Query psy10876
Match_columns 319
No_of_seqs 189 out of 1443
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 20:41:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 6.5E-27 2.2E-31 216.0 16.6 195 48-257 10-217 (280)
2 1xhb_A Polypeptide N-acetylgal 96.8 0.083 2.8E-06 50.8 18.5 193 49-247 27-248 (472)
3 4hg6_A Cellulose synthase subu 96.7 0.17 5.6E-06 52.5 21.1 191 48-248 137-359 (802)
4 4fix_A UDP-galactofuranosyl tr 95.9 0.12 4E-06 52.5 14.6 194 48-247 177-407 (657)
5 1qg8_A Protein (spore coat pol 95.9 0.19 6.5E-06 43.5 14.0 182 53-243 3-201 (255)
6 2d7i_A Polypeptide N-acetylgal 95.7 0.17 5.8E-06 50.2 14.2 191 50-247 111-328 (570)
7 3bcv_A Putative glycosyltransf 95.6 0.25 8.4E-06 42.2 13.7 187 52-247 6-215 (240)
8 2ffu_A Ppgalnact-2, polypeptid 95.4 0.4 1.4E-05 46.4 15.8 190 50-248 65-281 (501)
9 2z86_A Chondroitin synthase; G 94.1 0.71 2.4E-05 45.8 13.8 192 51-249 93-322 (625)
10 2z86_A Chondroitin synthase; G 93.0 1.8 6.3E-05 42.8 14.8 187 51-250 375-565 (625)
11 2bo4_A Mannosylglycerate synth 79.3 42 0.0014 31.5 14.7 166 82-249 28-209 (397)
12 2c0n_A A197; thermophil protei 74.3 26 0.00087 29.9 10.0 100 137-243 51-162 (203)
13 3ckj_A Putative uncharacterize 68.0 32 0.0011 30.8 10.1 185 49-245 46-251 (329)
14 3f1y_A Mannosyl-3-phosphoglyce 54.8 35 0.0012 31.7 8.0 113 129-245 169-296 (387)
15 2fy7_A Beta-1,4-galactosyltran 39.7 54 0.0018 29.1 6.3 93 136-247 126-218 (287)
16 3l7i_A Teichoic acid biosynthe 39.6 6.2 0.00021 40.0 0.0 112 129-243 73-191 (729)
17 2eqg_A Tumor necrosis factor, 23.4 11 0.00036 24.0 -0.9 34 36-69 4-40 (49)
18 2l82_A Designed protein OR32; 22.6 1.1E+02 0.0038 23.3 4.4 52 57-111 55-106 (162)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.95 E-value=6.5e-27 Score=216.00 Aligned_cols=195 Identities=18% Similarity=0.221 Sum_probs=131.6
Q ss_pred CCCeeEEEEEECCCCCH-HHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeCCcc--ccCCchh
Q psy10876 48 KHSYFIVILILTSSKNY-IRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVP--DEYSSLS 124 (319)
Q Consensus 48 ~~~~~lli~V~S~~~~~-~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~df~--Dsy~nlt 124 (319)
...-+|+|+|+|+++++ +||.+||+||++.. +. . +|+++..++. .+..+ ..++++ ..++. +++.+++
T Consensus 10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~-~~--~-~fifsd~~d~---~l~~~--~~~~~~-~~~~~~~~~~~~l~ 79 (280)
T 2j0a_A 10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRI-RQ--Q-TFIFTDSPDE---RLQER--LGPHLV-VTQCSAEHSHPALS 79 (280)
T ss_dssp CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGS-GG--G-EEEEESSCCH---HHHHH--HGGGEE-ECCC-------CCC
T ss_pred CCcccEEEEEECcHHHHHHHHHHHHHHHhccC-CC--c-eEEEcCCCcc---ccccc--ccccce-eccccccccccchH
Confidence 34567899999999865 56679999999874 21 2 2433333332 22222 245666 45553 4678899
Q ss_pred HHHHHHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEecCCCceeccCcccccc-ccccCCCCCcc
Q psy10876 125 QKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKN-WFLCDRYLPYA 203 (319)
Q Consensus 125 ~K~~~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~-~~~~~~yP~y~ 203 (319)
.|+...+++..+ -+++|++|+||||||++++|+++|...++ .+++|+|..... .|.|. +++.++ ......|+ ||
T Consensus 80 ~K~~~~~~~~l~-~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~-~~~~YiG~~~~~-~~~~~-~~~~~~~~~~~~~~~-y~ 154 (280)
T 2j0a_A 80 CKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQLLKTFPQ-DRDVYVGKPSLN-RPIHA-SELQSKQRTKLVRFW-FA 154 (280)
T ss_dssp HHHHHHHHHHHH-HTCSEEEEEETTEEECHHHHHHHHTTSCT-TSCCEEECEEC---------------------CC-EE
T ss_pred HHHHHHHHHHhC-CCCcEEEEeCCCcEEcHHHHHHHHHhCCC-CCCEEEEEeccC-ccccc-cccCccccccccccC-cc
Confidence 999988886541 28999999999999999999999999998 789999998743 23331 222221 11122343 65
Q ss_pred -cCCceeecHHHHHHHHHhcCcC-------CCCCcChHHHHHHHH-hCCCcEeecCCccccCC
Q psy10876 204 -LGGGYVLSHLLVKFISENSHML-------SSYISEDVSVGVWLS-ALDITRYHDVRFDTEFQ 257 (319)
Q Consensus 204 -~G~gYvlS~~~~~~L~~~~~~~-------~~~~~EDv~vG~~l~-~lgI~~~~~~~f~~~~~ 257 (319)
+|+|||||++++++|+...... .....||+++|+|++ ++||.++++++|+....
