BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10878
(131 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242013254|ref|XP_002427327.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511676|gb|EEB14589.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 61/64 (95%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
PEKLFKVI+IGDPTVGKTSFVQRYV+NT+K+DYKGTVGVDFALKI+KW D Q IKLQLWD
Sbjct: 15 PEKLFKVIIIGDPTVGKTSFVQRYVENTYKRDYKGTVGVDFALKILKWSDTQTIKLQLWD 74
Query: 127 IAGQ 130
IAGQ
Sbjct: 75 IAGQ 78
>gi|321478953|gb|EFX89909.1| hypothetical protein DAPPUDRAFT_39774 [Daphnia pulex]
Length = 175
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 58/68 (85%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
+N EKLFKVI+IGDP VGKTSF++RYVQN F+ DYK T+GVDFALKIV+W + Q IKL
Sbjct: 8 YNRATEKLFKVIIIGDPGVGKTSFIRRYVQNAFRGDYKATIGVDFALKIVRWSENQTIKL 67
Query: 123 QLWDIAGQ 130
QLWDIAGQ
Sbjct: 68 QLWDIAGQ 75
>gi|405965375|gb|EKC30753.1| WD repeat-containing protein 82 [Crassostrea gigas]
Length = 517
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/63 (76%), Positives = 56/63 (88%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKVI+IGDPTVGKTSFVQRYV + +++DYK T+GVDFALK+VKW + Q IKLQLWDI
Sbjct: 308 EILFKVIIIGDPTVGKTSFVQRYVNDAYRRDYKMTIGVDFALKVVKWSESQTIKLQLWDI 367
Query: 128 AGQ 130
AGQ
Sbjct: 368 AGQ 370
>gi|328716362|ref|XP_003245910.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2
[Acyrthosiphon pisum]
Length = 260
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 58/64 (90%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
PEKLFKVI+IGDPTVGKT+FV+RYVQ +F ++YKGTVGVDFALKI+K + + IKLQLWD
Sbjct: 61 PEKLFKVIIIGDPTVGKTAFVKRYVQKSFSREYKGTVGVDFALKIIKVSETETIKLQLWD 120
Query: 127 IAGQ 130
IAGQ
Sbjct: 121 IAGQ 124
>gi|193631807|ref|XP_001951808.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Acyrthosiphon pisum]
Length = 201
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 58/64 (90%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
PEKLFKVI+IGDPTVGKT+FV+RYVQ +F ++YKGTVGVDFALKI+K + + IKLQLWD
Sbjct: 2 PEKLFKVIIIGDPTVGKTAFVKRYVQKSFSREYKGTVGVDFALKIIKVSETETIKLQLWD 61
Query: 127 IAGQ 130
IAGQ
Sbjct: 62 IAGQ 65
>gi|148233848|ref|NP_001085684.1| MGC80435 protein [Xenopus laevis]
gi|49118197|gb|AAH73193.1| MGC80435 protein [Xenopus laevis]
Length = 204
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 53/63 (84%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD TVGKTS +QRYV + F KDYK T+GVDFALK+V+W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFALKVVQWSDAETVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|166157852|ref|NP_001107338.1| uncharacterized protein LOC100135159 [Xenopus (Silurana)
tropicalis]
gi|163916398|gb|AAI57147.1| LOC100135159 protein [Xenopus (Silurana) tropicalis]
Length = 204
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 53/63 (84%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD TVGKTS +QRYV + F KDYK T+GVDFALK+V+W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFALKVVQWSDTETVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|444706397|gb|ELW47739.1| Ras-related protein Rab-7L1 [Tupaia chinensis]
Length = 204
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ + LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQL
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQL 61
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 62 WDIAGQ 67
>gi|440893578|gb|ELR46289.1| Ras-related protein Rab-7L1, partial [Bos grunniens mutus]
Length = 209
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 11 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 70
Query: 128 AGQ 130
AGQ
Sbjct: 71 AGQ 73
>gi|351710940|gb|EHB13859.1| Ras-related protein Rab-7L1 [Heterocephalus glaber]
Length = 204
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|403294870|ref|XP_003938385.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 203
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYCQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|149944729|ref|NP_001092564.1| ras-related protein Rab-7L1 [Bos taurus]
gi|426239399|ref|XP_004013609.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Ovis aries]
gi|148745251|gb|AAI42253.1| RAB7L1 protein [Bos taurus]
gi|296479392|tpg|DAA21507.1| TPA: RAB7, member RAS oncogene family-like 1 [Bos taurus]
Length = 203
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ + LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQL
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQL 61
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 62 WDIAGQ 67
>gi|395838749|ref|XP_003792270.1| PREDICTED: ras-related protein Rab-7L1 [Otolemur garnettii]
Length = 204
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ + LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQL
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQL 61
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 62 WDIAGQ 67
>gi|344277036|ref|XP_003410311.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Loxodonta
africana]
Length = 204
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|431892885|gb|ELK03313.1| Ras-related protein Rab-7L1 [Pteropus alecto]
Length = 203
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ + LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQL
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQL 61
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 62 WDIAGQ 67
>gi|327278637|ref|XP_003224067.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Anolis
carolinensis]
Length = 202
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FKV++IGD TVGKTS VQRY ++F K YK TVGVDFALK+V+W D + ++LQLWDIAG
Sbjct: 1 MFKVLIIGDATVGKTSLVQRYANDSFNKHYKSTVGVDFALKVVQWSDSETVRLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|260809841|ref|XP_002599713.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
gi|229284994|gb|EEN55725.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
Length = 168
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 55/64 (85%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E+LFK+++IGD TVGKTSFVQRYV ++FK++YK TVGVDFALK+++ ++ ++ QLWD
Sbjct: 2 TERLFKILIIGDATVGKTSFVQRYVNDSFKREYKATVGVDFALKVIQISEEDTVRFQLWD 61
Query: 127 IAGQ 130
+AGQ
Sbjct: 62 VAGQ 65
>gi|395531196|ref|XP_003767668.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Sarcophilus
harrisii]
Length = 204
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+V+W D + ++LQLWDIAG
Sbjct: 7 LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVVQWSDSEMVRLQLWDIAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|354478103|ref|XP_003501255.1| PREDICTED: ras-related protein Rab-7L1-like [Cricetulus griseus]
Length = 204
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|301786128|ref|XP_002928478.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Ailuropoda
melanoleuca]
gi|281339455|gb|EFB15039.1| hypothetical protein PANDA_018438 [Ailuropoda melanoleuca]
Length = 203
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|51316505|sp|Q91YQ1.1|RAB7L_MOUSE RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|16359355|gb|AAH16133.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|20809768|gb|AAH29056.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|112293019|dbj|BAF02887.1| Rab29 [Mus musculus]
gi|148707749|gb|EDL39696.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Mus
musculus]
Length = 204
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|229608951|ref|NP_659124.2| ras-related protein Rab-7L1 [Mus musculus]
Length = 204
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|291402521|ref|XP_002717602.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 1
[Oryctolagus cuniculus]
Length = 204
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|149707806|ref|XP_001490786.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Equus
caballus]
Length = 203
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|355714977|gb|AES05183.1| RAB7, member RAS oncoprotein family-like 1 [Mustela putorius furo]
Length = 202
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|19424290|ref|NP_598274.1| ras-related protein Rab-7L1 [Rattus norvegicus]
gi|81910561|sp|Q63481.1|RAB7L_RAT RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1; AltName: Full=Ras-related protein Rab-29
gi|1235593|emb|CAA65444.1| GTPase [Rattus norvegicus]
gi|149058655|gb|EDM09812.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
gi|149058656|gb|EDM09813.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 204
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|432116090|gb|ELK37217.1| Ras-related protein Rab-7L1 [Myotis davidii]
Length = 203
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|335295264|ref|XP_003357447.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus scrofa]
gi|335295266|ref|XP_003357448.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus scrofa]
gi|335295268|ref|XP_003357449.1| PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus scrofa]
Length = 203
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ + LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQL
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQL 61
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 62 WDIAGQ 67
>gi|417397029|gb|JAA45548.1| Putative gtp-binding protein-like ras superfamily [Desmodus
rotundus]
Length = 203
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|126306731|ref|XP_001365593.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Monodelphis
domestica]
Length = 204
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 51/61 (83%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+V+GD VGKTS VQRY Q++F + YK TVGVDFALK+++W D + ++LQLWDIAG
Sbjct: 7 LFKVLVVGDAAVGKTSLVQRYCQDSFSRHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|51859426|gb|AAH81732.1| Rab7l1 protein [Rattus norvegicus]
Length = 167
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|386781459|ref|NP_001247882.1| ras-related protein Rab-7L1 [Macaca mulatta]
gi|402857442|ref|XP_003893264.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|402857444|ref|XP_003893265.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|355558842|gb|EHH15622.1| hypothetical protein EGK_01737 [Macaca mulatta]
gi|355745985|gb|EHH50610.1| hypothetical protein EGM_01467 [Macaca fascicularis]
gi|380786041|gb|AFE64896.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
gi|383411345|gb|AFH28886.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
Length = 203
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|296230574|ref|XP_002760764.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Callithrix
jacchus]
Length = 203
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|410986335|ref|XP_003999466.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Felis catus]
Length = 203
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFNKHYKSTVGVDFALKVLQWSDSEVVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|348578125|ref|XP_003474834.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Cavia
porcellus]
Length = 204
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ LFKV+V+GD VGKTS V+RY Q+ F K YK TVGVDFALK+++W D + ++LQL
Sbjct: 2 GSHDHLFKVLVVGDAAVGKTSLVRRYSQDCFSKHYKSTVGVDFALKVIQWSDSEMVRLQL 61
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 62 WDIAGQ 67
>gi|443693582|gb|ELT94920.1| hypothetical protein CAPTEDRAFT_101663 [Capitella teleta]
Length = 174
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 50/63 (79%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
++ FK++ IGDP VGKTS VQRYV + KDYK T+GVDFALK+VKW D IKLQLWDI
Sbjct: 2 DRTFKLLTIGDPGVGKTSLVQRYVHGYYTKDYKATLGVDFALKLVKWSDNVTIKLQLWDI 61
Query: 128 AGQ 130
AGQ
Sbjct: 62 AGQ 64
