RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10867
(343 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 80.2 bits (196), Expect = 1e-17
Identities = 63/310 (20%), Positives = 114/310 (36%), Gaps = 26/310 (8%)
Query: 7 VAFSYDGS--------GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKP 58
V F S I VW+ + G + KG + S + + +L
Sbjct: 23 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLASCSADM 81
Query: 59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASS 117
I+ W E + +SS+ P+ +I S + + MW++ +G + T +
Sbjct: 82 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 141
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
H + + +V+ + D I + D T+ VW ++ CK + P
Sbjct: 142 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE----LREHRHVVECISWAPES 197
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLI-LDTRLTCVAFDG 236
S S T + S S D+T K++D+ TG L++L+ D + V F
Sbjct: 198 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 257
Query: 237 TEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLS 296
I + ++ + ++ HE VTSL T +++
Sbjct: 258 GGKFILSCADDKTLRVW-----------DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 297 SSADETLKIW 306
S D+T+K+W
Sbjct: 307 GSVDQTVKVW 316
Score = 62.1 bits (149), Expect = 2e-11
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 24/137 (17%)
Query: 77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
G + P ++ S + + MW +S+G L T H + V + + FI++
Sbjct: 205 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 264
Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
+D T+ VW + + H VT + K
Sbjct: 265 CADDKTLRVWDYKNK----------------------RCMKTLNAHEHFVTSLDFHKTA- 301
Query: 197 KSRVASVSHDRTCKIFD 213
V + S D+T K+++
Sbjct: 302 -PYVVTGSVDQTVKVWE 317
Score = 59.8 bits (143), Expect = 9e-11
Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 60 IQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSH 118
I+ W V++ + + + +I + + L +W + R + T ++H
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 288
Query: 119 YQPITIVKWSADSNFIVTGGEDGTICVWQ 147
+T + + + ++VTG D T+ VW+
Sbjct: 289 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 59.4 bits (142), Expect = 1e-10
Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 29/241 (12%)
Query: 114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV---------------- 157
S H P+T V + + +V+ ED TI VW ++T+
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 158 --AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLC 215
+ +++ H ++S + + S S D+T K++++
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 216 TGEDLLSLILDTR-LTCVAFDGTEDNIYMGTSEGVIKSFC---------LRQVPRTRDHH 265
TG + + + V + I +++ ++ + LR+ +
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191
Query: 266 IQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
S+ I + G LLS S D+T+K+W + CL T+ H V
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 251
Query: 325 G 325
G
Sbjct: 252 G 252
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 68.6 bits (166), Expect = 1e-13
Identities = 18/141 (12%), Positives = 46/141 (32%), Gaps = 4/141 (2%)
Query: 9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLL--GNDYVLGVEKGKPMIQAWPVN 66
S + +W+ + G ++ G +++C GN + G + + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 67 SQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIV 125
+ I+S+ S + + ++W + H ++ +
Sbjct: 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 318
Query: 126 KWSADSNFIVTGGEDGTICVW 146
+ D + TG D + +W
Sbjct: 319 GVTDDGMAVATGSWDSFLKIW 339
Score = 67.8 bits (164), Expect = 2e-13
Identities = 38/271 (14%), Positives = 78/271 (28%), Gaps = 33/271 (12%)
Query: 79 GRISSMQASPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTG 137
+I +M D+ + S + KL +W + + + ++ N++ G
Sbjct: 56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACG 115
Query: 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK---- 193
G D ++ L V+ + G +G + S T
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ 175
Query: 194 -----------------LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR-LTCVAFD 235
S + D + K++D+ G + + + F
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235
Query: 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295
+ G+ + + F LR + + +TS+S S +G LL
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDN---------IICGITSVSFSKSGRLLL 286
Query: 296 SSSADETLKIWHTISRQCLRTIQ-HKGPVLG 325
+ D +W + + H V
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Score = 60.9 bits (146), Expect = 5e-11
Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 23/152 (15%)
Query: 101 LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
+W + G T + H I + + + N TG +D T ++ L T
Sbjct: 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMT---- 263
Query: 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220
+ +T V+ SK G + + D C ++D +
Sbjct: 264 ----------------YSHDNIICGITSVSFSKSG--RLLLAGYDDFNCNVWDALKADRA 305
Query: 221 LSLIL-DTRLTCVAFDGTEDNIYMGTSEGVIK 251
L D R++C+ + G+ + +K
Sbjct: 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337
Score = 59.0 bits (141), Expect = 2e-10
Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 38/209 (18%)
Query: 102 HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161
+W I +G+ T + H + + + D+ V+G D + +W + +C+QT
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF---- 222
Query: 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKI---FDLCTGE 218
+ H + + G + A+ S D TC++
Sbjct: 223 ------------------TGHESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELM 262
Query: 219 DLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278
+ +T V+F + + G + + + R GH
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-----------LAGH 311
Query: 279 EKQVTSLSCSITGITLLSSSADETLKIWH 307
+ +V+ L + G+ + + S D LKIW+
Sbjct: 312 DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 57.8 bits (138), Expect = 4e-10
Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 27/158 (17%)
Query: 59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIE---TKLHMWQISSGRLLATA 115
+ W V Q I+++ P+ A + +L + + +
Sbjct: 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
Query: 116 SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEP 175
+ IT V +S ++ G +D VW + +
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA----------------------DR 304
Query: 176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213
V + H V+ + ++ G VA+ S D KI++
Sbjct: 305 AGVLAGHDNRVSCLGVTDDG--MAVATGSWDSFLKIWN 340
Score = 45.5 bits (106), Expect = 5e-06
Identities = 28/221 (12%), Positives = 56/221 (25%), Gaps = 11/221 (4%)
Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG------ 163
R T H I + W DS +V+ +DG + +W +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL 223
+ ++ S ++L + + + +
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHI-----QDSTSNPDFIGH 278
+ T + V D ++ F GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 279 EKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH 319
E + ++ G + S D T +++ + Q L T H
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
Score = 35.1 bits (79), Expect = 0.009
Identities = 26/178 (14%), Positives = 52/178 (29%), Gaps = 38/178 (21%)
Query: 182 HSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR-LTCVAFDGTEDN 240
H + + + S S D I+D T + ++ L + + A+ + +
Sbjct: 54 HLAKIYAMHWGTDS--RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111
Query: 241 IYMGTSEGVIKSFCLRQVPRT----------------------------------RDHHI 266
+ G + + + L+ I
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 267 QDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPV 323
+ F GH V SLS + +S + D + K+W C +T H+ +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 67.5 bits (163), Expect = 4e-13
Identities = 53/292 (18%), Positives = 95/292 (32%), Gaps = 46/292 (15%)
Query: 79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS------------------SHYQ 120
+ ++ S D Y+A ++++S G L+A S S
Sbjct: 63 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL 122
Query: 121 PITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG--------- 171