T Consensus 155 ~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~ 217 (280)
T 2j0a_A 155 TGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE 217 (280)
T ss_dssp CGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred cCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence 7899999999999999864332 233478999999998 99999999999997543
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=96.77 E-value=0.083 Score=50.79 Aligned_cols=193 Identities=9% Similarity=0.049 Sum_probs=104.2
Q ss_pred CCeeEEEEEECCCCC-HHHHHHHHHHHhccccCCcEEEEEEecccCchhh-HHHHHHHHhcC-CceeeCCccccCCchhH
Q psy10876 49 HSYFIVILILTSSKN-YIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVD-VKLKEEIRRYD-DILLLNQVPDEYSSLSQ 125 (319)
Q Consensus 49 ~~~~lli~V~S~~~~-~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~-~~l~~E~~~~~-DIi~~~df~Dsy~nlt~ 125 (319)
..+.+-|+|.+.-.. ...+..|+.--.+.......+++.|-..+.+... +.+++-.+.++ .|.++. ..++ .+
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~-~~~n-~G--- 101 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR-MEQR-SG--- 101 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE-CSSC-CC---
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE-CCCC-CC---
Confidence 345666777776555 3444444443333211223466666655554334 55555556666 454332 1221 22
Q ss_pred HHHHHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEec--CCC-c-------eecc-Cccccc-cc
Q psy10876 126 KVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD--GRA-R-------VRRA-GKWKEK-NW 193 (319)
Q Consensus 126 K~~~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~--~~~-~-------~~r~-~k~~~~-~~ 193 (319)
...+.....+....+|++..|+|+.+.++-|..++............|.+. ... . ..+. -.|... .+
T Consensus 102 -~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (472)
T 1xhb_A 102 -LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRW 180 (472)
T ss_dssp -HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEE
T ss_pred -hHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeec
Confidence 234445555566789999999999999988888777654312223334321 110 0 0000 011110 01
Q ss_pred cc--------------cCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEe
Q psy10876 194 FL--------------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY 247 (319)
Q Consensus 194 ~~--------------~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~ 247 (319)
.. ....-+++.|+++++++++++++-.-......+..||+-++.=+...|.+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~ 248 (472)
T 1xhb_A 181 YPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLE 248 (472)
T ss_dssp EECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEE
T ss_pred ccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEE
Confidence 00 0122356789999999999998753222233345899999988877776544
No 3
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=96.69 E-value=0.17 Score=52.54 Aligned_cols=191 Identities=8% Similarity=-0.068 Sum_probs=101.6
Q ss_pred CCCeeEEEEEECCCCCHHH-HHHHHHHHhccccCCcEEEEEEecccCchhh---------------HHHHHHHHhcCCce
Q psy10876 48 KHSYFIVILILTSSKNYIR-RKNIRDTWIKNIEKYQVKYLFSIGNKENVVD---------------VKLKEEIRRYDDIL 111 (319)
Q Consensus 48 ~~~~~lli~V~S~~~~~~~-R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~---------------~~l~~E~~~~~DIi 111 (319)
.+.+.+-|+|.+.-+..+- ++.++.--.+.-.+.+++++.+-..+.+.+. +.+++-.+.++-.+
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~ 216 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY 216 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE
Confidence 3446788888887655444 5555444333322233565555444433321 11222223343333
Q ss_pred eeCCccccCCchhHHHHHHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcC--CCCcccEEEEec-CCCcee-cc-C
Q psy10876 112 LLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKF--HYEKKLYWGFFD-GRARVR-RA-G 186 (319)
Q Consensus 112 ~~~df~Dsy~nlt~K~~~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~--~~~~~~y~G~~~-~~~~~~-r~-~ 186 (319)
+. -.+ |...|. .++....+.++.+|++.+|+|+.+.++.|.+.+.... + +-....|... .+..+. ++ +
T Consensus 217 -i~-~~~---~~~GKa-~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp-~v~~V~~~~~~~~~~~~~~~~~ 289 (802)
T 4hg6_A 217 -ST-RER---NEHAKA-GNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDP-DLFLVQTPHFFINPDPIQRNLA 289 (802)
T ss_dssp -EE-CSS---CCSHHH-HHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSS-SCCEEECCCCBSSCCHHHHHHT
T ss_pred -EE-ecC---CCCcch-HHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCC-CeEEEeccEEEeCCchHhhhhh
Confidence 21 112 222343 3566667777899999999999999998888887762 3 2233333221 111110 11 1
Q ss_pred ccc-c-c--c-ccc------cCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEee
Q psy10876 187 KWK-E-K--N-WFL------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH 248 (319)
Q Consensus 187 k~~-~-~--~-~~~------~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~~ 248 (319)
.+. . . + ++. ...-.+++.|++.++.+++++++--- ......||..++.-+.+.|.+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf---~~~~~~ED~~l~~rl~~~G~ri~~ 359 (802)
T 4hg6_A 290 LGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGF---AGETITEDAETALEIHSRGWKSLY 359 (802)
T ss_dssp CCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTC---CCSSSSHHHHHHHHHHTTTCCEEE
T ss_pred HHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCc---CCCCcchHHHHHHHHHHcCCeEEE
Confidence 110 0 0 0 010 01112356799999999999987321 122235999999988888766543
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=95.93 E-value=0.12 Score=52.50 Aligned_cols=194 Identities=12% Similarity=0.022 Sum_probs=99.0
Q ss_pred CCCeeEEEEEECCCCCHHHHHHHHHHHhccc-cCCcEEEEEEecccC-chhh-HHHHHHHHh-cCCceeeCCccccCCch
Q psy10876 48 KHSYFIVILILTSSKNYIRRKNIRDTWIKNI-EKYQVKYLFSIGNKE-NVVD-VKLKEEIRR-YDDILLLNQVPDEYSSL 123 (319)
Q Consensus 48 ~~~~~lli~V~S~~~~~~~R~aIR~TW~~~~-~~~~v~~~FvlG~~~-~~~~-~~l~~E~~~-~~DIi~~~df~Dsy~nl 123 (319)
..++.+-|+|.|--.....++.|..--.+.. .+...++ .|+...+ +... ..+.+..+. ...|.++. .+ -...