>gi|449280941|gb|EMC88156.1| Ras-related protein Rab-7L1, partial [Columba livia]
Length = 169
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 53/63 (84%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+++FKV+V+GD TVGKTS VQRY ++F + YK TVGVDFALK+V+W + + ++LQLWDI
Sbjct: 5 DRMFKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|118102410|ref|XP_417967.2| PREDICTED: ras-related protein Rab-7L1 [Gallus gallus]
Length = 205
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 53/63 (84%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+++FKV+V+GD TVGKTS VQRY ++F + YK TVGVDFALK+V+W + + ++LQLWDI
Sbjct: 5 DRMFKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|74005894|ref|XP_536104.2| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Canis lupus
familiaris]
Length = 203
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F++ YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|149058657|gb|EDM09814.1| RAB7, member RAS oncogene family-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|4506375|ref|NP_003920.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|197101399|ref|NP_001126387.1| ras-related protein Rab-7L1 [Pongo abelii]
gi|208609962|ref|NP_001129134.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|114572136|ref|XP_001162514.1| PREDICTED: uncharacterized protein LOC469654 isoform 4 [Pan
troglodytes]
gi|332248154|ref|XP_003273227.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Nomascus
leucogenys]
gi|332248156|ref|XP_003273228.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Nomascus
leucogenys]
gi|332811507|ref|XP_001162387.2| PREDICTED: uncharacterized protein LOC469654 isoform 1 [Pan
troglodytes]
gi|397504834|ref|XP_003822985.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|397504836|ref|XP_003822986.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|13633364|sp|O14966.1|RAB7L_HUMAN RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|75054849|sp|Q5R7A4.1|RAB7L_PONAB RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|2388544|dbj|BAA22160.1| small GTP-binding protein [Homo sapiens]
gi|12803517|gb|AAH02585.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|49456973|emb|CAG46807.1| RAB7L1 [Homo sapiens]
gi|54695950|gb|AAV38347.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|55731284|emb|CAH92356.1| hypothetical protein [Pongo abelii]
gi|61357258|gb|AAX41360.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
gi|119611986|gb|EAW91580.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|119611987|gb|EAW91581.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|123982028|gb|ABM82843.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|124000657|gb|ABM87837.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|157928318|gb|ABW03455.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|261859934|dbj|BAI46489.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|410211350|gb|JAA02894.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211352|gb|JAA02895.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211354|gb|JAA02896.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211356|gb|JAA02897.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211358|gb|JAA02898.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211360|gb|JAA02899.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211362|gb|JAA02900.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256832|gb|JAA16383.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256834|gb|JAA16384.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256836|gb|JAA16385.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256838|gb|JAA16386.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287094|gb|JAA22147.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287096|gb|JAA22148.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287098|gb|JAA22149.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287100|gb|JAA22150.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287102|gb|JAA22151.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329207|gb|JAA33550.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329209|gb|JAA33551.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329211|gb|JAA33552.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
Length = 203
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|60834171|gb|AAX37082.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|55731507|emb|CAH92465.1| hypothetical protein [Pongo abelii]
Length = 203
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|189066586|dbj|BAG35836.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F + YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSRHYKSTVGVDFALKVLQWSDYEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|62898760|dbj|BAD97234.1| RAB7, member RAS oncogene family-like 1 variant [Homo sapiens]
Length = 203
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVGVDFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSPVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|54696028|gb|AAV38386.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|61367282|gb|AAX42976.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFKV+V+GD VGKTS VQRY Q++F K YK TVG DFALK+++W D + ++LQLWDI
Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGDFALKVLQWSDYEIVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|348517128|ref|XP_003446087.1| PREDICTED: ras-related protein Rab-7L1-like [Oreochromis niloticus]
Length = 207
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 51/63 (80%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L K++++GD VGK+SFV RYV F K YK TVGVDF++K+++W D++K++LQLWDI
Sbjct: 3 EHLLKILIVGDGNVGKSSFVHRYVSGQFNKTYKMTVGVDFSVKLLRWSDKEKVRLQLWDI 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 50/63 (79%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+++GD TVGKTSFVQRYV +++YK T+GVDFALK++ W ++LQLWDI
Sbjct: 3 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVRLQLWDI 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|17933630|ref|NP_525109.1| lightoid, isoform B [Drosophila melanogaster]
gi|7303926|gb|AAF58970.1| lightoid, isoform B [Drosophila melanogaster]
Length = 686
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Query: 13 SASEDPSIDNWDKASWENVTPIVSEQGDGEIIEIIDPSLKLVRVPSIRKSFNAPPEKLFK 72
S SED S + D EN P+ + D ++ P+I S + E L+K
Sbjct: 435 SGSEDDSEEQADTTEPENAKPMPA---------FGDLTMDQEMEPAIMTSTSDKREHLYK 485
Query: 73 VIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W ++LQLWDIAGQ
Sbjct: 486 ILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQ 543
>gi|432959688|ref|XP_004086364.1| PREDICTED: ras-related protein Rab-7L1-like [Oryzias latipes]
Length = 204
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 50/63 (79%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L K++++GD VGK+SFV RY+ F + YK TVGVDFA+K++ W D++K++LQLWDI
Sbjct: 3 EHLLKILIVGDGNVGKSSFVNRYISGNFNRTYKMTVGVDFAVKLLHWSDEEKVRLQLWDI 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|348508308|ref|XP_003441696.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 212
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N E L+K++VIGD VGKTS ++RYV + F +Y+ T+GVDFALK++ W DQ+ ++LQ
Sbjct: 4 NHHKEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNW-DQETVRLQ 62
Query: 124 LWDIAGQ 130
LWDIAGQ
Sbjct: 63 LWDIAGQ 69
>gi|410909794|ref|XP_003968375.1| PREDICTED: ras-related protein Rab-38-like [Takifugu rubripes]
Length = 212
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N E L+K++VIGD VGKTS ++RYV + F +Y+ T+GVDFALK++ W DQ+ ++LQ
Sbjct: 4 NHQKEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNW-DQETVRLQ 62
Query: 124 LWDIAGQ 130
LWDIAGQ
Sbjct: 63 LWDIAGQ 69
>gi|189534008|ref|XP_690992.3| PREDICTED: ras-related protein Rab-38-like [Danio rerio]
Length = 213
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIGD VGKTS ++RYV F + Y+ T+GVDFALK++ W Q ++LQLWDI
Sbjct: 4 EHLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHWDSQTVVRLQLWDI 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|432892465|ref|XP_004075794.1| PREDICTED: ras-related protein Rab-38-like [Oryzias latipes]
Length = 212
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N E+L+K++VIGD VGKTS ++RYV + F +Y+ T+GVDFALK++ W +Q+ ++LQ
Sbjct: 4 NHHKERLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNW-EQETVRLQ 62
Query: 124 LWDIAGQ 130
LWDIAGQ
Sbjct: 63 LWDIAGQ 69
>gi|348518836|ref|XP_003446937.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 208
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ S+RK E L+KV+VIGD VGKTS ++RYV +T+ +Y+ T+GVDFALK++ W
Sbjct: 1 MQSLRK------EHLYKVLVIGDLGVGKTSIIRRYVHHTYSTNYRATIGVDFALKVLNW- 53
Query: 116 DQQKIKLQLWDIAGQ 130
D + ++LQLWDIAGQ
Sbjct: 54 DSETVRLQLWDIAGQ 68
>gi|195154130|ref|XP_002017975.1| GL17459 [Drosophila persimilis]
gi|194113771|gb|EDW35814.1| GL17459 [Drosophila persimilis]
Length = 931
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 714 PAIMTSTSEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDG 773
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 774 NTIVRLQLWDIAGQ 787
>gi|198460156|ref|XP_001361630.2| GA20772 [Drosophila pseudoobscura pseudoobscura]
gi|198136921|gb|EAL26209.2| GA20772 [Drosophila pseudoobscura pseudoobscura]
Length = 936
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 719 PAIMTSTSEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDG 778
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 779 NTIVRLQLWDIAGQ 792
>gi|189522743|ref|XP_001340450.2| PREDICTED: ras-related protein Rab-32 [Danio rerio]
Length = 208
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
E LFKV+VIGD VGK+SFV+RYV+N F ++ K ++GVDF++K++ W +++LQL
Sbjct: 8 GCTEHLFKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAHTRVRLQL 67
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 68 WDIAGQ 73
>gi|301610828|ref|XP_002934952.1| PREDICTED: ras-related protein Rab-32-like [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L KV+V+GD VGKTS +QRYV N F + Y+ T+GVDFALKIV W ++LQLWDI
Sbjct: 7 EILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLNTMVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|296199411|ref|XP_002747112.1| PREDICTED: ras-related protein Rab-32 [Callithrix jacchus]
Length = 225
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 54 VRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVK 113
R P IR E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++
Sbjct: 16 ARAPEIR-------EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 68
Query: 114 WRDQQKIKLQLWDIAGQ 130
W + ++LQLWDIAGQ
Sbjct: 69 WDSRTLVRLQLWDIAGQ 85
>gi|326671255|ref|XP_003199402.1| PREDICTED: ras-related protein Rab-38-like [Danio rerio]
Length = 210
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N E L+K++VIGD VGKTS ++RYV T+ +Y+ T+GVDFALK++ W D + ++LQ
Sbjct: 3 NNQKEHLYKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLNW-DSETVRLQ 61
Query: 124 LWDIAGQ 130
LWDIAGQ
Sbjct: 62 LWDIAGQ 68
>gi|410915796|ref|XP_003971373.1| PREDICTED: ras-related protein Rab-38-like [Takifugu rubripes]
Length = 208
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIGD VGKTS ++RYV T+ +Y+ T+GVDFALK++ W D + ++LQLWDI
Sbjct: 7 EHLYKVLVIGDLGVGKTSIIRRYVHQTYSNNYRATIGVDFALKVLNW-DSETVRLQLWDI 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|6561893|dbj|BAA88238.1| Rab-related protein 1 [Drosophila melanogaster]
Length = 231
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 15 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 74
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 75 NTIVRLQLWDIAGQ 88
>gi|432896027|ref|XP_004076264.1| PREDICTED: ras-related protein Rab-38-like [Oryzias latipes]
Length = 218