I V +S D F+ TG ED I +W + +
Sbjct: 123 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 182
Query: 172 ---------LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS 222
L + G +A+ S DR +++D TG +
Sbjct: 183 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 242
Query: 223 LILDTR--------LTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNP- 273
L + + V F ++ G+ + +K + L+ D +S +
Sbjct: 243 LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 302
Query: 274 DFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
+IGH+ V S++ + +LS S D + W S L +Q H+ V+
Sbjct: 303 TYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354
Score = 58.7 bits (140), Expect = 3e-10
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 7/118 (5%)
Query: 41 SMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIET 99
S L + + ++ + NS + + S+ + + YI S +
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 100 KLHMWQISSGRLLATASSHYQPITIV------KWSADSNFIVTGGEDGTICVWQLSRL 151
+ W SG L H + V + N TG D +W+ ++
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 55.2 bits (131), Expect = 3e-09
Identities = 53/345 (15%), Positives = 86/345 (24%), Gaps = 74/345 (21%)
Query: 7 VAFSYDGS-------GAISVWEPKGGTLLMSYKGASVLSPHSMCLL-------------- 45
V FS DG V+ G+L+ S + L
Sbjct: 68 VKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 127
Query: 46 -----GNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETK 100
G G E I S D T
Sbjct: 128 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT- 186
Query: 101 LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
+ +W + +G+ T S T+ D +I G D + VW +
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER---- 242
Query: 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220
L + H V V ++ G V S S DR+ K+++L +
Sbjct: 243 -----------LDSENESGTGHKDSVYSVVFTRDG--QSVVSGSLDRSVKLWNLQNANNK 289
Query: 221 LS-------------LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ 267
+ + VA ++ I G+ + + + +
Sbjct: 290 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW-----------DKK 338
Query: 268 DSTSNPDFIGHEKQVTSL------SCSITGITLLSSSADETLKIW 306
GH V S+ S + S D +IW
Sbjct: 339 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Score = 49.8 bits (117), Expect = 2e-07
Identities = 21/153 (13%), Positives = 42/153 (27%), Gaps = 39/153 (25%)
Query: 79 GRISSMQASPDAAYIAV-------------SIETKLHMWQISSGRLLATASSHYQPITIV 125
+ S+ + D + + K +SG T H + V
Sbjct: 255 DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 314
Query: 126 KWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLP 185
+ + +I++G +D + W PL + H
Sbjct: 315 ATTQNDEYILSGSKDRGVLFWDKKSG----------------------NPLLMLQGHRNS 352
Query: 186 VTHVTLSKLGAKS----RVASVSHDRTCKIFDL 214
V V ++ + A+ S D +I+
Sbjct: 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 48.6 bits (114), Expect = 5e-07
Identities = 41/274 (14%), Positives = 84/274 (30%), Gaps = 34/274 (12%)
Query: 7 VAFSYDGSGAIS-------VWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPM 59
V FS DG + ++ +S+ + L G
Sbjct: 127 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186
Query: 60 IQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-SIETKLHMWQISSGRL------- 111
++ W + + + + I G + + D YIA S++ + +W +G L
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246
Query: 112 LATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTG 171
+ + H + V ++ D +V+G D ++ +W L K
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS--------- 297
Query: 172 LTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR--- 228
H V V ++ + S S DR +D +G LL L
Sbjct: 298 -GTCEVTYIGHKDFVLSVATTQND--EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354
Query: 229 ----LTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258
+ + G+ + + + +++
Sbjct: 355 SVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 48.3 bits (113), Expect = 7e-07
Identities = 42/243 (17%), Positives = 74/243 (30%), Gaps = 50/243 (20%)
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
H + VK+S D ++ TG + T V+++S + S
Sbjct: 61 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVAR----LSDDSAANKDPENLNTS 115
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSH-------------------------------- 205
L + V S G +
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 175
Query: 206 --------DRTCKIFDLCTG-EDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256
DRT +I+DL TG L I D T G I G+ + ++ +
Sbjct: 176 DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS- 234
Query: 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT 316
T + + N GH+ V S+ + G +++S S D ++K+W+ +
Sbjct: 235 ---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 291
Query: 317 IQH 319
+
Sbjct: 292 SKT 294
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 59.9 bits (143), Expect = 8e-11
Identities = 40/282 (14%), Positives = 70/282 (24%), Gaps = 20/282 (7%)
Query: 71 AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSAD 130
L G + +P I T ++ + S + H T+ K S
Sbjct: 10 PSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS 69
Query: 131 SNFIVTGGEDGTICVWQLSRLICKQTVAF-GIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189
+ +G G + +W ++ G
Sbjct: 70 GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 129
Query: 190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGV 249
S R D + T F+G E
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189
Query: 250 IKSFCLRQVP-------------------RTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT 290
+R P + + H V L+ S
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249
Query: 291 GITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLP 332
G + S+SAD+T+KIW+ + + +TI + LG++
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 291
Score = 38.3 bits (87), Expect = 8e-04
Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 23/97 (23%)
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
H + + WS D I + D TI +W ++ L ++T +
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT-------------------IP 277
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
V ++ + + K + S+S + +
Sbjct: 278 VGTRIEDQQLGIIWT----KQALVSISANGFINFVNP 310
Score = 34.5 bits (77), Expect = 0.013
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRL--TCVAFDGTEDNIYMGTSEGVIK 251
+++AS S D+T KI+++ T + ++ + TR+ + T+ + ++ G I
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306
Score = 28.7 bits (62), Expect = 1.0
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 276 IGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
+G + L T L+S SA+ + +
Sbjct: 278 VGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 59.4 bits (142), Expect = 1e-10
Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 13/259 (5%)
Query: 79 GRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATAS-----SHYQPITIVKWSADSNF 133
+ ++ S ++ + + +W IS + S + I K D
Sbjct: 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111
Query: 134 IVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSK 193
++ GGE T+ +W L+ + + + + S S V
Sbjct: 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171
Query: 194 LGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVI--- 250
R D I G L + LD + + +
Sbjct: 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG 231
Query: 251 -----KSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI 305
+ + + + HE V SL + G +S+ D L
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291
Query: 306 WHTISRQCLRTIQHKGPVL 324
W T + + VL
Sbjct: 292 WRTPYGASIFQSKESSSVL 310
Score = 54.4 bits (129), Expect = 5e-09
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 83 SMQASPDAAYIA-VSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG 141
S++ + + + L+ W+ G + S + S D +IVTG D
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDK 328
Query: 142 TICVWQL 148
V+++
Sbjct: 329 KATVYEV 335
Score = 52.5 bits (124), Expect = 3e-08
Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 25/138 (18%)
Query: 77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVT 136
+I S+ P ++AV +E+ + H + +K++ + V+