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EI-IVVDNgStD~s~~~~~~e~~~~~~~~I~vI~--~~-N~G~ 252 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAV-IVPDQGERKVRDHPDFPAAAARLGSRLSIHD--QP-NLGG 252 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEE-EEEECSSSCGGGSTTHHHHHHHHGGGEEEEE--CC-CCHH
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEE-EEEECcCCCccchHHHHHHHHhcCCCEEEEE--CC-CCCH
Confidence 4456777777776443344444443222110 1122244 4554433 3222 223332222 33444332 12 1122
Q ss_pred hHHHHHHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEE-EecCCCce----------eccC-ccc-c
Q psy10876 124 SQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWG-FFDGRARV----------RRAG-KWK-E 190 (319)
Q Consensus 124 t~K~~~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G-~~~~~~~~----------~r~~-k~~-~ 190 (319)
..-.-.+++.+....+++|++..|||+.+.++.|...+...........+| .+.....+ ...+ .|. .
T Consensus 253 a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (657)
T 4fix_A 253 SGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAA 332 (657)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccc
Confidence 222234566665444689999999999999988888776653212223344 33211110 0000 000 0
Q ss_pred c--------------------cccccCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEe
Q psy10876 191 K--------------------NWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY 247 (319)
Q Consensus 191 ~--------------------~~~~~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~ 247 (319)
+ ..+.......|++|++.++.+++++++---. --++..||+-++.=+.+.|.+..
T Consensus 333 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd--~~F~~~ED~Dl~lR~~~~G~ki~ 407 (657)
T 4fix_A 333 PHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL--PLFIKWDDADYGLRAAEHGYPTV 407 (657)
T ss_dssp TTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC--SCSSSSHHHHHHHHHHHTTCCEE
T ss_pred ccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCCh--hHhccCcHHHHHHHHHHcCCeEE
Confidence 0 0111223345889999999999999874321 12345799999988888886543
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=95.88 E-value=0.19 Score=43.45 Aligned_cols=182 Identities=8% Similarity=-0.004 Sum_probs=96.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeCCccccC------CchhHH
Q psy10876 53 IVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEY------SSLSQK 126 (319)
Q Consensus 53 lli~V~S~~~~~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~df~Dsy------~nlt~K 126 (319)
+-|+|.+.-....-+++|+.--.+. ...++++.+-..+.+.+ .++.++......|..+. .+.. .|. -
T Consensus 3 vSViIp~yn~~~~l~~~l~Sl~~q~--~~~~eiivvDd~S~d~t-~~~~~~~~~~~~i~~i~--~~~~~~~~~~~n~--G 75 (255)
T 1qg8_A 3 VSVIMTSYNKSDYVAKSISSILSQT--FSDFELFIMDDNSNEET-LNVIRPFLNDNRVRFYQ--SDISGVKERTEKT--R 75 (255)
T ss_dssp EEEEEEESSCTTTHHHHHHHHHTCS--CCCEEEEEEECSCCHHH-HHHHGGGGGSTTEEEEE--CCCCSHHHHHSSC--H
T ss_pred EEEEEEcCCCHHHHHHHHHHHHhcc--CCceEEEEEECCCCchH-HHHHHHHhhcCCEEEEe--ccccccccccccc--C
Confidence 4455555433333344444433322 23567766665554432 33444443345554332 1100 232 2
Q ss_pred HHHHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCC-CcccEEEEecC-----CCceeccCccccccccccCCCC
Q psy10876 127 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFDG-----RARVRRAGKWKEKNWFLCDRYL 200 (319)
Q Consensus 127 ~~~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~-~~~~y~G~~~~-----~~~~~r~~k~~~~~~~~~~~yP 200 (319)
.-.+.....+.++.+|++..|||.++.++.|...+...... .-.+..|.... ...+.. .+..+.........
