceecccCCcceEEEEECCCCCEEE
Q psy10867 24 GGTLLMSYKGASV---LSPHSMCLLGND---YVLGVEKGKPMIQAWPVNSQ---EKAQLRLICPGRISSMQASPDAAYIA 94 (343)
Q Consensus 24 ~~~~~~~~~~~~~---~~v~~~~~~~~~---~~~~~~~~~~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~ 94 (343)
+-+.+.+++...+ ..+.++-|-..+ ..++++.. ..|++|+..++ +.++....|+.+|..+.+.||..-|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 102 (356)
T 2w18_A 24 NLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLV 102 (356)
T ss_dssp CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCE
T ss_pred eeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCccccee
Confidence 3456667776653 123444444333 35666666 79999999988 77788889999999999999764443
Q ss_pred E---ecC--CeEEEEEccCC----ceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCc-cceeeeeecCCC
Q psy10867 95 V---SIE--TKLHMWQISSG----RLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSR-LICKQTVAFGIP 162 (343)
Q Consensus 95 ~---~~d--~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~-~~~~~~~~~~~~ 162 (343)
+ |.= +.|+..-+... .......+|...|..+ ++++++.+++ .|+.|++|++.. ++
T Consensus 103 ~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~---------- 169 (356)
T 2w18_A 103 CVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGG---------- 169 (356)
T ss_dssp EEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSC----------
T ss_pred eeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCc----------
Confidence 3 221 12222211111 2222223455445443 5676666644 689999999954 32
Q ss_pred CCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEee-cC---CcEEEEEEcCC
Q psy10867 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LD---TRLTCVAFDGT 237 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~---~~i~~~~~~~~ 237 (343)
.+..+..|...++.++|+| +|.+.+|++++.|++|++||+++++.+.++. ++ ..+.+++|+|+
T Consensus 170 ------------~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpd 237 (356)
T 2w18_A 170 ------------GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEM 237 (356)
T ss_dssp ------------EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEET
T ss_pred ------------eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCC
Confidence 4445567999999999999 3333899999999999999999999999987 32 35778899999
Q ss_pred CCEE------------EEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867 238 EDNI------------YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI 305 (343)
Q Consensus 238 ~~~l------------~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 305 (343)
++++ ++|+.|++|++||..+......... ....+|...+.+..+ ++.++|+++.|++|+|
T Consensus 238 G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~------~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkI 309 (356)
T 2w18_A 238 GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY------CLPPGQAGRFLEGDV--KDHCAAAILTSGTIAI 309 (356)
T ss_dssp TEEEEEEC------------CCEEEEEEETTTTEEEEEEEE------CCCTTCCCCEEEEEE--ETTEEEEEETTSCEEE
T ss_pred CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe------eccCCCcceeEcccc--CCCEEEEEcCCCcEEE
Confidence 9887 5577899999999887543321100 001355555444444 3789999999999999
Q ss_pred Eecccceeeeecc-cCCceE-EEEEccCCCeeeecccCC
Q psy10867 306 WHTISRQCLRTIQ-HKGPVL-GAFLGLLPPAIHDYDFTP 342 (343)
Q Consensus 306 wd~~~~~~~~~~~-~~~~v~-~~~~sp~~~~l~~~~~~~ 342 (343)
||+.+++++.++. |...+. .++|+|||++|++++...
T Consensus 310 WDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 310 WDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 9999999999998 766555 689999999999998653
No 130
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-31 Score=217.49 Aligned_cols=222 Identities=11% Similarity=0.092 Sum_probs=177.0
Q ss_pred EEecCCCCeEEEEecC---------CceEEEEEe-cCCCCcceEEEEeC--CceEEEEEcCCCeEEEEeCCCcccceecc
Q psy10867 8 AFSYDGSGAISVWEPK---------GGTLLMSYK-GASVLSPHSMCLLG--NDYVLGVEKGKPMIQAWPVNSQEKAQLRL 75 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~---------~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~iw~~~~~~~~~~~~ 75 (343)
+++++.|+.|++|+.. +++.+..+. .|.. .|.+++|+| ++.++++++.||.|++||+.+++......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~ 166 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN-EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS 166 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS-CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC-CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 6788999999999665 555555555 5666 899999999 99999999999999999999988765543
Q ss_pred -cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceE-EEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867 76 -ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLL-ATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 76 -~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
.+...|.+++|+|++.+|++ +.|+.|++||+++++.+ ..+.. |.++|.+++|+|++.+|++++. +.|++||+++.
T Consensus 167 ~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~ 245 (343)
T 3lrv_A 167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKD 245 (343)
T ss_dssp CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSS
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCC
Confidence 45668999999999999997 68999999999999887 78887 9999999999999999999994 59999999987
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccce--EEEEeecCCCceEEEEeeC-CCeEEEEecCCCceEEEeecCCc
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV--THVTLSKLGAKSRVASVSH-DRTCKIFDLCTGEDLLSLILDTR 228 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~ 228 (343)
.....+ ..+..|...+ .+++|+|++ .+|++++. |+.+++|++.+....... .+
T Consensus 246 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~g--~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~ 301 (343)
T 3lrv_A 246 VGTLAY-------------------PTYTIPEFKTGTVTYDIDDSG--KNMIAYSNESNSLTIYKFDKKTKNWTK---DE 301 (343)
T ss_dssp TTCBSS-------------------CCCBC-----CCEEEEECTTS--SEEEEEETTTTEEEEEEECTTTCSEEE---EE
T ss_pred Ccceee-------------------cccccccccccceEEEECCCC--CEEEEecCCCCcEEEEEEcccccceEe---cC
Confidence 543322 1112233333 469999999 79999888 999999999776554443 56
Q ss_pred EEEEEEcC---CCCEEEEEcCCCcEEEEEe
Q psy10867 229 LTCVAFDG---TEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 229 i~~~~~~~---~~~~l~~~~~d~~i~i~d~ 255 (343)
+..++|.| +.+.+++++.|+.+.++-.
T Consensus 302 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 302 ESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred ceeEecCccccccceeEEEecCCceEEEEe
Confidence 78888998 8899999999999988753
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=1.5e-31 Score=225.17 Aligned_cols=264 Identities=11% Similarity=-0.005 Sum_probs=200.3
Q ss_pred cceEEEEeCCc-eEEEEEc----CCC----eEEEEeC--CCcccc--eecccCCcceEEEEECC--------------CC
Q psy10867 38 SPHSMCLLGND-YVLGVEK----GKP----MIQAWPV--NSQEKA--QLRLICPGRISSMQASP--------------DA 90 (343)
Q Consensus 38 ~v~~~~~~~~~-~~~~~~~----~~~----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~s~--------------~~ 90 (343)
.+...+|.+.+ .++++|. .+| .++|||+ .+++.+ ..+..|...+..+++++ .+
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 55666777776 4555553 457 8999999 888766 44667777777777664 14
Q ss_pred CEEE-EecC------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC---eEEEeecCccceeeeeecC
Q psy10867 91 AYIA-VSIE------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG---TICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 91 ~~l~-~~~d------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~ 160 (343)
..++ ++.+ +.|++||+.. .....+.+|...+.+++|+|+++.|++++.++ .|++||+.+++.
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~------- 215 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV------- 215 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-------
T ss_pred CEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-------
Confidence 4444 4443 7999999974 44567778999999999999999999999875 999999988632
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCCe--EEEEecCCCceEEEeecCCcEEEEEEcCC
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDRT--CKIFDLCTGEDLLSLILDTRLTCVAFDGT 237 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~~~~~i~~~~~~~~ 237 (343)
..+..|...+.+++|+|++ +.|+ +++.++. |++||+++++......+...+.+++|+|+
T Consensus 216 ----------------~~l~~~~~~~~~~~~spdg--~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spd 277 (415)
T 2hqs_A 216 ----------------RQVASFPRHNGAPAFSPDG--SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPD 277 (415)
T ss_dssp ----------------EEEECCSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTT
T ss_pred ----------------EEeecCCCcccCEEEcCCC--CEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCC
Confidence 2345677889999999999 6566 6666554 99999998877544446778999999999
Q ss_pred CCEEEEEcC-CC--cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC---CcEEEEecccc
Q psy10867 238 EDNIYMGTS-EG--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD---ETLKIWHTISR 311 (343)
Q Consensus 238 ~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~ 311 (343)
|++|++++. ++ .|++||+..... ..+..+...+.+++|+|+|++|++++.+ ..|++||+.++
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~~~~------------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNINGGAP------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCC------------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred CCEEEEEECCCCCcEEEEEECCCCCE------------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 999988776 45 577777765431 2234456788999999999999988764 58999999988
Q ss_pred eeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867 312 QCLRTIQHKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 312 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
+.. .+.....+.+++|+|||++|++++.
T Consensus 346 ~~~-~l~~~~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 346 GVQ-VLSSTFLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp CEE-ECCCSSSCEEEEECTTSSEEEEEEE
T ss_pred CEE-EecCCCCcCCeEEcCCCCEEEEEEc
Confidence 774 3442238999999999999987753
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=7.1e-31 Score=237.09 Aligned_cols=301 Identities=10% Similarity=0.062 Sum_probs=210.7
Q ss_pred CCCeEEEEecCCceEEEEEecCCC--CcceEEEEeCCceEEEEEcCC---------CeEEEEeCCCccccee--cccCCc
Q psy10867 13 GSGAISVWEPKGGTLLMSYKGASV--LSPHSMCLLGNDYVLGVEKGK---------PMIQAWPVNSQEKAQL--RLICPG 79 (343)
Q Consensus 13 ~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~---------~~i~iw~~~~~~~~~~--~~~~~~ 79 (343)
.||.|++||+.+++....+..|.. ..|.+++|+|||+.++.+..+ +.+.+||+.+++.... ...+..
T Consensus 35 ~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 114 (723)
T 1xfd_A 35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNA 114 (723)
T ss_dssp SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSC
T ss_pred CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccc
Confidence 478999999999998888887764 138999999999988887653 6888999998876322 224445
Q ss_pred ceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCe------------------EEEEEecCCCEEEEecCCC
Q psy10867 80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI------------------TIVKWSADSNFIVTGGEDG 141 (343)
Q Consensus 80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~s~~~dg 141 (343)
.+..++|||||+.||.+.++.|++||+.+++.......+...+ .+++|+|||+.|++++.|+
T Consensus 115 ~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp CCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred cccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 5889999999999998777999999999988776665544433 7899999999999887543
Q ss_pred ----------------------------------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867 142 ----------------------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187 (343)
Q Consensus 142 ----------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 187 (343)
.|++||+.++.....+. .......+...+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~----------------~~~~~~~~~~~~~ 258 (723)
T 1xfd_A 195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM----------------PPDDPRMREYYIT 258 (723)
T ss_dssp TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC----------------CCCCGGGSSEEEE
T ss_pred CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee----------------CCccCCCccceeE
Confidence 67777776653222111 0001112366789
Q ss_pred EEEeecCCCceEEEEeeC----CCeEEEEecCCCceEEEee--cCCcE----EEEEEcCCCCEEEE--EcCCC------c
Q psy10867 188 HVTLSKLGAKSRVASVSH----DRTCKIFDLCTGEDLLSLI--LDTRL----TCVAFDGTEDNIYM--GTSEG------V 249 (343)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~--~~~~i----~~~~~~~~~~~l~~--~~~d~------~ 249 (343)
.++|+|++ +++++.+. +..|++||+.+++....+. +...+ ..++|+|+|+.|+. +..++ .
T Consensus 259 ~~~~SpDg--~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 336 (723)
T 1xfd_A 259 MVKWATST--KVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH 336 (723)
T ss_dssp EEEESSSS--EEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE
T ss_pred EEEEeCCC--eEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE
Confidence 99999999 77766543 3689999999988766543 22333 37899999997775 44566 4
Q ss_pred EEEEEe-ecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEEEEeCC---CcEEEEecccc--eeeeecc----
Q psy10867 250 IKSFCL-RQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLLSSSAD---ETLKIWHTISR--QCLRTIQ---- 318 (343)
Q Consensus 250 i~i~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~i~iwd~~~~--~~~~~~~---- 318 (343)
|++||+ ...... +...+..+...+.. ++|+|||+.|+..+.+ +.+++|++... .....+.
T Consensus 337 l~~~d~~~~~~~~---------~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~ 407 (723)
T 1xfd_A 337 ITVSSSQPNSSND---------NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLV 407 (723)
T ss_dssp EEEECSSCCSSSC---------CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSS
T ss_pred EEEEeccCCCCcc---------ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceeccccc
Confidence 556662 222100 01122223334444 6999999998766555 78999998643 2333343
Q ss_pred cCCceEEEEEccCCCeeeeccc
Q psy10867 319 HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 319 ~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
+...+..++|+|||++|+...-
T Consensus 408 ~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 408 ENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp SSCCCCEEEECTTSSEEEEECC
T ss_pred CCCCeEEEEECCCCCEEEEEcc
Confidence 4567899999999999887543
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=7.8e-31 Score=236.14 Aligned_cols=292 Identities=14% Similarity=0.098 Sum_probs=211.0
Q ss_pred EecCCCCeEEEEecCCceEE-EEEecCC-----------------CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc
Q psy10867 9 FSYDGSGAISVWEPKGGTLL-MSYKGAS-----------------VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK 70 (343)
Q Consensus 9 ~s~~~dg~i~iwd~~~~~~~-~~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~ 70 (343)
++.++++ | +||+.+++.+ ..+..+. . .|.+++|+||+.++++ .+ +.+++||+.+++.
T Consensus 39 ~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~-~v~~~~~spd~~~~~~-~~-~~i~~~d~~~~~~ 113 (706)
T 2z3z_A 39 VFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAF-PSFRTLDAGRGLVVLF-TQ-GGLVGFDMLARKV 113 (706)
T ss_dssp EEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------C-CCEEEEETTTTEEEEE-ET-TEEEEEETTTTEE
T ss_pred EEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhcccccccc-CceeEEECCCCeEEEE-EC-CEEEEEECCCCce
Confidence 3444566 8 9999999873 4443332 3 6999999999555555 44 8999999998876
Q ss_pred ceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccC-----CceEEEecccCCC--------------eEEEEEecCC
Q psy10867 71 AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISS-----GRLLATASSHYQP--------------ITIVKWSADS 131 (343)
Q Consensus 71 ~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~ 131 (343)
... ..+...+..++|+|||++|+.+.++.|++|++.+ ++.......+... +.++.|+|||
T Consensus 114 ~~l-~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 114 TYL-FDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp EEE-ECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred EEc-cCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 543 3556778899999999999998899999999998 8776655544443 4789999999
Q ss_pred CEEEEec---------------------------------CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867 132 NFIVTGG---------------------------------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178 (343)
Q Consensus 132 ~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (343)
++|++++ .+..|.+||+.++.... +..
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~--------------------~~~ 252 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY--------------------LQT 252 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE--------------------CCC
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe--------------------ecc
Confidence 9999987 44679999998764321 111
Q ss_pred ecccccceEEEEeecCCCceEEEEeeCCC-----eEEEEecCCCceEEEee---cCC---cEEEEEEcC--CCCEEEEEc
Q psy10867 179 KSQHSLPVTHVTLSKLGAKSRVASVSHDR-----TCKIFDLCTGEDLLSLI---LDT---RLTCVAFDG--TEDNIYMGT 245 (343)
Q Consensus 179 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~---~~~---~i~~~~~~~--~~~~l~~~~ 245 (343)
...|...+..++|+|++ +.|++++.++ .|++||+.+++....+. ... .+..++|+| +|++++++.
T Consensus 253 ~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDE--NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CSCTTCEEEEEEECTTS--SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred CCCCceeEeeEEEECCC--CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence 12466789999999999 7888877665 89999999984433332 221 246789999 999999999
Q ss_pred CCCcEEEEEeecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEEEEeC-CC----cEEEEecccceeeeeccc
Q psy10867 246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLLSSSA-DE----TLKIWHTISRQCLRTIQH 319 (343)
Q Consensus 246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~ 319 (343)
.++.+++|++..... ....+..|...+.. ++|+|+++.|+.++. ++ .|+.||+.+++ ...+.+
T Consensus 331 ~~g~~~l~~~~~~~~----------~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~ 399 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGR----------LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTP 399 (706)
T ss_dssp TTSSCEEEEEETTSC----------EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCC
T ss_pred cCCccEEEEEECCCC----------EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccC
Confidence 999999998873211 12334556677776 799999987765544 44 56677776665 455567
Q ss_pred CCceEEEEEccCCCeeeecc
Q psy10867 320 KGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 320 ~~~v~~~~~sp~~~~l~~~~ 339 (343)
...+.+++|+|||++|+...
T Consensus 400 ~~~~~~~~~spdg~~l~~~~ 419 (706)
T 2z3z_A 400 ESGMHRTQLSPDGSAIIDIF 419 (706)
T ss_dssp SSSEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEe
Confidence 77899999999999988654
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.98 E-value=4.4e-29 Score=205.35 Aligned_cols=298 Identities=10% Similarity=0.133 Sum_probs=201.3
Q ss_pred eEEEec-CCCCeEEEEecC-Cc--eEEEEEecCCCCcceEEEEeCCceEEEEEcCC-CeEEEEeCC--Ccccc--eeccc
Q psy10867 6 EVAFSY-DGSGAISVWEPK-GG--TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-PMIQAWPVN--SQEKA--QLRLI 76 (343)
Q Consensus 6 ~~~~s~-~~dg~i~iwd~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~iw~~~--~~~~~--~~~~~ 76 (343)
..+|.+ +.++.|++||+. ++ +.+..+. +.. .+.+++|+|++++++++..+ +.|.+|++. +++.. .....
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD-VPG-QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS-CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCC-CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 344444 779999999985 34 3344443 455 88999999999866665554 899999987 44432 22322
Q ss_pred CCcceEEEEECCCCCEEEE-e-cCCeEEEEEcc---CCceEEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEeecCc
Q psy10867 77 CPGRISSMQASPDAAYIAV-S-IETKLHMWQIS---SGRLLATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQLSR 150 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~-~-~d~~i~v~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~ 150 (343)
...+..++|+|++++|++ + .++.|.+||+. ..+....+..+ ..+.+++|+|+++++++++ .++.|.+||+.+
T Consensus 83 -~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 83 -PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp -SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred -CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 337889999999997765 4 37899999994 33445555444 4588999999999888776 889999999987
Q ss_pred -cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE-EEeeCCCeEEEEecCC--Cce--EEEee
Q psy10867 151 -LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV-ASVSHDRTCKIFDLCT--GED--LLSLI 224 (343)
Q Consensus 151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~--~~~--~~~~~ 224 (343)
+...... ...........+..++|+|++ +++ +++..++.+.+||++. ++. .....
T Consensus 161 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~pdg--~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~ 221 (343)
T 1ri6_A 161 DGHLVAQD-----------------PAEVTTVEGAGPRHMVFHPNE--QYAYCVNELNSSVDVWELKDPHGNIECVQTLD 221 (343)
T ss_dssp TSCEEEEE-----------------EEEEECSTTCCEEEEEECTTS--SEEEEEETTTTEEEEEESSCTTSCCEEEEEEE
T ss_pred CCceeeec-----------------ccccccCCCCCcceEEECCCC--CEEEEEeCCCCEEEEEEecCCCCcEEEEeecc
Confidence 4321110 001111234578889999999 555 4555899999999953 433 22222
Q ss_pred -c------CCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867 225 -L------DTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS 296 (343)
Q Consensus 225 -~------~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 296 (343)
. ...+..++|+|++++|+++ ..++.|.+||+........ .+..+..+.. +..++|+|++++|++
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~-------~~~~~~~~~~-~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS-------KEGFQPTETQ-PRGFNVDHSGKYLIA 293 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE-------EEEEEECSSS-CCCEEECTTSSEEEE
T ss_pred ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE-------EeeeecCCCc-cceEEECCCCCEEEE
Confidence 1 2346789999999988754 5789999999973111100 0222333333 888999999998887
Q ss_pred Ee-CCCcEEEEecc--cce--eeeecccCCceEEEEEccCCCe
Q psy10867 297 SS-ADETLKIWHTI--SRQ--CLRTIQHKGPVLGAFLGLLPPA 334 (343)
Q Consensus 297 ~~-~dg~i~iwd~~--~~~--~~~~~~~~~~v~~~~~sp~~~~ 334 (343)
++ .++.|.+|++. +++ .+..+.......+++|.|+.+.
T Consensus 294 ~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 294 AGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp ECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred ecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 77 68999999554 554 3444444456788899887654
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.9e-29 Score=217.35 Aligned_cols=274 Identities=11% Similarity=0.036 Sum_probs=211.1
Q ss_pred EEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEc--cCCceEEEecccC
Q psy10867 43 CLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQI--SSGRLLATASSHY 119 (343)
Q Consensus 43 ~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~--~~~~~~~~~~~~~ 119 (343)
+++|++.+++++..+++|.+||..+++.+..+..+.. +..++|+|||++|++ +.++.|.+||+ .+++.+..+.. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 4889999999999999999999999998876653333 889999999999887 67899999999 88888888874 4
Q ss_pred CCeEEEEEec----CCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc-cceEEEEeec
Q psy10867 120 QPITIVKWSA----DSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS-LPVTHVTLSK 193 (343)
Q Consensus 120 ~~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~ 193 (343)
..+..++|+| +++++++++. +++|.+||..+.+....+..... .......|. ..+..+.++|
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~------------~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM------------TVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEE------------CSSSCCEESCCCEEEEEECS
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCc------------ccCccccccCCceEEEEECC
Confidence 5679999999 9999999884 89999999998876665431000 000000122 3788999999
Q ss_pred CCCceEEEEeeCCCeEEEEecCCCceEE--EeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCC
Q psy10867 194 LGAKSRVASVSHDRTCKIFDLCTGEDLL--SLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDST 270 (343)
Q Consensus 194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~ 270 (343)
+++ .++++...++.|.+||+.+.+.+. .+.+...+..+.|+|++++++++ ..+++|.+||+.+.+.......
T Consensus 290 ~~~-~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~---- 364 (543)
T 1nir_A 290 EHP-EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV---- 364 (543)
T ss_dssp SSS-EEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC----
T ss_pred CCC-EEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc----
Confidence 875 678888899999999998876554 55566778899999999987765 4589999999987654332210
Q ss_pred CCCccccccCcEEEEEEccC-CCEEEEEe-CCCcEEEEeccc-------ceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867 271 SNPDFIGHEKQVTSLSCSIT-GITLLSSS-ADETLKIWHTIS-------RQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 271 ~~~~~~~~~~~v~~~~~s~~-~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
....|.+....+ ++|+ +.+++++. .|++|.+||+.+ +++++++. +.+.+..++|+|++++|++.+
T Consensus 365 ---g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 365 ---GKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp ---SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred ---CCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 011254433333 4777 66667765 689999999998 89999998 777889999999999999875
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=1.2e-29 Score=204.19 Aligned_cols=252 Identities=13% Similarity=0.073 Sum_probs=193.0
Q ss_pred EcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccC-CceEEEeccc-CCCeEEEEEecCC
Q psy10867 54 EKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISS-GRLLATASSH-YQPITIVKWSADS 131 (343)
Q Consensus 54 ~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~ 131 (343)
+..++.|++||+.+++... +..|...|.+++|+|++++|+++.++.|++||+.+ ++.......+ ...+.+++|+|++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 3456899999999887654 44678899999999999999998899999999999 8877776665 3678899999999
Q ss_pred CEEEEec--CCCeEEEeec--CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCC
Q psy10867 132 NFIVTGG--EDGTICVWQL--SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHD 206 (343)
Q Consensus 132 ~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d 206 (343)
++|++++ .++...+|.+ .+.. ...+..+ ..+..++|+|++ +.++ +++.+
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-----------------------~~~~~~~-~~~~~~~~spdg--~~l~~~~~~~ 150 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-----------------------PRLMTKN-LPSYWHGWSPDG--KSFTYCGIRD 150 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-----------------------CEECCSS-SSEEEEEECTTS--SEEEEEEEET
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-----------------------eEEeecC-CCccceEECCCC--CEEEEEECCC
Confidence 9999988 3345555554 4331 1222222 348889999999 5555 78889
Q ss_pred CeEEEEecC--CCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867 207 RTCKIFDLC--TGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT 283 (343)
Q Consensus 207 ~~i~~wd~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 283 (343)
+.+++|+++ +++......+...+.+++|+|++++|++++ .++.+++|++..... ....+..|...+.
T Consensus 151 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~ 220 (297)
T 2ojh_A 151 QVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS----------SVERITDSAYGDW 220 (297)
T ss_dssp TEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS----------CEEECCCCSEEEE
T ss_pred CceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC----------CcEEEecCCcccC
Confidence 999999853 444433334677899999999999888765 589999999873221 1334556677899
Q ss_pred EEEEccCCCEEEEEeCC-----------CcEEEEecccceee--eecc-cCCceEEEEEccCCCeeeecccCC
Q psy10867 284 SLSCSITGITLLSSSAD-----------ETLKIWHTISRQCL--RTIQ-HKGPVLGAFLGLLPPAIHDYDFTP 342 (343)
Q Consensus 284 ~~~~s~~~~~l~s~~~d-----------g~i~iwd~~~~~~~--~~~~-~~~~v~~~~~sp~~~~l~~~~~~~ 342 (343)
.++|+|++++|++++.+ +.|++||+.+++.. ..+. +...+..++|+|++++|++++..+
T Consensus 221 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 221 FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99999999999988766 56999999887653 3333 678899999999999999887654
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=2.9e-28 Score=201.38 Aligned_cols=266 Identities=9% Similarity=0.013 Sum_probs=207.2
Q ss_pred cceEEEEeCCceEEEEEcC-------CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccC
Q psy10867 38 SPHSMCLLGNDYVLGVEKG-------KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISS 108 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~-------~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~ 108 (343)
.+..++|+|++..++++.. ++.|.+||..+++....... ...+..++|+|++++++. ..++.|.+||+.+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 6789999999866555542 46899999999887765543 345788999999986554 3468999999999
Q ss_pred CceEEEecccCCC---------eEEEEEecCCCEEEEec--CCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867 109 GRLLATASSHYQP---------ITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 109 ~~~~~~~~~~~~~---------v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~---------------------- 178 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT---------------------- 178 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE----------------------
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE----------------------
Confidence 9988877654322 68899999999877765 47899999998875433
Q ss_pred eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-----CCcEEEEEEcCCCCEEEEEcC-CCcEE
Q psy10867 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-----DTRLTCVAFDGTEDNIYMGTS-EGVIK 251 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~-d~~i~ 251 (343)
.+..+...+..++|+|++ +++++++.++.|.+||+.+++....+.. ...+..++|+|+++++++++. ++.|.
T Consensus 179 ~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 179 AIQNTGKMSTGLALDSEG--KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVL 256 (353)
T ss_dssp EECCCCTTCCCCEEETTT--TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred EecCCCCccceEEECCCC--CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence 233344557889999999 7888888899999999999998877763 335788999999998877665 59999
Q ss_pred EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEcc
Q psy10867 252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLGL 330 (343)
Q Consensus 252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 330 (343)
+||+.+.+..... .... ...++|+|++++++.++ .++.|.+||..+++.+..+.....+.+++|+|
T Consensus 257 ~~d~~~~~~~~~~-----------~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 323 (353)
T 3vgz_A 257 VVDTRNGNILAKV-----------AAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSA 323 (353)
T ss_dssp EEETTTCCEEEEE-----------ECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECT
T ss_pred EEECCCCcEEEEE-----------EcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcC
Confidence 9999775543322 1111 25689999999665554 68999999999999998888667889999999
Q ss_pred CCCeeeecccC
Q psy10867 331 LPPAIHDYDFT 341 (343)
Q Consensus 331 ~~~~l~~~~~~ 341 (343)
+|++|+++...
T Consensus 324 dg~~l~v~~~~ 334 (353)
T 3vgz_A 324 DGKTLYVSVKQ 334 (353)
T ss_dssp TSCEEEEEEEC
T ss_pred CCCEEEEEEcc
Confidence 99988876543
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=4.5e-29 Score=200.90 Aligned_cols=253 Identities=10% Similarity=0.014 Sum_probs=190.9
Q ss_pred CCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-cccceecccC-CcceEEEEECCC
Q psy10867 12 DGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-QEKAQLRLIC-PGRISSMQASPD 89 (343)
Q Consensus 12 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~-~~~v~~~~~s~~ 89 (343)
+.++.|++||+.+++... +..|.. .+.+++|+|++++++++.+ +.|.+||+.+ ++.......+ ...+.+++|+|+
T Consensus 19 ~~~~~i~~~d~~~~~~~~-~~~~~~-~v~~~~~spdg~~l~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRV-VWQTPE-LFEAPNWSPDGKYLLLNSE-GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCEEEEEEETTTTEEEE-EEEESS-CCEEEEECTTSSEEEEEET-TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CcceeEEEEeCCCCceee-eccCCc-ceEeeEECCCCCEEEEEcC-CeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 457999999999888764 445666 8999999999999888875 8999999998 7766655444 467899999999
Q ss_pred CCEEEEec-----CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEE-EecCCCeEEEeecCccceeeeeecCCCC
Q psy10867 90 AAYIAVSI-----ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIV-TGGEDGTICVWQLSRLICKQTVAFGIPG 163 (343)
Q Consensus 90 ~~~l~~~~-----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 163 (343)
+++|+++. ...|..+++.++.. ..+..+ ..+..++|+|+++.|+ +++.++.+++|+++....
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---------- 163 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---------- 163 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC----------
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC----------
Confidence 99998743 23555666555553 344433 3489999999999877 777899999998643211
Q ss_pred CCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecC-CCceEEEee-cCCcEEEEEEcCCCCE
Q psy10867 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLC-TGEDLLSLI-LDTRLTCVAFDGTEDN 240 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~-~~~~~~~~~-~~~~i~~~~~~~~~~~ 240 (343)
....+..+...+.+++|+|++ .+++.++ .++.+++|+++ .+.....+. +...+..++|+|++++
T Consensus 164 -----------~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 164 -----------VETRLTHGEGRNDGPDYSPDG--RWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp -----------CEEECCCSSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE
T ss_pred -----------cceEcccCCCccccceECCCC--CEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE
Confidence 234445677889999999999 6666554 58999999886 445555554 5567889999999999
Q ss_pred EEEEcCC-----------CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867 241 IYMGTSE-----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE 301 (343)
Q Consensus 241 l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 301 (343)
|++++.+ +.|++||+.+..... +..+.+|...+..++|+|++++|++++.+.
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET---------LFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE---------EEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCcee---------eeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9988765 569999987643221 223446778899999999999998887664
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.97 E-value=1.4e-28 Score=201.84 Aligned_cols=270 Identities=12% Similarity=0.042 Sum_probs=203.3
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCC-cceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecc-cC----C
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVL-SPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRL-IC----P 78 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~-~~----~ 78 (343)
.++++.+.++.|.+||+.+++.+..+...... .+..++|+|+++ +++++..++.|.+||+.+++.+..+. .+ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 46888899999999999999999888754421 268999999984 55666767899999999888765443 22 2
Q ss_pred cceEEEEECCCCCEEEEe-------------cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867 79 GRISSMQASPDAAYIAVS-------------IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV 145 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~-------------~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 145 (343)
..+..++|+|++++|+++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 257789999999888875 479999999999888777764 4457889999999988887 688999
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCC-----------------
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDR----------------- 207 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~----------------- 207 (343)
||+.+++....+... .+..+ +.|+|++ ..++..+ .++
T Consensus 159 ~d~~~~~~~~~~~~~--------------------~~~~~---~~~s~dg--~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQ--------------------SWEAE---TYAQPDV--LAVWNQHESSGVMATPFYTARKDIDPAD 213 (337)
T ss_dssp EETTTTEEEEEECST--------------------TTTTT---TBCCCBC--CCCCCCCTTTTEEEEEEEEEBTTSCTTS
T ss_pred EECCCCcEeeeeecc--------------------ccCCC---ceeCCCc--cEEeeeccCCCceeeeeecccccccccc
Confidence 999987654433210 00112 2567776 3333322 222
Q ss_pred ------eEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867 208 ------TCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278 (343)
Q Consensus 208 ------~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 278 (343)
.|.+||+.+++.. ... +...+..++|+|++++++++ ++.|++||+.+.+... .+. .
T Consensus 214 ~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~-----------~~~-~ 278 (337)
T 1pby_B 214 PTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIK-----------RVP-L 278 (337)
T ss_dssp GGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEE-----------EEE-C
T ss_pred ccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcc-----------eec-C
Confidence 5789999998875 322 45578899999999999988 7999999987654322 122 2
Q ss_pred cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
...+.+++|+|++++|++++.++.|++||+.+++.+..+.
T Consensus 279 ~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 3457889999999999988999999999999999888886
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=3.2e-29 Score=226.85 Aligned_cols=280 Identities=13% Similarity=-0.004 Sum_probs=201.7
Q ss_pred cceEEEEeCCceEEEEEcC-CC-----eEEEEeCCCcccceecccCC------------------------cceEEEEEC
Q psy10867 38 SPHSMCLLGNDYVLGVEKG-KP-----MIQAWPVNSQEKAQLRLICP------------------------GRISSMQAS 87 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~-~~-----~i~iw~~~~~~~~~~~~~~~------------------------~~v~~~~~s 87 (343)
.+.+++|+|||+.++.++. ++ .|.+||+.+++.......+. ..+..++|+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 6899999999988888776 67 89999999987665554332 237899999
Q ss_pred CCCCEEEEecCCeEEEEEccCCc--eEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867 88 PDAAYIAVSIETKLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 88 ~~~~~l~~~~d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
|||++|+.+.++.|++||+.++. ....+..|...+..++|+|||++|+.++. +.|++||+.++..........
T Consensus 118 pDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~---- 192 (741)
T 2ecf_A 118 PDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS---- 192 (741)
T ss_dssp TTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC----
T ss_pred CCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc----
Confidence 99999998777999999999883 34566778888999999999999998875 699999998864332111000
Q ss_pred CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC---------------------------------eEEEE
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR---------------------------------TCKIF 212 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~---------------------------------~i~~w 212 (343)
.....+. ...........+..++|+|++ ++|++++.|+ .|++|
T Consensus 193 ~~~~~g~--~~~v~~~~~~~~~~~~~SpDg--~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 193 TTIGNGI--AEFVADEEMDRHTGYWWAPDD--SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp SSEEESC--CCHHHHHHSCCCCSEEECTTS--SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cceeccc--cceeeeeccccccceEECCCC--CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 0000000 000000001225789999999 7888887665 88999
Q ss_pred ecCC-CceEEEe---ecCCcEEEEEEcCCCCEEEEEcC-----CCcEEEEEeecccccccccccCCCCCCccccccC---
Q psy10867 213 DLCT-GEDLLSL---ILDTRLTCVAFDGTEDNIYMGTS-----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK--- 280 (343)
Q Consensus 213 d~~~-~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~--- 280 (343)
|+.+ ++..... .+...+..++| |||++|+++.. +..|++||+.+..... .+..+..
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~-----------~~~~~~~~~~ 336 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV-----------LAHETSPTWV 336 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE-----------EEEEECSSCC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE-----------EEEcCCCCcC
Confidence 9988 7765443 24567899999 99999997654 5679999987654322 1222222
Q ss_pred -cEEEEEEccCCCEEEEEeCCCcEEEEecc-cceeeeecc-cCCceEEE-EEccCCCeeeecc
Q psy10867 281 -QVTSLSCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ-HKGPVLGA-FLGLLPPAIHDYD 339 (343)
Q Consensus 281 -~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~~~v~~~-~~sp~~~~l~~~~ 339 (343)
.+..++|+|||+++++++.||.++||.+. +++ ...+. +...+..+ .|+|+++.|+..+
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEE
Confidence 34678999999999999999988888765 445 66666 77778887 5999999886543
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=1.1e-28 Score=230.67 Aligned_cols=283 Identities=8% Similarity=0.011 Sum_probs=219.2
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-cccceecccCCcceEEEEECCCCCEE
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-QEKAQLRLICPGRISSMQASPDAAYI 93 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l 93 (343)
...++|....+.....+.+|.. .+.++.|+++ .+++++..++.+.||.+.. +.....+..|. .+..++|+|||+.|
T Consensus 183 ~~~~lw~~~~~~~~~~l~~~~~-~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~l 259 (1045)
T 1k32_A 183 TRGKIWIEVNSGAFKKIVDMST-HVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRI 259 (1045)
T ss_dssp TCCEEEEEEETTEEEEEECCSS-CCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCE
T ss_pred CcCCEEEECCCCCeEECcCCCC-cccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEE
Confidence 3455564333344555688888 9999999998 7777777778999997653 33333343444 46677999999999
Q ss_pred EEecCCeEEEEEccCCceEEEecc-----------cCCCeEEEEEe-cCCCEEEEecCCCeEEEeecCccceeeeeecCC
Q psy10867 94 AVSIETKLHMWQISSGRLLATASS-----------HYQPITIVKWS-ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 94 ~~~~d~~i~v~~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
+.+.++.|++|++.... +..+.. |...+.+++|+ |+|+.|++++ ++.+.+|++..+.
T Consensus 260 a~~~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--------- 328 (1045)
T 1k32_A 260 LFSKGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--------- 328 (1045)
T ss_dssp EEEETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---------
T ss_pred EEEeCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---------
Confidence 98889999999995444 345554 33468999999 9999999888 7899999998753
Q ss_pred CCCCCCccccccceeeeeccccc-ceEEEEeecCCCceEEEEeeCCCeEE-EEecCCCceEEEeecCCcEEEEEEcCCCC
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSL-PVTHVTLSKLGAKSRVASVSHDRTCK-IFDLCTGEDLLSLILDTRLTCVAFDGTED 239 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~d~~i~-~wd~~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (343)
...+..|.. .+..++|+ ++ +.++.++.++.+. +||+.+++......+...+..++|+|+|+
T Consensus 329 --------------~~~~~~~~~~~~~~~~~s-dg--~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 329 --------------VLKVPEPLRIRYVRRGGD-TK--VAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp --------------EEECSCCSCEEEEEECSS-SE--EEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSS
T ss_pred --------------eEEccCCCcceEEeeeEc-CC--CeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCC
Confidence 223445666 88999999 88 7888888888899 99998776544334557799999999999
Q ss_pred EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC----------cEEEEecc
Q psy10867 240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE----------TLKIWHTI 309 (343)
Q Consensus 240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------~i~iwd~~ 309 (343)
+|++++.++.|++||+.+... .....+|...+.+++|+|||++|++++.++ .|++||+.
T Consensus 392 ~la~~~~~~~v~~~d~~tg~~-----------~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETGKP-----------TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEEETTSEEEEEETTTCCE-----------EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred EEEEECCCCeEEEEECCCCce-----------EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 999999999999999976543 223346888899999999999999887654 89999999
Q ss_pred cceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867 310 SRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 310 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
+++ +..+. +...+..++|+|||++|+.++.
T Consensus 461 ~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 461 GRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 888 44454 7788999999999999987664
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=6.2e-27 Score=193.35 Aligned_cols=253 Identities=12% Similarity=0.100 Sum_probs=196.4
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecccCCc---------ceEE
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPG---------RISS 83 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~---------~v~~ 83 (343)
++.|.+||..+++.+..+.... .+..++|+|++. ++++...++.|.+||..+++.+..+..+.. .+..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred CccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence 4689999999999988887654 678999999986 666667679999999999887655543322 2788
Q ss_pred EEECCCCCEEEEe---cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecC
Q psy10867 84 MQASPDAAYIAVS---IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 84 ~~~s~~~~~l~~~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 160 (343)
++|+|++++++++ .++.|.+||+.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.+++....+..
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~- 224 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL- 224 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC-
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc-
Confidence 9999999977753 378999999999998888875666688999999999999999999999999998765543321
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE-eeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCC
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS-VSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTED 239 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (343)
...++...+..++|+|++ ++++. ...++.|.+||..+++.+..+....+ ..++|+|+++
T Consensus 225 -----------------~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~ 284 (353)
T 3vgz_A 225 -----------------LDDGKEHFFINISLDTAR--QRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARN 284 (353)
T ss_dssp -----------------CCSSSCCCEEEEEEETTT--TEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTT
T ss_pred -----------------CCCCCCcccceEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCC
Confidence 011245568889999998 54544 44569999999999998888875544 5699999999
Q ss_pred EEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867 240 NIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE 301 (343)
Q Consensus 240 ~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 301 (343)
+++++. .++.|.+||..+.+... .+. ....+.+++|+|+|++|+.+..++
T Consensus 285 ~l~v~~~~~~~v~~~d~~~~~~~~-----------~~~-~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 285 EAYVTHRQAGKVSVIDAKSYKVVK-----------TFD-TPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE-----------EEE-CCSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEEECCCCeEEEEECCCCeEEE-----------EEe-cCCCCCeEEEcCCCCEEEEEEccc
Confidence 776655 68999999987754432 222 234678999999999777766554
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=2.1e-27 Score=213.80 Aligned_cols=275 Identities=9% Similarity=0.080 Sum_probs=197.8
Q ss_pred ccceEEEecCC------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCC-----cccc
Q psy10867 3 LLNEVAFSYDG------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS-----QEKA 71 (343)
Q Consensus 3 ~v~~~~~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~-----~~~~ 71 (343)
.+..+.||+++ ++.|++||+.+++.... ..+.. .+.+++|+|||+.++.+.+ +.|.+|++.+ ++..
T Consensus 83 ~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~-~~~~~~~SpdG~~la~~~~-~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYL-FDTNE-ETASLDFSPVGDRVAYVRN-HNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCEEEEETTTTEEEEEETTEEEEEETTTTEEEEE-ECCTT-CCTTCEECTTSSEEEEEET-TEEEEEECBCTTSCCCCCE
T ss_pred CceeEEECCCCeEEEEECCEEEEEECCCCceEEc-cCCcc-cccCCcCCCCCCEEEEEEC-CeEEEEecCcccccCCCcE
Confidence 36667777764 58999999988876554 44555 7899999999988888765 8999999998 7765
Q ss_pred eecccCCcc--------------eEEEEECCCCCEEEEec----------------------------------CCeEEE
Q psy10867 72 QLRLICPGR--------------ISSMQASPDAAYIAVSI----------------------------------ETKLHM 103 (343)
Q Consensus 72 ~~~~~~~~~--------------v~~~~~s~~~~~l~~~~----------------------------------d~~i~v 103 (343)
.....+... +.+++|+|||++|+.+. +..|++
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 544433332 48899999999999742 357999
Q ss_pred EEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867 104 WQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL 176 (343)
Q Consensus 104 ~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (343)
||+.+++...... .|...+.+++|+||++.|++++.++ .|.+||+.++.....+. .
T Consensus 240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-----------------~ 302 (706)
T 2z3z_A 240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF-----------------V 302 (706)
T ss_dssp EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE-----------------E
T ss_pred EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE-----------------E
Confidence 9999887655442 4667899999999999999877665 89999998863222110 0
Q ss_pred eeecccccceEEEEeec--CCCceEEEEeeCCCeEEEEecC-CCceEEEee-cCCcEEE-EEEcCCCCEEEEEcC-CC--
Q psy10867 177 HVKSQHSLPVTHVTLSK--LGAKSRVASVSHDRTCKIFDLC-TGEDLLSLI-LDTRLTC-VAFDGTEDNIYMGTS-EG-- 248 (343)
Q Consensus 177 ~~~~~~~~~v~~~~~~~--~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~-~~~~i~~-~~~~~~~~~l~~~~~-d~-- 248 (343)
.........+..++|+| ++ +++++++.++.+++|+++ +++.+..+. +...+.. ++|+|+++.|+.++. ++
T Consensus 303 ~~~~~~~~~~~~~~~sp~~dg--~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 303 ETDKHYVEPLHPLTFLPGSNN--QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp EECSSCCCCCSCCEECTTCSS--EEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred ccCCCeECccCCceeecCCCC--EEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 00011112346789999 88 789999999999999876 566666665 4455766 799999998876554 44
Q ss_pred --cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC----CcEEEEecccce
Q psy10867 249 --VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD----ETLKIWHTISRQ 312 (343)
Q Consensus 249 --~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~ 312 (343)
.|+.||+.+.. ...+ .|...+.+++|+|||++++..+.+ +.|++||+.+++
T Consensus 381 ~~~l~~~d~~~~~------------~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 381 ERHFYCIDIKGGK------------TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CBEEEEEETTCCC------------CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eEEEEEEEcCCCC------------ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 45555554422 1112 256678999999999988866443 469999998876
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.96 E-value=2.3e-27 Score=221.64 Aligned_cols=303 Identities=10% Similarity=0.028 Sum_probs=225.3
Q ss_pred cceEEEecCC-------CCeEEEEecCCceEEEEEec-----------CCCCcceEEEEe-CCceEEEEEcCCCeEEEEe
Q psy10867 4 LNEVAFSYDG-------SGAISVWEPKGGTLLMSYKG-----------ASVLSPHSMCLL-GNDYVLGVEKGKPMIQAWP 64 (343)
Q Consensus 4 v~~~~~s~~~-------dg~i~iwd~~~~~~~~~~~~-----------~~~~~v~~~~~~-~~~~~~~~~~~~~~i~iw~ 64 (343)
+....|++++ ++.|++||+... .+..+.. |.. .+.+++|+ |||+.++.+.. +.+.+|+
T Consensus 247 ~~~~~~SpDG~~la~~~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~-~v~~~~~S~pdG~~la~~~~-~~i~~~~ 323 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSKGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIP-SKFAEDFSPLDGDLIAFVSR-GQAFIQD 323 (1045)
T ss_dssp SCEEEEEESSSCEEEEETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECG-GGGEEEEEECGGGCEEEEET-TEEEEEC
T ss_pred cceeeEcCCCCEEEEEeCCEEEEecCCce-EeeeeccCccccccccccccc-ccceeeecCCCCCEEEEEEc-CEEEEEc
Confidence 3455777776 588999998544 3445555 233 68999999 99988887775 8999999
Q ss_pred CCCcccceecccCCc-ceEEEEECCCCCEEEE-ecCCeEE-EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC
Q psy10867 65 VNSQEKAQLRLICPG-RISSMQASPDAAYIAV-SIETKLH-MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG 141 (343)
Q Consensus 65 ~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~-~~d~~i~-v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 141 (343)
..+++... +..+.. .+..++|+ ||+.|+. +.++.+. +|++.+++... +.+|...+..++|+||+++|++++.++
T Consensus 324 ~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~ 400 (1045)
T 1k32_A 324 VSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRF 400 (1045)
T ss_dssp TTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCC
Confidence 98876554 446666 89999999 9988886 5566888 89998776554 447888999999999999999999999
Q ss_pred eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC----------CeEEE
Q psy10867 142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD----------RTCKI 211 (343)
Q Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----------~~i~~ 211 (343)
.|++||+.+++. ......|...+..++|+|++ ++|++++.+ +.|++
T Consensus 401 ~v~~~d~~tg~~----------------------~~~~~~~~~~v~~~~~SpDG--~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 401 EIMTVDLETGKP----------------------TVIERSREAMITDFTISDNS--RFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp EEEEEETTTCCE----------------------EEEEECSSSCCCCEEECTTS--CEEEEEEEECSSTTCSCCEEEEEE
T ss_pred eEEEEECCCCce----------------------EEeccCCCCCccceEECCCC--CeEEEEecCccccccCCCCCeEEE
Confidence 999999988642 33334688889999999999 778777664 48999
Q ss_pred EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccc----------------------------
Q psy10867 212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD---------------------------- 263 (343)
Q Consensus 212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---------------------------- 263 (343)
||+.+++......+...+..++|+|+|++|++++.++...+|+.........
T Consensus 457 ~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1045)
T 1k32_A 457 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 536 (1045)
T ss_dssp EETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred EECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccc
Confidence 9999887433334667788999999999999998887777776442211000
Q ss_pred ---ccccC-CCCCCccccccCcEEEEEEccCCCEEEE-------------EeCCCcEEEEecccceeeeecccCCceEEE
Q psy10867 264 ---HHIQD-STSNPDFIGHEKQVTSLSCSITGITLLS-------------SSADETLKIWHTISRQCLRTIQHKGPVLGA 326 (343)
Q Consensus 264 ---~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s-------------~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~ 326 (343)
+.... ...+..+..|...+..++++||++++++ ......|++||+.+++..... ..+..+
T Consensus 537 ~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~~v~~~ 613 (1045)
T 1k32_A 537 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK---NNLTDL 613 (1045)
T ss_dssp CCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE---EEEEEE
T ss_pred cccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee---cCcceE
Confidence 00000 0012234456778999999999987775 123457888999887753322 568899
Q ss_pred EEccCCCeeeecc
Q psy10867 327 FLGLLPPAIHDYD 339 (343)
Q Consensus 327 ~~sp~~~~l~~~~ 339 (343)
+|||||++|++++
T Consensus 614 ~~S~DG~~l~~~~ 626 (1045)
T 1k32_A 614 RLSADRKTVMVRK 626 (1045)
T ss_dssp EECTTSCEEEEEE
T ss_pred EECCCCCEEEEEc
Confidence 9999999999865
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.96 E-value=2.7e-26 Score=189.17 Aligned_cols=274 Identities=12% Similarity=0.108 Sum_probs=185.8
Q ss_pred cCCCCeEEEEecC--CceEEE-EEecCCCCcceEEEEeCCceEEEEEcC--CCeEEEEeCCCcccc--eecccCCcceEE
Q psy10867 11 YDGSGAISVWEPK--GGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKG--KPMIQAWPVNSQEKA--QLRLICPGRISS 83 (343)
Q Consensus 11 ~~~dg~i~iwd~~--~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~i~iw~~~~~~~~--~~~~~~~~~v~~ 83 (343)
.+.++.|.+|++. +++... ....+.. .+..++|+|+|++++++.. ++.|.+|++.+++.. .....+...+..
T Consensus 12 ~~~~~~i~v~~~d~~tg~~~~~~~~~~~~-~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 12 KKTSQGIYQGTLDTTAKTLTNDGLLAATQ-NPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SSSCCEEEEEEEETTTTEEEEEEEEEECS-CCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCCCCEEEEEEcCCCCeEEEeeeeeccC-CcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 3446678777654 565543 2333445 7889999999996655542 589999999766532 333346677889
Q ss_pred EEECCCCCEEEE-e-cCCeEEEEEcc-CCc--eEEEecc---------cCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867 84 MQASPDAAYIAV-S-IETKLHMWQIS-SGR--LLATASS---------HYQPITIVKWSADSNFIVTGGEDGTICVWQLS 149 (343)
Q Consensus 84 ~~~s~~~~~l~~-~-~d~~i~v~~~~-~~~--~~~~~~~---------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 149 (343)
++|+|||++|++ + .++.|.+|++. ++. .+..+.. +...+.+++|+|+++++++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 999999998776 4 57899999996 333 2222221 12348899999999977777778999999998
Q ss_pred -ccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--Cce--EEEe
Q psy10867 150 -RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--GED--LLSL 223 (343)
Q Consensus 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~~~--~~~~ 223 (343)
++.... ..... .....+..++|+|+++ .++++...++.+.+|++.. ++. +..+
T Consensus 171 ~~g~~~~--------------------~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 229 (347)
T 3hfq_A 171 DAGQLSE--------------------QSVLTMEAGFGPRHLVFSPDGQ-YAFLAGELSSQIASLKYDTQTGAFTQLGIV 229 (347)
T ss_dssp TTSCEEE--------------------EEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred CCCcEEE--------------------eeeEEcCCCCCCceEEECCCCC-EEEEEeCCCCEEEEEEecCCCCceEEeeee
Confidence 332211 11111 1233577899999993 2445566789999999874 443 2222
Q ss_pred e-cC------CcEEEEEEcCCCCEEEE-EcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867 224 I-LD------TRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295 (343)
Q Consensus 224 ~-~~------~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 295 (343)
. .. ..+..++|+|+|++|++ ...++.|.+|++........ +..+..+...+..++|+|||++|+
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~--------~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTL--------IQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEE--------EEEEECSSSCCCEEEECTTSSEEE
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEE--------eEEEecCCCCcCeEEECCCCCEEE
Confidence 2 11 45889999999998865 45689999999974221111 233444556688999999999888
Q ss_pred EEeCC-CcEEEE--ecccceee
Q psy10867 296 SSSAD-ETLKIW--HTISRQCL 314 (343)
Q Consensus 296 s~~~d-g~i~iw--d~~~~~~~ 314 (343)
+++.+ +.|.+| |..+|+..
T Consensus 302 v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 302 VVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEETTTTEEEEEEECTTTCCEE
T ss_pred EEEcCCCcEEEEEEeCCCCeEE
Confidence 87764 899999 55566654
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=9.6e-27 Score=190.53 Aligned_cols=264 Identities=10% Similarity=0.029 Sum_probs=189.5
Q ss_pred EEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-e-cCCeEEEEEccCCce-EEEeccc
Q psy10867 43 CLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-S-IETKLHMWQISSGRL-LATASSH 118 (343)
Q Consensus 43 ~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~-~d~~i~v~~~~~~~~-~~~~~~~ 118 (343)
.|.+ .+.++++...++.|.+||..+++.......+...+ .++|+|+++++++ + .++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 3454 45667777777999999999998876665556666 9999999996665 4 378999999999987 7777767
Q ss_pred CCCeEEEEEecCCCEEEEecCCC---eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCC
Q psy10867 119 YQPITIVKWSADSNFIVTGGEDG---TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG 195 (343)
Q Consensus 119 ~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 195 (343)
..+..+++|+|++++++++..++ .|.+||+.+++....+ . ....+.+++|+|++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~----------------------~-~~~~~~~~~~spdg 139 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI----------------------P-IPYDAVGIAISPNG 139 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE----------------------E-CCTTEEEEEECTTS
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE----------------------E-CCCCccceEECCCC
Confidence 66666699999999999655553 8999999887544332 2 23456899999999
Q ss_pred CceEEEEeeCCCe-EEEEecCCCceE-----EEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccC
Q psy10867 196 AKSRVASVSHDRT-CKIFDLCTGEDL-----LSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQD 268 (343)
Q Consensus 196 ~~~~l~~~~~d~~-i~~wd~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~ 268 (343)
+ .++++...++. +.+|++.....+ ..+.....+..++|+|++++++++ ..++.|++||+.+......
T Consensus 140 ~-~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~----- 213 (331)
T 3u4y_A 140 N-GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL----- 213 (331)
T ss_dssp S-CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE-----
T ss_pred C-EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce-----
Confidence 3 35555566688 999998764433 222345668999999999976655 4689999999886543110
Q ss_pred CCCCCccccccCcEEEEEEccCCCEEEEE-eCCCcEEEEeccccee--eeecc-c----C---CceEEEEEccCCCeeee
Q psy10867 269 STSNPDFIGHEKQVTSLSCSITGITLLSS-SADETLKIWHTISRQC--LRTIQ-H----K---GPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~--~~~~~-~----~---~~v~~~~~sp~~~~l~~ 337 (343)
+..+. ....+..++|+|||++|+.+ ..++.|.+||+.+++. +..+. . . .....++|+||+++|++
T Consensus 214 ---~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 214 ---LNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp ---EEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred ---eeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence 11222 23567889999999977655 4578899999998877 33332 1 1 22356899999999876
Q ss_pred ccc
Q psy10867 338 YDF 340 (343)
Q Consensus 338 ~~~ 340 (343)
++.
T Consensus 290 ~~~ 292 (331)
T 3u4y_A 290 SAN 292 (331)
T ss_dssp EET
T ss_pred ecC
Confidence 643
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=9.7e-27 Score=191.37 Aligned_cols=266 Identities=12% Similarity=0.127 Sum_probs=182.8
Q ss_pred ceEEEEEcCCCeEEEEeCCC-cccc-eecccCCcceEEEEECCCCCEEEE-ecC-CeEEEEEcc--CCce--EEEecccC
Q psy10867 48 DYVLGVEKGKPMIQAWPVNS-QEKA-QLRLICPGRISSMQASPDAAYIAV-SIE-TKLHMWQIS--SGRL--LATASSHY 119 (343)
Q Consensus 48 ~~~~~~~~~~~~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~s~~~~~l~~-~~d-~~i~v~~~~--~~~~--~~~~~~~~ 119 (343)
..+++++..++.|++|++.. ++.. .....+...+..++|+|++++|++ +.+ +.|.+|++. +++. +..+..+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence 45556657679999999853 3221 222356778899999999997776 444 899999997 5553 34444443
Q ss_pred CCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867 120 QPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198 (343)
Q Consensus 120 ~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 198 (343)
.+..++|+|+++++++++ .++.|.+||+..+.... ...... ....+.+++|+|++ +
T Consensus 85 -~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~-------------------~~~~~~-~~~~~~~~~~s~dg--~ 141 (343)
T 1ri6_A 85 -SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG-------------------VVDVVE-GLDGCHSANISPDN--R 141 (343)
T ss_dssp -CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE-------------------EEEEEC-CCTTBCCCEECTTS--S
T ss_pred -CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccc-------------------cccccc-CCCCceEEEECCCC--C
Confidence 788999999999776665 48899999995221111 222222 33458899999999 6
Q ss_pred EEEEee-CCCeEEEEecCC-CceEE----Eee--cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCC
Q psy10867 199 RVASVS-HDRTCKIFDLCT-GEDLL----SLI--LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDS 269 (343)
Q Consensus 199 ~l~~~~-~d~~i~~wd~~~-~~~~~----~~~--~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~ 269 (343)
++++++ .++.|++||+.+ ++... ... ....+..++|+|++++++++ ..++.|.+|++..........
T Consensus 142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~---- 217 (343)
T 1ri6_A 142 TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV---- 217 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE----
T ss_pred EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE----
Confidence 666665 899999999987 65432 222 34578899999999977665 478999999996421110000
Q ss_pred CCCCccc---cccCcEEEEEEccCCCEEE-EEeCCCcEEEEecc----cceeeeecccCCceEEEEEccCCCeeeeccc
Q psy10867 270 TSNPDFI---GHEKQVTSLSCSITGITLL-SSSADETLKIWHTI----SRQCLRTIQHKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 270 ~~~~~~~---~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
.....+. .....+..++|+|++++|+ ++..++.|++||+. +.+.+..+.....+..++|+|++++|++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 218 QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred eeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecC
Confidence 0000011 1134577899999998877 45578999999998 3345555554445899999999999888763
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=3.5e-28 Score=219.50 Aligned_cols=273 Identities=12% Similarity=0.041 Sum_probs=191.4
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc---ceEEEEECCCCCEEEEec----------CCeEEEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG---RISSMQASPDAAYIAVSI----------ETKLHMW 104 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~----------d~~i~v~ 104 (343)
.+.+++|+|||+++++ +.||.|++||+.+++....+..|.. .|.+++|||||++|+.+. ++.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 5678999999998877 4569999999999987766655554 499999999999998743 2789999
Q ss_pred EccCCceEEEec---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867 105 QISSGRLLATAS---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ 181 (343)
Q Consensus 105 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
|+.+++. ..+. .|...+..++|+|||+.|+.++. +.|++||+.++........... . ..+.+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~------------~-~~~~g 161 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE------------G-VIYNG 161 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT------------T-TEEEE
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC------------C-ceECc
Confidence 9998876 3333 34455889999999999999886 7999999988654322110000 0 00001
Q ss_pred c---------ccceEEEEeecCCCceEEEEeeCCC----------------------------------eEEEEecCCCc
Q psy10867 182 H---------SLPVTHVTLSKLGAKSRVASVSHDR----------------------------------TCKIFDLCTGE 218 (343)
Q Consensus 182 ~---------~~~v~~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~ 218 (343)
+ ...+.+++|+|++ +.|++++.++ .|++||+.+++
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg--~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~ 239 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDG--TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT 239 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTS--SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC
T ss_pred ccceeEEEEeccCcceEEECCCC--CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc
Confidence 1 1134789999999 7888776543 79999999888
Q ss_pred eEEEeec-------CCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccc-cccCcE----
Q psy10867 219 DLLSLIL-------DTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFI-GHEKQV---- 282 (343)
Q Consensus 219 ~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~v---- 282 (343)
....+.. ...+..++|+|||+++++... +..|++||+.+..... .+. .+...+
T Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~-----------~~~~~~~~~~~~~~ 308 (723)
T 1xfd_A 240 HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK-----------KHEDESEAWLHRQN 308 (723)
T ss_dssp CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE-----------EEEEECSSCCCCCC
T ss_pred eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE-----------EEEeccCCEEeccC
Confidence 6555542 456899999999998877643 3579999987654321 111 122333
Q ss_pred EEEEEccCCCEEEE--EeCCC------cEEEEe-cccce--eeeecc-cCCceEE-EEEccCCCeeeecc
Q psy10867 283 TSLSCSITGITLLS--SSADE------TLKIWH-TISRQ--CLRTIQ-HKGPVLG-AFLGLLPPAIHDYD 339 (343)
Q Consensus 283 ~~~~~s~~~~~l~s--~~~dg------~i~iwd-~~~~~--~~~~~~-~~~~v~~-~~~sp~~~~l~~~~ 339 (343)
..++|+|||+.|+. +..++ .|++|| ..+++ +...+. ....+.. ++|+|||+.|+..+
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~ 378 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLS 378 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEE
Confidence 37899999997774 45666 577777 34444 145554 3445554 69999999997654
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=3.7e-27 Score=193.35 Aligned_cols=253 Identities=7% Similarity=0.009 Sum_probs=189.8
Q ss_pred eEEEEEcCCCeEEEEeCCCcccceecccCC-c-ceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecc-c----C
Q psy10867 49 YVLGVEKGKPMIQAWPVNSQEKAQLRLICP-G-RISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASS-H----Y 119 (343)
Q Consensus 49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~-~----~ 119 (343)
.+++++..++.|.+||..+++.+..+.... . .+..++|+|+++.++. ..++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 466777777999999999988775553222 1 5789999999986654 3568999999999988776653 2 1
Q ss_pred CCeEEEEEecCCCEEEEec------------CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867 120 QPITIVKWSADSNFIVTGG------------EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187 (343)
Q Consensus 120 ~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 187 (343)
..+..++|+|++++++++. .++.|.+||+.+++....+ . ....+.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~----------------------~-~~~~~~ 138 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF----------------------E-APRQIT 138 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE----------------------E-CCSSCC
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE----------------------e-CCCCcc
Confidence 2567899999999988886 5799999999886543322 1 234577
Q ss_pred EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC-------------------
Q psy10867 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG------------------- 248 (343)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~------------------- 248 (343)
.++|+|++ ++++++ ++.|++||+.+++....+........+.|+|+++.+++.+..+
T Consensus 139 ~~~~s~dg--~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 139 MLAWARDG--SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp CEEECTTS--SCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred eeEECCCC--CEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 89999999 666666 6889999999998887776433112347899998776654433
Q ss_pred -----cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce
Q psy10867 249 -----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV 323 (343)
Q Consensus 249 -----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v 323 (343)
.|.+||+.+.+.. . ..+..+...+.+++|+|++++++++ ++.|++||+.+++.+..+.....+
T Consensus 215 ~~~~~~v~~~d~~~~~~~-~---------~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~ 282 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMA-M---------REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSY 282 (337)
T ss_dssp GGEEEEEEEEETTTCCEE-E---------EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred cccccceEEEeCCCCCce-E---------eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCce
Confidence 3578887764332 1 1234455678899999999999888 789999999999988888766678
Q ss_pred EEEEEccCCCeeeeccc
Q psy10867 324 LGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 324 ~~~~~sp~~~~l~~~~~ 340 (343)
.+++|+|++++|++++.
T Consensus 283 ~~~~~s~dg~~l~~~~~ 299 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGA 299 (337)
T ss_dssp CEEEECTTSCEEEEESB
T ss_pred eeEEECCCCCEEEEEcC
Confidence 99999999999888754
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.96 E-value=9.4e-25 Score=180.90 Aligned_cols=291 Identities=10% Similarity=0.066 Sum_probs=191.9
Q ss_pred cCCCCeEEEEec--CCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC----CeEEEEeCCC--cccc--eecccCCcc
Q psy10867 11 YDGSGAISVWEP--KGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK----PMIQAWPVNS--QEKA--QLRLICPGR 80 (343)
Q Consensus 11 ~~~dg~i~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~iw~~~~--~~~~--~~~~~~~~~ 80 (343)
.++++.|.+|++ .+++.......+.. .+..++|+|+++++++++.+ +.+.+|+++. ++.. .....+...
T Consensus 23 ~~~~~~i~~~~~d~~~g~~~~~~~~~~~-~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 23 SGNSKGIYTFRFNEETGESLPLSDAEVA-NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp SSSCCEEEEEEEETTTCCEEEEEEEECS-CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCCCCCEEEEEEeCCCCCEEEeecccCC-CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 345788999976 45654333222555 78899999999877776664 7999998765 3332 222234556
Q ss_pred eEEEEECCCCCEEEE-e-cCCeEEEEEccCCceEEEe------cc--------cCCCeEEEEEecCCCEEEEec-CCCeE
Q psy10867 81 ISSMQASPDAAYIAV-S-IETKLHMWQISSGRLLATA------SS--------HYQPITIVKWSADSNFIVTGG-EDGTI 143 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~-~d~~i~v~~~~~~~~~~~~------~~--------~~~~v~~~~~~~~~~~l~s~~-~dg~i 143 (343)
...+++ ++++|++ + .++.|.+|++.....+..+ .+ +...+.+++|+|+++++++++ .++.|
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 777888 7877765 3 5789999999754322211 11 123458899999999665554 58899
Q ss_pred EEeecCccce------eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCC
Q psy10867 144 CVWQLSRLIC------KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCT 216 (343)
Q Consensus 144 ~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~ 216 (343)
.+|++..... .... .........+...+..++|+|++ +++++++ .++.|.+||+.+
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~~~~~~~~~spdg--~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTK---------------GTPEAFKVAPGSGPRHLIFNSDG--KFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEE---------------EEEEEEECCTTCCEEEEEECTTS--SEEEEEETTTCEEEEEEEET
T ss_pred EEEEEcCCCCcccccceeec---------------ccccceecCCCCCCeEEEEcCCC--CEEEEEcCCCCeEEEEEecC
Confidence 9999876431 1000 00011222344567899999999 6666655 689999999987
Q ss_pred Cce--EEEee----cCCcEEEEEEcCCCCEEEEEcCC--CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867 217 GED--LLSLI----LDTRLTCVAFDGTEDNIYMGTSE--GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS 288 (343)
Q Consensus 217 ~~~--~~~~~----~~~~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 288 (343)
++. +..+. +......++|+|+|++|+++..+ +.|.+|++........ .+..+.. ...+..++|+
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~-------~~~~~~~-g~~~~~~~~s 314 (361)
T 3scy_A 243 GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT-------KVGYQLT-GIHPRNFIIT 314 (361)
T ss_dssp TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE-------EEEEEEC-SSCCCEEEEC
T ss_pred CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE-------EeeEecC-CCCCceEEEC
Confidence 754 22222 12347899999999999776654 8999999963211100 0122222 3467889999
Q ss_pred cCCCEEEEEe-CCCcEEEE--ecccceeeeecc--cCCceEEEEEc
Q psy10867 289 ITGITLLSSS-ADETLKIW--HTISRQCLRTIQ--HKGPVLGAFLG 329 (343)
Q Consensus 289 ~~~~~l~s~~-~dg~i~iw--d~~~~~~~~~~~--~~~~v~~~~~s 329 (343)
|||++|++++ .++.|.+| |..+++...... +...+.++.|.
T Consensus 315 pdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 315 PNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9999888877 67899996 555777655543 55678898886
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=6.8e-27 Score=205.84 Aligned_cols=255 Identities=10% Similarity=0.006 Sum_probs=185.6
Q ss_pred cceEEEEeCCceEEEEEcC-CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec----CCeEEEEEccC---C
Q psy10867 38 SPHSMCLLGNDYVLGVEKG-KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI----ETKLHMWQISS---G 109 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~-~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----d~~i~v~~~~~---~ 109 (343)
+|.+++|+|||+.++.++. +|+++||++++++..+....+...+..++|+|| ++++++. +....+|.+.. +
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence 8999999999987777654 799999999777655544344468999999999 7776543 34455655433 3
Q ss_pred ceEEEecccCCCeEEEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEE
Q psy10867 110 RLLATASSHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH 188 (343)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 188 (343)
... .+.... .+...+|+|+++. +++.+.++.+.+||+.+++... +..+.. .+
T Consensus 102 ~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-----------------------l~~~~~--~~ 154 (582)
T 3o4h_A 102 EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-----------------------LARLPG--FG 154 (582)
T ss_dssp CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-----------------------EEEESS--CE
T ss_pred ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-----------------------eecCCC--ce
Confidence 333 443322 3456788888863 3333444555699998764321 112222 78
Q ss_pred EEeecCCCceEEEEeeCC----CeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC--cEEEEEeecccccc
Q psy10867 189 VTLSKLGAKSRVASVSHD----RTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG--VIKSFCLRQVPRTR 262 (343)
Q Consensus 189 ~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~ 262 (343)
++|+|+| +++++++.+ +.|++||+.+++......+...+..++|+|||+.|+++..++ .|++||+.+....
T Consensus 155 ~~~spDG--~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~- 231 (582)
T 3o4h_A 155 FVSDIRG--DLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE- 231 (582)
T ss_dssp EEEEEET--TEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-
T ss_pred EEECCCC--CEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-
Confidence 9999999 788887777 789999999888765555677899999999999999888888 8999998764432
Q ss_pred cccccCCCCCCccccccCcEEEEE--------EccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCe
Q psy10867 263 DHHIQDSTSNPDFIGHEKQVTSLS--------CSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPA 334 (343)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~ 334 (343)
.+.+|...+..++ |+|||.++++++.|+.+++|++ |+.+. ...+.+.+++|+ +++.
T Consensus 232 -----------~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 232 -----------DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKL 295 (582)
T ss_dssp -----------ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEE
T ss_pred -----------EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEE
Confidence 2344555555555 9999988899999999999999 76655 344678999999 9988
Q ss_pred eeecc
Q psy10867 335 IHDYD 339 (343)
Q Consensus 335 l~~~~ 339 (343)
+++++
T Consensus 296 l~~~s 300 (582)
T 3o4h_A 296 VTSHT 300 (582)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 87654
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.4e-26 Score=208.87 Aligned_cols=296 Identities=10% Similarity=0.030 Sum_probs=204.2
Q ss_pred CCCeEEEEecCCceEEEEEecCCC--CcceEEEEeCCceEEEEEcC---------CCeEEEEeCCCcccceecccCCcce
Q psy10867 13 GSGAISVWEPKGGTLLMSYKGASV--LSPHSMCLLGNDYVLGVEKG---------KPMIQAWPVNSQEKAQLRLICPGRI 81 (343)
Q Consensus 13 ~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~---------~~~i~iw~~~~~~~~~~~~~~~~~v 81 (343)
.|+.|++||+.+++....+.++.. ..+.+++|||||+.++.++. ++.|++||+.+++.+... .....+
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~ 112 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPI 112 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSB
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCccc
Confidence 489999999999998877776542 13899999999988877654 589999999998763111 113568
Q ss_pred EEEEECCCCCEEEEecCCeEEEEEccCCceEEEe-cccCCCe-----------------EEEEEecCCCEEEEecCCC--
Q psy10867 82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATA-SSHYQPI-----------------TIVKWSADSNFIVTGGEDG-- 141 (343)
Q Consensus 82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg-- 141 (343)
..++|||||+.||.+.++.|++|++.+++..... .++...+ .+++|+|||+.|++++.|.
T Consensus 113 ~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~ 192 (719)
T 1z68_A 113 QYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD 192 (719)
T ss_dssp CCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred ccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence 8999999999999988999999999988776543 2333322 4899999999999987542
Q ss_pred --------------------------------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867 142 --------------------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189 (343)
Q Consensus 142 --------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 189 (343)
.|++||+.++.......+ .....+.+|...+..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV--------------PVPAMIASSDYYFSWL 258 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC--------------CCCHHHHTSCEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc--------------cCCccCCCCcceEEEe
Confidence 677888877643200000 0002234678889999
Q ss_pred EeecCCCceEEEEeeCC----CeEEEEe----cCCCceEEEe-----ecCCcEE-----EEEEcCCCCEEEE--EcCCCc
Q psy10867 190 TLSKLGAKSRVASVSHD----RTCKIFD----LCTGEDLLSL-----ILDTRLT-----CVAFDGTEDNIYM--GTSEGV 249 (343)
Q Consensus 190 ~~~~~~~~~~l~~~~~d----~~i~~wd----~~~~~~~~~~-----~~~~~i~-----~~~~~~~~~~l~~--~~~d~~ 249 (343)
+|+|++ +++++.... ..|.+|| ..+++....+ .+...+. .+.|+|+|+.++. +..+|.
T Consensus 259 ~~SpD~--~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~ 336 (719)
T 1z68_A 259 TWVTDE--RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGY 336 (719)
T ss_dssp EESSSS--EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSC
T ss_pred EEeCCC--eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCc
Confidence 999997 777764432 3588899 7777654433 2344455 7899999996654 445564
Q ss_pred --EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEeccc--ce-eeeecc-
Q psy10867 250 --IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTIS--RQ-CLRTIQ- 318 (343)
Q Consensus 250 --i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~--~~-~~~~~~- 318 (343)
|++||+.... ...+..+...+..+.++ +++.|+..+.+ +..++|.+.. +. ....+.
T Consensus 337 ~~l~~~~~~~~~------------~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~ 403 (719)
T 1z68_A 337 KHIHYIKDTVEN------------AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC 403 (719)
T ss_dssp EEEEEESSCSTT------------CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST
T ss_pred eEEEEEECCCCc------------eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC
Confidence 5555554422 12334455567777777 77777766554 8899998764 32 122332
Q ss_pred ----cCCceEEEEEccCCCeeeec
Q psy10867 319 ----HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 319 ----~~~~v~~~~~sp~~~~l~~~ 338 (343)
+...+..+.|+|++++++..
T Consensus 404 ~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 404 HLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp TTTTTTBCBEEEEECGGGSSEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEE
Confidence 44578899999999988754
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=6.4e-25 Score=180.95 Aligned_cols=293 Identities=11% Similarity=0.061 Sum_probs=190.8
Q ss_pred cceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceeccc-C----
Q psy10867 4 LNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLI-C---- 77 (343)
Q Consensus 4 v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~-~---- 77 (343)
-..+.++...++.|++||+.+++.+..+..+....+..++|+|+++ +++++..++.|.+||+.+++....... +
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 3467788888999999999999999888866522578999999986 455666679999999998877654432 2
Q ss_pred -CcceEEEEECCCCCEEEEec-------------CCeEEEEEccCCce---EEEecccCCCeEEEEEecCCCEEEEecCC
Q psy10867 78 -PGRISSMQASPDAAYIAVSI-------------ETKLHMWQISSGRL---LATASSHYQPITIVKWSADSNFIVTGGED 140 (343)
Q Consensus 78 -~~~v~~~~~s~~~~~l~~~~-------------d~~i~v~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 140 (343)
...+..++|+|||++|+++. ++.|.+||+.+++. +..+. +...+.+++|+|+++ +++++.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~- 166 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP- 166 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS-
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC-
Confidence 22378899999999888743 48999999988543 23333 334688999999999 555544
Q ss_pred CeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--ccc---ccceEEEEeecCCCceEEEEeeCCCeEEEEecC
Q psy10867 141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--SQH---SLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC 215 (343)
Q Consensus 141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 215 (343)
.|.+||+.+++....+........... ........ ... ......+++++++. ...........+..+|..
T Consensus 167 -~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 167 -DIYKMDVKTGKYTVALPLRNWNRKGYS---APDVLYFWPHQSPRHEFSMLYTIARFKDDK-QDPATADLLYGYLSVDLK 241 (349)
T ss_dssp -SEEEECTTTCCEEEEECSTTCCCTTBC---CCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEEEEEEEEEETT
T ss_pred -cEEEEeCCCCceeccccccccCCcccc---CccceeeecCCCcceeEEeeeeeeecCCCc-CCccccccceeEEEEecc
Confidence 499999998876655442211100000 00000000 000 00234466665431 000000011112224444
Q ss_pred CCceEEE--eecCCcEEEEEEcC-CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867 216 TGEDLLS--LILDTRLTCVAFDG-TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI 292 (343)
Q Consensus 216 ~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 292 (343)
+++.... -.....+..++|+| ++++++++ ++.|.+||+.+.+.... +. ....+.+++|+|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~-----------~~-~~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA-----------AN-LDHTYYCVAFDKKGD 307 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE-----------EE-CSSCCCEEEECSSSS
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE-----------Ec-CCCCccceEECCCCC
Confidence 4432111 11456788999999 99999988 88999999987543221 21 233467899999999
Q ss_pred EEEEEeCCCcEEEEecccceeeeecc
Q psy10867 293 TLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 293 ~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
+|++++.++.|++||+.+++.+..+.
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp CEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred EEEEecCCCeEEEEeccccceeeeee
Confidence 88888889999999999999888876
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.95 E-value=6.2e-26 Score=189.87 Aligned_cols=287 Identities=11% Similarity=-0.066 Sum_probs=198.8
Q ss_pred EEecCCceEEEEEecCCCCcceE-----EEEeCCceEEEEEcC-CC--eEEEEeCCCcccceecccCCcceEEEEECCCC
Q psy10867 19 VWEPKGGTLLMSYKGASVLSPHS-----MCLLGNDYVLGVEKG-KP--MIQAWPVNSQEKAQLRLICPGRISSMQASPDA 90 (343)
Q Consensus 19 iwd~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~~~-~~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 90 (343)
.+|..++..+..+..+.. .... .+|+|||+.++.... ++ .|.+||+.+++..+....+...+..+.|+|||
T Consensus 14 ~~~~~~g~~~~~lt~~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDV-TCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EECTTTCCEEEECSCTTS-CEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EecCCCCcceEEecCCcc-cccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 457778888888888775 4444 889999987766655 56 48888999988777666666666677899999
Q ss_pred CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEE--EecCCCEEEEe----------------------cCCCeEEE
Q psy10867 91 AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVK--WSADSNFIVTG----------------------GEDGTICV 145 (343)
Q Consensus 91 ~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~i 145 (343)
+.|+. +.++.|++||+.+++....+..+...+.... ++|++++++.. ..+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99887 5577999999999988777666666554444 48899988742 24578999
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCC------CeEEEEecCCCc
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHD------RTCKIFDLCTGE 218 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d------~~i~~wd~~~~~ 218 (343)
||+.+++. ..+..+...+..++|+| ++ +.|+..+.+ ..|.++|...++
T Consensus 173 ~d~~~g~~-----------------------~~l~~~~~~~~~~~~sp~dg--~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 173 VDLKTGES-----------------------TVILQENQWLGHPIYRPYDD--STVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EETTTCCE-----------------------EEEEEESSCEEEEEEETTEE--EEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred EECCCCce-----------------------EEeecCCccccccEECCCCC--CEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 99988632 23334566789999999 98 677766553 378888876655
Q ss_pred eEEEeecC--CcEEEEEEcCCCCEEEEEcC-CC----cEEEEEeecccccccccccCCCCCCccccccCc---EEEEEEc
Q psy10867 219 DLLSLILD--TRLTCVAFDGTEDNIYMGTS-EG----VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ---VTSLSCS 288 (343)
Q Consensus 219 ~~~~~~~~--~~i~~~~~~~~~~~l~~~~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s 288 (343)
........ ..+..++|+|+|+.|+..+. ++ .|++||+.+.+... +..+.++... ...+.|+
T Consensus 228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------l~~~~~~~~~~~~~~~~~~s 298 (388)
T 3pe7_A 228 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ---------LTSMPACSHLMSNYDGSLMV 298 (388)
T ss_dssp CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE---------EEEECCEEEEEECTTSSEEE
T ss_pred eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE---------EEcCCCceeeeecCCCCeEc
Confidence 43333333 35788999999997765433 22 39999988754321 1112111100 1123799
Q ss_pred cCCCEEEEE---------eCCCcEEEEecccceeeeecccCC-----------ceEEEEEccCCCeeeeccc
Q psy10867 289 ITGITLLSS---------SADETLKIWHTISRQCLRTIQHKG-----------PVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 289 ~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~l~~~~~ 340 (343)
|||+.|+.. ..+..|++||+.+++......+.. .+..++|+|||+.|+..+.
T Consensus 299 pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 299 GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp EEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 999988754 456689999998877644333544 5788999999999887653
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=2.3e-24 Score=177.57 Aligned_cols=268 Identities=13% Similarity=0.101 Sum_probs=176.6
Q ss_pred CCeEEEEeCC--Ccccce-ecccCCcceEEEEECCCCCEEEEec---CCeEEEEEccCCc--eEEEecccCCCeEEEEEe
Q psy10867 57 KPMIQAWPVN--SQEKAQ-LRLICPGRISSMQASPDAAYIAVSI---ETKLHMWQISSGR--LLATASSHYQPITIVKWS 128 (343)
Q Consensus 57 ~~~i~iw~~~--~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~---d~~i~v~~~~~~~--~~~~~~~~~~~v~~~~~~ 128 (343)
++.|.+|.++ +++... ....+...+..++|+|||++++++. ++.|.+|++.+++ .+..+..+...+..++|+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 3567777654 444432 2234556778899999999555544 5799999998775 344445567788899999
Q ss_pred cCCCEEEEec-CCCeEEEeecCccceeeeee-cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC
Q psy10867 129 ADSNFIVTGG-EDGTICVWQLSRLICKQTVA-FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD 206 (343)
Q Consensus 129 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 206 (343)
|++++|++++ .++.|.+|++........+. ....+. . +. ...+...+.+++|+|++ +++++...+
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---~------p~--~~~~~~~~~~~~~spdg--~l~v~~~~~ 161 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH---G------PR--PEQDGSHIHYTDLTPDN--RLAVIDLGS 161 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC---C------SS--TTCSSCCEEEEEECTTS--CEEEEETTT
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC---C------CC--ccccCCCceEEEECCCC--cEEEEeCCC
Confidence 9999888877 78999999996322111110 000000 0 00 01133458899999999 677777778
Q ss_pred CeEEEEecC-CCceEEE--ee--cCCcEEEEEEcCCCCEEEE-EcCCCcEEEEEeeccccc-ccc-cccCCCCCCccccc
Q psy10867 207 RTCKIFDLC-TGEDLLS--LI--LDTRLTCVAFDGTEDNIYM-GTSEGVIKSFCLRQVPRT-RDH-HIQDSTSNPDFIGH 278 (343)
Q Consensus 207 ~~i~~wd~~-~~~~~~~--~~--~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~-~~~-~~~~~~~~~~~~~~ 278 (343)
+.|++||+. +++.... +. ....+..++|+|+|+++++ +..++.|.+|++...... ... .... ...-...
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~---~~~~~~~ 238 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT---IPADYTA 238 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES---SCTTCCS
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee---cCCCCCC
Confidence 999999998 5543322 22 2346888999999997766 566889999998852111 000 0000 0000011
Q ss_pred cCcEEEEEEccCCCEE-EEEeCCCcEEEEeccc-c--eeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867 279 EKQVTSLSCSITGITL-LSSSADETLKIWHTIS-R--QCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 279 ~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~-~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
...+..++|+|||++| ++...++.|.+|++.. + +.+..+. +...+..++|+|||++|++++.
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 2458899999999977 4566789999999973 2 4445554 4567899999999999988764
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=8.4e-25 Score=180.24 Aligned_cols=252 Identities=10% Similarity=-0.014 Sum_probs=186.4
Q ss_pred EEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCC-cceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecc
Q psy10867 41 SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-GRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASS 117 (343)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~ 117 (343)
.+++++++.+++++..++.|.+||..+++.+..+..+. ..+..++|+|++++++. ..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678889999988888999999999988775554332 25789999999986654 3578999999999988776653
Q ss_pred cC------CCeEEEEEecCCCEEEEecCC------------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 118 HY------QPITIVKWSADSNFIVTGGED------------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 118 ~~------~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
+. ..+..++|+|+++++++++.+ +.|.+||+.+++... .+...
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-------------------~~~~~ 144 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-------------------PVRTF 144 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-------------------CSEEE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc-------------------eeeec
Confidence 22 237789999999999998865 899999998754322 11122
Q ss_pred cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCC-------------------------cEEEEEE
Q psy10867 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT-------------------------RLTCVAF 234 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------------------~i~~~~~ 234 (343)
. +...+.+++|+|++ + +++++ +.|.+||+.+++....+.... ....+++
T Consensus 145 ~-~~~~~~~~~~s~dg--~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T 1jmx_B 145 P-MPRQVYLMRAADDG--S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR 218 (349)
T ss_dssp E-CCSSCCCEEECTTS--C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred c-CCCcccceeECCCC--c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee
Confidence 2 33468889999999 6 44443 349999999998877765332 3455677
Q ss_pred cCCCC-----------EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEEEEeCCCc
Q psy10867 235 DGTED-----------NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSSSADET 302 (343)
Q Consensus 235 ~~~~~-----------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~ 302 (343)
++++. ++.....++.+.+|++.. +...+..++|+| ++++++++ ++.
T Consensus 219 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~sp~dg~~l~~~--~~~ 276 (349)
T 1jmx_B 219 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD--------------------LTELYFTGLRSPKDPNQIYGV--LNR 276 (349)
T ss_dssp C-------CCCEEEEEEEEEETTTCCEEEEEEEE--------------------CSSCEEEEEECSSCTTEEEEE--ESE
T ss_pred cCCCcCCccccccceeEEEEeccCCcEEeccccc--------------------CCCcceeeEecCCCCCEEEEE--cCe
Confidence 76542 222344556666666532 345678999999 99999888 889
Q ss_pred EEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 303 LKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 303 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
|.+||+.+++.+..+.....+.+++|+|++++|++++
T Consensus 277 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 277 LAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEES
T ss_pred EEEEECccCeEEEEEcCCCCccceEECCCCCEEEEec
Confidence 9999999999888887666788999999999988764
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=5e-25 Score=193.95 Aligned_cols=258 Identities=13% Similarity=0.021 Sum_probs=186.9
Q ss_pred ccceEEEecCC---------CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC---CCeEEEEeCCC---
Q psy10867 3 LLNEVAFSYDG---------SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG---KPMIQAWPVNS--- 67 (343)
Q Consensus 3 ~v~~~~~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~--- 67 (343)
+|..+.|++|| +|+++||++.+++..+....+.. .+..++|+|| +++++++. +...++|.+..