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282
Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGA 196
G+D + W+ S+ S V +S
Sbjct: 283 TGKDNLLNAWRTPYGASIFQ-----------------------SKESSSVLSCDISVDD- 318
Query: 197 KSRVASVSHDRTCKIFDL 214
+ + S D+ ++++
Sbjct: 319 -KYIVTGSGDKKATVYEV 335
Score = 43.3 bits (100), Expect = 3e-05
Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 63 WPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI 122
+ S+ + G++ + PDA R + T + H + +
Sbjct: 5 GAMGSKPAYSFHVTADGQMQPVPFPPDALIGP---------GIPRHARQINTLN-HGEVV 54
Query: 123 TIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173
V S + + TGG G + VW +S K V+ + +
Sbjct: 55 CAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCK 104
Score = 38.3 bits (87), Expect = 9e-04
Identities = 8/75 (10%), Positives = 18/75 (24%), Gaps = 2/75 (2%)
Query: 177 HVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDG 236
+ H V + + G S D + G + + +
Sbjct: 259 YQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316
Query: 237 TEDNIYMGTSEGVIK 251
+ I G+ +
Sbjct: 317 DDKYIVTGSGDKKAT 331
Score = 29.0 bits (63), Expect = 0.74
Identities = 17/122 (13%), Positives = 34/122 (27%), Gaps = 7/122 (5%)
Query: 199 RVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQV 258
+ D + +L + V ++Y G +G +K + +
Sbjct: 24 QPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG-GKGCVKVWDIS-- 80
Query: 259 PRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ 318
+ S D + + + S G TL+ TL IW + +
Sbjct: 81 ----HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE 136
Query: 319 HK 320
Sbjct: 137 LT 138
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 58.7 bits (140), Expect = 3e-10
Identities = 27/207 (13%), Positives = 57/207 (27%), Gaps = 26/207 (12%)
Query: 113 ATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGL 172
A S +PI+ W+ D I + + +++ S
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--------------------GNK 40
Query: 173 TEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCV 232
+H +H+ VT V + +R+ + DR ++ L +L++
Sbjct: 41 WVQVHELKEHNGQVTGVDWAPDS--NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA 98
Query: 233 AFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGI 292
N + + + D + V SL +
Sbjct: 99 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC----KHIKKPIRSTVLSLDWHPNSV 154
Query: 293 TLLSSSADETLKIWHTISRQCLRTIQH 319
L + S D +I+ ++
Sbjct: 155 LLAAGSCDFKCRIFSAYIKEVEERPAP 181
Score = 55.2 bits (131), Expect = 3e-09
Identities = 43/242 (17%), Positives = 74/242 (30%), Gaps = 13/242 (5%)
Query: 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGR--LLATASSHYQPITIVKWSADSNFIVTG 137
IS + D IA+ ++H+++ S + + H +T V W+ DSN IVT
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 138 GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK 197
G D VW L K T+ + + V V +
Sbjct: 70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI-------- 121
Query: 198 SRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQ 257
+ CK +LSL +A + + ++ IK R
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY--IKEVEERP 179
Query: 258 VPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTI 317
P + + V + S G + S D T+ + + + T+
Sbjct: 180 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 239
Query: 318 QH 319
Sbjct: 240 AS 241
Score = 41.8 bits (96), Expect = 8e-05
Identities = 16/185 (8%), Positives = 43/185 (23%), Gaps = 25/185 (13%)
Query: 40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET 99
H +C N + + + + + ++ +++ +A +
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDC 264
Query: 100 KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAF 159
++ S + + D
Sbjct: 265 FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE------------- 311
Query: 160 GIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLG--AKSRVASVSHDRTCKIFDLCTG 217
+ S H V+ +++ G S+ + D I+D+ +
Sbjct: 312 ----------GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361
Query: 218 EDLLS 222
E L
Sbjct: 362 ESALK 366
Score = 38.7 bits (88), Expect = 8e-04
Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 9/91 (9%)
Query: 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289
+C A++ I + + + + + H ++ H QVT + +
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK---------EHNGQVTGVDWAP 61
Query: 290 TGITLLSSSADETLKIWHTISRQCLRTIQHK 320
+++ D +W R T+
Sbjct: 62 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL 92
Score = 34.1 bits (76), Expect = 0.024
Identities = 30/209 (14%), Positives = 62/209 (29%), Gaps = 40/209 (19%)
Query: 102 HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161
++ G L+ +SS + V +SA+ + + D T+C+ + +
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV------- 236
Query: 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLL 221
+ +LP+ VT + + HD +F + L
Sbjct: 237 ---------------ATLASETLPLLAVTFITES---SLVAAGHDCFPVLFTYDSAAGKL 278
Query: 222 SLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQ 281
S F G D + G+ + + + + H+
Sbjct: 279 S-----------FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS 327
Query: 282 VTSLSCSITG----ITLLSSSADETLKIW 306
V+ +S G ++ D + IW
Sbjct: 328 VSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 31.4 bits (69), Expect = 0.15
Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Query: 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ---HKGPVLG 325
++ + + + + + I+ + ++ + H G V G
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTG 56
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 53.7 bits (127), Expect = 9e-09
Identities = 25/282 (8%), Positives = 74/282 (26%), Gaps = 39/282 (13%)
Query: 81 ISSMQASPDAAYIAV-SIETKLHMWQISSGRL---LATASSHYQPITIVKWSADSNFIVT 136
IS ++ P + + + S + L +++ L + + P+ + +++ +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 137 GGEDGTICVWQLSRLICKQTVAFGIPGS--------------------------SGKGVT 170
G + + +
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDT--- 227
+ + ++ V + + SR+ ++ + F L ED I ++
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 228 --RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT----RDHHIQDSTSNPDFIGHEKQ 281
++ + +G + + + N
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253
Query: 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV 323
V S+ S L ++ +D + W+ +R+ ++
Sbjct: 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295
Score = 42.9 bits (99), Expect = 3e-05
Identities = 9/52 (17%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWH----TISRQCLRTIQHKGPVL 324
+ ++ + + LL +S D +L ++ + L+++++K P+L
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Score = 41.4 bits (95), Expect = 9e-05
Identities = 5/48 (10%), Positives = 19/48 (39%)
Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV 157
+++ + I+ +K + ++ DG++ V++ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL 49
Score = 40.6 bits (93), Expect = 2e-04
Identities = 19/182 (10%), Positives = 48/182 (26%), Gaps = 20/182 (10%)
Query: 101 LHMWQISSGRLLATA----SSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQT 156
+ +++ YQ + + DG + V
Sbjct: 172 VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231
Query: 157 VAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCT 216
+ + T + + H L + D ++L T
Sbjct: 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY---------TAGSDGIISCWNLQT 282
Query: 217 GEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHH-----IQDSTS 271
+ + + + V +++ + + TS+ K+ + +T + + I
Sbjct: 283 RKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTN--AAIDQTIELNASSIYIIFDYE 340
Query: 272 NP 273
NP
Sbjct: 341 NP 342
Score = 34.4 bits (77), Expect = 0.016
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 96 SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQ 155
+ RL ++ P+ +++S F+ T G DG I W L +
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287
Query: 156 TVAFGIPGSS 165
A S
Sbjct: 288 NFAKFNEDSV 297
Score = 32.1 bits (71), Expect = 0.084
Identities = 32/321 (9%), Positives = 91/321 (28%), Gaps = 35/321 (10%)
Query: 5 NEVAFSYDGS--------GAISVWEPKGGTLLMSYKG-----ASVLSPHSMCLLGNDYVL 51