T Consensus 76 ~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 153 (255)
T 1qg8_A 76 YAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVK--ETVRPAAQVTWNAP 153 (255)
T ss_dssp HHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEE--EEEECCCSCBSCCT
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchh--hccCchHHHHHhhc
Confidence 34566666777789999999999999998888777665321 23445554321 111111 01111100011233
Q ss_pred CcccCCceeecHHHHHHHHHhc-----CcCCCCCcChHHHHHHHHhCC
Q psy10876 201 PYALGGGYVLSHLLVKFISENS-----HMLSSYISEDVSVGVWLSALD 243 (319)
Q Consensus 201 ~y~~G~gYvlS~~~~~~L~~~~-----~~~~~~~~EDv~vG~~l~~lg 243 (319)
.+..|++.++.+++++++-... ........||..+..-+...|
T Consensus 154 ~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 154 CAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY 201 (255)
T ss_dssp TTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred CCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence 4678999999999999976211 012234689998876665554
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=95.65 E-value=0.17 Score=50.23 Aligned_cols=191 Identities=9% Similarity=-0.015 Sum_probs=101.6
Q ss_pred CeeEEEEEECCCCC-HHHHHHHHHHHhccccCCcEEEEEEecccCchh-hHHHHHHHHhcCCceeeCCccccCCchhHHH
Q psy10876 50 SYFIVILILTSSKN-YIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVV-DVKLKEEIRRYDDILLLNQVPDEYSSLSQKV 127 (319)
Q Consensus 50 ~~~lli~V~S~~~~-~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~-~~~l~~E~~~~~DIi~~~df~Dsy~nlt~K~ 127 (319)
.+.+-|+|.+.-.. ...+..|..--.+.......+++.|-..+.+.+ .+.+++..+.+..|.++. .+.-.++
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~--~~~n~G~---- 184 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILR--TKKREGL---- 184 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEE--CSSCCCH----
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEE--CCCCCCH----
Confidence 45666777766554 333343333222221122346777666666655 255555556666665432 1222233
Q ss_pred HHHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEE-Eec---CCCce--------ecc-Cccccc-cc
Q psy10876 128 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWG-FFD---GRARV--------RRA-GKWKEK-NW 193 (319)
Q Consensus 128 ~~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G-~~~---~~~~~--------~r~-~k~~~~-~~ 193 (319)
..+.....+....+|++..|+|+.+.++-|..++..... .....+| .+. ..... .+. -.|... .+
T Consensus 185 ~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~-~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (570)
T 2d7i_A 185 IRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIAR-NRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKR 263 (570)
T ss_dssp HHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHH-CTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHh-CCCEEEeeeeeccCCCchhhccccCCcccccccccccccc
Confidence 234444455567899999999999998877776665432 2223333 221 11000 000 011100 00
Q ss_pred cc-----------cCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEe
Q psy10876 194 FL-----------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY 247 (319)
Q Consensus 194 ~~-----------~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~ 247 (319)
.+ ...--+++.|+++++++++++++---.........||+-++.=+.+.|.+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~ 328 (570)
T 2d7i_A 264 IPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRME 328 (570)
T ss_dssp ECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEE
T ss_pred cccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEE
Confidence 00 0111245789999999999998743222233334799999988877876543
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=95.65 E-value=0.25 Score=42.21 Aligned_cols=187 Identities=10% Similarity=0.024 Sum_probs=95.6
Q ss_pred eEEEEEECCCCCHHHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeCCccccCCchhHHHHHHH
Q psy10876 52 FIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSF 131 (319)
Q Consensus 52 ~lli~V~S~~~~~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~df~Dsy~nlt~K~~~~l 131 (319)
.+-|+|.+.-....-+++|+.--.+. ...++++.+-..+.+.+.+.+++-.+++..|.++. .+ |.. .-.+.
T Consensus 6 ~vsViIp~yn~~~~l~~~l~Sl~~q~--~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~--~~---n~G--~~~a~ 76 (240)
T 3bcv_A 6 KVSVIVPIYNVEKYLDQCVQALLAQT--LSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH--KK---NAG--LGMAC 76 (240)
T ss_dssp SEEEEEEESSCTTTHHHHHHHHHTCS--SSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE--CC---CCC--HHHHH
T ss_pred cEEEEEecCCCHHHHHHHHHHHHhCc--CCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE--CC---CCC--hHHHH
Confidence 45555665433333344554443333 23567777766655544355555555677765442 12 221 23455
Q ss_pred HHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEec---CCCce----ecc---Ccccccc---ccccCC
Q psy10876 132 KYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRARV----RRA---GKWKEKN---WFLCDR 198 (319)
Q Consensus 132 ~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~---~~~~~----~r~---~k~~~~~---~~~~~~ 198 (319)
....+.++.+|++.+|+|.++.++.|...+.........+..|... ....+ .+. ...+... .+....
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDL 156 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGG
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHH
Confidence 5566667889999999999999888877776553212334433321 11100 000 0000000 000000
Q ss_pred C---C------C-cccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEe
Q psy10876 199 Y---L------P-YALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY 247 (319)
Q Consensus 199 y---P------~-y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~ 247 (319)
+ | . ..+|++.++.+++++++--.......+..||..++.-+...|-+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~ 215 (240)
T 3bcv_A 157 IASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVC 215 (240)
T ss_dssp TSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEE
T ss_pred hhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEE
Confidence 0 0 0 1458889999999988531111111235699999877766664443
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=95.45 E-value=0.4 Score=46.45 Aligned_cols=190 Identities=10% Similarity=0.065 Sum_probs=100.9
Q ss_pred CeeEEEEEECCCCCH-HHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeCCccccCCchhHHHH
Q psy10876 50 SYFIVILILTSSKNY-IRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL 128 (319)
Q Consensus 50 ~~~lli~V~S~~~~~-~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~df~Dsy~nlt~K~~ 128 (319)
.+.+-|+|.+.-... ..+..|..--.+.......++++|-..+.+.+. .+..+.+..|.++. .-.|.- ..
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~---~~~~~~~~~v~vi~----~~~n~G--~~ 135 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPED---GALLGKIEKVRVLR----NDRREG--LM 135 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHH---HHGGGGBTTEEEEE----CSSCCH--HH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHH---HHHHhcCCCEEEEE----CCCCcC--HH
Confidence 445666677665443 334433333222211223577776665555432 22234566655332 112322 23
Q ss_pred HHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEec---CCCce-------eccC-ccccc-ccc--
Q psy10876 129 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRARV-------RRAG-KWKEK-NWF-- 194 (319)
Q Consensus 129 ~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~---~~~~~-------~r~~-k~~~~-~~~-- 194 (319)
.+.....+....+|++.+|+|..+.++-|..++.........+..+.+. ..... .+.+ .|... .|.