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~-~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPIN-SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCS-EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeeccccc-ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence 56777777776 78999999966665544444435 8999999999 77776654 34556654432
Q ss_pred cccceecccCCcceEEEEECCCCC--EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC----C
Q psy10867 68 QEKAQLRLICPGRISSMQASPDAA--YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED----G 141 (343)
Q Consensus 68 ~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g 141 (343)
+.... +.. ...+...+|+||++ .++++.++.+.+||+.+++.......+ . .+++|+|||++|++++.+ +
T Consensus 101 g~~~~-l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 101 GEEQR-LEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TCCEE-CTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEE
T ss_pred Ccccc-ccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCe
Confidence 22222 222 22344667888875 444555666669999988766555433 3 789999999999988876 7
Q ss_pred eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC--eEEEEecCCCce
Q psy10867 142 TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR--TCKIFDLCTGED 219 (343)
Q Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~ 219 (343)
.|++||+.+++ ...+..|...+..++|+|+| +.|+++..++ .|++||+.+++.
T Consensus 176 ~i~~~d~~~g~-----------------------~~~l~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 176 SLFTSNLSSGG-----------------------LRVFDSGEGSFSSASISPGM--KVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp EEEEEETTTCC-----------------------CEEECCSSCEEEEEEECTTS--CEEEEEECSSCEEEEEECTTTCCE
T ss_pred EEEEEcCCCCC-----------------------ceEeecCCCccccceECCCC--CEEEEccCCCeeEEEEEcCCCCcE
Confidence 89999998763 33456788889999999999 7888888888 899999999887
Q ss_pred EEEee-cCCcEEEEE--------EcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC
Q psy10867 220 LLSLI-LDTRLTCVA--------FDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 220 ~~~~~-~~~~i~~~~--------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
. .+. +...+..++ |+|||..+++++.++.+++|++ .+.. . .+.+.+.+++|+ +
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~-----------~---~~~~~v~~~~~s-d 292 (582)
T 3o4h_A 231 E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV-----------E---APQGNHGRVVLW-R 292 (582)
T ss_dssp E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE-----------C---CCSSEEEEEEEE-T
T ss_pred E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee-----------c---cCCCceEEEEec-C
Confidence 7 443 444555555 9999988899999999999998 2211 0 123568899999 9
Q ss_pred CCEEEEEeCCC---cEEEEeccc
Q psy10867 291 GITLLSSSADE---TLKIWHTIS 310 (343)
Q Consensus 291 ~~~l~s~~~dg---~i~iwd~~~ 310 (343)
++++++++.+. .+++||...
T Consensus 293 g~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 293 GKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp TEEEEEEEETTEEEEEEEETTCC
T ss_pred CEEEEEEcCCCCCCeEEEEcCCC
Confidence 99999888774 477777653
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=1.3e-24 Score=183.37 Aligned_cols=217 Identities=13% Similarity=0.109 Sum_probs=161.6
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccc----------c----
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK----------A---- 71 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~----------~---- 71 (343)
.+.|... +.+++|+... . .+.. .+..+++++++.+++++..++ +++|+...... .
T Consensus 16 ~~~F~~~--~~vri~~~~~-~------~~~~-~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
T 2oit_A 16 DFQFRAL--KKVRIFDSPE-E------LPKE-RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKV 84 (434)
T ss_dssp SEEEEEC--CEEECSCCCS-S------CCCS-CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECC
T ss_pred cceeeee--eeEEecCCcc-c------cCCC-CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccC
Confidence 3445444 4678876531 1 1233 678999999988888888755 89887532110 0
Q ss_pred -eecccCCcceEEEEECCCCCEEE----E-ecCCeEEEEEccCC--------c---eEEEecccCCCeEEEEEecC-CCE
Q psy10867 72 -QLRLICPGRISSMQASPDAAYIA----V-SIETKLHMWQISSG--------R---LLATASSHYQPITIVKWSAD-SNF 133 (343)
Q Consensus 72 -~~~~~~~~~v~~~~~s~~~~~l~----~-~~d~~i~v~~~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~ 133 (343)
.....+...|.+++|+|++++|+ + +.|+.|++||+.++ + .+..+.+|...|.+++|+|+ +++
T Consensus 85 ~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 85 QGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp CCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred ccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence 01123556799999999999999 5 46899999998765 1 24566789999999999997 789
Q ss_pred EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867 134 IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213 (343)
Q Consensus 134 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd 213 (343)
|++++.||.|++||++++. ......+|...|.+++|+|++ ++|++|+.||.|++||
T Consensus 165 las~s~Dg~v~iwD~~~~~----------------------~~~~~~~~~~~v~~v~wspdg--~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETV----------------------KVCATLPSTVAVTSVCWSPKG--KQLAVGKQNGTVVQYL 220 (434)
T ss_dssp EEEEETTSCEEEEEESSSE----------------------EEEEEECGGGCEEEEEECTTS--SCEEEEETTSCEEEEC
T ss_pred EEEEECCCeEEEEEcCCCc----------------------ceeeccCCCCceeEEEEcCCC--CEEEEEcCCCcEEEEc
Confidence 9999999999999998863 223344688999999999998 8999999999999999
Q ss_pred cCCCceEEEee-c-------CCcEEEEEEcCCCCEEEEE-cCCC------cEEEEEeecc
Q psy10867 214 LCTGEDLLSLI-L-------DTRLTCVAFDGTEDNIYMG-TSEG------VIKSFCLRQV 258 (343)
Q Consensus 214 ~~~~~~~~~~~-~-------~~~i~~~~~~~~~~~l~~~-~~d~------~i~i~d~~~~ 258 (343)
.+ ++....+. + ...+.+++|++++.++++. ..+| .+++|++...
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 221 PT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 98 55555443 1 1279999999988877653 3343 3899999865
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=1.7e-23 Score=173.32 Aligned_cols=278 Identities=12% Similarity=0.038 Sum_probs=177.3
Q ss_pred eCCceEEEEE----cCCCeEEEEeC--CCcccceecccCCcceEEEEECCCCCEEEEe-cC----CeEEEEEccC--Cce
Q psy10867 45 LGNDYVLGVE----KGKPMIQAWPV--NSQEKAQLRLICPGRISSMQASPDAAYIAVS-IE----TKLHMWQISS--GRL 111 (343)
Q Consensus 45 ~~~~~~~~~~----~~~~~i~iw~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d----~~i~v~~~~~--~~~ 111 (343)
.++..++..| ..++.|.+|.+ .+++.......+...+..++|+||+++|+++ .+ +.|.+|++.. ++.
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 3444444444 23468999866 4454432222266778889999999988864 33 7999999876 433
Q ss_pred --EEEecccCCCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEE
Q psy10867 112 --LATASSHYQPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTH 188 (343)
Q Consensus 112 --~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 188 (343)
+.....+......+++ ++++|++++ .++.|.+|++............... .+. .......+...+.+
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~g~-------~~~~~~~~~~~~~~ 159 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEF-KGS-------GPDKERQTMPHLHC 159 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEEC-CCC-------CSCTTTCSSCCEEE
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEc-cCC-------CCCccccCCCcceE
Confidence 3333445556777887 777776665 6889999999754322211000000 000 00001123345688
Q ss_pred EEeecCCCceEE-EEeeCCCeEEEEecCCCce--------------EEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEE
Q psy10867 189 VTLSKLGAKSRV-ASVSHDRTCKIFDLCTGED--------------LLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKS 252 (343)
Q Consensus 189 ~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i 252 (343)
++|+|++ +++ ++...++.+.+|++..... .........+..++|+|+++++++++ .++.|.+
T Consensus 160 ~~~spdg--~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 160 VRITPDG--KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEECTTS--SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred EEECCCC--CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 9999999 544 4555589999998875431 12223456688999999999888776 6899999
Q ss_pred EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC--CCcEEEEecc--cce--eeeecccCCceEEE
Q psy10867 253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA--DETLKIWHTI--SRQ--CLRTIQHKGPVLGA 326 (343)
Q Consensus 253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~--~~~--~~~~~~~~~~v~~~ 326 (343)
||+.......... +.....+...+..++|+|||++|+++.. ++.|.+|++. +++ .+..+.....+.++
T Consensus 238 ~~~~~g~~~~~~~------~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~ 311 (361)
T 3scy_A 238 FRYADGMLDEIQT------VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNF 311 (361)
T ss_dssp EEEETTEEEEEEE------EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEE
T ss_pred EEecCCceEEeEE------EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceE
Confidence 9998532211000 1112233455789999999998876665 4899999985 444 34444344578899
Q ss_pred EEccCCCeeeeccc
Q psy10867 327 FLGLLPPAIHDYDF 340 (343)
Q Consensus 327 ~~sp~~~~l~~~~~ 340 (343)
+|+|||++|++++.
T Consensus 312 ~~spdg~~l~~~~~ 325 (361)
T 3scy_A 312 IITPNGKYLLVACR 325 (361)
T ss_dssp EECTTSCEEEEEET
T ss_pred EECCCCCEEEEEEC
Confidence 99999999988763
No 160
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.94 E-value=7.8e-24 Score=174.63 Aligned_cols=282 Identities=12% Similarity=0.092 Sum_probs=200.6
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceeccc------C
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLI------C 77 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~------~ 77 (343)
|+.|.+||..+++.+.++..+.. + .++|+||++++.++. .++.|.+||..+.+.+..+.. +
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~-p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFN-G--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEE-E--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred cCeEEEEECCCCeEEEEecCCCC-C--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 68999999999999998887764 4 999999998777764 246799999998877654432 1
Q ss_pred CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEE-ecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCc-c
Q psy10867 78 PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSR-L 151 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~-~ 151 (343)
......++|+|||++|+++ . ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|++.. +
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 2346689999999998874 2 57999999999988877 543 2 23345677765 6778888999999999865 3
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE--EEeec----
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL--LSLIL---- 225 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~---- 225 (343)
+...... ....+.....++ .+.+++++ ..++..+.++.+.++|+...... ..+..
T Consensus 185 ~~~~~~~----------------~~~~~~~~~~~~-~~~~~~~g--~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 185 KVASQSR----------------SKQMFSVKDDPI-FIAPALDK--DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp SEEEEEE----------------CCCCSCTTTSCB-CSCCEECS--SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred cEeeecc----------------ccceEcCCCCce-EEEecccC--CEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 2221110 000111111221 23345666 45556667899999998755422 22211
Q ss_pred -------CCcEEEEEEcCCCCEEEEEcC-----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867 226 -------DTRLTCVAFDGTEDNIYMGTS-----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC 287 (343)
Q Consensus 226 -------~~~i~~~~~~~~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (343)
......++|+|+++.++++.. .+.|.+||+.+.+. +..+..+. +.+++|
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~-----------v~~i~~~~--p~~ia~ 312 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR-----------VARIPGRD--ALSMTI 312 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-----------EEEEECTT--CCEEEE
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-----------EEEEecCC--eeEEEE
Confidence 111223789999998888643 34899999887554 33445555 899999
Q ss_pred ccCCCEEEEEeCCCcEEEEecccc--eeeeecc-cCCceEEEEEccCCC
Q psy10867 288 SITGITLLSSSADETLKIWHTISR--QCLRTIQ-HKGPVLGAFLGLLPP 333 (343)
Q Consensus 288 s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~-~~~~v~~~~~sp~~~ 333 (343)
+|||++|++++. +.|.+||..++ +.+.++. .......++++|+|+
T Consensus 313 spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 313 DQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999999998887 99999999999 9999974 777889999999986
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.7e-24 Score=182.77 Aligned_cols=230 Identities=10% Similarity=0.061 Sum_probs=160.7
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCC----------ceEEE-----ecccCCCe
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSG----------RLLAT-----ASSHYQPI 122 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~----------~~~~~-----~~~~~~~v 122 (343)
+.+++|+.... .....++.+++++++.+++++....+++|+.... ..+.. ...+...|
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPI 95 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCE
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcc
Confidence 46888764311 1234678999999999998855444999876421 01111 11356679
Q ss_pred EEEEEecCCCEEE----EecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCce
Q psy10867 123 TIVKWSADSNFIV----TGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS 198 (343)
Q Consensus 123 ~~~~~~~~~~~l~----s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 198 (343)
.+++|+|++++|+ +++.|+.|++||+.+....... ..........+.+|...|.+++|+|+.. .
T Consensus 96 ~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~-----------~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~ 163 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ-----------QKRPFAYHKLLKDAGGMVIDMKWNPTVP-S 163 (434)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS-----------SCCCSEEEECCCSGGGSEEEEEECSSCT-T
T ss_pred cEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC-----------CcceeeeeeccCCCCCceEEEEECCCCC-C
Confidence 9999999999999 8899999999999764110000 0000013455677999999999999832 7
Q ss_pred EEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc
Q psy10867 199 RVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG 277 (343)
Q Consensus 199 ~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 277 (343)
+|++++.||+|++||++++....... |...+.+++|+|+|++|++|+.||.|++||++. ........ .......
T Consensus 164 ~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~-~~~~~~~~----~~~~~~~ 238 (434)
T 2oit_A 164 MVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL-QEKKVIPC----PPFYESD 238 (434)
T ss_dssp EEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTC-CEEEEECC----CTTCCTT
T ss_pred EEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCC-cccccccC----CcccCCC
Confidence 99999999999999999886654443 677899999999999999999999999999872 21111100 0000113
Q ss_pred ccCcEEEEEEccCCCEEEE-EeCCCc------EEEEecccc
Q psy10867 278 HEKQVTSLSCSITGITLLS-SSADET------LKIWHTISR 311 (343)
Q Consensus 278 ~~~~v~~~~~s~~~~~l~s-~~~dg~------i~iwd~~~~ 311 (343)
|...+.+++|++++.++++ .+.||. +++|++.+.
T Consensus 239 ~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 239 HPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp SCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 4558999999999887764 344433 899999764
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.93 E-value=3e-23 Score=187.29 Aligned_cols=310 Identities=10% Similarity=0.041 Sum_probs=193.2
Q ss_pred CCeEEEEecCCceEEEEEecCCCC--cc--eEEEEeCCceEEEEEcCC---------CeEEEEeCCCcccceecccCCcc
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVL--SP--HSMCLLGNDYVLGVEKGK---------PMIQAWPVNSQEKAQLRLICPGR 80 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~--~v--~~~~~~~~~~~~~~~~~~---------~~i~iw~~~~~~~~~~~~~~~~~ 80 (343)
||.|++||+.+++....+.+|... .+ ..++|||||+.++.+..+ +.+.+||+.+++... +..+...
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~ 113 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNN 113 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTT
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCc
Confidence 799999999999988888887631 22 348899999888887764 566799999988654 4466778
Q ss_pred eEEEEECCCCCEEEEecCCeEEEEEccCCceEEEe-cccCCCe-----------------EEEEEecCCCEEEEecCCC-
Q psy10867 81 ISSMQASPDAAYIAVSIETKLHMWQISSGRLLATA-SSHYQPI-----------------TIVKWSADSNFIVTGGEDG- 141 (343)
Q Consensus 81 v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg- 141 (343)
+...+|||||+.||...++.|++|++.+++..+.. .++...+ ..+.|+|||+.|+.++.|.
T Consensus 114 ~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~ 193 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (740)
T ss_dssp EEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred ceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc
Confidence 99999999999999888999999999888765432 2333323 3489999999999876443
Q ss_pred eEEEeecCccc-------eeeeeecCCCCCCCCcc-----c-cc---cc--eeeeec------ccccceEEEEeecCCCc
Q psy10867 142 TICVWQLSRLI-------CKQTVAFGIPGSSGKGV-----T-GL---TE--PLHVKS------QHSLPVTHVTLSKLGAK 197 (343)
Q Consensus 142 ~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~-----~-~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~ 197 (343)
.+.+|++.... ....+..+..+...... . .. .+ ....+. +|...+..++|+|++
T Consensus 194 ~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg-- 271 (740)
T 4a5s_A 194 EVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE-- 271 (740)
T ss_dssp TCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT--
T ss_pred CCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC--
Confidence 35555542111 01111111111110000 0 00 00 111122 377789999999999
Q ss_pred eEEEEee----CCCeEEEEecCCCc----e---EEE--eecCCcE-----EEEEEcCCCCEEE-EEc-CCC--cEEEEEe
Q psy10867 198 SRVASVS----HDRTCKIFDLCTGE----D---LLS--LILDTRL-----TCVAFDGTEDNIY-MGT-SEG--VIKSFCL 255 (343)
Q Consensus 198 ~~l~~~~----~d~~i~~wd~~~~~----~---~~~--~~~~~~i-----~~~~~~~~~~~l~-~~~-~d~--~i~i~d~ 255 (343)
++++... .+..|++||+.+++ + ... -.+...+ ..+.|+|||+.++ ..+ .+| .|++||+
T Consensus 272 ~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 272 RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 6555443 23479999999887 1 111 1233333 3688999999876 554 444 5777776
Q ss_pred ecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeC----CCcEEEE--ecccceeeeecc-----cCCce
Q psy10867 256 RQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSA----DETLKIW--HTISRQCLRTIQ-----HKGPV 323 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~----dg~i~iw--d~~~~~~~~~~~-----~~~~v 323 (343)
..... ..+......+..+.. +|++.|+ +++. .+...|| ++..++....+. .....
T Consensus 352 ~~~~~------------~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~ 418 (740)
T 4a5s_A 352 DKKDC------------TFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQY 418 (740)
T ss_dssp TCSSC------------EESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCB
T ss_pred CCCce------------EecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCce
Confidence 64322 123333445555442 4466554 4443 2344454 554444332343 23578
Q ss_pred EEEEEccCCCeeeecc
Q psy10867 324 LGAFLGLLPPAIHDYD 339 (343)
Q Consensus 324 ~~~~~sp~~~~l~~~~ 339 (343)
..+.|||++++++...
T Consensus 419 ~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 419 YSVSFSKEAKYYQLRC 434 (740)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 8999999999877544
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=6.9e-25 Score=197.85 Aligned_cols=270 Identities=11% Similarity=0.014 Sum_probs=184.9
Q ss_pred eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc---ceEEEEECCCCCEEEEe-c---------CCeEEEEEc
Q psy10867 40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG---RISSMQASPDAAYIAVS-I---------ETKLHMWQI 106 (343)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~-~---------d~~i~v~~~ 106 (343)
.+++|+|++.+++++. ++.|++||+.+++....+..+.. .+.+++|||||++|+.+ . ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~~~-d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQSA-DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEECT-TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEcC-CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 4789999998877765 59999999999887766554433 38999999999999864 3 589999999
Q ss_pred cCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc-
Q psy10867 107 SSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP- 185 (343)
Q Consensus 107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (343)
.+++.+... .....+..++|+|||+.|+.+. ++.|++|++.++........+ .....+.++...
T Consensus 98 ~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~-------------~~~~v~~g~~~~v 162 (719)
T 1z68_A 98 SNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNG-------------RENKIFNGIPDWV 162 (719)
T ss_dssp TTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCC-------------BTTTEEESSCCHH
T ss_pred CCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCC-------------CcCCeEcccccce
Confidence 988762111 1135688999999999999886 689999999876543211000 000011222222
Q ss_pred --------eEEEEeecCCCceEEEEeeCCC----------------------------------eEEEEecCCCceE--E
Q psy10867 186 --------VTHVTLSKLGAKSRVASVSHDR----------------------------------TCKIFDLCTGEDL--L 221 (343)
Q Consensus 186 --------v~~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~--~ 221 (343)
..+++|+|+| ++|++++.|. .|++||+.+++.. .
T Consensus 163 ~~ee~~~~~~~~~wSPDG--~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~ 240 (719)
T 1z68_A 163 YEEEMLATKYALWWSPNG--KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ 240 (719)
T ss_dssp HHHHTTCSSCCEEECTTS--SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE
T ss_pred eeeecccCcccEEECCCC--CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee
Confidence 2589999999 7888877552 7899999888753 1
Q ss_pred Ee-------ecCCcEEEEEEcCCCCEEEEEcCC----CcEEEEE----eecccccccccccCCCCCCcc----ccccCcE
Q psy10867 222 SL-------ILDTRLTCVAFDGTEDNIYMGTSE----GVIKSFC----LRQVPRTRDHHIQDSTSNPDF----IGHEKQV 282 (343)
Q Consensus 222 ~~-------~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~~~~~~~~~~~~----~~~~~~v 282 (343)
.+ .+...+..++|+||++++++.... ..|.+|| +.+... ...+ .+|...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-----------~~~~~~~~~~~~~~~ 309 (719)
T 1z68_A 241 EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC-----------PKTQEHIEESRTGWA 309 (719)
T ss_dssp ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-----------CGGGEEEEECSSSCS
T ss_pred EccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce-----------EEEEecccccCCceE
Confidence 22 145568999999998777764332 2488888 544332 1222 3456666
Q ss_pred E-----EEEEccCCCEEEE--EeCCC--cEEEEecccceeeeecc-cCCceEEEEEccCCCeeeeccc
Q psy10867 283 T-----SLSCSITGITLLS--SSADE--TLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 283 ~-----~~~~s~~~~~l~s--~~~dg--~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
. .+.|+|||+.|+. ...+| .|++||+.+++ ...+. +...+..+.++ +++.|+..+.
T Consensus 310 ~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~ 375 (719)
T 1z68_A 310 GGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSN 375 (719)
T ss_dssp SSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEES
T ss_pred ccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEe
Confidence 5 7899999996554 44555 57777877766 34444 55567787777 8887776543
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.92 E-value=4.2e-22 Score=165.04 Aligned_cols=265 Identities=10% Similarity=0.022 Sum_probs=178.6
Q ss_pred CeEEEEec--CCceEEE--EEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC-Ccccceeccc-CCcceEEEEEC
Q psy10867 15 GAISVWEP--KGGTLLM--SYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN-SQEKAQLRLI-CPGRISSMQAS 87 (343)
Q Consensus 15 g~i~iwd~--~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~-~~~~~~~~~~-~~~~v~~~~~s 87 (343)
+.|.+|++ .+++... ... .... .+..++|+|+++++++++.+ .|.+|++. +++....... ..+.+..++|+
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~-~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~s 91 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDE-PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDAD 91 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTC-CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCC-CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEEC
Confidence 56887764 5665432 222 2333 67899999999888777774 99999987 6655432211 11235568999
Q ss_pred CCCCE--EEEe--------------cCCeEEEEEcc-CCceEEEec----ccCCCeEEEEEecCCCEEEEec-CCCeEEE
Q psy10867 88 PDAAY--IAVS--------------IETKLHMWQIS-SGRLLATAS----SHYQPITIVKWSADSNFIVTGG-EDGTICV 145 (343)
Q Consensus 88 ~~~~~--l~~~--------------~d~~i~v~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~-~dg~i~i 145 (343)
|||++ ++++ .++.+.+|++. +++....+. .+...+.+++|+|+|++++++. .++.|.+
T Consensus 92 pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~ 171 (365)
T 1jof_A 92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT 171 (365)
T ss_dssp SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEE
Confidence 99994 4443 57899999997 466544443 2456789999999999888765 3679999
Q ss_pred eecC-ccceeeeeecCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEee-CCCeEEEEecC--CCce
Q psy10867 146 WQLS-RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLC--TGED 219 (343)
Q Consensus 146 wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~--~~~~ 219 (343)
|++. +++.. .+.... .|...+..++|+|++ +++++++ .++.+.+|+++ +++.
T Consensus 172 ~~~~~~g~~~--------------------~~~~~~~~~~g~~p~~~~~spdg--~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 172 HRKLASGEVE--------------------LVGSVDAPDPGDHPRWVAMHPTG--NYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EEECTTSCEE--------------------EEEEEECSSTTCCEEEEEECTTS--SEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEECCCCCEE--------------------EeeeEecCCCCCCCCEeEECCCC--CEEEEEECCCCeEEEEEEeCCCCcE
Confidence 9998 54321 111222 245678999999999 6776665 47899999765 5554
Q ss_pred EE---Eee-cC------C-------cEEEEE-EcCCCCEEEEEcCCC------cEEEEEeecccccccccccCCCCCC-c
Q psy10867 220 LL---SLI-LD------T-------RLTCVA-FDGTEDNIYMGTSEG------VIKSFCLRQVPRTRDHHIQDSTSNP-D 274 (343)
Q Consensus 220 ~~---~~~-~~------~-------~i~~~~-~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~-~ 274 (343)
.. .+. .+ . .+..++ |+|+|++|+++..+. .|.+|++........ +. .
T Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~--------~~~~ 301 (365)
T 1jof_A 230 VYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK--------QLFL 301 (365)
T ss_dssp EEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE--------EEEE
T ss_pred EEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE--------eeee
Confidence 22 222 11 1 488999 999999998876432 899999963111110 00 1
Q ss_pred cccccCcEEEEEEcc---CCCEEEEEeCC-CcEEEEecccc
Q psy10867 275 FIGHEKQVTSLSCSI---TGITLLSSSAD-ETLKIWHTISR 311 (343)
Q Consensus 275 ~~~~~~~v~~~~~s~---~~~~l~s~~~d-g~i~iwd~~~~ 311 (343)
...+...+..++|+| ||++|++++.+ +.|++|++...
T Consensus 302 ~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 302 SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 222344566789999 89999988764 89999998765
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.92 E-value=5.3e-24 Score=178.58 Aligned_cols=283 Identities=8% Similarity=-0.080 Sum_probs=189.3
Q ss_pred EEEecCCceEEEEEecCCCCc-----ceEEEEeCCceEEEEEcC---CCeEEEEeCCCcccceecccCCcceEEEEECCC
Q psy10867 18 SVWEPKGGTLLMSYKGASVLS-----PHSMCLLGNDYVLGVEKG---KPMIQAWPVNSQEKAQLRLICPGRISSMQASPD 89 (343)
Q Consensus 18 ~iwd~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~---~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~ 89 (343)
...|..+++.+..+..+.. . +..++|+|||+.++.... +..|.+|++.+++.......+......+.|+||
T Consensus 13 ~~~d~~~g~~~~~l~~~~~-~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spd 91 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDI-ICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTD 91 (396)
T ss_dssp EEECTTTCCEEEECSCTTS-CEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTT
T ss_pred eeecCCCCcceEEEecCCC-CccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCC
Confidence 3458888888888876644 3 788999999987766543 237888899888765544333322334789999
Q ss_pred CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEE-------------------EEEecCCCEEEEe-----cCCCeEE
Q psy10867 90 AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITI-------------------VKWSADSNFIVTG-----GEDGTIC 144 (343)
Q Consensus 90 ~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~ 144 (343)
|+.|+. +.++.|++|++.+++.......+...... +.|+|+++.++.. ..+..|.
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEE
Confidence 999876 66778999999988776655544442222 3456666665544 3566889
Q ss_pred EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCC------CeEEEEecCCC
Q psy10867 145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHD------RTCKIFDLCTG 217 (343)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d------~~i~~wd~~~~ 217 (343)
+||+.+++. ..+..+...+..+.|+| ++ ..|+..+.+ ..|.+||+..+
T Consensus 172 ~~d~~~g~~-----------------------~~~~~~~~~~~~~~~sp~dg--~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 172 KVDIETGEL-----------------------EVIHQDTAWLGHPIYRPFDD--STVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp EEETTTCCE-----------------------EEEEEESSCEEEEEEETTEE--EEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred EEECCCCcE-----------------------EeeccCCcccccceECCCCC--CEEEEEecCCCCCCCceEEEEECCCC
Confidence 999887532 12224566788999999 67 556555443 46889998766
Q ss_pred ceEEEeec--CCcEEEEEEcCCCCEEEEEcCC-----CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-
Q psy10867 218 EDLLSLIL--DTRLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI- 289 (343)
Q Consensus 218 ~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~- 289 (343)
+....... ...+..++|+|+|++|+.++.+ +.|++||+.+..... +..+.+ .. +.|+|
T Consensus 227 ~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------l~~~~~----~~-~~~s~~ 292 (396)
T 3c5m_A 227 NVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE---------VMVMPP----CS-HLMSNF 292 (396)
T ss_dssp CCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE---------EEECCS----EE-EEEECS
T ss_pred ceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE---------eeeCCC----CC-CCccCC
Confidence 54332222 2257889999999987776543 449999987643211 111111 22 88999
Q ss_pred CCCEEEEEe----------------CCCcEEEEecccceeeeecccCC-----------ceEEEEEccCCCeeeeccc
Q psy10867 290 TGITLLSSS----------------ADETLKIWHTISRQCLRTIQHKG-----------PVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 290 ~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~l~~~~~ 340 (343)
||+++++++ .+..|++||+.+++......+.. .+..++|+|||+.|+..+.
T Consensus 293 dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 293 DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp SSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 999888754 34789999998877543222433 2567899999999887653
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=6.6e-23 Score=185.10 Aligned_cols=273 Identities=12% Similarity=0.070 Sum_probs=182.9
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcc-----eEEEEECCCCCEEEEecC----------CeEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR-----ISSMQASPDAAYIAVSIE----------TKLH 102 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~d----------~~i~ 102 (343)
...+++|+||+.+++++ ++.|++||+.+++....+..|... ...++|||||++|+.+.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999999987 599999999999877666555432 244889999999987443 6788
Q ss_pred EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc
Q psy10867 103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH 182 (343)
Q Consensus 103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
+||+.+++.. .+..|.+.+...+|+|||+.|+.+. ++.|++|++.++...+... .+ .....+.++
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~---~g----------~~~~~~~g~ 160 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW---TG----------KEDIIYNGI 160 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS---CC----------BTTTEEESB
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC---CC----------CccceecCc
Confidence 9999988754 4667788899999999999999885 6899999998765322100 00 000111122
Q ss_pred c---------cceEEEEeecCCCceEEEEeeCC------------------------------------CeEEEEecCC-
Q psy10867 183 S---------LPVTHVTLSKLGAKSRVASVSHD------------------------------------RTCKIFDLCT- 216 (343)
Q Consensus 183 ~---------~~v~~~~~~~~~~~~~l~~~~~d------------------------------------~~i~~wd~~~- 216 (343)
. .....+.|+|+| +.|+.++.| ..|++||+.+
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg--~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~ 238 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNG--TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL 238 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTS--SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSC
T ss_pred ccccccchhcCCCcceEECCCC--CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCC
Confidence 2 222458999999 677776432 1588899988
Q ss_pred --Cc--eEEEee-------cCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeeccc----ccccccccCCCCCCcc--
Q psy10867 217 --GE--DLLSLI-------LDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVP----RTRDHHIQDSTSNPDF-- 275 (343)
Q Consensus 217 --~~--~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~-- 275 (343)
++ ....+. +...+..++|+|||+.++.... +..|++||+.+.. ... ...+
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~---------~~~l~~ 309 (740)
T 4a5s_A 239 SSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV---------ARQHIE 309 (740)
T ss_dssp CSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG---------GGCEEE
T ss_pred CCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE---------EEEeee
Confidence 73 222332 4456899999999997666432 3479999998764 111 1111
Q ss_pred ccccCcEE-----EEEEccCCCEEE-EEeC-C--CcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 276 IGHEKQVT-----SLSCSITGITLL-SSSA-D--ETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 276 ~~~~~~v~-----~~~~s~~~~~l~-s~~~-d--g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
.+|...+. .+.|+|||+.|+ ..+. + ..|++||+.+++..........+..+. .+|++.|+..+
T Consensus 310 ~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~-~~d~~~i~f~~ 381 (740)
T 4a5s_A 310 MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIE-ALTSDYLYYIS 381 (740)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEE-EECSSEEEEEE
T ss_pred ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEE-EEeCCEEEEEE
Confidence 23444443 678999999877 6653 3 368888987766554333445565543 24466655443
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=3e-22 Score=167.45 Aligned_cols=264 Identities=12% Similarity=0.033 Sum_probs=179.9
Q ss_pred EEEecCCCC--eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867 7 VAFSYDGSG--AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM 84 (343)
Q Consensus 7 ~~~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~ 84 (343)
++|..+.+| .|.+||+.+++......++.. .+..++|+||++.|+.+..++.|.+||+.+++.......+...+...
T Consensus 50 l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~-~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 128 (388)
T 3pe7_A 50 LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD-NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYG 128 (388)
T ss_dssp EEEEECTTSSCEEEEEETTTCEEEECCCSSCB-CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEE
T ss_pred EEEEEcCCCCceEEEEeCCCCceEEeeeCCCC-CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhccccc
Confidence 444444345 588899999988877777766 66678999999888888877899999999988766555555555444
Q ss_pred E--ECCCCCEEEEe-----------------------cCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEec
Q psy10867 85 Q--ASPDAAYIAVS-----------------------IETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGG 138 (343)
Q Consensus 85 ~--~s~~~~~l~~~-----------------------~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~ 138 (343)
. ++|+++++++. .+..|.+||+.+++... +..+...+..+.|+| +++.|+...
T Consensus 129 ~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 129 TWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEE
T ss_pred ceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEE
Confidence 3 48999988841 23689999999887544 445667789999999 999888776
Q ss_pred CC------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc--cceEEEEeecCCCceEEEEeeC-C---
Q psy10867 139 ED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSH-D--- 206 (343)
Q Consensus 139 ~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~-d--- 206 (343)
.+ ..|.++|+.... ...+..+. ..+..++|+|++ +.|+..+. +
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~-----------------------~~~l~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~ 262 (388)
T 3pe7_A 208 EGPHDLVDARMWLINEDGTN-----------------------MRKVKTHAEGESCTHEFWVPDG--SALVYVSYLKGSP 262 (388)
T ss_dssp CSCTTTSSCSEEEEETTSCC-----------------------CEESCCCCTTEEEEEEEECTTS--SCEEEEEEETTCC
T ss_pred ecCCCCCcceEEEEeCCCCc-----------------------eEEeeeCCCCcccccceECCCC--CEEEEEecCCCCC
Confidence 53 367777876542 12222233 357788999999 55544332 2
Q ss_pred -CeEEEEecCCCceEEEeecCCc------EEEEEEcCCCCEEEEE---------cCCCcEEEEEeecccccccccccCCC
Q psy10867 207 -RTCKIFDLCTGEDLLSLILDTR------LTCVAFDGTEDNIYMG---------TSEGVIKSFCLRQVPRTRDHHIQDST 270 (343)
Q Consensus 207 -~~i~~wd~~~~~~~~~~~~~~~------i~~~~~~~~~~~l~~~---------~~d~~i~i~d~~~~~~~~~~~~~~~~ 270 (343)
..|++||+.+++.......... ...++|+|+|+.|+.. ..+..|++||+.+....
T Consensus 263 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--------- 333 (388)
T 3pe7_A 263 DRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH--------- 333 (388)
T ss_dssp CEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE---------
T ss_pred cceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE---------
Confidence 2499999998875433222221 1123799999988764 45668999998764321
Q ss_pred CCCccccccC-----------cEEEEEEccCCCEEEEEe-CCCcEEEEecc
Q psy10867 271 SNPDFIGHEK-----------QVTSLSCSITGITLLSSS-ADETLKIWHTI 309 (343)
Q Consensus 271 ~~~~~~~~~~-----------~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 309 (343)
.+..+.. .+..++|+|||+.|+..+ .+|...+|.+.
T Consensus 334 ---~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 334 ---RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ---EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ---EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 1222333 467889999999887655 56777777553
No 168
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.90 E-value=2.7e-20 Score=151.63 Aligned_cols=275 Identities=9% Similarity=-0.037 Sum_probs=198.1
Q ss_pred CCeEEEEecCCceEEEEEec------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEEC
Q psy10867 14 SGAISVWEPKGGTLLMSYKG------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQAS 87 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s 87 (343)
++.|.++|.++++....+.. ... .+..+++.. +++.++...++.|.+||..+++.+..+. .......++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~-~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGD-VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBS-CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCc-cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 89999999999987765421 112 467788865 5555555666899999999998876553 34678899999
Q ss_pred CCCCEEEEe-cCCeEEEEEccCCceEEEecccC-----CCeEEEEEecCCCEEEEec-CCCeEEEeecCccceeeeeecC
Q psy10867 88 PDAAYIAVS-IETKLHMWQISSGRLLATASSHY-----QPITIVKWSADSNFIVTGG-EDGTICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 88 ~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~ 160 (343)
++++++++. .++.|.+||+.+++....+.... .....+++ .+++.+++.. .++.|.++|+.+++....+.
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~-- 169 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT-- 169 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE--
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE--
Confidence 999766665 78999999999998877665332 14556777 3444444443 48899999999876554332
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC----------CeEEEEecCCCceEEEeec--CCc
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD----------RTCKIFDLCTGEDLLSLIL--DTR 228 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~--~~~ 228 (343)
.......++++|++ +++++...+ +.|.++|..+++....+.. ...
T Consensus 170 ---------------------~g~~p~~i~~~~dG--~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~ 226 (328)
T 3dsm_A 170 ---------------------IGIQPTSLVMDKYN--KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW 226 (328)
T ss_dssp ---------------------CSSCBCCCEECTTS--EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC
T ss_pred ---------------------cCCCccceEEcCCC--CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC
Confidence 12234678889988 666666554 7899999999988777764 346
Q ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-CCCEEEEE----eCCCcE
Q psy10867 229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI-TGITLLSS----SADETL 303 (343)
Q Consensus 229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~----~~dg~i 303 (343)
...++++|+++.|+++.. .|.+||..+...... ..+..+......++++| +++++++. ..++.|
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~---------~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR---------PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS---------CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCCCceeee---------eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 899999999999998765 899999876543211 11111245788999999 55556665 578899
Q ss_pred EEEecccceeeeecccCCceEEEEEc
Q psy10867 304 KIWHTISRQCLRTIQHKGPVLGAFLG 329 (343)
Q Consensus 304 ~iwd~~~~~~~~~~~~~~~v~~~~~s 329 (343)
.+||.. ++.+.++........++|-
T Consensus 296 ~v~d~~-g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 296 YRYSPQ-GKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp EEECTT-CCEEEEEEEEESEEEEEEE
T ss_pred EEECCC-CCEEEEEEeccCcceEEEe
Confidence 999997 9999988855555666664
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=2.5e-21 Score=160.45 Aligned_cols=260 Identities=11% Similarity=-0.003 Sum_probs=169.7
Q ss_pred CeEEEEeC--CCcccceecc---cCCcceEEEEECCCCCEEEEecCCeEEEEEcc-CCceEEEeccc-CCCeEEEEEecC
Q psy10867 58 PMIQAWPV--NSQEKAQLRL---ICPGRISSMQASPDAAYIAVSIETKLHMWQIS-SGRLLATASSH-YQPITIVKWSAD 130 (343)
Q Consensus 58 ~~i~iw~~--~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~-~~~~~~~~~~~-~~~v~~~~~~~~ 130 (343)
+.|.+|++ .+++...... .....+..++|+||+++|+++..+.|.+|++. +++........ .+...+++|+|+
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spd 93 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTN 93 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSC
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCC
Confidence 46777654 4554332211 23346788999999998876433399999997 77665433211 123556899999
Q ss_pred CCE--EEEec-------------CCCeEEEeecCc-cceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeec
Q psy10867 131 SNF--IVTGG-------------EDGTICVWQLSR-LICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSK 193 (343)
Q Consensus 131 ~~~--l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~ 193 (343)
+++ ++++. .+|.+.+|++.. +.....+ ... ..+...+.+++|+|
T Consensus 94 g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~-------------------~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 94 TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV-------------------QNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE-------------------EEEECCTTCCEEEEEECT
T ss_pred CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE-------------------eeEEeCCCCcceEEEECC
Confidence 994 55553 689999999974 3322211 111 12456789999999
Q ss_pred CCCceEEEEee-CCCeEEEEecC-CCceE--EEee---cCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeec--ccccc-
Q psy10867 194 LGAKSRVASVS-HDRTCKIFDLC-TGEDL--LSLI---LDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQ--VPRTR- 262 (343)
Q Consensus 194 ~~~~~~l~~~~-~d~~i~~wd~~-~~~~~--~~~~---~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~--~~~~~- 262 (343)
++ ++++++. .++.|++||+. +++.. ..+. +...+..++|+|+|+++++++. ++.|.+|++.. .....
T Consensus 155 dG--~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 232 (365)
T 1jof_A 155 TE--TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT 232 (365)
T ss_dssp TS--SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CC--CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence 99 6666654 46899999998 67653 2333 2456899999999999988764 78999998763 21100
Q ss_pred cccccCCCCCCccccccC------cEEEEE-EccCCCEEEEEeCCC------cEEEEecc-cceeee---ecc-cCCceE
Q psy10867 263 DHHIQDSTSNPDFIGHEK------QVTSLS-CSITGITLLSSSADE------TLKIWHTI-SRQCLR---TIQ-HKGPVL 324 (343)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~------~v~~~~-~s~~~~~l~s~~~dg------~i~iwd~~-~~~~~~---~~~-~~~~v~ 324 (343)
...+.. ....+.+|.. .+..++ |+|||++|++++.+. .|.+|++. +++... ... +...+.
T Consensus 233 ~~~~~~--~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 233 HHSFPL--IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp EEEEES--SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT
T ss_pred cceEEc--CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc
Confidence 000000 0001122332 588999 999999888765432 89999996 566543 233 445577
Q ss_pred EEEEcc---CCCeeeeccc
Q psy10867 325 GAFLGL---LPPAIHDYDF 340 (343)
Q Consensus 325 ~~~~sp---~~~~l~~~~~ 340 (343)
.++|+| ||++|++++.
T Consensus 311 ~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp CCCEEECTTCTTEEEEECS
T ss_pred cceecCCCcCCCEEEEEEc
Confidence 899999 8999998764
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.90 E-value=1.1e-21 Score=175.34 Aligned_cols=266 Identities=10% Similarity=-0.001 Sum_probs=181.6
Q ss_pred EEecCCCCcceEEEEeCCceEEEEE--cCCCeEEEEeCCCcccceecccCCcceE---------EEEEC--CCCCE-EEE
Q psy10867 30 SYKGASVLSPHSMCLLGNDYVLGVE--KGKPMIQAWPVNSQEKAQLRLICPGRIS---------SMQAS--PDAAY-IAV 95 (343)
Q Consensus 30 ~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-l~~ 95 (343)
.+.+|.. .+..+++++++.+++.. ..++...||....+...+.+..+...+. ...|+ |||+. |+.
T Consensus 18 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 18 LVASRSG-RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHTCS-CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHhhcCC-ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 3556777 89999999998777777 5568899998544443444445555555 55555 99998 776
Q ss_pred ec--CCeEEEEEcc--C-CceEEEecc-----cCCCeEEEEEecCCCEEEEecCC----------CeEEEeecCc-----
Q psy10867 96 SI--ETKLHMWQIS--S-GRLLATASS-----HYQPITIVKWSADSNFIVTGGED----------GTICVWQLSR----- 150 (343)
Q Consensus 96 ~~--d~~i~v~~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~----- 150 (343)
+. +..|.++++. . ++ ...+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 54 4567777765 2 44 445554 56678899999999999998876 5899999987
Q ss_pred -cceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeCC--------CeEEEEecC-CC--
Q psy10867 151 -LICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSHD--------RTCKIFDLC-TG-- 217 (343)
Q Consensus 151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~-~~-- 217 (343)
+. ...+. .+...+..++|+|+| ++|+.++.+ ..|++||+. ++
T Consensus 176 ~~~-----------------------~~~l~~~~~~~~~~~~~SpDG--~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 176 RSA-----------------------VRELSDDAHRFVTGPRLSPDG--RQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp GGG-----------------------SEESSCSCSSEECCCEECTTS--SEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred CCc-----------------------eeEEEecCCCcccCceECCCC--CEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 42 12223 445677889999999 788777654 479999998 56
Q ss_pred -ceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC--cEEEEEeecccccccccccCCCCCCccccccC--------cEEEE
Q psy10867 218 -EDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG--VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK--------QVTSL 285 (343)
Q Consensus 218 -~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~ 285 (343)
+...... +...+..+.|+|||++++++..++ .|++||+........ ...+.. .+..+
T Consensus 231 ~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l-----------~~~~~~~~~p~w~~~~~~~ 299 (662)
T 3azo_A 231 ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL-----------CRREEEFAGPLWTPGMRWF 299 (662)
T ss_dssp EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES-----------SCCSSBSSCCCCSTTCCSE
T ss_pred cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeec-----------ccccccccCccccccCceE
Confidence 3333333 357899999999999888888888 455555433221110 011111 14568
Q ss_pred EEccCCCEEEEEeCCCcEEEE--ecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867 286 SCSITGITLLSSSADETLKIW--HTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 286 ~~s~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~ 336 (343)
+|+|+++++++++. +.+++| |+.+++ +..+. +.+.+..+ |++++..++
T Consensus 300 ~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~ 350 (662)
T 3azo_A 300 APLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAV 350 (662)
T ss_dssp EECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEETTEEE
T ss_pred eEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCCCEEE
Confidence 99999999999998 999999 555555 56666 66667666 145555444
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.90 E-value=4.2e-20 Score=147.84 Aligned_cols=236 Identities=11% Similarity=0.073 Sum_probs=174.8
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc------cCCcceEEEEE-CCCCCEEEEec--CCeEEEEEccC
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------ICPGRISSMQA-SPDAAYIAVSI--ETKLHMWQISS 108 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------~~~~~v~~~~~-s~~~~~l~~~~--d~~i~v~~~~~ 108 (343)
.+.+++++|++.++++...++.|.+||.+ ++....+. .+...+..+++ .++++++++.. ++.|.+|+ .+
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~ 108 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QY 108 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TT
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CC
Confidence 78999999999988888777999999987 44343332 23456889999 57888887753 78999999 56
Q ss_pred CceEEEec-ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867 109 GRLLATAS-SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187 (343)
Q Consensus 109 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 187 (343)
++.+..+. .+...+.+++++|+++++++...++.|.+||.... ....+ ....+...+.
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~--------------------~~~~~~~~p~ 167 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKF--------------------GCSKHLEFPN 167 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEE--------------------ECTTTCSSEE
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EEEEe--------------------CCCCccCCcE
Confidence 77776664 34457899999999998888888899999996542 21111 0113445689
Q ss_pred EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---CcEEEEEEcCCCCEEEEEcCCC-cEEEEEeeccccccc
Q psy10867 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---TRLTCVAFDGTEDNIYMGTSEG-VIKSFCLRQVPRTRD 263 (343)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~ 263 (343)
.+++++++ +++++...++.|++||. +++.+..+... ..+..++++++|+++++...++ .|.+||... ..
T Consensus 168 ~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~--- 240 (286)
T 1q7f_A 168 GVVVNDKQ--EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QL--- 240 (286)
T ss_dssp EEEECSSS--EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CE---
T ss_pred EEEECCCC--CEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CE---
Confidence 99999998 78888788999999996 56666666533 5689999999999888887776 999998542 11
Q ss_pred ccccCCCCCCccccc--cCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867 264 HHIQDSTSNPDFIGH--EKQVTSLSCSITGITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 264 ~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 312 (343)
+..+..+ ...+.+++++|+|+++++ +.|+.|++|++....
T Consensus 241 --------~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 241 --------ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp --------EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred --------EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 1122222 234789999999987777 679999999986543
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.89 E-value=2.1e-20 Score=152.45 Aligned_cols=250 Identities=10% Similarity=0.011 Sum_probs=179.7
Q ss_pred cceEEEEeCCceEEEEEcCC------------------------CeEEEEeCCCcccceecc-cCCcceEEEEECCCCCE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGK------------------------PMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAY 92 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~------------------------~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~ 92 (343)
.+.+++++|+|+++++...+ +.|.+||..+++...... .+......++++|+|++
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 78999999999999888876 479999998888765443 34457899999999998
Q ss_pred EEEe-cCCeEEEEEccCCc-eEEEe---------cccCCCeEEEEEec-CCCEEEEec-CCCeEEEeecCccceeeeeec
Q psy10867 93 IAVS-IETKLHMWQISSGR-LLATA---------SSHYQPITIVKWSA-DSNFIVTGG-EDGTICVWQLSRLICKQTVAF 159 (343)
Q Consensus 93 l~~~-~d~~i~v~~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 159 (343)
+++. .++.|++|+..... .+..+ .++......++++| +++++++.+ .++.|++|+.. +.....+..
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~~~ 183 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQWGE 183 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEEECE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEecc
Confidence 8874 57899999975442 44444 23445789999999 788888876 68999999954 433332210
Q ss_pred CCCCCCCCccccccceeeeecccccceEEEEeecC-CCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEc
Q psy10867 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL-GAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFD 235 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~ 235 (343)
.... . ....++...+..++++|+ + .++++...++.|++||..+++.+..+. ....+..++++
T Consensus 184 ~g~~--~----------~~~~~~~~~p~gia~d~~~g--~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 249 (329)
T 3fvz_A 184 ESSG--S----------SPRPGQFSVPHSLALVPHLD--QLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI 249 (329)
T ss_dssp ECCS--S----------SCCTTEESCEEEEEEETTTT--EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE
T ss_pred CCCC--C----------CCCCcccCCCcEEEEECCCC--EEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeec
Confidence 0000 0 000123345789999998 6 788888889999999998899888875 34568899999
Q ss_pred C------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 236 G------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 236 ~------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
| +++..++...+..|++||+.+......+ ....++...+..++++|+|.++++...++.|++|++.
T Consensus 250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~--------~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF--------KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE--------CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE--------cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 9 3332222334558999998765443221 0113456778999999999888899999999999985
Q ss_pred c
Q psy10867 310 S 310 (343)
Q Consensus 310 ~ 310 (343)
.
T Consensus 322 ~ 322 (329)
T 3fvz_A 322 E 322 (329)
T ss_dssp E
T ss_pred c
Confidence 4
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.88 E-value=2.7e-20 Score=152.31 Aligned_cols=272 Identities=8% Similarity=-0.033 Sum_probs=189.1
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEec
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATAS 116 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~ 116 (343)
.+.+++|+|++..++....++.++.| .++....+..+...+.+++|+|+++++++ ..++.|.+||..+++......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 57788899887666555555788888 23334444456667899999999998776 467899999998887665544
Q ss_pred ccCCCeEEEEEecCCCEEEEecCC----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee
Q psy10867 117 SHYQPITIVKWSADSNFIVTGGED----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS 192 (343)
Q Consensus 117 ~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 192 (343)
.+...+.+++++|+++++++...+ +.|.+||..+......+ ....+...+..++++
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~--------------------~~~~~~~~~~~i~~d 143 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII--------------------EDLSTAYCIDDMVFD 143 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE--------------------CSSSSCCCEEEEEEC
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE--------------------ccCccCCcccceEEC
Confidence 566789999999999988877666 68999998876432111 001234578899999
Q ss_pred cCCCceEEEEeeC------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecc-cccccc
Q psy10867 193 KLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQV-PRTRDH 264 (343)
Q Consensus 193 ~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~-~~~~~~ 264 (343)
|++ .++++... .+.|..+|..+++..........+..++|+|+++.|+++ ..++.|.+||+... ......
T Consensus 144 ~~g--~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~ 221 (333)
T 2dg1_A 144 SKG--GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF 221 (333)
T ss_dssp TTS--CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE
T ss_pred CCC--CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc
Confidence 998 66666543 366777776655544333334457899999999866554 56789999998642 111100
Q ss_pred cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCC------ceEEEEEccCCCeeee
Q psy10867 265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKG------PVLGAFLGLLPPAIHD 337 (343)
Q Consensus 265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~------~v~~~~~sp~~~~l~~ 337 (343)
. ......+.++ ..+..++++++|+++++...++.|.+||. +++.+..+. +.. .+.+++|+||++.|+.
T Consensus 222 ~---~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 222 G---ATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp E---EEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred c---ceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEE
Confidence 0 0000011122 46788999999998888888899999998 566666665 322 6899999999887775
Q ss_pred cc
Q psy10867 338 YD 339 (343)
Q Consensus 338 ~~ 339 (343)
++
T Consensus 297 ~~ 298 (333)
T 2dg1_A 297 CS 298 (333)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=1.2e-20 Score=158.16 Aligned_cols=257 Identities=10% Similarity=0.002 Sum_probs=171.1
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEE-----------
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISS----------- 83 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~----------- 83 (343)
..|.+||+.+++......++.. ....+.|+|||+.++....++.|.+|++.+++.......+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~-~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 138 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGD-NTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK 138 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCB-CTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred ceEEEEECCCCcEEEeecCCCC-ccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence 4788889988876554444433 3445889999988877777689999999988765544433332222
Q ss_pred --------EEECCCCCEEEE------ecCCeEEEEEccCCceEEEecccCCCeEEEEEec-CCCEEEEecCC------Ce
Q psy10867 84 --------MQASPDAAYIAV------SIETKLHMWQISSGRLLATASSHYQPITIVKWSA-DSNFIVTGGED------GT 142 (343)
Q Consensus 84 --------~~~s~~~~~l~~------~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------g~ 142 (343)
+.|+|+++.++. ..+..|++||+.+++..... .+...+..+.|+| +++.|+..+.+ ..
T Consensus 139 ~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (396)
T 3c5m_A 139 LVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDAR 217 (396)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCC
T ss_pred cccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCce
Confidence 356788877664 24558999999988765544 4667789999999 78877766543 35
Q ss_pred EEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc--ccceEEEEeecCCCceEEEEeeCC-----CeEEEEecC
Q psy10867 143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH--SLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLC 215 (343)
Q Consensus 143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~ 215 (343)
|.+||+..... ..+..+ ...+..++|+|++ +.|+.++.+ +.|++||+.
T Consensus 218 l~~~d~~~~~~-----------------------~~l~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 218 MWLVNEDGSNV-----------------------RKIKEHAEGESCTHEFWIPDG--SAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp CEEEETTSCCC-----------------------EESSCCCTTEEEEEEEECTTS--SCEEEEEEETTTCCEEEEEECTT
T ss_pred EEEEECCCCce-----------------------eEeeccCCCccccceEECCCC--CEEEEEecCCCCccceEEEEECC
Confidence 88888765421 111112 2357889999999 666655443 559999998
Q ss_pred CCceEEEeecCCcEEEEEEcC-CCCEEEEEc----------------CCCcEEEEEeecccccccccccCCCCCCccccc
Q psy10867 216 TGEDLLSLILDTRLTCVAFDG-TEDNIYMGT----------------SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278 (343)
Q Consensus 216 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~----------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 278 (343)
+++......... .. +.|+| +++++++++ .+..|++||+...... .+..+
T Consensus 273 ~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------~l~~~ 338 (396)
T 3c5m_A 273 TLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ------------KLCKH 338 (396)
T ss_dssp TCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC------------EEEEC
T ss_pred CCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE------------EccCC
Confidence 887654333332 33 89999 999888754 3478999998764321 12223
Q ss_pred cC-----------cEEEEEEccCCCEEEEEeC-CCcEEEE--ecccce
Q psy10867 279 EK-----------QVTSLSCSITGITLLSSSA-DETLKIW--HTISRQ 312 (343)
Q Consensus 279 ~~-----------~v~~~~~s~~~~~l~s~~~-dg~i~iw--d~~~~~ 312 (343)
.. .+..++|+|||+.|+..+. ++...+| ++.+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 339 STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 22 2456789999998876664 5555555 444444
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.88 E-value=2e-18 Score=149.33 Aligned_cols=306 Identities=9% Similarity=-0.001 Sum_probs=212.1
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCC--CcccceecccCCcceE
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN--SQEKAQLRLICPGRIS 82 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~--~~~~~~~~~~~~~~v~ 82 (343)
+.+.++..+++.|.++|..+++.+.++.... .+..+.|+|||+++.+++.++.|.+||+. +.+.+..... .....
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~ 243 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEAR 243 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCc
Confidence 3456677778999999999999999988655 67799999999888888888999999995 6665544433 33467
Q ss_pred EEEEC----CCCCEEEEe--cCCeEEEEEccCCceEEEecc----------cCC-CeEEEEEecCCC-EEEEecCCCeEE
Q psy10867 83 SMQAS----PDAAYIAVS--IETKLHMWQISSGRLLATASS----------HYQ-PITIVKWSADSN-FIVTGGEDGTIC 144 (343)
Q Consensus 83 ~~~~s----~~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~-~l~s~~~dg~i~ 144 (343)
.++|+ |||++++++ .++.|.++|..+.+.+..+.. |.. .+..+..++++. +++....+|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 99999 699988863 568999999999988877642 112 577888888755 455556779999
Q ss_pred EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE-EeeCCCeEEEEecCCCceEEEe
Q psy10867 145 VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA-SVSHDRTCKIFDLCTGEDLLSL 223 (343)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~ 223 (343)
++|........ +... ........+.|+|++ ++++ +...++.|.++|+.+++.+..+
T Consensus 324 ~vd~~~~~~~~--------------------v~~i-~~~~~~~d~~~~pdg--r~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 324 LVDYTDLNNLK--------------------TTEI-SAERFLHDGGLDGSH--RYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp EEETTCSSEEE--------------------EEEE-ECCSSEEEEEECTTS--CEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEecCCCccce--------------------eeee-eccccccCceECCCC--CEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 99987653211 1111 233456688999999 5554 4556889999999999887766
Q ss_pred ec-CCcE---EEEE-EcCCCCEEE-EEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867 224 IL-DTRL---TCVA-FDGTEDNIY-MGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS 296 (343)
Q Consensus 224 ~~-~~~i---~~~~-~~~~~~~l~-~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 296 (343)
.. .... ..+. ++|++..++ ++. .++.|.++|......... ..+.+..+......-..+..+|++++|.+
T Consensus 381 ~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~----~~kvv~~i~~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 381 DTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDN----AWKILDSFPALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp ECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTT----BTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred eccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccc----cCEEEEEEecCCCCCEEEEeCCCCCeEEE
Confidence 54 2111 1222 688755554 443 468999999886321100 01113333333233344778999998887
Q ss_pred EeC-------CCcEEEEecccc-----ee-eeecc---------cCCceEEEEEccCCCeeeeccc
Q psy10867 297 SSA-------DETLKIWHTISR-----QC-LRTIQ---------HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 297 ~~~-------dg~i~iwd~~~~-----~~-~~~~~---------~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
... .+.|.++|+.+. .. +..+. ....+..+.|+|+|+++..+..
T Consensus 457 ~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~ 522 (567)
T 1qks_A 457 DATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVW 522 (567)
T ss_dssp ECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred ecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEee
Confidence 663 359999999877 21 12221 2457899999999999988743
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=1.8e-20 Score=167.50 Aligned_cols=268 Identities=11% Similarity=-0.049 Sum_probs=178.5
Q ss_pred CCCCeEEEEecCCceEEEEEecCCCCcce---------EEEEe--CCceE-EEEEcC-CCeEEEEeCC--C-cccceecc
Q psy10867 12 DGSGAISVWEPKGGTLLMSYKGASVLSPH---------SMCLL--GNDYV-LGVEKG-KPMIQAWPVN--S-QEKAQLRL 75 (343)
Q Consensus 12 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~~~-~~~i~iw~~~--~-~~~~~~~~ 75 (343)
+.++...||....+.....+..+.. .+. ...|+ |||+. ++.+.+ +..|.++++. + ++.. .+.
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~ 121 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESALPAPW-NVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLT 121 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESSCTTC-CBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECS
T ss_pred ccCCcEEEEEECCCCCcceeCCCCc-cccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-ecc
Confidence 3467889998655555666766665 555 66666 99876 655543 4667777776 3 4433 333
Q ss_pred c-----CCcceEEEEECCCCCEEEE-ecC----------CeEEEEEccC------CceEEEec-ccCCCeEEEEEecCCC
Q psy10867 76 I-----CPGRISSMQASPDAAYIAV-SIE----------TKLHMWQISS------GRLLATAS-SHYQPITIVKWSADSN 132 (343)
Q Consensus 76 ~-----~~~~v~~~~~s~~~~~l~~-~~d----------~~i~v~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~ 132 (343)
. +...+..++|+|||+.|+. +.+ ..|++||+.+ ++.. .+. .+...+..++|+|||+
T Consensus 122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~ 200 (662)
T 3azo_A 122 PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGR 200 (662)
T ss_dssp CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSS
T ss_pred CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCC
Confidence 3 5678899999999998886 444 4899999987 5544 444 5556788899999999
Q ss_pred EEEEecCC--------CeEEEeecC-ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867 133 FIVTGGED--------GTICVWQLS-RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV 203 (343)
Q Consensus 133 ~l~s~~~d--------g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 203 (343)
+|+.++.+ ..|.+||+. ++.... .......+...+..+.|+|++ ++++++
T Consensus 201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~-------------------~~~l~~~~~~~~~~~~~spdg--~l~~~~ 259 (662)
T 3azo_A 201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFAD-------------------TRTLLGGPEEAIAQAEWAPDG--SLIVAT 259 (662)
T ss_dssp EEEEEEECTTCCTTTCEEEEEEEECTTSCEEE-------------------EEEEEEETTBCEEEEEECTTS--CEEEEE
T ss_pred EEEEEECCCCCCCCCCcEEEEEEECCCCcccc-------------------cEEeCCCCCceEcceEECCCC--eEEEEE
Confidence 99887754 479999998 441100 222333456789999999999 677788
Q ss_pred eCCC--eEEEEecCCCceEEEeecCCc---------EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867 204 SHDR--TCKIFDLCTGEDLLSLILDTR---------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN 272 (343)
Q Consensus 204 ~~d~--~i~~wd~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 272 (343)
..++ .|.+||+.+++......+... +..++|+|++++++++.. +.+++|.+...... +
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~----------~ 328 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE----------L 328 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE----------E
T ss_pred CCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc----------E
Confidence 8888 677777767665443332221 467899999999999998 99999965532110 2
Q ss_pred CccccccCcEEEE-EEccCCCEEEEEeCCC--cEEEEecccceee
Q psy10867 273 PDFIGHEKQVTSL-SCSITGITLLSSSADE--TLKIWHTISRQCL 314 (343)
Q Consensus 273 ~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~ 314 (343)
..+..|...+..+ +++++.-++++++.+. .|.++|+.+++..
T Consensus 329 ~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 329 VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 2344566667766 4443333444555554 4556676666543
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.88 E-value=3.3e-19 Score=145.86 Aligned_cols=253 Identities=10% Similarity=0.003 Sum_probs=173.8
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI 93 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 93 (343)
++.++.| .++....+..+.. .+.+++|+|++.+++++..++.|.+||.++++.......+...+.+++++|+++++
T Consensus 26 ~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~ 101 (333)
T 2dg1_A 26 ESELQTI---TAEPWLEISKKGL-QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLF 101 (333)
T ss_dssp GGGSCEE---ECEEEEEEESSCC-CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEE
T ss_pred cccCccc---ccceeEEEeccCc-cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEE
Confidence 5667778 4566677777766 78999999999988888877999999998877655443556789999999999988
Q ss_pred EEec-C----CeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecC------CCeEEEeecCccceeeeeecC
Q psy10867 94 AVSI-E----TKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGE------DGTICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 94 ~~~~-d----~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~ 160 (343)
++.. + +.|.+||.+++.....+. .+...+.+++++|+++++++... .+.|..+|..+....
T Consensus 102 v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~------ 175 (333)
T 2dg1_A 102 VCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT------ 175 (333)
T ss_dssp EEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE------
T ss_pred EEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE------
Confidence 8754 3 589999998877653333 24457899999999988777654 355666665543211
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEe------ec--CCcEEE
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSL------IL--DTRLTC 231 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~------~~--~~~i~~ 231 (343)
.+......+..++|+|++. .++++.+.++.|.+||+++ ++....+ .. ...+..
T Consensus 176 -----------------~~~~~~~~~~~i~~~~dg~-~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T 2dg1_A 176 -----------------PIIQNISVANGIALSTDEK-VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS 237 (333)
T ss_dssp -----------------EEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred -----------------EeecCCCcccceEECCCCC-EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCc
Confidence 1112334578899999982 2445556688999999864 3333211 11 236788
Q ss_pred EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC
Q psy10867 232 VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD 300 (343)
Q Consensus 232 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 300 (343)
++++++|+++++...++.|.+||... .....+.. .....+|...+.+++|+||++.|+.++.+
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~~g-~~~~~~~~-----~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNKRG-YPIGQILI-----PGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTTS-CEEEEEEC-----TTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred eEECCCCCEEEEEcCCCEEEEECCCC-CEEEEEEc-----CCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99999999887777788999998742 22111100 00001222368899999998777655554
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.87 E-value=2.7e-19 Score=147.25 Aligned_cols=240 Identities=10% Similarity=0.078 Sum_probs=162.8
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC---C--eEEEEeCCCcccceecccCCcceEEEEECC
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK---P--MIQAWPVNSQEKAQLRLICPGRISSMQASP 88 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~ 88 (343)
++.|.+||+.+++... + . .+..++|+|||+.++....+ + .|.+|++.+++....... .. +..++|+|
T Consensus 42 ~~~l~~~d~~~~~~~~-l----~-~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wsp 113 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I----E-NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNE 113 (347)
T ss_dssp EEEEEEEETTTCCEEE-E----E-SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECT
T ss_pred cceEEEEeCCCCceEE-c----c-cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECC
Confidence 5689999998876533 3 3 77899999999777665432 2 478888888776554433 33 99999999
Q ss_pred CCCEEEEe-cC---------------------------CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC
Q psy10867 89 DAAYIAVS-IE---------------------------TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED 140 (343)
Q Consensus 89 ~~~~l~~~-~d---------------------------~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 140 (343)
||+.|+.. .+ ..|++||+.+++.+..+.. . .+..+.|+|++ +++++..+
T Consensus 114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 99988863 22 4799999988876455544 3 78899999999 77777554
Q ss_pred C-------eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-------
Q psy10867 141 G-------TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD------- 206 (343)
Q Consensus 141 g-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------- 206 (343)
+ ...+|.+.++. ...+..+ ..+..+ +|++ +.|+.++.+
T Consensus 191 ~~~~~~~~~~~l~~~d~~~-----------------------~~~l~~~-~~~~~~--spdg--~~l~~~~~~~~~~~~~ 242 (347)
T 2gop_A 191 EIIPQYFKFWDIYIWEDGK-----------------------EEKMFEK-VSFYAV--DSDG--ERILLYGKPEKKYMSE 242 (347)
T ss_dssp CSSCCSSCCEEEEEEETTE-----------------------EEEEEEE-ESEEEE--EECS--SCEEEEECCSSSCCCS
T ss_pred cccccccccccEEEeCCCc-----------------------eEEeccC-cceeeE--CCCC--CEEEEEEccccCCccc
Confidence 2 34445443321 1112223 444444 8998 667666543
Q ss_pred -CeEEEEecCCCceEEEee-cCCcEEE-EEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE
Q psy10867 207 -RTCKIFDLCTGEDLLSLI-LDTRLTC-VAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT 283 (343)
Q Consensus 207 -~~i~~wd~~~~~~~~~~~-~~~~i~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 283 (343)
..|.+|| +++...... +...+.. +.|+ ++ .+++++.++.+++| +... . ...+..+...|.
T Consensus 243 ~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~-----------~~~~~~~~~~v~ 305 (347)
T 2gop_A 243 HNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-E-----------IKPIAKGRHWIM 305 (347)
T ss_dssp SCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-S-----------EEEEECSSSEEE
T ss_pred cceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-c-----------eEEEecCCCeEE
Confidence 4688888 555433222 3556776 8999 88 88889999999999 8732 1 112333467899
Q ss_pred EEEEccCCCEEEEEeCCCcE-EEEecccce
Q psy10867 284 SLSCSITGITLLSSSADETL-KIWHTISRQ 312 (343)
Q Consensus 284 ~~~~s~~~~~l~s~~~dg~i-~iwd~~~~~ 312 (343)
+++|+| .++++++.++.. .+|.+. ++
T Consensus 306 ~~~~s~--~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 306 GFDVDE--IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp EEEESS--SEEEEEECSSSCCEEEEES-SS
T ss_pred eeeeeC--cEEEEEcCCCChHHheEeC-Cc
Confidence 999999 677777777665 777776 54
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=1.1e-19 Score=149.85 Aligned_cols=255 Identities=10% Similarity=0.009 Sum_probs=171.6
Q ss_pred CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEEccCCceEEEeccc------C
Q psy10867 57 KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQISSGRLLATASSH------Y 119 (343)
Q Consensus 57 ~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~~~~~~~~~~~~~~------~ 119 (343)
|+.|.+||..+++.+..+..+..+ .++|+||+++++++. ++.|.+||+.+++.+..+... .
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 579999999998877665555444 899999999888742 467999999999888777532 2
Q ss_pred CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeee-eecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867 120 QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196 (343)
Q Consensus 120 ~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 196 (343)
.....++++|++++|+++.. ++.|.+||+.+.+.... +. .. ....+.+.|++.
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-----------------------~~-~~~~v~~~p~~~ 163 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-----------------------AA-GCWSVIPQPNRP 163 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-----------------------GT-TEEEEEECTTSS
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-----------------------CC-CcceeEEcCCCC
Confidence 45678999999999998864 58999999998754433 21 11 122355677764
Q ss_pred ceEEEEeeCCCeEEEEecCC-CceEEEe------ecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC
Q psy10867 197 KSRVASVSHDRTCKIFDLCT-GEDLLSL------ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS 269 (343)
Q Consensus 197 ~~~l~~~~~d~~i~~wd~~~-~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 269 (343)
..+++.+.||.+.+|++.. ++..... ........+.++|++..++..+.++.|.++|+..............
T Consensus 164 -~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~ 242 (361)
T 2oiz_A 164 -RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLL 242 (361)
T ss_dssp -SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESC
T ss_pred -eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceeccccccc
Confidence 5778888999999998865 5444221 1111122334467777777778889999999864321100000000
Q ss_pred CC-CCccccccCcEEEEEEccCCCEEEEEeC-----------CCcEEEEecccceeeeecccCCceEEEEEccCCCeeee
Q psy10867 270 TS-NPDFIGHEKQVTSLSCSITGITLLSSSA-----------DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 270 ~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 337 (343)
.. .............++|+|+++.++.+.. .+.|.+||+.+++.+.++.... +.+++|+|||++|++
T Consensus 243 ~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v 321 (361)
T 2oiz_A 243 NDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLT 321 (361)
T ss_dssp CHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEE
T ss_pred CccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEE
Confidence 00 0000000111123789999887776543 3479999999999999998444 999999999999998
Q ss_pred cc
Q psy10867 338 YD 339 (343)
Q Consensus 338 ~~ 339 (343)
++
T Consensus 322 ~n 323 (361)
T 2oiz_A 322 LD 323 (361)
T ss_dssp EC
T ss_pred eC
Confidence 76
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=2.2e-18 Score=140.52 Aligned_cols=220 Identities=10% Similarity=0.093 Sum_probs=166.5
Q ss_pred CeEEEEecCCceEEEEEec-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-cceec---------ccCCcceEE
Q psy10867 15 GAISVWEPKGGTLLMSYKG-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-KAQLR---------LICPGRISS 83 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-~~~~~---------~~~~~~v~~ 83 (343)
+.|.+||..+++.+..+.. +.. .+..++++|+|.++++...++.|++|+.+... .+..+ ..+......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~-~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFY-LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCS-SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CcEEEEECCCCeEEeccCCCccC-CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 3699999988998877653 334 78999999999999998888999999986552 23322 233446899
Q ss_pred EEECC-CCCEEEEe--cCCeEEEEEccCCceEEEeccc----------CCCeEEEEEecC-CCEEEEecCCCeEEEeecC
Q psy10867 84 MQASP-DAAYIAVS--IETKLHMWQISSGRLLATASSH----------YQPITIVKWSAD-SNFIVTGGEDGTICVWQLS 149 (343)
Q Consensus 84 ~~~s~-~~~~l~~~--~d~~i~v~~~~~~~~~~~~~~~----------~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~ 149 (343)
++++| ++.++++. .++.|++|+ .+++.+..+... ......++++|+ +.++++...++.|++||..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 99999 78888885 488999999 567777766422 234889999998 7778888889999999998
Q ss_pred ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec------CCCceEEEEeeCCCeEEEEecCCCceEEEe
Q psy10867 150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK------LGAKSRVASVSHDRTCKIFDLCTGEDLLSL 223 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 223 (343)
+++....+. ...+...+..++++| ++ ...++...+..+++||..+++.+..+
T Consensus 227 ~G~~~~~~~--------------------~~~~~~~~~~~~~~pg~~~~~~g--~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 227 TKEFVREIK--------------------HASFGRNVFAISYIPGFLFAVNG--KPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TCCEEEEEC--------------------CTTTTTCEEEEEEETTEEEEEEC--CCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCcEEEEEe--------------------ccccCCCcceeeecCCEEEEeCC--CEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 665444331 123556678888888 33 22333344568999999999998887
Q ss_pred e----cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867 224 I----LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 224 ~----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 258 (343)
. +...+..++++|+|..+++...++.|++|++...
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 4 4456899999999977788888999999998763
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=2.3e-19 Score=147.71 Aligned_cols=244 Identities=9% Similarity=0.030 Sum_probs=162.9
Q ss_pred cceEEEEeCCceEEEEEc---------CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC---C--eEE
Q psy10867 38 SPHSMCLLGNDYVLGVEK---------GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE---T--KLH 102 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~---------~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d---~--~i~ 102 (343)
.+..+++ ||+.++... .++.|.+|++.+++.... ..+..++|+|||+.|+. +.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4566677 665554431 136799999988765433 56889999999998886 322 3 488
Q ss_pred EEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC---------------------------CeEEEeecCccceee
Q psy10867 103 MWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED---------------------------GTICVWQLSRLICKQ 155 (343)
Q Consensus 103 v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~iwd~~~~~~~~ 155 (343)
+|++.+++.......+ . +..++|+|+++.|+.++.+ ..|.+||+.+++...
T Consensus 89 ~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 8898887765554433 3 9999999999988887632 568889988764311
Q ss_pred eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC------C-eEEEEecCCCceEEEeecCCc
Q psy10867 156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD------R-TCKIFDLCTGEDLLSLILDTR 228 (343)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~-~i~~wd~~~~~~~~~~~~~~~ 228 (343)
.+.. . .+..+.|+|++ +++++..+ . ...+|.+.+++......+ ..
T Consensus 167 ----------------------~l~~-~-~~~~~~~spdg---~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~ 218 (347)
T 2gop_A 167 ----------------------EFEK-P-RFSSGIWHRDK---IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VS 218 (347)
T ss_dssp ----------------------EEEE-E-TTCEEEEETTE---EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ES
T ss_pred ----------------------eecC-C-CcccccCCCCe---EEEEEecccccccccccccEEEeCCCceEEeccC-cc
Confidence 2222 2 67889999987 55555443 2 334444435544333333 44
Q ss_pred EEEEEEcCCCCEEEEEcCC--------CcEEEEEeecccccccccccCCCCCCccccccCcEEE-EEEccCCCEEEEEeC
Q psy10867 229 LTCVAFDGTEDNIYMGTSE--------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTS-LSCSITGITLLSSSA 299 (343)
Q Consensus 229 i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~ 299 (343)
+..+ +|+|++|+.++.+ ..|++|| .... .....++...+.. +.|+ |+ ++++++.
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-----------~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-----------MGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-----------EESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-----------EeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 4444 9999988877644 3677777 2211 1123345667876 8999 88 8899999
Q ss_pred CCcEEEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867 300 DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 300 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 338 (343)
++.+++| +.+++....+.+.+.|.+++|+| ..++++
T Consensus 282 ~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~ 317 (347)
T 2gop_A 282 EGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLK 317 (347)
T ss_dssp TTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEE
T ss_pred CCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEE
Confidence 9999999 88666654445677899999999 555544
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.86 E-value=8e-19 Score=138.86 Aligned_cols=244 Identities=14% Similarity=0.043 Sum_probs=182.3
Q ss_pred CceEEEEEcCCCeEEEEeCCCcccceecccCC-cceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccC-CCeEE
Q psy10867 47 NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICP-GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHY-QPITI 124 (343)
Q Consensus 47 ~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~-~~v~~ 124 (343)
.++++++++.++.|.+||.++++.+..+..+. ..+.++.++|+|++++ +.++.|+.||. +|+.+..+..+. ..+.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 35777788888999999999999886665554 4788999999999999 56788999998 899998887653 47889
Q ss_pred EEEecCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe
Q psy10867 125 VKWSADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV 203 (343)
Q Consensus 125 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 203 (343)
+.+.++|+.+++.+. ++.|..+|. +++....+... .....+......+++.+++ +++++.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~----------------~~~~~~~~~~~~v~~~~~G--~~lv~~ 142 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE----------------TGIERPHAQFRQINKNKKG--NYLVPL 142 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC----------------CSCSSGGGSCSCCEECTTS--CEEEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc----------------CCCCcccccccCceECCCC--CEEEEe
Confidence 999999999999877 788888886 45554443311 0001122344556778888 799999
Q ss_pred eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcE
Q psy10867 204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQV 282 (343)
Q Consensus 204 ~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 282 (343)
..++.|..||.+ |+.+.++.....+..+...++++.++++..++.|..+|..+++...++... .+.+ .-..+
T Consensus 143 ~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~------~~~~~~l~~~ 215 (276)
T 3no2_A 143 FATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN------DIEGVQLFFV 215 (276)
T ss_dssp TTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG------GSBSCCCSEE
T ss_pred cCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC------CCCCcccccc
Confidence 999999999987 999999987777778888999999999988889999998866654433210 0011 12347
Q ss_pred EEEEEccCCCEEEEEeCC--------CcEEEEec-ccceeeeecc
Q psy10867 283 TSLSCSITGITLLSSSAD--------ETLKIWHT-ISRQCLRTIQ 318 (343)
Q Consensus 283 ~~~~~s~~~~~l~s~~~d--------g~i~iwd~-~~~~~~~~~~ 318 (343)
..+...++|+++++.... +..+++++ .+|+.+.++.
T Consensus 216 ~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 216 AQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp EEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred ccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 888899999988877421 23456666 5788888876
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=8.2e-18 Score=134.51 Aligned_cols=219 Identities=11% Similarity=0.125 Sum_probs=160.2
Q ss_pred EEecCCCCeEEEEecCCceEEEEEec------CCCCcceEEEEe-CCceEEEEEcC-CCeEEEEeCCCcccceecc-cCC
Q psy10867 8 AFSYDGSGAISVWEPKGGTLLMSYKG------ASVLSPHSMCLL-GNDYVLGVEKG-KPMIQAWPVNSQEKAQLRL-ICP 78 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~~~~~~~-~~~i~iw~~~~~~~~~~~~-~~~ 78 (343)
.++...++.|.+||.. ++.+..+.. +.. .+..+++. +++.++++... ++.|.+|+. +++.+..+. .+.
T Consensus 44 ~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~-~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~ 120 (286)
T 1q7f_A 44 IVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLL-YPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATIL 120 (286)
T ss_dssp EEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBS-SEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTC
T ss_pred EEEECCCCEEEEECCC-CcEEEEecccCCCccccc-CceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEecCccC
Confidence 3333446889999976 666666643 224 67899994 78888888742 589999994 455444332 344
Q ss_pred cceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceee
Q psy10867 79 GRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ 155 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 155 (343)
..+..++++|+|+++++. .++.|.+|+. +++.+..+. .+...+..++++|+++++++...++.|++||.... .
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~-- 196 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-Y-- 196 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-E--
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC-E--
Confidence 578999999999988874 5789999996 466665553 34456899999999998888888899999997542 2
Q ss_pred eeecCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEeeCCC-eEEEEecCCCceEEEeec---CCcE
Q psy10867 156 TVAFGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVSHDR-TCKIFDLCTGEDLLSLIL---DTRL 229 (343)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~---~~~i 229 (343)
+..+. ++...+..+++++++ +++++...++ .|.+||. +++.+..+.. ...+
T Consensus 197 --------------------~~~~~~~g~~~~p~~i~~d~~G--~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 197 --------------------LRQIGGEGITNYPIGVGINSNG--EILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp --------------------EEEESCTTTSCSEEEEEECTTC--CEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred --------------------EEEEccCCccCCCcEEEECCCC--CEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 12222 223568899999998 7888877776 9999995 5666666653 2347
Q ss_pred EEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
..++++|+|+++++ +.++.|++|++..
T Consensus 254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 254 FDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred eeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 89999999986666 5799999998754
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.85 E-value=2.1e-18 Score=136.79 Aligned_cols=241 Identities=6% Similarity=-0.036 Sum_probs=170.6
Q ss_pred cceEEEEeCCceEEE-EEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867 38 SPHSMCLLGNDYVLG-VEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS 116 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~-~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~ 116 (343)
.+.++++++++.+++ +...++.|.+|+..+.........+...+..+++.++++++++..++.|.+||...........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 578899999998877 6466689999998765543322233456788999999997777668899999987654432222
Q ss_pred ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867 117 SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196 (343)
Q Consensus 117 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 196 (343)
.....+..+++.++++++++...++.|.+|+..+.... .........+..+++++++
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~~p~~i~~~~~g- 161 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT----------------------VLPFTGLNDPDGVAVDNSG- 161 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE----------------------ECCCCSCCSCCCEEECTTC-
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE----------------------eeccccCCCceeEEEeCCC-
Confidence 33356899999999998887777889999976543211 1111223457789999988
Q ss_pred ceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc
Q psy10867 197 KSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF 275 (343)
Q Consensus 197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 275 (343)
+++++...++.|.+||........... ....+..++++++|..+++...++.|.+||........ ..
T Consensus 162 -~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-----------~~ 229 (270)
T 1rwi_B 162 -NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-----------LP 229 (270)
T ss_dssp -CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-----------CC
T ss_pred -CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-----------ec
Confidence 677777778899999987665443222 22568999999999777777778899999876532111 11
Q ss_pred ccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee
Q psy10867 276 IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC 313 (343)
Q Consensus 276 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 313 (343)
..+...+.+++++++|+++++...++.|+++++...+.
T Consensus 230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 12235689999999999888988999999999876543
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.84 E-value=5e-18 Score=136.45 Aligned_cols=232 Identities=10% Similarity=-0.014 Sum_probs=165.1
Q ss_pred eecccCCcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecC
Q psy10867 72 QLRLICPGRISSMQASPDAA-YIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS 149 (343)
Q Consensus 72 ~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 149 (343)
..+..+.....+++|+|+++ ++++ ..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 33334556678999999998 5555 56789999999877 56666677789999999999988887778899999997
Q ss_pred ccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEE----ee-------------CCCeEEE
Q psy10867 150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVAS----VS-------------HDRTCKI 211 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~----~~-------------~d~~i~~ 211 (343)
+++..... .... .....+..++++|+| .++++ ++ ..+.|..
T Consensus 99 ~g~~~~~~-------------------~~~~~~~~~~~~~i~~d~~G--~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 99 GGEWESIA-------------------DSFEGKKLNSPNDVCLAPDG--SLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp TCCEEEEE-------------------CEETTEECCCCCCEEECTTS--CEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred CCcEEEEe-------------------eccCCCCCCCCCCEEECCCC--CEEEECCccccccccccccccccCCCcEEEE
Confidence 76432211 0011 112356789999998 67776 33 1346666
Q ss_pred EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc-ccccccCCCCCCccccccCcEEEEEEccC
Q psy10867 212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT-RDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
++.. ++.............++|+|+++.+++.+.++.|++|++...... ... ..+..+...+..++++++
T Consensus 158 ~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~--------~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 158 LAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQG--------VHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp ECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEE--------EEECCSSSCCCSEEEBTT
T ss_pred ECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCC--------eEeeCCCCCCCeEEECCC
Confidence 7655 554433345566889999999999977788899999998732111 000 011123455678999999
Q ss_pred CCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEE-ccCCCeeeecc
Q psy10867 291 GITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFL-GLLPPAIHDYD 339 (343)
Q Consensus 291 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~-sp~~~~l~~~~ 339 (343)
|+++++. ++.|.+||.. ++.+..+. +.. +.+++| +|+++.|++++
T Consensus 229 G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 229 GLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp SCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred CCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence 9876666 7899999986 78887777 555 999999 68999888765
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.84 E-value=4.4e-18 Score=136.75 Aligned_cols=243 Identities=12% Similarity=0.034 Sum_probs=171.2
Q ss_pred ceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-CCeEE
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-ETKLH 102 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-d~~i~ 102 (343)
+..+..+..+.. ...+++|+|++. +++++..++.|..|+..++ ...+..+...+.+++++|+|+++++.. ++.|.