+++ S G+++V++ + +L + + +
Sbjct: 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74
Query: 52 GVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRL 111
G +G+ + + +A I + D IA S + + + +
Sbjct: 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGD 134
Query: 112 LAT------ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSS 165
+++ I +S+ ++ G + + ++L
Sbjct: 135 GVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY 194
Query: 166 GKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL 225
L S V + + + S + L + L+
Sbjct: 195 QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA--- 251
Query: 226 DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSL 285
+ + F +Y S+G+I + L+ + ++ + + +
Sbjct: 252 -YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA------------KFNEDSVV 298
Query: 286 SCSITGITLLSSSADETLKIW 306
+ + L +++D+T K
Sbjct: 299 KIACSDNILCLATSDDTFKTN 319
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 52.2 bits (123), Expect = 4e-08
Identities = 26/230 (11%), Positives = 64/230 (27%), Gaps = 37/230 (16%)
Query: 114 TASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLT 173
+H I V ++F V+ DG + VW L +
Sbjct: 9 AGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH---------- 56
Query: 174 EPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR----- 228
+H H + V VA+ S + + ++ +I +
Sbjct: 57 -FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS 115
Query: 229 ------LTCVAFDGTEDNIYM-----GTSEGVIKSFCL-------RQVPRTRDHHIQDST 270
+ + + D + +G + + ++
Sbjct: 116 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175
Query: 271 SNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHK 320
+ + + TS+ S G+ + + + T++I + + L + +
Sbjct: 176 TVESPMTPSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQ 224
Score = 42.5 bits (98), Expect = 4e-05
Identities = 41/273 (15%), Positives = 84/273 (30%), Gaps = 36/273 (13%)
Query: 87 SPDAAYIA-VSIETKLHMWQISSGRLLAT----------ASSHYQPITIVKWSADSN--- 132
+ + +A S L ++I+ + +KW A ++
Sbjct: 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135
Query: 133 --FIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT 190
+V GT +W+ + + L + S T V
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTL----NWSPTLELQGTVESPMTPSQFATSVD 191
Query: 191 LSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS-------LILDTRLTCVAFDGTEDNIYM 243
+S+ G +A+ ++ T +I +L T L + + + V F + +
Sbjct: 192 ISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 244 GTSEGVIK-----SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSS 298
+ + S ++ H V SLS + +G TL S+
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308
Query: 299 ADETLKIWHTISRQCLRTIQ-HKGPVLGAFLGL 330
D L+ W +++ + T+ H + L
Sbjct: 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDIL 341
Score = 34.1 bits (76), Expect = 0.020
Identities = 11/61 (18%), Positives = 17/61 (27%), Gaps = 2/61 (3%)
Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAFLGLLPPAIH 336
H+ + S+S +S S D LK+W GL +
Sbjct: 12 AHDADIFSVS--ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 337 D 337
Sbjct: 70 Q 70
Score = 31.7 bits (70), Expect = 0.10
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 9/119 (7%)
Query: 102 HMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGI 161
S + +H + + ++ + + G DG + W + T+
Sbjct: 272 LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN-MH 330
Query: 162 PGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKS--------RVASVSHDRTCKIF 212
L H S V V K G +S + V DR+ + F
Sbjct: 331 CDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 49.1 bits (115), Expect = 2e-07
Identities = 47/299 (15%), Positives = 86/299 (28%), Gaps = 40/299 (13%)
Query: 10 SYDGSGAISVWEPKGGTLLMSYKG--ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNS 67
D + I +W+ G SVL + + + +
Sbjct: 32 LRDNT--IKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 89
Query: 68 QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKW 127
+ R ++ + ++++ I+ R+L +
Sbjct: 90 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV-----V 144
Query: 128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187
D +IV+ D TI VW S E + + H +
Sbjct: 145 DFDDKYIVSASGDRTIKVWNTSTC----------------------EFVRTLNGHKRGIA 182
Query: 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE 247
+ V S S D T +++D+ G L ++ I G +
Sbjct: 183 CLQYRD----RLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRFDNKRIVSGAYD 237
Query: 248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIW 306
G IK + L R + + H +V L ++SSS D+T+ IW
Sbjct: 238 GKIKVWDLVAALDPRAP--AGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIW 292
Score = 43.3 bits (100), Expect = 2e-05
Identities = 39/199 (19%), Positives = 71/199 (35%), Gaps = 20/199 (10%)
Query: 15 GAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLR 74
+I+VW+ T + + + +D + G I+ W ++ E +
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 174
Query: 75 LICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI 134
I+ +Q + + +W I G L H + + +++ D+ I
Sbjct: 175 NGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 231
Query: 135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194
V+G DG I VW L + + A T L +HS V + +
Sbjct: 232 VSGAYDGKIKVWDLVAALDPRAPAG-------------TLCLRTLVEHSGRVFRLQFDE- 277
Query: 195 GAKSRVASVSHDRTCKIFD 213
++ S SHD T I+D
Sbjct: 278 ---FQIVSSSHDDTILIWD 293
Score = 41.4 bits (95), Expect = 1e-04
Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 13/146 (8%)
Query: 9 FSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQ 68
S G I VW + + G CL D ++ I+ W +
Sbjct: 152 VSASGDRTIKVWNTSTCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRLWDIECG 208
Query: 69 EKAQLRLICPGRISSMQASPDAAYIAVS--------IETKLHMWQISSGRLLATASSHYQ 120
++ + ++ + L + L T H
Sbjct: 209 ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 268
Query: 121 PITIVKWSADSNFIVTGGEDGTICVW 146
+ +++ D IV+ D TI +W
Sbjct: 269 RVFRLQF--DEFQIVSSSHDDTILIW 292
Score = 39.8 bits (91), Expect = 3e-04
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
K V L ++S D T+KIW + +C R + H G VL
Sbjct: 13 ETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL 59
Score = 39.1 bits (89), Expect = 5e-04
Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 5/213 (2%)
Query: 110 RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGV 169
+ + S + + +++ D IV+G D TI +W + L CK+ +
Sbjct: 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 170 TGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRL 229
T L + T S+ +
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123
Query: 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQ---DSTSNPDFIGHEKQVTSLS 286
+ + + V+ V + D I+ ST + +
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 183
Query: 287 CSITGITLLSSSADETLKIWHTISRQCLRTIQH 319
++S S+D T+++W CLR ++
Sbjct: 184 LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 216
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 48.6 bits (114), Expect = 4e-07
Identities = 32/339 (9%), Positives = 87/339 (25%), Gaps = 35/339 (10%)
Query: 5 NEVAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGN-DYVLGVEKGKPMIQAW 63
+E + + V + T+ S P + + + + I
Sbjct: 8 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 67
Query: 64 PVNSQE------KAQLRLICPGRISSMQASPDAAYIAVSIE-------------TKLHMW 104
+++ + + + + S SPD + ++ +L ++
Sbjct: 68 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 127
Query: 105 QISSGRLLATASSHYQP--ITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIP 162
+ G + P + +++ + D + V G + + V +
Sbjct: 128 STADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK--TGKYTVALPLRNWN 185
Query: 163 GSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS 222
L H +H + + K A+ DL TG+
Sbjct: 186 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ 245
Query: 223 LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQV 282
D + + + + + + +
Sbjct: 246 EFADLTELYFTGLRSPKDPNQ-----IYGVLNRLAKYDLKQRKLIKA------ANLDHTY 294
Query: 283 TSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKG 321
++ G L L +++ + + ++ I+ G