T Consensus 136 ~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (501)
T 2ffu_A 136 RSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYM 215 (501)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccC
Confidence 4555566666889999999999999988888777654312233333321 00000 0000 01100 000
Q ss_pred ------------ccCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEee
Q psy10876 195 ------------LCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH 248 (319)
Q Consensus 195 ------------~~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~~ 248 (319)
......+++.|++.++++++++++-.-.........||+-++.-+...|.+...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 281 (501)
T 2ffu_A 216 TPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI 281 (501)
T ss_dssp CHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence 001123567899999999999988532222333458999998877777755443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=94.05 E-value=0.71 Score=45.83 Aligned_cols=192 Identities=10% Similarity=0.065 Sum_probs=96.7
Q ss_pred eeEEEEEECCCCCHHHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeCCccccCCchhHHHHHH
Q psy10876 51 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS 130 (319)
Q Consensus 51 ~~lli~V~S~~~~~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~df~Dsy~nlt~K~~~~ 130 (319)
+.+-|+|.+.-.....+..++.--.+. ....++++.+-..+.+.. .++.++......+..+. ... .+ .-.-.+
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~~q~-~~~~~eiivvDd~s~d~t-~~~~~~~~~~~~i~~i~--~~~-~~--~g~~~a 165 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLCNQK-TIYDYEVIVADDGSKENI-EEIVREFESLLNIKYVR--QKD-YG--YQLCAV 165 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHHTCC-CSSCEEEEEEEESCSSCH-HHHHHTTTTTSCEEEEE--ECC-CS--CCHHHH
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHhhc-cCCCeEEEEEeCCCchhH-HHHHHHhhhcCCeEEEE--eCC-CC--cchhHH
Confidence 456677777544222333443332222 223567766665554432 33333332223344331 111 11 112234
Q ss_pred HHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEec--CCCcee-----------c-------------
Q psy10876 131 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD--GRARVR-----------R------------- 184 (319)
Q Consensus 131 l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~--~~~~~~-----------r------------- 184 (319)
+....+..+.+|++..|+|..+.++.|...+...........+|... ...... +
T Consensus 166 ~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (625)
T 2z86_A 166 RNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG 245 (625)
T ss_dssp HHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred HHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence 45555566889999999999999988888776654212223334321 110000 0
Q ss_pred ------cCccccccc-----cc-cCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEeec
Q psy10876 185 ------AGKWKEKNW-----FL-CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD 249 (319)
Q Consensus 185 ------~~k~~~~~~-----~~-~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~~~ 249 (319)
...|..... .. ...-..++.|++.++++++++++---......+..||.-++.=+.+.|.+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 246 KVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSV 322 (625)
T ss_dssp ------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEEC
T ss_pred hhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEc
Confidence 000100000 00 001112478999999999999874222222233479999998888877655443
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=93.00 E-value=1.8 Score=42.78 Aligned_cols=187 Identities=8% Similarity=-0.058 Sum_probs=96.8
Q ss_pred eeEEEEEECCCCCHHHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeCCccccCCchhHHHHHH
Q psy10876 51 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS 130 (319)
Q Consensus 51 ~~lli~V~S~~~~~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~df~Dsy~nlt~K~~~~ 130 (319)
+.+-|+|.+.-....-+++|..--.+. ...++++.+-+.+.+.+.+.+++-.+.+..|.++ . + .|.. .-.+
T Consensus 375 ~~vsiii~~yn~~~~l~~~l~s~~~q~--~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~-~--~--~n~G--~~~a 445 (625)
T 2z86_A 375 PLVSIYIPAYNCSKYIVRCVESALNQT--ITDLEVCICDDGSTDDTLRILQEHYANHPRVRFI-S--Q--KNKG--IGSA 445 (625)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHHSSS--CCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEE-E--E--CCCC--HHHH
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHhCc--CCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEE-e--C--CCCC--HHHH
Confidence 456666666543333344444433332 2356777766665554434444444555566533 1 1 2221 2345
Q ss_pred HHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCC-CcccEEEEec---CCCceeccCccccccccccCCCCCcccCC
Q psy10876 131 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFD---GRARVRRAGKWKEKNWFLCDRYLPYALGG 206 (319)
Q Consensus 131 l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~-~~~~y~G~~~---~~~~~~r~~k~~~~~~~~~~~yP~y~~G~ 206 (319)
+....+.++.+|++..|+|.++.++.|...+...... .-.+..|... ........+ +..+.+........++.|+
T Consensus 446 ~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 524 (625)
T 2z86_A 446 SNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNG-YNWPIYSREKLTSAMICHH 524 (625)
T ss_dssp HHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEEC-CCCSSCCHHHHTTSCCCCS
T ss_pred HHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccC-cccccCCHHHHhhcccCCc
Confidence 5556666688999999999999999888877654210 2233333211 111111110 0001110011112346788
Q ss_pred ceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCcEeecC
Q psy10876 207 GYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV 250 (319)