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIGD VGKTS ++RYV T+ +Y+ T+GVDFALK++ W D + ++LQLWDI
Sbjct: 17 EHLYKVLVIGDLGVGKTSIIRRYVHQTYSTNYRATIGVDFALKVLNW-DSETVRLQLWDI 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|195456043|ref|XP_002074978.1| GK22864 [Drosophila willistoni]
gi|194171063|gb|EDW85964.1| GK22864 [Drosophila willistoni]
Length = 685
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 55/80 (68%)
Query: 51 LKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALK 110
L + P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK
Sbjct: 462 LTMEMEPAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALK 521
Query: 111 IVKWRDQQKIKLQLWDIAGQ 130
++ W ++LQLWDIAGQ
Sbjct: 522 VLHWDANTIVRLQLWDIAGQ 541
>gi|45551040|ref|NP_724768.2| lightoid, isoform A [Drosophila melanogaster]
gi|45445639|gb|AAG22295.2| lightoid, isoform A [Drosophila melanogaster]
Length = 385
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 169 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 228
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 229 NTIVRLQLWDIAGQ 242
>gi|195581818|ref|XP_002080727.1| GD10095 [Drosophila simulans]
gi|194192736|gb|EDX06312.1| GD10095 [Drosophila simulans]
Length = 382
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 166 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 225
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 226 NTIVRLQLWDIAGQ 239
>gi|348519068|ref|XP_003447053.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 207
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIGD VGKTS ++RYV F + Y+ T+GVDFALK+++W I+LQLWDI
Sbjct: 4 ELLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLQWDSNTVIRLQLWDI 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|195332749|ref|XP_002033056.1| GM20620 [Drosophila sechellia]
gi|194125026|gb|EDW47069.1| GM20620 [Drosophila sechellia]
Length = 382
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 166 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 225
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 226 NTIVRLQLWDIAGQ 239
>gi|148237858|ref|NP_001091380.1| uncharacterized protein LOC100037231 [Xenopus laevis]
gi|125858912|gb|AAI29780.1| LOC100037231 protein [Xenopus laevis]
Length = 209
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L KV+V+GD VGKTS +QRYV N F + Y+ T+GVDFALKIV W ++LQLWDI
Sbjct: 7 EILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLDTVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|355752522|gb|EHH56642.1| hypothetical protein EGM_06097 [Macaca fascicularis]
Length = 244
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R F E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W +
Sbjct: 32 RYMFRLGKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETV 91
Query: 120 IKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 92 VRLQLWDIAGQ 102
>gi|194863234|ref|XP_001970342.1| GG10573 [Drosophila erecta]
gi|190662209|gb|EDV59401.1| GG10573 [Drosophila erecta]
Length = 414
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 198 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 257
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 258 NTIVRLQLWDIAGQ 271
>gi|24652024|ref|NP_724763.1| lightoid, isoform D [Drosophila melanogaster]
gi|23240365|gb|AAM68816.2| lightoid, isoform D [Drosophila melanogaster]
gi|237681229|gb|ACR10181.1| FI09421p [Drosophila melanogaster]
Length = 222
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 54 VRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVK 113
+R +I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++
Sbjct: 3 LRSKAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQ 62
Query: 114 WRDQQKIKLQLWDIAGQ 130
W ++LQLWDIAGQ
Sbjct: 63 WDANTIVRLQLWDIAGQ 79
>gi|194754483|ref|XP_001959524.1| GF12008 [Drosophila ananassae]
gi|190620822|gb|EDV36346.1| GF12008 [Drosophila ananassae]
Length = 405
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 188 PAIMTSTSEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 247
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 248 NTIVRLQLWDIAGQ 261
>gi|47227097|emb|CAG00459.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIGD VGKTS ++RYV + +Y+ T+GVDFA+K++ W D + ++LQLWDI
Sbjct: 17 EHLFKVLVIGDLGVGKTSIIRRYVHQAYSNNYRATIGVDFAMKVLNW-DSETVRLQLWDI 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|47183024|emb|CAG13912.1| unnamed protein product [Tetraodon nigroviridis]
Length = 79
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N E L+K++VIGD VGKTS ++RYV + F +Y+ T+GVDFALK++ W DQ+ ++LQ
Sbjct: 4 NHQKEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNW-DQETVRLQ 62
Query: 124 LWDIAG 129
LWDIAG
Sbjct: 63 LWDIAG 68
>gi|193657249|ref|XP_001950152.1| PREDICTED: ras-related protein Rab-38-like isoform 1 [Acyrthosiphon
pisum]
Length = 239
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R S AP E LFK++VIG+ GKTS ++RYV F + Y+ T+GVDFALK ++W
Sbjct: 28 RNSSLAPTEYLFKILVIGELGTGKTSIIKRYVHKFFSQHYRATIGVDFALKSLEWDSNTV 87
Query: 120 IKLQLWDIAGQ 130
I+LQLWDIAGQ
Sbjct: 88 IRLQLWDIAGQ 98
>gi|126327830|ref|XP_001362365.1| PREDICTED: ras-related protein Rab-38-like [Monodelphis domestica]
Length = 211
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK+++W + ++LQLW
Sbjct: 5 PREHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLQWDPETVVRLQLW 64
Query: 126 DIAGQ 130
DIAGQ
Sbjct: 65 DIAGQ 69
>gi|328702314|ref|XP_003241872.1| PREDICTED: ras-related protein Rab-38-like isoform 2 [Acyrthosiphon
pisum]
Length = 214
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R S AP E LFK++VIG+ GKTS ++RYV F + Y+ T+GVDFALK ++W
Sbjct: 3 RNSSLAPTEYLFKILVIGELGTGKTSIIKRYVHKFFSQHYRATIGVDFALKSLEWDSNTV 62
Query: 120 IKLQLWDIAGQ 130
I+LQLWDIAGQ
Sbjct: 63 IRLQLWDIAGQ 73
>gi|25012172|gb|AAN71203.1| GH26660p, partial [Drosophila melanogaster]
Length = 306
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 90 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 149
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 150 NTIVRLQLWDIAGQ 163
>gi|130502148|ref|NP_001076317.1| uncharacterized protein LOC565931 [Danio rerio]
gi|126631826|gb|AAI33897.1| Zgc:162171 protein [Danio rerio]
Length = 224
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E+L KV+VIGD VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 4 ERLLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTVVRLQLWDI 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|47224601|emb|CAG03585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 212
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + I+
Sbjct: 5 SVSECREYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLIR 64
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 65 LQLWDIAGQ 73
>gi|346472783|gb|AEO36236.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F Y+ T+GVDFALK+V+W D I+LQLWDI
Sbjct: 7 EHLYKILVIGELGTGKTSIIKRYVHQFFSHHYRATIGVDFALKVVEWDDNTLIRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|196008659|ref|XP_002114195.1| hypothetical protein TRIADDRAFT_58409 [Trichoplax adhaerens]
gi|190583214|gb|EDV23285.1| hypothetical protein TRIADDRAFT_58409 [Trichoplax adhaerens]
Length = 234
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK+IV+G GKTS ++RYV F ++YK T+GVDFALK++ W + IKLQLWDI
Sbjct: 28 EHLFKIIVVGSKFTGKTSIIRRYVHQYFSENYKATIGVDFALKVINWDAETVIKLQLWDI 87
Query: 128 AGQN 131
AGQ+
Sbjct: 88 AGQD 91
>gi|320167316|gb|EFW44215.1| small GTPase rabE [Capsaspora owczarzaki ATCC 30864]
Length = 265
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
V + S + E +FKVI+IG+ T GKT+ ++RYV NT+ + YK T+GVDFALK++
Sbjct: 31 VTAAAGSTSGALEHVFKVIIIGEGTTGKTALIRRYVDNTWDRTYKSTLGVDFALKVIDIS 90
Query: 116 DQQKIKLQLWDIAGQ 130
Q+ ++LQLWDIAGQ
Sbjct: 91 KQEHVRLQLWDIAGQ 105
>gi|410972497|ref|XP_003992695.1| PREDICTED: ras-related protein Rab-38 [Felis catus]
Length = 211
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQL
Sbjct: 4 AHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQL 63
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 64 WDIAGQ 69
>gi|157114529|ref|XP_001652315.1| rab32 [Aedes aegypti]
gi|157114533|ref|XP_001652317.1| rab32 [Aedes aegypti]
gi|108877258|gb|EAT41483.1| AAEL006880-PB [Aedes aegypti]
gi|108877260|gb|EAT41485.1| AAEL006880-PA [Aedes aegypti]
Length = 294
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Query: 65 APPEK---LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
AP EK L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W I+
Sbjct: 83 APTEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIR 142
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 143 LQLWDIAGQ 151
>gi|332825172|ref|XP_001161467.2| PREDICTED: ras-related protein Rab-32 [Pan troglodytes]
gi|410212486|gb|JAA03462.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410251312|gb|JAA13623.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410295694|gb|JAA26447.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410331643|gb|JAA34768.1| RAB32, member RAS oncogene family [Pan troglodytes]
Length = 225
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|27819805|gb|AAO24951.1| RE56408p [Drosophila melanogaster]
Length = 222
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 54 VRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVK 113
+R +I S + E L+K++VIG GKTSF++RYV F ++Y+ T+GVDFALK+++
Sbjct: 3 LRSKAIMTSTSDKREHLYKILVIGGLGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQ 62
Query: 114 WRDQQKIKLQLWDIAGQ 130
W ++LQLWDIAGQ
Sbjct: 63 WDANTIVRLQLWDIAGQ 79
>gi|403269920|ref|XP_003926953.1| PREDICTED: ras-related protein Rab-32, partial [Saimiri boliviensis
boliviensis]
Length = 212
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 10 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|297679366|ref|XP_002817507.1| PREDICTED: ras-related protein Rab-32 [Pongo abelii]
Length = 225
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|61366674|gb|AAX42891.1| RAB32 member RAS oncogene family [synthetic construct]
Length = 226
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|332213568|ref|XP_003255895.1| PREDICTED: ras-related protein Rab-32 [Nomascus leucogenys]
Length = 225
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|24652026|ref|NP_724764.1| lightoid, isoform C [Drosophila melanogaster]
gi|24652028|ref|NP_724765.1| lightoid, isoform E [Drosophila melanogaster]
gi|17861992|gb|AAL39473.1| LD04613p [Drosophila melanogaster]
gi|21627636|gb|AAM68817.1| lightoid, isoform C [Drosophila melanogaster]
gi|21627637|gb|AAM68818.1| lightoid, isoform E [Drosophila melanogaster]
gi|220942922|gb|ACL84004.1| ltd-PC [synthetic construct]
gi|220953086|gb|ACL89086.1| ltd-PC [synthetic construct]
Length = 388
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W ++LQLWDI
Sbjct: 183 EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDI 242
Query: 128 AGQ 130
AGQ
Sbjct: 243 AGQ 245
>gi|302564755|ref|NP_001180823.1| ras-related protein Rab-32 [Macaca mulatta]
gi|402868027|ref|XP_003898124.1| PREDICTED: ras-related protein Rab-32 [Papio anubis]
gi|380809090|gb|AFE76420.1| ras-related protein Rab-32 [Macaca mulatta]
Length = 225
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|157820973|ref|NP_001102372.1| ras-related protein Rab-32 [Rattus norvegicus]
gi|149039546|gb|EDL93708.1| similar to RAB32 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 223
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F ++Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLVRLQLWDI 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|348524949|ref|XP_003449985.1| PREDICTED: ras-related protein Rab-32-like isoform 1 [Oreochromis
niloticus]
Length = 213
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++
Sbjct: 5 SVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVR 64