Sbjct: 295 YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 333
Score = 34.3 bits (77), Expect = 0.017
Identities = 12/211 (5%), Positives = 41/211 (19%), Gaps = 29/211 (13%)
Query: 125 VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184
A +++ + V ++ ++ +P G
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV--MPDKFG------------------ 41
Query: 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDL-------CTGEDLLSLILDTRLTCVAFDGT 237
++ + V + +H DL + + + A
Sbjct: 42 -PGTAMMAPDNRTAYVLN-NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD 99
Query: 238 EDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS 297
+Y + + P + + +
Sbjct: 100 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLY 159
Query: 298 SADETLKIWHTISRQCLRTIQHKGPVLGAFL 328
A + + + + + +
Sbjct: 160 VAGPDIYKMDVKTGKYTVALPLRNWNRKGYS 190
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 47.9 bits (112), Expect = 8e-07
Identities = 30/226 (13%), Positives = 62/226 (27%), Gaps = 5/226 (2%)
Query: 104 WQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPG 163
W+ + H + N IV+G +D T+ VW C +T+ G
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 164 -SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLS 222
S + + + ++V + + D
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 223 LILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRT-RDHHIQDSTSNPDFIGHEKQ 281
+ D + + + + + T GH +
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179
Query: 282 VTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAF 327
V S GI ++S S D ++++W + C+ T+ +
Sbjct: 180 VY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 223
Score = 45.2 bits (105), Expect = 5e-06
Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 61/325 (18%)
Query: 10 SYDGSGAISVWEPKGGTLLMSYKG-----ASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP 64
S D + + VW G L + G S ++ + G+ +
Sbjct: 34 SDDNT--LKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH 91
Query: 65 VNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITI 124
+ +R + + S DA IET + + +
Sbjct: 92 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL-----------MGHVAAV 140
Query: 125 VKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSL 184
D +V+G D + VW C T+ H+
Sbjct: 141 RCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL----------------------QGHTN 178
Query: 185 PVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMG 244
V + V S S D + +++D+ TG + +L LT + ++ + G
Sbjct: 179 RVYSLQFDG----IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMELKDNILVSG 233
Query: 245 TSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLK 304
++ +K + ++ + + + +++SS D T+K
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC----------LQFNKNFVITSSDDGTVK 283
Query: 305 IWHTISRQCLRTI------QHKGPV 323
+W + + +R + G V
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVV 308
Score = 44.4 bits (103), Expect = 1e-05
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 12/152 (7%)
Query: 7 VAFSYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVN 66
V+ S D S I VW+ + G + + G L+ M L N V G I
Sbjct: 191 VSGSLDTS--IRVWDVETGNCIHTLTGHQSLT-SGMELKDNILVSGNADSTVKIWDIKTG 247
Query: 67 SQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT-----ASSHYQP 121
+ + I S + + +W + +G + +
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307
Query: 122 ITIVKWSADSNFIVTGGEDGT----ICVWQLS 149
+ ++ S G +GT + V
Sbjct: 308 VWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339
Score = 41.7 bits (96), Expect = 7e-05
Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 40/212 (18%)
Query: 101 LHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
+ +W + L T H + D +V+G D +I VW + C
Sbjct: 159 VKVWDPETETCLHTLQGH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC------- 209
Query: 161 IPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDL 220
+H + H + + L + + S + D T KI+D+ TG+ L
Sbjct: 210 ---------------IHTLTGHQSLTSGMELKD----NILVSGNADSTVKIWDIKTGQCL 250
Query: 221 LSLILDTRLT--CVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGH 278
+L + ++ + + +G +K + L+ + + G
Sbjct: 251 QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK------TGEFIRNLVTLESGGS 304
Query: 279 EKQVTSLSCSITGITLLSSSADET----LKIW 306
V + S T + S + T L +
Sbjct: 305 GGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 37.1 bits (84), Expect = 0.002
Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 28/209 (13%)
Query: 11 YDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEK 70
+ VW+P+ T L + +G + +S+ G V G I+ W V +
Sbjct: 153 GAYDFMVKVWDPETETCLHTLQGHTN-RVYSLQFDGIHVVSGSLDTS--IRVWDVETGNC 209
Query: 71 AQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPI-TIVKWSA 129
S M+ + + T + +W I +G+ L T + +
Sbjct: 210 IHTLTGHQSLTSGMELKDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 268
Query: 130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189
+ NF++T +DGT+ +W L + + V +
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNL-----------------VTLESGGSGGVVWRI 311
Query: 190 TLSKLGAKSRVASVSHDRT----CKIFDL 214
S A S + T + D
Sbjct: 312 RASNTK--LVCAVGSRNGTEETKLLVLDF 338
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 47.3 bits (110), Expect = 1e-06
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 109 GRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
G + H + IT + SAD + + +G I W +S I +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 53
Score = 44.2 bits (102), Expect = 1e-05
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ--HKGPVLG 325
GH K +T+LS S G TL S+ A+ + W + R H + G
Sbjct: 10 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60
Score = 41.5 bits (95), Expect = 9e-05
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 92 YIAVSIETKLHMWQISSG---RLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQL 148
S++ + +W ++ ++ + + V W + IV+ G+D I W +
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNV 297
Query: 149 S 149
Sbjct: 298 P 298
Score = 34.6 bits (77), Expect = 0.015
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 176 LHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLIL--DTRLTCVA 233
V+ H+ +T ++ S G + S + +D+ TG T +T +
Sbjct: 5 DQVRYGHNKAITALSSSADG--KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 234 FDGTEDNIYMGTSEGVI 250
D + + +
Sbjct: 63 TTSKGDLFTVSWDDHLK 79
Score = 32.6 bits (72), Expect = 0.055
Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 22/97 (22%)
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
H + V WS D+ + TG D ++ VW ++ P+
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMN--------------------KPSDHPII 262
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
+K H++ + + + + S D K +++
Sbjct: 263 IKGAHAMSSVNSVIWLNE--TTIVSAGQDSNIKFWNV 297
Score = 30.3 bits (66), Expect = 0.29
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIW 306
H + + T++S+ D +K W
Sbjct: 266 AHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 46.0 bits (107), Expect = 3e-06
Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 36/159 (22%)
Query: 78 PGRISSMQASPDAAYIAVS--------IETKLHMWQISSGRLLATASSHYQPITIVKWSA 129
PG + + P + + R++ S ++
Sbjct: 227 PGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGE 286
Query: 130 DSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHV 189
+ + E G + + + + VT + +T +
Sbjct: 287 FAAYYQGAPEKGVLLKYDVK----------------TRKVTEVKNN----------LTDL 320
Query: 190 TLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTR 228
LS V D F L ED ++ D R
Sbjct: 321 RLSADR--KTVMVRKDDGKIYTFPLEKPEDERTVETDKR 357
Score = 41.4 bits (95), Expect = 1e-04
Identities = 22/322 (6%), Positives = 61/322 (18%), Gaps = 38/322 (11%)
Query: 7 VAFSYDGSGAISVWEPKGGTLLMSYKGA--------SVLSPHSMCLLGNDYVLGVEKGKP 58
+ +++ + G + ++ ++ V+
Sbjct: 58 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117
Query: 59 MIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSH 118
+ + I P + GR + A++
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177
Query: 119 YQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHV 178
+ ADS + + V