T Consensus 17 ~~~~~~l~~~~~-~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 17 GAEARRLADGFT-WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TCCCEEEECCCS-SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCcEEEEecCCc-cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 344455555555 778999999997 7888877799999999887 444445667899999999999888754 58999
Q ss_pred EEEccCCceEEEeccc----CCCeEEEEEecCCCEEEE----ec-------------CCCeEEEeecCccceeeeeecCC
Q psy10867 103 MWQISSGRLLATASSH----YQPITIVKWSADSNFIVT----GG-------------EDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 103 v~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s----~~-------------~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
+||..+++........ ...+..++++|+|+++++ |+ ..+.|..++.. +
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g---------- 162 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G---------- 162 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----------
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C----------
Confidence 9999888765443321 234678999999998887 33 12455555554 2
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-CCce---EEEee-cCCcEEEEEEcC
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TGED---LLSLI-LDTRLTCVAFDG 236 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~---~~~~~-~~~~i~~~~~~~ 236 (343)
....+..+......++|+|++ +.+++.+.++.|.+||+. +++. ...+. ....+..+++++
T Consensus 163 -------------~~~~~~~~~~~~~gi~~s~dg--~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 163 -------------TLSAPIRDRVKPNGLAFLPSG--NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA 227 (296)
T ss_dssp -------------CEEEEECCCSSEEEEEECTTS--CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred -------------CEEEeecCCCCCccEEECCCC--CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence 122223455667899999999 666778888999999987 4544 22221 234567899999
Q ss_pred CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE-ccCCCEEEEEeCCCcEEEEecccce
Q psy10867 237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC-SITGITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 237 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~~ 312 (343)
+|+++++. ++.|.+||... .. +..+..+.. +++++| +|+++.|++++.+ .+.-++..+.+
T Consensus 228 ~G~l~v~~--~~~v~~~~~~g-~~-----------~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 228 GGLIWASA--GDGVHVLTPDG-DE-----------LGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRG 288 (296)
T ss_dssp TSCEEEEE--TTEEEEECTTS-CE-----------EEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCB
T ss_pred CCCEEEEc--CCeEEEECCCC-CE-----------EEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccccc
Confidence 99866655 88899998752 21 223444555 889999 5899988888876 34455555544
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=3.6e-16 Score=125.64 Aligned_cols=265 Identities=7% Similarity=-0.034 Sum_probs=188.8
Q ss_pred cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec-ccCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCc
Q psy10867 33 GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR-LICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGR 110 (343)
Q Consensus 33 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~ 110 (343)
.+.. .+.++++.++|.+.++...++.|.+||.. ++..... ......+..+++.+++.++++.. ++.|..|+.. ++
T Consensus 12 ~~~~-~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 12 NQDT-GPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSSC-CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCC-CccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 3445 88999999999988887766899999988 5543322 23456789999999999888754 7889999976 44
Q ss_pred eE-EEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867 111 LL-ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189 (343)
Q Consensus 111 ~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 189 (343)
.. ..+......+.++++.++++++++...++.|..||. ++.... .........+..+
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~---------------------~~~~~~~~~~~~i 146 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE---------------------YELPNKGSYPSFI 146 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE---------------------EECSSTTCCEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE---------------------ecCCCCCCCCceE
Confidence 32 222234557899999999988888777889999998 432211 1112234568899
Q ss_pred EeecCCCceEEEEeeCCCeEEEEecCCCceEEE-ee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867 190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-LI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ 267 (343)
Q Consensus 190 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 267 (343)
++.+++ .++++...++.|..||. +++.... .. ....+..++++++++..++...++.|.+||. ..... ..
T Consensus 147 ~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~--- 218 (299)
T 2z2n_A 147 TLGSDN--ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EF--- 218 (299)
T ss_dssp EECTTS--CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EE---
T ss_pred EEcCCC--CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EE---
Confidence 999988 67777777889999998 6665432 12 2446889999999997777767889999987 33211 11
Q ss_pred CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee-cc-cCCceEEEEEccCCCeeeec
Q psy10867 268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT-IQ-HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~ 338 (343)
....+...+.+++++++|+++++...++.|..||. +++.... +. ....+.++++ ++++..++.
T Consensus 219 ------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 219 ------KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp ------ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEE
T ss_pred ------ECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEe
Confidence 12234467899999999997777667889999998 4543222 22 4567899999 888877664
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.83 E-value=2.5e-16 Score=129.94 Aligned_cols=272 Identities=11% Similarity=-0.006 Sum_probs=183.2
Q ss_pred eEEEecCC--CC---eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCccc
Q psy10867 6 EVAFSYDG--SG---AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEK 70 (343)
Q Consensus 6 ~~~~s~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~ 70 (343)
..+|..+. .+ .|.++|..+++.+.++..... + .++++||++.+..+. .++.|.+||..+.+.
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 44566664 33 889999999999988886553 3 999999998877764 347899999988776
Q ss_pred ceecccC-------CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEE-ecccCCCeEEEEEecCC-CEEEEec
Q psy10867 71 AQLRLIC-------PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADS-NFIVTGG 138 (343)
Q Consensus 71 ~~~~~~~-------~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~~ 138 (343)
+...... ......++|+|||++|+++ . ++.|.++| .+++.+.. +... + ++.+.|++ +.+++.+
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~ 184 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLC 184 (373)
T ss_pred EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEc
Confidence 6433211 1234589999999998863 2 47899999 99988877 6432 2 24555655 4566777
Q ss_pred CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc-eEEEEeecCCCceEEEEeeCCCeEEEEecCCC
Q psy10867 139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP-VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG 217 (343)
Q Consensus 139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 217 (343)
.||.+.++|. +++...... ..... ....+ .....+.+++. .+++ .+..+.+.+.|+...
T Consensus 185 ~dg~~~~vd~-~g~~~~~~~----------------~~~~~-~~~~p~~~~~~~~~~~~-~~~~-~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 185 AQGGLAKTDH-AGGAAGAGL----------------VGAML-TAAQNLLTQPAQANKSG-RIVW-PVYSGKILQADISAA 244 (373)
T ss_pred CCCCEEEEEC-CCcEEEEEe----------------ccccc-cCCcceeecceeEecCC-EEEE-EcCCceEEEEeccCC
Confidence 8999999999 664432110 00000 11112 12345666653 3333 346789999998755
Q ss_pred c--eEEEeec-----------CCcEEEEEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCc
Q psy10867 218 E--DLLSLIL-----------DTRLTCVAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPD 274 (343)
Q Consensus 218 ~--~~~~~~~-----------~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 274 (343)
. .+..+.. +.....+.++|+++.++++.. ++.|.++|+.+.+....
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~----------- 313 (373)
T 2mad_H 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ----------- 313 (373)
T ss_pred cceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE-----------
Confidence 3 2222221 233445889999998888653 35799999987655332
Q ss_pred cccccCcEEEEEEccCCC-EEEEEe-CCCcEEEEecccceeeeec
Q psy10867 275 FIGHEKQVTSLSCSITGI-TLLSSS-ADETLKIWHTISRQCLRTI 317 (343)
Q Consensus 275 ~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 317 (343)
+. -.....+++|+|||+ +++++. .++.|.++|+.+++.+.++
T Consensus 314 i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 314 IS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 22 123578999999999 777776 5899999999999999884
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.83 E-value=5.9e-18 Score=152.23 Aligned_cols=229 Identities=12% Similarity=0.069 Sum_probs=160.2
Q ss_pred CCcceEEEEECCCCCEEEEe--cCC----eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe--------
Q psy10867 77 CPGRISSMQASPDAAYIAVS--IET----KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT-------- 142 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~~--~d~----~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-------- 142 (343)
+...+..++|||||++||.+ .+| .|++||+.+++.+.....+. .+..++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccc
Confidence 34468899999999999852 223 89999999998765432222 2678999999999999887765
Q ss_pred --------EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-----CCeE
Q psy10867 143 --------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-----DRTC 209 (343)
Q Consensus 143 --------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----d~~i 209 (343)
|++|++.++..... .+.....+...+..+.|+|++ ++|+..+. +..|
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~------------------~v~~~~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~~~l 261 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDI------------------LCAEFPDEPKWMGGAELSDDG--RYVLLSIREGCDPVNRL 261 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCE------------------EEECCTTCTTCEEEEEECTTS--CEEEEEEECSSSSCCEE
T ss_pred cccCCCCEEEEEECCCCcccce------------------EEeccCCCCeEEEEEEEcCCC--CEEEEEEEccCCCccEE
Confidence 99999987542111 122222345567899999999 67766554 6789
Q ss_pred EEEecCC------Cc-eEEEee-cCCcEEEEEEcCCCCEEEEEcCC----CcEEEEEeecccccccccccCCCCCCcccc
Q psy10867 210 KIFDLCT------GE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTSE----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIG 277 (343)
Q Consensus 210 ~~wd~~~------~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 277 (343)
++||+.+ ++ ....+. +...+.. .|+|+|+.|+..+.. +.|.+||+....... ...+..
T Consensus 262 ~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~---------~~~l~~ 331 (710)
T 2xdw_A 262 WYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK---------WKVLVP 331 (710)
T ss_dssp EEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG---------CEEEEC
T ss_pred EEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc---------ceeccC
Confidence 9999986 53 234443 3333433 588999988776543 368999987643110 122333
Q ss_pred ccC--cEEEEEEccCCCEEEEEeCCCc--EEEEecccceeeeecc-cCCceEEEEEccCCCeee
Q psy10867 278 HEK--QVTSLSCSITGITLLSSSADET--LKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 278 ~~~--~v~~~~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~ 336 (343)
|.. .+..++|++++.++++...|+. |++|++.+|+.+..+. +.+.+..+.++|+++.|+
T Consensus 332 ~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 332 EHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp CCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred CCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 433 6888999988888889888884 5667776787777777 677889999999998766
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.83 E-value=4.5e-17 Score=128.83 Aligned_cols=211 Identities=7% Similarity=-0.049 Sum_probs=166.0
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC-CcceEE
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC-PGRISS 83 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~-~~~v~~ 83 (343)
..++++.++++.|.+||.++|+.+.++..+....+.+++++|+|+++++ . ++.|..||. +++.+..+..+ ...+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~-~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y-SKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE-C-BSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe-C-CCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 4788999999999999999999999999876227899999999999984 3 478999999 67777555443 357889
Q ss_pred EEECCCCCEEEEe-c-CCeEEEEEccCCceEEEecc------cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceee
Q psy10867 84 MQASPDAAYIAVS-I-ETKLHMWQISSGRLLATASS------HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ 155 (343)
Q Consensus 84 ~~~s~~~~~l~~~-~-d~~i~v~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 155 (343)
+.+.++|+++++. . ++.|..++. +|+.+..+.. +......+.+.++++++++...++.|..||.. ++...
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 9999999999984 4 567888885 6777766541 22234566788999999999999999999998 76655
Q ss_pred eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-------Cc
Q psy10867 156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-------TR 228 (343)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------~~ 228 (343)
++. . ...+.++...+++ +++++++.++.|..+|..+++.+.++... ..
T Consensus 160 ~~~----------------------~-~~~~~~~~~~~~g--~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~ 214 (276)
T 3no2_A 160 SVK----------------------L-SGTPFSSAFLDNG--DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFF 214 (276)
T ss_dssp EEE----------------------C-SSCCCEEEECTTS--CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSE
T ss_pred EEE----------------------C-CCCccceeEcCCC--CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccc
Confidence 442 1 1345567778888 78888888889999999999999998631 12
Q ss_pred EEEEEEcCCCCEEEEEc
Q psy10867 229 LTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 229 i~~~~~~~~~~~l~~~~ 245 (343)
+..++..++|+.+++..
T Consensus 215 ~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 215 VAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred cccceEcCCCCEEEEec
Confidence 78889999999888873
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.83 E-value=6.5e-18 Score=151.95 Aligned_cols=239 Identities=10% Similarity=-0.024 Sum_probs=161.8
Q ss_pred cceEEEEeCCceEEEEEcCCC-----eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCe-----------
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKP-----MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETK----------- 100 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~-----~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~----------- 100 (343)
.+..++|||||++++.+.+++ .|++||+.+++.......+ ..+..++|+|||+.|+. +.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 578999999998877654432 8999999998876533222 23678999999998885 44433
Q ss_pred -----EEEEEccCCc----eEEEecccCCCeEEEEEecCCCEEEEecC-----CCeEEEeecCc------cceeeeeecC
Q psy10867 101 -----LHMWQISSGR----LLATASSHYQPITIVKWSADSNFIVTGGE-----DGTICVWQLSR------LICKQTVAFG 160 (343)
Q Consensus 101 -----i~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~~~~ 160 (343)
|++|++.++. .+.....|...+..+.|+|||++|+.++. +..|.+||+.+ +..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~------- 277 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL------- 277 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-------
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-------
Confidence 9999998875 22222335566889999999999887764 56899999876 311
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC----CCeEEEEecCCCce--EEEe-ecCC--cEEE
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----DRTCKIFDLCTGED--LLSL-ILDT--RLTC 231 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~--~~~~-~~~~--~i~~ 231 (343)
....+..+...+.. .|+|++ ..|+..+. .+.|.+||+.+++. ...+ .+.. .+..
T Consensus 278 --------------~~~~l~~~~~~~~~-~~s~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 340 (710)
T 2xdw_A 278 --------------KWVKLIDNFEGEYD-YVTNEG--TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEW 340 (710)
T ss_dssp --------------CCEEEECSSSSCEE-EEEEET--TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEE
T ss_pred --------------ceEEeeCCCCcEEE-EEeccC--CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEE
Confidence 12223344444444 478888 44544433 34699999987742 2333 3333 6888
Q ss_pred EEEcCCCCEEEEEcCCCcE--EEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEE-e---CCCcEEE
Q psy10867 232 VAFDGTEDNIYMGTSEGVI--KSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS-S---ADETLKI 305 (343)
Q Consensus 232 ~~~~~~~~~l~~~~~d~~i--~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~---~dg~i~i 305 (343)
++|++++.++++...++.. ++||+..... +..+..+...+..+.++|+++.++.. + ..+.|+.
T Consensus 341 ~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~-----------~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 409 (710)
T 2xdw_A 341 VACVRSNFLVLCYLHDVKNTLQLHDLATGAL-----------LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYH 409 (710)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEETTTCCE-----------EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEE
T ss_pred EEEEcCCEEEEEEEECCEEEEEEEECCCCCE-----------EEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEE
Confidence 9999877888888888855 4555433321 22344456778899999998766532 2 3478999
Q ss_pred Eecccce
Q psy10867 306 WHTISRQ 312 (343)
Q Consensus 306 wd~~~~~ 312 (343)
||+.+++
T Consensus 410 ~d~~tg~ 416 (710)
T 2xdw_A 410 CDLTKEE 416 (710)
T ss_dssp EETTSSS
T ss_pred EECCCCc
Confidence 9998876
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.82 E-value=8.2e-18 Score=136.91 Aligned_cols=279 Identities=13% Similarity=0.076 Sum_probs=192.3
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC------
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC------ 77 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~------ 77 (343)
++.|.+.|..+++.+.++..... + . ++++|||+.+..+. .++.|.+||..+.+.+......
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~ 134 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL 134 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc
Confidence 57999999999999999987665 4 4 99999997665543 3468999999998877554321
Q ss_pred -CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc-cc
Q psy10867 78 -PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR-LI 152 (343)
Q Consensus 78 -~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~ 152 (343)
......++|+|||+++.++ . ++.|.++|+.+++.+.++.... . ...+....+.+++.+.||++.+.++.+ ++
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 1245678999999988863 2 5899999999999988885321 1 223333456777888899999999876 33
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceE-EEEee-cCCCceEEEEeeCCCeEEEEecCCCce--EEEee----
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLS-KLGAKSRVASVSHDRTCKIFDLCTGED--LLSLI---- 224 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~---- 224 (343)
...... ..+.....++. ...|. +++ ++++ .+.+|.+.+.|+.+... ...+.
T Consensus 212 v~~~~~------------------~~~~~~~~~~~~~~~~~~~dG--~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 212 PEITHT------------------EVFHPEDEFLINHPAYSQKAG--RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp CEEEEC------------------CCCSCTTSCBCSCCEEETTTT--EEEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred EEEeec------------------ceeccccccccccceeEcCCC--cEEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence 221100 00001111111 23554 555 4444 55589999999876542 22221
Q ss_pred -------cCCcEEEEEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867 225 -------LDTRLTCVAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC 287 (343)
Q Consensus 225 -------~~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (343)
.......++++|+++.+++... .+.|.++|+.+.+....+ . -...+.+|++
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i-----------~-vg~~~~~lav 338 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-----------E-MGHEIDSINV 338 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE-----------E-EEEEECEEEE
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEE-----------E-CCCCcceEEE
Confidence 1223345778999999988753 257999999887654432 1 1236789999
Q ss_pred ccCCC-EEEEE-eCCCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867 288 SITGI-TLLSS-SADETLKIWHTISRQCLRTIQHKGPVLGAFLGLL 331 (343)
Q Consensus 288 s~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 331 (343)
++|++ +|++. ..++.|.++|..+++.+.++...+....+.+++|
T Consensus 339 s~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 339 SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp CSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 99997 66654 4589999999999999999997777788888877
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.82 E-value=5.8e-18 Score=151.86 Aligned_cols=241 Identities=7% Similarity=-0.070 Sum_probs=160.9
Q ss_pred CCCCcceEEEEeCCceEEE-----EEcCCCeEEEEeCCCcccc-eecccCCcceEEEEECCCCCEEEE-ecCCe------
Q psy10867 34 ASVLSPHSMCLLGNDYVLG-----VEKGKPMIQAWPVNSQEKA-QLRLICPGRISSMQASPDAAYIAV-SIETK------ 100 (343)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~~-----~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~------ 100 (343)
|.. .+..++|||||++++ .|+++..|++||+.+++.+ ..... ......++|+|||+.|+. +.+..
T Consensus 119 ~~~-~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 119 GTV-SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SCE-EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS-CCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCE-EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC-cccccceEEecCCCEEEEEEecCCCCCccc
Confidence 443 688999999998888 3444468999999998865 21111 111268999999998886 45444
Q ss_pred -------EEEEEccCCc----eEEEecccCCCeEEEEEecCCCEEEEecCCC----eEEEeecCccceeeeeecCCCCCC
Q psy10867 101 -------LHMWQISSGR----LLATASSHYQPITIVKWSADSNFIVTGGEDG----TICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 101 -------i~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
|++|++.++. ++.....+...+..+.|+|||++|+.++.++ .|.+|+..++.
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~------------- 263 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD------------- 263 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-------------
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-------------
Confidence 9999998875 3333444556789999999999988877665 67777654431
Q ss_pred CCccccccceeeeecccccceEEEEeecCCCceEEEEee---CCCeEEEEecCCCce---EEEeec--CCcEEEEEEcCC
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS---HDRTCKIFDLCTGED---LLSLIL--DTRLTCVAFDGT 237 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~---~~~~~~--~~~i~~~~~~~~ 237 (343)
...+..+...+....+ +++ .+++... .++.|.+||+.+++. ...+.+ ...+..++++ +
T Consensus 264 ----------~~~l~~~~~~~~~~~~-~~g--~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~ 329 (695)
T 2bkl_A 264 ----------FRLLVKGVGAKYEVHA-WKD--RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G 329 (695)
T ss_dssp ----------CEEEEECSSCCEEEEE-ETT--EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred ----------eEEeecCCCceEEEEe-cCC--cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C
Confidence 2222334445555555 677 5333333 258899999987753 333333 3457888888 6
Q ss_pred CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccc-cCcEEEEEEccCCCEEEE----EeCCCcEEEEecccce
Q psy10867 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH-EKQVTSLSCSITGITLLS----SSADETLKIWHTISRQ 312 (343)
Q Consensus 238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s----~~~dg~i~iwd~~~~~ 312 (343)
+.++++...|+..++|.+...... ...+..+ ...+..++++|+++.++. ....+.|++||+.+++
T Consensus 330 ~~lv~~~~~dg~~~l~~~~~~g~~----------~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 330 GHLSLEYLKDATSEVRVATLKGKP----------VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TEEEEEEEETTEEEEEEEETTCCE----------EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CEEEEEEEECCEEEEEEEeCCCCe----------eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 777888888999888877631110 1122223 556778889999887662 2335789999998775
Q ss_pred e
Q psy10867 313 C 313 (343)
Q Consensus 313 ~ 313 (343)
.
T Consensus 400 ~ 400 (695)
T 2bkl_A 400 S 400 (695)
T ss_dssp E
T ss_pred E
Confidence 3
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.82 E-value=3.5e-17 Score=133.22 Aligned_cols=249 Identities=9% Similarity=-0.035 Sum_probs=173.8
Q ss_pred CCeEEEEeCCCcccceecc------cCCcceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEec
Q psy10867 57 KPMIQAWPVNSQEKAQLRL------ICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSA 129 (343)
Q Consensus 57 ~~~i~iw~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (343)
++.|.++|.++++...... ........+.+. +++++++ ..++.|.+||..+++.+.++.. ......+++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeC
Confidence 5899999999888664331 122346778775 3444444 5678999999999999888853 45688999999
Q ss_pred CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCe
Q psy10867 130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRT 208 (343)
Q Consensus 130 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~ 208 (343)
+++.+++...++.|.+||..+.+....+..+. ..+.......+++ .++ .++++.. .++.
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~-----------------~~~~~~~p~~i~~-~~~--~lyv~~~~~~~~ 153 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPD-----------------MDMESGSTEQMVQ-YGK--YVYVNCWSYQNR 153 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTT-----------------CCTTTCBCCCEEE-ETT--EEEEEECTTCCE
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCC-----------------ccccCCCcceEEE-ECC--EEEEEcCCCCCE
Confidence 88655555478999999999876554443110 0011123455666 344 4555544 4899
Q ss_pred EEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC----------CcEEEEEeecccccccccccCCCCCCccccc
Q psy10867 209 CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278 (343)
Q Consensus 209 i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 278 (343)
|.++|..+++....+........++++|+|++++++..+ +.|.++|..+........ +. .
T Consensus 154 v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~---------~~-~ 223 (328)
T 3dsm_A 154 ILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK---------FK-L 223 (328)
T ss_dssp EEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE---------CC-T
T ss_pred EEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe---------cC-C
Confidence 999999999988888876677889999999877766554 789999987654322111 11 1
Q ss_pred cCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee--cc-cCCceEEEEEccCCCeeeecc
Q psy10867 279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT--IQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 279 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
...+..++++|++++|+.+.. .|.+||..+++.... +. .......++++|++..|++++
T Consensus 224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 236789999999998887755 899999988876432 12 246789999999666666654
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.82 E-value=1.8e-16 Score=137.20 Aligned_cols=273 Identities=11% Similarity=0.002 Sum_probs=190.8
Q ss_pred eCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCCeEEEEEcc--CCceEEEecccCCC
Q psy10867 45 LGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQIS--SGRLLATASSHYQP 121 (343)
Q Consensus 45 ~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~~i~v~~~~--~~~~~~~~~~~~~~ 121 (343)
+|++.++++..+++.|.++|..+++.+..+.. ...+..+.|+|||+++.+ +.++.|.+||+. +++.+..+.... .
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~ 241 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-E 241 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-E
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-C
Confidence 35567888888889999999999987765533 345779999999998876 678899999996 788887776533 3
Q ss_pred eEEEEEe----cCCCEEEEecC-CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccccc-ceEEEEeecCC
Q psy10867 122 ITIVKWS----ADSNFIVTGGE-DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL-PVTHVTLSKLG 195 (343)
Q Consensus 122 v~~~~~~----~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 195 (343)
...++|+ |||++++++.. +++|.++|..+.+....+...... ......|.. .+..+..++++
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~------------~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT------------YDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC------------TTTCCEESCCCEEEEEECSSS
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc------------cccccccCCCceEEEEEcCCC
Confidence 6789999 69998887765 589999999988776655311000 000001222 57788888886
Q ss_pred CceEEEEeeCCCeEEEEecCCCceE--EEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCC
Q psy10867 196 AKSRVASVSHDRTCKIFDLCTGEDL--LSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSN 272 (343)
Q Consensus 196 ~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~ 272 (343)
+ .+++....+|.|.++|..+.+.+ ..+........+.|+|++++++++. .++.|.++|+.+.+...... +
T Consensus 310 ~-~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~------v 382 (567)
T 1qks_A 310 P-EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED------T 382 (567)
T ss_dssp S-EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE------C
T ss_pred C-EEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe------c
Confidence 5 66777778899999998876533 3334556688899999999987765 57899999998765433221 1
Q ss_pred CccccccCcEEEEEEccCCCEE-EEEe-CCCcEEEEeccc-------ceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867 273 PDFIGHEKQVTSLSCSITGITL-LSSS-ADETLKIWHTIS-------RQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 273 ~~~~~~~~~v~~~~~s~~~~~l-~s~~-~dg~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
..-..|.+.-..+ ++|++..+ +++. .++.|.++|..+ .+.++++. ....-..+..+|++++|.+..
T Consensus 383 gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 383 GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 0012243222222 58875544 4443 468999999987 66777777 333335578999999998865
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=2.2e-15 Score=121.06 Aligned_cols=256 Identities=7% Similarity=-0.045 Sum_probs=177.3
Q ss_pred CCeEEEEecCCceEEEEE-ecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEECCCCC
Q psy10867 14 SGAISVWEPKGGTLLMSY-KGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQASPDAA 91 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~ 91 (343)
++.|.+||.. ++..... ..+.. .+.++++++++.+.++...++.|..|+.. ++.... .......+..+++.++++
T Consensus 35 ~~~v~~~d~~-~~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~ 111 (299)
T 2z2n_A 35 ANMISCINLD-GKITEYPLPTPDA-KVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD 111 (299)
T ss_dssp TTEEEEECTT-CCEEEEECSSTTC-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC
T ss_pred CCcEEEEcCC-CCeEEecCCcccC-ceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC
Confidence 5789999987 5543322 22344 78999999999988888766889999986 332221 112455789999999998
Q ss_pred EEEEe-cCCeEEEEEccCCceEEE-ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867 92 YIAVS-IETKLHMWQISSGRLLAT-ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV 169 (343)
Q Consensus 92 ~l~~~-~d~~i~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
++++. .++.|.+||. +++.... ...+...+..+++.++++.+++...++.|..||. ++....
T Consensus 112 l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-------------- 175 (299)
T 2z2n_A 112 IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-------------- 175 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--------------
T ss_pred EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--------------
Confidence 88875 5789999998 6654432 2334567899999999988887777889999998 543211
Q ss_pred ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcC
Q psy10867 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTS 246 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~ 246 (343)
.........+..+++++++ .++++...++.|.+||. +++... +. ....+..++++++|+.+++...
T Consensus 176 -------~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 176 -------FKIPTPASGPVGITKGNDD--ALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp -------EECSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred -------eeCCCCCCcceeEEECCCC--CEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccC
Confidence 1112234567899999988 67777667889999998 666433 32 2356899999999986666667
Q ss_pred CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccce
Q psy10867 247 EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ 312 (343)
Q Consensus 247 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 312 (343)
++.|..||... ....+ .+..+...+.++++ ++++++++.. .+.|..++..+++
T Consensus 245 ~~~i~~~d~~g--~~~~~---------~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 245 ANKIGRLTSNN--IIEEY---------PIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp TTEEEEEETTT--EEEEE---------ECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CceEEEECCCC--ceEEE---------eCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 88999999732 11111 12233467899999 8888776655 5677777776543
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=1.9e-16 Score=125.40 Aligned_cols=228 Identities=8% Similarity=-0.032 Sum_probs=158.8
Q ss_pred eEEE-ecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEE
Q psy10867 6 EVAF-SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSM 84 (343)
Q Consensus 6 ~~~~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~ 84 (343)
.+.+ +...++.|.+||..++........+.. .+.++++++++.++++.. ++.|.+|+..+.............+..+
T Consensus 36 ~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i 113 (270)
T 1rwi_B 36 NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY-QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGL 113 (270)
T ss_dssp CEEEEECSSSCEEEEECC-----EECCCCSCC-SCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEE
T ss_pred CEEEEccCCCCcEEEecCCCcccceEeeCCcC-CcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcce
Confidence 3444 334567888888755443322223334 788999999998777776 5899999987665433322333578999
Q ss_pred EECCCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC
Q psy10867 85 QASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG 163 (343)
Q Consensus 85 ~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 163 (343)
++.++|+++++ ..++.|.+|+..+.............+.+++++++++++++...++.|.+||........
T Consensus 114 ~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------- 185 (270)
T 1rwi_B 114 AVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------- 185 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE--------
T ss_pred EECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe--------
Confidence 99999997777 457899999866554443333333467889999999977777778899999987653211
Q ss_pred CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEE
Q psy10867 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~ 242 (343)
....+...+..+++++++ .++++...++.|.+||........... ....+..++++++|+.++
T Consensus 186 --------------~~~~~~~~p~~i~~d~~g--~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 186 --------------LPFTDITAPWGIAVDEAG--TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp --------------CCCSSCCSEEEEEECTTC--CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEE
T ss_pred --------------ecccCCCCceEEEECCCC--CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEE
Confidence 111223567899999998 677777778999999986654433221 235689999999999888
Q ss_pred EEcCCCcEEEEEeeccc
Q psy10867 243 MGTSEGVIKSFCLRQVP 259 (343)
Q Consensus 243 ~~~~d~~i~i~d~~~~~ 259 (343)
+...++.|+++++...+
T Consensus 250 ~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEGGGTEEEEECCCGGG
T ss_pred EECCCCEEEEEcCCCcc
Confidence 88889999999987644
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.79 E-value=3.6e-16 Score=126.70 Aligned_cols=235 Identities=10% Similarity=0.017 Sum_probs=163.5
Q ss_pred cceEEEEeCCceEEEE-------EcCCCeEEEEeCCCcccceecc----cCCcceEEEEECCC-CCEEEEecCCeEEEEE
Q psy10867 38 SPHSMCLLGNDYVLGV-------EKGKPMIQAWPVNSQEKAQLRL----ICPGRISSMQASPD-AAYIAVSIETKLHMWQ 105 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~-------~~~~~~i~iw~~~~~~~~~~~~----~~~~~v~~~~~s~~-~~~l~~~~d~~i~v~~ 105 (343)
.+.+++|++++.++++ +..++.|.+|+..+++...... ++...+..++++++ +++++++..+.|.+||
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d 98 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEe
Confidence 6789999999988887 4555899999988776543322 14467899999999 8877776666899999
Q ss_pred ccCCceEEE-ecc----cCCCeEEEEEecCCCEEEEecCC---------------CeEEEeecCccceeeeeecCCCCCC
Q psy10867 106 ISSGRLLAT-ASS----HYQPITIVKWSADSNFIVTGGED---------------GTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 106 ~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
.. ++.... ... ....+.++++.++++++++...+ +.|..++.. ++..
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~----------- 165 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI----------- 165 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-----------
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-----------
Confidence 88 765443 221 12357899999999887776654 567777654 3211
Q ss_pred CCccccccceeeeecccccceEEEEee----cCCCceEE-EEeeCCCeEEEEecC-CCce-----EEEeecC--CcEEEE
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLS----KLGAKSRV-ASVSHDRTCKIFDLC-TGED-----LLSLILD--TRLTCV 232 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l-~~~~~d~~i~~wd~~-~~~~-----~~~~~~~--~~i~~~ 232 (343)
.+..+......++++ |++ +.+ ++...++.|.+||.+ +++. ...+... ..+..+
T Consensus 166 ------------~~~~~~~~~~~i~~~~~~d~dg--~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 166 ------------QVDTAFQFPNGIAVRHMNDGRP--YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp ------------EEEEEESSEEEEEEEECTTSCE--EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred ------------EeccCCCCcceEEEecccCCCC--CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 111233456788999 887 554 444568999999986 4432 1122212 568889
Q ss_pred EEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE-EEeCCCcEEEEeccc
Q psy10867 233 AFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTIS 310 (343)
Q Consensus 233 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~ 310 (343)
+++++|+++++...++.|.+||..+... ...+..+...+.+++|+|+++.|+ +...++.|..|++..
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~-----------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQP-----------KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBSC-----------SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCcE-----------eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999888877788999998764332 222334456789999999999554 555668899999864
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.78 E-value=1.2e-14 Score=116.85 Aligned_cols=261 Identities=7% Similarity=-0.055 Sum_probs=186.1
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCceEE-E
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGRLLA-T 114 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~~~~-~ 114 (343)
.+.++++.++|.+.++...++.|.+|+.. ++.... .......+..+++.+++.++++.. ++.|..||.. ++... .
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEec
Confidence 78999999999988888766899999988 554332 223346789999999999888754 6889999987 65432 2
Q ss_pred ecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867 115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194 (343)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (343)
+......+.++++.++++++++...++.|..+|.. +.... .........+..+++.++
T Consensus 99 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~---------------------~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 99 LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE---------------------YDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE---------------------EECSSTTCCEEEEEECTT
T ss_pred CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE---------------------ccCCCCCCCceeEEECCC
Confidence 22234678999999999988887778899999987 32211 111223456889999998
Q ss_pred CCceEEEEeeCCCeEEEEecCCCceEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867 195 GAKSRVASVSHDRTCKIFDLCTGEDLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS 271 (343)
Q Consensus 195 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 271 (343)
+ +++++...++.|..+|. +++... +. ....+..++++++++..++....+.|.+||... .. ...
T Consensus 157 g--~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~-~~~------- 223 (300)
T 2qc5_A 157 N--ALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-EI-SEY------- 223 (300)
T ss_dssp S--SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CE-EEE-------
T ss_pred C--CEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-cE-EEE-------
Confidence 8 66666666789999998 555443 33 234688999999998777776778899998722 11 111
Q ss_pred CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeee-cc-cCCceEEEEEccCCCeeeec
Q psy10867 272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT-IQ-HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~ 338 (343)
....+...+.+++++++|+++++...++.|..||. +++.... +. ....+.+++++++|+..++.
T Consensus 224 --~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 224 --DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp --ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred --ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence 11223456889999999997777767789999998 4543321 22 34668899999999876654
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.78 E-value=3.6e-17 Score=146.73 Aligned_cols=226 Identities=15% Similarity=0.026 Sum_probs=155.2
Q ss_pred CCcceEEEEECCCCCEEEEe------cCCeEEEEEccCCceEEEecccCCCe--EEEEEecCCCEEEEecCCCe------
Q psy10867 77 CPGRISSMQASPDAAYIAVS------IETKLHMWQISSGRLLATASSHYQPI--TIVKWSADSNFIVTGGEDGT------ 142 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~dg~------ 142 (343)
|...+..++|||||++||.+ .+..|++||+.+++.+. ..+...+ ..++|+||++.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 44578999999999999941 23589999999988641 1122222 67999999999999888765
Q ss_pred -------EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC----eEEE
Q psy10867 143 -------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR----TCKI 211 (343)
Q Consensus 143 -------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~----~i~~ 211 (343)
|++|++.++..... .+.....+...+..+.|+|+| ++|+..+.++ .|++
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~------------------lv~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~l~~ 256 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDT------------------VVHERTGDPTTFLQSDLSRDG--KYLFVYILRGWSENDVYW 256 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCE------------------EEECCCCCTTCEEEEEECTTS--CCEEEEEEETTTEEEEEE
T ss_pred cCCCCCEEEEEECCCCchhce------------------EEEecCCCCEEEEEEEECCCC--CEEEEEEeCCCCceEEEE
Confidence 99999987642111 222333455678899999999 6777666555 7788
Q ss_pred EecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccccc--cCcEEEE
Q psy10867 212 FDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH--EKQVTSL 285 (343)
Q Consensus 212 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~ 285 (343)
||..+++...............+ ++++ ++..+. ++.|.+||+.+..... ...+..+ ...+..+
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~---------~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 257 KRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS---------WKEIVPEDSSASLLSV 325 (695)
T ss_dssp ECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG---------CEEEECCCSSCEEEEE
T ss_pred EcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC---------CeEEecCCCCCeEEEE
Confidence 87766655444445555566666 5666 554433 5789999987643210 1112222 4457888
Q ss_pred EEccCCCEEEEEeCCCcEEEEecc-cceeeeecc-c-CCceEEEEEccCCCeee
Q psy10867 286 SCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ-H-KGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 286 ~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~-~~~v~~~~~sp~~~~l~ 336 (343)
+|+ ++.++++...|+..++|.+. +++.+..+. + .+.+..++++|+++.|+
T Consensus 326 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 326 SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence 888 77788899999988888665 466566665 3 66788899999998776
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.78 E-value=3.3e-15 Score=123.22 Aligned_cols=265 Identities=7% Similarity=-0.141 Sum_probs=176.0
Q ss_pred EeCCceEEEEEcC--CC---eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEEcc
Q psy10867 44 LLGNDYVLGVEKG--KP---MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQIS 107 (343)
Q Consensus 44 ~~~~~~~~~~~~~--~~---~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~~~ 107 (343)
..|++..+..... .. .|.++|..+++.+..+.....+ .++++|||+++..+. ++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3466665555442 23 8899999998877555443333 999999999888742 5689999999
Q ss_pred CCceEEEeccc-------CCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeee-eecCCCCCCCCccccccceee
Q psy10867 108 SGRLLATASSH-------YQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 108 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 177 (343)
+.+.+..+... ......+.|+|||++|+.+.. ++.|.++| .+++.... +.
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~------------------- 165 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS------------------- 165 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-------------------
Confidence 88887766422 123458999999999998874 57899999 88754433 21
Q ss_pred eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee------cCCc-EEEEEEcCCCCEEEEEcCCCcE
Q psy10867 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI------LDTR-LTCVAFDGTEDNIYMGTSEGVI 250 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~------~~~~-i~~~~~~~~~~~l~~~~~d~~i 250 (343)
.. .++.+.|.++ ..+++.+.||.+.++|. +++...... ...+ .....+.+++..++..+..+.+
T Consensus 166 ----~~---~~~~~~~~~~-~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v 236 (373)
T 2mad_H 166 ----SP---TCYHIHPGAP-STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKI 236 (373)
T ss_pred ----CC---ceEEEEeCCC-ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceE
Confidence 11 1245566664 56677788999999999 887663322 1112 2335667776665555578899
Q ss_pred EEEEeecccccc--cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecc
Q psy10867 251 KSFCLRQVPRTR--DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 251 ~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~ 318 (343)
.+.|+....... .+....... ............+.++|+++.++.+.. ++.|.++|+.+++.+.++.
T Consensus 237 ~vid~~~~~~~v~~~~~~~~~~~-~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~ 315 (373)
T 2mad_H 237 LQADISAAGATNKAPIDALSGGR-KADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS 315 (373)
T ss_pred EEEeccCCcceEeeeeeecCCcc-cccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE
Confidence 999986532111 110000000 000001223445789999988777643 3579999999999999998
Q ss_pred cCCceEEEEEccCCC-eeeeccc
Q psy10867 319 HKGPVLGAFLGLLPP-AIHDYDF 340 (343)
Q Consensus 319 ~~~~v~~~~~sp~~~-~l~~~~~ 340 (343)
.......++|+|||+ .++++..
T Consensus 316 ~g~~p~~i~~s~Dg~~~l~v~~~ 338 (373)
T 2mad_H 316 LGHDVDAISVAQDGGPDLYALSA 338 (373)
T ss_pred CCCCcCeEEECCCCCeEEEEEcC
Confidence 666789999999999 6777653
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.77 E-value=1.9e-15 Score=122.37 Aligned_cols=234 Identities=8% Similarity=-0.002 Sum_probs=160.8
Q ss_pred CcceEEEEECCCCCEEEE--------ecCCeEEEEEccCCceEEEec----ccCCCeEEEEEecC-CCEEEEecCCCeEE
Q psy10867 78 PGRISSMQASPDAAYIAV--------SIETKLHMWQISSGRLLATAS----SHYQPITIVKWSAD-SNFIVTGGEDGTIC 144 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~--------~~d~~i~v~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~s~~~dg~i~ 144 (343)
.....+++|++++.++++ ..++.|.+||..+++...... ++...+.+++++++ ++++++.. .+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345689999999998887 567899999988887643322 24567899999998 76555544 44788
Q ss_pred EeecCccceeee-eecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC---------------Ce
Q psy10867 145 VWQLSRLICKQT-VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---------------RT 208 (343)
Q Consensus 145 iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---------------~~ 208 (343)
+||.. ++.... .. . ........+..+++++++ .++++...+ +.
T Consensus 96 ~~d~~-g~~~~~~~~----------------~--~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKK----------------D--SEGRRMQGCNDCAFDYEG--NLWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp EEETT-SCEEECCSB----------------C--TTSCBCBCCCEEEECTTS--CEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred EEeCC-CCEEEEEec----------------c--CCCccccCCcCEEECCCC--CEEEEecCcccccccccccccCCCCe
Confidence 99987 532211 00 0 000122457899999998 677666554 57
Q ss_pred EEEEecCCCceEEEeecCCcEEEEEEc----CCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCcccccc-CcE
Q psy10867 209 CKIFDLCTGEDLLSLILDTRLTCVAFD----GTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE-KQV 282 (343)
Q Consensus 209 i~~wd~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 282 (343)
|..||.. ++.............++++ |+++.|+++ ..++.|.+||+......... .....+..+. ..+
T Consensus 155 l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~-----~~~~~~~~~~~~~p 228 (314)
T 1pjx_A 155 IYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK-----KVWGHIPGTHEGGA 228 (314)
T ss_dssp EEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE-----EEEEECCCCSSCEE
T ss_pred EEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc-----eEEEECCCCCCCCC
Confidence 8888865 5554433444557889999 999776655 56789999998631111000 0011223333 567
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEccCCCeeeecc
Q psy10867 283 TSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 283 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
..++++++|+++++...++.|.+||..+++.+..+. +...+.+++|+|+++.|++++
T Consensus 229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence 889999999988888888999999998788777776 557899999999999666554
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.76 E-value=2.3e-16 Score=130.74 Aligned_cols=278 Identities=12% Similarity=0.045 Sum_probs=185.1
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC-------
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC------- 77 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~------- 77 (343)
+.|.+.|..+++.+.++..... + .++++||++.+..+. .++.|.++|..+.+.+......
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 7999999999999999987765 5 899999997666554 3478999999998877544311
Q ss_pred CcceEEEEECCCCCEEEEe-c--CCeEEEEEccCCceEEEecccCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccce
Q psy10867 78 PGRISSMQASPDAAYIAVS-I--ETKLHMWQISSGRLLATASSHYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLIC 153 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~~-~--d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~ 153 (343)
......++|+|||++|.++ . ++.|.+.|+.+++.+..+.... . ....|++ ..+++.+.||.+.+.+..+++.
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGET 251 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence 1234678999999988874 2 5789999999999888776421 1 2334433 4556666778877777744432
Q ss_pred eeeeecCCCCCCCCccccccceeeeecccccc-eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEE--Eeec-----
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP-VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL--SLIL----- 225 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~----- 225 (343)
..... ..+.....+ ...+.+.+++ ..++..+..+.+.+.|........ .+..
T Consensus 252 ~~~~~------------------~~~~v~~~p~~~~~~~~~dg--~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~ 311 (426)
T 3c75_H 252 KVTNT------------------EVFHTEDELLINHPAFSLRS--GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAE 311 (426)
T ss_dssp EEEEC------------------CCCSCTTSCBCSCCEECTTT--CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTT
T ss_pred EEEee------------------eeeccCCCceeeEeeecCCC--CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccc
Confidence 21100 000001111 1134667887 445555667899999986554221 1110
Q ss_pred ------CCcEEEEEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867 226 ------DTRLTCVAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289 (343)
Q Consensus 226 ------~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 289 (343)
......++++|+++.+++... ++.|.++|+.+.+.... +.. ......+.|+|
T Consensus 312 i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~-----------I~v-g~~P~gia~sp 379 (426)
T 3c75_H 312 RADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK-----------IEL-GHEIDSINVSQ 379 (426)
T ss_dssp GGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE-----------EEE-EEEECEEEECC
T ss_pred cccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE-----------EEC-CCCcCeEEEcc
Confidence 111223689999998888643 35799999988665433 221 23578999999
Q ss_pred CCC-EEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867 290 TGI-TLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLL 331 (343)
Q Consensus 290 ~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 331 (343)
||+ ++++.. .++.|.++|+.+++.+.++...+.-..+..+||
T Consensus 380 Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 380 DAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 999 888887 589999999999999999742222222555554
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.75 E-value=7.1e-14 Score=112.26 Aligned_cols=258 Identities=7% Similarity=-0.000 Sum_probs=176.1
Q ss_pred EecCCCCeEEEEecCCceEEE-EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee-cccCCcceEEEEE
Q psy10867 9 FSYDGSGAISVWEPKGGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL-RLICPGRISSMQA 86 (343)
Q Consensus 9 ~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~ 86 (343)
++...++.|.+||.. ++... .+..... .+.++++.+++.+.++...++.|..||.. ++.... .......+..+++
T Consensus 35 v~~~~~~~v~~~~~~-~~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~ 111 (300)
T 2qc5_A 35 FTQHKANKISSLDQS-GRIKEFEVPTPDA-KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITE 111 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred EEcCCCCeEEEECCC-CceEEEECCCCCC-cceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence 333346889999987 55443 2222334 78999999999888887766899999988 544322 2223467899999
Q ss_pred CCCCCEEEEec-CCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCC
Q psy10867 87 SPDAAYIAVSI-ETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 87 s~~~~~l~~~~-d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
.++++++++.. ++.|..++.. ++... .+......+..+++.+++++.++...++.|..+|. ++....
T Consensus 112 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--------- 180 (300)
T 2qc5_A 112 GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE--------- 180 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE---------
T ss_pred CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE---------
Confidence 99999888754 7799999987 65543 23334567899999999997777776789999998 432211
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEe-e-cCCcEEEEEEcCCCCEEE
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL-I-LDTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~ 242 (343)
.....+...+..+++.+++ .++++....+.|.+||. +++..... . ....+.+++++++++..+
T Consensus 181 ------------~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 181 ------------YPLPTNAAAPVGITSGNDG--ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp ------------EECSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred ------------eeCCCCCCCcceEEECCCC--CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence 1112234568899999988 67776666788999998 55543321 1 245688999999998766
Q ss_pred EEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867 243 MGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT 308 (343)
Q Consensus 243 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 308 (343)
+...++.|..||... . .... .+......+.+++++++|+++++.. . .|..+|.
T Consensus 246 ~~~~~~~i~~~~~~g-~-~~~~---------~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 246 TEWGANQIGRITNDN-T-IQEY---------QLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EETTTTEEEEECTTS-C-EEEE---------ECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred eccCCCeEEEECCCC-c-EEEE---------ECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 666678999998732 1 1111 1122334578899999998666655 4 6766664
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.74 E-value=3.1e-14 Score=114.24 Aligned_cols=230 Identities=11% Similarity=0.012 Sum_probs=146.9
Q ss_pred cceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867 38 SPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS 116 (343)
Q Consensus 38 ~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~ 116 (343)
-..+..|+| ++.++.+...++.|..||..+++... . .....+.+++++++|+++++. ++.|.+||.++++......
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEe
Confidence 556889998 46788888777999999998876532 2 345679999999999966665 6789999998876543322
Q ss_pred c----cCCCeEEEEEecCCCEEEEecCC---------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867 117 S----HYQPITIVKWSADSNFIVTGGED---------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS 183 (343)
Q Consensus 117 ~----~~~~v~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
. ....+..++++|+|+++++...+ ..-.+|.+.... .......+.
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----------------------~~~~~~~~~ 148 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH----------------------HVKKYFDQV 148 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS----------------------CEEEEEEEE
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC----------------------CEEEEeecc
Confidence 1 12357889999999966654221 122333332210 000111122
Q ss_pred cceEEEEeecCCCceEEEEeeCCCeEEEEecC--CCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccc
Q psy10867 184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC--TGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT 261 (343)
Q Consensus 184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 261 (343)
...+.++|+|+++ .++++.+.++.|.+||+. ++..... ++
T Consensus 149 ~~pngi~~spdg~-~lyv~~~~~~~i~~~~~d~~~G~~~~~----------------------------~~--------- 190 (297)
T 3g4e_A 149 DISNGLDWSLDHK-IFYYIDSLSYSVDAFDYDLQTGQISNR----------------------------RS--------- 190 (297)
T ss_dssp SBEEEEEECTTSC-EEEEEEGGGTEEEEEEECTTTCCEEEE----------------------------EE---------
T ss_pred ccccceEEcCCCC-EEEEecCCCCcEEEEeccCCCCcccCc----------------------------EE---------
Confidence 3345566666652 233344445556666542 2221000 00
Q ss_pred ccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc-cCCCeeeecc
Q psy10867 262 RDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG-LLPPAIHDYD 339 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-p~~~~l~~~~ 339 (343)
...+..+...+..++++++|++.++...++.|..||..+++.+..+. +...+++++|. |+++.|+.++
T Consensus 191 ----------~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 191 ----------VYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp ----------EEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred ----------EEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 01111223457789999999888888788899999999899998888 55789999998 8988887655
Q ss_pred c
Q psy10867 340 F 340 (343)
Q Consensus 340 ~ 340 (343)
.
T Consensus 261 ~ 261 (297)
T 3g4e_A 261 A 261 (297)
T ss_dssp B
T ss_pred C
Confidence 3
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.74 E-value=2.5e-14 Score=119.60 Aligned_cols=249 Identities=8% Similarity=-0.027 Sum_probs=163.4
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-cCC--eEEEEEccCCceEEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-IET--KLHMWQISSGRLLAT 114 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~d~--~i~v~~~~~~~~~~~ 114 (343)
.+..+++++++.++++...++.|++||.+++......... .... ++|+|+++.|+++ .++ .|.+++...+.....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 6789999999999888887789999999887765444332 2333 9999999877763 434 899999887655444
Q ss_pred e----cccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc--eEE
Q psy10867 115 A----SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP--VTH 188 (343)
Q Consensus 115 ~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~ 188 (343)
+ ......+.+++++|++..|+.+..++.|..||..+......... ...++... ...
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~------------------~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL------------------ELSGSLGTNPGPY 271 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC------------------CCCSCCCCSSCCE
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc------------------cccCCCCCCcccc
Confidence 4 22445678899999555555577788999999987542111000 01111111 128
Q ss_pred EEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC---------------CcEEEEEEcCCCCEEEEEc-CCCcEEE
Q psy10867 189 VTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD---------------TRLTCVAFDGTEDNIYMGT-SEGVIKS 252 (343)
Q Consensus 189 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~l~~~~-~d~~i~i 252 (343)
++|+|++. .++++-..++.|+.|+... +........ .....++++|+|+++++-. .++.|+.
T Consensus 272 ia~~p~~g-~lyv~d~~~~~I~~~~~~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 272 LIYYFVDS-NFYMSDQNLSSVYKITPDG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp EEEETTTT-EEEEEETTTTEEEEECTTC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred EEEeCCCC-EEEEEeCCCCEEEEEecCC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 99999532 6777777889999999754 322222221 3478999999999777777 7899999
Q ss_pred EEeecccccccccc--cCC-CCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEec
Q psy10867 253 FCLRQVPRTRDHHI--QDS-TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHT 308 (343)
Q Consensus 253 ~d~~~~~~~~~~~~--~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 308 (343)
|++........... ..+ ..-......-.....+++++++.++++-..++.|+.+++
T Consensus 350 ~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 99644321110000 000 000000011246889999999988888888888988775
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.73 E-value=9.4e-16 Score=138.53 Aligned_cols=224 Identities=13% Similarity=0.108 Sum_probs=150.3
Q ss_pred cceEEEEECCCCCEEEEe--cC----CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe----------
Q psy10867 79 GRISSMQASPDAAYIAVS--IE----TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT---------- 142 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~--~d----~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~---------- 142 (343)
..+..++|||||++||.+ .+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCC
Confidence 468899999999999863 22 36999999999876532 12222357899999 98888776553
Q ss_pred ----EEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEe
Q psy10867 143 ----ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFD 213 (343)
Q Consensus 143 ----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd 213 (343)
|++|++.++..... .+.....+...+..+.|+|+| ++|+..+.+ ..|++||
T Consensus 241 ~~~~v~~~~lgt~~~~~~------------------lv~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~~l~~~d 300 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQ------------------PVFATPELPKRGHGASVSSDG--RWVVITSSEGTDPVNTVHVAR 300 (741)
T ss_dssp CCCEEEEEETTSCGGGCE------------------EEECCTTCTTCEEEEEECTTS--CEEEEEEECTTCSCCEEEEEE
T ss_pred CCCEEEEEECCCCchhCE------------------EEeccCCCCeEEEEEEECCCC--CEEEEEEEccCCCcceEEEEE
Confidence 88888876532111 222222333458899999999 677766644 4899999
Q ss_pred cCCC--ceEEEee-cCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeeccc-ccccccccCCCCCCccccccCcEEEE
Q psy10867 214 LCTG--EDLLSLI-LDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVP-RTRDHHIQDSTSNPDFIGHEKQVTSL 285 (343)
Q Consensus 214 ~~~~--~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~ 285 (343)
+.++ +....+. ........ ++|+++.|+..+. ++.|.+||+.... .. ...+..+...+..+
T Consensus 301 ~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~----------~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 301 VTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF----------DTVVPESKDNLESV 369 (741)
T ss_dssp EETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE----------EEEECCCSSEEEEE
T ss_pred CCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc----------EEEecCCCCeEEEE
Confidence 9877 4133333 33344444 3488998888765 3459999987632 11 11123344456677
Q ss_pred EEccCCCEEEEEeCCCcEEEEecc-cceeeeecc--cCCceEEEEEccCCCeee
Q psy10867 286 SCSITGITLLSSSADETLKIWHTI-SRQCLRTIQ--HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 286 ~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~~~v~~~~~sp~~~~l~ 336 (343)
+++ ++.++++...|+..++|.+. +++....+. ..+.+..+.++|+++.|+
T Consensus 370 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 370 GIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence 887 66788888899988777654 466666665 467789999999998766
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.72 E-value=7.9e-15 Score=119.96 Aligned_cols=170 Identities=14% Similarity=0.101 Sum_probs=135.0
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc---------cc-eecccCCcceEEEEECCCCCEEEEecCCeEEEEEcc
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE---------KA-QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQIS 107 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~---------~~-~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~ 107 (343)
.+..+++++...++++|+.+ .+.+|++++.+ .. .....+.. |+.++| |+++|+++.++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEch
Confidence 68999999998888888874 67789876544 11 12234566 999999 9999998899999999998
Q ss_pred CCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867 108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187 (343)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 187 (343)
+.........|..++.++.+.+. .+++++.||.|.+||+.++... .+...|+
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------------------------~~~~~Vs 166 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------------------------QLAQNVT 166 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------------------------EEEESEE
T ss_pred hhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------------------------cccCCce
Confidence 87766667778888988887654 3888899999999999875321 1456899
Q ss_pred EEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe------e----cCCcEEEEEEcCCCCEEEE
Q psy10867 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL------I----LDTRLTCVAFDGTEDNIYM 243 (343)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~------~----~~~~i~~~~~~~~~~~l~~ 243 (343)
+++|+|+| ++.|..||.+++|+.+.++. ..++ . +...|.++.|.+++.++++
T Consensus 167 ~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEECSSE----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCc----eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999987 57788999999999877765 5555 2 4677999999999998887
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.72 E-value=2.8e-15 Score=122.07 Aligned_cols=267 Identities=7% Similarity=-0.079 Sum_probs=175.0
Q ss_pred EEEeCCceEEEEEcC-----CCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEE
Q psy10867 42 MCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQ 105 (343)
Q Consensus 42 ~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~ 105 (343)
....|++..+..... ++.|.++|..+++.+........+ . ++++|||+++.++. ++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 445688755555543 479999999999988666544444 4 99999999776532 56899999
Q ss_pred ccCCceEEEecccC-------CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCcccccccee
Q psy10867 106 ISSGRLLATASSHY-------QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPL 176 (343)
Q Consensus 106 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (343)
..+++.+..+.-.. .....+.|+|||++++.+.. ++.|.++|+.+.+...++..
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v----------------- 178 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV----------------- 178 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-----------------
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-----------------
Confidence 99999888774321 23567999999999888764 68999999999876665431
Q ss_pred eeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-CceEEEee-c----CCcE-EEEEEc-CCCCEEEEEcCCC
Q psy10867 177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GEDLLSLI-L----DTRL-TCVAFD-GTEDNIYMGTSEG 248 (343)
Q Consensus 177 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~-~----~~~i-~~~~~~-~~~~~l~~~~~d~ 248 (343)
. + +..+.|.+. ..+++.+.||.+.+.++.+ ++...... . ..++ ....|. ++|++++ .+.+|
T Consensus 179 -----~-g---~~~~~P~g~-~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g 247 (386)
T 3sjl_D 179 -----P-D---CYHIFPTAP-DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTG 247 (386)
T ss_dssp -----C-S---EEEEEEEET-TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTS
T ss_pred -----C-C---cceeecCCC-ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCC
Confidence 0 0 112234433 4666778888888888876 55432211 1 1122 124554 6776555 45589
Q ss_pred cEEEEEeeccccc--ccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeee
Q psy10867 249 VIKSFCLRQVPRT--RDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRT 316 (343)
Q Consensus 249 ~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~ 316 (343)
.|++.|+...... ..+.+.... .....-.......++++++++.++.... .+.|.+.|+.+++.+.+
T Consensus 248 ~V~v~d~~~~~~~v~~~~~~~~~~-~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~ 326 (386)
T 3sjl_D 248 KIHQIDLSSGDAKFLPAVEALTEA-ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK 326 (386)
T ss_dssp EEEEEECTTSSCEECCCEESSCHH-HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCcceeecceeccccc-cccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE
Confidence 9999998754321 111000000 0000001223335777999988776643 25799999999999999
Q ss_pred cccCCceEEEEEccCCC-eeeecc
Q psy10867 317 IQHKGPVLGAFLGLLPP-AIHDYD 339 (343)
Q Consensus 317 ~~~~~~v~~~~~sp~~~-~l~~~~ 339 (343)
+....++..++++||++ +|++.+
T Consensus 327 i~vg~~~~~lavs~D~~~~ly~tn 350 (386)
T 3sjl_D 327 FEMGHEIDSINVSQDEKPLLYALS 350 (386)
T ss_dssp EEEEEEECEEEECSSSSCEEEEEE
T ss_pred EECCCCcceEEECCCCCeEEEEEc
Confidence 98666899999999997 677654
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.71 E-value=6.2e-14 Score=112.46 Aligned_cols=216 Identities=11% Similarity=0.122 Sum_probs=149.6
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc----CCcce
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI----CPGRI 81 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~----~~~~v 81 (343)
.+.++...++.|..||..+++. ..+.. .. .+.+++++|+|.++++. . +.|.+||.++++....... ....+
T Consensus 26 ~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~-~~~~i~~~~dG~l~v~~-~-~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 100 (297)
T 3g4e_A 26 SLLFVDIPAKKVCRWDSFTKQV-QRVTM-DA-PVSSVALRQSGGYVATI-G-TKFCALNWKEQSAVVLATVDNDKKNNRF 100 (297)
T ss_dssp EEEEEETTTTEEEEEETTTCCE-EEEEC-SS-CEEEEEEBTTSSEEEEE-T-TEEEEEETTTTEEEEEEECCTTCSSEEE
T ss_pred EEEEEECCCCEEEEEECCCCcE-EEEeC-CC-ceEEEEECCCCCEEEEE-C-CeEEEEECCCCcEEEEEecCCCCCCCCC
Confidence 4555555678999999887765 33433 34 78999999999977765 4 6899999987765432221 23458
Q ss_pred EEEEECCCCCEEEEec----------CCeEEEEEccC-CceEEEecccCCCeEEEEEecCCCEE-EEecCCCeEEEeecC
Q psy10867 82 SSMQASPDAAYIAVSI----------ETKLHMWQISS-GRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLS 149 (343)
Q Consensus 82 ~~~~~s~~~~~l~~~~----------d~~i~v~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~ 149 (343)
+.+++.|+|+++++.. ...-.+|.+.. ++.. .+..+......++|+|+++.| ++.+.++.|.+|++.
T Consensus 101 ~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 8999999999888642 12344555443 3333 333344456899999999866 455667899999874
Q ss_pred --ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-
Q psy10867 150 --RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD- 226 (343)
Q Consensus 150 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~- 226 (343)
++..... +....+..+...+..+++++++ ++.++....+.|..||..+++.+..+..+
T Consensus 180 ~~~G~~~~~-----------------~~~~~~~~~~~~p~g~~~d~~G--~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 180 LQTGQISNR-----------------RSVYKLEKEEQIPDGMCIDAEG--KLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp TTTCCEEEE-----------------EEEEECCGGGCEEEEEEEBTTS--CEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CCCCcccCc-----------------EEEEECCCCCCCCCeeEECCCC--CEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 3322110 1222233344567899999998 77777777889999999889998888855
Q ss_pred CcEEEEEEc-CCCCEEEEEcC
Q psy10867 227 TRLTCVAFD-GTEDNIYMGTS 246 (343)
Q Consensus 227 ~~i~~~~~~-~~~~~l~~~~~ 246 (343)
..+++++|. |+++.|++.+.
T Consensus 241 ~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SBEEEEEEESGGGCEEEEEEB
T ss_pred CCceEEEEeCCCCCEEEEEcC
Confidence 679999998 88888877654
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.71 E-value=7.5e-15 Score=132.67 Aligned_cols=239 Identities=8% Similarity=-0.004 Sum_probs=154.5
Q ss_pred cceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecCC------------
Q psy10867 38 SPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIET------------ 99 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d~------------ 99 (343)
.+..++|||||+.++.+.++ ..|++||+.+++.+... .+...+..++|+|| +.|+. ..++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 67889999999877765542 36999999998875432 12222357899999 87775 4332
Q ss_pred --eEEEEEccCCce--EEEec--ccCCCeEEEEEecCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCc
Q psy10867 100 --KLHMWQISSGRL--LATAS--SHYQPITIVKWSADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKG 168 (343)
Q Consensus 100 --~i~v~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (343)
.|++|++.++.. ...+. .+...+..+.|+|||++|+..+.++ .|.+||+.++...
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~-------------- 307 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG-------------- 307 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC--------------
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc--------------
Confidence 499999977652 22333 3334588999999999888776543 8999998765210
Q ss_pred cccccceeeeecccccceEEEEeecCCCceEEEEeeC----CCeEEEEecCCCc-eEEE-ee-cCCcEEEEEEcCCCCEE
Q psy10867 169 VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH----DRTCKIFDLCTGE-DLLS-LI-LDTRLTCVAFDGTEDNI 241 (343)
Q Consensus 169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-~~~~-~~-~~~~i~~~~~~~~~~~l 241 (343)
....+..+...+... ++|++ ..|+..+. ++.|.+||+.++. .... +. ....+..+.++ ++.++
T Consensus 308 ------~~~~l~~~~~~~~~~-~~~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv 377 (741)
T 1yr2_A 308 ------PVTALIPDLKAQWDF-VDGVG--DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLF 377 (741)
T ss_dssp ------CCEEEECSSSSCEEE-EEEET--TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEE
T ss_pred ------ccEEecCCCCceEEE-EeccC--CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEE
Confidence 012222333344444 34777 55655554 4569999998752 3233 33 33446677887 56677
Q ss_pred EEEcCCCcEEEEEeecccccccccccCCCCCCcccc-ccCcEEEEEEccCCCEEEE----EeCCCcEEEEecccce
Q psy10867 242 YMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-HEKQVTSLSCSITGITLLS----SSADETLKIWHTISRQ 312 (343)
Q Consensus 242 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s----~~~dg~i~iwd~~~~~ 312 (343)
++...++..++|.+...... ...+.. +...+..+.++|+++.|+. ....+.|++||+.+++
T Consensus 378 ~~~~~dg~~~l~~~~~~g~~----------~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 378 ASYIHDAKSQVLAFDLDGKP----------AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTEEEEEEEETTSCE----------EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEECCEEEEEEEeCCCCc----------eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 77888998888876521110 112222 3567888999999886652 2334789999998776
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=9.4e-15 Score=119.70 Aligned_cols=262 Identities=10% Similarity=0.068 Sum_probs=168.2
Q ss_pred cceEEEEeCCceEEEEEc--CCCeEEEEeCCCccccee------cccCCcceEEEEECCCCCEEEEe-c-----CCeEEE
Q psy10867 38 SPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQL------RLICPGRISSMQASPDAAYIAVS-I-----ETKLHM 103 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~-~-----d~~i~v 103 (343)
.+..++++|+|+++++.. .++.++||.+.+++.... ...+...+..+++.++++++++. . ++.|.+
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 789999999999888853 224355555544443211 11244679999999999877763 2 579999
Q ss_pred EEccCCceEEEeccc------CCCeEEEEEecCCCE-EEEec---CCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867 104 WQISSGRLLATASSH------YQPITIVKWSADSNF-IVTGG---EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173 (343)
Q Consensus 104 ~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (343)
||+.+++.+..+... ...+..+++++++.. +++-. .++.|.+||+.+++...
T Consensus 98 ~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r------------------ 159 (343)
T 2qe8_A 98 WDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR------------------ 159 (343)
T ss_dssp EETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE------------------
T ss_pred EECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE------------------
Confidence 999999877665422 235689999986544 45544 57899999998764322
Q ss_pred ceeeeecccccceE-EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC-cEE
Q psy10867 174 EPLHVKSQHSLPVT-HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG-VIK 251 (343)
Q Consensus 174 ~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~ 251 (343)
.+.+|..... ...+.+++ ..+.+.+.++.++.|. ..+..++|+|+++.|+++...+ .++
T Consensus 160 ----~~~~~~~~~~~~~~~~~~g--~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 160 ----VLQGYPGIAPEDIDLVIDG--VPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp ----ECTTCTTTSCCSCCCEETT--EECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred ----EecCCCcccccccceeECC--EEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEE
Confidence 2222211100 13344566 5666677777776653 2367899999999998887665 454
Q ss_pred EEEeecccccc--cccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEE
Q psy10867 252 SFCLRQVPRTR--DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAF 327 (343)
Q Consensus 252 i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~ 327 (343)
.++........ .... .. .....++......++++++|+++++...++.|.+||..+++...... ....+.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~--~~-~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va 297 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAEL--GS-KIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFN 297 (343)
T ss_dssp EEEHHHHTCTTCCHHHH--HT-TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEE
T ss_pred EEEHHHhcCCCCChhhh--hc-ceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeE
Confidence 44433211100 0000 00 00112344456779999999999999999999999985666433333 245689999
Q ss_pred EccCCCeeeecc
Q psy10867 328 LGLLPPAIHDYD 339 (343)
Q Consensus 328 ~sp~~~~l~~~~ 339 (343)
|.++++++++.+
T Consensus 298 ~~~~g~l~v~~~ 309 (343)
T 2qe8_A 298 FGSDGYLYFDCN 309 (343)
T ss_dssp ECTTSCEEEEEC
T ss_pred ECCCCcEEEEeC
Confidence 999998777654
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.70 E-value=4e-15 Score=121.45 Aligned_cols=269 Identities=10% Similarity=-0.031 Sum_probs=177.9
Q ss_pred eEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCcccceecccC-------C
Q psy10867 16 AISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQEKAQLRLIC-------P 78 (343)
Q Consensus 16 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~~~~~~~~~~-------~ 78 (343)
.|.+.|..+++.+.++..... + .+.++||++.+..+. .++.|.+||..+++.+..+... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 888999999999999987775 5 799999997666664 3578999999999988665422 1
Q ss_pred cceEEEEECCCCCEEEEec---CCeEEE--EEccCCceEEEecccCCCeEEEEEecCCC-EEEEecCCCeEEEeecCc--
Q psy10867 79 GRISSMQASPDAAYIAVSI---ETKLHM--WQISSGRLLATASSHYQPITIVKWSADSN-FIVTGGEDGTICVWQLSR-- 150 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~~---d~~i~v--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~-- 150 (343)
.....++++|||++++++. ++.+.+ +|+.+ +..+... +. ..+.|+++ .+++.+.||.+.+.|+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence 2356899999999888742 467888 99877 4444321 11 22345443 455666788888888876
Q ss_pred ---cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc--eEEEeec
Q psy10867 151 ---LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE--DLLSLIL 225 (343)
Q Consensus 151 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~ 225 (343)
++..... . ....-...+. . .+++ ..++..+. +.+.+.|..+.. .+..+..
T Consensus 197 ~~~~~v~~~~-----------------t-~~i~vg~~P~---~-~~~~--~~~~~vs~-~~V~viD~~~~~~~v~~~~~~ 251 (368)
T 1mda_H 197 AAAGIVGAQC-----------------T-GAQNCSSQAA---Q-ANYP--GMLVWAVA-SSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp CCCEECCCCS-----------------C-TTSCBCSCCE---E-ETTT--TEEEECBS-SCCEEEECCSSCCEEECCCCS
T ss_pred ccCCeEEEEe-----------------e-eeeeCCCCcc---c-cccC--CEEEEEcC-CEEEEEECCCCcceEEEEEEe
Confidence 2211100 0 0000112222 2 5555 34444445 899999986543 2222211
Q ss_pred -----------CCcEEEEEEcCCCCEEEEEcC-C--------CcEEEEEeecccccccccccCCCCCCccccccCcEEEE
Q psy10867 226 -----------DTRLTCVAFDGTEDNIYMGTS-E--------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL 285 (343)
Q Consensus 226 -----------~~~i~~~~~~~~~~~l~~~~~-d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 285 (343)
+.....++++|+++.++++.. . +.+.++|+.+.+.... +... .....+
T Consensus 252 ~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~-----------i~vg-~~p~gi 319 (368)
T 1mda_H 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP-----------ISNG-HDSDAI 319 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC-----------CEEE-EEECEE
T ss_pred ccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE-----------EECC-CCcceE
Confidence 111222789999999987643 2 3566999988655332 3222 258899
Q ss_pred EEccCCC-EEEEEe-CCCcEEEEecccceeeeecccCCceEEEEEccC
Q psy10867 286 SCSITGI-TLLSSS-ADETLKIWHTISRQCLRTIQHKGPVLGAFLGLL 331 (343)
Q Consensus 286 ~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 331 (343)
+|+|||+ .+++.. .++.|.++|+.+++.+.++........+++.+.
T Consensus 320 ~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 320 IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCC
T ss_pred EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeecC
Confidence 9999998 455666 589999999999999999986666677777653
No 214
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.70 E-value=1.5e-14 Score=128.85 Aligned_cols=306 Identities=10% Similarity=0.045 Sum_probs=192.8
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCc----------ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLS----------PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
...+|..+.++.|..+|..+|+.+.++....... -..+++. ++++++ +..|+.|..+|..+++.+...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v-~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYV-GVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEE-EccCCEEEEEECCCCCEeeee
Confidence 4566777778999999999999999987643201 0122332 445444 445599999999999887433
Q ss_pred cc--CCcceEEEEECC---CCCEEEEe------cCCeEEEEEccCCceEEEecccC------------------------
Q psy10867 75 LI--CPGRISSMQASP---DAAYIAVS------IETKLHMWQISSGRLLATASSHY------------------------ 119 (343)
Q Consensus 75 ~~--~~~~v~~~~~s~---~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~------------------------ 119 (343)
.. +......+..+| ++.+++.+ .++.|+.||..+|+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 22 111111112222 56555543 26899999999999887664210
Q ss_pred -------CCeEEEEEecCCCEEEEecCCCe-------------------EEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867 120 -------QPITIVKWSADSNFIVTGGEDGT-------------------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173 (343)
Q Consensus 120 -------~~v~~~~~~~~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (343)
.....+++.|+...++.++.++. |..+|..+++....++......
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~--------- 298 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA--------- 298 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC---------
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc---------
Confidence 01125788888889999888764 9999999998777654210000
Q ss_pred ceeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC--c----------------------
Q psy10867 174 EPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT--R---------------------- 228 (343)
Q Consensus 174 ~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--~---------------------- 228 (343)
..+ ....++.......++. ...++.++.+|.++++|.++|+.+....... .
T Consensus 299 ---wd~-~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~ 374 (689)
T 1yiq_A 299 ---WDY-TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWK 374 (689)
T ss_dssp ---SCC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTT
T ss_pred ---ccc-cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccC
Confidence 000 0111122222223441 1378899999999999999999885543211 0
Q ss_pred ----------------EEEEEEcCCCCEEEEEcC---------------------------------------------C
Q psy10867 229 ----------------LTCVAFDGTEDNIYMGTS---------------------------------------------E 247 (343)
Q Consensus 229 ----------------i~~~~~~~~~~~l~~~~~---------------------------------------------d 247 (343)
-..++|+|+..++++... +
T Consensus 375 ~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 454 (689)
T 1yiq_A 375 NGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWS 454 (689)
T ss_dssp SSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCE
T ss_pred CCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcc
Confidence 112688998888887643 2
Q ss_pred CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--CceEE
Q psy10867 248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--GPVLG 325 (343)
Q Consensus 248 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~ 325 (343)
|.|+.||+.+.+..... ..+ .+...-.+...+.+++.++.||.|+.||.++|+.+.+++.. ....-
T Consensus 455 g~l~A~D~~tG~~~W~~-----------~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 522 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEV-----------PYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAP 522 (689)
T ss_dssp EEEEEEETTTTEEEEEE-----------EES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred eeEEEEECCCCCeEeEc-----------cCC-CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCc
Confidence 66777777765543322 111 22222345567789999999999999999999999998822 22244
Q ss_pred EEEccCCCeeee
Q psy10867 326 AFLGLLPPAIHD 337 (343)
Q Consensus 326 ~~~sp~~~~l~~ 337 (343)
+.|..+|+..++
T Consensus 523 ~ty~~~G~qyv~ 534 (689)
T 1yiq_A 523 VTYSVDGEQYVT 534 (689)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEEECCEEEEE
Confidence 677888875543
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.69 E-value=4.9e-15 Score=122.85 Aligned_cols=253 Identities=8% Similarity=-0.077 Sum_probs=170.8
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-----------cCCeEEEEEccCCceEEEeccc-------C
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-----------IETKLHMWQISSGRLLATASSH-------Y 119 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----------~d~~i~v~~~~~~~~~~~~~~~-------~ 119 (343)
+.|.++|..+.+.+..+.....+ .++++||+++|.++ .++.|.++|..+++.+..+.-. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 69999999999988666544445 89999999977763 2568999999999988776421 1
Q ss_pred CCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867 120 QPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK 197 (343)
Q Consensus 120 ~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 197 (343)
.....+.|+||+++++.+.. ++.|.+.|+.+.+...++..+ . +....|++.
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-----------------------g---~~~~~p~g~- 229 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-----------------------D---CYHIFPASP- 229 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----------------------S---EEEEEEEET-
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-----------------------C---ceeeccCCC-
Confidence 23467899999999998864 578999999998766554310 0 123344443
Q ss_pred eEEEEeeCCCeEEEEecCCCceEEE----eec-CCc-EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc--cccccCC
Q psy10867 198 SRVASVSHDRTCKIFDLCTGEDLLS----LIL-DTR-LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR--DHHIQDS 269 (343)
Q Consensus 198 ~~l~~~~~d~~i~~wd~~~~~~~~~----~~~-~~~-i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~ 269 (343)
..+++.+.||.+.+.+..+++.... +.. ..+ ...+.+.+++..++.....+.+.+.|+....... .+.....
T Consensus 230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~ 309 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE 309 (426)
T ss_dssp TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence 4556666778877777765555432 111 111 1235679999988888888999999986532111 0000000
Q ss_pred CCCCccccccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecccCCceEEEEEccCCC-eeeec
Q psy10867 270 TSNPDFIGHEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPP-AIHDY 338 (343)
Q Consensus 270 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~ 338 (343)
..+ ...........++++|+++.++.... ++.|.+.|+.+++.+.++........++|+|||+ +++++
T Consensus 310 ~~i-~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 310 AER-ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp TTG-GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEE
T ss_pred ccc-ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEE
Confidence 000 00001112223689999887766542 3579999999999999998555789999999999 88877
Q ss_pred cc
Q psy10867 339 DF 340 (343)
Q Consensus 339 ~~ 340 (343)
.+
T Consensus 389 n~ 390 (426)
T 3c75_H 389 SA 390 (426)
T ss_dssp ET
T ss_pred cC
Confidence 64
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.68 E-value=1.4e-13 Score=115.14 Aligned_cols=235 Identities=8% Similarity=-0.008 Sum_probs=153.1
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCC--eEEEEeCCCcccceec----ccCCcc
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP--MIQAWPVNSQEKAQLR----LICPGR 80 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~iw~~~~~~~~~~~----~~~~~~ 80 (343)
+.++...++.|++||..+++......... ... ++|+|++..+..+..++ .|.+++...+.....+ ......
T Consensus 144 lyv~d~~~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~ 220 (409)
T 3hrp_A 144 VLAYQRDDPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGK 220 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSC
T ss_pred EEEEecCCCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCC
Confidence 44444446899999998777766555533 445 99999998777666544 7888887765443222 224566
Q ss_pred eEEEEECC-CCCEEEEecCCeEEEEEccCCceEEE----ecccCCCe--EEEEEecC-CCEEEEecCCCeEEEeecCccc
Q psy10867 81 ISSMQASP-DAAYIAVSIETKLHMWQISSGRLLAT----ASSHYQPI--TIVKWSAD-SNFIVTGGEDGTICVWQLSRLI 152 (343)
Q Consensus 81 v~~~~~s~-~~~~l~~~~d~~i~v~~~~~~~~~~~----~~~~~~~v--~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~ 152 (343)
+.+++++| ++.++++..++.|+.||..++..... ..++...- ..++|+|+ +.++++-..++.|+.|+.....
T Consensus 221 p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~ 300 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC 300 (409)
T ss_dssp CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE
T ss_pred cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE
Confidence 78899999 56666655678999999987764332 22222222 38999994 6666666778899999986531
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-CCCeEEEEecCCCceEEEeec------
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-HDRTCKIFDLCTGEDLLSLIL------ 225 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~------ 225 (343)
..+. +.....+ ...- ......-.....++++|++ .++++-+ .++.|+.||+.+++.......
T Consensus 301 --~~~~-g~~~~~g-----~~dg-~~~~~~~~~P~gia~d~dG--~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~ 369 (409)
T 3hrp_A 301 --EWFC-GSATQKT-----VQDG-LREEALFAQPNGMTVDEDG--NFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQ 369 (409)
T ss_dssp --EEEE-ECTTCCS-----CBCE-EGGGCBCSSEEEEEECTTC--CEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSC
T ss_pred --EEEE-eCCCCCC-----cCCC-cccccEeCCCeEEEEeCCC--CEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCc
Confidence 1111 0000000 0000 0001112457899999998 7777777 889999999877765433322
Q ss_pred ---------CCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 226 ---------DTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 226 ---------~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
-.....+++++++.++++-..++.|+.+++
T Consensus 370 ~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 370 IDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 135889999999877777778888888765
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.68 E-value=5.5e-14 Score=113.26 Aligned_cols=230 Identities=9% Similarity=-0.019 Sum_probs=154.7
Q ss_pred cccCCcceEEEEECCCCC-EEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867 74 RLICPGRISSMQASPDAA-YIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 74 ~~~~~~~v~~~~~s~~~~-~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
+...........|+|+++ +++++ .++.|..|+. +++ ...+..+...+..++++++++++++...++.|.+|+.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 334455677899999998 44453 5789999997 454 34555566778999999999977776667889999986 3
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEE----eeC-------------CCeEEEEe
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVAS----VSH-------------DRTCKIFD 213 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~----~~~-------------d~~i~~wd 213 (343)
.... + .....+ ....+..+++.|++ .++++ |.. .+.|..||
T Consensus 117 ~~~~-~------------------~~~~~~~~~~~~~~i~~d~dG--~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 117 QAHL-L------------------VGRYAGKRLNSPNDLIVARDG--AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp CEEE-E------------------ECEETTEECSCCCCEEECTTS--CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred CEEE-E------------------EeccCCCccCCCCCEEECCCC--CEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 2211 1 001111 12346789999998 67775 332 35688888
Q ss_pred cCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCC------CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867 214 LCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC 287 (343)
Q Consensus 214 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (343)
..+++..... .......++|+|+++.|+++... +.|++|++.... ...... .. ......+..+++
T Consensus 176 ~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~-----~~--~~~~~~pdgi~~ 246 (305)
T 3dr2_A 176 PDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRH-----FA--SVPDGLPDGFCV 246 (305)
T ss_dssp SSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEE-----EE--CCSSSCCCSEEE
T ss_pred CCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeE-----EE--ECCCCCCCeEEE
Confidence 7777655443 44457889999999988887665 789999987532 110000 00 011234557899
Q ss_pred ccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 288 SITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+++|++.++ +.+ .|.+|+. +++.+..+.....+.+++|+|+++.|+.++
T Consensus 247 d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 247 DRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITG 295 (305)
T ss_dssp CTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEE
T ss_pred CCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEc
Confidence 999995544 455 4999997 677777777444689999999998887654
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.67 E-value=1.8e-14 Score=127.99 Aligned_cols=306 Identities=9% Similarity=0.041 Sum_probs=195.4
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCC----------cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVL----------SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
...+|..+.++.|..+|..+|+.+.+++..... ....+++. ++++++ +..++.|..+|..+++.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v-~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYV-GAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE-CCEEEE-EcCCCEEEEEECCCCCEEeee
Confidence 445677777899999999999999988765320 11233332 344444 455599999999999887444
Q ss_pred ccC-C----cceEEEEECCCCCEEEEec------CCeEEEEEccCCceEEEecccCCC----------------------
Q psy10867 75 LIC-P----GRISSMQASPDAAYIAVSI------ETKLHMWQISSGRLLATASSHYQP---------------------- 121 (343)
Q Consensus 75 ~~~-~----~~v~~~~~s~~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~~~~---------------------- 121 (343)
... . ..+..--...++.+++.+. ++.|+.+|..+|+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 332 1 1111100011455555432 689999999999988776532111
Q ss_pred ----------eEEEEEecCCCEEEEecCCC-------------------eEEEeecCccceeeeeecCCCCCCCCccccc
Q psy10867 122 ----------ITIVKWSADSNFIVTGGEDG-------------------TICVWQLSRLICKQTVAFGIPGSSGKGVTGL 172 (343)
Q Consensus 122 ----------v~~~~~~~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (343)
...++++|++..++.++.++ .|..+|..+++....++.......
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w------- 307 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW------- 307 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS-------
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc-------
Confidence 12578888888888887664 499999999887776542110000
Q ss_pred cceeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC------------cE----------
Q psy10867 173 TEPLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT------------RL---------- 229 (343)
Q Consensus 173 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------------~i---------- 229 (343)
.... ......+....+|. ...++.++.+|.++++|.++|+.+..+.... ++
T Consensus 308 -----d~~~-~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~ 381 (677)
T 1kb0_A 308 -----DYTS-TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSK 381 (677)
T ss_dssp -----CCCC-CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTS
T ss_pred -----cccc-CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCC
Confidence 0000 11122223333441 1468889999999999999999987765221 01
Q ss_pred --------------EEEEEcCCCCEEEEEcCC-------------------------------------------CcEEE
Q psy10867 230 --------------TCVAFDGTEDNIYMGTSE-------------------------------------------GVIKS 252 (343)
Q Consensus 230 --------------~~~~~~~~~~~l~~~~~d-------------------------------------------~~i~i 252 (343)
..++++|+..++++...+ |.|..
T Consensus 382 ~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A 461 (677)
T 1kb0_A 382 PQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLA 461 (677)
T ss_dssp CEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEE
T ss_pred ccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEE
Confidence 146889998888886432 67888
Q ss_pred EEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--CceEEEEEcc
Q psy10867 253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--GPVLGAFLGL 330 (343)
Q Consensus 253 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp 330 (343)
||+.+.+...... +..++....+..++.+++.++.||.+++||.++|+.+.++... ....-+.|.+
T Consensus 462 ~D~~tG~~~W~~~------------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~ 529 (677)
T 1kb0_A 462 WDPVAQKAAWSVE------------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMV 529 (677)
T ss_dssp EETTTTEEEEEEE------------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred EeCCCCcEEeecC------------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEe
Confidence 8887765433221 2223344456677888889999999999999999999999822 2234466778
Q ss_pred CCCeeee
Q psy10867 331 LPPAIHD 337 (343)
Q Consensus 331 ~~~~l~~ 337 (343)
+|+..++
T Consensus 530 ~G~~~v~ 536 (677)
T 1kb0_A 530 DGRQYVS 536 (677)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8875543
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.67 E-value=5.4e-13 Score=108.40 Aligned_cols=224 Identities=9% Similarity=0.009 Sum_probs=149.1
Q ss_pred eEEEEECCCCC-EEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867 81 ISSMQASPDAA-YIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA 158 (343)
Q Consensus 81 v~~~~~s~~~~-~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 158 (343)
.....|+|++. ++++. .++.|..||..+++.. .+. ....+.+++|+|+++++++. . ..|.+||..++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~- 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA- 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE-
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe-
Confidence 46778999755 44453 5789999999877543 332 34679999999999877765 3 35999998776432111
Q ss_pred cCCCCCCCCccccccceeeeec--ccccceEEEEeecCCCceEEEEeeC------CCeEEEEecCCCceEEEeecCCcEE
Q psy10867 159 FGIPGSSGKGVTGLTEPLHVKS--QHSLPVTHVTLSKLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILDTRLT 230 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~i~ 230 (343)
... .....+..++++|++ .++++... .+.|..++ +++............
T Consensus 126 -------------------~~~~~~~~~~~~~i~~d~~G--~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~ 182 (326)
T 2ghs_A 126 -------------------ELESDLPGNRSNDGRMHPSG--ALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPN 182 (326)
T ss_dssp -------------------CSSTTCTTEEEEEEEECTTS--CEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEE
T ss_pred -------------------eCCCCCCCCCCCCEEECCCC--CEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccC
Confidence 000 112458899999998 55554432 25566666 454433223334577
Q ss_pred EEEEcCCCCEEEEE-cCCCcEEEEEee--cc-cccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy10867 231 CVAFDGTEDNIYMG-TSEGVIKSFCLR--QV-PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW 306 (343)
Q Consensus 231 ~~~~~~~~~~l~~~-~~d~~i~i~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 306 (343)
.++|+|+++.++.+ +.++.|.+||+. +. ..... .....+......+..++++++|+++++...++.|..|
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~------~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA------EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC------EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc------eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 89999999977665 557899999986 32 11000 0011122234557789999999888777777899999
Q ss_pred ecccceeeeecc-cCCceEEEEEc-cCCCeeeecc
Q psy10867 307 HTISRQCLRTIQ-HKGPVLGAFLG-LLPPAIHDYD 339 (343)
Q Consensus 307 d~~~~~~~~~~~-~~~~v~~~~~s-p~~~~l~~~~ 339 (343)
|. +++.+..+. +...+++++|+ |+++.|+.++
T Consensus 257 d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 257 DT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp CT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 98 677777777 55679999998 9988776554
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.66 E-value=2.9e-13 Score=110.02 Aligned_cols=220 Identities=12% Similarity=-0.014 Sum_probs=147.4
Q ss_pred cceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec
Q psy10867 38 SPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS 116 (343)
Q Consensus 38 ~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~ 116 (343)
...+.+|+|+ +.++.+...++.|..|+..+++.... .....+.+++|+|+|++++++. ..|.+||..+++......