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 65 LQLWDIAGQ 73
>gi|54696892|gb|AAV38818.1| RAB32, member RAS oncogene family [synthetic construct]
gi|61366667|gb|AAX42890.1| RAB32 member RAS oncogene family [synthetic construct]
Length = 226
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|395521174|ref|XP_003764693.1| PREDICTED: ras-related protein Rab-38-like [Sarcophilus harrisii]
Length = 211
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P E L+K+ VIGD VGKTS +QRYV F Y+ T+GVDFALK+++W + ++LQLW
Sbjct: 5 PREHLYKLPVIGDLGVGKTSIIQRYVHQNFSSHYRATIGVDFALKVLQWDPETVVRLQLW 64
Query: 126 DIAGQ 130
DIAGQ
Sbjct: 65 DIAGQ 69
>gi|301774833|ref|XP_002922840.1| PREDICTED: ras-related protein Rab-32-like [Ailuropoda melanoleuca]
Length = 281
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W ++ ++LQLWDI
Sbjct: 79 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDI 138
Query: 128 AGQ 130
AGQ
Sbjct: 139 AGQ 141
>gi|410916645|ref|XP_003971797.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 213
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++
Sbjct: 5 SVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVR 64
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 65 LQLWDIAGQ 73
>gi|5803133|ref|NP_006825.1| ras-related protein Rab-32 [Homo sapiens]
gi|2833245|sp|Q13637.3|RAB32_HUMAN RecName: Full=Ras-related protein Rab-32
gi|20379092|gb|AAM21106.1|AF498958_1 small GTP binding protein RAB32 [Homo sapiens]
gi|1575792|gb|AAB09599.1| low Mr GTP-binding protein Rab32 [Homo sapiens]
gi|15929226|gb|AAH15061.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|54696894|gb|AAV38819.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|61356867|gb|AAX41298.1| RAB32 member RAS oncogene family [synthetic construct]
gi|119568218|gb|EAW47833.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|123987477|gb|ABM83808.1| RAB32, member RAS oncogene family [synthetic construct]
gi|123999094|gb|ABM87130.1| RAB32, member RAS oncogene family [synthetic construct]
gi|261861624|dbj|BAI47334.1| RAB32, member RAS oncogene family [synthetic construct]
Length = 225
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|354497825|ref|XP_003511018.1| PREDICTED: ras-related protein Rab-32-like [Cricetulus griseus]
gi|344237517|gb|EGV93620.1| Ras-related protein Rab-32 [Cricetulus griseus]
Length = 223
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F ++Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLVRLQLWDI 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|410906851|ref|XP_003966905.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 225
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E+L KV+VIGD VGKTS + RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 4 ERLLKVLVIGDIGVGKTSIITRYVHQVFSQHYRATIGVDFALKVLNWDHKTVVRLQLWDI 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|198413093|ref|XP_002130668.1| PREDICTED: similar to RAB32, member RAS oncogene family [Ciona
intestinalis]
Length = 208
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK+V W + I+LQLWDI
Sbjct: 7 EYLFKVLVIGELGVGKTSVIKRYVHQIFSQHYRATIGVDFALKVVHWDGETLIRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|410295692|gb|JAA26446.1| RAB32, member RAS oncogene family [Pan troglodytes]
Length = 225
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|1388197|gb|AAB02833.1| low-Mr GTP-binding protein Rab32 [Homo sapiens]
Length = 210
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 8 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 67
Query: 128 AGQ 130
AGQ
Sbjct: 68 AGQ 70
>gi|432896162|ref|XP_004076289.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 207
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIGD VGKTS ++RYV F + Y+ T+GVDF LK+++W + + ++LQLWDI
Sbjct: 5 EFLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFVLKVLQWDNDRVVRLQLWDI 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|157114531|ref|XP_001652316.1| rab32 [Aedes aegypti]
gi|403182835|gb|EJY57660.1| AAEL006880-PC [Aedes aegypti]
Length = 232
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 51 LKLVRVPSIRKSFNAPPEK---LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDF 107
L L + ++ AP EK L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDF
Sbjct: 7 LLLEKSDNLSNMSTAPTEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDF 66
Query: 108 ALKIVKWRDQQKIKLQLWDIAGQ 130
ALK++ W I+LQLWDIAGQ
Sbjct: 67 ALKVLNWDQNTIIRLQLWDIAGQ 89
>gi|241030850|ref|XP_002406512.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
gi|215491988|gb|EEC01629.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
Length = 228
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD GKTS ++RYV F Y+ T+GVDFALK++ W + I+LQLWDI
Sbjct: 22 EHLYKILVIGDLGTGKTSIIKRYVHQFFSHHYRATIGVDFALKVINWDENTLIRLQLWDI 81
Query: 128 AGQ 130
AGQ
Sbjct: 82 AGQ 84
>gi|344264823|ref|XP_003404489.1| PREDICTED: ras-related protein Rab-32-like [Loxodonta africana]
Length = 225
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|348533005|ref|XP_003453996.1| PREDICTED: ras-related protein Rab-32-like [Oreochromis niloticus]
Length = 230
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E+L KV+VIGD VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 4 ERLLKVLVIGDLGVGKTSIIKRYVHQVFSQHYRATIGVDFALKVLNWDHKTVVRLQLWDI 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|41152211|ref|NP_958489.1| ras-related protein Rab-32 [Danio rerio]
gi|29437266|gb|AAH49531.1| RAB32, member RAS oncogene family [Danio rerio]
Length = 213
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++
Sbjct: 5 SVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVR 64
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 65 LQLWDIAGQ 73
>gi|291397122|ref|XP_002714910.1| PREDICTED: low-Mr GTP-binding protein Rab32-like [Oryctolagus
cuniculus]
Length = 230
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 28 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 87
Query: 128 AGQ 130
AGQ
Sbjct: 88 AGQ 90
>gi|329664240|ref|NP_001192879.1| ras-related protein Rab-32 [Bos taurus]
gi|296483942|tpg|DAA26057.1| TPA: RAB32, member RAS oncogene family-like [Bos taurus]
Length = 225
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWD
Sbjct: 23 SEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 82
Query: 127 IAGQ 130
IAGQ
Sbjct: 83 IAGQ 86
>gi|410960188|ref|XP_003986676.1| PREDICTED: ras-related protein Rab-32 [Felis catus]
Length = 225
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|320167989|gb|EFW44888.1| small GTPase rabE [Capsaspora owczarzaki ATCC 30864]
Length = 210
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+V+GD GKTS ++RYV N F YK T+GVDFALK++ W ++LQLWDI
Sbjct: 7 EYLFKVLVVGDIGTGKTSIIKRYVHNIFSMHYKATIGVDFALKVINWEPDTVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|178056544|ref|NP_001116648.1| ras-related protein Rab-32 [Sus scrofa]
gi|122131882|sp|Q06AU5.1|RAB32_PIG RecName: Full=Ras-related protein Rab-32
gi|115394762|gb|ABI97175.1| RAB32 [Sus scrofa]
Length = 226
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 25 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 84
Query: 128 AGQ 130
AGQ
Sbjct: 85 AGQ 87
>gi|50742500|ref|XP_419654.1| PREDICTED: ras-related protein Rab-32 [Gallus gallus]
Length = 218
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 16 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWDI 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|326915700|ref|XP_003204151.1| PREDICTED: ras-related protein Rab-32-like [Meleagris gallopavo]
Length = 218
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 16 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWDI 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|74204808|dbj|BAE35466.1| unnamed protein product [Mus musculus]
Length = 223
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRALVRLQLWDI 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|16741109|gb|AAH16409.1| RAB32, member RAS oncogene family [Mus musculus]
gi|33585672|gb|AAH55945.1| RAB32, member RAS oncogene family [Mus musculus]
Length = 223
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|147903317|ref|NP_001090131.1| RAB32, member RAS oncogene family [Xenopus laevis]
gi|80477119|gb|AAI08513.1| MGC130912 protein [Xenopus laevis]
Length = 222
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 19 EYLFKVLVIGELGVGKTSVIKRYVHQLFSQHYRATIGVDFALKVINWDNNTLVRLQLWDI 78
Query: 128 AGQ 130
AGQ
Sbjct: 79 AGQ 81
>gi|13385896|ref|NP_080681.1| ras-related protein Rab-32 [Mus musculus]
gi|37999779|sp|Q9CZE3.3|RAB32_MOUSE RecName: Full=Ras-related protein Rab-32
gi|12849626|dbj|BAB28421.1| unnamed protein product [Mus musculus]
gi|23268303|gb|AAN11298.1| RAB32 [Mus musculus]
gi|26353712|dbj|BAC40486.1| unnamed protein product [Mus musculus]
gi|74186726|dbj|BAE34818.1| unnamed protein product [Mus musculus]
gi|74195856|dbj|BAE30489.1| unnamed protein product [Mus musculus]
gi|74201136|dbj|BAE37425.1| unnamed protein product [Mus musculus]
gi|112293023|dbj|BAF02889.1| Rab32 [Mus musculus]
gi|148671579|gb|EDL03526.1| RAB32, member RAS oncogene family [Mus musculus]
Length = 223
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|395535108|ref|XP_003769574.1| PREDICTED: ras-related protein Rab-32 [Sarcophilus harrisii]
Length = 225
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 24 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWDI 83
Query: 128 AGQ 130
AGQ
Sbjct: 84 AGQ 86
>gi|449497012|ref|XP_004176408.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-32
[Taeniopygia guttata]
gi|449277837|gb|EMC85859.1| Ras-related protein Rab-32 [Columba livia]
Length = 218
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 16 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWDI 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|390369193|ref|XP_782400.2| PREDICTED: ras-related protein Rab-32-like [Strongylocentrotus
purpuratus]
Length = 214
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIGD VGKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 9 EHLYKVLVIGDLGVGKTSVIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLWDI 68
Query: 128 AGQ 130
AGQ
Sbjct: 69 AGQ 71
>gi|196009291|ref|XP_002114511.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
gi|190583530|gb|EDV23601.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
Length = 184
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK-IKLQ 123
A E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W+D ++LQ
Sbjct: 5 AKKEYLYKILVIGDLGVGKTSIIKRYVHQFFSTQYRATIGVDFALKVIDWKDSNSVVRLQ 64
Query: 124 LWDIAGQ 130
LWDIAGQ
Sbjct: 65 LWDIAGQ 71
>gi|42542760|gb|AAH66502.1| Rab32 protein [Danio rerio]
gi|62089548|gb|AAH92179.1| Rab32 protein [Danio rerio]
gi|182891326|gb|AAI64307.1| Rab32 protein [Danio rerio]
Length = 213
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++
Sbjct: 5 SVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVR 64
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 65 LQLWDIAGQ 73
>gi|417408732|gb|JAA50904.1| Putative gtp-binding protein-like ras superfamily, partial
[Desmodus rotundus]
Length = 215
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 13 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 72
Query: 128 AGQ 130
AGQ
Sbjct: 73 AGQ 75
>gi|290983359|ref|XP_002674396.1| rab family small GTPase [Naegleria gruberi]
gi|284087986|gb|EFC41652.1| rab family small GTPase [Naegleria gruberi]
Length = 221
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++RYV N F YK T+GVDFALK++ W D I+LQLWDI
Sbjct: 10 EYLYKILVVGDIGTGKTSIIKRYVHNIFSNTYKSTIGVDFALKVLNWDDNIIIRLQLWDI 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|348524951|ref|XP_003449986.1| PREDICTED: ras-related protein Rab-32-like isoform 2 [Oreochromis
niloticus]
Length = 206