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRV---------------VLNFSFEVVSKPFV 222
Query: 179 KSQHSLPVTHVTLSKLGAKSRVASVSHDRT---CKIFDLCTGEDLLSLILDTRLTCVAFD 235
L S + ++ G+ + + L++ + +
Sbjct: 223 IPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP 282
Query: 236 GTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL 295
+ + +T L S T++
Sbjct: 283 VHGEFAAYYQGAPEKGVLLKY------------DVKTRKVTEVKNNLTDLRLSADRKTVM 330
Query: 296 SSSADETLKIWHTISRQCLRTI 317
D + + + RT+
Sbjct: 331 VRKDDGKIYTFPLEKPEDERTV 352
Score = 38.3 bits (87), Expect = 0.001
Identities = 24/241 (9%), Positives = 52/241 (21%), Gaps = 31/241 (12%)
Query: 87 SP-DAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDG--TI 143
SP D IA + + +S +L I V+ D+ G +
Sbjct: 11 SPLDGDLIAFVSRGQAFIQDVSGTYVLKVP--EPLRIRYVRRGGDTKVAFIHGTREGDFL 68
Query: 144 CVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASV 203
++ T ++ V + + + G + VA+
Sbjct: 69 GIYDYR-----------------------TGKAEKFEENLGNVFAMGVDRNGKFAVVAND 105
Query: 204 SHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRD 263
+ + + D + Y + + Q D
Sbjct: 106 RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 165
Query: 264 HHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPV 323
+ + + L S + + K V
Sbjct: 166 MEGRKIF---AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFV 222
Query: 324 L 324
+
Sbjct: 223 I 223
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 44.9 bits (104), Expect = 6e-06
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 77 CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLL-ATASSHYQPITIVKWSADSNFIV 135
+ + E + +++ + SG+L+ A I V + +
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVA 339
Query: 136 TGGEDGTICVWQLS 149
+DG + L
Sbjct: 340 AVEKDGQSFLEILD 353
Score = 40.6 bits (93), Expect = 2e-04
Identities = 9/50 (18%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 277 GHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVLG 325
GH V + +++ + D+ ++++ +I+++ L + H G V
Sbjct: 10 GHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWA 58
Score = 36.8 bits (83), Expect = 0.003
Identities = 29/319 (9%), Positives = 86/319 (26%), Gaps = 24/319 (7%)
Query: 10 SYDGSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVL--GVEKGKPMIQAWPVNS 67
+ D I V++ L+ G ++ ++ ++ +
Sbjct: 30 ADDKM--IRVYDSINKKFLLQLSGHD-GGVWALKYAHGGILVSGSTDRTVRVWDIKKGCC 86
Query: 68 QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKW 127
+ + ++ + S + LH+W++ + + +
Sbjct: 87 THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 146
Query: 128 SADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVT 187
++ + V V + + + V + + +
Sbjct: 147 PEENPYFVGVLRGHMASVRTV---SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR 203
Query: 188 HVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSE 247
+ + R S S D T +I+DL GE + + +
Sbjct: 204 IYSTIYDHERKRCISASMDTTIRIWDLENGEL--------------MYTLQGHTALVGLL 249
Query: 248 GVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWH 307
+ F + + + F H +++++ +L S ++ I++
Sbjct: 250 RLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYN 309
Query: 308 TISRQCLRTI--QHKGPVL 324
S + + + +
Sbjct: 310 LRSGKLVHANILKDADQIW 328
Score = 34.5 bits (77), Expect = 0.015
Identities = 12/97 (12%), Positives = 26/97 (26%), Gaps = 24/97 (24%)
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
H+ ++ + S+ I+ G + ++ L
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILK----------------- 322
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
+ + V K+ VA+V D + L
Sbjct: 323 ----DADQIWSVNFK---GKTLVAAVEKDGQSFLEIL 352
Score = 34.1 bits (76), Expect = 0.023
Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 25/203 (12%)
Query: 87 SPDAAYIAV-SIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICV 145
+ Y+ + + + ++ + + L S H + +K++ +V+G D T+ V
Sbjct: 20 QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRV 78
Query: 146 WQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSH 205
W + + C HV H+ V + + + + + S
Sbjct: 79 WDIKKGCCT----------------------HVFEGHNSTVRCLDIVEYKNIKYIVTGSR 116
Query: 206 DRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKS-FCLRQVPRTRDH 264
D T ++ L + + V E+ ++G G + S +
Sbjct: 117 DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 176
Query: 265 HIQDSTSNPDFIGHEKQVTSLSC 287
D+T + K + LS
Sbjct: 177 GSYDNTLIVWDVAQMKCLYILSG 199
Score = 33.7 bits (75), Expect = 0.029
Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 11/124 (8%)
Query: 198 SRVASVSHDRTCKIFDLCTGEDLLSLIL-DTRLTCVAFDGTEDNIYMGTSEGVIKSFCLR 256
+ V + + D+ +++D + LL L D + + + G++ S
Sbjct: 24 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY----------AHGGILVSGSTD 73
Query: 257 QVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRT 316
+ R D T + + + +++ S D TL +W +
Sbjct: 74 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD 133
Query: 317 IQHK 320
+
Sbjct: 134 HGEE 137
Score = 33.3 bits (74), Expect = 0.032
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 127 WSADSNFIVTGGEDGTICVWQLSRLICKQT 156
+ N+++TG +D I V+
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQ 48
Score = 27.2 bits (58), Expect = 2.9
Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 198 SRVASVSHDRTCKIFDLCTGEDLLSLILD--TRLTCVAFDG 236
+ + I++L +G+ + + IL ++ V F G
Sbjct: 294 DNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG 334
Score = 27.2 bits (58), Expect = 3.6
Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 11/77 (14%)
Query: 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289
+ + DNI + SE + LR + + Q+ S++
Sbjct: 285 SAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA----------NILKDADQIWSVNFKG 334
Query: 290 TGITLLSSSADETLKIW 306
+ + + D +
Sbjct: 335 KTL-VAAVEKDGQSFLE 350
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 44.0 bits (102), Expect = 2e-05
Identities = 31/296 (10%), Positives = 75/296 (25%), Gaps = 27/296 (9%)
Query: 49 YVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET--------- 99
YV + Q + ++ + + +I G + + + D ++IA +
Sbjct: 17 YVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGER 76
Query: 100 --KLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTV 157
+ ++ + A P +V + T+ +Q S
Sbjct: 77 TDYVEVFDPVTLLPTADIELPDAPRFLVGT--YPWMTSLTPDGKTLLFYQFSP----APA 130
Query: 158 AFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTG 217
+ L P + P T + G+ ++VA + T +I
Sbjct: 131 VGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAF-GTEGTPEITHTEVF 189
Query: 218 EDLLSLILDT--------RLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDS 269
+++ RL + G I + + + R +
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249
Query: 270 TSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG 325
H +A + + + + L + +
Sbjct: 250 GWQQ-VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDS 304
Score = 39.4 bits (90), Expect = 5e-04
Identities = 20/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%)
Query: 82 SSMQASPDAAYIAVSIETKLHMWQISSGRL--LATASSHYQPITIVKWSADSNFIVTGGE 139
+ + + K+H +SSG L + + W V
Sbjct: 199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 258
Query: 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSR 199
+ + + T K + + + +S+
Sbjct: 259 ALDRIYL---LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLL 315
Query: 200 VASVSHDRTCKIFDLCTGEDLLSL 223
A + D+T I D +GE+L S+
Sbjct: 316 YALSTGDKTLYIHDAESGEELRSV 339
Score = 39.4 bits (90), Expect = 5e-04
Identities = 35/329 (10%), Positives = 75/329 (22%), Gaps = 75/329 (22%)
Query: 10 SYDGSGAISVWEPKGGTLL------MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAW 63
+ + + V++P + + P L + L + P
Sbjct: 73 RGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVG 132
Query: 64 PVNSQEKAQLRLI---------CPGRISSMQASPDAAYIAVSIETKLHMWQISSGRLLAT 114
V+ + KA R++ + D + V+ T+
Sbjct: 133 VVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT---HTEVF 189
Query: 115 ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE 174
I +S + +V G I LS +G +
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLS--------------------SGDAK 229
Query: 175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