Q Consensus 207 gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~~~~ 250 (319)
+.++.+++++++..-. ......||.-+..-+.+.| +....+
T Consensus 525 ~~~~~r~~~~~~ggfd--~~~~~~eD~dl~~r~~~~g-~~~~~~ 565 (625)
T 2z86_A 525 FRMFTARAWNLTEGFN--ESISNAVDYDMYLKLSEVG-PFKHIN 565 (625)
T ss_dssp CEEEEHHHHTTTTCCC--SSCSSCHHHHHHHHHTTTS-CEEEEE
T ss_pred eEEEEHHHHHHhCCCC--CccCChHHHHHHHHHHHhC-CEEEeC
Confidence 8899998876543211 1223579998877676667 544433
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=79.31 E-value=42 Score=31.47 Aligned_cols=166 Identities=13% Similarity=0.109 Sum_probs=90.9
Q ss_pred cEEEEEEecccCchhh---HHHHHHHH-hcCCceeeCCccc-c--CCchhHHHHHHHHHHHhccCeeEEEEecCCeE-Ee
Q psy10876 82 QVKYLFSIGNKENVVD---VKLKEEIR-RYDDILLLNQVPD-E--YSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTF-VR 153 (319)
Q Consensus 82 ~v~~~FvlG~~~~~~~---~~l~~E~~-~~~DIi~~~df~D-s--y~nlt~K~~~~l~w~~~~~~~~~vlk~DDD~f-Vn 153 (319)
..++++|-+.+.|.+. +++..+.. .++.-++.--... . -.....=...+++|+....+.++++.+|-|.- .+
T Consensus 28 ~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~ 107 (397)
T 2bo4_A 28 RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFG 107 (397)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCC
T ss_pred CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Confidence 3578888888877665 33333443 4454331100110 1 24556667788888875567899999999985 78
Q ss_pred hHHHHHHHhhcCCCCcccEEEEecCC---Cceecc-Ccccccccccc--CCCCCcccCCceeecHHHHHHHHHhc--CcC
Q psy10876 154 VPNIIHELENKFHYEKKLYWGFFDGR---ARVRRA-GKWKEKNWFLC--DRYLPYALGGGYVLSHLLVKFISENS--HML 225 (319)
Q Consensus 154 ~~~L~~~L~~~~~~~~~~y~G~~~~~---~~~~r~-~k~~~~~~~~~--~~yP~y~~G~gYvlS~~~~~~L~~~~--~~~ 225 (319)
++-+.++++.... .-++..|..... ....+. .+......|+. ........++.+++++++++.+.... ...
T Consensus 108 P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~ 186 (397)
T 2bo4_A 108 PDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRR 186 (397)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTC
T ss_pred HHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhccccccCCcccEEEeHHHHHHHhhhcccCcC
Confidence 8877777766543 345667753211 111000 00000001110 00112234677799999999985421 112
Q ss_pred CCCCcChHHHHHHHHhCCCcEeec
Q psy10876 226 SSYISEDVSVGVWLSALDITRYHD 249 (319)
Q Consensus 226 ~~~~~EDv~vG~~l~~lgI~~~~~ 249 (319)
..+ ..|+.+...+.+.|.+..+.
T Consensus 187 ~~f-g~eiel~~~a~~~G~rI~EV 209 (397)
T 2bo4_A 187 SDW-GIDTLYTFVTVQQGVSIYEC 209 (397)
T ss_dssp CST-THHHHHHHHHHHTTCCEEEE
T ss_pred CCc-chHHHHHHHHHHcCCEEEEE
Confidence 223 34888877777777655443
No 12
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=74.34 E-value=26 Score=29.87 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=62.2
Q ss_pred ccCeeEEEEecCC---eEEehHHHHHHHhhcCCCCcccEEEEecCCCceeccCccccccccccCC---CCCcccCCceee
Q psy10876 137 HFDFQYLLKCDDD---TFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDR---YLPYALGGGYVL 210 (319)
Q Consensus 137 ~~~~~~vlk~DDD---~fVn~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~---yP~y~~G~gYvl 210 (319)
.-++++++.+|-| +-.+++.+.++|+. ..++.+|........ .-+. ..+.|..+. =-.||++|..++
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~~----g~DVV~GsYp~K~~~-~~s~--~a~~y~~~i~~~~V~d~~tGF~lI 123 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFNE----GYDVVCGYYYLKTLR-GYSV--YRKDWEKEIFDGEVNGCGLGFTFI 123 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHHHH----TCSEEEEECBCTTSS-SBSE--ESSSBCSSCCCEECSEECSSEEEE
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHHhC----CCCEEEEEeeccCCC-ccch--HHHHHHHhccCceeeeccccEEEE
Confidence 4478999999999 99999999999955 346888874322211 0000 001111111 123788899999
Q ss_pred cHHHHHHHHHhcC------cCCCCCcChHHHHHHHHhCC
Q psy10876 211 SHLLVKFISENSH------MLSSYISEDVSVGVWLSALD 243 (319)
Q Consensus 211 S~~~~~~L~~~~~------~~~~~~~EDv~vG~~l~~lg 243 (319)
+|+++++|.+..- ..+..-.||+++-.-++..+
T Consensus 124 kR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~ 162 (203)
T 2c0n_A 124 KREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRT 162 (203)
T ss_dssp EHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCE
T ss_pred hHHHHHHHhhhhhhcCChhhhccccCCceEEEecccccc
Confidence 9999999865522 12233459998877666544
No 13
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=68.02 E-value=32 Score=30.79 Aligned_cols=185 Identities=8% Similarity=-0.020 Sum_probs=88.1
Q ss_pred CCeeEEEEEECCCCCHHHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCceeeC-Ccc-ccCCchhHH
Q psy10876 49 HSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLN-QVP-DEYSSLSQK 126 (319)
Q Consensus 49 ~~~~lli~V~S~~~~~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi~~~-df~-Dsy~nlt~K 126 (319)
..+.+-|+|.+.-....-+++|..--.+. .....+++.+-+.+.+.+.+.+ ++ ++.-+... ... ..-.|.- |
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~-~~~~~eiivVDdgS~D~t~~~~-~~---~~~~~~~~~~~~~~~~~n~G-~ 119 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLV-DGLVDELIVLDSGSTDDTEIRA-VA---AGARVVSREQALPEVPIRPG-K 119 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGB-TTTBSEEEEEECSCCSSHHHHH-HH---TTCEEEEHHHHCTTSCCCCS-H
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhh-CCCCcEEEEEeCCCCchHHHHH-HH---hhhhhccceeeeccCCCCCC-H
Confidence 34556666666544333344444433222 1223577666655554432222 22 33221000 000 1112221 2
Q ss_pred HHHHHHHHHhccCeeEEEEecCCeE-EehHHHHHHHhhc-CCCCcccEEEEecCCC---c------eeccCcc---cccc
Q psy10876 127 VLHSFKYIYEHFDFQYLLKCDDDTF-VRVPNIIHELENK-FHYEKKLYWGFFDGRA---R------VRRAGKW---KEKN 192 (319)
Q Consensus 127 ~~~~l~w~~~~~~~~~vlk~DDD~f-Vn~~~L~~~L~~~-~~~~~~~y~G~~~~~~---~------~~r~~k~---~~~~ 192 (319)
-.++....+.++.+|++.+|+|.. +.++.|...+... ....-.+..|...... . ....++. ....