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 4 EYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWDI 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|432945329|ref|XP_004083544.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 213
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++
Sbjct: 5 SVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVR 64
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 65 LQLWDIAGQ 73
>gi|344293786|ref|XP_003418601.1| PREDICTED: ras-related protein Rab-38-like [Loxodonta africana]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|195474974|ref|XP_002089761.1| GE22467 [Drosophila yakuba]
gi|194175862|gb|EDW89473.1| GE22467 [Drosophila yakuba]
Length = 560
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I S + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK+++W
Sbjct: 344 PAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDA 403
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 404 NTIVRLQLWDIAGQ 417
>gi|313228374|emb|CBY23525.1| unnamed protein product [Oikopleura dioica]
gi|313241691|emb|CBY33914.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK +VIGD VGKTS ++RYV + F YK T+GVDFALK++ W + I+LQLWDI
Sbjct: 3 EYLFKTLVIGDIGVGKTSLIKRYVHHVFGSTYKPTIGVDFALKVINWDSETIIRLQLWDI 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|291384118|ref|XP_002708691.1| PREDICTED: RAB38 [Oryctolagus cuniculus]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|91082557|ref|XP_974043.1| PREDICTED: similar to lightoid CG8024-PB [Tribolium castaneum]
gi|270007568|gb|EFA04016.1| hypothetical protein TcasGA2_TC014165 [Tribolium castaneum]
Length = 371
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ L+K++VIGD GKTS ++RYV F + Y+ T+GVDFALK++ W D I+LQLWDI
Sbjct: 166 DHLYKILVIGDLGAGKTSIIKRYVHRFFTQHYRATIGVDFALKVLNWDDNTLIRLQLWDI 225
Query: 128 AGQ 130
AGQ
Sbjct: 226 AGQ 228
>gi|332210934|ref|XP_003254567.1| PREDICTED: ras-related protein Rab-38 [Nomascus leucogenys]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|403287827|ref|XP_003935127.1| PREDICTED: ras-related protein Rab-38 [Saimiri boliviensis
boliviensis]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|11641237|ref|NP_071732.1| ras-related protein Rab-38 [Homo sapiens]
gi|114639714|ref|XP_508683.2| PREDICTED: ras-related protein Rab-38 [Pan troglodytes]
gi|297689915|ref|XP_002822380.1| PREDICTED: ras-related protein Rab-38 [Pongo abelii]
gi|397526221|ref|XP_003833034.1| PREDICTED: ras-related protein Rab-38 [Pan paniscus]
gi|12230516|sp|P57729.1|RAB38_HUMAN RecName: Full=Ras-related protein Rab-38; AltName: Full=Melanoma
antigen NY-MEL-1
gi|11119734|gb|AAG30731.1| Rab-related GTP-binding protein [Homo sapiens]
gi|16041835|gb|AAH15808.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|32880027|gb|AAP88844.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|61360935|gb|AAX41956.1| RAB38 member RAS oncogene family [synthetic construct]
gi|61360941|gb|AAX41957.1| RAB38 member RAS oncogene family [synthetic construct]
gi|61360949|gb|AAX41958.1| RAB38 member RAS oncogene family [synthetic construct]
gi|74418830|gb|ABA03166.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|119579769|gb|EAW59365.1| RAB38, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119579770|gb|EAW59366.1| RAB38, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123980446|gb|ABM82052.1| RAB38, member RAS oncogene family [synthetic construct]
gi|123995259|gb|ABM85231.1| RAB38, member RAS oncogene family [synthetic construct]
gi|410255632|gb|JAA15783.1| RAB38, member RAS oncogene family [Pan troglodytes]
gi|410332977|gb|JAA35435.1| RAB38, member RAS oncogene family [Pan troglodytes]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|350588369|ref|XP_003482633.1| PREDICTED: ras-related protein Rab-38-like [Sus scrofa]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|170053912|ref|XP_001862890.1| rab32 [Culex quinquefasciatus]
gi|167874360|gb|EDS37743.1| rab32 [Culex quinquefasciatus]
Length = 215
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Query: 65 APPEK---LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
AP EK L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W I+
Sbjct: 4 APTEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIR 63
Query: 122 LQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 64 LQLWDIAGQ 72
>gi|444728470|gb|ELW68927.1| Ras-related protein Rab-38 [Tupaia chinensis]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|348565725|ref|XP_003468653.1| PREDICTED: ras-related protein Rab-38-like [Cavia porcellus]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|296216859|ref|XP_002754753.1| PREDICTED: ras-related protein Rab-38-like [Callithrix jacchus]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|395814706|ref|XP_003780884.1| PREDICTED: ras-related protein Rab-38 [Otolemur garnettii]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|312377455|gb|EFR24284.1| hypothetical protein AND_11247 [Anopheles darlingi]
Length = 218
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 10 EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIRLQLWDI 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|301779279|ref|XP_002925057.1| PREDICTED: ras-related protein Rab-38-like [Ailuropoda melanoleuca]
gi|281337581|gb|EFB13165.1| hypothetical protein PANDA_014483 [Ailuropoda melanoleuca]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|426370059|ref|XP_004051994.1| PREDICTED: ras-related protein Rab-38 [Gorilla gorilla gorilla]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|345787949|ref|XP_850212.2| PREDICTED: ras-related protein Rab-38 [Canis lupus familiaris]
Length = 211
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|321466231|gb|EFX77228.1| hypothetical protein DAPPUDRAFT_305892 [Daphnia pulex]
Length = 668
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIG+ GKTS ++RYV F + Y+ T+GVDFALK+V W I+LQLWDI
Sbjct: 462 EHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVVHWDQSTVIRLQLWDI 521
Query: 128 AGQ 130
AGQ
Sbjct: 522 AGQ 524
>gi|109108201|ref|XP_001104269.1| PREDICTED: ras-related protein Rab-38 [Macaca mulatta]
gi|402894879|ref|XP_003910569.1| PREDICTED: ras-related protein Rab-38 [Papio anubis]
gi|355566930|gb|EHH23309.1| hypothetical protein EGK_06752 [Macaca mulatta]
Length = 211
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|431838500|gb|ELK00432.1| Ras-related protein Rab-38 [Pteropus alecto]
Length = 211
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|58332248|ref|NP_001011276.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|56789062|gb|AAH87989.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266817|emb|CAJ83386.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 223
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W ++LQLWDI
Sbjct: 20 EYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSSTLVRLQLWDI 79
Query: 128 AGQ 130
AGQ
Sbjct: 80 AGQ 82
>gi|355714911|gb|AES05158.1| RAB38, member RAS oncoprotein family [Mustela putorius furo]
Length = 230
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 26 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 85
Query: 128 AGQ 130
AGQ
Sbjct: 86 AGQ 88
>gi|239792594|dbj|BAH72623.1| ACYPI002292 [Acyrthosiphon pisum]
Length = 113
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R S AP E LFK++VI + GKTS ++RYV F + Y+ T+GVDFALK ++W
Sbjct: 28 RNSSLAPTEYLFKILVISELGTGKTSIIKRYVHKFFSQHYRATIGVDFALKSLEWDSNTV 87
Query: 120 IKLQLWDIAGQ 130
I+LQLWDIAGQ
Sbjct: 88 IRLQLWDIAGQ 98
>gi|126310667|ref|XP_001370750.1| PREDICTED: ras-related protein Rab-32-like [Monodelphis domestica]
Length = 225
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 24 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWDI 83
Query: 128 AGQ 130
AGQ
Sbjct: 84 AGQ 86
>gi|426251467|ref|XP_004019443.1| PREDICTED: ras-related protein Rab-38 [Ovis aries]
Length = 211
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|21105857|ref|NP_082514.4| ras-related protein Rab-38 [Mus musculus]
gi|46577080|sp|Q8QZZ8.1|RAB38_MOUSE RecName: Full=Ras-related protein Rab-38
gi|20087023|gb|AAL38663.1| RAB38 [Mus musculus]
gi|20147508|gb|AAM12528.1| RAB38 [Mus musculus]
gi|26336811|dbj|BAC32089.1| unnamed protein product [Mus musculus]
gi|26344095|dbj|BAC35704.1| unnamed protein product [Mus musculus]
gi|58476762|gb|AAH89578.1| RAB38, member of RAS oncogene family [Mus musculus]
gi|74227083|dbj|BAE38335.1| unnamed protein product [Mus musculus]
gi|112293037|dbj|BAF02896.1| Rab38 [Mus musculus]
gi|148674846|gb|EDL06793.1| Rab38, member of RAS oncogene family [Mus musculus]
Length = 211
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|354498049|ref|XP_003511128.1| PREDICTED: ras-related protein Rab-38-like [Cricetulus griseus]
gi|344250686|gb|EGW06790.1| Ras-related protein Rab-38 [Cricetulus griseus]
Length = 211
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|33150768|gb|AAP97262.1|AF136172_1 rab-related GTP-binding protein [Homo sapiens]
Length = 212
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|118777684|ref|XP_308216.2| AGAP007654-PA [Anopheles gambiae str. PEST]
gi|116132020|gb|EAA04140.2| AGAP007654-PA [Anopheles gambiae str. PEST]
Length = 215
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 10 EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIRLQLWDI 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|432108510|gb|ELK33226.1| Ras-related protein Rab-38 [Myotis davidii]
Length = 211
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W ++LQL
Sbjct: 4 ANKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPDTVVRLQL 63
Query: 125 WDIAGQ 130
WDIAGQ
Sbjct: 64 WDIAGQ 69
>gi|296471962|tpg|DAA14077.1| TPA: RAB38, member of RAS oncogene family-like [Bos taurus]
Length = 268
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 64 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 123
Query: 128 AGQ 130
AGQ
Sbjct: 124 AGQ 126
>gi|21955138|ref|NP_665717.1| ras-related protein Rab-38 [Rattus norvegicus]
gi|206543|gb|AAA42000.1| rab-related GTP-binding protein [Rattus norvegicus]
gi|47125439|gb|AAH70513.1| RAB38, member RAS oncogene family [Rattus norvegicus]
gi|149069033|gb|EDM18585.1| Rab38, member of RAS oncogene family [Rattus norvegicus]
Length = 211
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|348511017|ref|XP_003443041.1| PREDICTED: ras-related protein Rab-32-like [Oreochromis niloticus]
Length = 224
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R S EKLFKV+VIGD VGK+S V RYV F + YK ++GVDFALK ++W +
Sbjct: 3 RISVTLSTEKLFKVLVIGDLGVGKSSVVMRYVNKRFDETYKASIGVDFALKTIEWDPKTV 62
Query: 120 IKLQLWDIAGQ 130
++LQLWDI GQ
Sbjct: 63 VRLQLWDIGGQ 73
>gi|149719243|ref|XP_001489548.1| PREDICTED: ras-related protein Rab-38-like [Equus caballus]
Length = 211
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK+++W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLQWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|12844005|dbj|BAB26198.1| unnamed protein product [Mus musculus]
Length = 211
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|426235199|ref|XP_004011577.1| PREDICTED: uncharacterized protein LOC101102738 [Ovis aries]
Length = 443
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 66 PPEK---LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
PPE LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++L
Sbjct: 237 PPETSEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 296
Query: 123 QLWDIAGQ 130
QLWDIAGQ
Sbjct: 297 QLWDIAGQ 304
>gi|327261967|ref|XP_003215798.1| PREDICTED: ras-related protein Rab-32-like [Anolis carolinensis]
Length = 235
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 33 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLPWDSRTLVRLQLWDI 92
Query: 128 AGQ 130
AGQ
Sbjct: 93 AGQ 95
>gi|358419550|ref|XP_001252195.3| PREDICTED: ras-related protein Rab-38 isoform 1 [Bos taurus]
gi|359080887|ref|XP_002699093.2| PREDICTED: ras-related protein Rab-38 [Bos taurus]
gi|440893046|gb|ELR45967.1| Ras-related protein Rab-38 [Bos grunniens mutus]
Length = 211
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|339247021|ref|XP_003375144.1| Ras-related protein Rab-32 [Trichinella spiralis]
gi|316971523|gb|EFV55281.1| Ras-related protein Rab-32 [Trichinella spiralis]
Length = 247
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 32 TPIVSEQGDGEIIEIIDPSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYV 91
T ++SE D + S+K N E FK++VIGD GKTS ++RYV
Sbjct: 7 TVVLSEDSDSHFSTSTEMSMKS----------NRSGEYTFKILVIGDICTGKTSIIRRYV 56
Query: 92 QNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
N F Y+ T+GVDFA+KI + +LQ WDIAGQ
Sbjct: 57 HNLFSSQYQATIGVDFAMKIFHCSNSSTARLQFWDIAGQ 95
>gi|301614231|ref|XP_002936591.1| PREDICTED: ras-related protein Rab-38-like [Xenopus (Silurana)
tropicalis]
Length = 212
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W ++LQLWDI
Sbjct: 7 EHLYKILVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDSDTVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|194227608|ref|XP_001496437.2| PREDICTED: hypothetical protein LOC100065954 [Equus caballus]
Length = 430
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK++VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W ++ ++LQLWDI
Sbjct: 228 EHLFKMLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDI 287
Query: 128 AGQ 130
AGQ
Sbjct: 288 AGQ 290
>gi|281350978|gb|EFB26562.1| hypothetical protein PANDA_011856 [Ailuropoda melanoleuca]
Length = 209
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 49/63 (77%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W ++ ++LQLWDI
Sbjct: 6 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDI 65
Query: 128 AGQ 130
AG+
Sbjct: 66 AGR 68
>gi|224043671|ref|XP_002188382.1| PREDICTED: ras-related protein Rab-38 [Taeniopygia guttata]
Length = 212
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 8 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLNWDAETVVRLQLWDI 67
Query: 128 AGQ 130
AGQ
Sbjct: 68 AGQ 70
>gi|449269571|gb|EMC80332.1| Ras-related protein Rab-38 [Columba livia]
Length = 212
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 8 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDAETVVRLQLWDI 67
Query: 128 AGQ 130
AGQ
Sbjct: 68 AGQ 70
>gi|89258439|gb|ABD65443.1| Rab32 [Suberites domuncula]
Length = 212
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
+ S E L+K++VIGD GKTS ++RYV F Y+ T+GVDFALK++ W +
Sbjct: 1 MSTSAGGKQEHLYKILVIGDLGTGKTSIIKRYVHQFFSPHYRATIGVDFALKVLNWDNNT 60
Query: 119 KIKLQLWDIAGQ 130
I+LQLWDIAGQ
Sbjct: 61 TIRLQLWDIAGQ 72
>gi|291227653|ref|XP_002733795.1| PREDICTED: lightoid-like [Saccoglossus kowalevskii]
Length = 217
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIGD GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 9 EHLYKVLVIGDLGTGKTSVIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLWDI 68
Query: 128 AGQ 130
AGQ
Sbjct: 69 AGQ 71
>gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis]
gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIG+ VGKTS ++RY + F +YK T+GVDFALKI+ W ++ KI LQLWD+
Sbjct: 14 EHLYKVLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFALKIIHWDEKTKINLQLWDV 73
Query: 128 AGQ 130
AG
Sbjct: 74 AGH 76
>gi|340379925|ref|XP_003388475.1| PREDICTED: ras-related protein Rab-32-like [Amphimedon
queenslandica]
Length = 210
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIGD GKTS ++RYV F Y+ T+GVDFALK++ W + I+LQLWDI
Sbjct: 9 EHLYKVLVIGDLGTGKTSIIKRYVHQFFSPHYRATIGVDFALKVLNWDNNTTIRLQLWDI 68
Query: 128 AGQ 130
AGQ
Sbjct: 69 AGQ 71
>gi|390355996|ref|XP_786497.2| PREDICTED: ras-related protein Rab-7L1-like [Strongylocentrotus
purpuratus]
Length = 278
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
EKLFKVI++GD VGKT+FV RYV F +K TVGVDFALK ++ Q ++LQLWDI
Sbjct: 72 EKLFKVIIVGDSLVGKTTFVHRYVSGKFDPGFKTTVGVDFALKKIERSKQDIVRLQLWDI 131
Query: 128 AGQ 130
AGQ
Sbjct: 132 AGQ 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVG 104
EKLFKVI++GD VGKT+FV RYV F +K TVG
Sbjct: 9 EKLFKVIIVGDSLVGKTTFVHRYVSGKFDPGFKTTVG 45
>gi|189529263|ref|XP_001342875.2| PREDICTED: ras-related protein Rab-38 [Danio rerio]
Length = 211
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F +Y+ T+GVDFALK++ DQ+ ++LQLWDI
Sbjct: 8 EHLYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNL-DQETVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|384496458|gb|EIE86949.1| hypothetical protein RO3G_11660 [Rhizopus delemar RA 99-880]
Length = 212
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++RYV N F +YK T+GVDFALK+++W ++LQLWDI
Sbjct: 3 EYLYKILVVGDLGTGKTSIIRRYVHNIFSTNYKSTIGVDFALKVIQWGPDIIVRLQLWDI 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|118085220|ref|XP_425653.2| PREDICTED: ras-related protein Rab-38 [Gallus gallus]
gi|326914516|ref|XP_003203571.1| PREDICTED: ras-related protein Rab-38-like [Meleagris gallopavo]
Length = 212
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 8 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDAETVVRLQLWDI 67
Query: 128 AGQ 130
AGQ
Sbjct: 68 AGQ 70
>gi|195401601|ref|XP_002059401.1| GJ18542 [Drosophila virilis]
gi|194142407|gb|EDW58813.1| GJ18542 [Drosophila virilis]
Length = 660
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W
Sbjct: 445 PTIMSPSGEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLHWDA 504
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 505 NTIVRLQLWDIAGQ 518
>gi|351701471|gb|EHB04390.1| Ras-related protein Rab-38 [Heterocephalus glaber]
Length = 176
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDI 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|281200842|gb|EFA75058.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 250
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++R+V N F YK T+GVDFALK++ W + +++LQLWDI
Sbjct: 12 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 71
Query: 128 AGQ 130
AGQ
Sbjct: 72 AGQ 74
>gi|395834788|ref|XP_003790374.1| PREDICTED: uncharacterized protein LOC100955231 [Otolemur
garnettii]
Length = 518
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 316 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 375
Query: 128 AGQ 130
AGQ
Sbjct: 376 AGQ 378
>gi|440801165|gb|ELR22187.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+V+GD GKTS ++RYV N F YK T+GVDFALK++ W + ++LQLWDI
Sbjct: 11 EYLYKVLVVGDIGTGKTSIIKRYVHNIFSMHYKSTIGVDFALKVINWDPKTIVRLQLWDI 70
Query: 128 AGQ 130
AGQ
Sbjct: 71 AGQ 73
>gi|260824890|ref|XP_002607400.1| hypothetical protein BRAFLDRAFT_204961 [Branchiostoma floridae]
gi|229292747|gb|EEN63410.1| hypothetical protein BRAFLDRAFT_204961 [Branchiostoma floridae]
Length = 180
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIGD GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 10 EHLYKILVIGDLGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLWDI 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|330791341|ref|XP_003283752.1| Rab GTPase [Dictyostelium purpureum]
gi|325086375|gb|EGC39766.1| Rab GTPase [Dictyostelium purpureum]
Length = 218
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++R+V N F YK T+GVDFALK++ W + +++LQLWDI
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 72
Query: 128 AGQ 130
AGQ
Sbjct: 73 AGQ 75
>gi|4566765|gb|AAD23450.1|AF116859_1 small GTPase rabE [Dictyostelium discoideum]
Length = 228
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++R+V N F YK T+GVDFALK++ W + +++LQLWDI
Sbjct: 22 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 81
Query: 128 AGQ 130
AGQ
Sbjct: 82 AGQ 84
>gi|328871008|gb|EGG19380.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 215
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++R+V N F YK T+GVDFALK++ W + +++LQLWDI
Sbjct: 11 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVLNWDPRTEVRLQLWDI 70
Query: 128 AGQ 130
AGQ
Sbjct: 71 AGQ 73
>gi|66810506|ref|XP_638960.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897084|sp|Q54QR3.1|RB32A_DICDI RecName: Full=Ras-related protein Rab-32A
gi|60467547|gb|EAL65568.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 219
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKTS ++R+V N F YK T+GVDFALK++ W + +++LQLWDI
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 72
Query: 128 AGQ 130
AGQ
Sbjct: 73 AGQ 75
>gi|195119442|ref|XP_002004240.1| GI19816 [Drosophila mojavensis]
gi|193909308|gb|EDW08175.1| GI19816 [Drosophila mojavensis]
Length = 665
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W
Sbjct: 450 PTIMSPSGEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLHWDA 509
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 510 NTIVRLQLWDIAGQ 523
>gi|170590099|ref|XP_001899810.1| Ras family protein [Brugia malayi]
gi|158592729|gb|EDP31326.1| Ras family protein [Brugia malayi]
Length = 230
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GK+S VQRY N F + YK TVGVDFA + + W D+ ++LQLWDI+G
Sbjct: 22 LFKILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGVDFATRTLIWSDEATLRLQLWDISG 81
Query: 130 QN 131
Q+
Sbjct: 82 QD 83
>gi|195029497|ref|XP_001987609.1| GH19866 [Drosophila grimshawi]
gi|193903609|gb|EDW02476.1| GH19866 [Drosophila grimshawi]
Length = 664
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
P+I + E L+K++VIG+ GKTSF++RYV F ++Y+ T+GVDFALK++ W
Sbjct: 448 PTIMAPSSEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLHWDT 507
Query: 117 QQKIKLQLWDIAGQ 130
++LQLWDIAGQ
Sbjct: 508 NTIVRLQLWDIAGQ 521
>gi|340726280|ref|XP_003401488.1| PREDICTED: hypothetical protein LOC100644037 [Bombus terrestris]
Length = 678
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 52 KLVRVPSIRKSFNAPP-------EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVG 104
K+V S+ NAP E L+K++VIG+ GKTS ++RYV F + Y+ T+G
Sbjct: 449 KVVSQDSMSSQNNAPNAGLGDKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIG 508
Query: 105 VDFALKIVKWRDQQKIKLQLWDIAGQ 130
VDFALK++ W I+LQLWDIAGQ
Sbjct: 509 VDFALKVLNWDPHTIIRLQLWDIAGQ 534
>gi|391343988|ref|XP_003746287.1| PREDICTED: ras-related protein Rab-32-like [Metaseiulus
occidentalis]
Length = 245
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 52 KLVRVPSIRKSFNAPP----EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDF 107
+++R P R P + L+KV+VIG+ GKTS ++RYV + + Y+ T+GVDF
Sbjct: 40 RILRGPYYRIEMATPAADPRDFLYKVLVIGELGTGKTSIIRRYVHKAYSEHYRATIGVDF 99
Query: 108 ALKIVKWRDQQKIKLQLWDIAGQ 130
ALK+++W + ++LQLWDIAGQ
Sbjct: 100 ALKVIQWDENTVVRLQLWDIAGQ 122
>gi|350405324|ref|XP_003487400.1| PREDICTED: hypothetical protein LOC100750072 [Bombus impatiens]
Length = 678
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 52 KLVRVPSIRKSFNAPP-------EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVG 104
K+V S+ NAP E L+K++VIG+ GKTS ++RYV F + Y+ T+G
Sbjct: 449 KVVSQDSMSSQNNAPNAGLGDKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIG 508
Query: 105 VDFALKIVKWRDQQKIKLQLWDIAGQ 130
VDFALK++ W I+LQLWDIAGQ
Sbjct: 509 VDFALKVLNWDPHTIIRLQLWDIAGQ 534
>gi|189053349|dbj|BAG35135.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L KV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 23 EHLSKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82
Query: 128 AGQ 130
AGQ
Sbjct: 83 AGQ 85
>gi|348559734|ref|XP_003465670.1| PREDICTED: ras-related protein Rab-32-like [Cavia porcellus]
Length = 221
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+V+G+ VGKTS ++RYV F + Y+ T+GVDFALK + W + ++LQLWDI
Sbjct: 22 EHLFKVLVVGELGVGKTSIIKRYVHKLFSQHYRATIGVDFALKALNWDSRTLVRLQLWDI 81
Query: 128 AGQ 130
AG+
Sbjct: 82 AGK 84