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~--~~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVH--ALPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE--ECSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEEC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE--ECCCcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEee
Confidence 3467899996 67777777778999999988764332 2346799999999999888764 459999998887543322
Q ss_pred c---c-CCCeEEEEEecCCCEEEEecC------CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867 117 S---H-YQPITIVKWSADSNFIVTGGE------DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV 186 (343)
Q Consensus 117 ~---~-~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (343)
. . ...+.+++++|+|+++++... .+.|..++ +++. ..+..+....
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-----------------------~~~~~~~~~~ 181 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-----------------------TKLFADISIP 181 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-----------------------EEEEEEESSE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-----------------------EEeeCCCccc
Confidence 1 1 235889999999997665432 24455555 3321 1111223456
Q ss_pred EEEEeecCCCceEE-EEeeCCCeEEEEecC--CC-ce-----EEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867 187 THVTLSKLGAKSRV-ASVSHDRTCKIFDLC--TG-ED-----LLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 187 ~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~--~~-~~-----~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 256 (343)
..++|+|++ +.+ ++.+.++.|.+||+. ++ +. ...+. ....+..++++++|++.++...++.|.+||..
T Consensus 182 ~~i~~s~dg--~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 182 NSICFSPDG--TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEECTTS--CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCeEEcCCC--CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 789999998 544 555667899999986 55 32 11221 23457889999999877776667889999873
Q ss_pred cccccccccccCCCCCCccccccCcEEEEEEc-cCCCEEEEEeC
Q psy10867 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS-ITGITLLSSSA 299 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~ 299 (343)
... +..+..+...+++++|+ ++++.|+.++.
T Consensus 260 -g~~-----------~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 260 -GNH-----------IARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp -CCE-----------EEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred -CCE-----------EEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 222 22233445579999998 88876655443
No 221
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.65 E-value=1.2e-14 Score=118.96 Aligned_cols=182 Identities=12% Similarity=0.040 Sum_probs=133.7
Q ss_pred CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867 121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV 200 (343)
Q Consensus 121 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 200 (343)
++..+++++...++++|+.++ +++|++........-. . .. .++... ..+.. |+.++| ++ .+|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~---~---~~-----~~~~~~-~~lp~-V~~l~f--d~--~~L 100 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSD---S---TP-----LTFKWE-KEIPD-VIFVCF--HG--DQV 100 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSS---S---CC-----CCCSEE-EECTT-EEEEEE--ET--TEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccc---c---cc-----ccceEE-eeCCC-eeEEEE--CC--CEE
Confidence 688999999999999999874 6669987653110000 0 00 012111 23555 999999 66 678
Q ss_pred EEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867 201 ASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE 279 (343)
Q Consensus 201 ~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (343)
+++ .++.|++||+++........ +..++.++.+.+. .+++++.||.|.+||+...... .+.
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~---------------~~~ 162 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK---------------QLA 162 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE---------------EEE
T ss_pred EEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc---------------ccc
Confidence 887 88999999998776554443 5667888777655 3888899999999999864321 145
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeccccee--eeec------c----cCCceEEEEEccCCCeeeeccc
Q psy10867 280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQC--LRTI------Q----HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~------~----~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
..|++++|||+| ++.|..||.+++|+...++. ..++ . |...|.++.|.+++++|++...
T Consensus 163 ~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 163 QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 689999999999 78899999999999887775 4555 2 5678999999999999987653
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.63 E-value=6.3e-13 Score=107.04 Aligned_cols=212 Identities=13% Similarity=0.072 Sum_probs=146.8
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc----CCcceE
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI----CPGRIS 82 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~----~~~~v~ 82 (343)
+.|+...++.|..|+. +++ ...+..+.. .+..++++++|+++++...++.|.+|+.+ ++....... ....+.
T Consensus 59 l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~-~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~ 134 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGT-VDVLLDATA-FTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN 134 (305)
T ss_dssp EEEEETTTTEEEEEET-TSC-EEEEEESCS-CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC
T ss_pred EEEEECCCCEEEEEeC-CCC-EEEEeCCCC-ccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC
Confidence 5666666789999987 554 345555566 78999999999988887766789999986 443322111 123467
Q ss_pred EEEECCCCCEEEE----ec--------------CCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC----
Q psy10867 83 SMQASPDAAYIAV----SI--------------ETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED---- 140 (343)
Q Consensus 83 ~~~~s~~~~~l~~----~~--------------d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---- 140 (343)
.+++.|+|+++++ +. .+.|..+|..+++..... .......++|+|+++.|+.+...
T Consensus 135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---
T ss_pred CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCC
Confidence 8999999998885 21 256888887777654433 34457889999999977776654
Q ss_pred --CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc
Q psy10867 141 --GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE 218 (343)
Q Consensus 141 --g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 218 (343)
+.|.+|++.... .... .............+++++++ ++. ++..+ .|.+|+. .++
T Consensus 213 ~~~~i~~~~~~~~~-l~~~------------------~~~~~~~~~~pdgi~~d~~G--~lw-v~~~~-gv~~~~~-~g~ 268 (305)
T 3dr2_A 213 GSVEITAFAWRDGA-LHDR------------------RHFASVPDGLPDGFCVDRGG--WLW-SSSGT-GVCVFDS-DGQ 268 (305)
T ss_dssp CCCEEEEEEEETTE-EEEE------------------EEEECCSSSCCCSEEECTTS--CEE-ECCSS-EEEEECT-TSC
T ss_pred CCCEEEEEEecCCC-ccCC------------------eEEEECCCCCCCeEEECCCC--CEE-EecCC-cEEEECC-CCC
Confidence 689999987543 1110 00111123345678899998 544 44444 4999997 677
Q ss_pred eEEEeecCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867 219 DLLSLILDTRLTCVAFDGTEDNIYMGTSEG 248 (343)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 248 (343)
.+..+..+..+.+++|.|+++.|++++.++
T Consensus 269 ~~~~~~~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 269 LLGHIPTPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEEECSSCCCEEEECTTSCEEEEEETTE
T ss_pred EEEEEECCCceeEEEEeCCCCEEEEEcCCe
Confidence 777777666789999999999998887654
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.62 E-value=1.1e-12 Score=108.90 Aligned_cols=279 Identities=12% Similarity=0.090 Sum_probs=172.9
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCC--------CCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGAS--------VLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI 76 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~ 76 (343)
...+|.++.++.|..+|..+|+.+..+.... ...+.+.-...++.+++... ++.|..+|..+++.......
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-TSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEeC
Confidence 3456777778999999999999988776632 10222222223556665554 48999999999887643332
Q ss_pred CCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCe-----EEEEEecCCCEEEEecCCCeEEEeecCcc
Q psy10867 77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI-----TIVKWSADSNFIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 151 (343)
.......... .++.+++.+.++.|..+|..+|+.+.......... ..... .+..++.++.++.+..+|..++
T Consensus 132 ~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 132 AGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp SSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTC
T ss_pred CCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCC
Confidence 2211111112 25666666788999999999999887765432211 11222 2456788888999999999998
Q ss_pred ceeeeeecCCCCCCCCccccccceeeee-cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEE
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVK-SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLT 230 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~ 230 (343)
+.........+.... ....+ .....++ + .+ ..++.++.++.+..+|.++++.+....... ..
T Consensus 209 ~~~w~~~~~~~~~~~--------~~~~~~~~~~~p~----~-~~---~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~ 271 (376)
T 3q7m_A 209 QMIWQQRISQATGST--------EIDRLSDVDTTPV----V-VN---GVVFALAYNGNLTALDLRSGQIMWKRELGS-VN 271 (376)
T ss_dssp CEEEEEECCC-------------------CCCCCCE----E-ET---TEEEEECTTSCEEEEETTTCCEEEEECCCC-EE
T ss_pred cEEEEEecccCCCCc--------ccccccccCCCcE----E-EC---CEEEEEecCcEEEEEECCCCcEEeeccCCC-CC
Confidence 776654321110000 00000 0001111 1 12 367777889999999999999887766433 33
Q ss_pred EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
.+.. ++..+++++.++.+..+|..+.+....... . ....+..... .+..|+.++.+|.|..+|..+
T Consensus 272 ~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~--------~--~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 272 DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSD--------L--LHRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECT--------T--TTSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecc--------c--CCCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 4443 367888888899999999887654332210 0 0111122222 245788888999999999999
Q ss_pred ceeeeecc
Q psy10867 311 RQCLRTIQ 318 (343)
Q Consensus 311 ~~~~~~~~ 318 (343)
|+.+..+.
T Consensus 338 G~~~~~~~ 345 (376)
T 3q7m_A 338 GRFVAQQK 345 (376)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEe
Confidence 99888776
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.61 E-value=6.8e-14 Score=125.34 Aligned_cols=237 Identities=12% Similarity=0.088 Sum_probs=151.7
Q ss_pred cceEEEEeCCceEEEEE-----cCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE-ecC-------------
Q psy10867 38 SPHSMCLLGNDYVLGVE-----KGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIE------------- 98 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~-----~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~d------------- 98 (343)
.+..++|||||++++.+ ++...|++||+.+++.+... ........++|+ |++.|+. ..+
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 68889999999887743 22357999999998865431 111123578899 9987775 444
Q ss_pred CeEEEEEccCCc----eEEEecc-cCCCeEEEEEecCCCEEEEec----CCCeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867 99 TKLHMWQISSGR----LLATASS-HYQPITIVKWSADSNFIVTGG----EDGTICVWQLSRLICKQTVAFGIPGSSGKGV 169 (343)
Q Consensus 99 ~~i~v~~~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
..|++|++.++. ++..... |......+.|+||+++|+... .+..|.++|+.++..
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~---------------- 271 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA---------------- 271 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC----------------
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC----------------
Confidence 249999998764 2333333 455678899999999876543 235899999876521
Q ss_pred ccccceeeeecccccceEEEEeecCCCceEEEEeeCC---CeEEEEecCCCce--EEEe-ecCCcEEEEEEcCCCCEEEE
Q psy10867 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD---RTCKIFDLCTGED--LLSL-ILDTRLTCVAFDGTEDNIYM 243 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~--~~~~-~~~~~i~~~~~~~~~~~l~~ 243 (343)
....+..+....... +++++. .+++....+ +.|..+|+.++.. ...+ .+...+. .|+++++.|+.
T Consensus 272 -----~~~~l~~~~~~~~~~-~~~~g~-~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 272 -----PLLTVQGDLDADVSL-VDNKGS-TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp -----CCEEEECSSSSCEEE-EEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEE
T ss_pred -----ceEEEeCCCCceEEE-EeccCC-EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEE
Confidence 122233444444444 566663 455554443 6899999988754 2233 3444444 88999998887
Q ss_pred EcCCC---cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC----CcEEEEecccce
Q psy10867 244 GTSEG---VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD----ETLKIWHTISRQ 312 (343)
Q Consensus 244 ~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~ 312 (343)
...++ .|++||+..... ... .+ .....+..+.++++++.|+....+ +.|+.||+.+++
T Consensus 343 ~~~~~g~~~l~~~d~~g~~~-~~l---------~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKRV-REV---------AL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEETTEEEEEEECTTSCEE-EEE---------CC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEECCeeEEEEEECCCCee-EEe---------ec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 66544 678888764221 111 11 133457777888888866655444 789999987765
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.60 E-value=1.4e-13 Score=116.81 Aligned_cols=287 Identities=8% Similarity=0.020 Sum_probs=189.5
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCC---------------------------------------CCcceEEEEeC-
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGAS---------------------------------------VLSPHSMCLLG- 46 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------------~~~v~~~~~~~- 46 (343)
..+|++..|.++|+-+.+++.+..+.... + .....+.|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~g-d~hh~~~s~t 95 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNG-DLHHVHMSFT 95 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCC-CBCCEEEEEE
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccC-CCCccccCCC
Confidence 34566668999999999988887653210 1 222355554
Q ss_pred ----CceEEEEE-cCCCeEEEEeCCCcccceecc-cCCcceEEEEE-C-CCCCEEEEec-------------------CC
Q psy10867 47 ----NDYVLGVE-KGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQA-S-PDAAYIAVSI-------------------ET 99 (343)
Q Consensus 47 ----~~~~~~~~-~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~-s-~~~~~l~~~~-------------------d~ 99 (343)
||+++... .+++.|.+.|+.+.++.++.. ........+++ + |+++++.++. ++
T Consensus 96 ~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 96 EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 77666554 445689999999998776443 23345788888 5 8999888752 34
Q ss_pred eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe---------------EEEeecCccceeeeeecCCCCC
Q psy10867 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT---------------ICVWQLSRLICKQTVAFGIPGS 164 (343)
Q Consensus 100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~---------------i~iwd~~~~~~~~~~~~~~~~~ 164 (343)
.+.++|.++.+...++.--. ....++++|+|+++++.+.+.. |.+.|....
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~------------- 241 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI------------- 241 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH-------------
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce-------------
Confidence 79999999988887776322 3467889999999998886542 223322211
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC--Cce-EEEeecCCcEEEEEEcCCCCEE
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT--GED-LLSLILDTRLTCVAFDGTEDNI 241 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~~~-~~~~~~~~~i~~~~~~~~~~~l 241 (343)
. .+.++|. +... +.+.+.|.++ ++. +..+.......++.++|||+++
T Consensus 242 ------------------~------~~v~~Gk--~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v 291 (595)
T 1fwx_A 242 ------------------E------KAIAAGD--YQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHL 291 (595)
T ss_dssp ------------------H------HHHHHTC--SEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEE
T ss_pred ------------------e------EeccCCC--eeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEE
Confidence 0 1334453 2222 4599999998 555 6677777788899999999988
Q ss_pred EEEc-CCCcEEEEEeecccccccccccCCCC-CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc---------
Q psy10867 242 YMGT-SEGVIKSFCLRQVPRTRDHHIQDSTS-NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS--------- 310 (343)
Q Consensus 242 ~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--------- 310 (343)
++++ .+.+|.++|+.+......-.+..... .... .-......++|+|+|...++.-.|+.|.+||+.+
T Consensus 292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~ 370 (595)
T 1fwx_A 292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEK 370 (595)
T ss_dssp EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCS
T ss_pred EEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccc
Confidence 8765 58899999999653110000000000 1111 1234578899999995555777899999999987
Q ss_pred -ceeeeecc-cCCce-----EEEEEccCCCeeeecc
Q psy10867 311 -RQCLRTIQ-HKGPV-----LGAFLGLLPPAIHDYD 339 (343)
Q Consensus 311 -~~~~~~~~-~~~~v-----~~~~~sp~~~~l~~~~ 339 (343)
.+.+.++. +..+- ....++|||++|++++
T Consensus 371 ~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 371 VDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp CCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred cceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 45666666 43322 1235689999999864
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.60 E-value=8e-13 Score=108.46 Aligned_cols=230 Identities=10% Similarity=0.037 Sum_probs=151.6
Q ss_pred CCCCEEEE-e-cCCeEEEEEccCC----ceEEEec------c-cCCCeEEEEEecCCCEEEEecCC------CeEEEeec
Q psy10867 88 PDAAYIAV-S-IETKLHMWQISSG----RLLATAS------S-HYQPITIVKWSADSNFIVTGGED------GTICVWQL 148 (343)
Q Consensus 88 ~~~~~l~~-~-~d~~i~v~~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~ 148 (343)
+++++|.+ + .++.|+++|+.+. +...+++ . ....-..+...|++ .++++..+ |.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 78888886 3 5789999998755 5555553 1 11234567888999 66665554 78999999
Q ss_pred CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee-------------------CCCeE
Q psy10867 149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS-------------------HDRTC 209 (343)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-------------------~d~~i 209 (343)
.+.+...++..+ ......-..+.|+|++ +.+++.. ...+|
T Consensus 172 ~T~~v~~~~~~~-------------------~~~~~~~Yd~~~~p~~--~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V 230 (462)
T 2ece_A 172 YSFEPLGKWEID-------------------RGDQYLAYDFWWNLPN--EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRI 230 (462)
T ss_dssp TTCCEEEECCSB-------------------CTTCCCCCCEEEETTT--TEEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred CCCeEEEEEccC-------------------CCCccccceEEECCCC--CEEEEccCcCccccccccchhhhhhccCCEE
Confidence 988766554311 0111223468889998 6777764 37899
Q ss_pred EEEecCCCceEEEeecC---CcEEEEEE--cCCCCEEEEEc------CCCcEEEEEeeccccc--ccccccCCCCCCcc-
Q psy10867 210 KIFDLCTGEDLLSLILD---TRLTCVAF--DGTEDNIYMGT------SEGVIKSFCLRQVPRT--RDHHIQDSTSNPDF- 275 (343)
Q Consensus 210 ~~wd~~~~~~~~~~~~~---~~i~~~~~--~~~~~~l~~~~------~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~- 275 (343)
.+||+.+++.+.++... .....+.| +|+++++++++ .+++|.+|......-. ..+.+........+
T Consensus 231 ~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp 310 (462)
T 2ece_A 231 HFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLP 310 (462)
T ss_dssp EEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCC
T ss_pred EEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccc
Confidence 99999999888888764 34556656 99999998877 4568887766531100 00000000000011
Q ss_pred ------ccccCcEEEEEEccCCCEEEEEeC-CCcEEEEeccc---ceeeeecccCC---------------ceEEEEEcc
Q psy10867 276 ------IGHEKQVTSLSCSITGITLLSSSA-DETLKIWHTIS---RQCLRTIQHKG---------------PVLGAFLGL 330 (343)
Q Consensus 276 ------~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~~~---------------~v~~~~~sp 330 (343)
.+-......+.+||||++|.++.. .+.|.+||+.. .+.+..+...+ ....++++|
T Consensus 311 ~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp 390 (462)
T 2ece_A 311 EILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR 390 (462)
T ss_dssp GGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT
T ss_pred ccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC
Confidence 111245788999999998876654 68999999863 35555554321 368899999
Q ss_pred CCCeeeecc
Q psy10867 331 LPPAIHDYD 339 (343)
Q Consensus 331 ~~~~l~~~~ 339 (343)
||++|++++
T Consensus 391 DGk~LyVaN 399 (462)
T 2ece_A 391 DGRRVYVTN 399 (462)
T ss_dssp TSSEEEEEC
T ss_pred CCCEEEEEc
Confidence 999999876
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.59 E-value=7.8e-14 Score=113.85 Aligned_cols=253 Identities=8% Similarity=-0.140 Sum_probs=162.8
Q ss_pred ceEEEEEcCCC----eEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec-----------CCeEEEEEccCCceE
Q psy10867 48 DYVLGVEKGKP----MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI-----------ETKLHMWQISSGRLL 112 (343)
Q Consensus 48 ~~~~~~~~~~~----~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------d~~i~v~~~~~~~~~ 112 (343)
.+++++...++ .|.++|..+++.+..+.....+ .+.++||++++.++. ++.|.+||+.+++.+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 34555555445 8889999999988666544455 799999998888642 578999999999999
Q ss_pred EEeccc-------CCCeEEEEEecCCCEEEEecC--CCeEEE--eecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867 113 ATASSH-------YQPITIVKWSADSNFIVTGGE--DGTICV--WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ 181 (343)
Q Consensus 113 ~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
.++... ......+.++|||++++++.. +..+.+ +|..+ ...+. . +
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~--------------------v-~ 165 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK--------------------S-A 165 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE--------------------C-S
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE--------------------C-C
Confidence 887533 123568999999999998864 467888 99877 22221 0 0
Q ss_pred cccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-----CceEEE----ee-cCCcEEEEEEcCCCCEEEEEcCCCcEE
Q psy10867 182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-----GEDLLS----LI-LDTRLTCVAFDGTEDNIYMGTSEGVIK 251 (343)
Q Consensus 182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-----~~~~~~----~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~ 251 (343)
. +..+.|++. ..+++.+.|+.+.+.|+.+ ++.... +. ...+. . .+++..++..+. +.+.
T Consensus 166 --~---~~~~~p~g~-~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~ 234 (368)
T 1mda_H 166 --S---CFHIHPGAA-ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSIL 234 (368)
T ss_dssp --S---CCCCEEEET-TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCE
T ss_pred --C---ceEEccCCC-eEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEE
Confidence 0 022345554 4556677788888888876 433211 11 12233 3 666676666666 9999
Q ss_pred EEEeeccccc--ccccccCCC-CCCccccccCcEEEEEEccCCCEEEEEeC---------CCcEEEEecccceeeeeccc
Q psy10867 252 SFCLRQVPRT--RDHHIQDST-SNPDFIGHEKQVTSLSCSITGITLLSSSA---------DETLKIWHTISRQCLRTIQH 319 (343)
Q Consensus 252 i~d~~~~~~~--~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~ 319 (343)
+.|+...... ..+.+.... ..... .......++++||++.++.+.. ++.+.++|+.+++.+.++..
T Consensus 235 viD~~~~~~~v~~~~~~~~~~~~~~~~--~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v 312 (368)
T 1mda_H 235 QGDIPAAGATMKAAIDGNESGRKADNF--RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN 312 (368)
T ss_dssp EEECCSSCCEEECCCCSSCTHHHHTTE--EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE
T ss_pred EEECCCCcceEEEEEEecccccccccc--ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC
Confidence 9998642211 101000000 00000 0111122689999988776533 23566999999999999985
Q ss_pred CCceEEEEEccCCCeeeecc
Q psy10867 320 KGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 320 ~~~v~~~~~sp~~~~l~~~~ 339 (343)
......++|+|||++++.++
T Consensus 313 g~~p~gi~~s~Dg~~l~va~ 332 (368)
T 1mda_H 313 GHDSDAIIAAQDGASDNYAN 332 (368)
T ss_dssp EEEECEEEECCSSSCEEEEE
T ss_pred CCCcceEEECCCCCEEEEEc
Confidence 55789999999999765544
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.59 E-value=7.1e-14 Score=113.94 Aligned_cols=278 Identities=10% Similarity=0.004 Sum_probs=178.6
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA 86 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 86 (343)
.++.++.++.|..|| .+++.+..+..+.. .+.++...+++.+.++ .. + +..+|. +++................+
T Consensus 32 ~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~-t~-~-l~~~d~-~g~~~~~~~~~~~~~~~~~~ 105 (330)
T 3hxj_A 32 TIYLGSSNKNLYAIN-TDGSVKWFFKSGEI-IECRPSIGKDGTIYFG-SD-K-VYAINP-DGTEKWRFDTKKAIVSDFTI 105 (330)
T ss_dssp CEECSSTTTTTEEEC-TTSCEEESSCGGGE-EEECCEETTTTEECCS-SC-E-EEEECC-CGGGGGGSCC-----CCEEE
T ss_pred eEEEEcCCCEEEEEC-CCCcEEEEEecCCC-cccceEEecCCcEEEe-cC-c-EEEECC-CCcEEEEEECCCCcccCceE
Confidence 455566678899999 88988777665554 5677777778876664 34 3 888886 55544333222222222333
Q ss_pred CCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867 87 SPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG 166 (343)
Q Consensus 87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 166 (343)
. ++.+.+++.++.|..+|.. ++.......+...+.++...+++. ++.++.++.|..+|.. +......
T Consensus 106 ~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~--------- 172 (330)
T 3hxj_A 106 F-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRF--------- 172 (330)
T ss_dssp E-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEE---------
T ss_pred E-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEE---------
Confidence 3 6666667778999999988 777766665555566677776666 6667788999999988 5433322
Q ss_pred CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEc
Q psy10867 167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 245 (343)
......+.++...+++ .+ ..++ +.+..+| .+++....... ...+.++...+++. |++++
T Consensus 173 -------------~~~~~~~~~~~~d~~g--~l-~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t 232 (330)
T 3hxj_A 173 -------------KTNDAITSAASIGKDG--TI-YFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTS 232 (330)
T ss_dssp -------------ECSSCCCSCCEECTTC--CE-EEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEE
T ss_pred -------------ecCCCceeeeEEcCCC--EE-EEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEc
Confidence 1223445666676666 44 4444 8899999 78877776653 34577888888775 55566
Q ss_pred CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceE
Q psy10867 246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324 (343)
Q Consensus 246 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~ 324 (343)
.++.+..+|.. ..... .+......+..+.+.+++ .|..++.+|.|..+|. +++.+..+. ....+.
T Consensus 233 ~~~gl~~~~~~-g~~~~-----------~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~ 298 (330)
T 3hxj_A 233 LDGHLYAINPD-GTEKW-----------RFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIA 298 (330)
T ss_dssp TTTEEEEECTT-SCEEE-----------EEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCS
T ss_pred CCCeEEEECCC-CCEeE-----------EeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCcccc
Confidence 67788888642 22211 111122223344555555 5667778888999995 777777766 555677
Q ss_pred EEEEccCCCeeee
Q psy10867 325 GAFLGLLPPAIHD 337 (343)
Q Consensus 325 ~~~~sp~~~~l~~ 337 (343)
++...++++..+.
T Consensus 299 ~~~~d~~g~l~~g 311 (330)
T 3hxj_A 299 TPVIDENGTIYFG 311 (330)
T ss_dssp CCEECTTCCEEEE
T ss_pred ceEEcCCCEEEEE
Confidence 7788788876654
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=8.2e-13 Score=118.37 Aligned_cols=227 Identities=14% Similarity=0.100 Sum_probs=145.6
Q ss_pred CCcceEEEEECCCCCEEEEe-----cC-CeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCC---------
Q psy10867 77 CPGRISSMQASPDAAYIAVS-----IE-TKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG--------- 141 (343)
Q Consensus 77 ~~~~v~~~~~s~~~~~l~~~-----~d-~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------- 141 (343)
+...+..++|||||++||-+ .+ ..|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 44578899999999999842 11 479999999998654311 11112467899 999998887764
Q ss_pred ----eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEE-Eee---CCCeEEEE
Q psy10867 142 ----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVA-SVS---HDRTCKIF 212 (343)
Q Consensus 142 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~-~~~---~d~~i~~w 212 (343)
.|++|++.+..... ..+..... |......+.++|++ ++|+ +.+ .++.|+++
T Consensus 205 ~~~~~v~~~~lgt~~~~~------------------~~v~~~~~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~~i~~~ 264 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDD------------------RLVFGAIPAQHHRYVGATVTEDD--RFLLISAANSTSGNRLYVK 264 (693)
T ss_dssp CCCCEEEEEETTSCGGGC------------------EEEESCSGGGCCSEEEEEECTTS--CEEEEEEESSSSCCEEEEE
T ss_pred CCCcEEEEEECCCCcccc------------------eEEEecCCCCCeEEEEEEEcCCC--CEEEEEEccCCCCcEEEEE
Confidence 39999987753211 12222233 44557889999999 5554 333 23589999
Q ss_pred ecCCCc-eEEEee-cCCcEEEEEEcCCCCEEEEEcC----CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867 213 DLCTGE-DLLSLI-LDTRLTCVAFDGTEDNIYMGTS----EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS 286 (343)
Q Consensus 213 d~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 286 (343)
|+.++. ....+. ........ +++++..|+..+. .+.|..+|+....... ...+..|...+. .
T Consensus 265 d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~---------~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 265 DLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH---------WRDLIPERQQVL--T 332 (693)
T ss_dssp ETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG---------CEEEECCCSSCE--E
T ss_pred ECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc---------cEEEecCCCCEE--E
Confidence 998764 233333 33334443 6677776665443 3578888887643210 123444555554 8
Q ss_pred EccCCCEEEEEeCCC---cEEEEecccceeeeecc--cCCceEEEEEccCCCeeeec
Q psy10867 287 CSITGITLLSSSADE---TLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 287 ~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~ 338 (343)
|+++++.|+....++ .|++|++..+ ....+. ..+.+..+.++|+++.|+..
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEE
Confidence 899998887665543 6899998744 344444 44567788888888876643
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.53 E-value=4.8e-12 Score=112.52 Aligned_cols=255 Identities=11% Similarity=0.076 Sum_probs=165.2
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecC-CC---CcceE-EEEeCCceEEEEEcC-----CCeEEEEeCCCcccceecc
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGA-SV---LSPHS-MCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRL 75 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~---~~v~~-~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~ 75 (343)
..+|.++.|+.|..+|..+|+.+.++..+ .. ..+.+ ... .++.+++.... ++.|..+|..+++.+..+.
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 45777788999999999999999998865 20 01221 122 25666665542 5899999999998774332
Q ss_pred cCCc--------------------------------ceEEEEECCCCCEEEEe-cC-------------------CeEEE
Q psy10867 76 ICPG--------------------------------RISSMQASPDAAYIAVS-IE-------------------TKLHM 103 (343)
Q Consensus 76 ~~~~--------------------------------~v~~~~~s~~~~~l~~~-~d-------------------~~i~v 103 (343)
.... ....+++.|++.++..+ .+ +.|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 1110 11256788887777753 22 25999
Q ss_pred EEccCCceEEEecc--cC-------CCeEEEEEecCC---CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccc
Q psy10867 104 WQISSGRLLATASS--HY-------QPITIVKWSADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG 171 (343)
Q Consensus 104 ~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (343)
+|..+|+.+..++. |. ....-+....+| ..++.++.+|.+.++|..+++.+....+....-. .....
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~-~~~d~ 366 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA-SGYDK 366 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE-EEECT
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc-cccCC
Confidence 99999998877653 21 122233344477 6899999999999999999988877654321100 00000
Q ss_pred ccceee------------eecccc--cceEEEEeecCCCceEEEEeeC--------------------------------
Q psy10867 172 LTEPLH------------VKSQHS--LPVTHVTLSKLGAKSRVASVSH-------------------------------- 205 (343)
Q Consensus 172 ~~~~~~------------~~~~~~--~~v~~~~~~~~~~~~~l~~~~~-------------------------------- 205 (343)
...++. ...+.. ..-..++++|+. .++++...
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT--GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT--TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCC--CEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 000000 000000 001256778876 45555332
Q ss_pred -----------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867 206 -----------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 206 -----------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 264 (343)
.+.|..||+.+++.+.++.+..+.....+...+..+++++.||.+++||.++.+....+
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 27899999999999999887766666667778889999999999999999987765544
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.52 E-value=8e-12 Score=111.36 Aligned_cols=257 Identities=9% Similarity=0.055 Sum_probs=161.3
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecC-CCCcceEEEEeC---CceEEEEEc-----CCCeEEEEeCCCcccceeccc
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGA-SVLSPHSMCLLG---NDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLI 76 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~---~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~ 76 (343)
..+|.++.|+.|..+|..+|+.+.++... .......+..+| ++.+++... .+|.|..||..+++.+..+..
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 46777888999999999999999888763 110111222222 666666543 258999999999987643321
Q ss_pred C---C----------------------------cceEEEEECCCCCEEEEe-cCC-------------------eEEEEE
Q psy10867 77 C---P----------------------------GRISSMQASPDAAYIAVS-IET-------------------KLHMWQ 105 (343)
Q Consensus 77 ~---~----------------------------~~v~~~~~s~~~~~l~~~-~d~-------------------~i~v~~ 105 (343)
. . ..-..+++.|++.++..+ .++ .|..+|
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD 281 (689)
T 1yiq_A 202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVN 281 (689)
T ss_dssp SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEE
T ss_pred cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEE
Confidence 0 0 011256788877777763 333 499999
Q ss_pred ccCCceEEEecc--cC-------CCeEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCC-------CCC
Q psy10867 106 ISSGRLLATASS--HY-------QPITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPG-------SSG 166 (343)
Q Consensus 106 ~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~ 166 (343)
.++|+.+..++. |. .+........+++ .++.++.+|.++++|..+++.+....+.... ...
T Consensus 282 ~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~ 361 (689)
T 1yiq_A 282 ADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTG 361 (689)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTT
T ss_pred ccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCC
Confidence 999999877753 21 1222222333565 7889999999999999999887655432210 000
Q ss_pred Ccc--------ccccceeeeecccc--cceEEEEeecCCCceEEEEeeC-------------------------------
Q psy10867 167 KGV--------TGLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVASVSH------------------------------- 205 (343)
Q Consensus 167 ~~~--------~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~------------------------------- 205 (343)
... ....+......+.. ..-..++++|+. .++++...
T Consensus 362 ~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 362 RPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT--GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp EEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT--TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC--CEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 000 00000000000000 011236677765 44444311
Q ss_pred --------------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867 206 --------------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 206 --------------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 264 (343)
+|.|+.||+.+++.+.++....+...-.+...+.++++++.||.++.||.++++...++
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 48899999999999999887665555566677889999999999999999987765443
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.52 E-value=2.3e-11 Score=99.91 Aligned_cols=232 Identities=10% Similarity=0.013 Sum_probs=147.9
Q ss_pred eEEEecCCCCeEEEEecCCc----eEEEEEe-------cCCCCcceEEEEeCCceEEEEEcCC------CeEEEEeCCCc
Q psy10867 6 EVAFSYDGSGAISVWEPKGG----TLLMSYK-------GASVLSPHSMCLLGNDYVLGVEKGK------PMIQAWPVNSQ 68 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~----~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~------~~i~iw~~~~~ 68 (343)
.+.+++-.++.|+|.|+.+. +..++++ .... ....+..+|+| ++++...+ |.|.++|.++.
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 35556666899999998765 6677773 1222 56778889999 55554443 68999999999
Q ss_pred ccceecccCC---cceEEEEECCCCCEEEEec--------------------CCeEEEEEccCCceEEEeccc-C-CCeE
Q psy10867 69 EKAQLRLICP---GRISSMQASPDAAYIAVSI--------------------ETKLHMWQISSGRLLATASSH-Y-QPIT 123 (343)
Q Consensus 69 ~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~--------------------d~~i~v~~~~~~~~~~~~~~~-~-~~v~ 123 (343)
+.+....... ..-..+.|+|+++.++++. ..+|.+||+.+++.++++... . ....
T Consensus 175 ~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~ 254 (462)
T 2ece_A 175 EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMAL 254 (462)
T ss_dssp CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEE
T ss_pred eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccc
Confidence 8886554221 2244688899999988874 679999999998888777642 1 2345
Q ss_pred EEEE--ecCCCEEEEec------CCCeEEEeecCccceee--eeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867 124 IVKW--SADSNFIVTGG------EDGTICVWQLSRLICKQ--TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK 193 (343)
Q Consensus 124 ~~~~--~~~~~~l~s~~------~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (343)
.+.| +|++++++.+. .+++|.+|..+.+.... .+.......... .......+.+-......+.+++
T Consensus 255 ~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~----lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 255 ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN----LPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS----CCGGGGGGTEECCCCCCEEECT
T ss_pred eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc----ccccccccccCCCceeEEEECC
Confidence 6666 99999877766 46688887765432111 110000000000 0000000000024578899999
Q ss_pred CCCceEEEE-eeCCCeEEEEecCC---CceEEEeecCC---------------cEEEEEEcCCCCEEEEEc
Q psy10867 194 LGAKSRVAS-VSHDRTCKIFDLCT---GEDLLSLILDT---------------RLTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 194 ~~~~~~l~~-~~~d~~i~~wd~~~---~~~~~~~~~~~---------------~i~~~~~~~~~~~l~~~~ 245 (343)
++ ++|.+ .-..+.|.+||+.. .+.+..+...+ ....++++|+|++|+++.
T Consensus 331 DG--rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DD--KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TS--CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CC--CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99 45544 44578999999863 34444444331 368899999999999986
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.50 E-value=2.7e-14 Score=117.90 Aligned_cols=256 Identities=10% Similarity=0.021 Sum_probs=140.4
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCc-ceE-
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG-RIS- 82 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~-~v~- 82 (343)
...+|.++.||.|+.||..+|+.+.+++. . .+.+..+.+++.++++++.|+.|..||..+++.+.....+.. .+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~-~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--D-PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--C-CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--C-CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 45788888999999999999999999887 3 555555667787777777779999999988887644332211 110
Q ss_pred EEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867 83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP 162 (343)
Q Consensus 83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 162 (343)
...+..++.+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.|+.|+.||.++++.......
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--- 158 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY--- 158 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE---
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec---
Confidence 1111134444445778999999999999887776543 234567888899999999999999999876554320
Q ss_pred CCCCCccccccceeeeecccccceEEEEeecCC-CceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEE-EEEcCCCCE
Q psy10867 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG-AKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTC-VAFDGTEDN 240 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~-~~~~~~~~~ 240 (343)
. .. ....+.++. ....+++++.+|.++.||.++++.+..+....++.. ..+++++..
T Consensus 159 --------------~---~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 159 --------------F---DY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp --------------E---EE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred --------------c---cc----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 0 01 112222210 002567788999999999999999998887776654 344455542
Q ss_pred E----EEEcCCCcEEEEEeeccc----ccccccccCCCCCCccccccCcEEEEEEcc--CCCEEEEEeCCCcEEEEecc
Q psy10867 241 I----YMGTSEGVIKSFCLRQVP----RTRDHHIQDSTSNPDFIGHEKQVTSLSCSI--TGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 241 l----~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~ 309 (343)
. +.+ ++.++.+|..+++ ...... .. ..+. +| .+..|+.++.||.++.++..
T Consensus 218 ~v~~~~~~--~~~l~~ld~~tG~~~~~~~W~~~---------~~---~~~~----sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 218 KVMHINVA--VETLRYLTFMSGEVGRITKWKYP---------FP---KETE----AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp EECCEEEE--HHHHHHHHHHHHHHHHHHTSCCC---------CC---CHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred eccceeec--ccceeeeehhcCCcccceeeeec---------cC---cccc----ccccccceEEEecccCCEEecCcc
Confidence 1 112 3445666665543 222111 00 1110 12 23467777888888888765
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.48 E-value=1.9e-14 Score=118.80 Aligned_cols=204 Identities=13% Similarity=0.101 Sum_probs=114.8
Q ss_pred CCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867 89 DAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKG 168 (343)
Q Consensus 89 ~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (343)
++.+++++.|+.|+.||..+|+.+..+.. +.+.+..+..++..+++++.||.|+.||..+++........
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~-------- 78 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT-------- 78 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC--------
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc--------
Confidence 34444457899999999999999888775 45555556667778888899999999999887654432100
Q ss_pred cccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867 169 VTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG 248 (343)
Q Consensus 169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 248 (343)
.... ....++ +. .+ ..+++++.++.++.||.++|+.+..+..... ..++|++..+++++.++
T Consensus 79 -------~~~~-~~~sp~----~~-~~--~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg 140 (369)
T 2hz6_A 79 -------IPEL-VQASPC----RS-SD--GILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEY 140 (369)
T ss_dssp -------HHHH-HTTCSC----C--------CCCCEEEEEEEEECCC-------------------------EEEEEEEE
T ss_pred -------Cccc-cccCce----Ee-cC--CEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCC
Confidence 0000 001111 11 22 4678888999999999999999887765432 34567888999999999
Q ss_pred cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCC---CEEEEEeCCCcEEEEecccceeeeecccCCceEE
Q psy10867 249 VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITG---ITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG 325 (343)
Q Consensus 249 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~ 325 (343)
.|+.||.++++..... ..+ ......++++. ..+++++.||.|+.||..+|+.+.++....++..
T Consensus 141 ~v~a~d~~tG~~~W~~-----------~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~ 207 (369)
T 2hz6_A 141 TITMYDTKTRELRWNA-----------TYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA 207 (369)
T ss_dssp EEECCCSSSSSCCCEE-----------EEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred EEEEEECCCCCEEEeE-----------ecc--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence 9999999876543322 111 11222333332 5677888999999999999999988885566544
Q ss_pred -EEEccCCC
Q psy10867 326 -AFLGLLPP 333 (343)
Q Consensus 326 -~~~sp~~~ 333 (343)
..+++++.
T Consensus 208 ~~~~~~dg~ 216 (369)
T 2hz6_A 208 FYVWQREGL 216 (369)
T ss_dssp EEECTTSSC
T ss_pred EEEecCCce
Confidence 45666764
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.48 E-value=1.7e-10 Score=89.20 Aligned_cols=211 Identities=9% Similarity=0.063 Sum_probs=145.9
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEc--CCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEE-E-ecCC
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEK--GKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIA-V-SIET 99 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-~-~~d~ 99 (343)
.+.+.++..........++|+|++.+.++.. .++.|+++|+.+++.+..... .......+++. +..|. + -.++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4567777654431358999999887777654 257999999999998765432 11222345554 44444 3 3578
Q ss_pred eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
.+.++|..+.+.+.++...... ...+++|++.++.+..++.|.++|..+.+....+.. ...
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V-----------------g~~ 147 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV-----------------KYN 147 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC-----------------EET
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE-----------------CCC
Confidence 9999999999988888532111 234566888777777788999999998776655431 110
Q ss_pred cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--------------CcEEEEEEcCCCCEEEE-E
Q psy10867 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TRLTCVAFDGTEDNIYM-G 244 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~-~ 244 (343)
...-..++.+.+. ++ .+++....++.|.+.|..+++.+..+... .....++|+|+++.+++ +
T Consensus 148 ~~p~~~~nele~~-dg--~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 148 GHRVIRLNELEYI-NG--EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp TEECCCEEEEEEE-TT--EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CcccccceeEEEE-CC--EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 0111236677877 56 56666667899999999999999888742 35689999999876655 5
Q ss_pred cCCCcEEEEEeeccc
Q psy10867 245 TSEGVIKSFCLRQVP 259 (343)
Q Consensus 245 ~~d~~i~i~d~~~~~ 259 (343)
...+.+...++....
T Consensus 225 k~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 225 KLWPKLFEIKLHLVR 239 (266)
T ss_dssp TTCSEEEEEEEEECC
T ss_pred CCCCeEEEEEEeccc
Confidence 568899999988743
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.3e-11 Score=101.09 Aligned_cols=198 Identities=8% Similarity=0.021 Sum_probs=128.2
Q ss_pred cceEEEEeCCceEEEEEcC-----CCeEEEEeCCCcccceeccc------CCcceEEEEECCCC-CEEEE-e---cCCeE
Q psy10867 38 SPHSMCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI------CPGRISSMQASPDA-AYIAV-S---IETKL 101 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~------~~~~v~~~~~s~~~-~~l~~-~---~d~~i 101 (343)
.+..+++++++++.++... ++.|.+||+.+++.+..+.. +...+..+++++++ ..+++ . .++.|
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i 147 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAAL 147 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEE
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeE
Confidence 7899999999988877643 47899999998875543321 22356899999865 44444 3 56899
Q ss_pred EEEEccCCceEEEecccC-----------------------------CCeEEEEEecCCCEEEEecCCC-eEEEeecCcc
Q psy10867 102 HMWQISSGRLLATASSHY-----------------------------QPITIVKWSADSNFIVTGGEDG-TICVWQLSRL 151 (343)
Q Consensus 102 ~v~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~ 151 (343)
.+||+.+++....+.+|. ..+..|+|+|+++.|+.+..++ .+..++....
T Consensus 148 ~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~ 227 (343)
T 2qe8_A 148 IRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADL 227 (343)
T ss_dssp EEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHH
T ss_pred EEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHh
Confidence 999999888766654421 2357899999999888876655 4444433210
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcE
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRL 229 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i 229 (343)
... .+. . ......+ ...++......+++++++ .++++...++.|.+||..+++....... ...+
T Consensus 228 ~~~-~~~-------~---~~~~~~~-~~~g~~g~pdgia~d~~G--~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p 293 (343)
T 2qe8_A 228 SNL-QLT-------D---AELGSKI-ERYSEKPICDGISIDKDH--NIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWT 293 (343)
T ss_dssp TCT-TCC-------H---HHHHTTC-EEEEECCSCSCEEECTTC--CEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCE
T ss_pred cCC-CCC-------h---hhhhcce-EecccCCCCceEEECCCC--CEEEEccCCCeEEEEECCCCCEEEEEECCceecC
Confidence 000 000 0 0000000 111233456779999998 7888888899999999856654333322 3458
Q ss_pred EEEEEcCCCCEEEEEcCCCc
Q psy10867 230 TCVAFDGTEDNIYMGTSEGV 249 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~~~d~~ 249 (343)
..++|.+++.++++....+.
T Consensus 294 ~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 294 DSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp EEEEECTTSCEEEEECCGGG
T ss_pred CeeEECCCCcEEEEeCcccc
Confidence 89999999887777664443
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.47 E-value=5.4e-11 Score=105.76 Aligned_cols=303 Identities=10% Similarity=0.084 Sum_probs=183.2
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecCCCCc----------ceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLS----------PHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~ 74 (343)
...+|..+.++.|..+|..+|+.+.+++...... -..+++. ++++++ +..++.|..+|..+++.+...
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v-~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYV-GTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEE-ECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-CCEEEE-EcCCCEEEEEECCCCCEeeee
Confidence 4456677778899999999999999887543201 0123332 344444 455599999999999877443
Q ss_pred ccC-CcceEEEEECC---CCCEEEEec------CCeEEEEEccCCceEEEeccc---C----------------------
Q psy10867 75 LIC-PGRISSMQASP---DAAYIAVSI------ETKLHMWQISSGRLLATASSH---Y---------------------- 119 (343)
Q Consensus 75 ~~~-~~~v~~~~~s~---~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~---~---------------------- 119 (343)
... ......+..+| ++.+++... ++.|..+|..+|+.+..+... .
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 321 10001111111 455555432 589999999999988776421 0
Q ss_pred ------CCeEEEEEecCCCEEEEecCCCe-------------------EEEeecCccceeeeeecCCCCCCCCccccccc
Q psy10867 120 ------QPITIVKWSADSNFIVTGGEDGT-------------------ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE 174 (343)
Q Consensus 120 ------~~v~~~~~~~~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (343)
.....+++.|+...++.++.++. |..+|..+++....++.......
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~w--------- 294 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSW--------- 294 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS---------
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccc---------
Confidence 01124678888888888887763 99999999987776542100000
Q ss_pred eeeeecccccceEEEEeecCCC-ceEEEEeeCCCeEEEEecCCCceEEEeecCC-------------cE-----------
Q psy10867 175 PLHVKSQHSLPVTHVTLSKLGA-KSRVASVSHDRTCKIFDLCTGEDLLSLILDT-------------RL----------- 229 (343)
Q Consensus 175 ~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------~i----------- 229 (343)
.+ ....+.....+..++. ...++.++.+|.++++|.++|+.+....... ++
T Consensus 295 ---d~-~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 370 (668)
T 1kv9_A 295 ---DF-TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEP 370 (668)
T ss_dssp ---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSC
T ss_pred ---cc-cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCe
Confidence 00 0012222223333441 1268899999999999999999885543211 00
Q ss_pred -------------EEEEEcCCCCEEEEEc------------------------------------CCCcEEEEEeecccc
Q psy10867 230 -------------TCVAFDGTEDNIYMGT------------------------------------SEGVIKSFCLRQVPR 260 (343)
Q Consensus 230 -------------~~~~~~~~~~~l~~~~------------------------------------~d~~i~i~d~~~~~~ 260 (343)
..++++|+...+++.. .+|.|..||+.+.+.
T Consensus 371 ~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~ 450 (668)
T 1kv9_A 371 IVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA 450 (668)
T ss_dssp EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE
T ss_pred eEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE
Confidence 1267788777766522 236677788776554
Q ss_pred cccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce--EEEEEccCCCe
Q psy10867 261 TRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV--LGAFLGLLPPA 334 (343)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~~~~sp~~~~ 334 (343)
..... +........+...+.+++.++.|+.|+.||.++|+.+..++....+ .-+.+..+|+.
T Consensus 451 ~W~~~------------~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 451 AWKVP------------YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp EEEEE------------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred EEEcc------------CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 33221 1112222334456778899999999999999999999988733222 22344556653
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=8.7e-10 Score=86.83 Aligned_cols=246 Identities=7% Similarity=-0.049 Sum_probs=153.2
Q ss_pred EEEEEcCCCeEEEEeCCCcccc-----eecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCe
Q psy10867 50 VLGVEKGKPMIQAWPVNSQEKA-----QLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPI 122 (343)
Q Consensus 50 ~~~~~~~~~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v 122 (343)
+|..+.. +.|+.++++..... ..+......+..++|++++..|. + ..++.|..+++..+.....+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444444 57888888765432 11112234578999999765555 4 356799999987665444443333567
Q ss_pred EEEEEecCCCE-EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE
Q psy10867 123 TIVKWSADSNF-IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA 201 (343)
Q Consensus 123 ~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 201 (343)
..+++.|++.. +++-...+.|.++++...... ............++++|++. .+++
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----------------------~~~~~~~~~P~~i~vd~~~g-~lyv 138 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR----------------------VLFDTGLVNPRGIVTDPVRG-NLYW 138 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------------------EEECSSCSSEEEEEEETTTT-EEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE----------------------EEEECCCCCccEEEEeeCCC-EEEE
Confidence 89999996554 445556788999998653211 01111224568999999652 4444
Q ss_pred EeeC--CCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccc
Q psy10867 202 SVSH--DRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI 276 (343)
Q Consensus 202 ~~~~--d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 276 (343)
+... .+.|..+++.. +....+. .......++++|++..|+++. ..+.|.++|+........ ..
T Consensus 139 ~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~-----------~~ 206 (267)
T 1npe_A 139 TDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV-----------LE 206 (267)
T ss_dssp EECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE-----------EE
T ss_pred EECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE-----------ec
Confidence 4433 46888888753 3333332 234578999999887776654 567899999865322110 11
Q ss_pred cccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--CceEEEEEccCCC
Q psy10867 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--GPVLGAFLGLLPP 333 (343)
Q Consensus 277 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~ 333 (343)
.......++.. ++.++++....+.|..+|..+++.+.++... .....+++.|++.
T Consensus 207 -~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 207 -GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred -CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 12234566654 3444455556689999999999998888732 2578889998875
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.45 E-value=3.7e-11 Score=99.75 Aligned_cols=254 Identities=13% Similarity=0.063 Sum_probs=158.3
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcce-----
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRI----- 81 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v----- 81 (343)
.++.++.++.|..+|..+|+.+..+..... ........ ++.+++.. .++.+..+|..+++.+..........
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~-~~~~p~~~-~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKVAGE-ALSRPVVS-DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSC-CCSCCEEE-TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeCCCc-eEcCCEEE-CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 455666789999999999999988876653 22233333 45555544 45899999999988764433221110
Q ss_pred EEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCC-------eEEEEEec--CCCEEEEecCCCeEEEeecCccc
Q psy10867 82 SSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQP-------ITIVKWSA--DSNFIVTGGEDGTICVWQLSRLI 152 (343)
Q Consensus 82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~ 152 (343)
...... ++.+++...++.+..+|..+|+.+......... +..+.-.| .+..++.++.++.+..+|..+++
T Consensus 182 ~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~ 260 (376)
T 3q7m_A 182 SAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ 260 (376)
T ss_dssp CCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC
T ss_pred CCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc
Confidence 111111 455555567899999999999887665432110 00011111 34677788889999999999886
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cC-CcEE
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LD-TRLT 230 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~-~~i~ 230 (343)
...... ......+... + ..++.++.++.+..+|..+++.+.... .. ....
T Consensus 261 ~~w~~~------------------------~~~~~~~~~~--~--~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~ 312 (376)
T 3q7m_A 261 IMWKRE------------------------LGSVNDFIVD--G--NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT 312 (376)
T ss_dssp EEEEEC------------------------CCCEEEEEEE--T--TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC
T ss_pred EEeecc------------------------CCCCCCceEE--C--CEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc
Confidence 554331 1122333333 3 467778889999999999999887765 22 2222
Q ss_pred EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEE-EEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT-SLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
.... .+..|++++.+|.++++|..+.+...... .....+. .... .+..|+.++.+|.|+.|+
T Consensus 313 ~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~-----------~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 313 SPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK-----------VDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE-----------CCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe-----------cCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 2333 25789999999999999988765433221 1111111 1122 245788888999999887
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.43 E-value=6.2e-11 Score=103.24 Aligned_cols=305 Identities=10% Similarity=0.043 Sum_probs=180.7
Q ss_pred ceEEEecCC-CCeEEEEec-CCceEEEEEecCCCCcc----------eEEEEeCCceEEEEEcCCCeEEEEeCCCcccce
Q psy10867 5 NEVAFSYDG-SGAISVWEP-KGGTLLMSYKGASVLSP----------HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ 72 (343)
Q Consensus 5 ~~~~~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~ 72 (343)
...+|..+. ++.|.-+|. .+|+.+.+++......+ ..+++. ++++++. ..++.+..+|..+++.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~-~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKK-QANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEE-CTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-CCEEEEE-eCCCEEEEEECCCCCEEE
Confidence 345667777 889999999 99999988765432011 123332 4455544 445899999999998774
Q ss_pred ecccCC--c--ceEE-EEECCCCCEEEEec------CCeEEEEEccCCceEEEecccCCC--------------------
Q psy10867 73 LRLICP--G--RISS-MQASPDAAYIAVSI------ETKLHMWQISSGRLLATASSHYQP-------------------- 121 (343)
Q Consensus 73 ~~~~~~--~--~v~~-~~~s~~~~~l~~~~------d~~i~v~~~~~~~~~~~~~~~~~~-------------------- 121 (343)
...... . .+.+ ... .++.+++.+. ++.|..+|..+|+.+.++......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~ 218 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFG 218 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSS
T ss_pred EecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccc
Confidence 332111 0 1111 011 1566665543 789999999999988766432110
Q ss_pred -----------------e-EEEEEecCCCEEEEecCC----------------CeEEEeecCccceeeeeecCCCCCCCC
Q psy10867 122 -----------------I-TIVKWSADSNFIVTGGED----------------GTICVWQLSRLICKQTVAFGIPGSSGK 167 (343)
Q Consensus 122 -----------------v-~~~~~~~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 167 (343)
+ ..+++.++...++.+..+ +.|..+|..+++....++......
T Consensus 219 ~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~--- 295 (571)
T 2ad6_A 219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE--- 295 (571)
T ss_dssp HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS---
T ss_pred cccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc---
Confidence 0 135566666666665532 358999999988776554210000
Q ss_pred ccccccceeeeecccccceEEEEeecCCCc-eEEEEeeCCCeEEEEecCCCceEEEeecCC--------------cE---
Q psy10867 168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSHDRTCKIFDLCTGEDLLSLILDT--------------RL--- 229 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--------------~i--- 229 (343)
........++. +....++.. ..++.++.+|.++++|.++++.+....... ++
T Consensus 296 ---------~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~ 365 (571)
T 2ad6_A 296 ---------WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDP 365 (571)
T ss_dssp ---------SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECG
T ss_pred ---------cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceeccc
Confidence 00001112221 222234510 256778889999999999999988765322 11
Q ss_pred -----------------------EEEEEcCCCCEEEEEcC-------------------------------------CCc
Q psy10867 230 -----------------------TCVAFDGTEDNIYMGTS-------------------------------------EGV 249 (343)
Q Consensus 230 -----------------------~~~~~~~~~~~l~~~~~-------------------------------------d~~ 249 (343)
..++++|+..++++... +|.
T Consensus 366 ~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~ 445 (571)
T 2ad6_A 366 EFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQ 445 (571)
T ss_dssp GGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEE
T ss_pred ccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCe
Confidence 23578888888877643 356
Q ss_pred EEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCce--EEEE
Q psy10867 250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV--LGAF 327 (343)
Q Consensus 250 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~~~ 327 (343)
|..||+.+.+...... +...+....+...+..++.++.||.|+.+|.++|+.+.+++....+ .-+.
T Consensus 446 l~a~D~~tG~~~W~~~------------~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~ 513 (571)
T 2ad6_A 446 IRAFDLTTGKAKWTKW------------EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMT 513 (571)
T ss_dssp EEEECTTTCCEEEEEE------------ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred EEEEECCCCCEEEEec------------CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEE
Confidence 6677766544332211 1111222222334567777999999999999999999998733322 2244
Q ss_pred EccCCCeeee
Q psy10867 328 LGLLPPAIHD 337 (343)
Q Consensus 328 ~sp~~~~l~~ 337 (343)
+..+|+.++.
T Consensus 514 ~~~~G~~yv~ 523 (571)
T 2ad6_A 514 YSFKGKQYIG 523 (571)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEE
Confidence 5677776554
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.43 E-value=8.3e-09 Score=94.17 Aligned_cols=292 Identities=10% Similarity=0.041 Sum_probs=187.2
Q ss_pred CeEEEEecCCceEEEEEe-cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-------CCcceEEEEE
Q psy10867 15 GAISVWEPKGGTLLMSYK-GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-------CPGRISSMQA 86 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-------~~~~v~~~~~ 86 (343)
+.|..||..+++...... .... .|.++...+++.+.++... +-+.+||..+++....... ....|.++..
T Consensus 193 ~Gl~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 270 (795)
T 4a2l_A 193 DGLYTYSITQKTFEKVIPILGTK-QIQAILQQSPTRIWVATEG-AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAM 270 (795)
T ss_dssp SCEEEEETTTCCEEECC----CC-CEEEEEEEETTEEEEEEBS-SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEE
T ss_pred CCEEEEeCCCCeEEEecCCCCCC-eeEEEEEcCCCCEEEEECC-CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEE
Confidence 458888877665443211 1234 7889988888888877755 3488899877654433221 2356999999
Q ss_pred CCCCCEEEEecCCeEEEEEccCCceEEEecc-------cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867 87 SPDAAYIAVSIETKLHMWQISSGRLLATASS-------HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF 159 (343)
Q Consensus 87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 159 (343)
.++|.+.+++.+ .|.+|+..+++....... ....|.++...++|. |..|+.++-|..++..+.........
T Consensus 271 d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~ 348 (795)
T 4a2l_A 271 DSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNI 348 (795)
T ss_dssp CTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCC
T ss_pred cCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCC
Confidence 999988887655 688999877654433211 235799999988876 55667777799998765432111000
Q ss_pred CCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee---------cCCcEE
Q psy10867 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI---------LDTRLT 230 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---------~~~~i~ 230 (343)
.. ...-....|.++...+++ .|..|+.++-|..||..+++...... ....|.
T Consensus 349 ---------------~~-~~~l~~~~V~~i~~d~~g---~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 349 ---------------PY-KNSLSDNVVSCIVEDKDK---NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp ---------------TT-SSSCSCSSEEEEEECTTS---CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred ---------------CC-CCCCCCCeeEEEEECCCC---CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 00 000124568899888877 36667788789999987765433221 135689
Q ss_pred EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
+++..++++.|.+|+.++-|.++|..+..... +.. .. . ......|.++...++|++.+.. .+ -|.+||..+
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~--~~--~--~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~ 480 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQ--RN--S--QLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQ 480 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECT--TT--S--CCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eec--CC--C--CcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCC
Confidence 99999988867778877779999876543211 100 00 0 0234578999988888755544 44 588999877
Q ss_pred ceeeeecc-------cCCceEEEEEccCCCeeeec
Q psy10867 311 RQCLRTIQ-------HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 311 ~~~~~~~~-------~~~~v~~~~~sp~~~~l~~~ 338 (343)
++...... ....|.++...++|+..+..
T Consensus 481 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 481 RSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp TEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred CeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 65433221 23568899999888776543
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.40 E-value=3.5e-09 Score=83.37 Aligned_cols=248 Identities=8% Similarity=-0.038 Sum_probs=149.6
Q ss_pred EEEecCCCCeEEEEecCCceE-----EEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccCCcc
Q psy10867 7 VAFSYDGSGAISVWEPKGGTL-----LMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGR 80 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~ 80 (343)
+.|+.. +.|+.+++..... ...+..... .+..++++++ +.++++....+.|..++..+.............
T Consensus 4 l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~-~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 4 LLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAK-VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEE-EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred EEEEcC--CeEEEEEecCcccccccceeeecCCCC-cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 445442 4788888865432 112222223 6789999985 577777766789999998876543333223356
Q ss_pred eEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC---CCeEEEeecCccceee
Q psy10867 81 ISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE---DGTICVWQLSRLICKQ 155 (343)
Q Consensus 81 v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~ 155 (343)
...+++.|++..|. + ...+.|.+++++.................++++|++..|+.+.. .+.|..+++..... .
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-R 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-E
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-E
Confidence 78999999765444 4 34679999998754333233222245789999996665554443 36788888764211 1
Q ss_pred eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEc
Q psy10867 156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFD 235 (343)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~ 235 (343)
.+ ..........+++++++. .++++-...+.|.++|..................++..
T Consensus 160 -------------------~~--~~~~~~~P~gia~d~~~~-~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d 217 (267)
T 1npe_A 160 -------------------IL--AQDNLGLPNGLTFDAFSS-QLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY 217 (267)
T ss_dssp -------------------EE--ECTTCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE
T ss_pred -------------------EE--EECCCCCCcEEEEcCCCC-EEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe
Confidence 01 112234578899999763 55566667789999998755443333333345566664
Q ss_pred CCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867 236 GTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI 292 (343)
Q Consensus 236 ~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 292 (343)
+..|+++ ..++.|.++|..+......+. .+.......+++.|++.
T Consensus 218 --~~~lyva~~~~~~v~~~d~~~g~~~~~i~----------~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 218 --GKNLYYTDWKTNSVIAMDLAISKEMDTFH----------PHKQTRLYGITIALSQC 263 (267)
T ss_dssp --TTEEEEEETTTTEEEEEETTTTEEEEEEC----------CSSCCCCCCEEEECSCC
T ss_pred --CCEEEEEECCCCeEEEEeCCCCCceEEEc----------cccccccceeeecCccC
Confidence 4555555 456899999987654332211 11112356677777753
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.40 E-value=2.1e-11 Score=103.71 Aligned_cols=275 Identities=10% Similarity=-0.018 Sum_probs=167.7
Q ss_pred CCCeEEEEecCCceEEEEEecCCCCcceEEEE-e-CCceEEEEEc------------------CCCeEEEEeCCCcccce
Q psy10867 13 GSGAISVWEPKGGTLLMSYKGASVLSPHSMCL-L-GNDYVLGVEK------------------GKPMIQAWPVNSQEKAQ 72 (343)
Q Consensus 13 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~~------------------~~~~i~iw~~~~~~~~~ 72 (343)
.++.|.+-|+.+.+....+.-.....+..+++ + |++.++.++. .++.+.+.|.++.+...
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~ 189 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAW 189 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEE
Confidence 36789999999999888665443226788888 4 8887777763 33588999999887764
Q ss_pred ecccCCcceEEEEECCCCCEEEE-ecCC---------------eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEE
Q psy10867 73 LRLICPGRISSMQASPDAAYIAV-SIET---------------KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136 (343)
Q Consensus 73 ~~~~~~~~v~~~~~s~~~~~l~~-~~d~---------------~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 136 (343)
...... ....++++|+|+++.+ +.+. .|.+.|....+ .+.++|+....
T Consensus 190 qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~---------------~~v~~Gk~~~i 253 (595)
T 1fwx_A 190 QVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE---------------KAIAAGDYQEL 253 (595)
T ss_dssp EEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH---------------HHHHHTCSEEE
T ss_pred EEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee---------------EeccCCCeeEE
Confidence 443222 4567889999999887 3332 24444432221 12234444333
Q ss_pred ecCCCeEEEeecCc--cce-eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867 137 GGEDGTICVWQLSR--LIC-KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213 (343)
Q Consensus 137 ~~~dg~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd 213 (343)
+.|.+.|..+ +.. ...+. -.....++.++|+|. ..++++..+.++.++|
T Consensus 254 ----~~V~VID~~~~~~~~~~~~Ip-----------------------vg~~PhGv~~sPDGk-~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 254 ----NGVKVVDGRKEASSLFTRYIP-----------------------IANNPHGCNMAPDKK-HLCVAGKLSPTVTVLD 305 (595)
T ss_dssp ----TTEEEEECSGGGCCSSEEEEE-----------------------EESSCCCEEECTTSS-EEEEECTTSSBEEEEE
T ss_pred ----CcEEEEeCcccCCceeEEEEe-----------------------cCCCceEEEEcCCCC-EEEEeCCCCCeEEEEE
Confidence 4599999987 322 22221 123556899999994 4555666789999999
Q ss_pred cCCCc------------eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCc
Q psy10867 214 LCTGE------------DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ 281 (343)
Q Consensus 214 ~~~~~------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (343)
+.+.+ .............++|+|+|....+...|++|.+||+........-. .....+..+..|..+
T Consensus 306 ~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~-~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 306 VTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGE-KVDPIKDKLDVHYQP 384 (595)
T ss_dssp GGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTC-SCCCEEEEEECSSCE
T ss_pred CcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhccc-ccceeEEEeeccccc
Confidence 98663 34555567789999999999433445679999999988621100000 000112333333222
Q ss_pred -----EEEEEEccCCCEEEEEeC---CCcE----------EEEeccccee--eeecccCCceEEEEEccCC
Q psy10867 282 -----VTSLSCSITGITLLSSSA---DETL----------KIWHTISRQC--LRTIQHKGPVLGAFLGLLP 332 (343)
Q Consensus 282 -----v~~~~~s~~~~~l~s~~~---dg~i----------~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~ 332 (343)
-..+.++|||++|+++.. |+.+ .++|+..++. +...........+.+.|..
T Consensus 385 Gh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~ 455 (595)
T 1fwx_A 385 GHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPS 455 (595)
T ss_dssp EEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTT
T ss_pred ccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHH
Confidence 123356899999998753 4321 8899965542 2222233344445555544
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.39 E-value=1e-10 Score=95.18 Aligned_cols=215 Identities=13% Similarity=0.046 Sum_probs=149.2
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQA 86 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 86 (343)
.++.++.++.|..+|.. ++....+..+.. .+.++...+++.+.++..+ +.|..+|.. ++...........+.++..
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~-~~~~~~~~~~g~l~vgt~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKA-IYATPIVSEDGTIYVGSND-NYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSC-CCSCCEECTTSCEEEECTT-SEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCc-eeeeeEEcCCCEEEEEcCC-CEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 45556667889999988 888777776665 6778888888887776554 889999988 6655444444456677778
Q ss_pred CCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCC
Q psy10867 87 SPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSG 166 (343)
Q Consensus 87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 166 (343)
.+++.+.+++ +.|..+| .+++.+.........+.++...+++. +..++.++.+..+|... ......
T Consensus 185 d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g-~~~~~~--------- 250 (330)
T 3hxj_A 185 GKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG-TEKWRF--------- 250 (330)
T ss_dssp CTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS-CEEEEE---------
T ss_pred cCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC-CEeEEe---------
Confidence 7788877777 8899999 77877777666666788888887765 55566678888887533 222221
Q ss_pred CccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEc
Q psy10867 167 KGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 245 (343)
......+..+.+.+++ .|..++.+|.+..+|. +++.+..+.. ...+.++...+++. |++++
T Consensus 251 -------------~~~~~~~~~~~~~~~g---~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt 312 (330)
T 3hxj_A 251 -------------KTGKRIESSPVIGNTD---TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGT 312 (330)
T ss_dssp -------------ECSSCCCSCCEECTTS---CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEEC
T ss_pred -------------eCCCCccccceEcCCC---eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEc
Confidence 1122223334455454 5777888889999995 7777776664 34466777777765 66788
Q ss_pred CCCcEEEEEeec
Q psy10867 246 SEGVIKSFCLRQ 257 (343)
Q Consensus 246 ~d~~i~i~d~~~ 257 (343)
.+|.+++.....
T Consensus 313 ~~G~~~~~~~~~ 324 (330)
T 3hxj_A 313 RNGKFYALFNLE 324 (330)
T ss_dssp TTSCEEEEEC--
T ss_pred CCCeEEEEeccc
Confidence 999999887654
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.39 E-value=5e-10 Score=97.57 Aligned_cols=305 Identities=11% Similarity=0.023 Sum_probs=178.3
Q ss_pred ceEEEecCC-CCeEEEEec-CCceEEEEEecCCCC----------cceEEEEeC-Cce---EEEEEcCCCeEEEEeCCCc
Q psy10867 5 NEVAFSYDG-SGAISVWEP-KGGTLLMSYKGASVL----------SPHSMCLLG-NDY---VLGVEKGKPMIQAWPVNSQ 68 (343)
Q Consensus 5 ~~~~~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~----------~v~~~~~~~-~~~---~~~~~~~~~~i~iw~~~~~ 68 (343)
...+|..+. ++.|.-+|. .+|+.+.+++..... ....++++| ++. .+..+..++.+.-+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455677777 889999999 899999888764321 113456654 333 1444555599999999999
Q ss_pred ccceecccCC----cceEE-EEECCCCCEEEEe------cCCeEEEEEccCCceEEEecccCCC----------------
Q psy10867 69 EKAQLRLICP----GRISS-MQASPDAAYIAVS------IETKLHMWQISSGRLLATASSHYQP---------------- 121 (343)
Q Consensus 69 ~~~~~~~~~~----~~v~~-~~~s~~~~~l~~~------~d~~i~v~~~~~~~~~~~~~~~~~~---------------- 121 (343)
+.+....... ..+.+ ... .++.+++.+ .++.|+.+|.++|+.+-.+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 8773322111 01111 011 155555543 2789999999999988766432110
Q ss_pred ---------------------e-EEEEEecCCCEEEEecCC----------------CeEEEeecCccceeeeeecCCCC
Q psy10867 122 ---------------------I-TIVKWSADSNFIVTGGED----------------GTICVWQLSRLICKQTVAFGIPG 163 (343)
Q Consensus 122 ---------------------v-~~~~~~~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~ 163 (343)
+ ..+++.++...++.+..+ +.|..+|.++++....++.....
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 0 134566677777777654 37999999998877665421000
Q ss_pred CCCCccccccceeeeecccccceEEEEee-cCCCc-eEEEEeeCCCeEEEEecCCCceEEEeecCC--------------
Q psy10867 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLS-KLGAK-SRVASVSHDRTCKIFDLCTGEDLLSLILDT-------------- 227 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------------- 227 (343)
. ..+.....++. +... .+++. ..++.++.+|.++++|.++++.+.......
T Consensus 301 ~------------wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~ 367 (599)
T 1w6s_A 301 E------------WDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQ 367 (599)
T ss_dssp S------------SCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCC
T ss_pred c------------ccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCc
Confidence 0 00001111221 2221 23311 356778899999999999999987765221
Q ss_pred cE--------------------------EEEEEcCCCCEEEEEcCC----------------------------------
Q psy10867 228 RL--------------------------TCVAFDGTEDNIYMGTSE---------------------------------- 247 (343)
Q Consensus 228 ~i--------------------------~~~~~~~~~~~l~~~~~d---------------------------------- 247 (343)
++ ..++++|+..++++...+
T Consensus 368 p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~ 447 (599)
T 1w6s_A 368 PVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQ 447 (599)
T ss_dssp EEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTT
T ss_pred eeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcc
Confidence 11 246778887777665322
Q ss_pred -----CcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCc
Q psy10867 248 -----GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGP 322 (343)
Q Consensus 248 -----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 322 (343)
|.|..||+.+.+...... +..+...-.+...+.+++.++.|+.|+.||.++|+.+.+++....
T Consensus 448 ~~~~~G~l~A~D~~tG~~~W~~~------------~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 448 NYEGLGQIKAYNAITGDYKWEKM------------ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp TTBCCEEEEEECTTTCCEEEEEE------------ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCCCcCeEEEEECCCCCEEeEec------------CCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 344444444433222111 000111111122466778899999999999999999999872222
Q ss_pred --eEEEEEccCCCee
Q psy10867 323 --VLGAFLGLLPPAI 335 (343)
Q Consensus 323 --v~~~~~sp~~~~l 335 (343)
..-+.+..+|+..
T Consensus 516 ~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 516 AIGYPMTYTHKGTQY 530 (599)
T ss_dssp CCSCCEEEEETTEEE
T ss_pred cEeccEEEEeCCEEE
Confidence 2235666777643
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.38 E-value=5.2e-08 Score=88.93 Aligned_cols=289 Identities=9% Similarity=-0.004 Sum_probs=184.8
Q ss_pred eEEEEecCCceEEEEEec-------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc------cCCcceE
Q psy10867 16 AISVWEPKGGTLLMSYKG-------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------ICPGRIS 82 (343)
Q Consensus 16 ~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------~~~~~v~ 82 (343)
-|.+||..+++....... ... .|.++...++|.+-++... +-|..|+..+........ -....|.
T Consensus 283 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~D~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~ 360 (795)
T 4a2l_A 283 DLNIYHEGTDSFASYSSNPVENGSLSQR-SVRSIFMDSQGGMWLGTYF-GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVS 360 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTSTTSCSSS-CEEEEEECTTSCEEEEESS-SCEEEECGGGGSSEEECCCTTSSSCSCSSEE
T ss_pred hhheEcCCCCeEEEEecCCCCCCCCCCC-cEEEEEEeCCcCEEEEECC-CCeEEeCCCcccceEEcCCCCCCCCCCCeeE
Confidence 477888877664433211 123 7899999999988877765 668888876654332211 1235699
Q ss_pred EEEECCCCCEEEEecCCeEEEEEccCCceEEEecc--------cCCCeEEEEEecCCCEEEEecCCCeEEEeecCcccee
Q psy10867 83 SMQASPDAAYIAVSIETKLHMWQISSGRLLATASS--------HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICK 154 (343)
Q Consensus 83 ~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 154 (343)
++...++|.+.+++.++.|..|+..+++....... ....|.++...++++.|..|+.++-|..+|..++...
T Consensus 361 ~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 361 CIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE 440 (795)
T ss_dssp EEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE
Confidence 99999999988888887899999887765433211 2357899998888875667777778999998876432
Q ss_pred eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-------cCC
Q psy10867 155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-------LDT 227 (343)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------~~~ 227 (343)
.... . ........|.++...+++ .+. .|+. +-+.+||..+++...... ...
T Consensus 441 ~~~~----------------~--~~~l~~~~v~~i~~d~~g--~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 441 NFNQ----------------R--NSQLVNENVYAILPDGEG--NLW-LGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp EECT----------------T--TSCCSCSCEEEEEECSSS--CEE-EEES-SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred Eeec----------------C--CCCcCCCeeEEEEECCCC--CEE-EEec-CceeEEeCCCCeEEEccccccccccCCc
Confidence 2100 0 000134578888888877 444 4444 458889987765432211 125
Q ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
.|.++...+++...+.. . +-+..||..+... .+.. .. .........|.++...++|++.++. .. -|..||
T Consensus 499 ~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~--~~--~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d 568 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKAS--IL--PVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFN 568 (795)
T ss_dssp CEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECC--CS--CSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEE
T ss_pred eEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEec--CC--CCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeEC
Confidence 68999999988766554 4 5588888765432 1100 00 0011235679999999988865544 34 588899
Q ss_pred cccceeeeecc----cCCceEEEEEccCCCeeeec
Q psy10867 308 TISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 308 ~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~ 338 (343)
..+++....-. ....|.++...++|+..+++
T Consensus 569 ~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 569 EKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp TTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred CCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence 87665433211 34568888888888876654
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.37 E-value=2.3e-09 Score=81.77 Aligned_cols=196 Identities=11% Similarity=0.056 Sum_probs=132.4
Q ss_pred eEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEE
Q psy10867 26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQ 105 (343)
Q Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~ 105 (343)
+.+.++......-...+.|+. +.+..+...+|.|+.+|+++++.+.........-..+++..+.-+.++-.++.+.+||
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 456666544431347889985 5666666666899999999999886552211112345555333333345689999999
Q ss_pred ccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867 106 ISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185 (343)
Q Consensus 106 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
.++.+.+.++..... -..++ ++++.|+.+..++.|.++|..+.+....+.. ..-...-..
T Consensus 123 ~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V-----------------~~~g~~v~~ 182 (268)
T 3nok_A 123 GMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV-----------------KLRGQPVEL 182 (268)
T ss_dssp TTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC-----------------EETTEECCC
T ss_pred CCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe-----------------CCCCccccc
Confidence 999999988874322 23444 5678777777789999999999877665531 110111224
Q ss_pred eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--------------CcEEEEEEcCCCCEEEEEc
Q psy10867 186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TRLTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~ 245 (343)
++.+.|. ++ .+++....++.|.+.|.++++.+..+... ...+.|+++|+++.|++.+
T Consensus 183 lNeLe~~-dG--~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 183 INELECA-NG--VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEEE-TT--EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccEEe-CC--EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5667776 55 66666667889999999999998887632 3578999999877666654
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.36 E-value=1.7e-10 Score=89.11 Aligned_cols=196 Identities=10% Similarity=0.004 Sum_probs=132.8
Q ss_pred ceEEEecccCC--CeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867 110 RLLATASSHYQ--PITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185 (343)
Q Consensus 110 ~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
+.+.++. |.. ....+.|+|++.++++.+. ++.|.+.|+.+++....+.. .. ...
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--------------------~~-~~f 67 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--------------------DD-SYF 67 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--------------------CT-TCC
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--------------------CC-Ccc
Confidence 3445553 443 3589999998765555543 57999999999877665431 11 112
Q ss_pred eEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867 186 VTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 186 v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 264 (343)
...+++. +. .+.++.-.++.+.++|..+.+.+.++... .. ...++++++.++++..++.|.++|..+.+.....
T Consensus 68 geGi~~~--g~-~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 68 GEGLTLL--NE-KLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp EEEEEEE--TT-EEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred eEEEEEe--CC-EEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 2345554 32 56666667899999999999999988755 22 2445668888888878899999998876554432
Q ss_pred cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--------------CceEEEEEcc
Q psy10867 265 HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--------------GPVLGAFLGL 330 (343)
Q Consensus 265 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp 330 (343)
... .-...-..++.+.|. ++...+....++.|.+-|..+++.+..+... .....++|+|
T Consensus 143 ~Vg------~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~ 215 (266)
T 2iwa_A 143 NVK------YNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ 215 (266)
T ss_dssp ECE------ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET
T ss_pred EEC------CCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC
Confidence 210 000011246778887 7766666656789999999999998888621 3568999999
Q ss_pred CCCeeeecc
Q psy10867 331 LPPAIHDYD 339 (343)
Q Consensus 331 ~~~~l~~~~ 339 (343)
+++.|++++
T Consensus 216 ~~~~lfVTg 224 (266)
T 2iwa_A 216 ENKRIFVTG 224 (266)
T ss_dssp TTTEEEEEE
T ss_pred CCCEEEEEC
Confidence 998776654
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.36 E-value=4.6e-10 Score=97.91 Aligned_cols=304 Identities=12% Similarity=0.047 Sum_probs=174.3
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCCCcc--------eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccC
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSP--------HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC 77 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~ 77 (343)
..+|.++.++.|.-+|..+|+.+.++........ ..+++. ++++++.. .++.|.-+|..+++.+......
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~-~~~v~~~t-~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY-GDKVFFGT-LDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE-TTEEEEEE-TTTEEEEEESSSCCEEEEEECS
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE-CCEEEEEe-CCCEEEEEECCCCCEEeeecCC
Confidence 3455555544599999999999998876542110 223332 45555544 4589999999999877333211
Q ss_pred Cc----ceE-EEEECC---CCC-EEEEe-------cCCeEEEEEccCCceEEEecccCCCe-------------------
Q psy10867 78 PG----RIS-SMQASP---DAA-YIAVS-------IETKLHMWQISSGRLLATASSHYQPI------------------- 122 (343)
Q Consensus 78 ~~----~v~-~~~~s~---~~~-~l~~~-------~d~~i~v~~~~~~~~~~~~~~~~~~v------------------- 122 (343)
.. .+. ...... +++ .++++ .++.|+-+|..+|+.+-........+
T Consensus 147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w 226 (582)
T 1flg_A 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSW 226 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccC
Confidence 10 111 001111 232 44442 26899999999998876543211000
Q ss_pred ----------------------EEEEEecCCCEEEEecC--------------------C----CeEEEeecCccceeee
Q psy10867 123 ----------------------TIVKWSADSNFIVTGGE--------------------D----GTICVWQLSRLICKQT 156 (343)
Q Consensus 123 ----------------------~~~~~~~~~~~l~s~~~--------------------d----g~i~iwd~~~~~~~~~ 156 (343)
..+++.|+...++.+.. | +.|..+|..+++....
T Consensus 227 ~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~ 306 (582)
T 1flg_A 227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF 306 (582)
T ss_dssp CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred CCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEE
Confidence 12456666666766552 2 5899999999887776
Q ss_pred eecCCCCCCCCccccccceeeeecccccceEEEEee-cCCCc-eEEEEeeCCCeEEEEecCCCceEEEeecCCc------
Q psy10867 157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS-KLGAK-SRVASVSHDRTCKIFDLCTGEDLLSLILDTR------ 228 (343)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------ 228 (343)
++...... ..+.....++. +... .+++. ..++.++.+|.++++|.++++.+..+.....
T Consensus 307 ~q~~~~d~------------wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 373 (582)
T 1flg_A 307 YQHTPNDA------------WDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASH 373 (582)
T ss_dssp EESSTTCC------------SCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEE
T ss_pred EeCCCCCc------------ccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcccccc
Confidence 54210000 00001111221 1221 34411 2678889999999999999999877653220
Q ss_pred --------E--------------------------------EEEEEcCCCCEEEEEcC----------------------
Q psy10867 229 --------L--------------------------------TCVAFDGTEDNIYMGTS---------------------- 246 (343)
Q Consensus 229 --------i--------------------------------~~~~~~~~~~~l~~~~~---------------------- 246 (343)
+ ..++++|+...+++...
T Consensus 374 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 453 (582)
T 1flg_A 374 IDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGM 453 (582)
T ss_dssp ECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceecc
Confidence 0 13466676666665432
Q ss_pred -----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeee
Q psy10867 247 -----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLR 315 (343)
Q Consensus 247 -----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 315 (343)
+|.|..||+.+.+....... ..++..-.....+.+++.++.||.++.||.++|+.+.
T Consensus 454 ~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~------------~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW 521 (582)
T 1flg_A 454 GFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE------------HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELW 521 (582)
T ss_dssp EEEEEESCSSCSEEEEEECTTTCCEEEEEEE------------SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceeecCCCCCCcceEEEEECCCCCEEEEecC------------CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEE
Confidence 45666677666544332210 0111111112245678889999999999999999999
Q ss_pred ecccCCceE--EEEEccCCCeee
Q psy10867 316 TIQHKGPVL--GAFLGLLPPAIH 336 (343)
Q Consensus 316 ~~~~~~~v~--~~~~sp~~~~l~ 336 (343)
+++....+. -+.|..+|+..+
T Consensus 522 ~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 522 KFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp EEECSSCCCSCCEEEEETTEEEE
T ss_pred EecCCCCcccCceEEEECCEEEE
Confidence 998444443 366777887444
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.36 E-value=1.8e-09 Score=82.43 Aligned_cols=193 Identities=12% Similarity=0.085 Sum_probs=131.4
Q ss_pred eEEEEEecCCCCcceEEEEeCCceEEEEEcCCC--eEEEEeCCCcccceecccCCcceE--EEEECCCCCEEEE--ecCC
Q psy10867 26 TLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP--MIQAWPVNSQEKAQLRLICPGRIS--SMQASPDAAYIAV--SIET 99 (343)
Q Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~iw~~~~~~~~~~~~~~~~~v~--~~~~s~~~~~l~~--~~d~ 99 (343)
+.++++......-...+.|+ ++.+..+.+.+| .|+.+|+++++.+...... .... .+++ ++..|.. -.++
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~--~g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISD--WKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEE--ETTEEEEEESSSS
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEE--eCCEEEEEEeeCC
Confidence 45666754443234789998 566666655545 8999999999987655432 2332 3444 3444443 4688
Q ss_pred eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
.+.+||.++.+.+.++..... ...++++++.|+.+..++.|.++|..+.+....+.. . .
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V-----------------~-~ 166 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV-----------------T-A 166 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC-----------------E-E
T ss_pred EEEEEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe-----------------c-c
Confidence 999999999999988874322 223345777777776678899999999877665431 1 1
Q ss_pred cccc-cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC-------------CcEEEEEEcCCCCEEEEEc
Q psy10867 180 SQHS-LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD-------------TRLTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 180 ~~~~-~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~l~~~~ 245 (343)
.+.. ..++.+.+. ++ .+.+..-.++.|.+.|.++++.+..+... ...+.++|+|+++.|++.+
T Consensus 167 ~g~~~~~lNELe~~-~G--~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 167 HGEELPELNELEWV-DG--EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTEECCCEEEEEEE-TT--EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCccccccceeEEE-CC--EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1111 335567776 56 66666667889999999999998888742 2468999999988887766
Q ss_pred C
Q psy10867 246 S 246 (343)
Q Consensus 246 ~ 246 (343)
.
T Consensus 244 K 244 (262)
T 3nol_A 244 K 244 (262)
T ss_dssp T
T ss_pred C
Confidence 4
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.32 E-value=4.5e-10 Score=85.71 Aligned_cols=193 Identities=9% Similarity=0.037 Sum_probs=129.4
Q ss_pred eEEEecccCCC--eEEEEEecCCCEEEEecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867 111 LLATASSHYQP--ITIVKWSADSNFIVTGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV 186 (343)
Q Consensus 111 ~~~~~~~~~~~--v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (343)
.+.++ .|... ...+.|+ ++.++.+.+.+| .|+.+|+.+++....+.+ . ....-
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--------------------~-~~~Fg 89 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--------------------G-KRYFG 89 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--------------------C-TTCCE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--------------------C-Cccce
Confidence 34555 34433 4789998 677777777766 899999999877665431 1 11111
Q ss_pred EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc
Q psy10867 187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI 266 (343)
Q Consensus 187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 266 (343)
..+++. ++ .+.+..-.++.+.+||..+.+.+.++.....-..++ ++++.|+.+..++.|.++|..+.+.......