T Consensus 120 -~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
T 3ckj_A 120 -GEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARP 198 (329)
T ss_dssp -HHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHH
T ss_pred -HHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHH
Confidence 234444555667899999999999 8888888877663 2113456667643211 0 0001110 0000
Q ss_pred ----ccccCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHH-HHHHhCCCc
Q psy10876 193 ----WFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVG-VWLSALDIT 245 (319)
Q Consensus 193 ----~~~~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG-~~l~~lgI~ 245 (319)
.+..-.-..++.|+.+++++++++.+- .+.-..||..+. .++...|+.
T Consensus 199 ~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-----f~~~~~~D~~l~~r~~~~~g~~ 251 (329)
T 3ckj_A 199 LLAALRPELGCILQPLGGEYAATRELLTSVP-----FAPGYGVEIGLLVDTFDRLGLD 251 (329)
T ss_dssp HHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-----BCCGGGHHHHHHHHHHHHHCGG
T ss_pred HHHHhhhhhccccCCCccceeeeHHHHHhCC-----CCCCCcccHHHHHHHHHhcCCc
Confidence 011101123456788899999998872 122224777664 344445643
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=54.78 E-value=35 Score=31.73 Aligned_cols=113 Identities=16% Similarity=0.101 Sum_probs=61.4
Q ss_pred HHHHHHHhccCeeEEEEecCCeE-EehHHHHHHHhhcCCC-CcccEEEEecCCC----ceec--cC---ccccc---c-c
Q psy10876 129 HSFKYIYEHFDFQYLLKCDDDTF-VRVPNIIHELENKFHY-EKKLYWGFFDGRA----RVRR--AG---KWKEK---N-W 193 (319)
Q Consensus 129 ~~l~w~~~~~~~~~vlk~DDD~f-Vn~~~L~~~L~~~~~~-~~~~y~G~~~~~~----~~~r--~~---k~~~~---~-~ 193 (319)
.++....+..+.+|++.+|.|.. +.++.|..++...... .-.+..|...... ...+ .+ .|... . .
T Consensus 169 ~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~ 248 (387)
T 3f1y_A 169 DAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLF 248 (387)
T ss_dssp HHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHH
Confidence 34445555568899999999999 8888877777654210 3456777643211 0000 01 11000 0 0
Q ss_pred cccCCCCCcccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCCCc
Q psy10876 194 FLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDIT 245 (319)
Q Consensus 194 ~~~~~yP~y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~ 245 (319)
++.-.-...+.|+.+++++++++.+ . ...-+..|.-.+...+.+.|+.
T Consensus 249 ~~~l~~~~d~~sG~~a~rR~~l~~i-~---f~~gyg~e~ell~~~~~~~G~~ 296 (387)
T 3f1y_A 249 YPELAGFVQPLAGEFVADRELFCSI-P---FLTGYAVETGIMIDVLKKVGLG 296 (387)
T ss_dssp CGGGTTCSCTTCSCEEEEHHHHTTS-C---EECSTTHHHHHHHHHHHHHCGG
T ss_pred hHhhccccccccccEEEEHHHHHhC-C---CCCCcchHHHHHHHHHHhcCCC
Confidence 1100011234688899999999887 1 1233444444445565666665
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=39.74 E-value=54 Score=29.08 Aligned_cols=93 Identities=16% Similarity=0.100 Sum_probs=51.2
Q ss_pred hccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEecCCCceeccCccccccccccCCCCCcccCCceeecHHHH
Q psy10876 136 EHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLV 215 (319)
Q Consensus 136 ~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yP~y~~G~gYvlS~~~~ 215 (319)
+..+.+|++.+|+|+.+..+.+.. .... .... ++. ... ++ .+ ...| ....|+..++.+++.