>gi|332027672|gb|EGI67740.1| Ras-related protein Rab-32 [Acromyrmex echinatior]
Length = 287
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 8/81 (9%)
Query: 58 SIRKSFNAPP--------EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFAL 109
++RKS N E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFAL
Sbjct: 63 AVRKSSNNASNLGVSEKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFAL 122
Query: 110 KIVKWRDQQKIKLQLWDIAGQ 130
K++ W I+LQLWDIAGQ
Sbjct: 123 KVLNWDPHTIIRLQLWDIAGQ 143
>gi|357608836|gb|EHJ66182.1| Rab-related protein [Danaus plexippus]
Length = 629
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 419 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 478
Query: 128 AGQ 130
AGQ
Sbjct: 479 AGQ 481
>gi|326427102|gb|EGD72672.1| hypothetical protein PTSG_04403 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+ +KVIVIGD VGKTS + RY TF + YK T+GVDFALK+V+ + +Q + LQLWD
Sbjct: 7 PDGPYKVIVIGDGAVGKTSIISRYALGTFDEGYKKTLGVDFALKLVERKGKQDVYLQLWD 66
Query: 127 IAGQN 131
IAGQ+
Sbjct: 67 IAGQD 71
>gi|443713143|gb|ELU06149.1| hypothetical protein CAPTEDRAFT_64412, partial [Capitella teleta]
Length = 190
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 20 EHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLWDI 79
Query: 128 AGQ 130
AGQ
Sbjct: 80 AGQ 82
>gi|383866195|ref|XP_003708556.1| PREDICTED: uncharacterized protein LOC100874872 [Megachile
rotundata]
Length = 665
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 52 KLVRVPSIRKSFNAPP-------EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVG 104
K+ S+ NAP E L+K++VIG+ GKTS ++RYV F + Y+ T+G
Sbjct: 436 KIASQESMSSQNNAPNAGVGEKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIG 495
Query: 105 VDFALKIVKWRDQQKIKLQLWDIAGQ 130
VDFALK++ W I+LQLWDIAGQ
Sbjct: 496 VDFALKVLNWDPHTIIRLQLWDIAGQ 521
>gi|47213472|emb|CAF91129.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E+L KV+VIGD VGKTS + RYV F + Y+ T+GVDFAL+++ W + ++LQLWDI
Sbjct: 22 ERLLKVLVIGDLGVGKTSIITRYVHQVFSQHYRATIGVDFALRVLDWDHKTVVRLQLWDI 81
Query: 128 AG 129
AG
Sbjct: 82 AG 83
>gi|303274120|gb|ADM07446.1| Rab32 [Helicoverpa armigera]
Length = 231
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 21 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|440804116|gb|ELR24994.1| lightoid family protein [Acanthamoeba castellanii str. Neff]
Length = 216
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E L+KV+V+GD GKT+ ++RYV N + YK T+GVDFALK + W + ++LQLWD
Sbjct: 7 SEYLYKVLVVGDMGTGKTAIIRRYVNNMYSDSYKSTIGVDFALKEINWDSKTLVRLQLWD 66
Query: 127 IAGQ 130
IAGQ
Sbjct: 67 IAGQ 70
>gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis]
Length = 186
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRYV N F ++YK T+GVDFA K++ + + ++LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 183
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRYV N F ++YK T+GVDFA K++ + + ++LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis]
gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis]
gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRYV N F ++YK T+GVDFA K++ + + ++LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|332020863|gb|EGI61261.1| Ras-related protein Rab-32 [Acromyrmex echinatior]
Length = 218
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K + W Q KI LQLWDI
Sbjct: 21 EHLFKCLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKTLDWDPQTKINLQLWDI 80
Query: 128 AGQ 130
AG
Sbjct: 81 AGH 83
>gi|402585290|gb|EJW79230.1| Ras family protein, partial [Wuchereria bancrofti]
Length = 225
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GK+S VQRY N F + YK TVGVDFA + + W D ++LQLWDI+G
Sbjct: 17 LFKILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGVDFATRTLLWSDGATLRLQLWDISG 76
Query: 130 QN 131
Q+
Sbjct: 77 QD 78
>gi|410930402|ref|XP_003978587.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 213
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
EKLFKV+VIGD VGK+S + +YV+ F + YK ++GVDFALK ++W Q ++LQ WDI
Sbjct: 11 EKLFKVLVIGDLGVGKSSVILQYVKKCFMEKYKASIGVDFALKTIEWDPQTLVRLQFWDI 70
Query: 128 AGQ 130
AGQ
Sbjct: 71 AGQ 73
>gi|307202148|gb|EFN81648.1| Ras-related protein Rab-32 [Harpegnathos saltator]
Length = 657
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 451 EHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDPHTIIRLQLWDI 510
Query: 128 AGQ 130
AGQ
Sbjct: 511 AGQ 513
>gi|47221259|emb|CAG13195.1| unnamed protein product [Tetraodon nigroviridis]
Length = 288
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
EKLFKV+VIGD VGK+S + RYV F + YK ++GVDFALK ++W Q ++LQ WDI
Sbjct: 2 EKLFKVLVIGDLGVGKSSVILRYVNKRFVEKYKASIGVDFALKTIEWDPQTVVRLQFWDI 61
Query: 128 AGQ 130
AGQ
Sbjct: 62 AGQ 64
>gi|328778015|ref|XP_001122603.2| PREDICTED: hypothetical protein LOC726887 [Apis mellifera]
Length = 637
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 431 EHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDPHTIIRLQLWDI 490
Query: 128 AGQ 130
AGQ
Sbjct: 491 AGQ 493
>gi|152012618|gb|AAI50366.1| LOC100003274 protein [Danio rerio]
Length = 202
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L+K++VIGD VGKTS ++RYV F +Y+ T+GVDFALK++ DQ+ ++LQLWDIAG
Sbjct: 1 LYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNL-DQETVRLQLWDIAG 59
Query: 130 Q 130
Q
Sbjct: 60 Q 60
>gi|397480709|ref|XP_003811617.1| PREDICTED: uncharacterized protein LOC100988764 [Pan paniscus]
Length = 561
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 359 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 418
Query: 128 AGQ 130
AGQ
Sbjct: 419 AGQ 421
>gi|307182735|gb|EFN69859.1| Ras-related protein Rab-32 [Camponotus floridanus]
Length = 658
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 452 EHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDPHTIIRLQLWDI 511
Query: 128 AGQ 130
AGQ
Sbjct: 512 AGQ 514
>gi|351696045|gb|EHA98963.1| Ras-related protein Rab-32 [Heterocephalus glaber]
Length = 209
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
F+V+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDIAGQ
Sbjct: 10 FRVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLSWDSRTLVRLQLWDIAGQ 69
>gi|167518365|ref|XP_001743523.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778622|gb|EDQ92237.1| predicted protein [Monosiga brevicollis MX1]
Length = 206
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+V+G+ GKTS ++RYV F YK T+GVDFALK++ D ++LQLWDI
Sbjct: 9 EHLFKVLVVGEIGTGKTSIIKRYVHQMFSSHYKATIGVDFALKVLNLDDDTIVRLQLWDI 68
Query: 128 AGQ 130
AGQ
Sbjct: 69 AGQ 71
>gi|156537368|ref|XP_001606642.1| PREDICTED: ras-related protein Rab-32-like [Nasonia vitripennis]
Length = 222
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK++VIGD VGKT+ V+RY + F +YK T+G DFA+K + W Q KIKLQLWDI
Sbjct: 22 ELLFKILVIGDYGVGKTAIVRRYTEGKFSSNYKITIGADFAIKNLDWDSQTKIKLQLWDI 81
Query: 128 AGQ 130
AG
Sbjct: 82 AGH 84
>gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 184
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRYV N F ++YK T+GVDFA K++ + + ++LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKTTIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|307180723|gb|EFN68613.1| Ras-related protein Rab-32 [Camponotus floridanus]
Length = 219
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 44/69 (63%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
F E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K + W KI
Sbjct: 16 HFGHLKEHLFKFLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKTLDWDPHTKIN 75
Query: 122 LQLWDIAGQ 130
LQLWDIAG
Sbjct: 76 LQLWDIAGH 84
>gi|440803967|gb|ELR24850.1| Rab32 protein, putative [Acanthamoeba castellanii str. Neff]
Length = 216
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFKV+V+GD GKT+ ++R V+ F +YK T+GVDFALK +KW + LQLWDI
Sbjct: 15 EFLFKVLVVGDMATGKTAIIRRCVEGAFSDNYKTTIGVDFALKTIKWGSNTLVYLQLWDI 74
Query: 128 AGQ 130
AGQ
Sbjct: 75 AGQ 77
>gi|242005923|ref|XP_002423809.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507025|gb|EEB11071.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 218
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+G+ GKTS ++RYV F + Y+ T+GVDFALK++ W I+LQLWDI
Sbjct: 13 EHLYKILVVGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 72
Query: 128 AGQ 130
AGQ
Sbjct: 73 AGQ 75
>gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRYV N F ++YK T+GVDFA K++ + + ++LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVYNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|225707160|gb|ACO09426.1| Ras-related protein Rab-7L1 [Osmerus mordax]
Length = 206
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTF--KKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
E KV+++GD VGK+S+V+RYV F K+ YK TVGVDFA+K+++W D + ++L LW
Sbjct: 5 EHTHKVLIVGDKNVGKSSYVKRYVNGNFNYKQPYKMTVGVDFAVKVLQWSDTETVRLHLW 64
Query: 126 DIAGQ 130
DIAGQ
Sbjct: 65 DIAGQ 69
>gi|225709988|gb|ACO10840.1| Ras-related protein Rab-32 [Caligus rogercresseyi]
Length = 321
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+L+KVIVIGD GK++F++RY +F ++Y TVGVDF LK+++ +I+LQLWDIA
Sbjct: 16 RLYKVIVIGDVNTGKSAFIRRYTDGSFAENYLATVGVDFHLKVIQLEHNVEIRLQLWDIA 75
Query: 129 GQ 130
GQ
Sbjct: 76 GQ 77
>gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRYV N F ++YK T+GVDFA K++ + + + LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVGLQLWDIAG 60
Query: 130 Q 130
Q
Sbjct: 61 Q 61
>gi|391336000|ref|XP_003742372.1| PREDICTED: ras-related protein Rab-32-like [Metaseiulus
occidentalis]
Length = 216
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + LFKV+VIG+ GKT+ ++RYV + + Y+ T+GVDFALK+++W + ++LQLW
Sbjct: 8 PRDFLFKVLVIGEWGTGKTNIIRRYVHKAYSEHYRPTIGVDFALKVIQWDENTVVRLQLW 67
Query: 126 DIAGQ 130
DIAGQ
Sbjct: 68 DIAGQ 72
>gi|405967886|gb|EKC33005.1| Ras-related protein Rab-32 [Crassostrea gigas]
Length = 270
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ W ++LQLWDI
Sbjct: 16 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDADTIVRLQLWDI 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|345329240|ref|XP_003431352.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-32-like
[Ornithorhynchus anatinus]
Length = 217
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
VP +R E LFKV+VIG+ VGK ++RYV F + Y+ T+GVDFALK+ W
Sbjct: 10 VPEVR-------EHLFKVLVIGELGVGKILMIKRYVHQLFSQLYRATIGVDFALKVFHWD 62
Query: 116 DQQKIKLQLWDIAGQ 130
+ ++LQLWDIAGQ
Sbjct: 63 NATLVRLQLWDIAGQ 77
>gi|71994817|ref|NP_001024837.1| Protein GLO-1 [Caenorhabditis elegans]
gi|63108011|emb|CAE17932.2| Protein GLO-1 [Caenorhabditis elegans]
gi|66170981|gb|AAY42967.1| Rab GTPase GLO-1 [Caenorhabditis elegans]
Length = 212
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+KV+VIGDP VGKTS ++R+V N F +YK T+GVDFALKI+ + + LQ+WDI+GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 131 N 131
+
Sbjct: 72 D 72
>gi|341903548|gb|EGT59483.1| CBN-GLO-1 protein [Caenorhabditis brenneri]
Length = 212
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+KV+VIGDP VGKTS ++R+V N F +YK T+GVDFALKI+ + + LQ+WDI+GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 131 N 131
+
Sbjct: 72 D 72
>gi|290991925|ref|XP_002678585.1| rab family small GTPase [Naegleria gruberi]
gi|284092198|gb|EFC45841.1| rab family small GTPase [Naegleria gruberi]
Length = 284
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N L+KV+V+GD VGKTS ++RY F +Y+ T+GVDF LK + W + + LQ
Sbjct: 54 NKTNNHLYKVLVVGDYAVGKTSLIRRYCTGEFTSNYRITIGVDFCLKHIDWNENTSVSLQ 113
Query: 124 LWDIAGQ 130
LWDIAG
Sbjct: 114 LWDIAGH 120
>gi|431904249|gb|ELK09646.1| Ras-related protein Rab-32 [Pteropus alecto]
Length = 215
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
F V+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDIAGQ
Sbjct: 16 FNVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 75
>gi|440804650|gb|ELR25527.1| Rasrelated protein Rab-32, putative [Acanthamoeba castellanii str.