T Consensus 90 eGit~~--g~-~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 90 EGISDW--KD-KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEEE--TT-EEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred eEEEEe--CC-EEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 224443 32 455556678999999999999999998654333343 5678888877788899999887665443321
Q ss_pred cCCCCCCcccccc-CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeeccc-------------CCceEEEEEccCC
Q psy10867 267 QDSTSNPDFIGHE-KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH-------------KGPVLGAFLGLLP 332 (343)
Q Consensus 267 ~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------~~~v~~~~~sp~~ 332 (343)
. ..+.. ..++.+.|. +|+..+..-.++.|.+.|..+|+.+..+.. ..-.+.++|+|++
T Consensus 165 ~-------~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 165 T-------AHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp E-------ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred c-------cCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 0 01111 335567776 777666665688999999999999888762 1345899999988
Q ss_pred Ceeeecc
Q psy10867 333 PAIHDYD 339 (343)
Q Consensus 333 ~~l~~~~ 339 (343)
+.|++.+
T Consensus 237 ~~lfVTG 243 (262)
T 3nol_A 237 HRLFVTG 243 (262)
T ss_dssp TEEEEEE
T ss_pred CEEEEEC
Confidence 7776543
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.28 E-value=7.9e-09 Score=83.71 Aligned_cols=238 Identities=8% Similarity=-0.049 Sum_probs=143.5
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-------------------cCCcceEEEEECC-CCCEEEEec
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-------------------ICPGRISSMQASP-DAAYIAVSI 97 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-------------------~~~~~v~~~~~s~-~~~~l~~~~ 97 (343)
...++++.+++.++.++..++.|..|+..+++...... .....+..+++.+ +++++++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 56789999999866666666899999887654332110 0113578899997 777777766
Q ss_pred CCeEEEEEccCCceEEEec---c-cCCCeEEEEEec-CCCEEEEecC-----------------CCeEEEeecCccceee
Q psy10867 98 ETKLHMWQISSGRLLATAS---S-HYQPITIVKWSA-DSNFIVTGGE-----------------DGTICVWQLSRLICKQ 155 (343)
Q Consensus 98 d~~i~v~~~~~~~~~~~~~---~-~~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~ 155 (343)
.+.|..+|..++....... + .......+++.+ +|+..++-.. ++.|..+|..++....
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 6668888876553322111 1 123467899999 8887666432 3678888876543211
Q ss_pred eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceE-EEEeeCCCeEEEEecCCCc--eEEEe-ecCCcEEE
Q psy10867 156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR-VASVSHDRTCKIFDLCTGE--DLLSL-ILDTRLTC 231 (343)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~--~~~~~-~~~~~i~~ 231 (343)
+.........++++|++ +. +++-+..+.|..|++.... ....+ .... ...
T Consensus 180 -----------------------~~~~~~~p~gia~~~dg--~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~g 233 (322)
T 2fp8_A 180 -----------------------LLKELHVPGGAEVSADS--SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGN 233 (322)
T ss_dssp -----------------------EEEEESCCCEEEECTTS--SEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEE
T ss_pred -----------------------eccCCccCcceEECCCC--CEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCC
Confidence 11112345679999998 54 4454667899999987521 11222 2333 788
Q ss_pred EEEcCCCCEEEEEcC----------CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867 232 VAFDGTEDNIYMGTS----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE 301 (343)
Q Consensus 232 ~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 301 (343)
++++++|++.++... .+.|..+|.. ......+....+. .-..++.+++ .+++++++...++
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~-------~~~~~~~~~~-~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF-------AGEHFEQIQE-HDGLLYIGTLFHG 304 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT-------TTSCCCEEEE-ETTEEEEECSSCS
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC-------ccccceEEEE-eCCEEEEeecCCC
Confidence 999999986665543 3567777653 2211111110000 0234566666 4666666666778
Q ss_pred cEEEEeccc
Q psy10867 302 TLKIWHTIS 310 (343)
Q Consensus 302 ~i~iwd~~~ 310 (343)
.|..+++..
T Consensus 305 ~i~~~~~~~ 313 (322)
T 2fp8_A 305 SVGILVYDK 313 (322)
T ss_dssp EEEEEEC--
T ss_pred ceEEEeccc
Confidence 898888753
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.28 E-value=4.6e-08 Score=78.54 Aligned_cols=249 Identities=7% Similarity=0.005 Sum_probs=148.1
Q ss_pred CceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEec--CC-e
Q psy10867 24 GGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSI--ET-K 100 (343)
Q Consensus 24 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--d~-~ 100 (343)
..+.+..+... . ....+++++++.++++...++.|..||..... .... ........+++.++|+++++.. ++ .
T Consensus 21 ~~~~~~~~p~~-~-~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 21 PAKIITSFPVN-T-FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHA-TVEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp CEEEEEEECTT-C-CEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEE-ECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred CceEeEeCCCC-C-CcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEE-eCCCCceeEEEcCCCcEEEEeccCCcce
Confidence 35566666554 3 67899999999988887677899999987643 2222 2345788999999999877742 22 5
Q ss_pred EEEEEccCCceEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 101 LHMWQISSGRLLATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 101 i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
|..++..+++....... .......++..+++..+++-..++.|..+|...+.......... . .. ...
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~-~----------~~-~~~ 164 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM-L----------AR-SNS 164 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG-G----------SC-SST
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCc-c----------cc-ccc
Confidence 77778777775433221 12233455555555555555568889888876532110000000 0 00 000
Q ss_pred cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-Cce--EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEee
Q psy10867 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GED--LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 256 (343)
.........+ ++++. .++++-+..+.|..+++.. ++. ...+........++++++|+++++....+.|.++|..
T Consensus 165 ~~~~~~pngi--s~dg~-~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 165 ESVFPAANGL--KRFGN-FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TCCSCSEEEE--EEETT-EEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred cCCCCcCCCc--CcCCC-EEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 0111234445 77763 4566666788999999874 321 1222222345678999999877776668899999864
Q ss_pred cccccccccccCCCCCCccccccCcEEEEEEc---cCCCEEEEEeCCC
Q psy10867 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS---ITGITLLSSSADE 301 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~dg 301 (343)
. .... +..+......+++++|. |+++.|+.++..+
T Consensus 242 G-~~~~---------~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 242 R-STTI---------IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp C-CEEE---------EECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred C-CEEE---------EeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 2 1100 00112223568899998 8877776655443
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.26 E-value=2.2e-09 Score=81.93 Aligned_cols=193 Identities=7% Similarity=-0.027 Sum_probs=130.0
Q ss_pred ceEEEecccCC--CeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867 110 RLLATASSHYQ--PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187 (343)
Q Consensus 110 ~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 187 (343)
+.+.++ .|.. ....+.|+ ++.++.+.+.+|.|+.+|+.+++....+ +.. ...-.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---------------------l~~-~~Fge 99 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---------------------RLG-NIFAE 99 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---------------------ECT-TCCEE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---------------------CCC-Cccee
Confidence 344455 3433 34788887 4677788888999999999998765432 111 11112
Q ss_pred EEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ 267 (343)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 267 (343)
.+++. ++ .+.+..-.++.+.+||..+.+.+.++.....-..++ ++++.|+.+..++.|.++|..+.+........
T Consensus 100 Git~~--g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~ 174 (268)
T 3nok_A 100 GLASD--GE-RLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVK 174 (268)
T ss_dssp EEEEC--SS-CEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEEe--CC-EEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeC
Confidence 34443 32 456666678999999999999999998655444444 56888888888999999998886654433211
Q ss_pred CCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccC--------------CceEEEEEccCCC
Q psy10867 268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK--------------GPVLGAFLGLLPP 333 (343)
Q Consensus 268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp~~~ 333 (343)
.-...-..++.+.|. +|+..+..-.+..|.+.|..+|+.+..+... .-.+.++|+|+++
T Consensus 175 ------~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 175 ------LRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp ------ETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred ------CCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 000011245667776 7766655556789999999999998887611 3568999999876
Q ss_pred eeeec
Q psy10867 334 AIHDY 338 (343)
Q Consensus 334 ~l~~~ 338 (343)
.|++.
T Consensus 248 rlfVT 252 (268)
T 3nok_A 248 RIFMT 252 (268)
T ss_dssp CEEEE
T ss_pred EEEEe
Confidence 66543
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.25 E-value=5.2e-08 Score=73.77 Aligned_cols=196 Identities=10% Similarity=0.053 Sum_probs=129.8
Q ss_pred ceEEEEEecCCCCcceEEEEeCCceEEEEEcCC--CeEEEEeCCCcccceecccCCc-ceEEEEECCCCCEEE--EecCC
Q psy10867 25 GTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK--PMIQAWPVNSQEKAQLRLICPG-RISSMQASPDAAYIA--VSIET 99 (343)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~iw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~--~~~d~ 99 (343)
-+.+.++......-...+.|++ +.+..+.... ..|+.+|+.+++.+........ .-..+++. +..|. +-.++
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred eEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 3566777544432566899987 5555555443 4899999999998765532221 11234443 33333 34689
Q ss_pred eEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee
Q psy10867 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179 (343)
Q Consensus 100 ~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
.+.+||.++.+.+.++...... ..++ ++++.|+.+..++.|.++|..+.+....+... .-
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~-----------------~~ 145 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT-----------------AG 145 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECE-----------------ET
T ss_pred EEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc-----------------cC
Confidence 9999999999999888743322 3444 56776776667889999999998776655311 10
Q ss_pred cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC--------------CcEEEEEEcCCCCEEEEEc
Q psy10867 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD--------------TRLTCVAFDGTEDNIYMGT 245 (343)
Q Consensus 180 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~ 245 (343)
...-..++.+.+. ++ .+++..-.+..|.+.|.++++.+..+... ...+.|+++|+++.|++.+
T Consensus 146 g~~~~~lNeLe~~-~G--~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 146 GRPLDNLNELEWV-NG--ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TEECCCEEEEEEE-TT--EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CcccccceeeEEe-CC--EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 0011344566655 55 56666656889999999999998887621 2468999999888777765
Q ss_pred C
Q psy10867 246 S 246 (343)
Q Consensus 246 ~ 246 (343)
.
T Consensus 223 K 223 (243)
T 3mbr_X 223 K 223 (243)
T ss_dssp T
T ss_pred C
Confidence 3
No 256
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.25 E-value=3.4e-07 Score=83.43 Aligned_cols=287 Identities=8% Similarity=-0.042 Sum_probs=176.8
Q ss_pred eEEEEecCCceEEEEEec-------CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-------------
Q psy10867 16 AISVWEPKGGTLLMSYKG-------ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL------------- 75 (343)
Q Consensus 16 ~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~------------- 75 (343)
-|.+||..+++...-... ... .|.++...++|.+.++... +-|.+++..+.+......
T Consensus 231 Gl~~~d~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 308 (781)
T 3v9f_A 231 GLALFNANTETFTNFHNNPGNIHGALSS-YIFSIKQLKDNKLWIATEL-NGIMILDLQQNQFLLPEQIRFEFIREGDNNY 308 (781)
T ss_dssp EEEEEETTTTEEEC-----------CCC-CEEEEEECTTSEEEEEESS-SCEEEEETTCC---------CEEECBCSSTT
T ss_pred cHheECCCCCcEEEEEcCCCccccccCc-eEEEEEECCCCCEEEEeCC-CCeEEECCCCCeeeeeeccccccccCCCCCC
Confidence 578888766654332111 123 7899999899988887764 458888887665432111
Q ss_pred -cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec---------ccCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867 76 -ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS---------SHYQPITIVKWSADSNFIVTGGEDGTICV 145 (343)
Q Consensus 76 -~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 145 (343)
.....|.++...++|.+-+++.++.|..++..++....... .....|.++...+++. |..|+.++-|..
T Consensus 309 ~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~ 387 (781)
T 3v9f_A 309 SLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINV 387 (781)
T ss_dssp SBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEE
T ss_pred CCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEE
Confidence 12456999999999998888878889999987655432211 1235688998887776 555665667888
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI- 224 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~- 224 (343)
+|..+....... .........|.++...+++ . |..|+.++-+..+|.++++.. .+.
T Consensus 388 ~~~~~~~~~~~~-------------------~~~~~~~~~v~~i~~d~~g--~-lWigt~~~Gl~~~~~~~~~~~-~~~~ 444 (781)
T 3v9f_A 388 FENGKRVAIYNK-------------------ENRELLSNSVLCSLKDSEG--N-LWFGTYLGNISYYNTRLKKFQ-IIEL 444 (781)
T ss_dssp EETTEEEEECC------------------------CCCSBEEEEEECTTS--C-EEEEETTEEEEEECSSSCEEE-ECCS
T ss_pred EECCCCeEEEcc-------------------CCCCCCCcceEEEEECCCC--C-EEEEeccCCEEEEcCCCCcEE-Eecc
Confidence 998764321100 0001234568888888776 3 555777777999998776543 332
Q ss_pred ---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCC
Q psy10867 225 ---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADE 301 (343)
Q Consensus 225 ---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 301 (343)
....|.++...+++.. .+|+. +-|..+|..+......... .........|.++...++|++.+. +.++
T Consensus 445 ~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~------~~~~~~~~~i~~i~~d~~g~lWig-t~~~ 515 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDT------SNSQLLENFVRSIAQDSEGRFWIG-TFGG 515 (781)
T ss_dssp TTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECT------TTSSCSCSCEEEEEECTTCCEEEE-ESSS
T ss_pred CCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccC------cccccccceeEEEEEcCCCCEEEE-EcCC
Confidence 2356899998887764 44555 5588888765322111000 000011467899999888875554 4434
Q ss_pred cEEEEecccceeeeecc----cCCceEEEEEccCCCeeee
Q psy10867 302 TLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 302 ~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~ 337 (343)
-|..||..+++...... ....|.++...++|...++
T Consensus 516 Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 516 GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 47788877655433211 3456889999888886654
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.22 E-value=8.3e-09 Score=91.81 Aligned_cols=256 Identities=13% Similarity=0.123 Sum_probs=156.6
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCC---CcceE-EEEeCCceEEEEEcC-----CCeEEEEeCCCcccceeccc
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPHS-MCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI 76 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~ 76 (343)
..+|.++.|+.|..+|..+|+.+.++..... ..+.+ ..+ .++.+++.... +|.|..+|..+++.+..+..
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 4567778899999999999999988876421 01111 111 15666655432 48999999999987743321
Q ss_pred ---CCc----------------------------ceEEEEECCCCCEEEEe-cCC-------------------eEEEEE
Q psy10867 77 ---CPG----------------------------RISSMQASPDAAYIAVS-IET-------------------KLHMWQ 105 (343)
Q Consensus 77 ---~~~----------------------------~v~~~~~s~~~~~l~~~-~d~-------------------~i~v~~ 105 (343)
... ....+++.|+..++..+ .++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 000 01236777776666653 333 499999
Q ss_pred ccCCceEEEecc--cC-------CCeEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCC-------CCC
Q psy10867 106 ISSGRLLATASS--HY-------QPITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPG-------SSG 166 (343)
Q Consensus 106 ~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~ 166 (343)
..+|+.+..++. |. .+.....+..+++ .++.++.+|.+.++|..+++.+....+.... ...
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 999999877753 22 2333333334665 6889999999999999999887554432200 000
Q ss_pred Ccccc-----ccceeeeeccccc--ceEEEEeecCCCceEEEE------------------------------------e
Q psy10867 167 KGVTG-----LTEPLHVKSQHSL--PVTHVTLSKLGAKSRVAS------------------------------------V 203 (343)
Q Consensus 167 ~~~~~-----~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~------------------------------------~ 203 (343)
..... ..+......+..+ .-..++++|+. .+++. .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~--g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT--GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT--TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCC--CEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 00000 0000000000000 01124555554 23222 1
Q ss_pred eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867 204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 204 ~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 264 (343)
..+|.|..||+.+++.+.+.....+.....+...+.++++++.|+.++.||.++.+....+
T Consensus 435 ~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp GCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 2348899999999999998886655554455567889999999999999999887665443
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.22 E-value=8.1e-08 Score=77.12 Aligned_cols=225 Identities=8% Similarity=0.024 Sum_probs=139.3
Q ss_pred cceEEEEECCCCCEEEEe-cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC--CeEEEeecCccceee
Q psy10867 79 GRISSMQASPDAAYIAVS-IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED--GTICVWQLSRLICKQ 155 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~-~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~ 155 (343)
.....++|+++++++++. .++.|..||... +....+. .......+++.++++++++.... ..|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 457789999999987775 678999999764 3333332 23468899999999966655332 246667766654321
Q ss_pred eeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-EEEe-------e---
Q psy10867 156 TVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-LLSL-------I--- 224 (343)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~-------~--- 224 (343)
.. .. ........++..+.+ ..+++-..++.|.++|..+++. +... .
T Consensus 110 ~~--------------------~~-~~~~~~~g~~~~~~~--~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 110 LL--------------------TL-PDAIFLNGITPLSDT--QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSES 166 (306)
T ss_dssp EE--------------------EC-TTCSCEEEEEESSSS--EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTC
T ss_pred EE--------------------eC-CCccccCcccccCCC--cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccC
Confidence 11 11 111223444545544 5555555688999999765431 1110 0
Q ss_pred cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcE
Q psy10867 225 LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETL 303 (343)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 303 (343)
.-.....+ +|+++.|+++ ...+.|..|++........ ...+. .......++++++|+++++....+.|
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~--------~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE--------PEIFV-EQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC--------CEEEE-ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc--------cEEEe-ccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 01124455 7888877665 4578999999874211100 01111 11345678999999988887778899
Q ss_pred EEEecccceee--eecc-cCCceEEEEEc---cCCCeeeeccc
Q psy10867 304 KIWHTISRQCL--RTIQ-HKGPVLGAFLG---LLPPAIHDYDF 340 (343)
Q Consensus 304 ~iwd~~~~~~~--~~~~-~~~~v~~~~~s---p~~~~l~~~~~ 340 (343)
.++|.. ++.. ..+. .....++++|. |+++.|+.++.
T Consensus 236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 999975 6553 2344 33668999999 89888877653
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.21 E-value=2e-07 Score=84.98 Aligned_cols=286 Identities=9% Similarity=-0.016 Sum_probs=174.5
Q ss_pred CeEEEEecCCceEEEEEe--------------cCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc-----
Q psy10867 15 GAISVWEPKGGTLLMSYK--------------GASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL----- 75 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~----- 75 (343)
+-|.++|..+++...... .... .|.++...++|.+-++... +-|..++..+........
T Consensus 278 ~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~-~v~~i~~D~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~~~ 355 (781)
T 3v9f_A 278 NGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNA-SARYIFQDSFNNIWIGTWG-GGINFISNAPPTFHTWSYSPTQM 355 (781)
T ss_dssp SCEEEEETTCC---------CEEECBCSSTTSBSSS-CEEEEEECSSCCEEEEEBS-SCEEEECSSCCSCEEEC----CC
T ss_pred CCeEEECCCCCeeeeeeccccccccCCCCCCCCCCC-eEEEEEEeCCCCEEEEecC-CeEEEeCCCCCcceeeccCcccc
Confidence 457778876654322111 1223 7889999998887777655 568888877654332211
Q ss_pred ----cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEe---cccCCCeEEEEEecCCCEEEEecCCCeEEEeec
Q psy10867 76 ----ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATA---SSHYQPITIVKWSADSNFIVTGGEDGTICVWQL 148 (343)
Q Consensus 76 ----~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 148 (343)
.....|.++...++|.+.+++.++.|..|+..++...... ......|.++...+++.+ ..|+.++-+..+|.
T Consensus 356 ~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~ 434 (781)
T 3v9f_A 356 NESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNT 434 (781)
T ss_dssp CSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECS
T ss_pred ccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcC
Confidence 1235699999988898888877777999997654332111 123457889988777764 44676677899988
Q ss_pred CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---
Q psy10867 149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--- 225 (343)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--- 225 (343)
.++...... ........|.++...+++ . |..|+. +-|..||..+++.......
T Consensus 435 ~~~~~~~~~--------------------~~~~~~~~v~~i~~d~~g--~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 435 RLKKFQIIE--------------------LEKNELLDVRVFYEDKNK--K-IWIGTH-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp SSCEEEECC--------------------STTTCCCCEEEEEECTTS--E-EEEEET-TEEEEEESSSSSCCEEECTTTS
T ss_pred CCCcEEEec--------------------cCCCCCCeEEEEEECCCC--C-EEEEEC-CceEEEeCCCCeEEecccCccc
Confidence 765321100 001234578888888777 4 444555 5688899877665433221
Q ss_pred ---CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCc
Q psy10867 226 ---DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADET 302 (343)
Q Consensus 226 ---~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 302 (343)
...+.++...++|...+ |+.++-+..||....... .+.. ... -....|.++...++|++.++. .+|.
T Consensus 491 ~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~-----~~~--l~~~~i~~i~~d~~g~lWi~T-~~Gl 560 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQ-----YEG--FCSNTINQIYRSSKGQMWLAT-GEGL 560 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECT-----TTT--CSCSCEEEEEECTTSCEEEEE-TTEE
T ss_pred ccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccC-----CCC--CCCCeeEEEEECCCCCEEEEE-CCCc
Confidence 35689999998887555 444344777776442211 1100 001 124578999998888755544 4665
Q ss_pred EEEEecccceeeeecc-----cCCceEEEEEccCCCeeeec
Q psy10867 303 LKIWHTISRQCLRTIQ-----HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 303 i~iwd~~~~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~ 338 (343)
|..||..+++.. .+. ....|.++...++|...+++
T Consensus 561 v~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 561 VCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp EEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred eEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEc
Confidence 588888766532 222 23467888888888776654
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.20 E-value=1.2e-08 Score=77.34 Aligned_cols=193 Identities=10% Similarity=0.033 Sum_probs=128.5
Q ss_pred eEEEecccC--CCeEEEEEecCCCEEEEecCCC--eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867 111 LLATASSHY--QPITIVKWSADSNFIVTGGEDG--TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV 186 (343)
Q Consensus 111 ~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (343)
.+.++ .|. .....+.|++ +.++.+.+.+| .|+.+|+.+++......++ . ...-
T Consensus 11 v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~--------------------~-~~fg 67 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP--------------------P-PYFG 67 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC--------------------T-TCCE
T ss_pred EEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC--------------------C-Ccce
Confidence 44555 354 3467899986 56666767654 8999999998776554311 1 1111
Q ss_pred EEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccc
Q psy10867 187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI 266 (343)
Q Consensus 187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 266 (343)
..+++. ++ .+....-.++.+.+||..+.+.+.++.....-..++ ++++.|+++..++.|.++|..+........+
T Consensus 68 eGi~~~--~~-~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 68 AGIVAW--RD-RLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEE--TT-EEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred eEEEEe--CC-EEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 233443 32 566666779999999999999999998655444454 5677888877799999999888665443321
Q ss_pred cCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-c-------------CCceEEEEEccCC
Q psy10867 267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-H-------------KGPVLGAFLGLLP 332 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-------------~~~v~~~~~sp~~ 332 (343)
. .-...-..++.+.+. +|+..+..-.+..|.+.|..+|+.+..+. . ..-.+.++++|++
T Consensus 143 ~------~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 143 T------AGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp E------ETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred c------cCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 1 000011245566665 67666555567799999999999988875 1 1246899999987
Q ss_pred Ceeeec
Q psy10867 333 PAIHDY 338 (343)
Q Consensus 333 ~~l~~~ 338 (343)
+.|++.
T Consensus 216 ~~lfVT 221 (243)
T 3mbr_X 216 DRLFVT 221 (243)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 776654
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.18 E-value=2.6e-08 Score=86.81 Aligned_cols=255 Identities=10% Similarity=0.019 Sum_probs=152.2
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCC---Ccce-EEEEeCCceEEEEEcC-----CCeEEEEeCCCcccceeccc
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPH-SMCLLGNDYVLGVEKG-----KPMIQAWPVNSQEKAQLRLI 76 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~-~~~~~~~~~~~~~~~~-----~~~i~iw~~~~~~~~~~~~~ 76 (343)
..+|.++.++.|..+|..+|+.+.+++.... ..+. +.... ++.+++.... ++.|..+|..+++.+..+..
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 4566777789999999999999988764331 0111 11122 5666666552 58999999999887633321
Q ss_pred CCcc-------------------------------------e-EEEEECCCCCEEEE-ec------------C----CeE
Q psy10867 77 CPGR-------------------------------------I-SSMQASPDAAYIAV-SI------------E----TKL 101 (343)
Q Consensus 77 ~~~~-------------------------------------v-~~~~~s~~~~~l~~-~~------------d----~~i 101 (343)
.... + ..+++.++...+.. .. + +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 1100 0 12455555444443 21 1 369
Q ss_pred EEEEccCCceEEEecc--cC--------CCeEEEEEecCCC---EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCc
Q psy10867 102 HMWQISSGRLLATASS--HY--------QPITIVKWSADSN---FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKG 168 (343)
Q Consensus 102 ~v~~~~~~~~~~~~~~--~~--------~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (343)
..+|..+|+.+-.++. |. .++. +...++|+ .++.++.+|.+.++|..+++.+....+.........
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 9999999998877653 21 2221 22234674 577889999999999999988877654321000000
Q ss_pred cc-cccceee--------------eeccccc--ceEEEEeecCCCceEEEEee---------------------------
Q psy10867 169 VT-GLTEPLH--------------VKSQHSL--PVTHVTLSKLGAKSRVASVS--------------------------- 204 (343)
Q Consensus 169 ~~-~~~~~~~--------------~~~~~~~--~v~~~~~~~~~~~~~l~~~~--------------------------- 204 (343)
.. ....++. ...+..+ .-..++++|+. .+++...
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~--g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES--RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT--TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC--CEEEEEchhccccccccccccccCCcccccccee
Confidence 00 0000100 0000000 01235666665 3443322
Q ss_pred ----------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867 205 ----------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 205 ----------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 264 (343)
.++.|..||..+++.+.++.....+....+...+..+++++.|+.|+.+|.++.+....+
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 358999999999999998876555444333445678888999999999999887765544
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.17 E-value=5.2e-08 Score=78.87 Aligned_cols=223 Identities=9% Similarity=-0.062 Sum_probs=136.1
Q ss_pred ceEEEEECCCCCEEEE-ecCCeEEEEEccCCceEEEecc--------------------cCCCeEEEEEec-CCCEEEEe
Q psy10867 80 RISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASS--------------------HYQPITIVKWSA-DSNFIVTG 137 (343)
Q Consensus 80 ~v~~~~~s~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~s~ 137 (343)
....+++.++++++.+ ..++.|..|+..+++... +.. ....+..+++.+ +++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 4567889999984554 577899999987654432 210 113578999997 565 4444
Q ss_pred cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeec-CCCceEEEEeeC----------
Q psy10867 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSK-LGAKSRVASVSH---------- 205 (343)
Q Consensus 138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~l~~~~~---------- 205 (343)
...+.+..+|..++.... +. .... ........+++.+ ++ .+.++-..
T Consensus 98 d~~~~i~~~d~~~g~~~~-~~------------------~~~~~~~~~~p~~i~~d~~~G--~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQ-LA------------------TSVDGVPFKWLYAVTVDQRTG--IVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp ETTTEEEEECTTCEECEE-EE------------------SEETTEECSCEEEEEECTTTC--CEEEEESCSSCCTTCHHH
T ss_pred ECCCCEEEEeCCCCEEEE-ec------------------ccCCCCcccccceEEEecCCC--EEEEECCcccccccccce
Confidence 444558888876542211 10 0001 1123467899999 88 55555322
Q ss_pred -------CCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCcccc
Q psy10867 206 -------DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG 277 (343)
Q Consensus 206 -------d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 277 (343)
++.|..||..+++.............++++|+++.|+++ ..++.|.+|++...... . ...+..
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-~--------~~~~~~ 227 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-T--------AEVLVK 227 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT-C--------EEEEEE
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC-c--------cceEEe
Confidence 377889998766543333323345679999999977766 55789999998752110 0 001111
Q ss_pred ccCcEEEEEEccCCCEEEEEeC----------CCcEEEEecccceeeeecc-c----CCceEEEEEccCCCeeee
Q psy10867 278 HEKQVTSLSCSITGITLLSSSA----------DETLKIWHTISRQCLRTIQ-H----KGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 278 ~~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~-~----~~~v~~~~~sp~~~~l~~ 337 (343)
..+ ...++++++|++.++... .+.|..+|. .++.+..+. . ...++.+++ .+++..++
T Consensus 228 ~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~ 299 (322)
T 2fp8_A 228 IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIG 299 (322)
T ss_dssp CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEE
T ss_pred CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEe
Confidence 122 778999999987766544 467888886 577777665 2 234667766 34444433
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.14 E-value=7.6e-07 Score=72.74 Aligned_cols=242 Identities=8% Similarity=-0.063 Sum_probs=151.9
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEe
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATA 115 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~ 115 (343)
...|.+..++..++++.. ..|+..++......... .....+..++|.+.+..|. + ...+.|+.+++..+.....+
T Consensus 35 ~~~C~~~~~~~~ll~~~~--~~I~~i~~~g~~~~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 35 RRSCKALGPEPVLLFANR--IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp SSCEEESSSCCEEEEECB--SCEEEECTTSCCEEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCcccccccCceeEeecc--cceEEEeCCCCeeEEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 446666666555555543 46888888765544333 3345678999997655554 5 35679999998876544444
Q ss_pred cccCCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecC
Q psy10867 116 SSHYQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194 (343)
Q Consensus 116 ~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (343)
.........+++.+. +++.++-...+.|.+.++..... .............++++|.
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----------------------~~l~~~~l~~P~~iavdp~ 169 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----------------------KVLLWQSLEKPRAIALHPM 169 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------------------EEEECTTCSCEEEEEEETT
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce----------------------EEEEeCCCCCcceEEEecC
Confidence 333344578999874 44555656678899998875421 1111223345789999986
Q ss_pred CCceEEEEeeCC-CeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCC
Q psy10867 195 GAKSRVASVSHD-RTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDST 270 (343)
Q Consensus 195 ~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~ 270 (343)
+. .++++-... +.|..+++... ....+. .-.....++++|++..|+.+. ..+.|..+|+.......
T Consensus 170 ~g-~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~-------- 239 (349)
T 3v64_C 170 EG-TIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA-------- 239 (349)
T ss_dssp TT-EEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--------
T ss_pred cC-eEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE--------
Confidence 53 555555555 78988887543 333332 234578999999887777664 46788888876422111
Q ss_pred CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
.+.........+++ ..+.++++-...+.|..++..+|+.+..+.
T Consensus 240 ---~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 240 ---VISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp ---EECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ---EEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 11112345677888 355566666677888888877777666655
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.13 E-value=5.1e-07 Score=74.83 Aligned_cols=251 Identities=8% Similarity=-0.080 Sum_probs=153.2
Q ss_pred eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecc
Q psy10867 40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASS 117 (343)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~ 117 (343)
.|.+..+.+.++++. . ..|+..++......... .....+..++|.+.+..|. + ...+.|+.+++..+.....+..
T Consensus 80 ~C~~~~~~~~l~~~~-~-~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 80 SCKALGPEPVLLFAN-R-IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp CEEECSSCCEEEEEC-B-SCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred eECCccccceeEeec-C-ccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 444544544444443 3 56888888776544433 3345688999997655444 5 3567999999887654444433
Q ss_pred cCCCeEEEEEecCC-CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867 118 HYQPITIVKWSADS-NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196 (343)
Q Consensus 118 ~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 196 (343)
.......+++.+.+ +++++-...+.|.+.++..... .............+++.|.+.
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~----------------------~~l~~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----------------------KVLLWQSLEKPRAIALHPMEG 214 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC----------------------EEEECSSCSCEEEEEEETTTT
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce----------------------EEeecCCCCCCcEEEEEcCCC
Confidence 33445678888754 4555556677888888865321 111122335678999998663
Q ss_pred ceEEEEeeCC-CeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCC
Q psy10867 197 KSRVASVSHD-RTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNP 273 (343)
Q Consensus 197 ~~~l~~~~~d-~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 273 (343)
.++++-... +.|..+++.......... .-.....++++|++..|+.+. ..+.|..+|+.......
T Consensus 215 -~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~----------- 282 (386)
T 3v65_B 215 -TIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA----------- 282 (386)
T ss_dssp -EEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEE-----------
T ss_pred -eEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEE-----------
Confidence 455554444 788888876433322222 234578999998877777664 46778888876422111
Q ss_pred ccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEE
Q psy10867 274 DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFL 328 (343)
Q Consensus 274 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~ 328 (343)
.+.........+++ ..+.++++-...+.|..++..+|+.+..+. .......+++
T Consensus 283 ~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 283 VISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 11112345677888 445566676777889999877777766665 3233444443
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.07 E-value=9.1e-08 Score=85.25 Aligned_cols=273 Identities=10% Similarity=-0.017 Sum_probs=148.2
Q ss_pred eEEEEeC-CceEEEEEcCCC-----------eEEEEeCCCcccceecc---cCCcceEEEEECCCCCEEEEe--cCCeEE
Q psy10867 40 HSMCLLG-NDYVLGVEKGKP-----------MIQAWPVNSQEKAQLRL---ICPGRISSMQASPDAAYIAVS--IETKLH 102 (343)
Q Consensus 40 ~~~~~~~-~~~~~~~~~~~~-----------~i~iw~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~--~d~~i~ 102 (343)
.+.++.| ++++++.|+.+. .+.+||..+++...... .+.....++++.+++++++.| .+..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 4667777 888887765322 58899998876543221 222334457788899988874 345899
Q ss_pred EEEccCCceEEEecccCC-CeEEEEEecCCCEEEEec-CC-----CeEEEeecCccceeeeeecCCCCCCCCccccccce
Q psy10867 103 MWQISSGRLLATASSHYQ-PITIVKWSADSNFIVTGG-ED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP 175 (343)
Q Consensus 103 v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (343)
+||..+++-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+..-...-... ..+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~------------~~p 336 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK------------VNP 336 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC------------SGG
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcc------------ccc
Confidence 999988765433222222 123456667899999988 44 46899999875422110000 000
Q ss_pred eeeecccccceEEEEeecCCCceEEEEee---------CCCeEEEEecCCCceEEEeecC----------CcEEEEEEcC
Q psy10867 176 LHVKSQHSLPVTHVTLSKLGAKSRVASVS---------HDRTCKIFDLCTGEDLLSLILD----------TRLTCVAFDG 236 (343)
Q Consensus 176 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---------~d~~i~~wd~~~~~~~~~~~~~----------~~i~~~~~~~ 236 (343)
.... .+. ..+..++ ..++.++ ....+..||..+.......... ..-.++.|..
T Consensus 337 ~~~~-~~~-----~~~~~~~--~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~ 408 (656)
T 1k3i_A 337 MLTA-DKQ-----GLYRSDN--HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA 408 (656)
T ss_dssp GCCC-CTT-----GGGTTTC--SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET
T ss_pred cccc-ccc-----ceeecCC--ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccC
Confidence 0000 000 0011122 2333333 2346788888776543322211 1234455543
Q ss_pred -CCCEEEEEcCCC-----------cEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC----
Q psy10867 237 -TEDNIYMGTSEG-----------VIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD---- 300 (343)
Q Consensus 237 -~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---- 300 (343)
+++.+++|+.++ .|.+||..+..-... . ...+.. ...-.+++..|++++++.|+.+
T Consensus 409 ~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~----~~~mp~-~R~~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 409 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVF---A----SNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEE---C----TTCCSS-CCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEE---c----cCCCCC-CcccCCeEECCCCCEEEECCcccCcC
Confidence 677777777532 466666543211000 0 001111 1112234566899999999864
Q ss_pred -------CcEEEEecccceeee--ecc-cCCceEEEEEccCCCeeeeccc
Q psy10867 301 -------ETLKIWHTISRQCLR--TIQ-HKGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 301 -------g~i~iwd~~~~~~~~--~~~-~~~~v~~~~~sp~~~~l~~~~~ 340 (343)
..+.+||..+++-.. .+. .........+.|+++.++.++.
T Consensus 481 ~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 481 FEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999988765332 222 1222334567799999998874
No 266
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.05 E-value=2.4e-07 Score=80.87 Aligned_cols=253 Identities=9% Similarity=0.021 Sum_probs=147.7
Q ss_pred EEecCCCCeEEEEecCCceEEEEEecCCC---Ccce-EEEEeCCceEEEEEc-----CCCeEEEEeCCCcccceecccCC
Q psy10867 8 AFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPH-SMCLLGNDYVLGVEK-----GKPMIQAWPVNSQEKAQLRLICP 78 (343)
Q Consensus 8 ~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~-~~~~~~~~~~~~~~~-----~~~~i~iw~~~~~~~~~~~~~~~ 78 (343)
+|.++.|+.|..+|..+|+.+.+...... ..+. ...+. ++.+++.+. .++.|+-+|..+++.+..+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 67777899999999999999988765331 0111 11222 566666553 25899999999998763322111
Q ss_pred cc-------------------------------------e-EEEEECCCCCEEEE-ecC----------------CeEEE
Q psy10867 79 GR-------------------------------------I-SSMQASPDAAYIAV-SIE----------------TKLHM 103 (343)
Q Consensus 79 ~~-------------------------------------v-~~~~~s~~~~~l~~-~~d----------------~~i~v 103 (343)
.. + ..+++.++..++.. ..+ +.|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 00 0 12344455555554 222 48999
Q ss_pred EEccCCceEEEecccC----------CCeEEEEEe-cCC---CEEEEecCCCeEEEeecCccceeeeeecCCCC------
Q psy10867 104 WQISSGRLLATASSHY----------QPITIVKWS-ADS---NFIVTGGEDGTICVWQLSRLICKQTVAFGIPG------ 163 (343)
Q Consensus 104 ~~~~~~~~~~~~~~~~----------~~v~~~~~~-~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------ 163 (343)
+|.++|+.+-.++... .++. +... .+| +.++.++.+|.+.++|..+++.+....+....
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 9999999887765321 1221 2222 467 56777899999999999999888776543210
Q ss_pred --CCCCccc-------cccceeeeecccc--cceEEEEeecCCCceEEEE------------------------------
Q psy10867 164 --SSGKGVT-------GLTEPLHVKSQHS--LPVTHVTLSKLGAKSRVAS------------------------------ 202 (343)
Q Consensus 164 --~~~~~~~-------~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~------------------------------ 202 (343)
..+.... ...+......+.. ..-..++++|+. .+++.
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR--ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT--TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC--CEEEEeccccceeeecccccccCCcceecccceec
Confidence 0000000 0000000000000 001123344432 12211
Q ss_pred ---ee------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccc
Q psy10867 203 ---VS------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDH 264 (343)
Q Consensus 203 ---~~------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 264 (343)
.+ ..|.|..||+.+++.+.+.....+...-.+...+..++.++.|+.++.||.++.+.....
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 11 458999999999999988875443322223335778888999999999999998776554
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.01 E-value=3.2e-07 Score=80.14 Aligned_cols=256 Identities=13% Similarity=0.077 Sum_probs=147.9
Q ss_pred eEEEecCCCCeEEEEecCCceEEEEEecCCC---Ccce-EEEEeCC---ce-EEEEEc------CCCeEEEEeCCCcccc
Q psy10867 6 EVAFSYDGSGAISVWEPKGGTLLMSYKGASV---LSPH-SMCLLGN---DY-VLGVEK------GKPMIQAWPVNSQEKA 71 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~-~~~~~~~---~~-~~~~~~------~~~~i~iw~~~~~~~~ 71 (343)
..+|.++.++.|..+|..+|+.+.+++.... ..+. +..+..+ ++ .+..+. .++.|.-+|..+++.+
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 3466667789999999999999988765431 0111 1112222 21 344433 2589999999998876
Q ss_pred eecccCCcce-----------------------------------------EEEEECCCCCEEEE-ec------------
Q psy10867 72 QLRLICPGRI-----------------------------------------SSMQASPDAAYIAV-SI------------ 97 (343)
Q Consensus 72 ~~~~~~~~~v-----------------------------------------~~~~~s~~~~~l~~-~~------------ 97 (343)
-........+ ..+++.|+..++.. ..
T Consensus 198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~ 277 (582)
T 1flg_A 198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTA 277 (582)
T ss_dssp EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSC
T ss_pred eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccccc
Confidence 4322110000 12445555555553 21
Q ss_pred --------C----CeEEEEEccCCceEEEecc--cC--------CCeEEEEEe-cCCC---EEEEecCCCeEEEeecCcc
Q psy10867 98 --------E----TKLHMWQISSGRLLATASS--HY--------QPITIVKWS-ADSN---FIVTGGEDGTICVWQLSRL 151 (343)
Q Consensus 98 --------d----~~i~v~~~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~s~~~dg~i~iwd~~~~ 151 (343)
| +.|..+|..+|+.+-.++. |. .++. +... .+|+ .++.++.+|.++++|..++
T Consensus 278 ~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 278 KGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp TTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred CCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5899999999999877643 32 1221 2221 4664 7888999999999999999
Q ss_pred ceeeeeecCCCCC--------CCCcc-----c--------cccceeeeeccccc--ceEEEEeecCCCceEEEEe-----
Q psy10867 152 ICKQTVAFGIPGS--------SGKGV-----T--------GLTEPLHVKSQHSL--PVTHVTLSKLGAKSRVASV----- 203 (343)
Q Consensus 152 ~~~~~~~~~~~~~--------~~~~~-----~--------~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~----- 203 (343)
+.+.......... .+... . ...+.........+ .-..++++|+. .+++..
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~--g~~yv~~~~~~ 434 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDT--GLFYVPANHWK 434 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTT--CCEEEEEECEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCC--CEEEEechhcc
Confidence 8887766432100 00000 0 00000000000000 01134445443 222221
Q ss_pred ----------------------------eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 204 ----------------------------SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 204 ----------------------------~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
..+|.|..||+.+++.+.+.....+...-.....+.++++++.|+.++.||.
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 1368999999999999988875544332222334778888999999999999
Q ss_pred ecccccccc
Q psy10867 256 RQVPRTRDH 264 (343)
Q Consensus 256 ~~~~~~~~~ 264 (343)
++.+...++
T Consensus 515 ~tG~~lW~~ 523 (582)
T 1flg_A 515 KSGKELWKF 523 (582)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 987766544
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.00 E-value=1.8e-06 Score=66.38 Aligned_cols=208 Identities=11% Similarity=0.094 Sum_probs=134.5
Q ss_pred EEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEEEe-cCCeEEEEEc
Q psy10867 30 SYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIAVS-IETKLHMWQI 106 (343)
Q Consensus 30 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~d~~i~v~~~ 106 (343)
.+.+-.. .+..++++|+ +.++++...++.|...|.. ++.++... ........+++.+++.++++. .++.+.++++
T Consensus 21 ~l~g~~~-~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITN-NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCS-CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCccc-CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4556666 8999999986 5777777778899999988 66554432 323567889999999876764 4678999988
Q ss_pred cCCce---EEEec------ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceee
Q psy10867 107 SSGRL---LATAS------SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177 (343)
Q Consensus 107 ~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
..... +.... ..+.....++|.|.++.|+++.+.....+|.++.......+. ....+..
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~------------i~~~~~~ 166 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH------------ISKDKAL 166 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE------------EEECHHH
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee------------eecchhh
Confidence 65542 22221 134457899999998877777765555666654210000000 0000000
Q ss_pred eecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecC----------CcEEEEEEcCCCCEEEEEcCC
Q psy10867 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILD----------TRLTCVAFDGTEDNIYMGTSE 247 (343)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----------~~i~~~~~~~~~~~l~~~~~d 247 (343)
.-..+...+.+++++|... ++++.....+.+..+|. +++.+..+... .....++|.++|+. ++.+.-
T Consensus 167 ~~~~~~~d~S~l~~dp~tg-~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l-yIvsE~ 243 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKN-TLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI-YIVSEP 243 (255)
T ss_dssp HHTCCSSCCCEEEEETTTT-EEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE-EEEETT
T ss_pred ccccccCCceeEEEcCCCC-eEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCE-EEEcCC
Confidence 0011234578999999864 67777778899999995 46676666533 25789999999984 444666
Q ss_pred CcEEEEE
Q psy10867 248 GVIKSFC 254 (343)
Q Consensus 248 ~~i~i~d 254 (343)
+.++.|.
T Consensus 244 n~~y~f~ 250 (255)
T 3qqz_A 244 NRFYRFT 250 (255)
T ss_dssp TEEEEEE
T ss_pred ceEEEEE
Confidence 6666554
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.99 E-value=5.2e-06 Score=66.80 Aligned_cols=226 Identities=12% Similarity=-0.002 Sum_probs=138.8
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccC----CceEEEecccCCCeEEEEEecCC
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISS----GRLLATASSHYQPITIVKWSADS 131 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~----~~~~~~~~~~~~~v~~~~~~~~~ 131 (343)
..|+..++.+.+..... ........++|.+++..|. + ...+.|..+++.. ......+.........+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 46899999887655443 3345678999998665444 5 3568999999876 22222333222445789998744
Q ss_pred -CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-CeE
Q psy10867 132 -NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-RTC 209 (343)
Q Consensus 132 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-~~i 209 (343)
++.++-...+.|.+.++...... ............++++|.+. .++++.... +.|
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~----------------------~~~~~~~~~P~~iavdp~~g-~ly~~d~~~~~~I 145 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWTDWGTPAKI 145 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEE----------------------EEEECTTCCEEEEEEETTTT-EEEEEECSSSCEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceE----------------------EEEECCCCCcceEEeCCCCC-EEEEEccCCCCeE
Confidence 44555567789999998753211 11112334678999998652 444444333 788
Q ss_pred EEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEE
Q psy10867 210 KIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLS 286 (343)
Q Consensus 210 ~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 286 (343)
...++. ++....+. .-.....++++|++..|+.+. ..+.|..+|+...... . +............++
T Consensus 146 ~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~-~--------~~~~~~~~~~P~gia 215 (316)
T 1ijq_A 146 KKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-T--------ILEDEKRLAHPFSLA 215 (316)
T ss_dssp EEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-E--------EEECTTTTSSEEEEE
T ss_pred EEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE-E--------EeecCCccCCcEEEE
Confidence 888875 44433332 234578999999888777664 4678999998642211 1 000111123456788
Q ss_pred EccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 287 CSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 287 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
+. .+.++++-...+.|..++..+|+.+..+.
T Consensus 216 v~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 216 VF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 75 45666666677889999987777665554
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.98 E-value=8.4e-06 Score=67.86 Aligned_cols=243 Identities=10% Similarity=-0.052 Sum_probs=148.8
Q ss_pred EEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCC----ceEEEecccCCCeE
Q psy10867 50 VLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSG----RLLATASSHYQPIT 123 (343)
Q Consensus 50 ~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~ 123 (343)
++..+.. ..|+..++......... .....+..++|.+.+..|. + ...+.|+.+++... .....+........
T Consensus 85 ~ll~~~~-~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEET-TEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEecc-ceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 3444444 68999998876554433 4456788999998655444 4 35678999998652 23333333445678
Q ss_pred EEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE
Q psy10867 124 IVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS 202 (343)
Q Consensus 124 ~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 202 (343)
.+++.+ .+++.++-...+.|.+.++...... ............+++.|.+. .++++
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~----------------------~l~~~~~~~P~~iavdp~~g-~ly~t 219 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWT 219 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEE----------------------EEEECSSCCEEEEEEETTTT-EEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceE----------------------EEEeCCCCCcceEEEecccC-eEEEE
Confidence 899987 4555556666788999998764221 11122334578999998652 44444
Q ss_pred ee-CCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867 203 VS-HDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE 279 (343)
Q Consensus 203 ~~-~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (343)
-. ..+.|...++.......... .-.....+++++++..|+.+. ..+.|..+|+........ ......-
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~---------~~~~~~l 290 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI---------LEDEKRL 290 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE---------EECSSTT
T ss_pred eCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE---------EeCCCCC
Confidence 32 24788888876433332222 235688999999888887764 467899988765322111 0111122
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEE
Q psy10867 280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAF 327 (343)
Q Consensus 280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 327 (343)
.....+++. .+.++++-...+.|..+|..+|+.+..+. ......++.
T Consensus 291 ~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 291 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp SSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred CCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence 345677773 44566666777899999988887776665 333344543
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.90 E-value=1e-06 Score=74.02 Aligned_cols=245 Identities=8% Similarity=-0.021 Sum_probs=144.4
Q ss_pred cceEEEEeCC---ceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecC----C-eEEEEEccCC
Q psy10867 38 SPHSMCLLGN---DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIE----T-KLHMWQISSG 109 (343)
Q Consensus 38 ~v~~~~~~~~---~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d----~-~i~v~~~~~~ 109 (343)
.+..++++|+ +.++++-.. +.|+.++..+++..... ........++++++|+++++... . .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 5779999984 777777665 78999999877655433 34556899999999996666432 1 2444443322
Q ss_pred ce-EEEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceE
Q psy10867 110 RL-LATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187 (343)
Q Consensus 110 ~~-~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 187 (343)
.. ...+. .......++++| ++.++++-..++.|..+|..++.....+ .. .+......
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~-------------------~~-~~~~~~~~ 276 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE-------------------VM-MDTKGSNF 276 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE-------------------EE-CSCCSSCE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE-------------------ec-cCCCCCcc
Confidence 21 11121 223456788999 6766666667788999998765431111 00 01112234
Q ss_pred EEEeecCCCceEEEEeeCCCeEEEEecC--CCce--EEEeec----------------CCcEEEEEE---------cCCC
Q psy10867 188 HVTLSKLGAKSRVASVSHDRTCKIFDLC--TGED--LLSLIL----------------DTRLTCVAF---------DGTE 238 (343)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~--~~~~~~----------------~~~i~~~~~---------~~~~ 238 (343)
.++++|+++ .++++-...+.|+.++.. +++. ...+.. -.....+++ .+++
T Consensus 277 ~ia~dpdG~-~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g 355 (433)
T 4hw6_A 277 HIVWHPTGD-WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY 355 (433)
T ss_dssp EEEECTTSS-EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE
T ss_pred cEEEeCCCC-EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC
Confidence 699999983 255666667899998765 2321 111111 123677899 6777
Q ss_pred CEEEEEcCCCcEEEEEeecccccccccccCCC-CC-------CccccccCcEEEEEEc-cCCCEEEEEeCCCcEEEEecc
Q psy10867 239 DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST-SN-------PDFIGHEKQVTSLSCS-ITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 239 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~ 309 (343)
.+.++-..++.|+.++... . ..... .... .. ......-.....|+++ +++.++++-..++.|+.++++
T Consensus 356 ~lyvaD~~n~~I~~~~~~G-~-v~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 356 DFYFCDRDSHTVRVLTPEG-R-VTTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEETTTTEEEEECTTS-E-EEEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cEEEEECCCCEEEEECCCC-C-EEEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7776667778898887422 1 11100 0000 00 0000112347889999 677766666677788887764
No 272
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.90 E-value=1.6e-06 Score=69.25 Aligned_cols=202 Identities=15% Similarity=0.238 Sum_probs=127.3
Q ss_pred EEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecC----CC---EEEEec-C--CCeEEEeecC--ccceeeeeec
Q psy10867 92 YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD----SN---FIVTGG-E--DGTICVWQLS--RLICKQTVAF 159 (343)
Q Consensus 92 ~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~~-~--dg~i~iwd~~--~~~~~~~~~~ 159 (343)
+|++...+.+.+||+ +|+.++.+.. +.+..+..-|+ ++ ++++.. . +++|.+|++. +.. ...+.
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~- 117 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT- 117 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS-
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc-
Confidence 344567789999999 8998888864 56777777663 22 223333 3 5789999774 321 11110
Q ss_pred CCCCCCCCccccccceeeeecccccceEEEEe--ecCCCceEEEEeeCCCeEEEEecC-------CCceEEEeecCCcEE
Q psy10867 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL--SKLGAKSRVASVSHDRTCKIFDLC-------TGEDLLSLILDTRLT 230 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~~~d~~i~~wd~~-------~~~~~~~~~~~~~i~ 230 (343)
............+..+++ +|.....+++....+|.+..|++. +.+.++++...+.+.
T Consensus 118 --------------~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E 183 (355)
T 3amr_A 118 --------------DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTE 183 (355)
T ss_dssp --------------CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE
T ss_pred --------------ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcc
Confidence 000000011155677787 664422468888889999999883 446678888888999
Q ss_pred EEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcc--ccccCcEEEEEE--ccCCC-EEEEEe-CCCcEE
Q psy10867 231 CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDF--IGHEKQVTSLSC--SITGI-TLLSSS-ADETLK 304 (343)
Q Consensus 231 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~--s~~~~-~l~s~~-~dg~i~ 304 (343)
.+...+....|+++-.+.-|..++.+...... ...+..+ ..-...+..|++ .++++ +|++++ .+.++.
T Consensus 184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~------~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSN------GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSTTSCSC------CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred eEEEcCCCCeEEEecccceEEEEeCCcCCCCC------ceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 99999999999999998766666644322100 0001111 112235788887 45555 566555 677999
Q ss_pred EEecc-cceeeeecc
Q psy10867 305 IWHTI-SRQCLRTIQ 318 (343)
Q Consensus 305 iwd~~-~~~~~~~~~ 318 (343)
+||.. +.+.+..|.
T Consensus 258 Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 258 IYDRQGKNKYVADFR 272 (355)
T ss_dssp EEESSTTCCEEEEEE
T ss_pred EEECCCCCcEEEEEE
Confidence 99996 677777775
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=2.7e-06 Score=71.50 Aligned_cols=235 Identities=7% Similarity=-0.022 Sum_probs=134.5
Q ss_pred ceEEEEECC-C-CCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-CC----eEEEeecCccc
Q psy10867 80 RISSMQASP-D-AAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-DG----TICVWQLSRLI 152 (343)
Q Consensus 80 ~v~~~~~s~-~-~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~ 152 (343)
....++++| + +.++++...+.|+.+|+.++....... .......++|+++++.|+.+.. ++ .+...+. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 456889997 3 455555444889999987765444333 4456789999999996555543 22 2333333 221
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCeEEEEecCCCceEEEeec--CCcE
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRL 229 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~i 229 (343)
... ...+. .......++++| ++ .++++-..++.|..++...+........ ....
T Consensus 216 ~~~--------------------~~~l~-~~~~p~giavdp~~g--~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P 272 (430)
T 3tc9_A 216 FKV--------------------ITELT-KGQNCNGAETHPING--ELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWE 272 (430)
T ss_dssp SCS--------------------EEEEE-ECSSCCCEEECTTTC--CEEEEETTTTEEEEEETTTTEEEEEEECSSSSCC
T ss_pred eee--------------------eeeec-cCCCceEEEEeCCCC--EEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcc
Confidence 110 01111 123456788999 56 6666666788999999876654232222 2457
Q ss_pred EEEEEcCCCCEEEEE-cCCCcEEEEEeeccccc----ccccccCCCC-CCc---cccccCcEE-EEEEc--------cCC
Q psy10867 230 TCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRT----RDHHIQDSTS-NPD---FIGHEKQVT-SLSCS--------ITG 291 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~----~~~~~~~~~~-~~~---~~~~~~~v~-~~~~s--------~~~ 291 (343)
..++|+|++++|+++ ...+.|..++....... ..+.-..+.. ... ....-.... .++.. +++
T Consensus 273 ~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g 352 (430)
T 3tc9_A 273 FHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY 352 (430)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE
T ss_pred eeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC
Confidence 889999999966554 56788999887642110 0000000000 000 000111233 55553 346
Q ss_pred CEEEEEeCCCcEEEEecccceeeeeccc------------------CCceEEEEEccCCCeeeeccc
Q psy10867 292 ITLLSSSADETLKIWHTISRQCLRTIQH------------------KGPVLGAFLGLLPPAIHDYDF 340 (343)
Q Consensus 292 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------~~~v~~~~~sp~~~~l~~~~~ 340 (343)
.++++-...+.|+.++ .+|+....... -.....++++|++..|+.++.
T Consensus 353 ~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 353 DFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp EEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred eEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 6666666778899988 45654333211 125789999996566665543
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.87 E-value=2e-05 Score=65.31 Aligned_cols=217 Identities=6% Similarity=-0.096 Sum_probs=135.2
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCE-
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY- 92 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~- 92 (343)
..|+..++..++....+... . .+..++|.+ ++.++.+-...+.|..++.+.................+++.+.+..
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~-~-~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL-E-NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC-S-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred ccceeeccCCCcEEEEecCC-C-ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence 45777887665554444433 3 678999996 5677777767789999998876544333333334567888875544
Q ss_pred EEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec-CC-CeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867 93 IAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG-ED-GTICVWQLSRLICKQTVAFGIPGSSGKGV 169 (343)
Q Consensus 93 l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
+++ ...+.|.+.+++.......+.........+++.|.+..|+... .. +.|...++.....
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---------------- 237 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---------------- 237 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----------------
T ss_pred EEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc----------------
Confidence 444 4567899998875544444444445678999998666555444 33 6788887765321
Q ss_pred ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG 248 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~ 248 (343)
.......-.....++++|++. .+.++-+..+.|..+|+........+. .......+++. .+..+++-...+
T Consensus 238 ------~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~ 309 (386)
T 3v65_B 238 ------RIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTK 309 (386)
T ss_dssp ------EEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred ------EEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCC
Confidence 111112234578999997653 566666677899999986433322222 23456777773 344555555677
Q ss_pred cEEEEEeec
Q psy10867 249 VIKSFCLRQ 257 (343)
Q Consensus 249 ~i~i~d~~~ 257 (343)
.|..++..+
T Consensus 310 ~V~~~~~~~ 318 (386)
T 3v65_B 310 SINSANKFT 318 (386)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 888877443
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.87 E-value=1.9e-05 Score=64.50 Aligned_cols=217 Identities=6% Similarity=-0.091 Sum_probs=133.3
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC-E
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA-Y 92 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 92 (343)
..|+..++........+... . .+..++|++ ++.++.+-...+.|..++++.................+++.+.+. +
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~-~-~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL-E-NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC-S-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred cceEEEeCCCCeeEEeecCC-C-ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 34777777655444434333 3 678999996 566777766668999999887654443333334557888887554 4
Q ss_pred EEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCC-CeEEEeecCccceeeeeecCCCCCCCCcc
Q psy10867 93 IAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GED-GTICVWQLSRLICKQTVAFGIPGSSGKGV 169 (343)
Q Consensus 93 l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
+.+ ...+.|.+.+++.......+.........+++.|.+..|+.. ... +.|...++......
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--------------- 195 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--------------- 195 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---------------
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE---------------
Confidence 445 456799999987554443443344567899999865554444 344 67888887653111
Q ss_pred ccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCC
Q psy10867 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEG 248 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~ 248 (343)
......-.....++++|++. .+.++-+..+.|..+|+........+. .......+++. .+..+++-...+
T Consensus 196 -------~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~ 266 (349)
T 3v64_C 196 -------IIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTK 266 (349)
T ss_dssp -------ESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred -------EEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCC
Confidence 11112234578999998663 555666667899999986433322222 23456777773 344444555677
Q ss_pred cEEEEEeec
Q psy10867 249 VIKSFCLRQ 257 (343)
Q Consensus 249 ~i~i~d~~~ 257 (343)
.|..++..+
T Consensus 267 ~V~~~~~~~ 275 (349)
T 3v64_C 267 SINSANKFT 275 (349)
T ss_dssp EEEEEETTT
T ss_pred eEEEEEccC
Confidence 787777433
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.86 E-value=9.5e-07 Score=78.72 Aligned_cols=256 Identities=9% Similarity=-0.018 Sum_probs=139.0
Q ss_pred eEEEEecCCceE--EEEEecCCCCcceEEEEeCCceEEEEEc-CCCeEEEEeCCCcccceecccCCcc-eEEEEECCCCC
Q psy10867 16 AISVWEPKGGTL--LMSYKGASVLSPHSMCLLGNDYVLGVEK-GKPMIQAWPVNSQEKAQLRLICPGR-ISSMQASPDAA 91 (343)
Q Consensus 16 ~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~iw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~ 91 (343)
.+.+||..+++- +..+.........++++.+++++++.|+ .+..+.+||..+.+.......+..+ -.+++..++++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 578899887653 2333332221344577888888887776 4468999998876654332212222 23455667888
Q ss_pred EEEE-e-cC-----CeEEEEEccCCceEEEe----cccCCCeEEEEEecCCCEEEEecCCC---------eEEEeecCcc
Q psy10867 92 YIAV-S-IE-----TKLHMWQISSGRLLATA----SSHYQPITIVKWSADSNFIVTGGEDG---------TICVWQLSRL 151 (343)
Q Consensus 92 ~l~~-~-~d-----~~i~v~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg---------~i~iwd~~~~ 151 (343)
+++. | .+ ..+.+||..+++-...- ......-....+..+++.++.|+.+| .+..||..+.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 8887 4 23 46999999887644320 00000000011223455555554443 4667777664
Q ss_pred ceeeeeecCCCCCCCCccccccceeeee----cccccceEEEEeec-CCCceEEEEeeCCC-----------eEEEEecC
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVK----SQHSLPVTHVTLSK-LGAKSRVASVSHDR-----------TCKIFDLC 215 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~~~l~~~~~d~-----------~i~~wd~~ 215 (343)
....... .... ......-.++.+.. ++ ++++.|+.++ .+.+||..
T Consensus 380 ~w~~~~~-----------------~~~~~~~~~~~~~~~~av~~~~~~~--~i~v~GG~~~~~~~~~~~~~~~v~~yd~~ 440 (656)
T 1k3i_A 380 GDVKSAG-----------------KRQSNRGVAPDAMCGNAVMYDAVKG--KILTFGGSPDYQDSDATTNAHIITLGEPG 440 (656)
T ss_dssp CEEEEEE-----------------ECEETTEECCCCBTCEEEEEETTTT--EEEEECCBSSSSSSBCCCCEEEEECCSTT
T ss_pred ceeecCC-----------------ccccccccCCCCCCCceEeccCCCC--eEEEEeCCCCCCCCCcCCcceEEEcCCCC
Confidence 3221110 0000 00011223444433 44 7888887543 68888887
Q ss_pred CCceEEEe--e--cCCcEEEEEEcCCCCEEEEEcCC-----------CcEEEEEeecccccccccccCCCCCCccccccC
Q psy10867 216 TGEDLLSL--I--LDTRLTCVAFDGTEDNIYMGTSE-----------GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEK 280 (343)
Q Consensus 216 ~~~~~~~~--~--~~~~i~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (343)
+.+-.... . ....-.+++..|+++.+++|+.+ ..+.+||..+..-.. +..+.....
T Consensus 441 ~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~---------~~~~~~~R~ 511 (656)
T 1k3i_A 441 TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK---------QNPNSIVRV 511 (656)
T ss_dssp SCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE---------CCCCSSCCC
T ss_pred CCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee---------cCCCCCccc
Confidence 76654432 2 22223456677899999998754 468899986532110 111111122
Q ss_pred cEEEEEEccCCCEEEEEeC
Q psy10867 281 QVTSLSCSITGITLLSSSA 299 (343)
Q Consensus 281 ~v~~~~~s~~~~~l~s~~~ 299 (343)
......+.|++++++.|+.
T Consensus 512 ~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 512 YHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTEEEEECTTSCEEEEECC
T ss_pred cccHhhcCCCcEEEecCCC
Confidence 2234456789999999885
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=1.2e-05 Score=67.62 Aligned_cols=230 Identities=7% Similarity=-0.050 Sum_probs=125.8
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-EEEEEcCCC----eEEEEeCCCcccc--eecccCCcceEEEEEC
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-VLGVEKGKP----MIQAWPVNSQEKA--QLRLICPGRISSMQAS 87 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~----~i~iw~~~~~~~~--~~~~~~~~~v~~~~~s 87 (343)
+.|+.+|+.+++...... ... ....+++++++. ++++...++ .+..++. .+... ..+. .......++++
T Consensus 159 ~~I~~id~~~~~v~~~~~-~~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavd 234 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS-GLS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETH 234 (430)
T ss_dssp EEEEEEETTTTEEEEEEC-CCS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEEC
T ss_pred CcEEEEECCCCEEEEEec-CCC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEe
Confidence 677888876655443333 334 689999999987 555544222 2333333 33222 1221 22345678899
Q ss_pred C-CCCEEEEe-cCCeEEEEEccCCceEEEec-ccCCCeEEEEEecCCCE-EEEecCCCeEEEeecCcc--ce--eeeeec
Q psy10867 88 P-DAAYIAVS-IETKLHMWQISSGRLLATAS-SHYQPITIVKWSADSNF-IVTGGEDGTICVWQLSRL--IC--KQTVAF 159 (343)
Q Consensus 88 ~-~~~~l~~~-~d~~i~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~--~~--~~~~~~ 159 (343)
| ++.++++. .++.|..++..++....... ........++|+|++++ +++-...+.|..++.... .. ...+..
T Consensus 235 p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag 314 (430)
T 3tc9_A 235 PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCG 314 (430)
T ss_dssp TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEec
Confidence 9 67777764 56799999988665422222 12234678999999994 455556788999887642 11 111110
Q ss_pred CCCCCCCCccccccceeeeecccccceE-EEEeecC------CCceEEEEeeCCCeEEEEecCCCceEEEeec-------
Q psy10867 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLSKL------GAKSRVASVSHDRTCKIFDLCTGEDLLSLIL------- 225 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~------- 225 (343)
. .+..+.. . - ......-.... .+++.++ ..+.++++-...+.|+.++ .+++.......
T Consensus 315 ~-~g~~g~~-d----g-~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G 386 (430)
T 3tc9_A 315 Q-QGAKDWV-D----G-VGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSG 386 (430)
T ss_dssp C-TTCBCCB-C----E-EGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSS
T ss_pred c-CCCCCCC-C----C-CCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCc
Confidence 0 0000000 0 0 00000111233 4555431 1225666666678899888 45644333221
Q ss_pred --C---------CcEEEEEEcCC-CCEEEEEcCCCcEEEEEee
Q psy10867 226 --D---------TRLTCVAFDGT-EDNIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 226 --~---------~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~ 256 (343)
. .....++++|+ +.++++-..+..|+.++++
T Consensus 387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1 14789999995 5455555567788887754
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.83 E-value=9.9e-06 Score=62.26 Aligned_cols=212 Identities=10% Similarity=0.132 Sum_probs=127.5
Q ss_pred cccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccCCceEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867 74 RLICPGRISSMQASPDAAYIAV--SIETKLHMWQISSGRLLATASS-HYQPITIVKWSADSNFIVTGGEDGTICVWQLSR 150 (343)
Q Consensus 74 ~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 150 (343)
+.+-...+..++|.|++..|.+ ..++.|...|.. ++.+..+.- -....-.|++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 3355567999999998765554 456789999987 887777642 224678899998888777766778999998876
Q ss_pred cceeeeeecCCCCCCCCccccccceee-e--ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC---CCceEEEee
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEPLH-V--KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC---TGEDLLSLI 224 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~ 224 (343)
........ ... . ..........++++|.+ +.|+++.+.....+|.++ ....+....
T Consensus 101 ~~~i~~~~----------------~~~~~~~~~~~N~g~EGLA~d~~~--~~L~va~E~~p~~i~~~~g~~~~~~l~i~~ 162 (255)
T 3qqz_A 101 NSEVKILK----------------KIKIPLQESPTNCGFEGLAYSRQD--HTFWFFKEKNPIEVYKVNGLLSSNELHISK 162 (255)
T ss_dssp TCCEEEEE----------------EEECCCSSCCCSSCCEEEEEETTT--TEEEEEEESSSEEEEEEESTTCSSCCEEEE
T ss_pred CCeeeeee----------------eeccccccccccCCcceEEEeCCC--CEEEEEECcCCceEEEEcccccCCceeeec
Confidence 54321111 000 0 11234567899999988 455555554444555443 111122221
Q ss_pred --------cCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEE
Q psy10867 225 --------LDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295 (343)
Q Consensus 225 --------~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 295 (343)
.-..+..++++|... +++.+..+..+..+|.... ......+..+ ...+...-.....|+|.++|++.+
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g--~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKG--SRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTT--GGGCSSCCCSEEEEEECTTCCEEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCc--cCCcccccCCCCeeEECCCCCEEE
Confidence 123578999999755 4555666778888886643 2221111100 000101113567899999998555
Q ss_pred EEeCCCcEEEEec
Q psy10867 296 SSSADETLKIWHT 308 (343)
Q Consensus 296 s~~~dg~i~iwd~ 308 (343)
+ ++.+.++.+.-
T Consensus 240 v-sE~n~~y~f~~ 251 (255)
T 3qqz_A 240 V-SEPNRFYRFTP 251 (255)
T ss_dssp E-ETTTEEEEEEC
T ss_pred E-cCCceEEEEEe
Confidence 5 67776666653
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.82 E-value=1.9e-05 Score=63.40 Aligned_cols=225 Identities=11% Similarity=-0.015 Sum_probs=137.3
Q ss_pred CeEEEEeCCCccc-ceecccCCcceEEEEECCCCC-EEEE-ecCCeEEEEEccCCce-EEEecccCCCeEEEEEec-CCC
Q psy10867 58 PMIQAWPVNSQEK-AQLRLICPGRISSMQASPDAA-YIAV-SIETKLHMWQISSGRL-LATASSHYQPITIVKWSA-DSN 132 (343)
Q Consensus 58 ~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~-~l~~-~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~ 132 (343)
..|+..+++.... .............++|.+.+. ++.+ ...+.|+.+++..+.. ...+.........+++.+ .++
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ 92 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEK 92 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTE
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCe
Confidence 5799999887642 222222334577899998554 4445 3567999999876632 112222223466888987 445
Q ss_pred EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeEEE
Q psy10867 133 FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTCKI 211 (343)
Q Consensus 133 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~~ 211 (343)
++++-...+.|.++++...... ............+++.|.+. .++.+- +..+.|..
T Consensus 93 ly~~d~~~~~I~~~~~dG~~~~----------------------~l~~~~~~~P~giavdp~~g-~ly~td~~~~~~I~r 149 (318)
T 3sov_A 93 LYWTDSETNRIEVSNLDGSLRK----------------------VLFWQELDQPRAIALDPSSG-FMYWTDWGEVPKIER 149 (318)
T ss_dssp EEEEETTTTEEEEEETTSCSCE----------------------EEECSSCSSEEEEEEEGGGT-EEEEEECSSSCEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEE----------------------EEEeCCCCCccEEEEeCCCC-EEEEEecCCCCEEEE
Confidence 5556566788999998753211 11123345578999998652 444443 23578888
Q ss_pred EecCCCceEEEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEc
Q psy10867 212 FDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCS 288 (343)
Q Consensus 212 wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 288 (343)
.++.. .....+. .-.....++++|++..|+.+. ..+.|..+|+....... + ..+.......+++.
T Consensus 150 ~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~-~----------~~~~~~~P~glav~ 217 (318)
T 3sov_A 150 AGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA-V----------VKGSLPHPFALTLF 217 (318)
T ss_dssp EETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-E----------ECSCCSCEEEEEEE
T ss_pred EEcCC-CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEE-E----------ecCCCCCceEEEEe
Confidence 88753 3333332 234578999999877777664 56789999886422111 0 11123456677775
Q ss_pred cCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 289 ITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 289 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
. +.++++-...+.|..++..+|+....+.
T Consensus 218 ~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 218 E-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp T-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred C-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 3 4555566677889999987787665554
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.79 E-value=1.7e-05 Score=66.70 Aligned_cols=230 Identities=10% Similarity=-0.012 Sum_probs=126.9
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC---C-eEEEEeCCCcccceecccCCcceEEEEECC-C
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK---P-MIQAWPVNSQEKAQLRLICPGRISSMQASP-D 89 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~-~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~-~ 89 (343)
+.|+.+|..+++..... .... .+..+++++++.++++.... . .+...+...+...............+++.| +
T Consensus 162 ~~I~~id~~~g~v~~~~-~~~~-~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~ 239 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKT-TNIG-QCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQN 239 (433)
T ss_dssp SCEEEEETTTTEEEEEC-CCCS-CEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTT
T ss_pred CCEEEEECCCCEEEEee-cCCC-CccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCC
Confidence 56777777666554433 3333 68999999999866665421 1 233333222111001111223456788999 6
Q ss_pred CCEEEEe-cCCeEEEEEccCCceEEEe-c-ccCCCeEEEEEecCCCEE-EEecCCCeEEEeecCc--ccee--eeeecCC
Q psy10867 90 AAYIAVS-IETKLHMWQISSGRLLATA-S-SHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSR--LICK--QTVAFGI 161 (343)
Q Consensus 90 ~~~l~~~-~d~~i~v~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~--~~~~--~~~~~~~ 161 (343)
+.++++. .++.|+.++..++.....+ . +....-..++|+|+++.| ++-...+.|..++... +... ..+.. .
T Consensus 240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag-~ 318 (433)
T 4hw6_A 240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCG-Q 318 (433)
T ss_dssp CCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEE-C
T ss_pred CeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEe-c
Confidence 7776664 5678999998877662222 2 112223579999999844 4555678899987653 2111 11100 0
Q ss_pred CCCCCCccccccceeeeecccccceEEEEe---------ecCCCceEEEEeeCCCeEEEEecCCCceEEEeec-------
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTL---------SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL------- 225 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~------- 225 (343)
.+..+.. .. ......-.....+++ .+++ .++++-...+.|+.++. ++........
T Consensus 319 ~g~~g~~-dg-----~~~~a~~~~P~giav~~n~~y~~dd~~g--~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G 389 (433)
T 4hw6_A 319 HSSPGWV-DG-----MGTGARLWGPNQGIFVKNEAYAGEEDEY--DFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWG 389 (433)
T ss_dssp TTCCCCB-CE-----EGGGSBCSSEEEEEEEECGGGTTSSCCE--EEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSC
T ss_pred CCCCccC-CC-----cccceEEcCCccEEEEccccccccCCCC--cEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccc
Confidence 0000000 00 000111234667888 5555 67777777889999984 5543322211
Q ss_pred -----------CCcEEEEEEc-CCCCEEEEEcCCCcEEEEEee
Q psy10867 226 -----------DTRLTCVAFD-GTEDNIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 226 -----------~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~ 256 (343)
-.....++++ +++.++++-..++.|+.++++
T Consensus 390 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 390 YVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1236789999 555555555567788887764
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.79 E-value=3.2e-05 Score=62.20 Aligned_cols=223 Identities=7% Similarity=-0.097 Sum_probs=137.4
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC----cccceecccCCcce
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS----QEKAQLRLICPGRI 81 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~----~~~~~~~~~~~~~v 81 (343)
++|+.. ..|+..|+.+.+....+... . .+..++|++. +.++.+....+.|..+++.+ ..............
T Consensus 4 ll~~~~--~~I~~i~~~~~~~~~~~~~~-~-~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 4 LFFTNR--HEVRKMTLDRSEYTSLIPNL-R-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEECB--SSEEEEETTSCCCEEEECSC-S-SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEECC--CeEEEEECCCcceEehhcCC-C-ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 455554 45889999877665555443 3 6789999985 57777776678999999876 22222222222456
Q ss_pred EEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC-C-CeEEEeecCccceeeee
Q psy10867 82 SSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE-D-GTICVWQLSRLICKQTV 157 (343)
Q Consensus 82 ~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-g~i~iwd~~~~~~~~~~ 157 (343)
..+++.+.+ ++.++ ...+.|.+++++.......+.........+++.|.+..|+.+.. . +.|...++..... .
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~-- 156 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y-- 156 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-E--
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-E--
Confidence 788888644 44445 46789999998754443333333456789999986665554443 2 6788887754311 1
Q ss_pred ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-c---CCcEEEEE
Q psy10867 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-L---DTRLTCVA 233 (343)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~---~~~i~~~~ 233 (343)
......-.....+++++++. .++++-+..+.|..+|+... ....+. . ......++
T Consensus 157 -------------------~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~gia 215 (316)
T 1ijq_A 157 -------------------SLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLA 215 (316)
T ss_dssp -------------------EEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEE
T ss_pred -------------------EEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEE
Confidence 11112334678999998763 55556666789999998643 333332 1 23466777
Q ss_pred EcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867 234 FDGTEDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 234 ~~~~~~~l~~~~~d~~i~i~d~~~~ 258 (343)
+. .+..+++-...+.|..++..+.
T Consensus 216 v~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 216 VF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp EE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EE-CCEEEEEECCCCeEEEEeCCCC
Confidence 75 3445555556778888886543
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.77 E-value=2.1e-06 Score=77.72 Aligned_cols=193 Identities=12% Similarity=0.121 Sum_probs=107.3
Q ss_pred ceEEEEEC-CCCCEEEEe--cC----CeEEEEEccCC-ceEE-EecccCCCeEEEEEecCCCEEEEecCC-----CeEEE
Q psy10867 80 RISSMQAS-PDAAYIAVS--IE----TKLHMWQISSG-RLLA-TASSHYQPITIVKWSADSNFIVTGGED-----GTICV 145 (343)
Q Consensus 80 ~v~~~~~s-~~~~~l~~~--~d----~~i~v~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~i 145 (343)
.+...+|| |||++||-+ .+ ..|+++|+.++ +.+. .+. .....+.|+||++.|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 999988842 22 25999999988 6321 111 113468899999888776654 35777
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee---CCCeEEEEecCCCc-eE-
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS---HDRTCKIFDLCTGE-DL- 220 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~-~~- 220 (343)
+++.+...... .+.. .........+.|+|++ ++|+..+ ....|+++|+.++. ..
T Consensus 252 ~~lgt~~~~~~------------------lv~~-~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~l~~~d~~~~~~~~~ 310 (751)
T 2xe4_A 252 HVMGKLQSEDV------------------CLYE-EHNPLFSAFMYKAADT--NTLCIGSQSPETAEVHLLDLRKGNAHNT 310 (751)
T ss_dssp EETTSCGGGCE------------------EEEE-CCCTTCEEEEEECTTS--SEEEEEEECSSCEEEEEEESSSCTTCCC
T ss_pred EECCCCchhcE------------------EEEe-cCCCceEEEEEECCCC--CEEEEEecCCCCceEEEEECCCCCCCce
Confidence 78766432110 1111 1222345678999999 5665544 24568889988763 22
Q ss_pred -EEee--cCCcEEEEEEcCCCCEEEEEcCC--C--cEEEEEeecccccccccccCCCCCCc-cccccC--cEEEEEEccC
Q psy10867 221 -LSLI--LDTRLTCVAFDGTEDNIYMGTSE--G--VIKSFCLRQVPRTRDHHIQDSTSNPD-FIGHEK--QVTSLSCSIT 290 (343)
Q Consensus 221 -~~~~--~~~~i~~~~~~~~~~~l~~~~~d--~--~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~--~v~~~~~s~~ 290 (343)
..+. ......++.|+..+.+++....+ + .|..+|+..... ... +..+.. .+..+.+. .
T Consensus 311 ~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~-----------~~~~li~~~~~~~l~~~~~~-~ 378 (751)
T 2xe4_A 311 LEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSD-----------WSHVLVDHSEDVFMESIAVR-S 378 (751)
T ss_dssp EEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTC-----------CCCEEECCCSSEEEEEEEEC-S
T ss_pred eEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccc-----------ceeeEECCCCCcEEEEEEEE-C
Confidence 3332 23345555555433344444433 3 455555442111 112 222332 34455554 2
Q ss_pred CCEEEEEeCCCc--EEEEec
Q psy10867 291 GITLLSSSADET--LKIWHT 308 (343)
Q Consensus 291 ~~~l~s~~~dg~--i~iwd~ 308 (343)
+.++++...++. |+++++
T Consensus 379 ~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 379 NYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp SEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEEEeCCEEEEEEEec
Confidence 345567777775 455564
No 283
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.72 E-value=6e-05 Score=61.53 Aligned_cols=239 Identities=8% Similarity=-0.048 Sum_probs=127.2
Q ss_pred CcceEEEEECCCCCEEEEecCCeEEEEEccCCce--EEEec---ccCCCeEEEEEecC---CCEEEEecC-C-----CeE
Q psy10867 78 PGRISSMQASPDAAYIAVSIETKLHMWQISSGRL--LATAS---SHYQPITIVKWSAD---SNFIVTGGE-D-----GTI 143 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~s~~~-d-----g~i 143 (343)
-.....++|.|+|+++++...+.|++++ +++. +..+. ........|+++|+ +..|+.+.. . +.|
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3456799999999988887779999998 4432 22221 12356789999998 444444332 2 567
Q ss_pred EEeecCccceeeeeecCCCCCCCCccccccceeeeec---ccccceEEEEeecCCCceEEEEeeC-------------CC
Q psy10867 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS---QHSLPVTHVTLSKLGAKSRVASVSH-------------DR 207 (343)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~ 207 (343)
..++.......... ..+..+. ........++|.|++ .++++.+. .+
T Consensus 108 ~r~~~~~~~~~~~~----------------~l~~~~p~~~~~~h~~~~l~~~pdG--~Lyv~~G~~~~~~~~~d~~~~~g 169 (352)
T 2ism_A 108 VRLRHLGERGVLDR----------------VVLDGIPARPHGLHSGGRIAFGPDG--MLYVTTGEVYERELAQDLASLGG 169 (352)
T ss_dssp EEEEECSSCEEEEE----------------EEEEEECCCTTCCCCCCCEEECTTS--CEEEECCCTTCGGGGGCTTCSSS
T ss_pred EEEEeCCCCcCceE----------------EEEEeCCCCCCCCcCCceEEECCCC--CEEEEECCCCCCccccCCCCCce
Confidence 77777643211000 0111111 111233689999998 56665432 25
Q ss_pred eEEEEecCC--------------CceEEEeecCCcEEEEEEcC-CCCEEEEEcCCCcE------EEEEeecccccc----
Q psy10867 208 TCKIFDLCT--------------GEDLLSLILDTRLTCVAFDG-TEDNIYMGTSEGVI------KSFCLRQVPRTR---- 262 (343)
Q Consensus 208 ~i~~wd~~~--------------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i------~i~d~~~~~~~~---- 262 (343)
.|.-++... ...+... .......++|+| ++.++++-.....+ .+.-+.......
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~ 248 (352)
T 2ism_A 170 KILRLTPEGEPAPGNPFLGRRGARPEVYSL-GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRV 248 (352)
T ss_dssp EEEEECTTSSBCTTCTTTTCTTSCTTEEEE-CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTC
T ss_pred EEEEEcCCCCCCCCCcccCCCCCCccEEEE-cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcc
Confidence 666666542 0111111 223467789999 55544443222221 122222211000
Q ss_pred cc---cccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccccee------eee-cccCCceEEEEEccCC
Q psy10867 263 DH---HIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQC------LRT-IQHKGPVLGAFLGLLP 332 (343)
Q Consensus 263 ~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~------~~~-~~~~~~v~~~~~sp~~ 332 (343)
.. ......+...+. +......++| .+|.++++.-..+.|...+++.... ... +.....+..+++.|||
T Consensus 249 ~g~~~~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG 326 (352)
T ss_dssp CSCCCCTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred cCCCCCCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence 00 000011222332 2335677888 5677776666677788777764421 112 2234678999999999
Q ss_pred Ceeeecc
Q psy10867 333 PAIHDYD 339 (343)
Q Consensus 333 ~~l~~~~ 339 (343)
...++..
T Consensus 327 ~lyv~~~ 333 (352)
T 2ism_A 327 ALYVTTS 333 (352)
T ss_dssp CEEEEEC
T ss_pred cEEEEEe
Confidence 7766643
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.71 E-value=7.4e-05 Score=62.16 Aligned_cols=219 Identities=7% Similarity=-0.116 Sum_probs=134.5
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcc----cceecccCCcceEEEEECCC
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQE----KAQLRLICPGRISSMQASPD 89 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~s~~ 89 (343)
..|+..++........+.. .. .+..++|++ ++.+..+-...+.|+.+++.... ..............+++.+.
T Consensus 92 ~~I~~i~l~~~~~~~~~~~-~~-~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN-LR-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TEEEEECTTSCSCEEEECS-CS-CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ceeEEEccCCcceeEeccc-cC-cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 5788888876654444443 33 788999997 46666666666889999887632 22233234456788999874
Q ss_pred -CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCC
Q psy10867 90 -AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 90 -~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
+++.++ ...+.|.+.+++.......+.........|++.|.+..|+.... .+.|...++.....
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~------------ 237 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------ 237 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC------------
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc------------
Confidence 445555 45679999998765544444444456789999996665555442 36788888765321
Q ss_pred CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEE
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~ 242 (343)
.......-.....|++++++. .+.++-+..+.|..+|+........... -.....+++. .+..++
T Consensus 238 ----------~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lyw 305 (400)
T 3p5b_L 238 ----------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFW 305 (400)
T ss_dssp ----------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEE
T ss_pred ----------EEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEE
Confidence 111122335678999998763 4555556678999999865433222222 2345566663 234444
Q ss_pred EEcCCCcEEEEEeeccc
Q psy10867 243 MGTSEGVIKSFCLRQVP 259 (343)
Q Consensus 243 ~~~~d~~i~i~d~~~~~ 259 (343)
+-...+.|..+|..++.
T Consensus 306 td~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 306 TDIINEAIFSANRLTGS 322 (400)
T ss_dssp EESSSCSEEEEESSSCC
T ss_pred ecCCCCeEEEEEcCCCC
Confidence 55567788888855443
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.71 E-value=0.00011 Score=66.34 Aligned_cols=227 Identities=9% Similarity=-0.065 Sum_probs=136.3
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCE-EEE-ecCCeEEEEEccCC----ceEEEecccCCCeEEEEEecCC
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAY-IAV-SIETKLHMWQISSG----RLLATASSHYQPITIVKWSADS 131 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~-~~d~~i~v~~~~~~----~~~~~~~~~~~~v~~~~~~~~~ 131 (343)
..|+..++......... .....+..++|.+.+.. +.+ ...+.|+.+++... .....+.........|++.+.+
T Consensus 404 ~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp SSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred cceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence 46888888766544433 34566789999885544 445 35678999998753 2233343344556789998866
Q ss_pred C-EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCeE
Q psy10867 132 N-FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRTC 209 (343)
Q Consensus 132 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~i 209 (343)
. ++++-...+.|.+.++...... ............|++.|... .++++-.. .+.|
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~----------------------~l~~~~l~~P~gIaVDp~~g-~LYwtD~g~~~~I 539 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRK----------------------TLFRENGSKPRAIVVDPVHG-FMYWTDWGTPAKI 539 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEE----------------------EEEECTTCCEEEEEEETTTT-EEEEEECSSSCEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEE----------------------EEEeCCCCCcceEEEecCCC-CEEEecCCCCCeE
Confidence 4 5555566789999998754211 11122334578999999752 44444323 3789
Q ss_pred EEEecCCCceEEEeec-CCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867 210 KIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC 287 (343)
Q Consensus 210 ~~wd~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (343)
...++........+.. -.....|++++.+..|+.+. ..+.|..+++......... .-...-....+|++
T Consensus 540 ~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~---------~~~~~l~~P~glav 610 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL---------EDEKRLAHPFSLAV 610 (791)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---------ECTTTTSSEEEEEE
T ss_pred EEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe---------cCCCccCCCCEEEE
Confidence 8888764433332222 35688999998888777764 4567888887653221110 00011223456666
Q ss_pred ccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 288 SITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
.. ++++++-...+.|...|..+|+.+..+.