T Consensus 126 ~~A~gd~i~flD~D~i~~~d~~~~---~~~~-~p~~-~~~------~~~--~~----~~-~~~~-~~~~G~~~~~rr~~f 186 (287)
T 2fy7_A 126 KDYDYTCFVFSDVDLIPMNDHNAY---RCFS-QPRH-ISV------AMD--KF----GF-SLPY-VQYFGGVSALSKQQF 186 (287)
T ss_dssp HHSCCCEEEEECTTEEESBTTSCC---SCCS-SCEE-CCC------EEG--GG----TT-SCSS-TTCCCSEEEEEHHHH
T ss_pred HhCCCCEEEEECCCcccCCCcceE---ecCC-CCce-EEE------eec--cc----cc-CCCc-CceeeeEEEEEHHHH
Confidence 556889999999999998874210 0000 0000 000 000 00 01 0111 235688899999998
Q ss_pred HHHHHhcCcCCCCCcChHHHHHHHHhCCCcEe
Q psy10876 216 KFISENSHMLSSYISEDVSVGVWLSALDITRY 247 (319)
Q Consensus 216 ~~L~~~~~~~~~~~~EDv~vG~~l~~lgI~~~ 247 (319)
.++---.........||+-++.=+.+.|.+..
T Consensus 187 ~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~ 218 (287)
T 2fy7_A 187 LTINGFPNNYWGWGGEDDDIFNRLVFRGMSIS 218 (287)
T ss_dssp HHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCB
T ss_pred HHcCCCCccccccccchHHHHHHHHHcCCeEE
Confidence 88632111222234699999877777775544
No 16
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=39.55 E-value=6.2 Score=39.98 Aligned_cols=112 Identities=12% Similarity=-0.031 Sum_probs=0.0
Q ss_pred HHHHHHHhccCeeEEEEecCCeEEehHHHHHHHhhcCCCCcccEEEEecCCC---ceeccCccccccccccCCC----CC
Q psy10876 129 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRA---RVRRAGKWKEKNWFLCDRY----LP 201 (319)
Q Consensus 129 ~~l~w~~~~~~~~~vlk~DDD~fVn~~~L~~~L~~~~~~~~~~y~G~~~~~~---~~~r~~k~~~~~~~~~~~y----P~ 201 (319)
.+.....+.++.+|++.+|+|.++.++.|...+..... .++.+|...... ............++....+ -.
T Consensus 73 ~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~--~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (729)
T 3l7i_A 73 HARNIALEEVETPYFMFLDADDELASYAITFYLEKFNN--TDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLR 150 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhcC--CCEEEEeeEEeecCCCccccccceeeeeecchhhHHHHhh
Confidence 34444455557899999999999998888887776652 344444321110 0000000000011111111 11
Q ss_pred cccCCceeecHHHHHHHHHhcCcCCCCCcChHHHHHHHHhCC
Q psy10876 202 YALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALD 243 (319)
Q Consensus 202 y~~G~gYvlS~~~~~~L~~~~~~~~~~~~EDv~vG~~l~~lg 243 (319)
.+.|++.++.+++++++--... -.....||..+..-+...|
T Consensus 151 ~~~~~~~~~rr~~l~~~gl~fd-e~~~~~ED~d~~~rl~~~g 191 (729)
T 3l7i_A 151 KQSACNIIFRTAIVRAHHIRFN-ENLNTYVDWSFVLEYMKYV 191 (729)
T ss_dssp ------------------------------------------
T ss_pred ccchhheeeeHHHHHHcCCCcC-CCCCcccCHHHHHHHHHhc
Confidence 3467788899988887531110 0112579988765444433
No 17
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=23.41 E-value=11 Score=23.98 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=26.6
Q ss_pred cCCCCccccccCCCCeeEEEEEECCCCC---HHHHHH
Q psy10876 36 ANQTGLSKFKNLKHSYFIVILILTSSKN---YIRRKN 69 (319)
Q Consensus 36 ~~~~~~~~~~~~~~~~~lli~V~S~~~~---~~~R~a 69 (319)
.++.++++.+|..++--+++-|.|.|-- +++|+.
T Consensus 4 ~~qlSLm~vkCeTPnCpF~mSVnTQP~CHEC~errq~ 40 (49)
T 2eqg_A 4 GSSGSLMDVKCETPNCPFFMSVNTQPLCHECSERRQK 40 (49)
T ss_dssp CCSSCCCSSBCSSTTCCSBCCTTTTTSCHHHHHHHHT
T ss_pred cccceeEEEeecCCCCCeEEEecCccchHHHHHHHhh
Confidence 4566789999999998888999999864 556653
No 18
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.55 E-value=1.1e+02 Score=23.35 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=30.3
Q ss_pred EECCCCCHHHHHHHHHHHhccccCCcEEEEEEecccCchhhHHHHHHHHhcCCce
Q psy10876 57 ILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDIL 111 (319)
Q Consensus 57 V~S~~~~~~~R~aIR~TW~~~~~~~~v~~~FvlG~~~~~~~~~l~~E~~~~~DIi 111 (319)
|.|-...-+-|..||+.|.+. ... .++.++............+|++.-|--+
T Consensus 55 vrtvedkedfrenireiwery-pql--dvvvivttddkewikdfieeakergvev 106 (162)
T 2l82_A 55 VRTVEDKEDFRENIREIWERY-PQL--DVVVIVTTDDKEWIKDFIEEAKERGVEV 106 (162)
T ss_dssp EEECCSHHHHHHHHHHHHHHC-TTC--CEEEEEECCCHHHHHHHHHHHHHTTCEE
T ss_pred eeeeccHHHHHHHHHHHHHhC-CCC--cEEEEEecCcHHHHHHHHHHHHhcCcEE
Confidence 344455566688899999987 333 3444444322222266667777777644
Done!