L + + + + ++
Sbjct: 230 FLPAVEALTEAERADGWRP--GGWQQVAYHRALDRIYLLVDQRDEWRH----------KT 277
Query: 235 DGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITL 294
+ + + ++ S++ S L
Sbjct: 278 ASRFVVVLDAKTGERLAK-----------------------FEMGHEIDSINVSQDEKPL 314
Query: 295 L--SSSADETLKIWHTISRQCLRTIQHKG 321
L S+ D+TL I S + LR++ G
Sbjct: 315 LYALSTGDKTLYIHDAESGEELRSVNQLG 343
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 43.0 bits (99), Expect = 3e-05
Identities = 31/309 (10%), Positives = 73/309 (23%), Gaps = 74/309 (23%)
Query: 79 GRISSMQASPDAAYIAVSI--ETKLHMWQISSGRLLATAS---SHYQPITIVKWS--ADS 131
+ + P IA + ++ +T VK+S S
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
++ +G E G + VW + +V + P++ ++
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEV--------------NVKSEFQVLAGPISDISW 123
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIK 251
G + V D +G ++ + ++ +
Sbjct: 124 DFEGRRLCVVGEGRDNFGVFISWDSGNS------LGEVSGHSQRINACHLKQSRPMRSMT 177
Query: 252 SFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSIT--------------------- 290
V + + S S+ V + S
Sbjct: 178 VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS 237
Query: 291 -------------------------GITLLSSSADETLKIWHTISRQCLRTIQ-HKGPVL 324
+ AD T+++W + +C++ K +
Sbjct: 238 GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 297
Query: 325 GAFLGLLPP 333
+G++
Sbjct: 298 NQQVGVVAT 306
Score = 39.1 bits (89), Expect = 6e-04
Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 21/97 (21%)
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
Q DS T G D TI VW ++ C Q
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD----------------- 292
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDL 214
+ L V + G R+ S+S D T ++L
Sbjct: 293 ---KQQLGNQQVGVVATG-NGRIISLSLDGTLNFYEL 325
Score = 30.7 bits (67), Expect = 0.24
Identities = 15/122 (12%), Positives = 31/122 (25%), Gaps = 20/122 (16%)
Query: 116 SSHYQPITIVKWSADSNFIVTG-GEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTE 174
S+ T + + +N I G+ + V F
Sbjct: 14 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQF--------------- 58
Query: 175 PLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTCVAF 234
S VT V S + + S ++ ++ S+ ++ +
Sbjct: 59 ----TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 114
Query: 235 DG 236
G
Sbjct: 115 AG 116
Score = 28.3 bits (61), Expect = 1.3
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 198 SRVASVSHDRTCKIFDLCTGEDLLSLILDT---RLTCVAFDGTEDN-IYMGTSEGVIK 251
+ A+V D T +++D+ T + + LD V T + I + +G +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 321
Score = 26.0 bits (55), Expect = 6.4
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 277 GHEKQVTSLSCSITG-ITLLSSSADETLKIW 306
+ + TG ++S S D TL +
Sbjct: 293 KQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 42.9 bits (99), Expect = 3e-05
Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 3/151 (1%)
Query: 20 WEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPG 79
+P + ++ + V++ + + + + + E A +
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240
Query: 80 RISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGE 139
A A A L + + + V S D + + GG
Sbjct: 241 VFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGA 299
Query: 140 DGTICVWQLSRLICKQTVAFGIPGSSGKGVT 170
G + + L K V +PG++ +
Sbjct: 300 LGDLAAYDAETLEKKGQVD--LPGNASMSLA 328
Score = 34.4 bits (77), Expect = 0.016
Identities = 22/183 (12%), Positives = 49/183 (26%), Gaps = 27/183 (14%)
Query: 132 NFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTL 191
++I+ + V ++ + + G + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPT--------------------PMVPMV 41
Query: 192 SKLGAKSRVASVSHDRTCKIFDLCTGEDLLSLILDTRLTC------VAFDGTEDNIYMGT 245
+ G + + + DL TGE L + L T A + +
Sbjct: 42 APGGRIAYATV-NKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYE 100
Query: 246 SEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKI 305
S ++ P + ++ S +Q+T L+ + G L D +
Sbjct: 101 SPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMD 160
Query: 306 WHT 308
Sbjct: 161 PEA 163
Score = 30.2 bits (66), Expect = 0.39
Identities = 14/143 (9%), Positives = 27/143 (18%), Gaps = 26/143 (18%)
Query: 81 ISSMQASPDAAYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGED 140
+ T L + +G + + + G
Sbjct: 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF-YFSTAVNPAKTRAFGAY 259
Query: 141 GTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRV 200
+ + L + + V V +S G S V
Sbjct: 260 NVLESFDLEKNASIKRV-----------------------PLPHSYYSVNVSTDG--STV 294
Query: 201 ASVSHDRTCKIFDLCTGEDLLSL 223
+D T E +
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQV 317
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 40.0 bits (92), Expect = 3e-04
Identities = 24/297 (8%), Positives = 57/297 (19%), Gaps = 60/297 (20%)
Query: 63 WPVNSQEKAQLRLICPGRISSMQASPDAAYIAV-----------SIETKLHMWQISSGRL 111
+ ++ K L I G +PD V + + + ++
Sbjct: 1 YVYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDH 60
Query: 112 LATASSHYQPIT------IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGS- 164
+ +SAD + V + + K
Sbjct: 61 AGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACV 120
Query: 165 ---------------SGKGV------TGLTEPLHVKSQHSLPVTHVTLSKLGA-KSRVAS 202
SGK + G + K
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLF 180
Query: 203 VSHDRTCKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTR 262
++ + D + AF + + ++Q
Sbjct: 181 TTYGGNVRSADFSGDK-------------PAFGKPWSLLTDAERAEGWRPGGMQQTAVQA 227
Query: 263 DHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQH 319
+ + G K + + +++Q + +
Sbjct: 228 KQNRYYVLMHKGTDGSHKDP-------GTQVWVYDLKSKQRVARWDLAQQKVEPLVS 277
Score = 31.1 bits (69), Expect = 0.17
Identities = 26/251 (10%), Positives = 58/251 (23%), Gaps = 34/251 (13%)
Query: 102 HMWQISSGRLLATASSHYQPI--------TIVKWSADSNFIVTGGEDGTICVWQLSRLIC 153
+++ + +LL + P V + + G + + + L
Sbjct: 1 YVYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDH 60
Query: 154 KQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVT-LSKLGAKSRVASVSHDRTCKIF 212
+ + K +P + T S G R+ + +
Sbjct: 61 AGEI-----------------VIPAKHAQHVPSPYNTAFSADGK--RLYVANITPAASVT 101
Query: 213 DLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSN 272
+ L CV D+ + E V + T +
Sbjct: 102 VIDAVS-KKMLSEIDTAACVLAYPAGDDRFTALCESGKALT----VTLDANGKEAKRTMS 156
Query: 273 PDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLGAF-LGLL 331
FI +K ++ S L ++ ++ + G
Sbjct: 157 DAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWR 216
Query: 332 PPAIHDYDFTP 342
P +
Sbjct: 217 PGGMQQTAVQA 227
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 39.5 bits (90), Expect = 4e-04
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 102 HMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLSRLICKQTVAFG 160
M + ++ A P I + D + V T+ V + T+A G
Sbjct: 227 SMIDTGTNKITARIPVGPDPAGIA-VTPDGKKVYVALSFCNTVSVIDTATNTITATMAVG 285
Score = 38.3 bits (87), Expect = 0.001
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 91 AYIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFI-VTGGEDGTICVWQLS 149
AYIA S + + ++S ++ AT P+ V S D + V + + +
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDTA 62
Query: 150 RLICKQ 155
Sbjct: 63 TNNVIA 68
Score = 37.5 bits (85), Expect = 0.002
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Query: 253 FCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLL-SSSADETLKIWHTISR 311
+ + T + I ++ + G + + S T+ + T +
Sbjct: 217 TNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276
Query: 312 QCLRTIQ-HKGPV-LGAFLGLLP 332
T+ K P G F+G +P
Sbjct: 277 TITATMAVGKNPYASGQFIGSIP 299
Score = 25.6 bits (54), Expect = 8.6
Identities = 14/83 (16%), Positives = 21/83 (25%), Gaps = 24/83 (28%)
Query: 135 VTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVKSQHSLPVTHVTLSKL 194
+ E I V ++ T+ G +S
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGS-----------------------NPMGAVISPD 42
Query: 195 GAKSRVASVSHDRTCKIFDLCTG 217
G K VA+ +H I D T
Sbjct: 43 GTKVYVAN-AHSNDVSIIDTATN 64