T Consensus 611 ~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 611 FE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp ET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred eC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 43 3445555566788888877776665554
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.71 E-value=3.9e-06 Score=75.94 Aligned_cols=131 Identities=9% Similarity=0.012 Sum_probs=77.4
Q ss_pred eEEEEecCCc-eEEEE-EecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccc--eecc-cCCcceEEEE
Q psy10867 16 AISVWEPKGG-TLLMS-YKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKA--QLRL-ICPGRISSMQ 85 (343)
Q Consensus 16 ~i~iwd~~~~-~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~--~~~~-~~~~~v~~~~ 85 (343)
.|+++|+.++ +.+.. +. . ....++|+||++.|+....+ ..|.++++.+++.. .++. ........+.
T Consensus 202 ~l~v~dl~~g~~~l~~~~~---~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 277 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVS---G-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMY 277 (751)
T ss_dssp EEEEEETTCTTCCCCCCEE---E-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEE
T ss_pred EEEEEECCCCCEeCCcccc---C-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEE
Confidence 4899999888 63211 11 1 23578899998544443332 26788888776532 2221 2233467889
Q ss_pred ECCCCCEEEE-e---cCCeEEEEEccCC--ce--EEEecccCCCeEEEEEecCCCEEEEecCC----CeEEEeecCc
Q psy10867 86 ASPDAAYIAV-S---IETKLHMWQISSG--RL--LATASSHYQPITIVKWSADSNFIVTGGED----GTICVWQLSR 150 (343)
Q Consensus 86 ~s~~~~~l~~-~---~d~~i~v~~~~~~--~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~ 150 (343)
|+|||++|+. + ....|+++|+.++ +. ........+....+.|+..+.+++....+ ..|..+++.+
T Consensus 278 ~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 278 KAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 9999998885 3 2347899999876 33 33333445556666665444444444433 3566666654
No 287
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.69 E-value=5.6e-05 Score=59.35 Aligned_cols=217 Identities=10% Similarity=0.159 Sum_probs=141.0
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI 93 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 93 (343)
+..|.|-|+..+....+-.-.. -+.-.+|..+++|.-.. ..+.++|+++.+.++...- ...|.-=.|- +.+.|
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALrag-~~LQiFnletK~klks~~~-~e~VvfWkWi-s~~~L 120 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKAG-KTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTV 120 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEEEC-SSCEEEEEEC-SSSEE
T ss_pred CCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEecC-CeEEEechHHhhhhcceec-CCccEEEEec-CCCeE
Confidence 3467777877654433222221 24456899998888776 8999999999988765533 4567777776 44556
Q ss_pred EEecCCeEEEEEccC-CceEEEecccC----CCeEEEEEecCCCEEEEecC-------CCeEEEeecCccceeeeeecCC
Q psy10867 94 AVSIETKLHMWQISS-GRLLATASSHY----QPITIVKWSADSNFIVTGGE-------DGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 94 ~~~~d~~i~v~~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
+--.+..|+-|++.. ..+.+.+..|. ..|..-..+++.++++..+- .|.+.+|..+..
T Consensus 121 ~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---------- 190 (365)
T 2xzh_A 121 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------- 190 (365)
T ss_dssp EEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----------
T ss_pred EEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc----------
Confidence 655688999999974 35666666553 35666666778887665432 467888888775
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeC---CCeEEEEecCCC---ce-----EEEeec----
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSH---DRTCKIFDLCTG---ED-----LLSLIL---- 225 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~---d~~i~~wd~~~~---~~-----~~~~~~---- 225 (343)
.-+.+++|......+.+..+... .+++.+.. .+.+++-++... .. ...+..
T Consensus 191 -------------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea 257 (365)
T 2xzh_A 191 -------------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 257 (365)
T ss_dssp -------------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC
T ss_pred -------------ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc
Confidence 55667778666555544322211 23443333 268899888543 11 111111
Q ss_pred -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867 226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR 260 (343)
Q Consensus 226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 260 (343)
..-..++..++....++.-+.-|.|++||+.+...
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE
Confidence 22367788898889999999999999999998544
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.67 E-value=8.1e-05 Score=60.15 Aligned_cols=230 Identities=11% Similarity=0.070 Sum_probs=126.8
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecc---cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCce-EE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRL---ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRL-LA 113 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~-~~ 113 (343)
.+.++.+.| +.+++++.. +.|.. ..+.++.-.... .+++.+..+.+.+++.+++++.++.|.. ..+.|+. ..
T Consensus 81 ~~~~i~~~~-~~~~~~g~~-g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~ 156 (327)
T 2xbg_A 81 RFNSVSFQG-NEGWIVGEP-PIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQA 156 (327)
T ss_dssp EEEEEEEET-TEEEEEEET-TEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEE
T ss_pred cEEEEEecC-CeEEEEECC-CeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEE
Confidence 678999987 556666655 64443 223333222111 2345678888877888888776765432 2223432 22
Q ss_pred EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867 114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK 193 (343)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (343)
........+..+.+.+++.+++.+...+..+-+|-. +.. ++.+ .......+..+.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~t-------------------W~~~--~~~~~~~~~~~~~~~ 214 (327)
T 2xbg_A 157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTA-------------------WEPH--NRTTSRRLHNMGFTP 214 (327)
T ss_dssp EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSS-------------------CEEE--ECCSSSCEEEEEECT
T ss_pred eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCc-------------------eeEC--CCCCCCccceeEECC
Confidence 233455678999999988877776554333333321 111 0111 122445678888888
Q ss_pred CCCceEEEEeeCCCeEEEEecCCCceEEEeec-----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC
Q psy10867 194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL-----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD 268 (343)
Q Consensus 194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 268 (343)
++ .+ +.++.+|.+++.+...++.-..+.. ...+..+.+.+++..++++. ++.|. +...... ....
T Consensus 215 ~g--~~-~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~-tW~~---- 284 (327)
T 2xbg_A 215 DG--RL-WMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQ-TWQQ---- 284 (327)
T ss_dssp TS--CE-EEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTS-SCEE----
T ss_pred CC--CE-EEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCc-ccEE----
Confidence 77 44 4555678877764232333222221 23588999998877766654 66552 3322221 1110
Q ss_pred CCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 269 STSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
+.........+..+.|.++++ +++++.+|.|.-++
T Consensus 285 ---~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 285 ---DVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp ---CGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ---cCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 111111234567888876554 66667788777665
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.62 E-value=0.00012 Score=59.69 Aligned_cols=238 Identities=13% Similarity=0.074 Sum_probs=123.6
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc--e---ecccCCcceEEEEECCC---C-CEEEE-ecC-----CeEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA--Q---LRLICPGRISSMQASPD---A-AYIAV-SIE-----TKLH 102 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~--~---~~~~~~~~v~~~~~s~~---~-~~l~~-~~d-----~~i~ 102 (343)
....++|.|+|+++++-.. |.|.+++ +++.. . ...........++|+|+ + .+.++ ... +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~-g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERP-GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEEETT-TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEEeCC-CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 6789999999998887766 9999998 33321 1 11122456889999998 4 44444 222 6788
Q ss_pred EEEccCCce------EEEec---ccCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecCccceeeeeecC
Q psy10867 103 MWQISSGRL------LATAS---SHYQPITIVKWSADSNFIVTGGED-------------GTICVWQLSRLICKQTVAFG 160 (343)
Q Consensus 103 v~~~~~~~~------~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~ 160 (343)
.++...+.. +..+. ........++|.|+|.+.++.+.. |.|..++.... +...
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~-----~p~~ 183 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE-----PAPG 183 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS-----BCTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC-----CCCC
Confidence 888765421 11232 111223689999999876664432 34544444321 0000
Q ss_pred CCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeCCCe--------EEEEecCCCc-------------
Q psy10867 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSHDRT--------CKIFDLCTGE------------- 218 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~--------i~~wd~~~~~------------- 218 (343)
.+.... ......+ ...++ .....++|+| ++ .++++-...+. |.+. ..+.
T Consensus 184 npf~~~---~~~~~~i-~a~G~-rnp~g~a~d~~~g--~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 184 NPFLGR---RGARPEV-YSLGH-RNPQGLAWHPKTG--ELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGND 254 (352)
T ss_dssp CTTTTC---TTSCTTE-EEECC-SEECCCEECTTTC--CEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCC
T ss_pred CcccCC---CCCCccE-EEEcC-CCcccEEEECCCC--CEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCC
Confidence 000000 0000011 11223 2356788998 55 44444322222 3332 2222
Q ss_pred -----eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCE
Q psy10867 219 -----DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGIT 293 (343)
Q Consensus 219 -----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 293 (343)
+...+........++| .++..+++....+.|...++.......... . ...+......+..+++.|||.+
T Consensus 255 ~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~----~-~~~~~~~~~rp~~v~~~pdG~l 328 (352)
T 2ism_A 255 PRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVL----R-VETALSGFGRLREVQVGPDGAL 328 (352)
T ss_dssp TTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEE----E-EEEEEESSCCEEEEEECTTSCE
T ss_pred CCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeec----c-hheecccCCCeeEEEECCCCcE
Confidence 2222322334667777 456666666667788888877543210000 0 0011112356889999999986
Q ss_pred EEEEe
Q psy10867 294 LLSSS 298 (343)
Q Consensus 294 l~s~~ 298 (343)
+++..
T Consensus 329 yv~~~ 333 (352)
T 2ism_A 329 YVTTS 333 (352)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66653
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.61 E-value=0.00024 Score=62.64 Aligned_cols=235 Identities=9% Similarity=-0.051 Sum_probs=146.0
Q ss_pred CCceEEEEEcCCCeEEEEeCCCcccceecc-cCCcceEEEEECCCCCEEE-E-ecCCeEEEEEccCCceEEEecccCCCe
Q psy10867 46 GNDYVLGVEKGKPMIQAWPVNSQEKAQLRL-ICPGRISSMQASPDAAYIA-V-SIETKLHMWQISSGRLLATASSHYQPI 122 (343)
Q Consensus 46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v 122 (343)
|...++.+ .. ..|+..++++........ .....+..++|.+.+..|. + ..++.|+.++++.......+.......
T Consensus 5 p~~~Ll~s-~~-~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 5 PEAFLLFS-RR-ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp CCCEEEEE-ET-TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred CCcEEEEE-eC-CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 44445554 44 689999998765432222 2345688999998665555 4 357899999987654444443333456
Q ss_pred EEEEEecCCC-EEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEE
Q psy10867 123 TIVKWSADSN-FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVA 201 (343)
Q Consensus 123 ~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 201 (343)
..+++.+.+. +.++-...+.|.+.++...... ......-.....+++.|... .+++
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~----------------------~l~~~~l~~P~~iavdp~~G-~lY~ 139 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ----------------------VLVWKDLDSPRALALDPAEG-FMYW 139 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCE----------------------EEECSSCCCEEEEEEETTTT-EEEE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE----------------------EEEeCCCCCcccEEEccCCC-eEEE
Confidence 7889987554 4455556788999998754211 11112334568999998542 4444
Q ss_pred Ee-eCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCcccccc
Q psy10867 202 SV-SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE 279 (343)
Q Consensus 202 ~~-~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (343)
+- +..+.|...++...........-.....++++++++.|+.+. ..+.|..+|+..... . .+....
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~-----------v~~~~l 207 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E-----------VIADDL 207 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E-----------EEEECC
T ss_pred eCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E-----------EeeccC
Confidence 43 235778888876544433333445688999999888777764 467888888865322 1 122223
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
.....+++.. +.++++-...+.|...|..+|+....+.
T Consensus 208 ~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 208 PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 3456788765 4555565567889989877776554443
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.60 E-value=0.00011 Score=58.70 Aligned_cols=198 Identities=11% Similarity=0.118 Sum_probs=123.2
Q ss_pred ccceEEEecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCCce-------EEEEE-cC--CCeEEEEeCC--Cccc
Q psy10867 3 LLNEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDY-------VLGVE-KG--KPMIQAWPVN--SQEK 70 (343)
Q Consensus 3 ~v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~-~~--~~~i~iw~~~--~~~~ 70 (343)
+-.++++..+.++-+.+||+ +|+.++.+.. + .++.+..-|+-. ++++. .. +++|.+|++. +++
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g-~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--G-KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSCEEEEECC--S-CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred CCccEEEEEcCCCCEEEEcC-CCcEEEEccC--C-CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence 34566777788899999999 8999998875 3 567777666321 33444 33 5799999663 333
Q ss_pred ceeccc------CC-cceEEEEE--CCC-CC-EEE-EecCCeEEEEEcc-------CCceEEEecccCCCeEEEEEecCC
Q psy10867 71 AQLRLI------CP-GRISSMQA--SPD-AA-YIA-VSIETKLHMWQIS-------SGRLLATASSHYQPITIVKWSADS 131 (343)
Q Consensus 71 ~~~~~~------~~-~~v~~~~~--s~~-~~-~l~-~~~d~~i~v~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~ 131 (343)
+..... .. ..+..+++ +|. ++ ++. +..+|.+..|++. +.+.++++.. .+.+..+...+..
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~ 191 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEY 191 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCC
Confidence 322211 11 45666777 774 44 333 4678999999883 2355666654 3568889999888
Q ss_pred CEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeee--cccccceEEEEee--cCCCceEEEEee-CC
Q psy10867 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK--SQHSLPVTHVTLS--KLGAKSRVASVS-HD 206 (343)
Q Consensus 132 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~~~~~l~~~~-~d 206 (343)
..|+.+-++..|..++.+...... .+.+... ..-...+..|++. +++. .+|++++ .+
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~-----------------~~~v~~~~~g~l~aDvEGLai~~~~~g~-gyLivSsQG~ 253 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSN-----------------GTVIDRADGRHLTRDIEGLTIYYAADGK-GYLMASSQGN 253 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSC-----------------CEEEEEBSSSSBCSCEEEEEEEECGGGC-EEEEEEEGGG
T ss_pred CeEEEecccceEEEEeCCcCCCCC-----------------ceEEEEecCCccccCcceEEEEecCCCC-EEEEEEcCCC
Confidence 899999998766666644221000 0122221 1222467888884 4443 2455544 57
Q ss_pred CeEEEEecC-CCceEEEee
Q psy10867 207 RTCKIFDLC-TGEDLLSLI 224 (343)
Q Consensus 207 ~~i~~wd~~-~~~~~~~~~ 224 (343)
+++.+||.+ +.+.+..+.
T Consensus 254 ~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 254 SSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp TEEEEEESSTTCCEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEE
Confidence 899999986 556666554
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.60 E-value=0.00026 Score=62.36 Aligned_cols=314 Identities=9% Similarity=-0.009 Sum_probs=166.3
Q ss_pred EecCCCCeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcC-CCeEEEEeCCCcccceecccCCcceEEEEE
Q psy10867 9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKG-KPMIQAWPVNSQEKAQLRLICPGRISSMQA 86 (343)
Q Consensus 9 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~-~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 86 (343)
++-.+.+.|.+.++........+...-. .+..|++.|. |.++.+-.. .+.|...+++...........-...+.+++
T Consensus 100 ~~d~~~~~I~v~~~dG~~~~~l~~~~l~-~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glal 178 (619)
T 3s94_A 100 WTDSETNRIEVSNLDGSLRKVLFWQELD-QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTL 178 (619)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCS-CCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EEeCCCCEEEEEECCCCCEEEEEeCCCC-CCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEE
Confidence 3333467888888754333222333444 7889999986 556555432 357777777654433333233456789999
Q ss_pred CCCCCEEEE--ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCC-
Q psy10867 87 SPDAAYIAV--SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG- 163 (343)
Q Consensus 87 s~~~~~l~~--~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~- 163 (343)
.+++..|.. ...+.|...+++.........+.......+++.++ ..+++-...+.|...|..+++....+......
T Consensus 179 d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p 257 (619)
T 3s94_A 179 DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSP 257 (619)
T ss_dssp ETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCC
T ss_pred EccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCC
Confidence 987665554 45678999988644332222212222346777654 45555556778988888776544333211100
Q ss_pred -------------CCCCcc--ccccceeeeecccccceEEEEeecCC-------------CceEEEEeeCCCeEEEEecC
Q psy10867 164 -------------SSGKGV--TGLTEPLHVKSQHSLPVTHVTLSKLG-------------AKSRVASVSHDRTCKIFDLC 215 (343)
Q Consensus 164 -------------~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~-------------~~~~l~~~~~d~~i~~wd~~ 215 (343)
...... ...-..+.........-.|. +|.| +..+|+.+ ..+.|+..++.
T Consensus 258 ~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~--C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~ 334 (619)
T 3s94_A 258 MDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCA--CPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLD 334 (619)
T ss_dssp SEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEE--CCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESS
T ss_pred cEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEe--CCchheecccCcccCCCCceEEEEE-cccceEEEecC
Confidence 000000 00001111111111111221 2221 11233333 34567777776
Q ss_pred CCceE-EEee--cCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccC-
Q psy10867 216 TGEDL-LSLI--LDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT- 290 (343)
Q Consensus 216 ~~~~~-~~~~--~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~- 290 (343)
..... ..+. .-..+..++|++.+..|+.+. ..+.|+.+++....... .....-..+..+++.+.
T Consensus 335 ~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~-----------v~~~~~~~p~GlAvD~~~ 403 (619)
T 3s94_A 335 TPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF-----------VVTAQIAHPDGIAVDWVA 403 (619)
T ss_dssp STTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-----------EECSSCSCCCEEEEETTT
T ss_pred CCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE-----------EEECCCCCcCceEEeccc
Confidence 55421 1122 234578899999777666654 57788888876532111 11112245678999874
Q ss_pred CCEEEEEeCCCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecc
Q psy10867 291 GITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 291 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+++.++-+..+.|.+.++... ....+. ......++++.|...+|+.++
T Consensus 404 ~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~~P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 404 RNLYWTDTGTDRIEVTRLNGT-MRKILISEDLEEPRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSC-SCEEEECTTCCSEEEEEEETTTTEEEEEE
T ss_pred CcEEEEeCCCCcEEEEeCCCC-eEEEEEECCCCCeeeEEEEcCCCcEEEec
Confidence 445556666788999987643 333332 445688999999766665544
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=9.7e-05 Score=62.45 Aligned_cols=263 Identities=10% Similarity=0.002 Sum_probs=143.2
Q ss_pred ceEEEEeCC--ceEEEEEcCCCeEEEEeCCCcccceeccc---CCcceEEEEE-------CCCCCEEE-EecCC------
Q psy10867 39 PHSMCLLGN--DYVLGVEKGKPMIQAWPVNSQEKAQLRLI---CPGRISSMQA-------SPDAAYIA-VSIET------ 99 (343)
Q Consensus 39 v~~~~~~~~--~~~~~~~~~~~~i~iw~~~~~~~~~~~~~---~~~~v~~~~~-------s~~~~~l~-~~~d~------ 99 (343)
...|+|+|. +.++++....+.|++.|++++........ .......++| ++++..|. +...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 468999983 56666665556899999888776543322 2235899999 99998444 43322
Q ss_pred -eEEEEEccC-CceE-----EEecccCCCeEEEEEec-CCCEEEEecCCCeEEEeecC-------ccceeeeeecCCCCC
Q psy10867 100 -KLHMWQISS-GRLL-----ATASSHYQPITIVKWSA-DSNFIVTGGEDGTICVWQLS-------RLICKQTVAFGIPGS 164 (343)
Q Consensus 100 -~i~v~~~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~ 164 (343)
.|.+++... +... ..+.... ....++++| ++.++++-..++.|..+|+. ++..........
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~--- 296 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN--- 296 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC---
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc---
Confidence 366665443 2221 2222222 345778899 45556666778899999997 332200000000
Q ss_pred CCCccccccceeeeecccccceEEEEeecCCCce-EEEEeeCCCeEEEEecC--CCce--EEEeec----C---------
Q psy10867 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS-RVASVSHDRTCKIFDLC--TGED--LLSLIL----D--------- 226 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~~wd~~--~~~~--~~~~~~----~--------- 226 (343)
....+.+.. .+.......++|+|++ + ++++-+....|+.++.. ++.. ...+.. .
T Consensus 297 -----~g~~~~l~~-~~~~~~p~~ia~~p~G--~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~ 368 (496)
T 3kya_A 297 -----PNTFKQLFT-IADPSWEFQIFIHPTG--KYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTE 368 (496)
T ss_dssp -----TTTEEEEEE-CSSSSCCEEEEECTTS--SEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGG
T ss_pred -----ccccceeEe-cCCCCCceEEEEcCCC--CEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccc
Confidence 000001111 1223456799999999 5 45555677889986653 3221 011211 0
Q ss_pred ---CcEE-EEEEc-------CCCCEEEEEcCCCcEEEEEeecccccccccccCCCC--------C------CccccccCc
Q psy10867 227 ---TRLT-CVAFD-------GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS--------N------PDFIGHEKQ 281 (343)
Q Consensus 227 ---~~i~-~~~~~-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--------~------~~~~~~~~~ 281 (343)
.... .++.. +++.++++-..+..|+.++... . ...+. ..+.. . ......-..
T Consensus 369 a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~-v~Tia-G~g~~~~~~~~~~~G~~dG~~~~~a~f~~ 445 (496)
T 3kya_A 369 ARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-I-VSTYA-GRGASTSLADGNQWGTDDGDLREVARFRD 445 (496)
T ss_dssp CBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-B-EEEEE-ESCTTHHHHHSCSCCCCCEETTTTCCCSS
T ss_pred cccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-C-EEEEe-cccccccccCccccccCCCCchhhhhcCC
Confidence 1234 45554 4556666666788898887322 1 11110 00000 0 000111235
Q ss_pred EEEEEEccC-CCEEEEEeCCCcEEEEecccceeeee
Q psy10867 282 VTSLSCSIT-GITLLSSSADETLKIWHTISRQCLRT 316 (343)
Q Consensus 282 v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~ 316 (343)
...|+++++ +.++++=..+..|+.++++.......
T Consensus 446 P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 446 VSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECCCC----
T ss_pred CcEEEEECCCCEEEEEeCCCCEEEEEECCCCccccc
Confidence 788999997 77777777788999999876554443
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.57 E-value=0.00016 Score=58.34 Aligned_cols=260 Identities=11% Similarity=-0.034 Sum_probs=142.3
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceec-c---cCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR-L---ICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLA 113 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~ 113 (343)
.+.++.|.+++..++++.. |.| +...+.++.-... . .....+..+.|.+ +..++++..+.|.. ..+.|+.-.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~-g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~tW~ 112 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVN-ATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQSWS 112 (327)
T ss_dssp CEEEEEESSSSCEEEEETT-TEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTSSCE
T ss_pred cEEEEEECCCCcEEEEcCC-CeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCCCce
Confidence 7899999887777777765 755 3333333221111 1 1244688999986 56666677775544 333343322
Q ss_pred Eec---ccCCCeEEEEEecCCCEEEEecCCCeEE-EeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEE
Q psy10867 114 TAS---SHYQPITIVKWSADSNFIVTGGEDGTIC-VWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189 (343)
Q Consensus 114 ~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 189 (343)
... .+.+.+..+.+.+++..++.+. +|.|. -.| .+..-. .+ .......+..+
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~-------------------~~--~~~~~~~~~~~ 168 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQ-------------------AL--VQEAIGVMRNL 168 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEE-------------------EE--ECSCCCCEEEE
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCE-------------------Ee--ecCCCcceEEE
Confidence 222 2335577888877777666654 45442 222 121111 11 12334567889
Q ss_pred EeecCCCceEEEEeeCCCeEEEEec--CCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867 190 TLSKLGAKSRVASVSHDRTCKIFDL--CTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ 267 (343)
Q Consensus 190 ~~~~~~~~~~l~~~~~d~~i~~wd~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 267 (343)
.+.+++ .+++.+...+..+-.|- .+-+.+ .......+..+.+.+++..+++ +.+|.+++.+......-..
T Consensus 169 ~~~~~~--~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~---- 240 (327)
T 2xbg_A 169 NRSPSG--EYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGE---- 240 (327)
T ss_dssp EECTTS--CEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECC----
T ss_pred EEcCCC--cEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEe----
Confidence 999877 66665544443444442 222222 1224567889999998876654 4577777663211111000
Q ss_pred CCCCCCcc-ccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc----cCCceEEEEEccCCCeeeecc
Q psy10867 268 DSTSNPDF-IGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ----HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 268 ~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+..- ..+...+..+.+.+++.+++++ .+|.| ++....|+.-..+. ....+.++.|.++++.++++.
T Consensus 241 ----~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 241 ----LLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp ----CBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS
T ss_pred ----ccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC
Confidence 0000 0122358889999887766665 46766 34444454433333 235678898987776665543
No 295
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.56 E-value=0.00019 Score=58.74 Aligned_cols=217 Identities=10% Similarity=0.159 Sum_probs=142.5
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI 93 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 93 (343)
...|.|-|+..+..+.+-.-.. -+.-.+|..+++|.-.. .++.|+|+++.+.++...- ...|.-=.|- +.+.|
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A----dsAIMnP~~~iiALrag-~~lQiFnle~K~klks~~~-~e~VvfWkWi-s~~~l 119 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKAG-KTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTV 119 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC----SEEEECSSSSCEEEEET-TEEEEEETTTTEEEEEEEC-SSCCCEEEEE-ETTEE
T ss_pred CCeEEEEECCCCCcceeccccc----ceeeeCCCCcEEEEecC-CeEEEEchHHhhhhcceec-CCCceEEEec-CCCeE
Confidence 4577788877654433222221 24556888888888776 8999999999887765543 3355555665 34556
Q ss_pred EEecCCeEEEEEccC-CceEEEecccC----CCeEEEEEecCCCEEEEec-------CCCeEEEeecCccceeeeeecCC
Q psy10867 94 AVSIETKLHMWQISS-GRLLATASSHY----QPITIVKWSADSNFIVTGG-------EDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 94 ~~~~d~~i~v~~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
+--.+..|+-|++.. ..+.+.+..|. ..|..-..+++.++++..+ -.|.+.+|..+..
T Consensus 120 ~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---------- 189 (494)
T 1bpo_A 120 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------- 189 (494)
T ss_dssp EEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC----------
T ss_pred EEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc----------
Confidence 666688999999974 35666666553 3566666778888776543 2467888888775
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeC---CCeEEEEecCCC---c-----eEEEeec----
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSH---DRTCKIFDLCTG---E-----DLLSLIL---- 225 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~---d~~i~~wd~~~~---~-----~~~~~~~---- 225 (343)
.-+.+++|......+.+..+... .+++.+.. .+.+++-++... . ....+..
T Consensus 190 -------------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~ 256 (494)
T 1bpo_A 190 -------------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (494)
T ss_dssp -------------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS
T ss_pred -------------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc
Confidence 55667788776665555432211 33444433 278999988543 1 1111111
Q ss_pred -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccc
Q psy10867 226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPR 260 (343)
Q Consensus 226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 260 (343)
..-..++..++....++.-+.-|.|++||+.+...
T Consensus 257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred ccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence 22367888999999999999999999999998644
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.56 E-value=0.00016 Score=58.00 Aligned_cols=226 Identities=7% Similarity=-0.076 Sum_probs=137.7
Q ss_pred eEEEecCCCCeEEEEecCCce--EEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccc-eecccCCcce
Q psy10867 6 EVAFSYDGSGAISVWEPKGGT--LLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKA-QLRLICPGRI 81 (343)
Q Consensus 6 ~~~~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~-~~~~~~~~~v 81 (343)
.++|+. ...|+..++.... ....+.+. . .+.+++|.+ ++.+..+-...+.|..++.++.... ..........
T Consensus 6 ~ll~~~--~~~I~~i~l~~~~~~~~~~~~~~-~-~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 6 LLLYAN--RRDLRLVDATNGKENATIVVGGL-E-DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp EEEEEC--EEEEEEEETTCTTSCCEEEEEEE-E-EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred EEEEEc--cCeEEEEECCCCceEEEEEecCC-C-ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 455654 3578889987653 22222222 2 567899998 4677777666689999998876432 2222223456
Q ss_pred EEEEECCCC-CEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeee
Q psy10867 82 SSMQASPDA-AYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTV 157 (343)
Q Consensus 82 ~~~~~s~~~-~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~ 157 (343)
..+++.+.+ .++.+ ...+.|.+++++.......+.........+++.|.+..|+.+. ..+.|...++.....
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---- 157 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---- 157 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC----
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe----
Confidence 678888744 44445 4567999999875443333334445678999998655555544 357788887764311
Q ss_pred ecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcC
Q psy10867 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDG 236 (343)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~ 236 (343)
.......-...+.+++++++. .+.++-+..+.|..+|+.......... .......+++..
T Consensus 158 ------------------~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 158 ------------------FIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE 218 (318)
T ss_dssp ------------------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET
T ss_pred ------------------EEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC
Confidence 111112234568999998663 556666678899999986433222222 234466777753
Q ss_pred CCCEEEEEcCCCcEEEEEeeccc
Q psy10867 237 TEDNIYMGTSEGVIKSFCLRQVP 259 (343)
Q Consensus 237 ~~~~l~~~~~d~~i~i~d~~~~~ 259 (343)
+..+.+-...+.|..++..++.
T Consensus 219 -~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 219 -DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp -TEEEEEETTTTEEEEEETTTCC
T ss_pred -CEEEEEecCCCeEEEEECCCCC
Confidence 3444455567788888875544
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.55 E-value=3.3e-06 Score=75.47 Aligned_cols=219 Identities=7% Similarity=-0.124 Sum_probs=126.5
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCC----cccceecccCCcceEEEEECCC
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNS----QEKAQLRLICPGRISSMQASPD 89 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~s~~ 89 (343)
+.|+..++.+.+....+... . .+..++|.+. +.++.+-...+.|+.+++.+ ................|++.+.
T Consensus 386 ~~I~~id~~~~~~~~~~~~~-~-~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNL-R-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TC-CEECTTSCCEECCSCCC-T-TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred cceEEEeCCCCcceeeeccC-c-ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 46777787766554444433 3 6778999985 45655555567899999875 2222222222234566888754
Q ss_pred -CCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCC
Q psy10867 90 -AAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 90 -~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
++++++ ...+.|.++++........+.........+++.|.+..|+.+.. .+.|..+++......
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~----------- 532 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY----------- 532 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-----------
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-----------
Confidence 455555 45678999998755444444333345678899986655554442 267777776542110
Q ss_pred CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEE
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~ 242 (343)
......-.....|+++|++. .++++-+..+.|..+++........+.. ......+++..+ .+++
T Consensus 533 -----------~l~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lyw 599 (699)
T 1n7d_A 533 -----------SLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFW 599 (699)
T ss_dssp -----------EESCSSCSSCCCEEECTTTC-CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEE
T ss_pred -----------EEEeCCCCCccEEEEeccCC-EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEE
Confidence 01111224467899998763 5666666778999999864333222221 122345555543 3444
Q ss_pred EEcCCCcEEEEEeeccc
Q psy10867 243 MGTSEGVIKSFCLRQVP 259 (343)
Q Consensus 243 ~~~~d~~i~i~d~~~~~ 259 (343)
+....+.|..++..++.
T Consensus 600 td~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 600 TDIINEAIFSANRLTGS 616 (699)
T ss_dssp ECSTTTCEEEEETTTEE
T ss_pred EeCCCCeEEEEEccCCC
Confidence 44557789988865443
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.52 E-value=8.3e-07 Score=79.29 Aligned_cols=238 Identities=10% Similarity=-0.062 Sum_probs=135.1
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEE--ecCCeEEEEEccC----CceEEEecccCCCeEEEEEecC-
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV--SIETKLHMWQISS----GRLLATASSHYQPITIVKWSAD- 130 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~d~~i~v~~~~~----~~~~~~~~~~~~~v~~~~~~~~- 130 (343)
+.|+..++.+.+...... ....+..++|.+.+..|.. ...+.|+.+++.. ......+.........|++.+.
T Consensus 386 ~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred cceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 578888887765543332 2345678899987666654 3567899999875 2222222212223456788754
Q ss_pred CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeC-CCeE
Q psy10867 131 SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH-DRTC 209 (343)
Q Consensus 131 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~i 209 (343)
++++++-...+.|.+.++....... ...........+++.|.+. .++++-.. .+.|
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~----------------------l~~~~~~~P~giavDp~~g-~ly~td~~~~~~I 521 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKT----------------------LFREQGSKPRAIVVDPVHG-FMYWTDWGTPAKI 521 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEE----------------------ECCCSSCCCCCEECCSSSS-CCEECCCSSSCCE
T ss_pred CcEEEEeccCCeEEEEecCCCceEE----------------------EEeCCCCCcceEEEccCCC-cEEEcccCCCCeE
Confidence 4455555567889999987542211 1111223456788988652 34444333 3778
Q ss_pred EEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEE
Q psy10867 210 KIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSC 287 (343)
Q Consensus 210 ~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (343)
..+++.......... .-.....|+++|++..|+.+ ...+.|..+++........ ............|++
T Consensus 522 ~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~---------~~~~~~~~~P~glav 592 (699)
T 1n7d_A 522 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI---------LEDEKRLAHPFSLAV 592 (699)
T ss_dssp EBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE---------CCCSSSCSSCCCCEE
T ss_pred EEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE---------EecCCcCCCceEeEE
Confidence 888765332222221 22346789999987666555 4567899998864222111 011111123345566
Q ss_pred ccCCCEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc
Q psy10867 288 SITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG 329 (343)
Q Consensus 288 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 329 (343)
..+ .++++....+.|..++..+|+.+..+. .......+++.
T Consensus 593 d~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 593 FED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp ETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred ECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 544 455566677899999988888887775 33334455443
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.52 E-value=0.00015 Score=58.76 Aligned_cols=198 Identities=8% Similarity=-0.001 Sum_probs=115.4
Q ss_pred ceEEEEECCCCCEEEEe-------------cCCeEEEEEccC--CceEE-Eecc-----cCCCeEEEEEec--CCC-EEE
Q psy10867 80 RISSMQASPDAAYIAVS-------------IETKLHMWQISS--GRLLA-TASS-----HYQPITIVKWSA--DSN-FIV 135 (343)
Q Consensus 80 ~v~~~~~s~~~~~l~~~-------------~d~~i~v~~~~~--~~~~~-~~~~-----~~~~v~~~~~~~--~~~-~l~ 135 (343)
....++..|+|..++++ .+|.|.++|+++ ++... .+.+ ..-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34566677888766665 588999999874 23211 2222 223567888766 343 344
Q ss_pred Ee-cC--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEee-------
Q psy10867 136 TG-GE--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVS------- 204 (343)
Q Consensus 136 s~-~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~------- 204 (343)
.+ .. +.+|.+|++........ .+....+ .-...+.+.+.++| .+.++..
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~------------------~~~~~~g~~~~~pND~~v~~~G--~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLL------------------HLKTIRHKLLPSVNDIVAVGPE--HFYATNDHYFIDPY 190 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEE------------------EEEEECCTTCSSEEEEEEEETT--EEEEEESCSCSSHH
T ss_pred EEECCCCCCeEEEEEEECCCCEEE------------------EEeccccCCCCCCceEEEeCCC--CEEecCCcEeCCcc
Confidence 43 22 46788887765422111 2222222 23457899999998 6666643
Q ss_pred ----------CCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEc-CCCcEEEEEeecccccccccccCCCCCC
Q psy10867 205 ----------HDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGT-SEGVIKSFCLRQVPRTRDHHIQDSTSNP 273 (343)
Q Consensus 205 ----------~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 273 (343)
..|.+..+|. ++.......-...+.++|+||++.|+++. ..+.|+.|++......... .
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~--------~ 260 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL--------R 260 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE--------E
T ss_pred cccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC--------E
Confidence 1245555554 33332223345678999999999888764 5789999998742221110 1
Q ss_pred ccccccCcEEEEEEcc-CCCEEEEEeCC-CcEEEEec
Q psy10867 274 DFIGHEKQVTSLSCSI-TGITLLSSSAD-ETLKIWHT 308 (343)
Q Consensus 274 ~~~~~~~~v~~~~~s~-~~~~l~s~~~d-g~i~iwd~ 308 (343)
.+ ......-.+++.+ +|++.+++..+ +.|..|+.
T Consensus 261 ~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 261 VL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred EE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 11 1235677899999 59887766544 23433443
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.48 E-value=0.00057 Score=60.28 Aligned_cols=226 Identities=5% Similarity=-0.139 Sum_probs=139.7
Q ss_pred ceEEEecCCCCeEEEEecCCceEEEEEecC-CCCcceEEEEeCC-ceEEEEEcCCCeEEEEeCCCcccceecccCCcceE
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGA-SVLSPHSMCLLGN-DYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRIS 82 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~ 82 (343)
.-++|+ ....|+..++.+.+....+... -. .+..++|++. +.++.+...++.|..++++................
T Consensus 7 ~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~-~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 7 AFLLFS--RRADIRRISLETNNNNVAIPLTGVK-EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE 83 (628)
T ss_dssp CEEEEE--ETTEEEEEESSCTTCEEECCCCSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred cEEEEE--eCCcEEEEECCCCCcceEEEcCCCC-ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence 346666 3457899998765544333322 23 6789999985 56666766678999999876544333332234567
Q ss_pred EEEECCCCCEE-EE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEec--CCCeEEEeecCccceeeeee
Q psy10867 83 SMQASPDAAYI-AV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGG--EDGTICVWQLSRLICKQTVA 158 (343)
Q Consensus 83 ~~~~s~~~~~l-~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~ 158 (343)
.+++.+.+..| .+ ...+.|.+.+++.......+...-.....|++.|....|+... ..+.|...++.....
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~----- 158 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER----- 158 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-----
Confidence 88887655544 45 4567999999875543333333445678999998555555444 246777777765321
Q ss_pred cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCC
Q psy10867 159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTE 238 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (343)
..+...-.....+++++++. .+.++-...+.|..+|+.................+++.. +
T Consensus 159 ------------------~~l~~~~~~P~GlalD~~~~-~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~ 218 (628)
T 4a0p_A 159 ------------------TTLVPNVGRANGLTIDYAKR-RLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D 218 (628)
T ss_dssp ------------------EEEECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T
T ss_pred ------------------EEEECCCCCcceEEEccccC-EEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C
Confidence 11112345678999999763 555565667899999986544422222333456777764 3
Q ss_pred CEEEEEcCCCcEEEEEeecc
Q psy10867 239 DNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 239 ~~l~~~~~d~~i~i~d~~~~ 258 (343)
..+++-...+.|...|..+.
T Consensus 219 ~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 219 YIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEEEETTTTEEEEEETTTC
T ss_pred EEEEecCCCCEEEEEECCCC
Confidence 33344445778888886544
No 301
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.46 E-value=0.00078 Score=60.90 Aligned_cols=217 Identities=9% Similarity=-0.095 Sum_probs=131.0
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCc----ccceecccCCcceEEEEECCC
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQ----EKAQLRLICPGRISSMQASPD 89 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~s~~ 89 (343)
..|+..++...+....+.. .. .+..++|.+ ++.++.+-...+.|+.+++... ...............|++.+.
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~-~~-~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN-LR-NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp SSEEEECTTSCCCEEEECS-CS-SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cceeEeeccCCcceeeecC-CC-ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 3567777765554444443 33 678999998 5677777766688999988753 222223223455678888877
Q ss_pred CCEEE-E-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecC--CCeEEEeecCccceeeeeecCCCCCC
Q psy10867 90 AAYIA-V-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE--DGTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 90 ~~~l~-~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
+..|. + ...+.|.+.++........+.........|++.|....|+.... .+.|...++.....
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~------------ 549 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------ 549 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE------------
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce------------
Confidence 65444 4 45679999998755544444444456889999997555555442 36788888765321
Q ss_pred CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeec---CCcEEEEEEcCCCCEEE
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL---DTRLTCVAFDGTEDNIY 242 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~ 242 (343)
.......-.....|++++.+. .++++-...+.|...++........... -.....|++. +..|+
T Consensus 550 ----------~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lY 616 (791)
T 3m0c_C 550 ----------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVF 616 (791)
T ss_dssp ----------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEE
T ss_pred ----------EEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEE
Confidence 111122335688999997663 4555555678899999864443333322 1234566664 34555
Q ss_pred EE-cCCCcEEEEEeecc
Q psy10867 243 MG-TSEGVIKSFCLRQV 258 (343)
Q Consensus 243 ~~-~~d~~i~i~d~~~~ 258 (343)
.. ...+.|...|..++
T Consensus 617 wtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 617 WTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEETTTTEEEEEETTTC
T ss_pred EEECCCCEEEEEeCCCC
Confidence 54 45677777775443
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.45 E-value=0.00028 Score=55.52 Aligned_cols=223 Identities=9% Similarity=0.124 Sum_probs=142.5
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-ccceecccC----CcceEEEEECC
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-EKAQLRLIC----PGRISSMQASP 88 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~s~ 88 (343)
...+.|+|+++.+.++.+.-.+ .|.--.|-.+..+...... .|.-|+++.. .+.+.+..| ...|..-..++
T Consensus 86 g~~LQiFnletK~klks~~~~e--~VvfWkWis~~~L~lVT~t--aVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~ 161 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVALVTDN--AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA 161 (365)
T ss_dssp TTEEEEEETTTTEEEEEEECSS--CEEEEEECSSSEEEEEESS--EEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECT
T ss_pred CCeEEEechHHhhhhcceecCC--ccEEEEecCCCeEEEEcCC--cEEEEcccCCCCCceeeecchhcccceEEEEEECC
Confidence 4789999999999999988876 6666777666655555544 7999999753 333444332 35678888899
Q ss_pred CCCEEEE-e---c----CCeEEEEEccCCceEEEecccCCCeEEEEEec--CC-CEEEEecC---CCeEEEeecCccc-e
Q psy10867 89 DAAYIAV-S---I----ETKLHMWQISSGRLLATASSHYQPITIVKWSA--DS-NFIVTGGE---DGTICVWQLSRLI-C 153 (343)
Q Consensus 89 ~~~~l~~-~---~----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~l~s~~~---dg~i~iwd~~~~~-~ 153 (343)
+.++++. | . .|.+.+|..+. +..+.+++|......+.... .. +.++.+.. .+++.+-++.... .
T Consensus 162 ~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~ 240 (365)
T 2xzh_A 162 KQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG 240 (365)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTT
T ss_pred CCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCC
Confidence 9998884 3 2 36799999764 45667788865443333321 11 12333322 2578888875420 0
Q ss_pred eeeeecCCCCCCCCccccccceeeee---cccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcE
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVK---SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRL 229 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i 229 (343)
...+. .+..... +...+..-++.+++.. ..+..-+.-|.+++||++++.++..-+ ....|
T Consensus 241 ~~~f~--------------kk~vdi~fppea~~DFPVamqvs~ky--gviyviTK~G~ihlyDleTgt~i~~nrIS~d~i 304 (365)
T 2xzh_A 241 NQPFP--------------KKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNRISGETI 304 (365)
T ss_dssp CCCCC--------------CEEEEECCCTTCTTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCCcc--------------cccceeeCCccccCCceEEEEecccC--CEEEEEeCCcEEEEEEcccCcEEEEeccCCCce
Confidence 00000 0111111 1234556678888877 688889999999999999999988877 45556
Q ss_pred EEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
-..+.+.+..-++.-...|.|.-..++.
T Consensus 305 F~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 305 FVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred EEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 5555555555555556788777666654
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.45 E-value=0.00067 Score=59.74 Aligned_cols=181 Identities=10% Similarity=-0.064 Sum_probs=102.2
Q ss_pred CCeEEEEecCCceE-EEEEecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCC
Q psy10867 14 SGAISVWEPKGGTL-LMSYKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAA 91 (343)
Q Consensus 14 dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 91 (343)
.+.|..+++..... ...+...-. .+..+++.+ ++.+..+-...+.|.+.+++.................+++.|.+.
T Consensus 61 ~~~I~r~~~~g~~~~~~v~~~~~~-~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g 139 (619)
T 3s94_A 61 EEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG 139 (619)
T ss_dssp TTEEEEEEC-----CEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTT
T ss_pred CCeEEEEEccCCCceEEEEeCCCC-CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCC
Confidence 34555555543321 222232224 778999998 567777777778999999886543333323445577899988654
Q ss_pred -EEEEe--cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe-cCCCeEEEeecCccceeeeeecCCCCCCCC
Q psy10867 92 -YIAVS--IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPGSSGK 167 (343)
Q Consensus 92 -~l~~~--~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 167 (343)
++.+. ..+.|...+++...........-.....|++.+++..|+.+ ...+.|...|+........
T Consensus 140 ~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~----------- 208 (619)
T 3s94_A 140 FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV----------- 208 (619)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-------------
T ss_pred eEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE-----------
Confidence 44453 34678888876443333333334567899999866655544 4567888888865322110
Q ss_pred ccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceE
Q psy10867 168 GVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 220 (343)
..+.......+++..+ .++++-...+.|...|..+++..
T Consensus 209 -----------~~~~~~~P~gi~~~~~---~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 209 -----------VKGSLPHPFALTLFED---ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp ------------------CCCEEESSS---EEEEECTTTCSEEEEESSSCCCC
T ss_pred -----------EeCCCCCceEEEEeCC---EEEEecCCCCEEEEEECCCCccc
Confidence 0101112234555443 35555556677777776665543
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.00059 Score=57.77 Aligned_cols=233 Identities=8% Similarity=-0.067 Sum_probs=128.6
Q ss_pred CCeEEEEecCCceEEEEEecCC---CCcceEEEE-------eCCce-EEEEEcCCC------eEEEEeCCC-cccc----
Q psy10867 14 SGAISVWEPKGGTLLMSYKGAS---VLSPHSMCL-------LGNDY-VLGVEKGKP------MIQAWPVNS-QEKA---- 71 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~-~~~~~~~~~------~i~iw~~~~-~~~~---- 71 (343)
.+.|++.|..++.......... . .+..++| ++++. ++++...++ .+.+++... +...
T Consensus 161 ~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~ 239 (496)
T 3kya_A 161 HKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSD 239 (496)
T ss_dssp EEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred CCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence 3567777877666554443322 2 5889999 99987 555544431 255565333 2221
Q ss_pred -eecccCCcceEEEEECCC-CCEEEE-ecCCeEEEEEcc-------CCce-----------EEE-ec-ccCCCeEEEEEe
Q psy10867 72 -QLRLICPGRISSMQASPD-AAYIAV-SIETKLHMWQIS-------SGRL-----------LAT-AS-SHYQPITIVKWS 128 (343)
Q Consensus 72 -~~~~~~~~~v~~~~~s~~-~~~l~~-~~d~~i~v~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~ 128 (343)
..+.. -.....++++|+ +.++++ -.++.|..+|+. ++.. ... +. +.......|+|+
T Consensus 240 ~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~ 318 (496)
T 3kya_A 240 IQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH 318 (496)
T ss_dssp EEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC
T ss_pred ceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEc
Confidence 11211 123457788994 555555 356789999997 5543 112 21 223446799999
Q ss_pred cCCCE-EEEecCCCeEEEeecCccc--ee--eeeecCCCCCCCCccccccceeeeecccccceE-EEEee-------cCC
Q psy10867 129 ADSNF-IVTGGEDGTICVWQLSRLI--CK--QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT-HVTLS-------KLG 195 (343)
Q Consensus 129 ~~~~~-l~s~~~dg~i~iwd~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-------~~~ 195 (343)
|+++. +++-+..+.|+.++..... .. ..+.. ..+..+.. .+.. ....-.... .++.. +++
T Consensus 319 p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG-~~g~~G~~-DG~~-----~~a~f~~P~~gv~vd~~~~~~~~~g 391 (496)
T 3kya_A 319 PTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVG-GYKQSGYR-DDVG-----TEARMNNPCQGVFVKNPDYTGEEEY 391 (496)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEE-BTTBCCCB-CCBG-----GGCBCSSEEEEEEEECTTCCSSCCE
T ss_pred CCCCEEEEEeCCCCEEEEEecCCCcceecccEEecC-CCCCCccc-CCcc-----cccccCCCeEEEEEccccccccCCC
Confidence 99995 4444567889887654321 10 11110 00000000 0000 001112233 44444 344
Q ss_pred CceEEEEeeCCCeEEEEecCCCceEEEee-c------------------------CCcEEEEEEcCC-CCEEEEEcCCCc
Q psy10867 196 AKSRVASVSHDRTCKIFDLCTGEDLLSLI-L------------------------DTRLTCVAFDGT-EDNIYMGTSEGV 249 (343)
Q Consensus 196 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~------------------------~~~i~~~~~~~~-~~~l~~~~~d~~ 249 (343)
.++++-.....|+.++ .++. +.++. . -.....++++++ +.++++=..+..
T Consensus 392 --~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r 467 (496)
T 3kya_A 392 --DFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT 467 (496)
T ss_dssp --EEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred --eEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE
Confidence 6777777788999998 4564 33332 1 023678999997 655555566889
Q ss_pred EEEEEeeccc
Q psy10867 250 IKSFCLRQVP 259 (343)
Q Consensus 250 i~i~d~~~~~ 259 (343)
|+.+++....
T Consensus 468 Irki~~~~~~ 477 (496)
T 3kya_A 468 IRTISMEQEE 477 (496)
T ss_dssp EEEEEECCCC
T ss_pred EEEEECCCCc
Confidence 9999887643
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.42 E-value=0.00036 Score=55.31 Aligned_cols=206 Identities=10% Similarity=0.029 Sum_probs=126.2
Q ss_pred EecCCCCcceEEEEeC-CceEEEEEcCCCeEEEEeCCCcccceecccC-------CcceEEEEE---CCCCCEEEEec--
Q psy10867 31 YKGASVLSPHSMCLLG-NDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC-------PGRISSMQA---SPDAAYIAVSI-- 97 (343)
Q Consensus 31 ~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~---s~~~~~l~~~~-- 97 (343)
++.... -..+++|.+ ++.+.++.-..+.|..|+...+......... ...+..+.| .|+++++++..
T Consensus 8 ~~~~~~-yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 8 VKVKNL-TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp ECCTTC-CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred ecCccc-CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 333333 567899987 5777777767799999999865433332221 124689999 58888888533
Q ss_pred ------------CCeEEEEEcc---CCceEEEec--cc-----------CCCeEEEEEecCCCEEEEecCC-CeEEEeec
Q psy10867 98 ------------ETKLHMWQIS---SGRLLATAS--SH-----------YQPITIVKWSADSNFIVTGGED-GTICVWQL 148 (343)
Q Consensus 98 ------------d~~i~v~~~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~ 148 (343)
+..|..||+. +++.+.... .. ......++..++|+..++++.. +.|...+.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 5679999998 776654432 11 1247899999999999988887 88777776
Q ss_pred CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce--EEEe--e
Q psy10867 149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED--LLSL--I 224 (343)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~--~ 224 (343)
..... ..+. ............+.|++.|++ ..|+.....+.|..+|+.+... +..- .
T Consensus 167 dG~~~-~~~~----------------~~~~~~~~~~G~nGIv~~pdg--~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G 227 (334)
T 2p9w_A 167 DGKTV-STFA----------------WESGNGGQRPGYSGITFDPHS--NKLIAFGGPRALTAFDVSKPYAWPEPVKING 227 (334)
T ss_dssp TSCCE-EEEE----------------ECCCCSSSCCSCSEEEEETTT--TEEEEESSSSSEEEEECSSSSCCCEECEESS
T ss_pred CCCEE-eeee----------------ecCCCcccccCcceEEEeCCC--CEEEEEcCCCeEEEEcCCCCcceeecccccC
Confidence 65321 1110 000001122346789999999 5666665599999999885433 2111 0
Q ss_pred ---cCCcEEEE-EEcCCCCEEEEE-cCCCcEEEEEee
Q psy10867 225 ---LDTRLTCV-AFDGTEDNIYMG-TSEGVIKSFCLR 256 (343)
Q Consensus 225 ---~~~~i~~~-~~~~~~~~l~~~-~~d~~i~i~d~~ 256 (343)
.-.....+ ..-.+|+.|+++ ...+.+.+.+..
T Consensus 228 ~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 228 DFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWD 264 (334)
T ss_dssp CCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSS
T ss_pred CcccccCcccccccccCCEEEEEEcCCCCEEEEECCC
Confidence 11123333 333467774544 445555554433
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.38 E-value=0.00057 Score=55.78 Aligned_cols=233 Identities=12% Similarity=0.058 Sum_probs=125.4
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcc-cceec---ccCCcceEEEEECCC----CCEEEEec----C----CeE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQE-KAQLR---LICPGRISSMQASPD----AAYIAVSI----E----TKL 101 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~-~~~~~---~~~~~~v~~~~~s~~----~~~l~~~~----d----~~i 101 (343)
....++|.|+|+++++-.. |.|.+++. +++ .+..+ .........|+++|+ +.+.++.. + +.|
T Consensus 30 ~P~~ia~~pdG~l~V~e~~-g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERP-GRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEEETT-TEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCC-CEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 7789999999998888776 99999974 343 11111 122356889999997 44444422 3 578
Q ss_pred EEEEccCC--c---e--E-EEecc-cCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecCccceeeeeec
Q psy10867 102 HMWQISSG--R---L--L-ATASS-HYQPITIVKWSADSNFIVTGGED-------------GTICVWQLSRLICKQTVAF 159 (343)
Q Consensus 102 ~v~~~~~~--~---~--~-~~~~~-~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~ 159 (343)
..|+...+ . . + ..+.. .......++|.|||.+.++.+.. |.|..++..... .
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~-----p- 181 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP-----P- 181 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC-----C-
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC-----C-
Confidence 88887654 1 1 1 11221 11124579999999877765432 334444432210 0
Q ss_pred CCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEeeC-CC--eEEEEecCCCc-----------------
Q psy10867 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVSH-DR--TCKIFDLCTGE----------------- 218 (343)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~-d~--~i~~wd~~~~~----------------- 218 (343)
..+.. ........++. ....++|+| ++ .++++-.. ++ .|.+.. .+.
T Consensus 182 -----~~npf---~~~~i~a~G~r-np~Gla~d~~~g--~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~ 248 (354)
T 3a9g_A 182 -----ADNPF---PNSPIWSYGHR-NPQGIDWHRASG--VMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFV 248 (354)
T ss_dssp -----TTSSS---TTCCEEEECCS-CCCEEEECTTTC--CEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSC
T ss_pred -----CCCCC---CCCcEEEEccC-CcceEEEeCCCC--CEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCc
Confidence 00000 00111112332 346799999 55 44443222 21 233322 111
Q ss_pred -eEEEe-ecCCcEEEEEEc-------CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867 219 -DLLSL-ILDTRLTCVAFD-------GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289 (343)
Q Consensus 219 -~~~~~-~~~~~i~~~~~~-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 289 (343)
.+..+ ........++|. .++.++++....+.|...++......... ...+.+....+..+++.|
T Consensus 249 ~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~-------~~~~~~~~~rp~~v~~~p 321 (354)
T 3a9g_A 249 DPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKI-------STFFKNVFGRLRDVVIDD 321 (354)
T ss_dssp CCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEE-------EEECTTTSCCEEEEEECT
T ss_pred CCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccce-------eeeccCCCCCeeEEEECC
Confidence 22333 223457788884 46767777677788888888753221100 001112245688999999
Q ss_pred CCCEEEEEe
Q psy10867 290 TGITLLSSS 298 (343)
Q Consensus 290 ~~~~l~s~~ 298 (343)
||.++++..
T Consensus 322 DG~lyv~~~ 330 (354)
T 3a9g_A 322 DGGILISTS 330 (354)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEEe
Confidence 997666654
No 307
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.33 E-value=0.00081 Score=55.14 Aligned_cols=224 Identities=9% Similarity=0.119 Sum_probs=145.5
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCc-ccceecccC----CcceEEEEECC
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ-EKAQLRLIC----PGRISSMQASP 88 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~s~ 88 (343)
..++.|+|+++.+.++.+.-.+ .|.--.|-.+..+..+.. ..|.-|++++. .+.+.+..| ...|..-..++
T Consensus 85 g~~lQiFnle~K~klks~~~~e--~VvfWkWis~~~l~lVT~--taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~ 160 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVALVTD--NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA 160 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECSS--CCCEEEEEETTEEEEECS--SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT
T ss_pred CCeEEEEchHHhhhhcceecCC--CceEEEecCCCeEEEEcC--CeeEEecccCCCCchhheecchhcccceEEEEEECC
Confidence 4789999999999999988877 566666765555554443 47999999753 333444332 35688888899
Q ss_pred CCCEEEE-e---c----CCeEEEEEccCCceEEEecccCCCeEEEEEecC---CCEEEEecC---CCeEEEeecCccc-e
Q psy10867 89 DAAYIAV-S---I----ETKLHMWQISSGRLLATASSHYQPITIVKWSAD---SNFIVTGGE---DGTICVWQLSRLI-C 153 (343)
Q Consensus 89 ~~~~l~~-~---~----d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~---dg~i~iwd~~~~~-~ 153 (343)
+.++++. | . .|.+.+|..+.+ ..+.+++|......+....+ ...++.+.. .+.+.+-++.... .
T Consensus 161 ~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~ 239 (494)
T 1bpo_A 161 KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG 239 (494)
T ss_dssp TSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTT
T ss_pred CCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccC
Confidence 9998884 2 2 367999998644 45677888665444443211 123333333 2678888885430 0
Q ss_pred eeeeecCCCCCCCCccccccceeee---ecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcE
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHV---KSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRL 229 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i 229 (343)
...+. .+.... .....+..-++.+++.. ..+..-+.-|.+.+||++++.++..-+ ....|
T Consensus 240 ~~~f~--------------kk~vdv~fppe~~~DFPvamqvs~ky--gviyviTK~G~i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 240 NQPFP--------------KKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp CCCCC--------------CEEEECCCCTTSTTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCCcc--------------ceeeeeeCCcccccCceeEEEecccC--CEEEEEecCceEEEEecccceeeeeecccCCce
Confidence 00000 001111 11234556688888877 688889999999999999999988777 45566
Q ss_pred EEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 230 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 258 (343)
-..+.+....-++.....|.|.-..+...
T Consensus 304 F~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 304 FVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEecccCCCCcEEEEccCceEEEEEEccc
Confidence 66666666666666668888877766653
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.28 E-value=0.001 Score=54.28 Aligned_cols=239 Identities=8% Similarity=-0.036 Sum_probs=128.3
Q ss_pred CcceEEEEECCCCCEEEEecCCeEEEEEccCCc-eEEEec---ccCCCeEEEEEecC---CCEEEEecC----C----Ce
Q psy10867 78 PGRISSMQASPDAAYIAVSIETKLHMWQISSGR-LLATAS---SHYQPITIVKWSAD---SNFIVTGGE----D----GT 142 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~s~~~----d----g~ 142 (343)
-.....++|.|+|+++++..++.|++++ .+++ .+..+. ........|+++|+ +..|+.+.. + ..
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3456899999999988887789999997 4554 222221 12346889999997 444444332 2 56
Q ss_pred EEEeecCccc-eeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeC-------------CC
Q psy10867 143 ICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSH-------------DR 207 (343)
Q Consensus 143 i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~ 207 (343)
|..|+..... ...... ..+..+. ........++|.|++ .++++.+. .|
T Consensus 107 v~r~~~~~~~~~~~~~~---------------~l~~~~~~~~~h~~~~l~~~pDG--~Lyvt~G~~~~~~~~~d~~~~~G 169 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVK---------------TLIDGIPGAYIHNGGRIRFGPDG--MLYITTGDAADPRLAQDLSSLAG 169 (354)
T ss_dssp EEEEEECSSSCCEEEEE---------------EEEEEEECCSSCCCCCEEECTTS--CEEEECCCTTCGGGGTCTTCCSS
T ss_pred EEEEEECCCCcCcCccE---------------EEEEcCCCCCCcCCceEEECCCC--cEEEEECCCCCCccccCCCCCCe
Confidence 7777765431 000000 0111111 111234679999999 56665432 24
Q ss_pred eEEEEecCCC---------ceEEEeecCCcEEEEEEcC-CCCEEEEEcCCC---cEEEEEeecccccccccc--------
Q psy10867 208 TCKIFDLCTG---------EDLLSLILDTRLTCVAFDG-TEDNIYMGTSEG---VIKSFCLRQVPRTRDHHI-------- 266 (343)
Q Consensus 208 ~i~~wd~~~~---------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~-------- 266 (343)
.|.-++.... ..+... .......++|+| ++.++++-...+ .|.+. ..... .-+..
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~n-yGwp~~~g~~~~~ 245 (354)
T 3a9g_A 170 KILRVDEEGRPPADNPFPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGN-YGWPLATGKAGRG 245 (354)
T ss_dssp EEEEECTTSCCCTTSSSTTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCB-CCTTTCCSCCCCT
T ss_pred EEEEEcCCCCCCCCCCCCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCc-CCCCcccCCCCCC
Confidence 5666665321 112221 223456799999 555444432222 23332 21110 00000
Q ss_pred cCCCCCCccccccCcEEEEEE-------ccCCCEEEEEeCCCcEEEEecccc-eee--eec-c-cCCceEEEEEccCCCe
Q psy10867 267 QDSTSNPDFIGHEKQVTSLSC-------SITGITLLSSSADETLKIWHTISR-QCL--RTI-Q-HKGPVLGAFLGLLPPA 334 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~s~~~dg~i~iwd~~~~-~~~--~~~-~-~~~~v~~~~~sp~~~~ 334 (343)
....++..+......+..++| ..+|+++++.-..+.|...++... +.. ..+ . ....+..+++.|||..
T Consensus 246 ~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~l 325 (354)
T 3a9g_A 246 EFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGI 325 (354)
T ss_dssp TSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCE
T ss_pred CCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcE
Confidence 001122222112345788888 356777777767778888888753 322 222 2 2467899999999976
Q ss_pred eeec
Q psy10867 335 IHDY 338 (343)
Q Consensus 335 l~~~ 338 (343)
.++.
T Consensus 326 yv~~ 329 (354)
T 3a9g_A 326 LIST 329 (354)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.25 E-value=0.00014 Score=57.70 Aligned_cols=164 Identities=6% Similarity=0.093 Sum_probs=104.3
Q ss_pred eEEEEECC-CCCEEEEe-cCCeEEEEEccCCceEEE-ecc----cCC--CeEEEEE---ecCCCEEEEec----------
Q psy10867 81 ISSMQASP-DAAYIAVS-IETKLHMWQISSGRLLAT-ASS----HYQ--PITIVKW---SADSNFIVTGG---------- 138 (343)
Q Consensus 81 v~~~~~s~-~~~~l~~~-~d~~i~v~~~~~~~~~~~-~~~----~~~--~v~~~~~---~~~~~~l~s~~---------- 138 (343)
-.+++|.+ ++.+++++ ..++|..|+...+..... +.+ ... .+..+.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 45678876 45555665 689999999876644333 222 111 3578999 58877776533
Q ss_pred ---CCCeEEEeecC---ccceeeeeecCCCCCCCCccccccceeeeecc-cccceEEEEeecCCCceEEEEeeCC-CeEE
Q psy10867 139 ---EDGTICVWQLS---RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ-HSLPVTHVTLSKLGAKSRVASVSHD-RTCK 210 (343)
Q Consensus 139 ---~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d-~~i~ 210 (343)
.+..|..+|+. +++......+.. ..+..+.+.+ .......+++.++| +..++++.. +.|.
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~----------~~~~~~~~~g~~~~~~nDvavD~~G--naYVt~s~~~~~I~ 162 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEK----------VQDEFEKKAGKRPFGVVQSAQDRDG--NSYVAFALGMPAIA 162 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHH----------HHHHHHHHHSSCCEEEEEEEECTTS--CEEEEEEESSCEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCcc----------ccccccccccccccCCceeEECCCC--CEEEeCCCCCCeEE
Confidence 25779999998 654443321000 0000000000 11347899999999 788888888 8888
Q ss_pred EEecCCCceEEEee--c-----CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 211 IFDLCTGEDLLSLI--L-----DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 211 ~wd~~~~~~~~~~~--~-----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
..+.. ++.+..+. . ....+.|+++|+++.|++....|.+..+|+..
T Consensus 163 rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 163 RVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 88854 33333322 1 11367899999999999987799999999884
No 310
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.15 E-value=0.0016 Score=55.11 Aligned_cols=131 Identities=4% Similarity=-0.103 Sum_probs=82.2
Q ss_pred eEEEEecCC----C-ceEEEeecCCcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccc-cCCCC-CCcccccc
Q psy10867 208 TCKIFDLCT----G-EDLLSLILDTRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHI-QDSTS-NPDFIGHE 279 (343)
Q Consensus 208 ~i~~wd~~~----~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~-~~~~~~~~ 279 (343)
.+.+.|.+. + .....+..+.....+..+|||+++++++. +.++.++|++.......-.+ ..... ..... -.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 366677665 2 23444456677788999999999988665 88999999986433211000 00000 01111 23
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEecccc----------eeeeecccCCceEEEEE------ccCCCeeeecc
Q psy10867 280 KQVTSLSCSITGITLLSSSADETLKIWHTISR----------QCLRTIQHKGPVLGAFL------GLLPPAIHDYD 339 (343)
Q Consensus 280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~~~~~v~~~~~------sp~~~~l~~~~ 339 (343)
-.....+|.++|....+.--|..|--|++... ..+..+.....+-.+.- .|||++|++.+
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 45678899999966667778999999999764 45555652233344433 68888888753
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.07 E-value=0.003 Score=51.53 Aligned_cols=239 Identities=10% Similarity=0.071 Sum_probs=122.4
Q ss_pred cceEEEEeCCce-EEEEEcCCCeEEEEeCCCccc--ce----ecccCCcceEEEEECCC----CCEEEE-ec-------C
Q psy10867 38 SPHSMCLLGNDY-VLGVEKGKPMIQAWPVNSQEK--AQ----LRLICPGRISSMQASPD----AAYIAV-SI-------E 98 (343)
Q Consensus 38 ~v~~~~~~~~~~-~~~~~~~~~~i~iw~~~~~~~--~~----~~~~~~~~v~~~~~s~~----~~~l~~-~~-------d 98 (343)
....|+|.|+|+ ++++... |.|++++...... +. ...........++|+|+ +.+.++ .. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 678999999999 8877765 8999998543321 11 11122346789999995 444444 22 2
Q ss_pred CeEEEEEccCC--c--eEE----Eecc---cCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecCcccee
Q psy10867 99 TKLHMWQISSG--R--LLA----TASS---HYQPITIVKWSADSNFIVTGGED-------------GTICVWQLSRLICK 154 (343)
Q Consensus 99 ~~i~v~~~~~~--~--~~~----~~~~---~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~ 154 (343)
..|..+++..+ . ... .+.. ....-..|+|.|||.+.++.+.. |.|.-++.....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~-- 175 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI-- 175 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC--
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC--
Confidence 35767776533 1 111 1111 11123579999999766665432 345555543210
Q ss_pred eeeecCCCCCCCCccccccceeeeecccccceEEEEeec-CCCceEEEEee-CCCeEEEEecCCC---------------
Q psy10867 155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK-LGAKSRVASVS-HDRTCKIFDLCTG--------------- 217 (343)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~-~d~~i~~wd~~~~--------------- 217 (343)
....+.... ......+ .-.++ .....++|.| .+ .++++-. .++.=.|.-+..+
T Consensus 176 ---p~~npf~~~---~~~~~~i-~a~G~-rnp~gl~~d~~~g--~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~ 245 (353)
T 2g8s_A 176 ---PDDNPFIKE---SGVRAEI-WSYGI-RNPQGMAMNPWSN--ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYS 245 (353)
T ss_dssp ---CTTCTTTTS---TTSCTTE-EEECC-SEEEEEEEETTTT--EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTT
T ss_pred ---CCCCCCcCC---CCCCccE-EEEcC-cCccceEEECCCC--CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCC
Confidence 000000000 0000011 11223 3467899999 55 4444321 1111122111111
Q ss_pred ----------------ceEEEeecCCcEEEEEEcC-------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCc
Q psy10867 218 ----------------EDLLSLILDTRLTCVAFDG-------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPD 274 (343)
Q Consensus 218 ----------------~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 274 (343)
..+..+.+......+.|.. +++++++....+.|...++......... ..
T Consensus 246 ~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~--------~~ 317 (353)
T 2g8s_A 246 GFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDG--------RI 317 (353)
T ss_dssp SSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEE--------EE
T ss_pred CCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeE--------Ec
Confidence 1122233344577788864 4667777777888888888743211110 01
Q ss_pred cccccCcEEEEEEccCCCEEEEE
Q psy10867 275 FIGHEKQVTSLSCSITGITLLSS 297 (343)
Q Consensus 275 ~~~~~~~v~~~~~s~~~~~l~s~ 297 (343)
+......+..+++.|||.++++.
T Consensus 318 ~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 318 LTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp SGGGCCCEEEEEECTTSCEEEEE
T ss_pred ccCCCCceeEEEECCCCcEEEEE
Confidence 12223578999999999866643
No 312
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.03 E-value=0.0017 Score=61.27 Aligned_cols=219 Identities=10% Similarity=0.149 Sum_probs=134.2
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI 93 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 93 (343)
...|.|-|+..+..+.+-.- .--+.-.+|..+++|.-.. .++.|+|+++.+.++...- ...|.-=.|- +.+.|
T Consensus 47 ~~~vvIidl~~~~~~~rrpi----~AdsAIMnP~~~iiALrag-~~lQiFnl~~k~klks~~~-~e~VvfWkWi-s~~~l 119 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPI----SADSAIMNPASKVIALKAG-KTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTV 119 (1630)
T ss_pred CceEEEEECCCCCCcccccc----cchhhccCCCcceEEEecC-CeEEEeehHHhhhhccccc-CCCceEEEec-CCCee
Confidence 34677777766543322111 1123456788888888776 8999999999887765533 3456666776 34456
Q ss_pred EEecCCeEEEEEccCC-ceEEEeccc----CCCeEEEEEecCCCEEEEec-------CCCeEEEeecCccceeeeeecCC
Q psy10867 94 AVSIETKLHMWQISSG-RLLATASSH----YQPITIVKWSADSNFIVTGG-------EDGTICVWQLSRLICKQTVAFGI 161 (343)
Q Consensus 94 ~~~~d~~i~v~~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~ 161 (343)
+--.+..|+.|++... .+.+.+..| ...|..-..+++.++++..| -.|.+.+|..+..
T Consensus 120 ~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---------- 189 (1630)
T 1xi4_A 120 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------- 189 (1630)
T ss_pred EEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----------
Confidence 6556788999999643 444445444 34566666778888776433 3577888888764
Q ss_pred CCCCCCccccccceeeeecccccceEEEEeecCCCc-eEEEEeeC---CCeEEEEecCCC---ceEE-----Eeec----
Q psy10867 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK-SRVASVSH---DRTCKIFDLCTG---EDLL-----SLIL---- 225 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~---d~~i~~wd~~~~---~~~~-----~~~~---- 225 (343)
..+.+.+|......+....+... .+++.+.. .+.+++-++... .... .+..
T Consensus 190 -------------~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~ 256 (1630)
T 1xi4_A 190 -------------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (1630)
T ss_pred -------------cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence 34455566555544444322111 23332222 268888887543 1110 0111
Q ss_pred -CCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccc
Q psy10867 226 -DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR 262 (343)
Q Consensus 226 -~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 262 (343)
..-..++..++....++.-+.-|.|+++|+.++....
T Consensus 257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred ccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 1225567888888889999999999999999865543
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.03 E-value=0.002 Score=52.83 Aligned_cols=154 Identities=13% Similarity=0.068 Sum_probs=98.5
Q ss_pred EeCCceEEEEEcCCCeEEEEeCCCcccceecccC----CcceEEEEECCCCCEEEEecCCeEEEEEccCCc---------
Q psy10867 44 LLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLIC----PGRISSMQASPDAAYIAVSIETKLHMWQISSGR--------- 110 (343)
Q Consensus 44 ~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~--------- 110 (343)
...+|.-++.+.+ +.||.-++.....-+.+... -+.|..+..+|+|.+||...+..|.|..+..+.
T Consensus 28 ~~~n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 28 SSQNGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp EETTTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHH
T ss_pred EEcCCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccc
Confidence 3445555555555 68888787744333333322 236788999999999999888899999987331
Q ss_pred ---eEEEecc------cCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee
Q psy10867 111 ---LLATASS------HYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178 (343)
Q Consensus 111 ---~~~~~~~------~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (343)
..+.+.- ...+|..+.|+| .+..|++-..|+.|++||+........ .+.. . .....
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k----------~-~~~fg 174 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNK----------P-NNSFG 174 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESC----------C-CSEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhc----------c-ccccC
Confidence 1122221 246799999999 456899999999999999987321111 1100 0 01112
Q ss_pred ecccccceEEEEeecCCCceEEEE--eeCCCeEEEE
Q psy10867 179 KSQHSLPVTHVTLSKLGAKSRVAS--VSHDRTCKIF 212 (343)
Q Consensus 179 ~~~~~~~v~~~~~~~~~~~~~l~~--~~~d~~i~~w 212 (343)
.......|.+++|.+++ -.|.. .+..|.|+-.
T Consensus 175 ~d~~~~ev~S~~Fg~~~--lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 175 LDARVNDITDLEFSKDG--LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCSSCCCEEEEEECTTS--SCEEEEECTTSCEEEEE
T ss_pred CCcccceEEEEEEcCCC--cEEEEEecCCCCCEEEE
Confidence 22344678899999976 55555 4577887653
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.00 E-value=0.0029 Score=50.23 Aligned_cols=215 Identities=11% Similarity=0.083 Sum_probs=105.5
Q ss_pred CeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecC-----CeEEEEEccCCc---eEEE--ecccCCCeEE
Q psy10867 58 PMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIE-----TKLHMWQISSGR---LLAT--ASSHYQPITI 124 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~---~~~~--~~~~~~~v~~ 124 (343)
..+.+||..+.+...... ........+. .++.+++. |.+ ..+.+||+.+.+ -... +.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 368889988766443221 1111122222 25555554 433 469999998876 3332 2211112222
Q ss_pred EEEecCCCEEEEecCC-----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceE
Q psy10867 125 VKWSADSNFIVTGGED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR 199 (343)
Q Consensus 125 ~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 199 (343)
+.+ +++.++.|+.+ ..+.+||+.+.+-.. +..+......- +++.. ++ .+
T Consensus 109 ~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--------------------~~~~p~~r~~~-~~~~~-~~--~i 162 (301)
T 2vpj_A 109 TTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM--------------------LGDMQTAREGA-GLVVA-SG--VI 162 (301)
T ss_dssp EEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE--------------------EEECSSCCBSC-EEEEE-TT--EE
T ss_pred EEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEE--------------------CCCCCCCcccc-eEEEE-CC--EE
Confidence 222 67777777653 357888887653221 11111111111 12222 44 67
Q ss_pred EEEeeCC-----CeEEEEecCCCceEEEeecCCc--EEEEEEcCCCCEEEEEcCC-----CcEEEEEeeccccccccccc
Q psy10867 200 VASVSHD-----RTCKIFDLCTGEDLLSLILDTR--LTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQ 267 (343)
Q Consensus 200 l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~ 267 (343)
++.|+.+ ..+.+||+.+.+-...-..+.+ -.+++. -+++.++.|+.+ ..+.+||+.+..=..
T Consensus 163 yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~----- 236 (301)
T 2vpj_A 163 YCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT----- 236 (301)
T ss_dssp EEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE-----
T ss_pred EEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEE-----
Confidence 7777654 4588899877654332221111 112222 246666777654 468888876532111
Q ss_pred CCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEecccce
Q psy10867 268 DSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTISRQ 312 (343)
Q Consensus 268 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 312 (343)
+..+.........+. -++++++.|+.+ ..+.+||+++.+
T Consensus 237 ----~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 237 ----VTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ----ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ----CCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 111111111112222 267777787765 357888887654
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.98 E-value=0.0044 Score=50.53 Aligned_cols=240 Identities=9% Similarity=-0.038 Sum_probs=126.2
Q ss_pred cceEEEEECCCCC-EEEEecCCeEEEEEccCCceEEE---e----cccCCCeEEEEEecC---CCEEEEec-C-------
Q psy10867 79 GRISSMQASPDAA-YIAVSIETKLHMWQISSGRLLAT---A----SSHYQPITIVKWSAD---SNFIVTGG-E------- 139 (343)
Q Consensus 79 ~~v~~~~~s~~~~-~l~~~~d~~i~v~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~l~s~~-~------- 139 (343)
.....|+|.|+|+ ++++...+.|++++. ++..... + .........|+++|+ +..|+... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3567999999999 888878899999985 3332111 1 112345789999995 44444332 2
Q ss_pred CCeEEEeecCccc-eeeeeecCCCCCCCCccccccceeeeec---ccccceEEEEeecCCCceEEEEeeC----------
Q psy10867 140 DGTICVWQLSRLI-CKQTVAFGIPGSSGKGVTGLTEPLHVKS---QHSLPVTHVTLSKLGAKSRVASVSH---------- 205 (343)
Q Consensus 140 dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~---------- 205 (343)
...|..+++.... ...... ..+..+. ........++|.|++ .++++.+.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~---------------~i~~~~p~~~~~~h~~~~l~~~pdG--~Lyv~~Gd~~~~~~~q~~ 159 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFR---------------TVFRQMPKLSTGNHFGGRLVFDGKG--YLFIALGENNQRPTAQDL 159 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEE---------------EEEECSSCCBSSSCCCCCEEECSSS--EEEEEECCTTCGGGGGCT
T ss_pred eeEEEEEEECCCCCCCCceE---------------EEEEECCCCCCCcccCccEEECCCC--cEEEEECCCCCCCccCCC
Confidence 2346656554321 000000 0111111 111123579999998 56555433
Q ss_pred ---CCeEEEEecCCCc------------eEEEee-cCCcEEEEEEcCCCCEEEEEcCC--CcEEEEEeecccccc----c
Q psy10867 206 ---DRTCKIFDLCTGE------------DLLSLI-LDTRLTCVAFDGTEDNIYMGTSE--GVIKSFCLRQVPRTR----D 263 (343)
Q Consensus 206 ---d~~i~~wd~~~~~------------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~----~ 263 (343)
.|.|.-++....- ....+. .......++|+|....|+++... +.=.|.-+.....-. .
T Consensus 160 ~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~ 239 (353)
T 2g8s_A 160 DKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLAT 239 (353)
T ss_dssp TSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBC
T ss_pred CCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCcc
Confidence 2467777754320 111122 23457889999954455554332 111222121111100 0
Q ss_pred ----c---ccc---------CCCCCCccccccCcEEEEEEcc-------CCCEEEEEeCCCcEEEEecccceeeee---c
Q psy10867 264 ----H---HIQ---------DSTSNPDFIGHEKQVTSLSCSI-------TGITLLSSSADETLKIWHTISRQCLRT---I 317 (343)
Q Consensus 264 ----~---~~~---------~~~~~~~~~~~~~~v~~~~~s~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~---~ 317 (343)
+ .+. ...++..+. +...+..++|.. +|+++++.-..+.|...++..++.... +
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~ 318 (353)
T 2g8s_A 240 WGINYSGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRIL 318 (353)
T ss_dssp SSBCTTSSCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEES
T ss_pred CCCCCCCCccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcc
Confidence 0 000 001112222 234577788863 467777777778888888876554332 2
Q ss_pred c-cCCceEEEEEccCCCeeee
Q psy10867 318 Q-HKGPVLGAFLGLLPPAIHD 337 (343)
Q Consensus 318 ~-~~~~v~~~~~sp~~~~l~~ 337 (343)
. ....+..+++.|||...++
T Consensus 319 ~~~~~rp~~v~~~pdG~lyv~ 339 (353)
T 2g8s_A 319 TDRGQRIRDVRTGPDGYLYVL 339 (353)
T ss_dssp GGGCCCEEEEEECTTSCEEEE
T ss_pred cCCCCceeEEEECCCCcEEEE
Confidence 2 3457999999999987665
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.97 E-value=0.0045 Score=50.16 Aligned_cols=184 Identities=11% Similarity=0.075 Sum_probs=111.2
Q ss_pred cceEEEEeCCceEEEEE------------cCCCeEEEEeCCCc--cccee-ccc-----CCcceEEEEECC--CCC--EE
Q psy10867 38 SPHSMCLLGNDYVLGVE------------KGKPMIQAWPVNSQ--EKAQL-RLI-----CPGRISSMQASP--DAA--YI 93 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~------------~~~~~i~iw~~~~~--~~~~~-~~~-----~~~~v~~~~~s~--~~~--~l 93 (343)
..-.++..|+|.+++++ ..+|.|.++|.++. +.... ..+ .......+.+.+ ++. ++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 55678888999887776 25699999998742 22211 111 223567777755 453 44
Q ss_pred EEe---cCCeEEEEEccCCc-e---EEEeccc-CCCeEEEEEecCCCEEEEecC-----------------CCeEEEeec
Q psy10867 94 AVS---IETKLHMWQISSGR-L---LATASSH-YQPITIVKWSADSNFIVTGGE-----------------DGTICVWQL 148 (343)
Q Consensus 94 ~~~---~d~~i~v~~~~~~~-~---~~~~~~~-~~~v~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~ 148 (343)
++. .+..|.+|+++.+. . +..+.+. -...+.+.+.++|.+.++... .|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 552 25688888876542 2 2333332 245789999999987776541 233444443
Q ss_pred CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC-Cce--EEEeec
Q psy10867 149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-GED--LLSLIL 225 (343)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~--~~~~~~ 225 (343)
.+ ...+...-...+.++|+|+++ .+.++-+..+.|..|++.. ++. ...+..
T Consensus 211 ~~-------------------------~~~~~~~l~~pNGia~spDg~-~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~ 264 (355)
T 3sre_A 211 ND-------------------------VRVVAEGFDFANGINISPDGK-YVYIAELLAHKIHVYEKHANWTLTPLRVLSF 264 (355)
T ss_dssp TC-------------------------CEEEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEC
T ss_pred Ce-------------------------EEEeecCCcccCcceECCCCC-EEEEEeCCCCeEEEEEECCCCcEecCEEEeC
Confidence 21 111222335678999999984 4445555678999999863 332 223344
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCC
Q psy10867 226 DTRLTCVAFDG-TEDNIYMGTSE 247 (343)
Q Consensus 226 ~~~i~~~~~~~-~~~~l~~~~~d 247 (343)
....-.+++++ +|++.+++..+
T Consensus 265 ~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 265 DTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp SSEEEEEEECTTTCCEEEEEESC
T ss_pred CCCCceEEEeCCCCcEEEEecCC
Confidence 66678899999 58877765433
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.0019 Score=51.81 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=73.0
Q ss_pred cceEEEecCCCCeEEEEecCCceEEEEEecCC-CCcceEEEEe---CCceEEEEE-cCCCeEEEEeCCCcccceecc---
Q psy10867 4 LNEVAFSYDGSGAISVWEPKGGTLLMSYKGAS-VLSPHSMCLL---GNDYVLGVE-KGKPMIQAWPVNSQEKAQLRL--- 75 (343)
Q Consensus 4 v~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~---~~~~~~~~~-~~~~~i~iw~~~~~~~~~~~~--- 75 (343)
+..++|.++.||.|.-.|..+|+.+.+++... . ++....-. .++..++.. ..||.|..++..++.......
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~-p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQ-PLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSC-CSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccC-CcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 56788999999999999999999999988751 1 22221100 133455443 466889888888775432111
Q ss_pred -cCCcceEE---EEE------CCCCCEEEEecCCeEEEEEccCCceEEEecc
Q psy10867 76 -ICPGRISS---MQA------SPDAAYIAVSIETKLHMWQISSGRLLATASS 117 (343)
Q Consensus 76 -~~~~~v~~---~~~------s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~ 117 (343)
....++.. ... +.++..++.+.++.+...|+.+|+.+..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 11122221 001 2356666678999999999999999988863
No 318
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.92 E-value=0.011 Score=55.99 Aligned_cols=216 Identities=9% Similarity=0.066 Sum_probs=132.4
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEe---CC-ceEEEEEc----------CCCeEEEEeCCCccccee-cccCCc
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLL---GN-DYVLGVEK----------GKPMIQAWPVNSQEKAQL-RLICPG 79 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~---~~-~~~~~~~~----------~~~~i~iw~~~~~~~~~~-~~~~~~ 79 (343)
+.|++.|..+.+.+..++-..+-.+.+++.- .+ ..+++.|. ..|.|.+|++..++.... ....++
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 5689999988888887776554356666543 22 35666654 247899999874433211 124467
Q ss_pred ceEEEEECCCCCEEEEecCCeEEEEEccCCceEE-EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeee
Q psy10867 80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLA-TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVA 158 (343)
Q Consensus 80 ~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 158 (343)
+|++++-- +| +|+++....|++|++...+.+. ....+. .|..+.....+++++.|..-..|.+...+.... .+
T Consensus 887 ~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~--~L- 960 (1158)
T 3ei3_A 887 AVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--NF- 960 (1158)
T ss_dssp CEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTT--EE-
T ss_pred cCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCC--eE-
Confidence 88888744 45 5666677999999998765444 121122 233333333577888888777777665432210 00
Q ss_pred cCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ce---EEEeecCCc
Q psy10867 159 FGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------ED---LLSLILDTR 228 (343)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~---~~~~~~~~~ 228 (343)
...........++++.+-.++ .++.+..+|.+.++..... +. ...+.....
T Consensus 961 ----------------~~~a~D~~~~~vta~~~ld~~---t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~ 1021 (1158)
T 3ei3_A 961 ----------------EEIARDFNPNWMSAVEILDDD---NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEF 1021 (1158)
T ss_dssp ----------------EEEEECCSCBCEEEEEEEETT---EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSC
T ss_pred ----------------EEEEeecccccEEEEEEEccC---cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCc
Confidence 111223456678888888765 6777899999999865431 11 233445667
Q ss_pred EEEEEE---cCC---------CCEEEEEcCCCcEEEEEe
Q psy10867 229 LTCVAF---DGT---------EDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 229 i~~~~~---~~~---------~~~l~~~~~d~~i~i~d~ 255 (343)
++++.- .+. ...++.++.+|.|.+.-.