Score = 25.6 bits (54), Expect = 9.7
Identities = 5/33 (15%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 296 SSSADETLKIWHTISRQCLRTIQ-HKGPVLGAF 327
++S + + + S + TI P+
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVI 39
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 38.4 bits (87), Expect = 7e-04
Identities = 11/96 (11%), Positives = 26/96 (27%), Gaps = 24/96 (25%)
Query: 118 HYQPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLH 177
+ + + + TG D I ++ + R + +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR---------------------PMKIIK 252
Query: 178 VKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFD 213
+ H V ++ S + S D K ++
Sbjct: 253 ALNAHKDGVNNLLWET---PSTLVSSGADACIKRWN 285
Score = 36.9 bits (83), Expect = 0.002
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 108 SGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS 149
+L T S H + IT + + +++G DG I W S
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS 39
Score = 34.2 bits (76), Expect = 0.019
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Query: 275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQCLRTIQHKGPVLG 325
GH K +T+L+ + L+S S D + W + S H ++
Sbjct: 9 ISGHNKGITALTVN----PLISGSYDGRIMEWSSSSMHQ----DHSNLIVS 51
Score = 33.8 bits (75), Expect = 0.025
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 275 FIGHEKQVTSLSCSITGITLLSSSADETLKIWHTI 309
H+ V +L TL+SS AD +K W+ +
Sbjct: 254 LNAHKDGVNNLLWETPS-TLVSSGADACIKRWNVV 287
Score = 33.4 bits (74), Expect = 0.032
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 171 GLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGE 218
G E L S H+ +T +T++ L S S+D + +
Sbjct: 1 GHDEVLKTISGHNKGITALTVNPL------ISGSYDGRIMEWSSSSMH 42
Score = 28.8 bits (62), Expect = 1.1
Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 2/98 (2%)
Query: 230 TCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSI 289
+ ++ +E I G G I + L+ ++ + + I
Sbjct: 166 SYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEI 225
Query: 290 TGITLLSSSADETLKIWHT-ISRQCLRTIQ-HKGPVLG 325
+ + S D + I+ + ++ + HK V
Sbjct: 226 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN 263
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 38.4 bits (88), Expect = 8e-04
Identities = 34/342 (9%), Positives = 78/342 (22%), Gaps = 52/342 (15%)
Query: 10 SYDGSGAISVWEPKGGTLL----MSYKGASVLSP-HSMCLLGNDYVLGVEKGKP--MIQA 62
+ G+ V G L ++ +V S L + KGK ++
Sbjct: 41 YFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100
Query: 63 WPVNSQEKAQ-------LRLICPGRISSMQASPDAAYIAVSIETK--LHMWQISSGRLLA 113
+ + R R+ + +A + + +
Sbjct: 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160
Query: 114 T-------ASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLS---RLICKQTVAFGIPG 163
T S ++ + + +
Sbjct: 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQAN 220
Query: 164 SSGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL 223
G V + + + T R A G +++
Sbjct: 221 YPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRS---------AGFQMVAK 271
Query: 224 ILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVT 283
+ +T + + + + Q I +
Sbjct: 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP--------------ISNGHDSD 317
Query: 284 SLSCSITGITLL--SSSADETLKIWHTISRQCLRTIQ-HKGP 322
++ + G + +S+ E L I+ S Q +++ KGP
Sbjct: 318 AIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359
Score = 33.4 bits (75), Expect = 0.035
Identities = 24/224 (10%), Positives = 56/224 (25%), Gaps = 15/224 (6%)
Query: 7 VAFSYDGSGAISVWEPKGGTLL--MSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWP 64
+ F GS A + G + + P + + LG
Sbjct: 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGA----AATHYLGSCPASLAASDLA 193
Query: 65 VNS----QEKAQLRLICPGRISSMQASPDAAYIAVSIETKLHM-WQISSGRLLATASSHY 119
AQ + QA+ + + L + + A +
Sbjct: 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNE 253
Query: 120 QPITIVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFGIPGSSGKGVTGLTEPLHVK 179
+ + +V ++ + + + + VT
Sbjct: 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVE----HSRSCLAAAENTSSVTASVGQTSGP 309
Query: 180 SQHSLPVTHVTLSKLGAKSRVASVSHDRTCKIFDLCTGEDLLSL 223
+ + ++ GA A+ + I+D + +D S+
Sbjct: 310 ISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 35.7 bits (81), Expect = 0.007
Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 92 YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQLSRL 151
+ + ++ + S +++ + Y I + SA +++ G D I + L
Sbjct: 35 SVTLRDAGQIALVDGDSKKIVKVIDTGYAV-HISRMSASGRYLLVIGRDARIDMIDLWAK 93
Query: 152 ICKQT 156
+
Sbjct: 94 EPTKV 98
Score = 25.7 bits (55), Expect = 8.7
Identities = 6/37 (16%), Positives = 12/37 (32%)
Query: 124 IVKWSADSNFIVTGGEDGTICVWQLSRLICKQTVAFG 160
+ + F VT + G I + + + G
Sbjct: 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG 61
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 35.5 bits (81), Expect = 0.008
Identities = 9/57 (15%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 92 YIAVSIETKLHMWQISSGRLLATASSHYQPITIVKWSADSNFIVTGGEDGTICVWQL 148
+ + ++ + S+ + + Y I + SA ++ G DG + + L
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVIGRDGKVNMIDL 90
Score = 26.7 bits (58), Expect = 5.5
Identities = 48/380 (12%), Positives = 97/380 (25%), Gaps = 78/380 (20%)
Query: 13 GSGAISVWEPKGGTLLMSYKGASVLSPHSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQ 72
+G I++ + + + H L + L V + + +E
Sbjct: 40 DAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT 97
Query: 73 LRLICPGR-----ISSMQASPDAAYIAVSIE--TKLHMWQISSGRLLATASSHYQPITIV 125
+ I G +S + Y + + + S+
Sbjct: 98 VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ 157
Query: 126 KWSADSN------------FIVTGGEDGTICVWQLSRLICKQTVA---------FGIPGS 164
++ + FIV E G I + + L +T G+ GS
Sbjct: 158 EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 217
Query: 165 SGKGVTGLTEPLHVKSQHSLPVTHVTLSKLGAK----SRVASVSHDRTCKIFD-LCTGED 219
+T + + V + G + R A+ H ++ G+D
Sbjct: 218 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDD 277
Query: 220 LLSLI--------------------LDTRLTCVAFDGTEDNIYMGTSEG----------V 249
++LI L + +Y+ + V
Sbjct: 278 SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV 337
Query: 250 IKSFCLRQVPRTRDHHIQDSTSNPDFIGHEKQVTSLSCSITGITLLSS--------SA-- 299
+ + + +V + G + S SA
Sbjct: 338 FDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALV 397
Query: 300 ---DETLKIWHTISRQCLRT 316
D+TL++ H I + L T
Sbjct: 398 VVDDKTLELKHVIKDERLVT 417
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus
subtilis [TaxId: 1423]}
Length = 167
Score = 26.5 bits (57), Expect = 3.7
Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 10/164 (6%)
Query: 159 FGIPG-SSGKGVTGLTEPLHVKSQHSLPVTHVT---------LSKLGAKSRVASVSHDRT 208
+G G ++ V L + + S+ VT T + VAS +
Sbjct: 1 YGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA 60
Query: 209 CKIFDLCTGEDLLSLILDTRLTCVAFDGTEDNIYMGTSEGVIKSFCLRQVPRTRDHHIQD 268
+++S T A + + G + L ++ +
Sbjct: 61 ADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSG 120
Query: 269 STSNPDFIGHEKQVTSLSCSITGITLLSSSADETLKIWHTISRQ 312
T + S+ GI + D +W +S
Sbjct: 121 LTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSD 164
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 26.7 bits (57), Expect = 4.5
Identities = 6/72 (8%), Positives = 21/72 (29%)
Query: 40 HSMCLLGNDYVLGVEKGKPMIQAWPVNSQEKAQLRLICPGRISSMQASPDAAYIAVSIET 99
S ++ + + Q + + K + + D I S
Sbjct: 194 VSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGG 253
Query: 100 KLHMWQISSGRL 111
++++ + ++
Sbjct: 254 SIYIFNPDTEKI 265
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.133 0.407
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,226,786
Number of extensions: 53076
Number of successful extensions: 343
Number of sequences better than 10.0: 1
Number of HSP's gapped: 262
Number of HSP's successfully gapped: 125
Length of query: 343
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 257
Effective length of database: 1,226,816
Effective search space: 315291712
Effective search space used: 315291712
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.2 bits)