T Consensus 1022 vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~p 1060 (1158)
T 3ei3_A 1022 VNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTS 1060 (1158)
T ss_dssp EEEEEECCSCCC-------CEEEEEEEEETTSCEEEEEE
T ss_pred EeeEEeeeeecCCCccccccccceEEEEecCCEEEEEEE
Confidence 877763 332 235777888999887643
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.87 E-value=0.0043 Score=49.30 Aligned_cols=213 Identities=8% Similarity=0.002 Sum_probs=103.4
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcc---cceecc--cCCcceEEE
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQE---KAQLRL--ICPGRISSM 84 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~---~~~~~~--~~~~~v~~~ 84 (343)
..+.++|+.+.+-...-.......-.+++.. ++.+++.|..+ ..+.+||..+.+ ...... ........+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 4788999887654332111111022333333 45555555432 368899988776 332211 111122222
Q ss_pred EECCCCCEEEE-ec-----CCeEEEEEccCCceEE--EecccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCcc
Q psy10867 85 QASPDAAYIAV-SI-----ETKLHMWQISSGRLLA--TASSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSRL 151 (343)
Q Consensus 85 ~~s~~~~~l~~-~~-----d~~i~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~ 151 (343)
.+ ++++++. |. ...+.+||+.+.+-.. .+.........+. .+++.++.|+.+ ..+.+||+.+.
T Consensus 110 ~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 110 TL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22 5666665 33 2469999988775433 2221111122222 267777777754 35788888775
Q ss_pred ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeecC
Q psy10867 152 ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLILD 226 (343)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~ 226 (343)
.-... ..+.........+. . ++ .+++.|+.+ ..+.+||+.+.+-...-..+
T Consensus 186 ~W~~~--------------------~~~p~~r~~~~~~~-~-~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 186 HWTNV--------------------TPMATKRSGAGVAL-L-ND--HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EEEEE--------------------CCCSSCCBSCEEEE-E-TT--EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred cEEeC--------------------CCCCcccccceEEE-E-CC--EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 32211 11111111111222 2 34 677777764 46889998876543322211
Q ss_pred --CcEEEEEEcCCCCEEEEEcCCC-----cEEEEEeec
Q psy10867 227 --TRLTCVAFDGTEDNIYMGTSEG-----VIKSFCLRQ 257 (343)
Q Consensus 227 --~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~ 257 (343)
..-.+++.. +++.++.|+.++ .+.+||+.+
T Consensus 242 ~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 242 TPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCC
Confidence 111122222 566666666543 455666543
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.85 E-value=0.0029 Score=51.92 Aligned_cols=171 Identities=11% Similarity=0.120 Sum_probs=101.8
Q ss_pred CCCCCEEEEecCCeEEEEEccCCceEEEeccc----CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCC
Q psy10867 87 SPDAAYIAVSIETKLHMWQISSGRLLATASSH----YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP 162 (343)
Q Consensus 87 s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 162 (343)
..+|.-++...++.||.-++..+..-+.+... -..+..+..+|+|++|+..+. ..|.|-.+..+..
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~--------- 98 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYS--------- 98 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCS---------
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccc---------
Confidence 34677777777888998888755433444322 235788999999999998865 5788888764210
Q ss_pred CCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCC---CC
Q psy10867 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGT---ED 239 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~---~~ 239 (343)
... + ..+ ..-=.++-|.+...+ .....+|..+.|+|- +.
T Consensus 99 --------------------~~~---------~--~~~---~~~~q~~ty~l~~~~----~~~~s~I~qVlWHPl~~~ds 140 (452)
T 3pbp_A 99 --------------------NVE---------D--VSI---QDAFQIFHYSIDEEE----VGPKSSIKKVLFHPKSYRDS 140 (452)
T ss_dssp --------------------CCC---------C--HHH---HHTTEEEEEEGGGCC------CCCCEEEEEECTTBGGGC
T ss_pred --------------------cCc---------c--ccc---ccccceeEEEcCCcc----cCCCCceeEEEeccccCCCC
Confidence 000 0 000 000113334443211 124678999999995 56
Q ss_pred EEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEe--CCCcEEEE
Q psy10867 240 NIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS--ADETLKIW 306 (343)
Q Consensus 240 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iw 306 (343)
.|++-..|+.|++||+........ .+........+......|.+++|.+++-.|...+ ..|.|+-.
T Consensus 141 ~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 141 CIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred eEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 899999999999999986221111 1111111112223336788999999876666544 77776543
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.83 E-value=0.0072 Score=48.11 Aligned_cols=225 Identities=7% Similarity=0.057 Sum_probs=111.0
Q ss_pred ceEEEEEcC--CCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecC----CeEEEEEccCCceEEE--ec
Q psy10867 48 DYVLGVEKG--KPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIE----TKLHMWQISSGRLLAT--AS 116 (343)
Q Consensus 48 ~~~~~~~~~--~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d----~~i~v~~~~~~~~~~~--~~ 116 (343)
+.+++.|.. ...+.+||..+.+...... ........+. .++.+++. |.+ ..+.+||+.+++-... +.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 344544432 2578899988766543221 1111222222 25555554 433 5799999988754332 22
Q ss_pred ccCCCeEEEEEecCCCEEEEecCC------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEE
Q psy10867 117 SHYQPITIVKWSADSNFIVTGGED------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT 190 (343)
Q Consensus 117 ~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 190 (343)
........+.+ +++.++.|+.+ ..+.+||+.+..-... ..+......- +++
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~--------------------~~~p~~r~~~-~~~ 146 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK--------------------PSMLTQRCSH-GMV 146 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE--------------------CCCSSCCBSC-EEE
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC--------------------CCCcCCccee-EEE
Confidence 11112222222 67777777754 4588888877532211 0111111111 112
Q ss_pred eecCCCceEEEEeeC---------CCeEEEEecCCCceEEEeecCC--cEEEEEEcCCCCEEEEEcCC-----CcEEEEE
Q psy10867 191 LSKLGAKSRVASVSH---------DRTCKIFDLCTGEDLLSLILDT--RLTCVAFDGTEDNIYMGTSE-----GVIKSFC 254 (343)
Q Consensus 191 ~~~~~~~~~l~~~~~---------d~~i~~wd~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d-----~~i~i~d 254 (343)
. -++ .+++.|+. -..+.+||+.+.+-...-.... .-.+++.. +++.++.|+.+ ..+.+||
T Consensus 147 ~-~~~--~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd 222 (306)
T 3ii7_A 147 E-ANG--LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYD 222 (306)
T ss_dssp E-ETT--EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEE
T ss_pred E-ECC--EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEee
Confidence 2 244 56666654 3458899988764332222111 11122222 56666666653 3577888
Q ss_pred eecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEecccce
Q psy10867 255 LRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTISRQ 312 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 312 (343)
+.+..=.. +..+.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 223 ~~~~~W~~---------~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 223 IKLNEWKM---------VSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTTTEEEE---------CCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCcEEE---------CCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 76532110 1111111122222333 67778888754 468889987754
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.79 E-value=0.0043 Score=45.97 Aligned_cols=133 Identities=8% Similarity=-0.052 Sum_probs=81.4
Q ss_pred cceEEEecCCCCeEEEEecCCce------EEEEEecC-CCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc
Q psy10867 4 LNEVAFSYDGSGAISVWEPKGGT------LLMSYKGA-SVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI 76 (343)
Q Consensus 4 v~~~~~s~~~dg~i~iwd~~~~~------~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~ 76 (343)
-+.|++.-+.| +++.=...++. ...++-.. =. .+..++|+|+|.+.++ .. |.+.-.+..+......+ .
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~-~~~~laf~P~G~LYaV-~~-G~Ly~~~~~t~~~~~W~-~ 77 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWS-NFKFLFLSPGGELYGV-LN-DKIYKGTPPTHDNDNWM-G 77 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCT-TCSEEEECTTSCEEEE-ET-TEEEEESCCCSTTCCHH-H
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccc-cceeEEECCCccEEEE-eC-CeEEEECCCCCCccccc-c
Confidence 34566666666 66665554433 12222221 23 6789999999998888 44 77766665543322111 1
Q ss_pred CCcc--------eEEEEECCCCCEEEEecCCeEEEEEccCCce-------EEEecccCCCeEEEEEecCCCEEEEecCCC
Q psy10867 77 CPGR--------ISSMQASPDAAYIAVSIETKLHMWQISSGRL-------LATASSHYQPITIVKWSADSNFIVTGGEDG 141 (343)
Q Consensus 77 ~~~~--------v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 141 (343)
.... ..++.|.|+|.+.++ .||.|+-++..+... ...-..--..+..|.+.|+|.+.+.. |+
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 1222 378999999999988 679988887643211 11111112467999999999977776 77
Q ss_pred eEE
Q psy10867 142 TIC 144 (343)
Q Consensus 142 ~i~ 144 (343)
.+.
T Consensus 155 ~ly 157 (236)
T 1tl2_A 155 QFY 157 (236)
T ss_dssp EEE
T ss_pred cEE
Confidence 754
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.69 E-value=0.013 Score=47.20 Aligned_cols=248 Identities=8% Similarity=-0.038 Sum_probs=130.8
Q ss_pred cCCcceEEEEECCCCCEEEEec-CCeEEEEEccCCceE--EEec----ccCCCeEEEEEecC---CCEEEEe---cCCCe
Q psy10867 76 ICPGRISSMQASPDAAYIAVSI-ETKLHMWQISSGRLL--ATAS----SHYQPITIVKWSAD---SNFIVTG---GEDGT 142 (343)
Q Consensus 76 ~~~~~v~~~~~s~~~~~l~~~~-d~~i~v~~~~~~~~~--~~~~----~~~~~v~~~~~~~~---~~~l~s~---~~dg~ 142 (343)
..-.....|+|.|||.++++.. .|.|++++..+++.. ..+. ...+....|+++|+ +..|+.. ..++.
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3345678999999999999876 899999987666532 2221 23456789999995 3334332 23455
Q ss_pred EEEeecCccceeeeeecCCCCCCCCccccccceeeeec-ccccceEEEEeecCCCceEEEEeeC-------------CCe
Q psy10867 143 ICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS-QHSLPVTHVTLSKLGAKSRVASVSH-------------DRT 208 (343)
Q Consensus 143 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~~ 208 (343)
|.-|.+...... ..........+..+. .....-..|.|.|++ .+.++.+. .|.
T Consensus 109 v~R~~~~~~~~~-----------~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG--~Lyvt~Gd~~~~~~~qd~~~~~G~ 175 (347)
T 3das_A 109 IVRMLYDEKKPS-----------GEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK--MLYAGTGESGDTGLSQDRKSLGGK 175 (347)
T ss_dssp EEEEEBCTTSCT-----------TCCBCCCEEEEEEECCCSSCCCCCEEECTTS--CEEEECBCTTCGGGTTCTTCSTTC
T ss_pred EEEEEeCCCCcc-----------cccCCCcEEEEEcCCCCCCccCccccCCCCC--CEEEEECCCCCCccccCCCCCCCE
Confidence 665655432100 000000001111111 112234679999998 66666432 355
Q ss_pred EEEEecCCC---------ceEEEeecCCcEEEEEEcCCCCEEEEE-cCCCcEEEEEeecccccccccc--------cCCC
Q psy10867 209 CKIFDLCTG---------EDLLSLILDTRLTCVAFDGTEDNIYMG-TSEGVIKSFCLRQVPRTRDHHI--------QDST 270 (343)
Q Consensus 209 i~~wd~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~--------~~~~ 270 (343)
|.-.+.... ..+... .......++|+|++.+.++- +.++.=.|--+.....- -+.. ....
T Consensus 176 IlRi~~dG~ip~~nPf~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny-GwP~~~g~~~~~~~~~ 253 (347)
T 3das_A 176 ILRMTPDGEPAPGNPFPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY-GWPEAEGKGGGSGFHD 253 (347)
T ss_dssp EEEECTTSSBCTTCSSTTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC-CTTTCCSSCCCTTCCC
T ss_pred EEEEeCCCCccCCCCCCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEe-cCCcccCCCCCccccC
Confidence 555554321 112222 22346678999987765553 22332222222222110 0000 0011
Q ss_pred CCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceee----eecc-cCCceEEEEEccCCCeeeecc
Q psy10867 271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCL----RTIQ-HKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 271 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~-~~~~v~~~~~sp~~~~l~~~~ 339 (343)
++..+..+......++|. ++..+...-..+.|....+.....+ ..+. ..+.+.+++..|||...++.+
T Consensus 254 P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 254 PVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 222232222456778876 4666666555667766676554322 2233 457899999999998877654
No 324
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.69 E-value=0.013 Score=47.20 Aligned_cols=245 Identities=13% Similarity=0.097 Sum_probs=130.3
Q ss_pred EEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCccccee------cccCCcceEEEEECCC----CCEEEE-e
Q psy10867 28 LMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQL------RLICPGRISSMQASPD----AAYIAV-S 96 (343)
Q Consensus 28 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~------~~~~~~~v~~~~~s~~----~~~l~~-~ 96 (343)
+..+...-. ....|+|.|||.++++....|.|++++..+++.... ..........|+|+|+ +.+.++ +
T Consensus 24 ~~~va~gL~-~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLN-SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCS-SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCC-CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 334444444 789999999999999888559999998665543211 1233567899999995 444443 2
Q ss_pred --cCCeEEEEEccCC----------ceE-EEec-ccCCCeEEEEEecCCCEEEEecCC-------------CeEEEeecC
Q psy10867 97 --IETKLHMWQISSG----------RLL-ATAS-SHYQPITIVKWSADSNFIVTGGED-------------GTICVWQLS 149 (343)
Q Consensus 97 --~d~~i~v~~~~~~----------~~~-~~~~-~~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~ 149 (343)
.++.|.-|.+..+ +.+ ..+. .....-..|.|.|||.+.++.+.. |.|.-.+..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 3556777766542 111 1222 111234579999999877775532 333333332
Q ss_pred ccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEe-eCCCeEEEEecCCCc----------
Q psy10867 150 RLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV-SHDRTCKIFDLCTGE---------- 218 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~---------- 218 (343)
... ...+... .....-.+|. ....++|+|++ .++++- +.++.=.|--+..+.
T Consensus 183 G~i-----------p~~nPf~---~~~i~a~G~R-Np~Gla~dp~G--~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~ 245 (347)
T 3das_A 183 GEP-----------APGNPFP---GSPVYSYGHR-NVQGLAWDDKQ--RLFASEFGQDTWDELNAIKPGDNYGWPEAEGK 245 (347)
T ss_dssp SSB-----------CTTCSST---TCCEEEBCCS-BCCEEEECTTC--CEEEEECCSSSCEEEEEECTTCBCCTTTCCSS
T ss_pred CCc-----------cCCCCCC---CCeEEeeCCC-CcceEEECCCC--CEEEEecCCCCCceeeEEcCCCEecCCcccCC
Confidence 110 0000000 0111122443 35578999976 444432 223222222222221
Q ss_pred --------eEEEeecC-CcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc
Q psy10867 219 --------DLLSLILD-TRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289 (343)
Q Consensus 219 --------~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 289 (343)
.+..+.+. .....++|. ++..+...-..+.|....+....... +....+.+....+..++..|
T Consensus 246 ~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~-------~~e~~l~~~~gR~~dv~~~p 317 (347)
T 3das_A 246 GGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAA-------DPQAFLEGEYGRLRTVAPAG 317 (347)
T ss_dssp CCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESS-------CCEEESTTTSSCEEEEEEEE
T ss_pred CCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceec-------ceEEeecCCCCCccEEEECC
Confidence 12222222 355677776 35556666666777777776532111 00112233456799999999
Q ss_pred CCCEEEEEe
Q psy10867 290 TGITLLSSS 298 (343)
Q Consensus 290 ~~~~l~s~~ 298 (343)
||.++++..
T Consensus 318 DG~lyv~td 326 (347)
T 3das_A 318 GDKLWLVTS 326 (347)
T ss_dssp TTEEEEEEC
T ss_pred CCcEEEEEc
Confidence 998666543
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.68 E-value=0.013 Score=46.56 Aligned_cols=216 Identities=10% Similarity=0.089 Sum_probs=103.7
Q ss_pred CeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ecC-----CeEEEEEccCCceEEEe--cccCCCeEEEEE
Q psy10867 58 PMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SIE-----TKLHMWQISSGRLLATA--SSHYQPITIVKW 127 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~d-----~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~ 127 (343)
..+..||..+.+...... .....-..+.+ ++.+++. |.+ ..+.+||+.+.+-...- .........+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV- 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-
Confidence 357888888765443211 11111122222 5665555 433 36889998877543322 11111122222
Q ss_pred ecCCCEEEEecCCC-----eEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEE
Q psy10867 128 SADSNFIVTGGEDG-----TICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVAS 202 (343)
Q Consensus 128 ~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 202 (343)
-+++.++.|+.++ .+.+||+.+..-... ..+....... +++.. ++ .+++.
T Consensus 107 -~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--------------------~~~p~~r~~~-~~~~~-~~--~iyv~ 161 (302)
T 2xn4_A 107 -LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV--------------------APMNTRRSSV-GVGVV-GG--LLYAV 161 (302)
T ss_dssp -ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE--------------------CCCSSCCBSC-EEEEE-TT--EEEEE
T ss_pred -ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec--------------------CCCCCcccCc-eEEEE-CC--EEEEE
Confidence 2667777777543 477788776532211 1111111111 12222 34 56676
Q ss_pred eeCC-------CeEEEEecCCCceEEEeecC--CcEEEEEEcCCCCEEEEEcCC-----CcEEEEEeecccccccccccC
Q psy10867 203 VSHD-------RTCKIFDLCTGEDLLSLILD--TRLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQVPRTRDHHIQD 268 (343)
Q Consensus 203 ~~~d-------~~i~~wd~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~ 268 (343)
|+.+ ..+.+||+.+.+-...-..+ ..-.+++.. +++.++.|+.+ ..+.+||+.+..=..
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~------ 234 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ------ 234 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEE------
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEee------
Confidence 6542 45888998776533321111 111122222 46667777654 368888876532111
Q ss_pred CCCCCccccccCcEEEEEEccCCCEEEEEeCCC-----cEEEEeccccee
Q psy10867 269 STSNPDFIGHEKQVTSLSCSITGITLLSSSADE-----TLKIWHTISRQC 313 (343)
Q Consensus 269 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~ 313 (343)
+..+.........+. .++++++.|+.++ .+.+||+.+.+-
T Consensus 235 ---~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 235 ---VADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp ---ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ---CCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 001111111111222 3677778887653 489999877643
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.65 E-value=0.013 Score=55.70 Aligned_cols=232 Identities=9% Similarity=0.112 Sum_probs=130.4
Q ss_pred CeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEe
Q psy10867 58 PMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG 137 (343)
Q Consensus 58 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 137 (343)
..|.|.|+.++..+... +-.--+.-.+|..+.+|.-...+++|+|+++...+....- ..+|.-=.|-. .+.|+..
T Consensus 48 ~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWis-~~~l~lV 122 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-LNTVALV 122 (1630)
T ss_pred ceEEEEECCCCCCcccc---cccchhhccCCCcceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEecC-CCeeEEE
Confidence 47889998886654222 1122344568888888875578999999998877766653 34565556643 3344444
Q ss_pred cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeeccc----ccceEEEEeecCCCceEEEEee-------CC
Q psy10867 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQH----SLPVTHVTLSKLGAKSRVASVS-------HD 206 (343)
Q Consensus 138 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~-------~d 206 (343)
+. ..|..|++.... .|.+.+..| ...|..-..+++. ++++..+ -.
T Consensus 123 T~-~aVyHW~~~~~s---------------------~P~k~fdR~~~L~~~QIinY~~d~~~--kW~~l~gi~~~~~~v~ 178 (1630)
T 1xi4_A 123 TD-NAVYHWSMEGES---------------------QPVKMFDRHSSLAGCQIINYRTDAKQ--KWLLLTGISAQQNRVV 178 (1630)
T ss_pred cC-CeEEEeccCCCC---------------------ccHHHHhcchhcccCeeEEeeeCCCC--CeEEEEeeccCCCccc
Confidence 43 579999996521 133333333 4556666777776 5655332 35
Q ss_pred CeEEEEecCCCceEEEeecCCcEEEEEEc--CCCCEEEE-Ec---CCCcEEEEEeecc-cccccccccCCCCCCcccccc
Q psy10867 207 RTCKIFDLCTGEDLLSLILDTRLTCVAFD--GTEDNIYM-GT---SEGVIKSFCLRQV-PRTRDHHIQDSTSNPDFIGHE 279 (343)
Q Consensus 207 ~~i~~wd~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~-~~---~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~ 279 (343)
|.+.+|..+.+....--.|-.....+... +....|++ +. ..++++|.++... .....+..........-....
T Consensus 179 G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~ 258 (1630)
T 1xi4_A 179 GAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN 258 (1630)
T ss_pred ceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccccc
Confidence 88899987654321111121111111111 11111222 21 1368899888653 111111000000000001123
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 280 KQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 280 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
+-..++..++.-..+..-+.-|.|.+||+.+|.++..-+
T Consensus 259 Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 345677888888888888899999999999998876554
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.65 E-value=0.012 Score=46.72 Aligned_cols=213 Identities=12% Similarity=0.084 Sum_probs=103.3
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC-----CeEEEEeCCCcccceecc--cCCcceEEEEEC
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK-----PMIQAWPVNSQEKAQLRL--ICPGRISSMQAS 87 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s 87 (343)
..+.++|+.+.+-...-.......-.+++.. ++.+++.|..+ ..+.+||..+.+...... ........+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-
Confidence 4688899887653332111111012233333 55555555422 358889988766443221 11111222222
Q ss_pred CCCCEEEE-ecC-----CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecCC-------CeEEEeecCccc
Q psy10867 88 PDAAYIAV-SIE-----TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGED-------GTICVWQLSRLI 152 (343)
Q Consensus 88 ~~~~~l~~-~~d-----~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~ 152 (343)
++++++. |.+ ..+.+||+.+.+-... +....... +++. -+++.++.|+.+ ..+.+||+.+..
T Consensus 108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 5555554 443 3588899887754332 21111112 2222 266777777642 347888887653
Q ss_pred eeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeecC-
Q psy10867 153 CKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLILD- 226 (343)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~- 226 (343)
-... ..+....... +++.. ++ .+++.|+.+ ..+.+||+.+.+-...-...
T Consensus 185 W~~~--------------------~~~p~~r~~~-~~~~~-~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 240 (302)
T 2xn4_A 185 WTYI--------------------AEMSTRRSGA-GVGVL-NN--LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM 240 (302)
T ss_dssp EEEE--------------------CCCSSCCBSC-EEEEE-TT--EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred EEEC--------------------CCCccccccc-cEEEE-CC--EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC
Confidence 2211 1111111111 22222 34 677777764 46889998876533222211
Q ss_pred -CcEEEEEEcCCCCEEEEEcCCC-----cEEEEEeec
Q psy10867 227 -TRLTCVAFDGTEDNIYMGTSEG-----VIKSFCLRQ 257 (343)
Q Consensus 227 -~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~ 257 (343)
..-..++. -+++.++.|+.++ .+.+||+.+
T Consensus 241 ~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 241 CRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred ccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 11111222 2566677776543 477787764
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.64 E-value=0.046 Score=51.87 Aligned_cols=132 Identities=12% Similarity=0.137 Sum_probs=82.7
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce-ecccCCcceEEEEECCC----
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ-LRLICPGRISSMQASPD---- 89 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~s~~---- 89 (343)
..|++.+...+..+..++...+..|...+.+. ..++++ .. +.+.+++++.++... ....-...|.|+++.|.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~-~~vvva-~g-~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~ 568 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS-SQVVVA-VG-RALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN 568 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS-SEEEEE-ET-TEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSST
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC-CEEEEE-EC-CEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCc
Confidence 45677776666667777765443677776654 344444 44 788888776543221 11234568999999863
Q ss_pred --CCEEEEe-c-CCeEEEEEccCCceEEEecc-cCCCeEEEEEec--CCCEEEEecCCCeEEEeecC
Q psy10867 90 --AAYIAVS-I-ETKLHMWQISSGRLLATASS-HYQPITIVKWSA--DSNFIVTGGEDGTICVWQLS 149 (343)
Q Consensus 90 --~~~l~~~-~-d~~i~v~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~ 149 (343)
+.+++.+ + |++++|+++.+.+.+....- ......++.+.. ...+|..|-.||.+.-+.+.
T Consensus 569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 569 GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred ccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 3677764 4 89999999987766543221 123445555432 33578889999998766654
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.63 E-value=0.011 Score=47.13 Aligned_cols=220 Identities=10% Similarity=0.050 Sum_probs=107.1
Q ss_pred EEEecCC--CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCC----CeEEEEeCCCcccceecc--cCC
Q psy10867 7 VAFSYDG--SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGK----PMIQAWPVNSQEKAQLRL--ICP 78 (343)
Q Consensus 7 ~~~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~iw~~~~~~~~~~~~--~~~ 78 (343)
+.+-++. ...+.+||..+++-...-.......-.+++.. ++.+++.|..+ ..+.+||..+.+...... ...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 3444443 36789999887654332111111012233333 55565555432 578889988776443221 111
Q ss_pred cceEEEEECCCCCEEEE-ecC------CeEEEEEccCCceEEEe--cccCCCeEEEEEecCCCEEEEecC---------C
Q psy10867 79 GRISSMQASPDAAYIAV-SIE------TKLHMWQISSGRLLATA--SSHYQPITIVKWSADSNFIVTGGE---------D 140 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~-~~d------~~i~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~---------d 140 (343)
.....+.+ ++++++. |.+ ..+.+||+.+.+-...- .........+. -+++.++.|+. -
T Consensus 93 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 93 DSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp BSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEEC
T ss_pred cceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccccc
Confidence 11222222 5666554 433 46999999887543321 11111112222 26677777763 3
Q ss_pred CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecC
Q psy10867 141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLC 215 (343)
Q Consensus 141 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~ 215 (343)
..+.+||+.+..-.. +..+......- ++... ++ .+++.|+.+ ..+.+||+.
T Consensus 169 ~~~~~yd~~~~~W~~--------------------~~~~p~~r~~~-~~~~~-~~--~i~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 169 NSCEVYDPATETWTE--------------------LCPMIEARKNH-GLVFV-KD--KIFAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp CCEEEEETTTTEEEE--------------------ECCCSSCCBSC-EEEEE-TT--EEEEECCEETTEEBCCEEEEETT
T ss_pred ceEEEeCCCCCeEEE--------------------CCCccchhhcc-eEEEE-CC--EEEEEeCCCCCCCCceEEEeeCC
Confidence 457888887753221 11111111111 12222 44 677777653 458889987
Q ss_pred CCceEEEeec--CC-cEEEEEEcCCCCEEEEEcCC-----CcEEEEEeec
Q psy10867 216 TGEDLLSLIL--DT-RLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQ 257 (343)
Q Consensus 216 ~~~~~~~~~~--~~-~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 257 (343)
+.+-...-.. .. ....+.+ +++.++.|+.+ ..+.+||..+
T Consensus 225 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 225 LNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 7643221111 11 1222222 56677777644 4566777654
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.60 E-value=0.015 Score=46.40 Aligned_cols=226 Identities=10% Similarity=0.022 Sum_probs=108.5
Q ss_pred CceEEEEEcC----CCeEEEEeCCCcccceecc--cCCcceEEEEECCCCCEEEE-ec----C-----CeEEEEEccCCc
Q psy10867 47 NDYVLGVEKG----KPMIQAWPVNSQEKAQLRL--ICPGRISSMQASPDAAYIAV-SI----E-----TKLHMWQISSGR 110 (343)
Q Consensus 47 ~~~~~~~~~~----~~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~----d-----~~i~v~~~~~~~ 110 (343)
++.+++.|.. -..+.+||..+.+...... ...... +++.. ++.+++. |. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 4455555441 1468899988766543211 111111 22222 5555554 43 2 358899988775
Q ss_pred eEEEe--cccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccc
Q psy10867 111 LLATA--SSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHS 183 (343)
Q Consensus 111 ~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
-...- .........+.+ +++.++.|+.+ ..+.+||+.+.+-... ..+....
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--------------------~~~p~~r 159 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLV--------------------APMLTRR 159 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEEC--------------------CCCSSCC
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeEC--------------------CCCCccc
Confidence 43321 111112222222 67777777643 3577888876532211 0111111
Q ss_pred cceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeec--CCcEEEEEEcCCCCEEEEEcCC-----CcEE
Q psy10867 184 LPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLIL--DTRLTCVAFDGTEDNIYMGTSE-----GVIK 251 (343)
Q Consensus 184 ~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----~~i~ 251 (343)
..-..+.+ ++ .+++.|+.+ ..+.+||+.+.+-...-.. ...-.+++.. +++.++.|+.+ ..+.
T Consensus 160 ~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~ 234 (308)
T 1zgk_A 160 IGVGVAVL--NR--LLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVE 234 (308)
T ss_dssp BSCEEEEE--TT--EEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEE
T ss_pred cceEEEEE--CC--EEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEE
Confidence 11112222 44 677777654 4588899876643221111 1111122222 56666777654 4688
Q ss_pred EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC-----CcEEEEecccce
Q psy10867 252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD-----ETLKIWHTISRQ 312 (343)
Q Consensus 252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 312 (343)
+||+.+..=.. +..+.........+. -++++++.|+.+ ..+.+||+.+.+
T Consensus 235 ~yd~~~~~W~~---------~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 235 RYDVETETWTF---------VAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEETTTTEEEE---------CCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEeCCCCcEEE---------CCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 88876532111 111111111112222 266777777754 357788887654
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0048 Score=49.55 Aligned_cols=206 Identities=13% Similarity=0.139 Sum_probs=108.3
Q ss_pred CCCEEEEecCCeEEEEEccCCceEEEeccc-CCCeEEEEEe--c-CCCEEEEe-cCCCeEEEeecCccceeeeeecCCCC
Q psy10867 89 DAAYIAVSIETKLHMWQISSGRLLATASSH-YQPITIVKWS--A-DSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPG 163 (343)
Q Consensus 89 ~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~ 163 (343)
++..++++.||.|+-+|..+|+.+-+++.. ..++....-. + ++..++.. +.||.|..++..++.....+..+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~--- 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR--- 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH---
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc---
Confidence 345666789999999999999998887654 1233221100 1 22333333 68999999998877443322210
Q ss_pred CCCCccccccceeeeecccccceEE---EEe-----ecCCCceEEEEeeCCCeEEEEecCCCceEEEeecCCcE------
Q psy10867 164 SSGKGVTGLTEPLHVKSQHSLPVTH---VTL-----SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL------ 229 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-----~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i------ 229 (343)
.+. ...++.. ..+ ...+ ..+++|+.+|.+...|+++|+.++.+....+.
T Consensus 87 --------------~lv-~~SP~~~~~~pvv~~~~~~~~~--g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~ 149 (339)
T 2be1_A 87 --------------QLV-STSPLHLKTNIVVNDSGKIVED--EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQ 149 (339)
T ss_dssp --------------HHH-TTCSEEEECC----------CC--EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC-----
T ss_pred --------------cce-eccccccCCCceeecccccccC--CEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccc
Confidence 000 1111111 000 0022 58899999999999999999999998754321
Q ss_pred --EEEEEc-----CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccccc--CcE-EEEEEccCCCEEEEEeC
Q psy10867 230 --TCVAFD-----GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE--KQV-TSLSCSITGITLLSSSA 299 (343)
Q Consensus 230 --~~~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~~~~~s~~~~~l~s~~~ 299 (343)
.|.... ..+..++.+..+..+.+.+ +++. ...... ....... ..+ ..-..+.|+.+ +.++.
T Consensus 150 ~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~------s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~ 220 (339)
T 2be1_A 150 SVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTY------STWQQNVLDVPLALQNTFSKDGMC-IAPFR 220 (339)
T ss_dssp ---------------CCEEEEEEEEEECEECC-TTSC-CCCCEE------EEEECCTTTHHHHTTCSSCSSSCC-EEEET
T ss_pred ccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEec------ccccccccccccccccccccCCcE-EEECC
Confidence 111111 1235677666666555554 2211 110000 0000000 000 00001234555 44678
Q ss_pred CCcEEEEecccceeee-ecccCCce
Q psy10867 300 DETLKIWHTISRQCLR-TIQHKGPV 323 (343)
Q Consensus 300 dg~i~iwd~~~~~~~~-~~~~~~~v 323 (343)
||.|.-+|..+|+.+. +.+...++
T Consensus 221 dg~v~A~d~~~G~~~W~~~~l~sPv 245 (339)
T 2be1_A 221 DKSLLASDLDFRIARWVSPTFPGII 245 (339)
T ss_dssp TTEEEEECSTTCCEEEECCCCSSCE
T ss_pred CCEEEEEECCCCcEEEEeecCCCCe
Confidence 8899989988888877 44434443
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.54 E-value=0.03 Score=47.30 Aligned_cols=102 Identities=13% Similarity=0.062 Sum_probs=62.9
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccce--ecc------cCCcceEEEEECCC----CCEEEE-ec-------
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ--LRL------ICPGRISSMQASPD----AAYIAV-SI------- 97 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~--~~~------~~~~~v~~~~~s~~----~~~l~~-~~------- 97 (343)
....|+|.|+|+++++....+.|.+++..+++... .+. ........|+|+|+ +.+.++ +.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 67899999999999888764578888765444321 111 12456789999995 444444 22
Q ss_pred -----CCeEEEEEccCC-------ceEE-Eec-ccCCCeEEEEEecCCCEEEEecC
Q psy10867 98 -----ETKLHMWQISSG-------RLLA-TAS-SHYQPITIVKWSADSNFIVTGGE 139 (343)
Q Consensus 98 -----d~~i~v~~~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~s~~~ 139 (343)
...|.-+++..+ +.+. .+. ........|+|.|||.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665432 1111 122 11234689999999997777554
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.47 E-value=0.025 Score=45.07 Aligned_cols=213 Identities=10% Similarity=0.072 Sum_probs=102.3
Q ss_pred CeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcC----C-----CeEEEEeCCCcccceecc--cCCcceEE
Q psy10867 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKG----K-----PMIQAWPVNSQEKAQLRL--ICPGRISS 83 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~-----~~i~iw~~~~~~~~~~~~--~~~~~v~~ 83 (343)
..+.++|..+.+-...-.......-.+++.. ++.+++.|.. + ..+.+||..+.+...... ........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 4688999877654332111111022233333 4555554432 1 368889988765443221 11112222
Q ss_pred EEECCCCCEEEE-ec-----CCeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecCC-----CeEEEeecCc
Q psy10867 84 MQASPDAAYIAV-SI-----ETKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGED-----GTICVWQLSR 150 (343)
Q Consensus 84 ~~~s~~~~~l~~-~~-----d~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~ 150 (343)
+.+ ++++++. |. ...+.+||+.+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 118 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 118 GVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 222 5666665 32 24688999887754332 1111111222222 66777777654 4578888876
Q ss_pred cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCC-----CeEEEEecCCCceEEEeec
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHD-----RTCKIFDLCTGEDLLSLIL 225 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~ 225 (343)
..-... ..+.........+ .. ++ .+++.|+.+ ..+.+||+.+.+-...-..
T Consensus 194 ~~W~~~--------------------~~~p~~r~~~~~~-~~-~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 194 NEWRMI--------------------TAMNTIRSGAGVC-VL-HN--CIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp TEEEEC--------------------CCCSSCCBSCEEE-EE-TT--EEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred CeEeeC--------------------CCCCCccccceEE-EE-CC--EEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 532211 1111111111222 22 44 677777764 5688999887643221111
Q ss_pred C--CcEEEEEEcCCCCEEEEEcCC-----CcEEEEEeec
Q psy10867 226 D--TRLTCVAFDGTEDNIYMGTSE-----GVIKSFCLRQ 257 (343)
Q Consensus 226 ~--~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 257 (343)
+ ..-.+++.. +++.++.|+.+ ..+.+||+.+
T Consensus 250 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 250 KHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 1 111122222 45666666643 3456666543
No 334
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.37 E-value=0.024 Score=42.08 Aligned_cols=147 Identities=7% Similarity=-0.027 Sum_probs=83.9
Q ss_pred cceEEEEECCCCCEEEEecCCeEEEEEccCCce------EEEec--ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCc
Q psy10867 79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRL------LATAS--SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSR 150 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~------~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 150 (343)
..+..++|+|+|.+.++ .+|.++-.+..+... -..+- +-.. ..++.|.|++.+.++ .||.|.-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46779999999998888 788877766544211 11110 1111 468899999987777 559888777543
Q ss_pred cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce------EEEee
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED------LLSLI 224 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~ 224 (343)
.....-+ ......-..-=..+..+.+.|+| .+. +.. |+.++-....++.. ...+.
T Consensus 117 ~~~~~Wl---------------~~a~~vg~~gw~~~~~lff~p~G--~Ly-av~-dg~lyr~~~P~~~~~~wl~~~~~~g 177 (236)
T 1tl2_A 117 SDTDNWI---------------ARATEVGSGGWSGFKFLFFHPNG--YLY-AVH-GQQFYKALPPVSNQDNWLARATKIG 177 (236)
T ss_dssp STTCCHH---------------HHSEEEECSSGGGEEEEEECTTS--CEE-EEE-TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred CCCCcee---------------ccccEeccCCCCceEEEEECCCc--eEE-EEe-CCcEEecCCCCCCCcccccccceec
Confidence 2111000 00011111112467899999999 444 444 78765443332221 11111
Q ss_pred --cCCcEEEEEEcCCCCEEEEEcCCCcE
Q psy10867 225 --LDTRLTCVAFDGTEDNIYMGTSEGVI 250 (343)
Q Consensus 225 --~~~~i~~~~~~~~~~~l~~~~~d~~i 250 (343)
.-.....+.|.+++...++. ++.+
T Consensus 178 ~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 178 QGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp SSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred cCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 12235557799998887777 6643
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.22 E-value=0.054 Score=43.19 Aligned_cols=180 Identities=8% Similarity=-0.005 Sum_probs=87.2
Q ss_pred eEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEEE-ec----C-------CeEEEEEccCCceEEEe
Q psy10867 49 YVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIAV-SI----E-------TKLHMWQISSGRLLATA 115 (343)
Q Consensus 49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~----d-------~~i~v~~~~~~~~~~~~ 115 (343)
.+++.|. ..+.+||..+++....... ............++.+++. |. + ..+.+||+.+++-.. +
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~ 82 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M 82 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred EEEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence 3444444 4699999988775431111 1122333333446666654 42 1 137888988775432 2
Q ss_pred cccCCCe--EEEEEecCCCEEEEecCC--------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccc
Q psy10867 116 SSHYQPI--TIVKWSADSNFIVTGGED--------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185 (343)
Q Consensus 116 ~~~~~~v--~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
..-..+- .+++.. +++.++.|+.+ ..+.+||+.+.+-.. +..+......
T Consensus 83 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~--------------------~~~~p~~r~~ 141 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE--------------------SDPLPYVVYG 141 (315)
T ss_dssp CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE--------------------CCCCSSCCBS
T ss_pred CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE--------------------CCCCCCcccc
Confidence 1111111 112222 56777777732 348888887653211 1111111111
Q ss_pred eEEEEeecCCCceEEEEeeC-C-----CeEEEEecCCCceEEEeecCC--cEEEEEEcCCCCEEEEEcCCC-----cEEE
Q psy10867 186 VTHVTLSKLGAKSRVASVSH-D-----RTCKIFDLCTGEDLLSLILDT--RLTCVAFDGTEDNIYMGTSEG-----VIKS 252 (343)
Q Consensus 186 v~~~~~~~~~~~~~l~~~~~-d-----~~i~~wd~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~-----~i~i 252 (343)
. +++. -++ .+++.|+. + ..+.+||..+.+-...-..+. .-.+++.. +++.++.|+.++ .+.+
T Consensus 142 ~-~~~~-~~~--~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 216 (315)
T 4asc_A 142 H-TVLS-HMD--LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEV 216 (315)
T ss_dssp C-EEEE-ETT--EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEE
T ss_pred e-eEEE-ECC--EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEE
Confidence 1 1222 344 67777766 2 468899987764322111111 11122222 566777776544 4777
Q ss_pred EEeec
Q psy10867 253 FCLRQ 257 (343)
Q Consensus 253 ~d~~~ 257 (343)
||+.+
T Consensus 217 yd~~~ 221 (315)
T 4asc_A 217 YSITD 221 (315)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77654
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.22 E-value=0.055 Score=43.15 Aligned_cols=132 Identities=11% Similarity=0.045 Sum_probs=65.6
Q ss_pred CeEEEEecCCceEEE-EEecCCCCcceEEEEeCCceEEEEEcC-----C------CeEEEEeCCCcccceecccCC--cc
Q psy10867 15 GAISVWEPKGGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKG-----K------PMIQAWPVNSQEKAQLRLICP--GR 80 (343)
Q Consensus 15 g~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~------~~i~iw~~~~~~~~~~~~~~~--~~ 80 (343)
..+.+||..+++-.. .+.......-.+++. .++.+++.|.. . ..+..||..+.+......... ..
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence 579999998876433 222221202233333 45544444431 1 127788888766432211111 11
Q ss_pred eEEEEECCCCCEEEE-ecC--------CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC-C-----CeE
Q psy10867 81 ISSMQASPDAAYIAV-SIE--------TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE-D-----GTI 143 (343)
Q Consensus 81 v~~~~~s~~~~~l~~-~~d--------~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~-d-----g~i 143 (343)
...+.+ ++++++. |.+ ..+.+||+.+.+-... +....... +++. .+++.++.|+. + ..+
T Consensus 92 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 92 FGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp CEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCTTSCBCCCE
T ss_pred eeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCCCCcccceE
Confidence 112222 5555554 421 3699999987754332 11111111 2222 36677777775 2 358
Q ss_pred EEeecCcc
Q psy10867 144 CVWQLSRL 151 (343)
Q Consensus 144 ~iwd~~~~ 151 (343)
.+||+.+.
T Consensus 168 ~~yd~~~~ 175 (315)
T 4asc_A 168 CVYDPKKF 175 (315)
T ss_dssp EEEETTTT
T ss_pred EEEeCCCC
Confidence 88888765
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.18 E-value=0.13 Score=46.73 Aligned_cols=288 Identities=9% Similarity=0.060 Sum_probs=151.5
Q ss_pred eEEEEecCCceEEEEEe----c-CCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceeccc-----CCcceEEEE
Q psy10867 16 AISVWEPKGGTLLMSYK----G-ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLI-----CPGRISSMQ 85 (343)
Q Consensus 16 ~i~iwd~~~~~~~~~~~----~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~ 85 (343)
.|..+|..+++.. .+. . ... .|.++...+++.+.++.. +-+..++..+++....... ....|.++.
T Consensus 122 Gl~~~~~~~~~~~-~~~~~~~~l~~~-~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 197 (758)
T 3ott_A 122 GLYTYQLQSRKLT-SFDTRRNGLPNN-TIYSIIRTKDNQIYVGTY--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLL 197 (758)
T ss_dssp EEEEEETTTCCEE-EECHHHHCCSCS-CEEEEEECTTCCEEEEET--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEE
T ss_pred cceeEeCCCCeEE-EeccCCCCcCCC-eEEEEEEcCCCCEEEEeC--CCHhhCccCCCceEEecCCCccccccceeEEEE
Confidence 4667776655433 231 1 123 678888888887777654 3477788776553322111 123488887
Q ss_pred ECCCCCEEEEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCC
Q psy10867 86 ASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS 165 (343)
Q Consensus 86 ~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 165 (343)
..+++..|-.+.++.+..++..+++...........|.++...+++.+.+ |+. +-+.+++..+........ .
T Consensus 198 ~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~-~----- 269 (758)
T 3ott_A 198 EDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIH-D----- 269 (758)
T ss_dssp EETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECC-C-----
T ss_pred EECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEc-C-----
Confidence 77666543332245688899877654322111234578888777776554 444 457888876643211100 0
Q ss_pred CCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--------cCCcEEEEEEcCC
Q psy10867 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--------LDTRLTCVAFDGT 237 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------~~~~i~~~~~~~~ 237 (343)
......-....|.++....++ . |-.|+..| +.++... . ....+. ....|.++.-..+
T Consensus 270 ---------~~~~~~l~~~~i~~i~~D~~g--~-lWiGT~~G-l~~~~~~-~-~~~~~~~~~~~~~~~~~~v~~i~~D~~ 334 (758)
T 3ott_A 270 ---------SRNIQSLTNNIIWNIFADQEH--N-IWLGTDYG-ISLSRYN-S-ALQFIPISQITGTGDGNQFYSLFRDSK 334 (758)
T ss_dssp ---------TTCTTSCSCSCEEEEEECTTC--C-EEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECTT
T ss_pred ---------CCCcCcCCcCeEEEEEEcCCC--C-EEEEeCCc-ccccccC-C-ceeEEecccCCCCCCCceEEEEEEcCC
Confidence 000000123458888877776 3 44555556 5444322 1 111111 1345888888887
Q ss_pred CCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeec
Q psy10867 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317 (343)
Q Consensus 238 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 317 (343)
|.+.+. +.+| +..++....................+ ....|.++.-..+|++.+ |+ ++-|..||..+++.....
T Consensus 335 g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~ 408 (758)
T 3ott_A 335 GFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPL--SHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYN 408 (758)
T ss_dssp CCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCC--SCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEE
T ss_pred CCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCC--CCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEee
Confidence 775554 4454 55555433111000000000000011 234688888887777544 44 456899998776543321
Q ss_pred --c-----cCCceEEEEEccCCCeee
Q psy10867 318 --Q-----HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 318 --~-----~~~~v~~~~~sp~~~~l~ 336 (343)
. ....|.++...++|...+
T Consensus 409 ~~~~~~~~~~~~v~~i~~d~~g~lWi 434 (758)
T 3ott_A 409 IVDNTGTYNTNWTYYIFEDTAGQLWI 434 (758)
T ss_dssp EECCC--CBSSSEEEEEECTTSEEEE
T ss_pred cCCCcCCCCCceEEEEEEcCCCCEEE
Confidence 1 124578888777776544
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.99 E-value=0.13 Score=43.45 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=40.6
Q ss_pred CcceEEEEECCCCCEEEEecCC-eEEEEEccCCceE--EEecc------cCCCeEEEEEecC---CCEEEEe
Q psy10867 78 PGRISSMQASPDAAYIAVSIET-KLHMWQISSGRLL--ATASS------HYQPITIVKWSAD---SNFIVTG 137 (343)
Q Consensus 78 ~~~v~~~~~s~~~~~l~~~~d~-~i~v~~~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~s~ 137 (343)
-.....|+|.|+|+++++...+ .|++++..++... ..+.. ..+....|+|+|+ +..|+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 3456799999999999997765 7888886656432 22221 2456789999995 4444443
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.97 E-value=0.11 Score=42.26 Aligned_cols=91 Identities=14% Similarity=0.061 Sum_probs=44.4
Q ss_pred CceEEEE-EcCCCeEEEEeCCC--ccccee--cc-cCCcceEEEEECCCCCEEEE-ec-C---------CeEEEEEccCC
Q psy10867 47 NDYVLGV-EKGKPMIQAWPVNS--QEKAQL--RL-ICPGRISSMQASPDAAYIAV-SI-E---------TKLHMWQISSG 109 (343)
Q Consensus 47 ~~~~~~~-~~~~~~i~iw~~~~--~~~~~~--~~-~~~~~v~~~~~s~~~~~l~~-~~-d---------~~i~v~~~~~~ 109 (343)
++++++. |.....+.+||..+ .+.... +. ........+.+ ++++++. |. + +.+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4555444 44446788999864 322211 11 11111222222 5665554 43 1 36899998877
Q ss_pred ceEEEeccc-CCC-eEEEEEecCCCEEEEecCC
Q psy10867 110 RLLATASSH-YQP-ITIVKWSADSNFIVTGGED 140 (343)
Q Consensus 110 ~~~~~~~~~-~~~-v~~~~~~~~~~~l~s~~~d 140 (343)
+-...-... ... -.+++. .+++.++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 543322111 111 122222 477788888764
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.95 E-value=0.15 Score=43.54 Aligned_cols=249 Identities=10% Similarity=0.045 Sum_probs=136.7
Q ss_pred EEEecCCCCeEEEEecCCceEEEEEecCCCC------------------------cce--EEEEe---CCceEEEEEc-C
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVL------------------------SPH--SMCLL---GNDYVLGVEK-G 56 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------------~v~--~~~~~---~~~~~~~~~~-~ 56 (343)
..+|++..|.|+|+-+.+++.+..+...... ... .+.+. -||+++..-+ .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 3456666899999999999998876432100 111 23333 2577777765 4
Q ss_pred CCeEEEEeCCCcccceecc-cCCcceEEEEEC--CCCCEEEEe--------cCCe-E--------EE---EEccCCceEE
Q psy10867 57 KPMIQAWPVNSQEKAQLRL-ICPGRISSMQAS--PDAAYIAVS--------IETK-L--------HM---WQISSGRLLA 113 (343)
Q Consensus 57 ~~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~l~~~--------~d~~-i--------~v---~~~~~~~~~~ 113 (343)
+..|-..+++..++.++.. .....+..++|- |+..++.++ .||. + .+ .|..+.+...
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 5678788888877765443 556678888886 677777763 2222 1 11 1222222221
Q ss_pred EecccCCCeEEEEEecCCCEEEEecCCC---------------eEEEeecCccceeeeeecCCCCCC--CCc-cccc---
Q psy10867 114 TASSHYQPITIVKWSADSNFIVTGGEDG---------------TICVWQLSRLICKQTVAFGIPGSS--GKG-VTGL--- 172 (343)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~--~~~-~~~~--- 172 (343)
.+.- .+....+...+++.+.++.+.+. .+.++++...+..-.- ....... +-. +...
T Consensus 232 Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~-G~~~~~~g~gv~ViD~~~~~ 309 (638)
T 3sbq_A 232 QVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKA-GDFITLGDSKTPVLDGRKKD 309 (638)
T ss_dssp EEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHT-TCCBCCTTCCCCEEECSCBT
T ss_pred EEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhc-CCeEEECCCCeeEEcccccc
Confidence 1111 12223344566777777655432 2455554321110000 0000000 000 0000
Q ss_pred --cceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCce-------------EEEeecCCcEEEEEEcCC
Q psy10867 173 --TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGED-------------LLSLILDTRLTCVAFDGT 237 (343)
Q Consensus 173 --~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------------~~~~~~~~~i~~~~~~~~ 237 (343)
...+..+-.-......+.++|+|. ..++++-.+.++.++|++.... .......-.....+|.++
T Consensus 310 ~~~~~~~~~iP~pksPHGv~vsPDGk-yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 310 GKDSKFTRYVPVPKNPHGCNTSSDGK-YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGR 388 (638)
T ss_dssp TBCCSSEEEEEESSSCCCEEECTTSC-EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSS
T ss_pred ccCCceEEEEeCCCCCcceeeCCCCC-EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCC
Confidence 011111122234456788999994 4455556689999999874211 333345667889999999
Q ss_pred CCEEEEEcCCCcEEEEEeecc
Q psy10867 238 EDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 238 ~~~l~~~~~d~~i~i~d~~~~ 258 (343)
|....+-.-|.+|..|++...
T Consensus 389 G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp SEEEEEETTTTEEEEEEHHHH
T ss_pred CceEeeeeecceEEEEeccHH
Confidence 955555668999999999764
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.91 E-value=0.12 Score=41.89 Aligned_cols=49 Identities=10% Similarity=-0.014 Sum_probs=26.1
Q ss_pred CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC------CCeEEEeec
Q psy10867 99 TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE------DGTICVWQL 148 (343)
Q Consensus 99 ~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~ 148 (343)
..+.+||+.+.+-... +......-.+++.. +++.++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 5799999987754332 22111111233332 5667777764 234666776
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.83 E-value=0.27 Score=44.64 Aligned_cols=265 Identities=13% Similarity=0.078 Sum_probs=141.2
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEec-
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS- 116 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~- 116 (343)
.|.++....++.+.++... -+..||..+.+...........|.++.. .++.+.+++.+ .+..|+..+++......
T Consensus 64 ~i~~i~~d~~g~lWigT~~--Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~ 139 (758)
T 3ott_A 64 RIYCGVIIDNTYLYMGTDN--GILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTR 139 (758)
T ss_dssp CEEEEEEETTTEEEEEETT--EEEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHH
T ss_pred eEEEEEEcCCCcEEEEeCC--CeEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccC
Confidence 6888888888877766543 4788998776543211112335777654 46665555544 78889987765433211
Q ss_pred ---ccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec
Q psy10867 117 ---SHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK 193 (343)
Q Consensus 117 ---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (343)
.....|.++....++.+.+ |+.+ -+..++..+..... +.. + .........|.++...+
T Consensus 140 ~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~---------------~-~~~~~~~~~i~~i~~d~ 200 (758)
T 3ott_A 140 RNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPL---------------P-VHSSQSNLFVNSLLEDT 200 (758)
T ss_dssp HHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECC---------------C-CCTTCSSCCEEEEEEET
T ss_pred CCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecC---------------C-CccccccceeEEEEEEC
Confidence 1234688888877777555 4444 47778876643211 100 0 00000123477887776
Q ss_pred CCCceEEEEeeCCCeEEEEecCCCceEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCC
Q psy10867 194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN 272 (343)
Q Consensus 194 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 272 (343)
++ ..|..|+. +-+..+|..+++...... ....|.++...+++.+.+ |+.+ -+.+++....... .+... ....
T Consensus 201 ~~--~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~-~~~~~-~~~~ 273 (758)
T 3ott_A 201 TR--QCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQ-HIIHD-SRNI 273 (758)
T ss_dssp TT--TEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCE-EECCC-TTCT
T ss_pred CC--CEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEE-EEEcC-CCCc
Confidence 65 44444554 458888877665332211 234588888888776555 4444 5777776543211 00000 0000
Q ss_pred CccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc------cCCceEEEEEccCCCeee
Q psy10867 273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ------HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 273 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~~~sp~~~~l~ 336 (343)
..+ ....|.++....+|.+. .|+..| +.++............ ....|.++.-..+|..-+
T Consensus 274 ~~l--~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi 339 (758)
T 3ott_A 274 QSL--TNNIIWNIFADQEHNIW-LGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF 339 (758)
T ss_dssp TSC--SCSCEEEEEECTTCCEE-EEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE
T ss_pred CcC--CcCeEEEEEEcCCCCEE-EEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE
Confidence 111 23568899888777644 444556 5544322111111110 123577777666665443
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.83 E-value=0.13 Score=40.78 Aligned_cols=223 Identities=10% Similarity=0.040 Sum_probs=113.9
Q ss_pred CCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEe-c--------------CCeEEEEEccCCceEEEecccCC
Q psy10867 56 GKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVS-I--------------ETKLHMWQISSGRLLATASSHYQ 120 (343)
Q Consensus 56 ~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~--------------d~~i~v~~~~~~~~~~~~~~~~~ 120 (343)
+++.|...+.+.....+... .. +--+++++.+|.-+ . ...|+..++..++...... .
T Consensus 35 d~~~ly~~~~dg~~~~~l~~---~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~ 106 (302)
T 3s25_A 35 DNGRLYAMNIDGSNIHKLSN---DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---D 106 (302)
T ss_dssp GTTEEEEEETTSCSCEEEEE---EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---S
T ss_pred CCceEEEEcCCCCCCEEccC---Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---C
Confidence 34667666766554333321 12 23457888888742 2 2467888877665433222 1
Q ss_pred CeEEEEEecCCCEEEEec--C--CCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCC
Q psy10867 121 PITIVKWSADSNFIVTGG--E--DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196 (343)
Q Consensus 121 ~v~~~~~~~~~~~l~s~~--~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 196 (343)
. +..|+++++.|+-.. . +..|...++.... ...+..+.. ..++++++
T Consensus 107 ~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-----------------------~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 107 P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-----------------------KKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-----------------------CEEEESSCC----CCSEEETT
T ss_pred C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-----------------------eEEEeCCCc----eEeeEECC
Confidence 1 236778888887665 2 3455555555421 111222222 35677774
Q ss_pred ceEEEEeeCCCeEEEEecCCCceEEEeecCCcEEEEEEcCCCCEEEEEcCCC--cEEEEEeecccccccccccCCCCCCc
Q psy10867 197 KSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEG--VIKSFCLRQVPRTRDHHIQDSTSNPD 274 (343)
Q Consensus 197 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~ 274 (343)
.+..+......|..-++..+.....+. .... ..+.|++.+|+-...++ .|..-++...... .
T Consensus 158 -~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~------------~ 221 (302)
T 3s25_A 158 -YFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV------------V 221 (302)
T ss_dssp -EEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE------------E
T ss_pred -EEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE------------E
Confidence 344454446788888876655433322 2322 24569999888765433 4555555443221 1
Q ss_pred cccccCcEEEEEEccCCCEEEEEeC--CCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 275 FIGHEKQVTSLSCSITGITLLSSSA--DETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 275 ~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
+. ...+ ..|+|++++|.-++. .+.|..-++. |...+.+... .+. .+++.+.+|+-..
T Consensus 222 Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~~~-~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 222 LT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND-GTGFKELAKG-EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp CS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT-SCCCEEEEES-CEE--EEEECSSEEEEEE
T ss_pred Ee--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC-CCccEEeeCC-ccc--eEEEeCCEEEEEE
Confidence 11 1222 337788887775532 3455555553 3333333211 222 3444555555443
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.81 E-value=0.13 Score=40.71 Aligned_cols=194 Identities=9% Similarity=0.072 Sum_probs=101.1
Q ss_pred CCCCEEEEe---cCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCC--------------CeEEEeecCc
Q psy10867 88 PDAAYIAVS---IETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED--------------GTICVWQLSR 150 (343)
Q Consensus 88 ~~~~~l~~~---~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------------g~i~iwd~~~ 150 (343)
+++.++.-+ .++.|+..+.+... ...+... .+--+++++++|+-.... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 456666542 35677777764443 3333321 133457888888776542 3566666665
Q ss_pred cceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEee----CCCeEEEEecCCCceEEEeecC
Q psy10867 151 LICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVS----HDRTCKIFDLCTGEDLLSLILD 226 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~----~d~~i~~wd~~~~~~~~~~~~~ 226 (343)
... ..+.. .. ...+++++ +.|+-.. ....|...++.... ...+...
T Consensus 98 ~~~-----------------------~~l~~--~~--~~~~s~~g--~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~ 147 (302)
T 3s25_A 98 HGS-----------------------TVLDP--DP--CIYASLIG--NYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNH 147 (302)
T ss_dssp CCC-----------------------EEEEC--SC--EEEEEEET--TEEEEEEESSSSCEEEEEEETTSCC-CEEEESS
T ss_pred Ccc-----------------------eEeec--CC--ccEEEEeC--CEEEEEeecCCCCceEEEEECCCCC-eEEEeCC
Confidence 421 11111 11 23567777 4555443 34566666765433 3333322
Q ss_pred CcEEEEEEcCCCCEEEEEcC-CCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC--CcE
Q psy10867 227 TRLTCVAFDGTEDNIYMGTS-EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD--ETL 303 (343)
Q Consensus 227 ~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~i 303 (343)
.. ..++|+++.|+-.+. ...|+..++....... + +. +... ..++|++.+|+-...+ ..|
T Consensus 148 ~~---~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~---------l--~~---~~~~-~~~~P~g~~iy~t~~~~~~~I 209 (302)
T 3s25_A 148 YL---FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL---------F--YD---CNCY-KPVVLDDTNVYYMDVNRDNAI 209 (302)
T ss_dssp CC---CCSEEETTEEEEECTTTCCEEEEETTTTEEEE---------E--EC---SCEE-EEEEEETTEEEEEEGGGTTEE
T ss_pred Cc---eEeeEECCEEEEEeCCCceEEEEECCCCCEEE---------E--eC---CCcc-ceeeecCCEEEEEEcCCCcEE
Confidence 11 456788888886654 5677777765533211 1 11 1222 2356888888765543 345
Q ss_pred EEEecccceeeeecccCCceEEEEEccCCCeeeec
Q psy10867 304 KIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 304 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 338 (343)
..-++.... ...+.. ..+ ..|+|++.+|+-+
T Consensus 210 ~~~~ldG~~-~~~Lt~-~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 210 VHVNINNPN-PVVLTE-ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEECSSSCC-CEECSC-SCE--EEEEEETTEEEEE
T ss_pred EEEECCCCC-eEEEeC-CCc--ceEEECCCEEEEE
Confidence 555654433 333331 223 3477888887654
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.55 E-value=0.21 Score=39.75 Aligned_cols=140 Identities=9% Similarity=0.026 Sum_probs=68.4
Q ss_pred EEEecCCCCeEEEEecCCceEEE-EEecCCCCcceEEEEeCCceEEEEEcC----CC-------eEEEEeCCCcccceec
Q psy10867 7 VAFSYDGSGAISVWEPKGGTLLM-SYKGASVLSPHSMCLLGNDYVLGVEKG----KP-------MIQAWPVNSQEKAQLR 74 (343)
Q Consensus 7 ~~~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~-------~i~iw~~~~~~~~~~~ 74 (343)
.++.-++. .+..||..+.+-.. .+.......-.+++ ..++.+++.|.. ++ .+..||..+.+.....
T Consensus 17 ~i~~~GG~-~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT-AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS-EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc-ceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 34444443 48899998876544 22221210222333 345655555541 11 2778888776544321
Q ss_pred c--cCCcceEEEEECCCCCEEEE-ecC-------CeEEEEEccCCceEEE--ecccCCCeEEEEEecCCCEEEEecC---
Q psy10867 75 L--ICPGRISSMQASPDAAYIAV-SIE-------TKLHMWQISSGRLLAT--ASSHYQPITIVKWSADSNFIVTGGE--- 139 (343)
Q Consensus 75 ~--~~~~~v~~~~~s~~~~~l~~-~~d-------~~i~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~--- 139 (343)
. ........+.+ ++++++. |.+ ..+.+||+.+.+-... +......- +++. .+++.++.|+.
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDD 170 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESS
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCC
Confidence 1 11111222222 5555554 432 3588899887754332 11111111 1222 36777777764
Q ss_pred ---CCeEEEeecCccc
Q psy10867 140 ---DGTICVWQLSRLI 152 (343)
Q Consensus 140 ---dg~i~iwd~~~~~ 152 (343)
-..+.+||+.+..
T Consensus 171 ~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGD 186 (318)
T ss_dssp SCBCCCEEEEETTTTE
T ss_pred CCccceEEEEcCCCCE
Confidence 2358888887753
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.54 E-value=0.22 Score=39.70 Aligned_cols=225 Identities=12% Similarity=0.066 Sum_probs=106.0
Q ss_pred eEEEEEcCCCeEEEEeCCCcccceeccc-CCcceEEEEECCCCCEEEE-ec----CC-------eEEEEEccCCceEEE-
Q psy10867 49 YVLGVEKGKPMIQAWPVNSQEKAQLRLI-CPGRISSMQASPDAAYIAV-SI----ET-------KLHMWQISSGRLLAT- 114 (343)
Q Consensus 49 ~~~~~~~~~~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~----d~-------~i~v~~~~~~~~~~~- 114 (343)
.+++.|.. .+..||..+.+....... ............++.+++. |. ++ .+.+||..+.+-...
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 45555554 488999988765432111 1122222233446666664 42 11 277888877654332
Q ss_pred -ecccCCCeEEEEEecCCCEEEEecCC-------CeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867 115 -ASSHYQPITIVKWSADSNFIVTGGED-------GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV 186 (343)
Q Consensus 115 -~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (343)
+.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-. .......|
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~----------------~p~~r~~~---- 152 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN----------------LPIKVYGH---- 152 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC----------------CSSCEESC----
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC----------------CCCccccc----
Confidence 1111111222222 56777777653 247778877653221100 00001112
Q ss_pred EEEEeecCCCceEEEEeeC------CCeEEEEecCCCceEEEeecC--CcEEEEEEcCCCCEEEEEcCCC-----cEEEE
Q psy10867 187 THVTLSKLGAKSRVASVSH------DRTCKIFDLCTGEDLLSLILD--TRLTCVAFDGTEDNIYMGTSEG-----VIKSF 253 (343)
Q Consensus 187 ~~~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d~-----~i~i~ 253 (343)
+++. .++ .+++.|+. -..+.+||+.+.+-...-..+ ..-.+++.. +++.++.|+.++ .+.+|
T Consensus 153 -~~~~-~~~--~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~y 227 (318)
T 2woz_A 153 -NVIS-HNG--MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAF 227 (318)
T ss_dssp -EEEE-ETT--EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEE
T ss_pred -EEEE-ECC--EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEE
Confidence 1222 344 66777764 245889998876533221111 111122222 466666665432 46677
Q ss_pred EeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCC--------------CcEEEEeccccee
Q psy10867 254 CLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSAD--------------ETLKIWHTISRQC 313 (343)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~i~iwd~~~~~~ 313 (343)
|+.+..=.. +..+.........+. .++++++.|+.+ ..+.+||+.+.+-
T Consensus 228 d~~~~~W~~---------~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 228 DLKTNKWEV---------MTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp ETTTCCEEE---------CCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred ECCCCeEEE---------CCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 765432110 111111111112222 356777777654 3578889877643
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.93 E-value=0.88 Score=40.83 Aligned_cols=137 Identities=11% Similarity=0.107 Sum_probs=73.0
Q ss_pred CeEEEEecCCceEEEEE-e-----cCCCCcceEEEEeC-CceEEEEEcCC------CeEEEEeCCCcccceecc--cCCc
Q psy10867 15 GAISVWEPKGGTLLMSY-K-----GASVLSPHSMCLLG-NDYVLGVEKGK------PMIQAWPVNSQEKAQLRL--ICPG 79 (343)
Q Consensus 15 g~i~iwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~~~~~~~~------~~i~iw~~~~~~~~~~~~--~~~~ 79 (343)
..+.+||..+++-...- . ......-.+++..+ ++++++.|+.+ ..+.+||..+.+....-. ....
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 45788888776543322 1 11111234455554 66666665422 357889988765443211 1111
Q ss_pred ceEEEEECCCCCEEEE-ecCC--eEEEEEccCCceEEEe-----cccCCCeEEEEEecC-CCEEEEecC--C-----CeE
Q psy10867 80 RISSMQASPDAAYIAV-SIET--KLHMWQISSGRLLATA-----SSHYQPITIVKWSAD-SNFIVTGGE--D-----GTI 143 (343)
Q Consensus 80 ~v~~~~~s~~~~~l~~-~~d~--~i~v~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~s~~~--d-----g~i 143 (343)
. .+++...++++++. |.++ .+.+||+.+.+-...- ........++.+..+ ++.++.|+. + ..+
T Consensus 492 ~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v 570 (695)
T 2zwa_A 492 R-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA 570 (695)
T ss_dssp S-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE
T ss_pred c-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE
Confidence 2 22333236776665 4332 7999999887543322 111222233555554 667777765 2 458
Q ss_pred EEeecCccc
Q psy10867 144 CVWQLSRLI 152 (343)
Q Consensus 144 ~iwd~~~~~ 152 (343)
.+||+.+..
T Consensus 571 ~~yd~~~~~ 579 (695)
T 2zwa_A 571 IIFKYDAEN 579 (695)
T ss_dssp EEEEECTTC
T ss_pred EEEEccCCc
Confidence 888988764
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.92 E-value=0.44 Score=37.26 Aligned_cols=205 Identities=11% Similarity=0.107 Sum_probs=106.2
Q ss_pred CCeEEEEecCCceEEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEE
Q psy10867 14 SGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYI 93 (343)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 93 (343)
||.|+.|-....-.+..-..... .|..++...+-.++. . ||.+..|-......+-....-...|..++...+ ..+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~-~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~-hs~ 115 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQS-GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW-ASY 115 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGS-CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT-EEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCC-CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC-EEE
Confidence 78899997543211111111122 566776654434433 3 589999976543332222222346888876643 344
Q ss_pred EEecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867 94 AVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173 (343)
Q Consensus 94 ~~~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (343)
+.. +|.|+.|-......+.........|..++...+.. ++. . ||.|..|-.........
T Consensus 116 al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~l-~-~G~v~~wG~n~~gqlg~----------------- 174 (282)
T 3qhy_B 116 ALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LAV-K-NGGVIAWGDNYFGQTTV----------------- 174 (282)
T ss_dssp EEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE-E-TTEEEEEECCTTSTTSC-----------------
T ss_pred EEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EEE-E-CCEEEEecCCCCCCCCC-----------------
Confidence 446 99999998654322111112234577776643332 332 3 69999997654321110
Q ss_pred ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867 174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 252 (343)
+ ......|..++..... .++. .||.++.|=.... +.-........|..++.-... .++.. ||.|+.
T Consensus 175 -p----~~~~~~v~~i~~G~~h---s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~ 241 (282)
T 3qhy_B 175 -P----AEAQSGVDDVAGGIFH---SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIA 241 (282)
T ss_dssp -C----GGGGSSEEEEEECSSE---EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEE
T ss_pred -c----eecCCCeEEEEecCCE---EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEE
Confidence 1 0113456667665543 4444 5999999964432 211111122346666654332 33333 899998
Q ss_pred EEeec
Q psy10867 253 FCLRQ 257 (343)
Q Consensus 253 ~d~~~ 257 (343)
|=...
T Consensus 242 wG~n~ 246 (282)
T 3qhy_B 242 WGSSR 246 (282)
T ss_dssp ESTTC
T ss_pred ecCCC
Confidence 85443
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.82 E-value=0.92 Score=40.71 Aligned_cols=198 Identities=6% Similarity=0.011 Sum_probs=98.0
Q ss_pred CCCCEEEE-ecC----CeEEEEEccCCceEEEe-c-----ccC-CCeEEEEEec-CCCEEEEecCCC------eEEEeec
Q psy10867 88 PDAAYIAV-SIE----TKLHMWQISSGRLLATA-S-----SHY-QPITIVKWSA-DSNFIVTGGEDG------TICVWQL 148 (343)
Q Consensus 88 ~~~~~l~~-~~d----~~i~v~~~~~~~~~~~~-~-----~~~-~~v~~~~~~~-~~~~l~s~~~dg------~i~iwd~ 148 (343)
.++.+++. |.+ +.+.+||+.+++-...- . ... ..-.+++..+ +++.++.|+.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 35555554 432 46889998887644332 1 011 1112333333 677778877532 4777887
Q ss_pred CccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCC--eEEEEecCCCceEEEee--
Q psy10867 149 SRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDR--TCKIFDLCTGEDLLSLI-- 224 (343)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~-- 224 (343)
.+..-.. +..+......- +++...++ .+++.|+.++ .+.+||..+.+-...-.
T Consensus 476 ~t~~W~~--------------------~~~~p~~R~~h-~~~~~~~~--~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g 532 (695)
T 2zwa_A 476 KTREWSM--------------------IKSLSHTRFRH-SACSLPDG--NVLILGGVTEGPAMLLYNVTEEIFKDVTPKD 532 (695)
T ss_dssp TTTEEEE--------------------CCCCSBCCBSC-EEEECTTS--CEEEECCBCSSCSEEEEETTTTEEEECCCSS
T ss_pred CCCcEEE--------------------CCCCCCCcccc-eEEEEcCC--EEEEECCCCCCCCEEEEECCCCceEEccCCC
Confidence 7643211 11111111111 22222355 6777777654 68999988765322111
Q ss_pred -c---CCcEEEEEEcCC-CCEEEEEcC--C-----CcEEEEEeecccc--cccccccCCCCCCccc-cccCcEEEEEEcc
Q psy10867 225 -L---DTRLTCVAFDGT-EDNIYMGTS--E-----GVIKSFCLRQVPR--TRDHHIQDSTSNPDFI-GHEKQVTSLSCSI 289 (343)
Q Consensus 225 -~---~~~i~~~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~ 289 (343)
. ......+.+..+ ++.++.|+. + ..+.+||+.+..- ...+.. +.... ...... +++...
T Consensus 533 ~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~-----~~~~p~~~R~~~-~~~~~~ 606 (695)
T 2zwa_A 533 EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIK-----KLQHPLFQRYGS-QIKYIT 606 (695)
T ss_dssp GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEE-----EEECGGGCCBSC-EEEEEE
T ss_pred CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEE-----cCCCCCCCcccc-eEEEeC
Confidence 0 111233555655 566666665 2 4588888876541 000000 00000 001111 222333
Q ss_pred CCCEEEEEeC--------CCcEEEEecccceee
Q psy10867 290 TGITLLSSSA--------DETLKIWHTISRQCL 314 (343)
Q Consensus 290 ~~~~l~s~~~--------dg~i~iwd~~~~~~~ 314 (343)
++++++.|+. ...+.+||+.+.+-.
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 3777777774 346899999876543
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.70 E-value=0.55 Score=36.71 Aligned_cols=247 Identities=10% Similarity=0.022 Sum_probs=128.5
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecc
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASS 117 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~ 117 (343)
.|..++....-. ++. . ||.+..|-......+-........|..++...+. .++.. ||.|+.|-......+..-..
T Consensus 25 ~i~~ia~G~~h~-~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l~-~G~v~~wG~n~~Gqlg~P~~ 99 (282)
T 3qhy_B 25 GVDAIAGGYFHG-LAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLALK-DGEVIAWGGNEDGQTTVPAE 99 (282)
T ss_dssp SCCEEEECSSEE-EEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEEE-TTEEEEEECCTTSTTCCCGG
T ss_pred CCcEEEeCCCeE-EEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEEE-CCEEEEeeCCCCCCCCCCcc
Confidence 566666544333 333 3 5889999765433332222223467777766443 33334 89999998654322111111
Q ss_pred cCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCc
Q psy10867 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK 197 (343)
Q Consensus 118 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 197 (343)
-...|..++...+.. + .-. ||.|..|-........ ........|..++.....
T Consensus 100 ~~~~v~~ia~G~~hs-~-al~-~G~v~~wG~n~~gqlg----------------------~~~~~~~~i~~i~~G~~~-- 152 (282)
T 3qhy_B 100 ARSGVDAIAAGAWAS-Y-ALK-DGKVIAWGDDSDGQTT----------------------VPAEAQSGVTALDGGVYT-- 152 (282)
T ss_dssp GSSSEEEEEEETTEE-E-EEE-TTEEEEEECCTTSTTS----------------------CCGGGGSSEEEEEECSSE--
T ss_pred cCCCeEEEECcCCEE-E-EEe-CCeEEEecCCCCCcCC----------------------CCccCCCCeEEEEcccCE--
Confidence 234677777754433 3 334 8999999765432110 001122446666654432
Q ss_pred eEEEEeeCCCeEEEEecCCC-ceEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccc
Q psy10867 198 SRVASVSHDRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI 276 (343)
Q Consensus 198 ~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 276 (343)
.++. . ||.+..|-.... +.-........|..++.-.+. .++. .+|.|+.|=......... +.
T Consensus 153 -~~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~-------p~---- 215 (282)
T 3qhy_B 153 -ALAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTV-------PT---- 215 (282)
T ss_dssp -EEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCC-------CG----
T ss_pred -EEEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCC-------Cc----
Confidence 3332 3 789999865432 221111123457777665432 2333 599999997655433211 11
Q ss_pred cccCcEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecccCCceEEEEEccCCCeeeecc
Q psy10867 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIHDYD 339 (343)
Q Consensus 277 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 339 (343)
.....|..++...... ++. . ||.|+.|-.....++. ....|.+++-.+.....++..
T Consensus 216 ~~~~~v~~i~~G~~h~-~al-~-~g~v~~wG~n~~gq~~---v~~~v~~iaaG~~h~~al~~~ 272 (282)
T 3qhy_B 216 EALSGVSAIASGEWYS-LAL-K-NGKVIAWGSSRTAPSS---VQSGVSSIEAGPNAAYALKGG 272 (282)
T ss_dssp GGGSSCCEEEECSSCE-EEE-E-TTEEEEESTTCCCCGG---GSSCEEEEEECSSCEEEEEC-
T ss_pred ccCCCceEEEcCCCEE-EEE-E-CCEEEEecCCCCcccc---CCCCcEEEEECcCeEEEEecC
Confidence 1123466676544432 333 3 8999999765433322 234677777666655555544
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.47 E-value=1 Score=38.12 Aligned_cols=103 Identities=11% Similarity=0.081 Sum_probs=61.5
Q ss_pred cceEEEEeCCce--EEEEEcCCCeEEEEeCCCcc---ccee----cc-----cCCcceEEEEECCC----CCEEEE-ec-
Q psy10867 38 SPHSMCLLGNDY--VLGVEKGKPMIQAWPVNSQE---KAQL----RL-----ICPGRISSMQASPD----AAYIAV-SI- 97 (343)
Q Consensus 38 ~v~~~~~~~~~~--~~~~~~~~~~i~iw~~~~~~---~~~~----~~-----~~~~~v~~~~~s~~----~~~l~~-~~- 97 (343)
....|+|.|++. ++++-.. |.|++++..... .+.. +. ........|+|+|+ +.+.++ +.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 678999999984 7777665 999999754321 1111 11 11456889999996 444443 32
Q ss_pred -C----------CeEEEEEccCC----------ceEEEec--ccCCCeEEEEEecCCCEEEEecCCC
Q psy10867 98 -E----------TKLHMWQISSG----------RLLATAS--SHYQPITIVKWSADSNFIVTGGEDG 141 (343)
Q Consensus 98 -d----------~~i~v~~~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg 141 (343)
+ ..|.-|.+..+ +.+..+. .....-..|+|.|||.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 14555665421 2222222 1123457899999998777766543
No 352
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=95.43 E-value=0.69 Score=36.00 Aligned_cols=205 Identities=12% Similarity=0.085 Sum_probs=111.8
Q ss_pred ceEEEE-ECCCCCEEEEecCCeEEE---EEccCCceEEEecccCCCeEEEEEec--CCCEEEEecCCCeEEEeecCccce
Q psy10867 80 RISSMQ-ASPDAAYIAVSIETKLHM---WQISSGRLLATASSHYQPITIVKWSA--DSNFIVTGGEDGTICVWQLSRLIC 153 (343)
Q Consensus 80 ~v~~~~-~s~~~~~l~~~~d~~i~v---~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~ 153 (343)
.+..+. .+....+++.+..|.++- |++..+.....+. ....|..+.. + +...++..+.+|.++...+....
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~- 101 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE- 101 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-
Confidence 344433 333344555567775543 4443332111132 3455666544 4 46789999999999999876642
Q ss_pred eeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCC---------CceEEEee
Q psy10867 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT---------GEDLLSLI 224 (343)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~---------~~~~~~~~ 224 (343)
...- ......+. ....+..+...... ..++..+..|.+..++... |.....+.
T Consensus 102 ~~~~---------------G~~~i~lk-egD~l~~~~~~~~~--~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~ 163 (276)
T 3no0_A 102 YKAQ---------------GMPIIKLT-EGDEVVSIASSVDE--THILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE 163 (276)
T ss_dssp TCST---------------TEECSCCC-TTCCEEEEEECCSS--CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC
T ss_pred hhcC---------------CeEEEecC-CCCEEEEEEEeCCC--CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC
Confidence 1100 00111122 22344444444444 5677888889888776532 11112233
Q ss_pred cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEE
Q psy10867 225 LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK 304 (343)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 304 (343)
....+..+...+++..++..+..|.++...+......... +.-+..+ ...+.+..+....+...++..+.+|.+.
T Consensus 164 ~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~----gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~i 238 (276)
T 3no0_A 164 KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRG----VKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAF 238 (276)
T ss_dssp TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTT----CCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCC----CcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEE
Confidence 4556777666666778999999999999988765433211 0011112 2234454444333445677777888887
Q ss_pred E--Eeccc
Q psy10867 305 I--WHTIS 310 (343)
Q Consensus 305 i--wd~~~ 310 (343)
. ++...
T Consensus 239 r~~~~~~~ 246 (276)
T 3no0_A 239 YDKINQKD 246 (276)
T ss_dssp EEEEEGGG
T ss_pred EeeeCHHH
Confidence 7 77643
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.81 E-value=1.4 Score=36.25 Aligned_cols=269 Identities=6% Similarity=-0.016 Sum_probs=121.3
Q ss_pred cceEEEEeC--CceEEEEEcCCC----eEEEEeCCCcccc-eec-----cc--------CCcceEEEEECC---CCCEEE
Q psy10867 38 SPHSMCLLG--NDYVLGVEKGKP----MIQAWPVNSQEKA-QLR-----LI--------CPGRISSMQASP---DAAYIA 94 (343)
Q Consensus 38 ~v~~~~~~~--~~~~~~~~~~~~----~i~iw~~~~~~~~-~~~-----~~--------~~~~v~~~~~s~---~~~~l~ 94 (343)
.|.+|++.| ++.+.+++.. | .|...+ +.++.- ... .. ....|.++++.| .+.+.+
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~-g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAART-GHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC---CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred ceEEEEECCCCCCeEEEEecC-CCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 799999998 6677776655 4 343332 222211 111 00 112577899986 455666
Q ss_pred EecCCeEEEEEccCCceEEEecc-------------------cCCCeEEEEEec-CCCEEEEecCCCeEEEeecCcccee
Q psy10867 95 VSIETKLHMWQISSGRLLATASS-------------------HYQPITIVKWSA-DSNFIVTGGEDGTICVWQLSRLICK 154 (343)
Q Consensus 95 ~~~d~~i~v~~~~~~~~~~~~~~-------------------~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~ 154 (343)
++..+.|...+ +.++.-..+.. ....+.+|.+.| +...++.+..++.|...+-. +..-
T Consensus 134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW 211 (394)
T 3b7f_A 134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-GTDW 211 (394)
T ss_dssp EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-TSSC
T ss_pred EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-CCCc
Confidence 66666655443 22332222211 123578899987 34455555544544433221 1111
Q ss_pred eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee--cC----Cc
Q psy10867 155 QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI--LD----TR 228 (343)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~----~~ 228 (343)
..+....... .. +.. .......+.++.+.|..+ ..+..+...+ |...+ ..++.-..+. .. ..
T Consensus 212 ~~~~~~~~~~---~~-----p~~-~~~~g~~~~~i~~~~~~~-~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~ 279 (394)
T 3b7f_A 212 KPLNRGCAAN---FL-----PDP-NVEFGHDPHCVVQHPAAP-DILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDI 279 (394)
T ss_dssp EECCTTCCCT---TS-----SSS-SSSSCBCEEEEEECSSST-TEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSC
T ss_pred eECCCCcccc---cc-----CCC-ccccCcceeEEEECCCCC-CEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccc
Confidence 1110000000 00 000 000013578899988643 3555555544 44333 2333332222 11 23
Q ss_pred EEEEEEcCC-CCEEEEEcC-----------CCcEEEEEeecccccccccccCCCCCCcccccc----CcEEEEEEccC-C
Q psy10867 229 LTCVAFDGT-EDNIYMGTS-----------EGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHE----KQVTSLSCSIT-G 291 (343)
Q Consensus 229 i~~~~~~~~-~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~-~ 291 (343)
+..++++|. ...|+++.. ++...+|............ ... +.... .....++++|. .
T Consensus 280 ~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~-~~g-----lp~~~~~~~~~~~~~~~~p~~~ 353 (394)
T 3b7f_A 280 GFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQ-DRG-----LPTDQAWLTVKRQAMTADAHAP 353 (394)
T ss_dssp EEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEE-CBT-----SCCSSCCCCCCTBSEEECCSSS
T ss_pred eEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceEC-CCC-----CCCccccceEEEEEEEECCCCC
Confidence 567888863 344555432 2334566544322221110 000 11000 01135778874 3
Q ss_pred CEEEEEeCCCcEEEEecccceeeeecc-cCCceEEEEEc
Q psy10867 292 ITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLGAFLG 329 (343)
Q Consensus 292 ~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 329 (343)
..|+.++.++.|..-+ ..|+.-..+. ....+.+++|.
T Consensus 354 ~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 354 VGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp CCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred CEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 4566676666655433 2344333333 34457777664
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.20 E-value=4.1 Score=33.29 Aligned_cols=135 Identities=6% Similarity=0.041 Sum_probs=81.2
Q ss_pred CeEEEEecCCc--eEEEEEecCCC-----CcceEEEEe---CC-----ceEEEEEcCCCeEEEEeCCCcccceecc----
Q psy10867 15 GAISVWEPKGG--TLLMSYKGASV-----LSPHSMCLL---GN-----DYVLGVEKGKPMIQAWPVNSQEKAQLRL---- 75 (343)
Q Consensus 15 g~i~iwd~~~~--~~~~~~~~~~~-----~~v~~~~~~---~~-----~~~~~~~~~~~~i~iw~~~~~~~~~~~~---- 75 (343)
-.|.+||+.+. +.++++.-... .....+++. |+ +...++-...+-|.++|+.+++.-+.+.
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 36889999999 99988775421 146677777 32 3333444445789999999876543331
Q ss_pred cC--------------CcceEEEEECCC----CCEEEEecCCeEEEEEcc-----CCc---eEEEecccC---CCeEEEE
Q psy10867 76 IC--------------PGRISSMQASPD----AAYIAVSIETKLHMWQIS-----SGR---LLATASSHY---QPITIVK 126 (343)
Q Consensus 76 ~~--------------~~~v~~~~~s~~----~~~l~~~~d~~i~v~~~~-----~~~---~~~~~~~~~---~~v~~~~ 126 (343)
.. ...+..++++|+ ++.|.-+.=..-++|.+. +.. .++.+ +.. ..-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 10 236788888887 666664322222333332 221 12222 222 2334566
Q ss_pred Ee-cCCCEEEEecCCCeEEEeecCc
Q psy10867 127 WS-ADSNFIVTGGEDGTICVWQLSR 150 (343)
Q Consensus 127 ~~-~~~~~l~s~~~dg~i~iwd~~~ 150 (343)
+. .+|.++++--....|..|+..+
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCC
Confidence 75 5777777777888999999876
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.86 E-value=0.54 Score=40.91 Aligned_cols=62 Identities=11% Similarity=0.015 Sum_probs=46.1
Q ss_pred cEEEEEEccCCCEEEEEeCC------------CcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccCC
Q psy10867 281 QVTSLSCSITGITLLSSSAD------------ETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFTP 342 (343)
Q Consensus 281 ~v~~~~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~~ 342 (343)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+. ...+++.++|+||++.|++.-.+|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQHP 552 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEECC
Confidence 35678999999966654322 245666777777766665 567899999999999999877666
No 356
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.06 E-value=5.5 Score=32.54 Aligned_cols=176 Identities=7% Similarity=0.023 Sum_probs=98.0
Q ss_pred eEEEeecCcc--ceeeeeecCCCCCCCCccccccceeeeecccccceEEEEee---cC--CCceE-EEEeeCCCeEEEEe
Q psy10867 142 TICVWQLSRL--ICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLS---KL--GAKSR-VASVSHDRTCKIFD 213 (343)
Q Consensus 142 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~~~~~-l~~~~~d~~i~~wd 213 (343)
+|.+||+.+. +.++.+.++... ......+..+.+. |. ..+.+ .++=+..+.|.++|
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~----------------~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVyd 187 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRL----------------VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYD 187 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGG----------------CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCceeEEEEECCHHh----------------cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEE
Confidence 5677788777 666665432110 1123457777777 22 11133 33434578899999
Q ss_pred cCCCceEEEee-------------------cCCcEEEEEEcCC----CCEEEEEcCCCcEEEEEeecccccccccccCCC
Q psy10867 214 LCTGEDLLSLI-------------------LDTRLTCVAFDGT----EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDST 270 (343)
Q Consensus 214 ~~~~~~~~~~~-------------------~~~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 270 (343)
+.+++..+... ....+..++++|+ ++.|+.....+. ++|.+.+...... .. ..
T Consensus 188 l~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~-~~--~~ 263 (381)
T 3q6k_A 188 HKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQK-GG--KL 263 (381)
T ss_dssp TTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSST-TC--CC
T ss_pred CCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCc-ch--hh
Confidence 99887654432 1236788999998 778877665542 3444443211110 00 11
Q ss_pred CCCcccccc---CcEEEEEEc-cCCCEEEEEeCCCcEEEEeccc-c---eeeeecc---cCCceEEEEEccCCCeeeec
Q psy10867 271 SNPDFIGHE---KQVTSLSCS-ITGITLLSSSADETLKIWHTIS-R---QCLRTIQ---HKGPVLGAFLGLLPPAIHDY 338 (343)
Q Consensus 271 ~~~~~~~~~---~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~-~---~~~~~~~---~~~~v~~~~~sp~~~~l~~~ 338 (343)
.+. ..+.. ..-..+++. .+|.++++--....|..|+..+ . +....+. .-..+..+.+.++|..-+.+
T Consensus 264 ~v~-~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 264 NPE-LLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CCE-EEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred ceE-EeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 121 12222 233456675 6788788888889999999865 1 1222222 22346788888887654444
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=90.69 E-value=1.1 Score=38.56 Aligned_cols=63 Identities=10% Similarity=0.006 Sum_probs=46.5
Q ss_pred CcEEEEEEccCCCEEEEEeC------------CCcEEEEecccceeeeecc--cCCceEEEEEccCCCeeeecccCC
Q psy10867 280 KQVTSLSCSITGITLLSSSA------------DETLKIWHTISRQCLRTIQ--HKGPVLGAFLGLLPPAIHDYDFTP 342 (343)
Q Consensus 280 ~~v~~~~~s~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~~ 342 (343)
.....|.|+++|.+.++... ...|..++..+++....+. ....++.++|+||++.|+++-.+|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 45678999999987773321 1256777777787666554 346799999999999999887666
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=90.34 E-value=9.8 Score=34.22 Aligned_cols=227 Identities=10% Similarity=0.063 Sum_probs=114.8
Q ss_pred ceEEEE-ECCCCCEEEE--ecC----CeEEEEEccCCceEE-Eec-ccCC------CeEEEEEecCCCEEEEe-------
Q psy10867 80 RISSMQ-ASPDAAYIAV--SIE----TKLHMWQISSGRLLA-TAS-SHYQ------PITIVKWSADSNFIVTG------- 137 (343)
Q Consensus 80 ~v~~~~-~s~~~~~l~~--~~d----~~i~v~~~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~l~s~------- 137 (343)
....+. ++|++++++. +.. ..++++|+.+++.+. .+. .-.. ....++|..+...+++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 344555 8999998885 333 379999999987653 121 0000 11345787444344331
Q ss_pred ---cCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce-EEEEeecCCCce---EEEEee---CCC
Q psy10867 138 ---GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV-THVTLSKLGAKS---RVASVS---HDR 207 (343)
Q Consensus 138 ---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~---~l~~~~---~d~ 207 (343)
+....|+.|.+-+..... ...+.+....+ .....++++... .+++.+ ...
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~--------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 269 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKA--------------------KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNY 269 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGC--------------------EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCE
T ss_pred CcCCCCCEEEEEECCCChHHC--------------------eEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCce
Confidence 112457777776543211 11222222222 234445555322 244433 224
Q ss_pred eEEEEecCCCc-eEEEeecCCcEEEEEEcCCCCEEEEE----------cCCCcEEEEEeeccccc----ccccccCCCCC
Q psy10867 208 TCKIFDLCTGE-DLLSLILDTRLTCVAFDGTEDNIYMG----------TSEGVIKSFCLRQVPRT----RDHHIQDSTSN 272 (343)
Q Consensus 208 ~i~~wd~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~----------~~d~~i~i~d~~~~~~~----~~~~~~~~~~~ 272 (343)
.+.+.|..... ....+..+.... +..+.++.+++.. ...+.|...|+...... .. .
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~ 340 (711)
T 4hvt_A 270 DNYILDTKYKNLKLQKINMPSDAT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS--------L 340 (711)
T ss_dssp EEEEEECSSSSCEEEECCSCTTCE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT--------C
T ss_pred eEEEEcCCCCCCcceEeecCCcce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccccc--------c
Confidence 56666654321 223333322222 2233445444422 14677888888764210 10 1
Q ss_pred Cc-c-ccccCcEEEEEEccCCCEEEEEeCCC--cEEEEecccce-eeee-cc--cCCceEEEEEccCCCeee
Q psy10867 273 PD-F-IGHEKQVTSLSCSITGITLLSSSADE--TLKIWHTISRQ-CLRT-IQ--HKGPVLGAFLGLLPPAIH 336 (343)
Q Consensus 273 ~~-~-~~~~~~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~-~~~~-~~--~~~~v~~~~~sp~~~~l~ 336 (343)
.. + ......+..+.+..+ .++++...++ .|+++++.+++ .... +. ..+.+.....++++..++
T Consensus 341 ~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 341 KILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEAL 411 (711)
T ss_dssp EEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred eEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEE
Confidence 11 1 123346778888865 5667777776 46778876665 2333 33 235677777777776554
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.05 E-value=12 Score=34.95 Aligned_cols=38 Identities=29% Similarity=0.312 Sum_probs=32.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777788888899999999999999999999887753
No 360
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=89.32 E-value=7.1 Score=31.11 Aligned_cols=184 Identities=10% Similarity=0.007 Sum_probs=98.1
Q ss_pred cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCe
Q psy10867 129 ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRT 208 (343)
Q Consensus 129 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 208 (343)
|+...+++.+.+|.|+--.+........ ....+. ....+..+...... ..++..+..|.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~------------------~~~~lk-e~D~l~~~~~~~t~--d~ll~fT~~Gr 61 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNG------------------QDFAMK-DTDRLLAMLEMNTK--DVLLLFTNKGN 61 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTT------------------CCCCCC-TTCCEEEEEEEETT--SEEEEEETTSE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCc------------------cccccC-CCCEEEEEEEECCC--CEEEEEECCCE
Confidence 5667888999999998776553311000 001112 22334444444444 46666777787
Q ss_pred EEEEe---cCCC------ceE---EEeecCCcEEEEEEcC---CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCC
Q psy10867 209 CKIFD---LCTG------EDL---LSLILDTRLTCVAFDG---TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNP 273 (343)
Q Consensus 209 i~~wd---~~~~------~~~---~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 273 (343)
++-+. ++.. .++ ..+.....|..+..-+ ++.+++..+.+|.++...+........ ..+....
T Consensus 62 ~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r---~~G~~ai 138 (323)
T 1wp5_A 62 YLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY---SKPLTGI 138 (323)
T ss_dssp EEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC---SSCEECS
T ss_pred EEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc---cCceEEE
Confidence 65544 3322 211 1122344566554333 266899999999999998876544321 0111122
Q ss_pred ccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecccc---------eeeeecccCCceEEEEEccCCC-eeee
Q psy10867 274 DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISR---------QCLRTIQHKGPVLGAFLGLLPP-AIHD 337 (343)
Q Consensus 274 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~v~~~~~sp~~~-~l~~ 337 (343)
.+... +.+..+........++..+.+|.+..+....- -....+.....|.++..-+++. .|+.
T Consensus 139 ~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~ 211 (323)
T 1wp5_A 139 NLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVV 211 (323)
T ss_dssp CCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEE
T ss_pred EeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEE
Confidence 23322 44555554445567888888998888876431 1222233445566665444443 4443
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=88.06 E-value=8.5 Score=30.47 Aligned_cols=195 Identities=12% Similarity=0.077 Sum_probs=106.2
Q ss_pred CCceEEEEEcCCCeEEEEeCCCcccce--------ecccCCcceEEEE-ECCCCCEEEEecCCeEEEEEccCCceE----
Q psy10867 46 GNDYVLGVEKGKPMIQAWPVNSQEKAQ--------LRLICPGRISSMQ-ASPDAAYIAVSIETKLHMWQISSGRLL---- 112 (343)
Q Consensus 46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~--------~~~~~~~~v~~~~-~s~~~~~l~~~~d~~i~v~~~~~~~~~---- 112 (343)
|+..+++..+.+|.|+--.+..-+... ......+.+..+. .+....+++.+..|.++-.....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 455556666666999877554322111 0011223343333 334445555677887666654321110
Q ss_pred --------EEecccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc
Q psy10867 113 --------ATASSHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ 181 (343)
Q Consensus 113 --------~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
..+. ....|..+...+ +..+++..+..|.++...+......... ......+..
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~---------------G~~~i~L~~ 149 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSR---------------GVIVIKLND 149 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC-------------------CEECBCCCT
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCC---------------cEEEEecCC
Confidence 0122 123455554333 4567888899999999887654221100 011122233
Q ss_pred cccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ceEEE--eecCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867 182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------EDLLS--LILDTRLTCVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 182 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 252 (343)
...+..+...... ..++..+.+|.+..+....- +-+.. +.....+..+..-.++..+++.+..|..+.
T Consensus 150 -~d~lv~~~~~~~~--~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr 226 (312)
T 1suu_A 150 -KDFVTSAEIVFKD--EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKR 226 (312)
T ss_dssp -TCCEEEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEE
T ss_pred -CCEEEEEEEeCCC--CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEE
Confidence 4455555555434 56888889999988876531 11222 223455667666666777888899999999
Q ss_pred EEeeccc
Q psy10867 253 FCLRQVP 259 (343)
Q Consensus 253 ~d~~~~~ 259 (343)
.++....
T Consensus 227 ~~~~e~~ 233 (312)
T 1suu_A 227 LNMSKIS 233 (312)
T ss_dssp EEGGGSC
T ss_pred EEHHHhc
Confidence 9887653
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.75 E-value=2.6 Score=37.49 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=29.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
.|.++.+ +..++++-+.|.++|+|++.+++++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555544 46799999999999999999999887765
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.58 E-value=19 Score=33.81 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=32.1
Q ss_pred ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI 224 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 224 (343)
.+.+++..++. .++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~--~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTT--TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCC--cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46667777776 799999999999999999999888764
No 364
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.22 E-value=11 Score=30.84 Aligned_cols=68 Identities=7% Similarity=0.007 Sum_probs=38.0
Q ss_pred CcceEEEEECC--CCCEEEEecCC----eEEEEEccCCceEEEecc--------------cCCCeEEEEEec-C-CCEEE
Q psy10867 78 PGRISSMQASP--DAAYIAVSIET----KLHMWQISSGRLLATASS--------------HYQPITIVKWSA-D-SNFIV 135 (343)
Q Consensus 78 ~~~v~~~~~s~--~~~~l~~~~d~----~i~v~~~~~~~~~~~~~~--------------~~~~v~~~~~~~-~-~~~l~ 135 (343)
...|.+|++.| ++.+.+++..+ .|...+ +.++.-..+.. ....|.++++.| + ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 45799999998 66777766555 444332 33332222211 112477888887 2 45666
Q ss_pred EecCCCeEEEe
Q psy10867 136 TGGEDGTICVW 146 (343)
Q Consensus 136 s~~~dg~i~iw 146 (343)
.++..+.|...
T Consensus 133 ~g~~~ggl~~S 143 (394)
T 3b7f_A 133 AGTSPQGLFRS 143 (394)
T ss_dssp EEEETTEEEEE
T ss_pred EEecCCcEEEE
Confidence 66655655544
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=87.04 E-value=10 Score=30.27 Aligned_cols=232 Identities=10% Similarity=0.056 Sum_probs=123.0
Q ss_pred cceEEEEE-CCCCCEEEEecCCeEEEEE---ccCC------ceEEE-ec-ccCCCeEEEEEec---CCCEEEEecCCCeE
Q psy10867 79 GRISSMQA-SPDAAYIAVSIETKLHMWQ---ISSG------RLLAT-AS-SHYQPITIVKWSA---DSNFIVTGGEDGTI 143 (343)
Q Consensus 79 ~~v~~~~~-s~~~~~l~~~~d~~i~v~~---~~~~------~~~~~-~~-~~~~~v~~~~~~~---~~~~l~s~~~dg~i 143 (343)
+.+..+.. +....+|+.+..|.++-.. +... ..+.. +. .....|..+...+ +..+++..+.+|.+
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~i 121 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLV 121 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEE
Confidence 34444433 3344455557777655444 3322 22111 11 1234565554433 46789999999999
Q ss_pred EEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC--CCc---
Q psy10867 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC--TGE--- 218 (343)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~--- 218 (343)
+.-.+........- ......+.. ...+..+...... ..++..+..|.+..+... .-.
T Consensus 122 Kr~~l~~~~~~~r~---------------G~~~i~lke-~D~lv~~~~~~~~--d~ill~T~~G~~~rf~~~~~eip~~g 183 (327)
T 3uc1_A 122 KKSKLTDFDSNRSG---------------GIVAVNLRD-NDELVGAVLCSAG--DDLLLVSANGQSIRFSATDEALRPMG 183 (327)
T ss_dssp EEEEGGGGCCCCSS---------------CEESCBCCT-TCCEEEEEEECTT--CEEEEEETTSEEEEEECCTTTSCCCC
T ss_pred EEeEHHHhhccccC---------------ceEEEEECC-CCEEEEEEEecCC--CEEEEEECCCeEEEEECcccccCcCC
Confidence 99887664321100 001112222 3444445444444 567778888888877665 211
Q ss_pred ------eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCC
Q psy10867 219 ------DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI 292 (343)
Q Consensus 219 ------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 292 (343)
....+.....|.++...+++.+++..+..|.++.-.+........- ..+.....+....+.+..+....+..
T Consensus 184 r~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~--~~G~~~~~l~~~~d~lv~~~~~~~~~ 261 (327)
T 3uc1_A 184 RATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRG--GKGVLTVMYDRRRGRLVGALIVDDDS 261 (327)
T ss_dssp TTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTT--SCCEESSCCCTTTCSEEEEEEECTTC
T ss_pred cCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcC--CCcEEEEEecCCCCeEEEEEEeCCCc
Confidence 1112234556777777777789999999999999887765432210 00111112222123444444444445
Q ss_pred EEEEEeCCCcEEEEecccc---------eeeeecccCCceEEEEEcc
Q psy10867 293 TLLSSSADETLKIWHTISR---------QCLRTIQHKGPVLGAFLGL 330 (343)
Q Consensus 293 ~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~v~~~~~sp 330 (343)
.++..+.+|.+.-++...- -.+..+.....|.++...+
T Consensus 262 ~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~ 308 (327)
T 3uc1_A 262 ELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNA 308 (327)
T ss_dssp EEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC
T ss_pred cEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcC
Confidence 6666777888777765432 1222233455666665544
No 366
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=84.83 E-value=13 Score=29.55 Aligned_cols=244 Identities=9% Similarity=0.069 Sum_probs=122.5
Q ss_pred CCceEEEEEcCCCeEEEEeCCCccc---c-eecccCCcceEE-EEECCCCCEEEEecCCeEEEEEcc---C------Cce
Q psy10867 46 GNDYVLGVEKGKPMIQAWPVNSQEK---A-QLRLICPGRISS-MQASPDAAYIAVSIETKLHMWQIS---S------GRL 111 (343)
Q Consensus 46 ~~~~~~~~~~~~~~i~iw~~~~~~~---~-~~~~~~~~~v~~-~~~s~~~~~l~~~~d~~i~v~~~~---~------~~~ 111 (343)
|+..+++..+.+|.|+--.+..-+. . ..+.. .+.+.. +..+....+++.+..|.++-+... . |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 4555666666668888665432211 0 11222 233433 334445556666788876655542 2 221
Q ss_pred EEE-ec-ccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccce
Q psy10867 112 LAT-AS-SHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPV 186 (343)
Q Consensus 112 ~~~-~~-~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (343)
+.. +. .....|..+...+ ++.+++..+.+|.++...+........ . .......+... ..+
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r-~-------------~G~~ai~l~e~-d~l 146 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-S-------------KPLTGINLKND-DQV 146 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-S-------------SCEECSCCCTT-CCE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc-c-------------CceEEEEeCCC-CEE
Confidence 111 11 1223465544333 256788999999999988765432110 0 00011112222 444
Q ss_pred EEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ceEEEe--ecCCcEEEEEEcCCCC-EEEEEcCCCcEEEEEee
Q psy10867 187 THVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------EDLLSL--ILDTRLTCVAFDGTED-NIYMGTSEGVIKSFCLR 256 (343)
Q Consensus 187 ~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~~~~~--~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~ 256 (343)
-.+...... ..++..+.+|.+..+....- +-+.-+ .....+.++...+++. .+++.+..|..+..++.
T Consensus 147 v~~~~~~~~--~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 147 VDVHLTDGM--NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EEEEEECSC--SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCC--CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 444444434 46777888898888876421 112222 2344566665544455 78888889998888776
Q ss_pred cccccccccccCCCC-CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 257 QVPRTRDHHIQDSTS-NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 257 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
.......- ..+.. ...+......+..+....++..++..+.+|.+.-..+.
T Consensus 225 e~~~~~Rg--~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 225 EFEKATRA--KRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp GSCCCCTT--SCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred HccccCCC--CCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 63221110 00000 11122222244433332334456666777777666654
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.19 E-value=3.6 Score=39.37 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=30.9
Q ss_pred ceEEEEeecCCCceEEEEeeCCCeEEEEecCCCceEEEee
Q psy10867 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI 224 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 224 (343)
.+.+++..++. .++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~--~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT--TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc--cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455556666 789999999999999999999988765
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=83.28 E-value=15 Score=29.02 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=111.5
Q ss_pred CCCCEEE-EecCCeEEEEEccCCce-------EE--EecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeee
Q psy10867 88 PDAAYIA-VSIETKLHMWQISSGRL-------LA--TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV 157 (343)
Q Consensus 88 ~~~~~l~-~~~d~~i~v~~~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 157 (343)
++..+++ .+.+|.|+-..+..-+. +. .++. .+.+..+........++..+..|.++-+....-.....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 3444444 47888888877654321 11 1222 234555555556667777888898777665432111000
Q ss_pred ecCCCCCCCCccccccceeeeecccccceEEEEeec---CCCceEEEEeeCCCeEEEEecCCCc-------eEEEeecCC
Q psy10867 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK---LGAKSRVASVSHDRTCKIFDLCTGE-------DLLSLILDT 227 (343)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~~ 227 (343)
. .+.. .. ....+. ....|..+...+ .. .+++..+..|.++...+.... ....+....
T Consensus 85 ~------~G~~---i~-~~l~l~-~~e~i~~~~~~~~~~~~--~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d 151 (312)
T 1suu_A 85 S------KGQN---IS-ELINLG-DQEEILTIKNSKDLTDD--AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKD 151 (312)
T ss_dssp ---------CB---GG-GTSCCC-TTCCEEEEEEESCCCTT--CEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTC
T ss_pred C------CCcC---hh-hccCCC-CCCEEEEEEEeccCCCC--CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCC
Confidence 0 0000 00 011112 223344443332 23 578888999999988775332 122223345
Q ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy10867 228 RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307 (343)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 307 (343)
.+..+.....+..++..+.+|.+..+.......... ...+.....+.. ...|.++..-.++..+++.+..|..+..+
T Consensus 152 ~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR--~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~ 228 (312)
T 1suu_A 152 FVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNR--GTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLN 228 (312)
T ss_dssp CEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT--TBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCC--CCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEE
Confidence 566666655667888899999999998876322211 011222223332 34566665545566788889999999988
Q ss_pred ccc
Q psy10867 308 TIS 310 (343)
Q Consensus 308 ~~~ 310 (343)
+..
T Consensus 229 ~~e 231 (312)
T 1suu_A 229 MSK 231 (312)
T ss_dssp GGG
T ss_pred HHH
Confidence 753
No 369
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.27 E-value=20 Score=30.30 Aligned_cols=52 Identities=6% Similarity=0.028 Sum_probs=35.6
Q ss_pred cceEEEEECCCCC--EEEEecCCeEEEEEccCC---ceEEEec---------ccCCCeEEEEEecC
Q psy10867 79 GRISSMQASPDAA--YIAVSIETKLHMWQISSG---RLLATAS---------SHYQPITIVKWSAD 130 (343)
Q Consensus 79 ~~v~~~~~s~~~~--~l~~~~d~~i~v~~~~~~---~~~~~~~---------~~~~~v~~~~~~~~ 130 (343)
.....|+|.||+. +|++...|.|++++.... +.+..+. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4557899999985 888888899999975422 1222221 11356789999985
No 370
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=83.25 E-value=16 Score=29.17 Aligned_cols=124 Identities=12% Similarity=0.086 Sum_probs=76.0
Q ss_pred cceEEEEeecC-CCceEEEEeeCCCeEEEEecCCCce-------EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEe
Q psy10867 184 LPVTHVTLSKL-GAKSRVASVSHDRTCKIFDLCTGED-------LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCL 255 (343)
Q Consensus 184 ~~v~~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 255 (343)
..|..+...++ .+..+++..+.+|.++--.+..... ...+.....+..+........|+..+..|.+..+..
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~ 174 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSA 174 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEC
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEEC
Confidence 44555443332 1126899999999999887654322 122233455666666666778888899999999888
Q ss_pred e--cccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 256 R--QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
. ....... ...+.....+. ....|.++...+++.+++..+..|.++.-.+..
T Consensus 175 ~~~eip~~gr--~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 175 TDEALRPMGR--ATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CTTTSCCCCT--TSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred cccccCcCCc--CCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 7 3222111 01111122333 244576766666667899999999999887653
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.78 E-value=2.9 Score=39.98 Aligned_cols=38 Identities=29% Similarity=0.312 Sum_probs=31.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEecccceeeeecc
Q psy10867 281 QVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 281 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 318 (343)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455667788899999999999999999999888754
No 372
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=82.01 E-value=17 Score=28.66 Aligned_cols=243 Identities=11% Similarity=0.027 Sum_probs=122.8
Q ss_pred CCceEEEEEcCCCeEEEEeCCCcccce---------ecccCCcceE-EEEECCCCCEEEEecCCeEEEEEcc---CC---
Q psy10867 46 GNDYVLGVEKGKPMIQAWPVNSQEKAQ---------LRLICPGRIS-SMQASPDAAYIAVSIETKLHMWQIS---SG--- 109 (343)
Q Consensus 46 ~~~~~~~~~~~~~~i~iw~~~~~~~~~---------~~~~~~~~v~-~~~~s~~~~~l~~~~d~~i~v~~~~---~~--- 109 (343)
|+..+++..+.+|.|+--.+..-+... .+.. .+.+. .+..+....+++.+..|.++-+... ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 344555566666888766554322111 1112 23333 3333444556666777876555542 21
Q ss_pred ---ceEE---EecccCCCeEEEEEe---cCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867 110 ---RLLA---TASSHYQPITIVKWS---ADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS 180 (343)
Q Consensus 110 ---~~~~---~~~~~~~~v~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
..+. .+. ....|..+... +++.+++..+.+|.++.-.+........ .......+.
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r---------------~G~~~i~l~ 143 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT---------------AGKVAIKLV 143 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT---------------TCEESSCCC
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc---------------CCeEEEEEC
Confidence 1111 122 23456555442 3456788899999999987764322110 000111122
Q ss_pred ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-------eEE--EeecCCcEEEEEEcCCCCEEEEEcCCCcEE
Q psy10867 181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-------DLL--SLILDTRLTCVAFDGTEDNIYMGTSEGVIK 251 (343)
Q Consensus 181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 251 (343)
.+ ..+..+...... ..++..+.+|.+..++...-. -+. .+.....+..+...+++..+++.+..|.++
T Consensus 144 ~~-d~lv~~~~~~~~--~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~K 220 (307)
T 1zi0_A 144 DG-DELIGVDLTSGE--DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGK 220 (307)
T ss_dssp TT-CCEEEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEE
T ss_pred CC-CEEEEEEEeCCC--CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceE
Confidence 23 444444444443 467777888888877664211 112 223345677776656667888889999999
Q ss_pred EEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 252 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
..++........- ..+.....+....+.+-.+....+...++..+.+|.+.-+++..
T Consensus 221 r~~~~e~~~~~Rg--~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 221 RTAVAEYPTKSRA--TKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EECGGGSCCCCTT--SCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEEHHHhccCCCC--CCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 8887654321110 01111222333334554444433445566667777776666543
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=81.81 E-value=29 Score=31.15 Aligned_cols=36 Identities=11% Similarity=0.338 Sum_probs=29.9
Q ss_pred eEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeec
Q psy10867 122 ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF 159 (343)
Q Consensus 122 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 159 (343)
|.++.+ +..++++-+.|.++|+|++.++.+..+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 577999999999999999999998888776
No 374
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=80.57 E-value=22 Score=28.97 Aligned_cols=265 Identities=11% Similarity=0.041 Sum_probs=132.8
Q ss_pred eCCceEEEEEcCCCeEEEEeCCCcc--------cceecccCCcceEEEEECCC-CCEEEEecCCeEEEEEc---cC----
Q psy10867 45 LGNDYVLGVEKGKPMIQAWPVNSQE--------KAQLRLICPGRISSMQASPD-AAYIAVSIETKLHMWQI---SS---- 108 (343)
Q Consensus 45 ~~~~~~~~~~~~~~~i~iw~~~~~~--------~~~~~~~~~~~v~~~~~s~~-~~~l~~~~d~~i~v~~~---~~---- 108 (343)
-|+..+++..+.+|.|+--.+..-+ .........+.+..+..... ..+|+.+..|.++-+.. ..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 3566666666677999875433211 11111123444554444333 34555677776665543 22
Q ss_pred --CceEE---EecccCCCeEEEEEec---CCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeec
Q psy10867 109 --GRLLA---TASSHYQPITIVKWSA---DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKS 180 (343)
Q Consensus 109 --~~~~~---~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
|..+. .+. ....|.++...+ +..+|+.++..|.++...+........ . ......+.
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~----------~-----G~~ai~L~ 147 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLA----------R-----GKIAINLD 147 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCT----------T-----CEESSCCC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccC----------C-----ceEEEEeC
Confidence 11111 122 234565554432 456899999999999988765432110 0 00111122
Q ss_pred ccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc-------eEEE--eecCCcEEEEEEcC---------------
Q psy10867 181 QHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE-------DLLS--LILDTRLTCVAFDG--------------- 236 (343)
Q Consensus 181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~~--~~~~~~i~~~~~~~--------------- 236 (343)
. ...+-.+...... ..++..+..|.+..++...-. -+.- +.....|.++...+
T Consensus 148 ~-~d~lv~v~~~~~~--~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~ 224 (370)
T 3l6v_A 148 E-GDALVGVALTDGD--RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAE 224 (370)
T ss_dssp T-TCCEEEEEEECSC--CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-------------
T ss_pred C-CCEEEEEEEeCCC--ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccc
Confidence 2 3344444444433 467777888888777654211 1121 22344555555444
Q ss_pred --------------------CCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEccCCCEEEE
Q psy10867 237 --------------------TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS 296 (343)
Q Consensus 237 --------------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 296 (343)
++..+++.+..|..+...+........- ..+.....+....+.+..+.+..+...++.
T Consensus 225 ~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg--~kGv~~~k~~~~~g~lv~~~~v~~~d~i~l 302 (370)
T 3l6v_A 225 EVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRG--TQGVIGIQTTERNGKLVRAVLLGSTDEVML 302 (370)
T ss_dssp ----------------------CEEEEEETTSEEEEEEGGGSCCBCTT--SCCEESSCCCTTTCSEEEEEEECTTCEEEE
T ss_pred ccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccC--CcceEEEEecCCCCcEEEEEEeCCCceEEE
Confidence 4568999999999999988765432211 001111222222344555443334445555
Q ss_pred EeCCCcEEEEeccc---------ceeeeecccCCceEEEEEcc
Q psy10867 297 SSADETLKIWHTIS---------RQCLRTIQHKGPVLGAFLGL 330 (343)
Q Consensus 297 ~~~dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~~sp 330 (343)
.+..|.+.-..+.. |-.+..+.....|.+++.-+
T Consensus 303 iT~~G~~iR~~v~~i~~~gR~t~Gv~li~l~~~~~v~~v~~~~ 345 (370)
T 3l6v_A 303 ISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLD 345 (370)
T ss_dssp EETTCCEEEEEGGGSCBCCSSSCCEESSCCCTTCCEEEEEEEC
T ss_pred EcCCCeEEEeeHhhCCccCCCCCCeEEEecCCCCEEEEEEEcc
Confidence 66677666555432 22233333455666665543
No 375
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.87 E-value=13 Score=32.31 Aligned_cols=59 Identities=8% Similarity=0.079 Sum_probs=42.9
Q ss_pred cceEEEEECCCCCEEEEec-------------CCeEEEEEccCCceEEEeccc-CCCeEEEEEecCCCEEEEe
Q psy10867 79 GRISSMQASPDAAYIAVSI-------------ETKLHMWQISSGRLLATASSH-YQPITIVKWSADSNFIVTG 137 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~~-------------d~~i~v~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~ 137 (343)
.....|.|.++|.+.++.. .+.+..++..+++....+... ...++.++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 3467899999998877421 126777777778776666543 3568999999999988765
No 376
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=76.69 E-value=30 Score=28.33 Aligned_cols=228 Identities=10% Similarity=0.069 Sum_probs=111.4
Q ss_pred CCeEEEEecCC-ce----------EEEEEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc-----------
Q psy10867 14 SGAISVWEPKG-GT----------LLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA----------- 71 (343)
Q Consensus 14 dg~i~iwd~~~-~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~----------- 71 (343)
||.|+.|-... |+ ....+.......+..++++......++-..+|.|..|-......+
T Consensus 71 ~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p 150 (389)
T 3kci_A 71 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 150 (389)
T ss_dssp TSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEE
T ss_pred CCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCC
Confidence 68899985432 11 112222222224455666554444444445588999954432111
Q ss_pred eecc-cCCcceEEEEECCCCCEEEEecCCeEEEEEccCC-c----------eEEEecc-cCCCeEEEEEecCCCEEEEec
Q psy10867 72 QLRL-ICPGRISSMQASPDAAYIAVSIETKLHMWQISSG-R----------LLATASS-HYQPITIVKWSADSNFIVTGG 138 (343)
Q Consensus 72 ~~~~-~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~-~----------~~~~~~~-~~~~v~~~~~~~~~~~l~s~~ 138 (343)
.... .....|..++.. ....++...+|.|+.|-.... + ....+.. ....|..++........+.-.
T Consensus 151 ~~v~~l~~~~i~~va~G-~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~ 229 (389)
T 3kci_A 151 RVIESLRGIEVVDVAAG-GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 229 (389)
T ss_dssp EECGGGTTSCEEEEEEC-SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEE
T ss_pred eEecccCCCeEEEEEeC-cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEc
Confidence 1111 112256666654 334455578899999975321 1 1111221 223566666543334555667
Q ss_pred CCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-
Q psy10867 139 EDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG- 217 (343)
Q Consensus 139 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~- 217 (343)
.||.|..|-......... ... .....+..........|..++.-.. ..+.-..+|.|+.|=....
T Consensus 230 ~~G~v~~wG~n~~GqLG~--------g~~--~~~~~p~~v~~~~~~~v~~v~~G~~----hs~alt~~G~v~~wG~n~~G 295 (389)
T 3kci_A 230 DDDTVWSWGDGDYGKLGR--------GGS--DGCKVPMKIDSLTGLGVVKVECGSQ----FSVALTKSGAVYTWGKGDYH 295 (389)
T ss_dssp TTTEEEEEECCGGGTTSS--------SSC--CCEEEEEECGGGTTSCEEEEEEETT----EEEEEETTSCEEEEECCGGG
T ss_pred cCCEEEEEeCCCCCCCCC--------CCC--CCccccEEecccCCCcEEEEeCCCC----EEEEEeCCCeEEEEeCCCCC
Confidence 889999997654211100 000 0000122211112234666665443 3444568899999954321
Q ss_pred -------ce---EEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecc
Q psy10867 218 -------ED---LLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258 (343)
Q Consensus 218 -------~~---~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 258 (343)
.. ...+. ....|..++.- ....++-..||.|+.|=....
T Consensus 296 qLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 296 RLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp TTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTT
T ss_pred CCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCCC
Confidence 11 11111 12346665543 344555578999999976653
No 377
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.60 E-value=24 Score=27.28 Aligned_cols=165 Identities=16% Similarity=0.155 Sum_probs=96.4
Q ss_pred CCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeec--CCCc
Q psy10867 120 QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK--LGAK 197 (343)
Q Consensus 120 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~ 197 (343)
+.+..+.-......|+.-+..|.++--.+........ ..+ +. ....|..+.. + +.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~-----------------~~l--l~-~~e~i~~v~~-~~~~~-- 80 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSK-----------------VSL--KS-REEKIVGAFI-REKFG-- 80 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEE-----------------CCC--SS-TTCCEEEEEE-GGGSC--
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcc-----------------ccc--CC-CCCEEEEEEC-CcCCC--
Confidence 3455555555556666677778766543322100000 011 22 3445555543 3 23
Q ss_pred eEEEEeeCCCeEEEEecCCCc------eEEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCC
Q psy10867 198 SRVASVSHDRTCKIFDLCTGE------DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTS 271 (343)
Q Consensus 198 ~~l~~~~~d~~i~~wd~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 271 (343)
.+++..+.+|.++-..+.... ....+.....+..+........++..+..|.+..++.......... ..+..
T Consensus 81 ~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~--a~Gv~ 158 (276)
T 3no0_A 81 NRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPG--ARGVQ 158 (276)
T ss_dssp SEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTT--CCCEE
T ss_pred CEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCC--CCCEE
Confidence 689999999999998765432 1122233456666666666778999999999999987654332110 01111
Q ss_pred CCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q psy10867 272 NPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 272 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
...+.. ...|..+...+++..++..+..|.++...+..
T Consensus 159 ~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 159 GIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred EEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 223332 34566665555667888999999999888653
No 378
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.08 E-value=19 Score=31.46 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=40.7
Q ss_pred ceEEEEeecCCCceEEEEeeC------------CCeEEEEecCCCceEEEee--cCCcEEEEEEcCCCCEEEEE
Q psy10867 185 PVTHVTLSKLGAKSRVASVSH------------DRTCKIFDLCTGEDLLSLI--LDTRLTCVAFDGTEDNIYMG 244 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~------------d~~i~~wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~ 244 (343)
..-.|+|+|.| .+++.-.. ...+.+.+..+++..+.+. ....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G--~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAG--RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTC--CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCC--CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45678999998 55554322 1346667777777665554 46779999999999988875
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=69.03 E-value=25 Score=29.96 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=45.1
Q ss_pred ceEEEEeecC----CCceEEEEeeCCCeEEEEec-CCCc-------eEEEee---cCCcEEEEEEcCCCCEEEEEcCCCc
Q psy10867 185 PVTHVTLSKL----GAKSRVASVSHDRTCKIFDL-CTGE-------DLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGV 249 (343)
Q Consensus 185 ~v~~~~~~~~----~~~~~l~~~~~d~~i~~wd~-~~~~-------~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~ 249 (343)
..++|+...- +....++.|+.+|.|.-.-+ ..+. .+.++. .+.+|..+.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4677776643 54467888999998754332 2221 222333 3578999999999999999998876
Q ss_pred EEE
Q psy10867 250 IKS 252 (343)
Q Consensus 250 i~i 252 (343)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 380
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=68.98 E-value=46 Score=27.17 Aligned_cols=210 Identities=11% Similarity=0.088 Sum_probs=101.2
Q ss_pred ceEEEEECCCCC-EEEEecCCeEEEEEccCC-----------ceEEEeccc-CCCeEEEEEecCCCEEEEecCCCeEEEe
Q psy10867 80 RISSMQASPDAA-YIAVSIETKLHMWQISSG-----------RLLATASSH-YQPITIVKWSADSNFIVTGGEDGTICVW 146 (343)
Q Consensus 80 ~v~~~~~s~~~~-~l~~~~d~~i~v~~~~~~-----------~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iw 146 (343)
.+..++.+.... .++...+|.|+.|-.... .....+... ...|..++.. ....+....+|.|..|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 345556655444 444578999999964321 011122221 2256666653 3445555678999999
Q ss_pred ecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-c-------
Q psy10867 147 QLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-E------- 218 (343)
Q Consensus 147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~------- 218 (343)
-....-.... ... .....+..........|..++..... ...+....||.|+.|-.... +
T Consensus 184 G~n~~GqLG~--------~~~--~~~~~p~~v~~~~~~~v~~ia~G~g~--~~t~~l~~~G~v~~wG~n~~GqLG~g~~~ 251 (389)
T 3kci_A 184 GKGRYGRLGH--------SDS--EDQLKPKLVEALQGHRVVDIACGSGD--AQTLCLTDDDTVWSWGDGDYGKLGRGGSD 251 (389)
T ss_dssp ECCGGGTTCS--------SSC--CCEEEEEECGGGTTSCEEEEEECCSS--CEEEEEETTTEEEEEECCGGGTTSSSSCC
T ss_pred CCCCCCCcCC--------CCC--cccccceEecccCCCeEEEEEEcCCC--cEEEEEccCCEEEEEeCCCCCCCCCCCCC
Confidence 7654211100 000 00011222212223456666654422 35556678899999954321 1
Q ss_pred ---eEEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc---CCCCCCccccccCcEEEEEEccC
Q psy10867 219 ---DLLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ---DSTSNPDFIGHEKQVTSLSCSIT 290 (343)
Q Consensus 219 ---~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~ 290 (343)
....+. ....|..++.- ....++-..+|.|+.|=.........-... ....+..+ ....|..++..
T Consensus 252 ~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l--~~~~v~~ia~G-- 325 (389)
T 3kci_A 252 GCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATG-- 325 (389)
T ss_dssp CEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG--TTCCEEEEEEC--
T ss_pred CccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccC--CCCCEEEEEec--
Confidence 111111 12246555554 344455567899999976543322110000 00001111 12345555543
Q ss_pred CCEEEEEeCCCcEEEEecc
Q psy10867 291 GITLLSSSADETLKIWHTI 309 (343)
Q Consensus 291 ~~~l~s~~~dg~i~iwd~~ 309 (343)
....+.-..||.|+.|-..
T Consensus 326 ~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 326 SLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred cCeEEEECCCCCEEEeeCC
Confidence 3345556788999999754
No 381
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=68.64 E-value=48 Score=27.29 Aligned_cols=160 Identities=11% Similarity=0.065 Sum_probs=78.2
Q ss_pred cceEEEEECCCCCEEEEecCCeEEEEEccCCceE----------------------EEecc------cCCCeEEEEEecC
Q psy10867 79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRLL----------------------ATASS------HYQPITIVKWSAD 130 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~----------------------~~~~~------~~~~v~~~~~~~~ 130 (343)
..|..++.- ....++...+|.|+.|-....-.+ ..+.. ....|..++....
T Consensus 164 ~~i~~ia~G-~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~ 242 (413)
T 1a12_A 164 VPVVKVASG-NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY 242 (413)
T ss_dssp SCEEEEEEC-SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETT
T ss_pred CCEEEEEec-CceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeCCC
Confidence 456666654 233455578899999975432100 00110 1235666665433
Q ss_pred CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeee--ecccccceEEEEeecCCCceEEEEeeCCCe
Q psy10867 131 SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV--KSQHSLPVTHVTLSKLGAKSRVASVSHDRT 208 (343)
Q Consensus 131 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 208 (343)
..+.-..+|.|..|-......... ... .....+... +......|..++.... ..+.-..+|.
T Consensus 243 --hs~alt~~G~v~~wG~n~~gqLG~--------~~~--~~~~~P~~v~~l~~~~~~v~~ia~G~~----hs~al~~~G~ 306 (413)
T 1a12_A 243 --FTFAISHEGHVYGFGLSNYHQLGT--------PGT--ESCFIPQNLTSFKNSTKSWVGFSGGQH----HTVCMDSEGK 306 (413)
T ss_dssp --EEEEEETTCCEEEEECCTTSTTSC--------SSC--SCEEEEEECGGGCCTTCCEEEEEECSS----EEEEEETTSC
T ss_pred --EEEEEeCCCCEEEEeCCCCcCCCC--------CCC--CcccccEEchhccCCCceEEEEecccc----eEEEEeCCCC
Confidence 334445789999997654211100 000 000011111 1111134666655432 3444567899
Q ss_pred EEEEecCC------C---ce---EEEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 209 CKIFDLCT------G---ED---LLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 209 i~~wd~~~------~---~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
++.|=... + +. ...+.....|..++.- ....++-..+|.|+.|=...
T Consensus 307 v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 307 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACG--ASVGYAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred EEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEEC--cceEEEEeCCCCEEEecCCC
Confidence 99995422 1 11 1112222356666554 34555556789999997654
No 382
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=63.40 E-value=62 Score=26.62 Aligned_cols=250 Identities=14% Similarity=0.133 Sum_probs=116.9
Q ss_pred cceEEEEeCCceEEEEEcCCCeEEEEeCCCcccc------------eecccCCcceEEEEECCCCCEEEEecCCeEEEEE
Q psy10867 38 SPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKA------------QLRLICPGRISSMQASPDAAYIAVSIETKLHMWQ 105 (343)
Q Consensus 38 ~v~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~------------~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~ 105 (343)
.|..++...+ ..++...+++.|..|-....-.+ .........|..++.. ....++...+|.|+.|-
T Consensus 69 ~i~~va~G~~-ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G-~~h~~alt~~G~v~~wG 146 (406)
T 4d9s_A 69 QIVSVTCGAD-HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCLAVTMEGEVQSWG 146 (406)
T ss_dssp CEEEEEECSS-EEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC-SSEEEEEETTSCEEEEE
T ss_pred CEEEEEeCcc-eEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC-hhheEEEcCCCcEEEeC
Confidence 4556554333 33334444358888854332111 1111122357777654 34455567899999997
Q ss_pred ccCC-c----------eEEEeccc-CCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867 106 ISSG-R----------LLATASSH-YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173 (343)
Q Consensus 106 ~~~~-~----------~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (343)
.... + ....+... ...|..++.. ....+.-..+|.|..|-........ .... ....
T Consensus 147 ~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG--------~g~~--~~~~ 214 (406)
T 4d9s_A 147 RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLG--------LGDR--TDRL 214 (406)
T ss_dssp CCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTC--------SSSS--CCEE
T ss_pred CCCCccCCCCCCCCcccceEecccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCC--------CCCC--CCcC
Confidence 5432 1 11122221 2256666653 3445555678999999654321110 0000 0000
Q ss_pred ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-c----------eEEEee--cCCcEEEEEEcCCCCE
Q psy10867 174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-E----------DLLSLI--LDTRLTCVAFDGTEDN 240 (343)
Q Consensus 174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~----------~~~~~~--~~~~i~~~~~~~~~~~ 240 (343)
.+..........|..++... ...+....+|.|+.|-.... + ....+. ....|..++.- ...
T Consensus 215 ~p~~v~~~~~~~i~~va~G~----~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~h 288 (406)
T 4d9s_A 215 VPERVTSTGGEKMSMVACGW----RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRH 288 (406)
T ss_dssp EEEECCCSTTCCEEEEEECS----SEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSE
T ss_pred ccEEecccCCceEEEEEECC----CcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCE
Confidence 11111112224565665544 34455567889999854321 1 011111 12335555543 345
Q ss_pred EEEEcCCCcEEEEEeecccccccccccC-CCCCCccccccCcEEEEEEccCCCEEEEEeCCCcEEEEecc
Q psy10867 241 IYMGTSEGVIKSFCLRQVPRTRDHHIQD-STSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309 (343)
Q Consensus 241 l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 309 (343)
.++-..+|.|+.|=.........-.... ..+..........|..++.. ....++-..||.|+.|-..
T Consensus 289 s~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G--~~hs~alt~~G~v~~wG~n 356 (406)
T 4d9s_A 289 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCG--WRHTLAVTERNNVFAWGRG 356 (406)
T ss_dssp EEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEEC--SSEEEEEETTSCEEEEECC
T ss_pred EEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeC--CCeEEEEeCCCCEEEecCC
Confidence 5555678999999765433221100000 00000000112345555543 3345555688999999653
No 383
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=61.90 E-value=31 Score=29.82 Aligned_cols=69 Identities=13% Similarity=-0.010 Sum_probs=47.4
Q ss_pred cceEEEEeecCCCceEEEEeeCCCeEEEEecCCCc----eEEEee---cCCcEE-EEEEcCCCCEEEEEcCCCcEEE
Q psy10867 184 LPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE----DLLSLI---LDTRLT-CVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 184 ~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~---~~~~i~-~~~~~~~~~~l~~~~~d~~i~i 252 (343)
...++++....+....++.|+.+|.|.-..+.... .+..+. .+.+|. .+.++++..+|++++.++.+++
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35777777766655788899999988655554221 233333 245775 8999999999999987765544
No 384
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=61.69 E-value=82 Score=28.10 Aligned_cols=68 Identities=13% Similarity=0.209 Sum_probs=43.4
Q ss_pred ceEEEEee----cCCCceEEEEeeCCCeEE-EEecCCCc-------eEEEe---ecCCcEEEEEEcCCCCEEEEEcCCCc
Q psy10867 185 PVTHVTLS----KLGAKSRVASVSHDRTCK-IFDLCTGE-------DLLSL---ILDTRLTCVAFDGTEDNIYMGTSEGV 249 (343)
Q Consensus 185 ~v~~~~~~----~~~~~~~l~~~~~d~~i~-~wd~~~~~-------~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~ 249 (343)
..+.|+.+ ++++...++.|+.+|.|. +.-..... .+.++ ..+.+|..+.++++..+|++++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 34556553 334335788899999875 33222211 12222 24667999999999999999998876
Q ss_pred EEE
Q psy10867 250 IKS 252 (343)
Q Consensus 250 i~i 252 (343)
+++
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 385
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=60.46 E-value=54 Score=24.98 Aligned_cols=148 Identities=10% Similarity=0.006 Sum_probs=77.0
Q ss_pred EecCCeEEEEEccCCce-EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCcccccc
Q psy10867 95 VSIETKLHMWQISSGRL-LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173 (343)
Q Consensus 95 ~~~d~~i~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (343)
.+.+|.|+--....-.. ...++.. +.+..+........++..+..|.++-+....-.... ..+... .
T Consensus 8 lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r--------~~G~~i---~ 75 (256)
T 1zvt_A 8 LSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSAR--------GQGEPL---T 75 (256)
T ss_dssp EETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSS--------SCCEEG---G
T ss_pred EeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcC--------CCCeEe---e
Confidence 35666666554332110 0122222 344444444445566667777887666554321000 000000 0
Q ss_pred ceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-------ceEEEeecCCcEEEEEEc-CCCCEEEEEc
Q psy10867 174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------EDLLSLILDTRLTCVAFD-GTEDNIYMGT 245 (343)
Q Consensus 174 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------~~~~~~~~~~~i~~~~~~-~~~~~l~~~~ 245 (343)
.. ..+. ....|..+....++ .+++.++..|.++...+... .....+.....+..+... .++..++..+
T Consensus 76 ~~-i~L~-~~e~Iv~~~~~~~~--~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T 151 (256)
T 1zvt_A 76 GK-LTLP-PGATVDHMLMESDD--QKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAIT 151 (256)
T ss_dssp GT-CCCC-TTCCEEEEECCCTT--CEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEE
T ss_pred ee-ecCC-CCCEEEEEEEeCCC--CEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEc
Confidence 01 1122 23456555433333 56888899999998877432 222223333455555555 3566888899
Q ss_pred CCCcEEEEEeecc
Q psy10867 246 SEGVIKSFCLRQV 258 (343)
Q Consensus 246 ~d~~i~i~d~~~~ 258 (343)
.+|.+..++....
T Consensus 152 ~~G~~lrf~~~ei 164 (256)
T 1zvt_A 152 QAGRMLMFPVSDL 164 (256)
T ss_dssp TTSEEEEEEGGGS
T ss_pred CCCeEEEEEHHHC
Confidence 9999999988764
No 386
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=59.96 E-value=99 Score=27.87 Aligned_cols=226 Identities=8% Similarity=0.031 Sum_probs=114.8
Q ss_pred EEecCCC--CeEEEEecCCceEEEE-EecCCC------CcceEEEEeCCceEEEEEc----------CCCeEEEEeCCCc
Q psy10867 8 AFSYDGS--GAISVWEPKGGTLLMS-YKGASV------LSPHSMCLLGNDYVLGVEK----------GKPMIQAWPVNSQ 68 (343)
Q Consensus 8 ~~s~~~d--g~i~iwd~~~~~~~~~-~~~~~~------~~v~~~~~~~~~~~~~~~~----------~~~~i~iw~~~~~ 68 (343)
.+|.+|+ ..++++|+.+++.+.. |..... .....++|.+++.++.+.. ....++.|.+.+.
T Consensus 147 ~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~ 226 (711)
T 4hvt_A 147 SMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGES 226 (711)
T ss_dssp EEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSC
T ss_pred EeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCC
Confidence 3444442 5789999999987642 220000 0113447775555555421 1147888887765
Q ss_pred ccc--eecccCCcc-eEEEEECCCCCE-----EEE-e---cCCeEEEEEccC--CceEEEecccCCCeEEEEEecCCCEE
Q psy10867 69 EKA--QLRLICPGR-ISSMQASPDAAY-----IAV-S---IETKLHMWQISS--GRLLATASSHYQPITIVKWSADSNFI 134 (343)
Q Consensus 69 ~~~--~~~~~~~~~-v~~~~~s~~~~~-----l~~-~---~d~~i~v~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l 134 (343)
... .++...... -.....++++++ +++ + ....+.+.+... ++. ..+...... .+..+.++.++
T Consensus 227 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~~~~~~~~~~~ 303 (711)
T 4hvt_A 227 IEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSDA--TLQGSFKEYVF 303 (711)
T ss_dssp GGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTTC--EEEEEETTEEE
T ss_pred hHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCcc--eEeeeECCEEE
Confidence 332 233332223 234555667662 333 2 124677777653 332 333222221 23344566555
Q ss_pred EEec----------CCCeEEEeecCcccee----eeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEE
Q psy10867 135 VTGG----------EDGTICVWQLSRLICK----QTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV 200 (343)
Q Consensus 135 ~s~~----------~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 200 (343)
+... ..+.|...++...... .. .+.+ ........+..+.+..+ .++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------------~~~~-~~~~~~~~l~~~~~~~~---~l~ 363 (711)
T 4hvt_A 304 WLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS----------------LKIL-FTPTANEVFNFISTTKD---RVF 363 (711)
T ss_dssp EECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT----------------CEEE-ECCCTTEEEEEEEECSS---CEE
T ss_pred EEECcccccccccCCCCeEEEEECCccccccccccc----------------ceEE-ECCCCCCeEEEEEEECC---EEE
Confidence 5331 3567888887764210 00 0010 11223445777888775 477
Q ss_pred EEeeCCCe--EEEEecCCCc-eEEE-eec--CCcEEEEEEcCCCCEEEE-Ec---CCCcEEEEEee
Q psy10867 201 ASVSHDRT--CKIFDLCTGE-DLLS-LIL--DTRLTCVAFDGTEDNIYM-GT---SEGVIKSFCLR 256 (343)
Q Consensus 201 ~~~~~d~~--i~~wd~~~~~-~~~~-~~~--~~~i~~~~~~~~~~~l~~-~~---~d~~i~i~d~~ 256 (343)
++...++. +.++|+.+++ .... +.. ...+......+++..++. .+ .-+.+..+|+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 77777764 6677776664 2233 332 345666667777654443 32 23567777664
No 387
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=55.21 E-value=84 Score=25.56 Aligned_cols=209 Identities=15% Similarity=0.042 Sum_probs=110.6
Q ss_pred CCCCCEEEE-ecCCeEEEEEccC---------CceEEEecccCCCeEEEEEecCCCEEEEecCCCeEEEeecCccceeee
Q psy10867 87 SPDAAYIAV-SIETKLHMWQISS---------GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQT 156 (343)
Q Consensus 87 s~~~~~l~~-~~d~~i~v~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 156 (343)
-|+..+++. +.+|.|+--.+.+ |..-..++. ...+..+........++..+..|.+.-+....-....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~- 81 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG- 81 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC-
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC-
Confidence 356666664 8899988776532 222333433 4456666665566667777777877665543211000
Q ss_pred eecCCCCCCCCccccccceeeeecccccceEEEEeecC-CCceEEEEeeCCCeEEEEecCCCce-----E--EEeecCCc
Q psy10867 157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL-GAKSRVASVSHDRTCKIFDLCTGED-----L--LSLILDTR 228 (343)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~-----~--~~~~~~~~ 228 (343)
....+. ....+..+. ....|.++...++ .+..+++.++..|.++...+..... + ..+.....
T Consensus 82 -------r~a~G~--~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~ 151 (370)
T 3l6v_A 82 -------SNARGR--PIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDA 151 (370)
T ss_dssp -------TTSCCE--EGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCC
T ss_pred -------cccCCc--CHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCE
Confidence 000000 000001122 2344555443321 1125899999999999887643221 1 12223445
Q ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcEEEEEEcc-------------------
Q psy10867 229 LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI------------------- 289 (343)
Q Consensus 229 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------------------- 289 (343)
+..+........++..+.+|.+..++.......... ..+.....+.. ...|.++...+
T Consensus 152 lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~--a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (370)
T 3l6v_A 152 LVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRT--ATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVE 228 (370)
T ss_dssp EEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTT--CCCEECCCCCT-TCCEEEEEEECCC-----------------
T ss_pred EEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCC--CCCeeeEEeCC-CCEEEEEEEecccccccccccccccccccc
Confidence 555555556678888889999988887653322110 01111122222 23454444333
Q ss_pred ----------------CCCEEEEEeCCCcEEEEeccc
Q psy10867 290 ----------------TGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 290 ----------------~~~~l~s~~~dg~i~iwd~~~ 310 (343)
++..+++.+..|..+...+..
T Consensus 229 t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 229 TTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ------------------CEEEEEETTSEEEEEEGGG
T ss_pred ccccccccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence 446788999999999887653
No 388
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=53.04 E-value=81 Score=24.76 Aligned_cols=234 Identities=9% Similarity=0.044 Sum_probs=119.0
Q ss_pred ceEEEecCCCCeEEEEecCCceEEE---------EEecCCCCcceEEEEeCCceEEEEEcCCCeEEEEe---CCCc----
Q psy10867 5 NEVAFSYDGSGAISVWEPKGGTLLM---------SYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP---VNSQ---- 68 (343)
Q Consensus 5 ~~~~~s~~~dg~i~iwd~~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~iw~---~~~~---- 68 (343)
..+.+.-+.+|.|+--.+.+.+..+ .++.+.. -+..+..+....+++.... |.+.-+. +...
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~-l~~~~~~~~~~~ll~fT~~-G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDF-IDRLLVANTHDHILCFSSR-GRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CEEEEEEETTSEEEEEECC--------------------CC-EEEEEEEETTCEEEEEETT-SEEEEEEGGGSCCCCSSS
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCE-EEEEEEECCCCEEEEEECC-CEEEEEEhhHCcCCCCCC
Confidence 3456777788888776664422211 1233332 3333344455566666665 7655443 3322
Q ss_pred --ccce-ec-ccCCcceEEEEE-C--CCCC-EEEEecCCeEEEEEccCCc-------eEEEecccCCCeEEEEEecCCCE
Q psy10867 69 --EKAQ-LR-LICPGRISSMQA-S--PDAA-YIAVSIETKLHMWQISSGR-------LLATASSHYQPITIVKWSADSNF 133 (343)
Q Consensus 69 --~~~~-~~-~~~~~~v~~~~~-s--~~~~-~l~~~~d~~i~v~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~ 133 (343)
..+. .+ ......|..+.. . +++. ++..+..|.++.-.+..-. ....+..+ +.+..+....+...
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 1111 11 123345655533 1 2344 5556899999988775221 11123333 55656555555566
Q ss_pred EEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEe
Q psy10867 134 IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213 (343)
Q Consensus 134 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd 213 (343)
++..+.+|.+..+....-..... ...+ .....+. ....|.++...+++ ..+++.+..|..+-.+
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr--------~a~G-----v~~i~L~-~~d~Vv~~~~~~~~--~~ll~~T~~G~~Kr~~ 223 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGC--------NTTG-----VRGIRLG-EGDKVVSLIVPRGD--GAILTATQNGYGKRTA 223 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCT--------TCCC-----EECCCCC-TTCCEEEEECCCSS--CEEEEEETTSEEEEEC
T ss_pred EEEECCCCcEEEEEHHHcCccCC--------CCCC-----eEeEEeC-CCCEEEEEEEecCC--CEEEEEEcCCceEEEE
Confidence 77788889888887654321100 0000 0111122 23456666554444 5688889999998887
Q ss_pred cCCCc-------eEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeec
Q psy10867 214 LCTGE-------DLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 214 ~~~~~-------~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 257 (343)
+..-. -+..+. ....+..+....+...++..+.+|.+..++...
T Consensus 224 ~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 224 VAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp GGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred HHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 64221 122222 124455544444456677777888877777665
No 389
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=48.77 E-value=1.1e+02 Score=25.14 Aligned_cols=221 Identities=12% Similarity=0.097 Sum_probs=102.9
Q ss_pred cceEEEEECCCCCEEEEecCCeEEEEEc--cC-Cce---------EEEecccCCCeEEEEEecCCCEEEEecCCCeEEEe
Q psy10867 79 GRISSMQASPDAAYIAVSIETKLHMWQI--SS-GRL---------LATASSHYQPITIVKWSADSNFIVTGGEDGTICVW 146 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~~d~~i~v~~~--~~-~~~---------~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 146 (343)
..|..++.. ....++...+|.|+.|-. .. +++ ..........|..++.. ....+.-..+|.|..|
T Consensus 127 ~~i~~va~G-~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~w 203 (423)
T 3mvd_K 127 GKALCISAG-DSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTV 203 (423)
T ss_dssp SCEEEEEEC-SSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred CCEEEEEcC-cCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEe
Confidence 456666654 334555578999999985 22 211 11111123356666653 3345555678999999
Q ss_pred ecCccceeeeeecCC-CCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC--------
Q psy10867 147 QLSRLICKQTVAFGI-PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-------- 217 (343)
Q Consensus 147 d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-------- 217 (343)
-....-......... .............+..........|..++.... ..++.-..++.++.|-....
T Consensus 204 G~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~---~~~~~~~~~g~v~~wG~n~~gqlg~~~~ 280 (423)
T 3mvd_K 204 GCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNY---CTFMRESQTQVIWATGLNNFKQLAHETK 280 (423)
T ss_dssp ECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETT---EEEEEETTTCCEEEEEECTTCTTSSCCT
T ss_pred eCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCc---EEEEEECCCCeEEEEeCCCCCcCCCCCC
Confidence 755432111100000 000000001111222222233345666665543 34444467889999854321
Q ss_pred --c-eEEEee-cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccCC-CCCCccccccCcEEEEEEccCCC
Q psy10867 218 --E-DLLSLI-LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS-TSNPDFIGHEKQVTSLSCSITGI 292 (343)
Q Consensus 218 --~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~ 292 (343)
. ...... ....|..++.- ..+.++-..+|.|+.|=.........-..... .....+..-...|..++....
T Consensus 281 ~~~~~~~p~~~~~~~v~~ia~G--~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~-- 356 (423)
T 3mvd_K 281 GKEFALTPIKTELKDIRHIAGG--QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEV-- 356 (423)
T ss_dssp TCSEEEEEEEECCCSEEEEEEC--SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETT--
T ss_pred CCceeeeeEEcCCCCeEEEEcc--cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCC--
Confidence 0 111111 13345555543 34555556789999997654322211000000 000001111225666665433
Q ss_pred EEEEEeCCCcEEEEecc
Q psy10867 293 TLLSSSADETLKIWHTI 309 (343)
Q Consensus 293 ~l~s~~~dg~i~iwd~~ 309 (343)
..+.-..||.|+.|-..
T Consensus 357 hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 357 CSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp EEEEEETTSCEEEEECC
T ss_pred eEEEEcCCCCEEEECCC
Confidence 44444688999999654
No 390
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=45.81 E-value=1.8e+02 Score=26.61 Aligned_cols=155 Identities=14% Similarity=0.088 Sum_probs=73.4
Q ss_pred CCCeEEEEEecC-CCEEEEecCCCeEEEeecCccceeeeeecCCCCCCCCccccccceeeeecc----cccceEEEEeec
Q psy10867 119 YQPITIVKWSAD-SNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQ----HSLPVTHVTLSK 193 (343)
Q Consensus 119 ~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~ 193 (343)
.+.|.+|+++|. ...++.++..+.|...+=. ++.-. ++..... ....+.++++.|
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~Dg-G~tW~-------------------~~~~~~~~~~~~~~~i~~ia~dp 73 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAG-TSKWI-------------------PLNDFIEAQDMNIMGTESIALDP 73 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETT-TTEEE-------------------ESCTTCCGGGGGGCSEEEEEEET
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCC-CCCee-------------------ECccCCCcccccCCceeEEEECC
Confidence 458999999984 4566777766766544322 21111 1110000 234689999998
Q ss_pred CCCceEEEEeeCCCe----EEEEec-CCCceEEEeecC----------CcEEEEEEcCC-CCEEEEEcCCCcEEEEEeec
Q psy10867 194 LGAKSRVASVSHDRT----CKIFDL-CTGEDLLSLILD----------TRLTCVAFDGT-EDNIYMGTSEGVIKSFCLRQ 257 (343)
Q Consensus 194 ~~~~~~l~~~~~d~~----i~~wd~-~~~~~~~~~~~~----------~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~ 257 (343)
..+ ..++.+..+.. -.||.. ..|+.-...... ..+..++++|. .+.++++...+. +|....
T Consensus 74 ~~~-~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~D 150 (789)
T 1sqj_A 74 NNP-DRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSD 150 (789)
T ss_dssp TEE-EEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESS
T ss_pred CCC-CEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECC
Confidence 543 33433332211 233332 334332222211 12456888875 356666664443 343333
Q ss_pred ccccccccccCCCCCCccccccCcEEEEEEccC-CCEEEEEeCC
Q psy10867 258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT-GITLLSSSAD 300 (343)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~d 300 (343)
......... . ..........+..+.++|. +..++.+..+
T Consensus 151 gG~TW~~~~--~--~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 151 RAKTWTNVT--S--IPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTSSCEEET--T--SCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred CCcccCCCc--c--CccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 222211100 0 0000011245788899884 4456666554
No 391
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=44.67 E-value=60 Score=20.84 Aligned_cols=26 Identities=4% Similarity=-0.033 Sum_probs=16.1
Q ss_pred EEEEECCCCCEEEEecCCeEEEEEccC
Q psy10867 82 SSMQASPDAAYIAVSIETKLHMWQISS 108 (343)
Q Consensus 82 ~~~~~s~~~~~l~~~~d~~i~v~~~~~ 108 (343)
..+.+..+|.+++...++.+ +|.-.+
T Consensus 59 ~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 35667778887776545543 676443
No 392
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=43.68 E-value=1.2e+02 Score=26.18 Aligned_cols=68 Identities=15% Similarity=0.142 Sum_probs=45.7
Q ss_pred ceEEEEeecCCCceEEEEeeCCCeEEEEecC-CC--ceEEEee--cCCcE-EEEEEcCCCCEEEEEcCCCcEEE
Q psy10867 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-TG--EDLLSLI--LDTRL-TCVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~--~~~~~~~--~~~~i-~~~~~~~~~~~l~~~~~d~~i~i 252 (343)
..+.|++........+..|+.+|.|.-.-+. .+ ..+..+. ...+| ..+.++++..+|++++..+.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 4677777654444678889999998644332 22 2223332 35567 48999999999999988876665
No 393
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=37.64 E-value=55 Score=28.31 Aligned_cols=72 Identities=19% Similarity=0.245 Sum_probs=42.7
Q ss_pred cEEEEEEcCCC--CEEEEEcCCCcEEEEEeeccccc-ccccccCCCCCCccccccCcEE-EEEEccCCCEEEEEeCCCcE
Q psy10867 228 RLTCVAFDGTE--DNIYMGTSEGVIKSFCLRQVPRT-RDHHIQDSTSNPDFIGHEKQVT-SLSCSITGITLLSSSADETL 303 (343)
Q Consensus 228 ~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i 303 (343)
..++++....+ ..++.|+.+|.|.-..+...... ..+. .+ .+.....+|. .|.+++++.+|..++.++.+
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e-----~~-~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~ 474 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYE-----MV-SVFKDGSPILRDMAFSINQLYLYVMSERQVT 474 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEE-----EE-ECCTTCCCCCSCCEECTTSSEEEEECSSEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEE-----EE-EeecCCCccccceEEccCCCeEEEEeccccc
Confidence 35556655433 45778999998876655432111 0000 01 1111245674 88999999999999887655
Q ss_pred EE
Q psy10867 304 KI 305 (343)
Q Consensus 304 ~i 305 (343)
+|
T Consensus 475 kv 476 (539)
T 3al9_A 475 RV 476 (539)
T ss_dssp EE
T ss_pred ee
Confidence 55
No 394
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=37.56 E-value=1.7e+02 Score=23.97 Aligned_cols=207 Identities=12% Similarity=0.110 Sum_probs=96.8
Q ss_pred cceEEEEECCCCCEEEEecC-CeEEEEEccCC-c----------eEEEecc-cCCCeEEEEEecCCCEEEEecCCCeEEE
Q psy10867 79 GRISSMQASPDAAYIAVSIE-TKLHMWQISSG-R----------LLATASS-HYQPITIVKWSADSNFIVTGGEDGTICV 145 (343)
Q Consensus 79 ~~v~~~~~s~~~~~l~~~~d-~~i~v~~~~~~-~----------~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~i 145 (343)
..|..++...+ ..++...+ +.|+.|-.... + ....+.. ....|..++.. ....+.-..+|.|..
T Consensus 68 ~~i~~va~G~~-ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~ 144 (406)
T 4d9s_A 68 HQIVSVTCGAD-HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQS 144 (406)
T ss_dssp SCEEEEEECSS-EEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEE
T ss_pred CCEEEEEeCcc-eEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEEE
Confidence 35777766533 33444444 59999964321 0 0111111 22356666653 344555577899999
Q ss_pred eecCccceeeeeecCCCCCCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecCCC-c------
Q psy10867 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG-E------ 218 (343)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~------ 218 (343)
|-....-.... ... .....+..........|..++... ...+....+|.++.|-.... +
T Consensus 145 wG~n~~GqLG~--------g~~--~~~~~p~~v~~~~~~~i~~va~G~----~hs~alt~~G~v~~wG~n~~GqlG~g~~ 210 (406)
T 4d9s_A 145 WGRNQNGQLGL--------GDT--EDSLVPQKIQAFEGIRIKMVAAGA----EHTAAVTEDGDLYGWGWGRYGNLGLGDR 210 (406)
T ss_dssp EECCTTSTTCS--------SSC--CCEEEEEECGGGTTCCEEEEEECS----SEEEEEETTSCEEEEECCTTSTTCSSSS
T ss_pred eCCCCCccCCC--------CCC--CCcccceEecccCCCcEEEEecCC----CeEEEEeCCCCEEEeeCCCCCCCCCCCC
Confidence 97554211100 000 000011111111223566665544 34555568899999953321 1
Q ss_pred --e--EEEee--cCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeecccccccccccC---CCCCCccccccCcEEEEEEcc
Q psy10867 219 --D--LLSLI--LDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD---STSNPDFIGHEKQVTSLSCSI 289 (343)
Q Consensus 219 --~--~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~ 289 (343)
. ...+. ....+..++.- ....++-..+|.|+.|-.........-.... ...+..+ ....|..++..
T Consensus 211 ~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~--~~~~v~~i~~G- 285 (406)
T 4d9s_A 211 TDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEAL--SNSFISQISGG- 285 (406)
T ss_dssp CCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGG--TTSCEEEEEEC-
T ss_pred CCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEeccc--CCCCEEEEEec-
Confidence 0 11111 12345555543 3455555678999999765433221100000 0001111 12235555443
Q ss_pred CCCEEEEEeCCCcEEEEec
Q psy10867 290 TGITLLSSSADETLKIWHT 308 (343)
Q Consensus 290 ~~~~l~s~~~dg~i~iwd~ 308 (343)
..+.+.-..||.|+.|-.
T Consensus 286 -~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 286 -WRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp -SSEEEEEETTSCEEEEEC
T ss_pred -CCEEEEEcCCCeEEEeeC
Confidence 334555567888888864
No 395
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=36.36 E-value=2.2e+02 Score=24.88 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=37.2
Q ss_pred ccccceEEEEeecCCCceEEEEeeCCC----eEEEEecCCCceEEEeec---CCcEEEEEEcCC
Q psy10867 181 QHSLPVTHVTLSKLGAKSRVASVSHDR----TCKIFDLCTGEDLLSLIL---DTRLTCVAFDGT 237 (343)
Q Consensus 181 ~~~~~v~~~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~---~~~i~~~~~~~~ 237 (343)
+|...+....|.|+.++..++.+.+++ -..+.|.++++.+..... .+......|.|+
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCC
Confidence 688888888888886445566655541 345688999999887753 233444445555
No 396
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=36.23 E-value=81 Score=19.90 Aligned_cols=79 Identities=15% Similarity=0.225 Sum_probs=38.4
Q ss_pred eEEEEeCCceEEEEEcCCCeEEEEeCCCcccceecccCCcceEEEEECCCCCEEEEecCCeEEEEEccCCceEEEecccC
Q psy10867 40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHY 119 (343)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~i~iw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~d~~i~v~~~~~~~~~~~~~~~~ 119 (343)
..+.+..|+.++.... .-.+|...+.... . ....+.+..||.+++...++. .+|...+.. .
T Consensus 21 y~l~~q~DgNLvly~~---~~~vW~ant~~~~-----~--~~~~L~l~~dGnLvL~d~~~~-~vWss~t~~--------~ 81 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH---STSTWASNTEIGG-----K--SGCSAVLQSDGNFVVYDSSGR-SLWASHSTR--------G 81 (105)
T ss_dssp EEEEECTTSCEEEEET---TEEEEECCCCCTT-----C--CSCEEEECTTSCEEEECTTCC-EEEECCCCC--------C
T ss_pred EEEEECCCCeEEEEEC---CEEEEEecCCCCC-----C--ccEEEEEeCCccEEEECCCcE-EEEEecCCC--------C
Confidence 3455555665555432 1335655433211 1 112467778888777654444 367643311 1
Q ss_pred CCeEEEEEecCCCEEEEe
Q psy10867 120 QPITIVKWSADSNFIVTG 137 (343)
Q Consensus 120 ~~v~~~~~~~~~~~l~s~ 137 (343)
.....+...++|++++.+
T Consensus 82 ~~~~~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 82 SGNYILILQDDGNVIIYG 99 (105)
T ss_dssp SSCEEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEC
Confidence 112334555667666653
No 397
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=34.44 E-value=1.5e+02 Score=22.48 Aligned_cols=108 Identities=9% Similarity=0.074 Sum_probs=62.5
Q ss_pred eEEEEeeCCCeEEEE---ecCCCceE-------EEeecCCcEEEEEEcCCCCEEEEEcCCCcEEEEEeeccccccccccc
Q psy10867 198 SRVASVSHDRTCKIF---DLCTGEDL-------LSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ 267 (343)
Q Consensus 198 ~~l~~~~~d~~i~~w---d~~~~~~~-------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 267 (343)
..++..+..|.++-+ ++..++.. ..+.....|..+....++.+|+.++..|.++...+.........
T Consensus 45 ~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~--- 121 (256)
T 1zvt_A 45 QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRA--- 121 (256)
T ss_dssp SCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTT---
T ss_pred CEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcC---
Confidence 356666777876655 44222211 11233556777754456778889999999999988765332211
Q ss_pred CCCCCCccccccCcEEEEEEc-cCCCEEEEEeCCCcEEEEeccc
Q psy10867 268 DSTSNPDFIGHEKQVTSLSCS-ITGITLLSSSADETLKIWHTIS 310 (343)
Q Consensus 268 ~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~ 310 (343)
+.....+.. .+.+..+... .++..++..+.+|.+..++...
T Consensus 122 -G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 122 -GKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp -CEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred -ceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 111222332 2344444444 3455788888999988887653
No 398
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=33.35 E-value=89 Score=26.65 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=42.0
Q ss_pred cEEEEEEcCC----C--CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccc--cccCcEEEEEEccCCCEEEEEeC
Q psy10867 228 RLTCVAFDGT----E--DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFI--GHEKQVTSLSCSITGITLLSSSA 299 (343)
Q Consensus 228 ~i~~~~~~~~----~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~ 299 (343)
..++++...- + ..++.|+.+|.|.-.-+.......... ...+..+. ....+|..|.++++..+|..++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~---~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~ 481 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLE---EVLLEEMTVFREPTTISAMELSTKQQQLYIGST 481 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC--------------CCEEECCSSSCCCCCEEEEETTTTEEEEEBS
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccc---eEEEEEEeecCCCCccceEEEcCCCCEEEEEEC
Confidence 3566665432 3 357779999987554332211100000 00011111 13468899999999999999998
Q ss_pred CCcEEE
Q psy10867 300 DETLKI 305 (343)
Q Consensus 300 dg~i~i 305 (343)
++.++|
T Consensus 482 ~~V~~v 487 (495)
T 1q47_A 482 AGVAQL 487 (495)
T ss_dssp SCEEEE
T ss_pred CeEEEE
Confidence 876665
No 399
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=33.31 E-value=2.2e+02 Score=24.99 Aligned_cols=55 Identities=7% Similarity=0.110 Sum_probs=37.3
Q ss_pred eEEEEeeCCCeEEEEec-CCC----c-eEEEee---cCCcEEEEEEcCCCCEEEEEcCCCcEEE
Q psy10867 198 SRVASVSHDRTCKIFDL-CTG----E-DLLSLI---LDTRLTCVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 198 ~~l~~~~~d~~i~~wd~-~~~----~-~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i 252 (343)
..+..|+.+|.|.-.-. ..+ . .+..+. ...+|..+.++++...|++++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 57778889998764322 222 1 122232 3567999999999999999988776655
No 400
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=32.52 E-value=2.5e+02 Score=24.46 Aligned_cols=68 Identities=19% Similarity=0.206 Sum_probs=44.6
Q ss_pred ceEEEEeec----CCCceEEEEeeCCCeEE-EEecCC--C----c-eEEEee------------cCCcEEEEEEcCCCCE
Q psy10867 185 PVTHVTLSK----LGAKSRVASVSHDRTCK-IFDLCT--G----E-DLLSLI------------LDTRLTCVAFDGTEDN 240 (343)
Q Consensus 185 ~v~~~~~~~----~~~~~~l~~~~~d~~i~-~wd~~~--~----~-~~~~~~------------~~~~i~~~~~~~~~~~ 240 (343)
..+.|++.. ++....++.|+.+|.|. +..... + . .+.++. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 457777764 23346788899999975 433221 1 1 122222 1457889999999999
Q ss_pred EEEEcCCCcEEE
Q psy10867 241 IYMGTSEGVIKS 252 (343)
Q Consensus 241 l~~~~~d~~i~i 252 (343)
|++++.++.+++
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999998887665
No 401
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=31.37 E-value=1.3e+02 Score=27.04 Aligned_cols=68 Identities=13% Similarity=0.008 Sum_probs=44.7
Q ss_pred ceEEEEeecCCCceEEEEeeCCCeEEEEecCC-C---ceEEEee---cCCcE-EEEEEcCCCCEEEEEcCCCcEEE
Q psy10867 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT-G---EDLLSLI---LDTRL-TCVAFDGTEDNIYMGTSEGVIKS 252 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~---~~~~~~~---~~~~i-~~~~~~~~~~~l~~~~~d~~i~i 252 (343)
..+.++....+....++.|+.+|.|.-.-+.. . ..+..+. ...+| ..+.++++..+|++++..+.+++
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 35556665545447788899999987544332 1 1223332 34566 68999999999999988776665
No 402
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=31.33 E-value=2.4e+02 Score=23.86 Aligned_cols=68 Identities=12% Similarity=-0.045 Sum_probs=41.8
Q ss_pred ceEEEEeecCCCceEEEEeeCCCeEEEE-ecCCCc-----eEEEeecCCcEE-EEEEcC-CCCEEEEEcCCCcEEE
Q psy10867 185 PVTHVTLSKLGAKSRVASVSHDRTCKIF-DLCTGE-----DLLSLILDTRLT-CVAFDG-TEDNIYMGTSEGVIKS 252 (343)
Q Consensus 185 ~v~~~~~~~~~~~~~l~~~~~d~~i~~w-d~~~~~-----~~~~~~~~~~i~-~~~~~~-~~~~l~~~~~d~~i~i 252 (343)
.+++++....++...++.|+.+|.|.-- -..... ....+..+.+|. .+.++| ++..|++++..+.+++
T Consensus 341 ~LTsVav~vv~~~TVlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei~ee~~V~~~L~ldp~~~~~LyV~s~~~V~qV 416 (476)
T 3nvn_B 341 DLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPDPVKNIYIYLTAGKEVRRI 416 (476)
T ss_dssp SEEEEEEEESSSSEEEEEEETTSEEEEEECCTTSCCCCCEEEEECTTCCCBCSCCEECSSCTTEEEEEETTEEEEE
T ss_pred CCceEEEEEeCCeEEEEEECCCceEEEEEecCCCCccceeEEEeecCCCccccccccCccccceEEEecCcEEEEE
Confidence 4677776655544788889999987633 222221 112222345555 677887 5778888887765554
No 403
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=29.98 E-value=2.8e+02 Score=24.23 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=28.4
Q ss_pred cccCcEEEEEEccCC--CEEEEEeCCC----cEEEEecccceeeeecc
Q psy10867 277 GHEKQVTSLSCSITG--ITLLSSSADE----TLKIWHTISRQCLRTIQ 318 (343)
Q Consensus 277 ~~~~~v~~~~~s~~~--~~l~s~~~dg----~i~iwd~~~~~~~~~~~ 318 (343)
+|...+.--.|.|+. ..++.+.+++ -..+.|..+|+.+....
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 677777777788874 3566655542 34567888888887664
No 404
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=28.20 E-value=78 Score=28.22 Aligned_cols=28 Identities=11% Similarity=0.162 Sum_probs=23.5
Q ss_pred ccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867 278 HEKQVTSLSCSITGITLLSSSADETLKI 305 (343)
Q Consensus 278 ~~~~v~~~~~s~~~~~l~s~~~dg~i~i 305 (343)
...+|..|.++++.+.|..++.++.++|
T Consensus 468 ~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 468 EPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4567889999999999999998876665
No 405
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.14 E-value=3.3e+02 Score=24.32 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=43.9
Q ss_pred ceEEEEeec----CCC-ceEEEEeeCCCeEEEE-ecCCCce-EEEe---ecCCcEEEEEEcCCC--CEEEEEcCCCcEEE
Q psy10867 185 PVTHVTLSK----LGA-KSRVASVSHDRTCKIF-DLCTGED-LLSL---ILDTRLTCVAFDGTE--DNIYMGTSEGVIKS 252 (343)
Q Consensus 185 ~v~~~~~~~----~~~-~~~l~~~~~d~~i~~w-d~~~~~~-~~~~---~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i 252 (343)
..+.|++.. ++. ...++.|+.+|.|.-. ....... +..+ ....+|..+.++++. .+|++++.++.+++
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 356776642 221 2578889999987433 3333222 2222 235688899999988 99999988876665
No 406
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=23.07 E-value=1.4e+02 Score=25.71 Aligned_cols=70 Identities=20% Similarity=0.206 Sum_probs=40.6
Q ss_pred EEEEEEcCCC--CEEEEEcCCCcEEEEEeecccccccccccCCCCCCccccccCcE-EEEEEccCCCEEEEEeCCCcEEE
Q psy10867 229 LTCVAFDGTE--DNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV-TSLSCSITGITLLSSSADETLKI 305 (343)
Q Consensus 229 i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~i~i 305 (343)
.++++..... ..++.|+.+|.|.-.-+........+. ...+ ....+| ..|.++++...|..++.++.+++
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~e------e~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYS------TQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSE------EEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEe------eecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 5555554322 356678999988755443211111000 0011 234567 47899999999999988877665
No 407
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=20.94 E-value=4.8e+02 Score=23.81 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=35.7
Q ss_pred CcceEEEEECCC--CCEEEEecCCeEEEEEccCCceEEEeccc-------CCCeEEEEEecC-CCEEEEe
Q psy10867 78 PGRISSMQASPD--AAYIAVSIETKLHMWQISSGRLLATASSH-------YQPITIVKWSAD-SNFIVTG 137 (343)
Q Consensus 78 ~~~v~~~~~s~~--~~~l~~~~d~~i~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~-~~~l~s~ 137 (343)
.+.|.+|+++|. +.+++.+..+.|...+ +.|+.-..+..+ ...+.+|++.|. .+.++.+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 468999999985 4455556666665554 344433333321 246999999983 3444444
No 408
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=20.48 E-value=4.8e+02 Score=23.57 Aligned_cols=197 Identities=12% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCCCEEEE-ecCCeEEEEEccCCceEEEecccCCCeEEEEEecCCCEEEEecCCCe---EEEeecCccceeeeeecCCCC
Q psy10867 88 PDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGT---ICVWQLSRLICKQTVAFGIPG 163 (343)
Q Consensus 88 ~~~~~l~~-~~d~~i~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~~~~~ 163 (343)
|+....++ +.+|-|+--.-..-.....-....+.+..+.-......++.-+..|. +++|++.........-
T Consensus 470 ~~e~v~v~ls~~GyiKr~~g~~~~~~~~~~k~~D~~~~~~~~~t~d~ll~ft~~Gr~y~~~~~~lP~~~~~G~~i----- 544 (716)
T 1zvu_A 470 PSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPL----- 544 (716)
T ss_dssp CCCCCCEEEETTTEEEECCC---------------CCEEECCCSSSCEEEEETTSEEEEECTTTSCCCC---CBS-----
T ss_pred CCceEEEEEecCCeEeccCCCCcCccccccCCCCeEEEEEEecCCCEEEEEecCCcEEEEEeeecccccccCeeH-----
Q ss_pred CCCCccccccceeeeecccccceEEEEeecCCCceEEEEeeCCCeEEEEecC-------CCceEEEeecCCcEEEEEEc-
Q psy10867 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC-------TGEDLLSLILDTRLTCVAFD- 235 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~~wd~~-------~~~~~~~~~~~~~i~~~~~~- 235 (343)
.-..--.....|..+...++. .+++.++..|.++.-.+. .|.....+.....+..+...
T Consensus 545 -----------~~ll~l~~~e~i~~~~~~~~~--~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~~d~lv~~~~~~ 611 (716)
T 1zvu_A 545 -----------TGKLTLPPGATVDHMLMESDD--QKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIE 611 (716)
T ss_dssp -----------TTTSCCCTTCCEEEEECCCTT--CEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECC
T ss_pred -----------HhccCCCCCCeEEEEEEecCC--ceEEEEeCCceEEEecHHHhcccCccceEEEeeCCCCEEEEEEEec
Q ss_pred CCCCEEEEEcCCCcEEEEEeecccccccccccCCCCCCcccc-----ccCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy10867 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIG-----HEKQVTSLSCSITGITLLSSSADETLKI 305 (343)
Q Consensus 236 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~dg~i~i 305 (343)
..+..++..+.+|....|+......... ..+.....+.. ....|.++..-.++..++..+..+..++
T Consensus 612 ~~~~~v~l~t~~g~~lrf~~~~v~~~gr---~~GV~~i~l~~~~~k~~~d~v~~~~~~~~~~~l~~~~gk~~~~~ 683 (716)
T 1zvu_A 612 DASDMLLAITQAGRMLMFPVSDLPQLSK---GKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKL 683 (716)
T ss_dssp CTTCEEEEEETTSEEEEEESTTSCBCSS---BSCEESSCCCHHHHHTTSSCEEEEEEECSSCCEEEEETTEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEHHHCCccCc---ccCeEEEEecccccCCCCCEEEEEEEecCCCeEEEEECCccccc
Done!