Neff]
Length = 238
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+G+ GKTS ++RY N F +YK T+GVDFALK ++W + LQLWDI
Sbjct: 30 EFLYKILVVGNMGTGKTSIIKRYCDNEFSDNYKSTIGVDFALKSLEWGHNSMVHLQLWDI 89
Query: 128 AGQ 130
AGQ
Sbjct: 90 AGQ 92
>gi|312075015|ref|XP_003140228.1| Ras family protein [Loa loa]
gi|307764604|gb|EFO23838.1| Ras family protein [Loa loa]
Length = 239
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 57 PSIRKSFNAPPEK---LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVK 113
PS + A P K LFK+++IGD GK+S VQRY N F + YK TVGVDFA + +
Sbjct: 14 PSTSLNGYATPSKDQFLFKILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGVDFATRTLL 73
Query: 114 WRDQQKIKLQLWDIAGQN 131
D ++LQLWDI+GQ+
Sbjct: 74 LSDGTTLRLQLWDISGQD 91
>gi|326434156|gb|EGD79726.1| rab GTPase [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+V+GD VGKTS ++RYV YK T+GVDFALK+++ + ++LQLWDI
Sbjct: 8 ELLYKVLVVGDSGVGKTSLIKRYVHGVASDKYKATIGVDFALKVLQVNENTTVRLQLWDI 67
Query: 128 AGQ 130
AGQ
Sbjct: 68 AGQ 70
>gi|225717948|gb|ACO14820.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 60 RKSFNAPPE-KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
R S+ E +L+KV+VIGD GK+++++RY + F +DY TVGVDF LK++
Sbjct: 6 RSSYGISSESRLYKVLVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGL 65
Query: 119 KIKLQLWDIAGQ 130
+I+LQLWDIAGQ
Sbjct: 66 EIRLQLWDIAGQ 77
>gi|307198015|gb|EFN79075.1| Ras-related protein Rab-32 [Harpegnathos saltator]
Length = 217
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 43/63 (68%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K + W KI LQLWDI
Sbjct: 21 EHLFKFLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKSLDWDPHTKINLQLWDI 80
Query: 128 AGQ 130
AG
Sbjct: 81 AGH 83
>gi|225719728|gb|ACO15710.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 164
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 60 RKSFNAPPE-KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
R S+ E +L+KV+VIGD GK+++++RY + F +DY TVGVDF LK++
Sbjct: 6 RSSYGISSESRLYKVLVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGL 65
Query: 119 KIKLQLWDIAGQ 130
+I+LQLWDIAGQ
Sbjct: 66 EIRLQLWDIAGQ 77
>gi|440800245|gb|ELR21284.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 275
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 50 SLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFAL 109
SL+ R S+ K + L+KV+V+G GKTS + R V+ F YK T+GVDFAL
Sbjct: 52 SLETARRDSVGKEY------LYKVLVVGCAATGKTSLIHRTVEGHFSGQYKSTIGVDFAL 105
Query: 110 KIVKWRDQQKIKLQLWDIAGQ 130
K ++ RDQ KI +QLWDIAGQ
Sbjct: 106 KSLE-RDQHKIFVQLWDIAGQ 125
>gi|324518284|gb|ADY47060.1| Ras-related protein Rab-32 [Ascaris suum]
Length = 231
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GK+S V+RYV N F + YK TVGVDFA+K++ W ++LQ+WDI+G
Sbjct: 21 LFKILIIGDVGTGKSSIVRRYVHNLFNQYYKATVGVDFAMKVLVWDVDTLLRLQIWDISG 80
Query: 130 QN 131
Q+
Sbjct: 81 QD 82
>gi|225718210|gb|ACO14951.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 194
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 60 RKSFNAPPE-KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
R S+ E +L+KV+VIGD GK+++++RY + F +DY TVGVDF LK++
Sbjct: 6 RSSYGISSESRLYKVLVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGL 65
Query: 119 KIKLQLWDIAGQ 130
+I+LQLWDIAGQ
Sbjct: 66 EIRLQLWDIAGQ 77
>gi|350408446|ref|XP_003488406.1| PREDICTED: ras-related protein Rab-32-like [Bombus impatiens]
Length = 219
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K V W KI LQL
Sbjct: 18 AHKELLFKFLVIGDYGVGKTALVRRYTEGRFTSNYKITIGADFAIKAVDWDRFTKINLQL 77
Query: 125 WDIAGQ 130
WD+AG
Sbjct: 78 WDVAGH 83
>gi|290562215|gb|ADD38504.1| Ras-related protein Rab-32 [Lepeophtheirus salmonis]
Length = 429
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
KL+K++ IG + GKTS ++RYV++TF Y+ T+G DF K++ W + ++LQLWDIA
Sbjct: 228 KLYKILFIGSSSAGKTSIIRRYVKHTFTPSYRATIGADFLSKVIHWDEAVTLRLQLWDIA 287
Query: 129 GQN 131
GQ+
Sbjct: 288 GQD 290
>gi|391330189|ref|XP_003739546.1| PREDICTED: ras-related protein Rab-32B-like [Metaseiulus
occidentalis]
Length = 201
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
+ +S N + LFKV+V+GD VGKT+ V+RY + F ++YK T+GVDF +K ++W +
Sbjct: 1 MEQSANYNQDFLFKVLVVGDFGVGKTAIVRRYTEGEFSQNYKITIGVDFLIKRLRWHPNK 60
Query: 119 KIKLQLWDIAGQ 130
+I LQ+WDIAG
Sbjct: 61 QITLQMWDIAGH 72
>gi|340720074|ref|XP_003398468.1| PREDICTED: ras-related protein Rab-32-like [Bombus terrestris]
Length = 219
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K V W KI LQL
Sbjct: 18 AHKELLFKFLVIGDYGVGKTALVRRYTEGRFTSNYKITIGADFAIKAVDWDRFTKINLQL 77
Query: 125 WDIAGQ 130
WD+AG
Sbjct: 78 WDVAGH 83
>gi|355748839|gb|EHH53322.1| hypothetical protein EGM_13940, partial [Macaca fascicularis]
Length = 198
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 73 VIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
V+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDIAGQ
Sbjct: 1 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 58
>gi|47028277|gb|AAT09071.1| RAS related GTP binding protein [Bigelowiella natans]
Length = 210
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KV+V+GD VGKTS +QRY ++F+KDYK T+GV+FALK ++ D + + +QLWDIAG
Sbjct: 6 LLKVLVVGDVAVGKTSIIQRYTNDSFRKDYKTTIGVEFALKPIEV-DDKCVNIQLWDIAG 64
Query: 130 QN 131
Q+
Sbjct: 65 QD 66
>gi|225718126|gb|ACO14909.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 60 RKSFNAPPE-KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
R S+ E +L+KV+VIGD GK+++++RY F +DY TVGVDF LK++
Sbjct: 6 RSSYGISSESRLYKVLVIGDVNAGKSAYIRRYTGGNFSEDYLATVGVDFHLKVLHLLRGL 65
Query: 119 KIKLQLWDIAGQ 130
+I+LQLWDIAGQ
Sbjct: 66 EIRLQLWDIAGQ 77
>gi|340369097|ref|XP_003383085.1| PREDICTED: ras-related protein Rab-7L1-like [Amphimedon
queenslandica]
Length = 206
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E +FKV++IGD +VGKT+FV YV N + + K TVG D+A+K VKW + + I+L LWDI
Sbjct: 3 ESVFKVLLIGDHSVGKTTFVASYVLNKWVPNLKTTVGADYAVKSVKWSETETIRLHLWDI 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|154422404|ref|XP_001584214.1| Ras family protein [Trichomonas vaginalis G3]
gi|121918460|gb|EAY23228.1| Ras family protein [Trichomonas vaginalis G3]
Length = 214
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K+FK++V+G+ GKTS +++YV F + YK T+GVDFA K +KW D+ + LQLWDIA
Sbjct: 15 KIFKILVVGEMGTGKTSLLRKYVDGVFSEYYKTTIGVDFASKDIKWDDKTNVSLQLWDIA 74
Query: 129 GQ 130
GQ
Sbjct: 75 GQ 76
>gi|225709744|gb|ACO10718.1| Ras-related protein Rab-32 [Caligus rogercresseyi]
Length = 202
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+L+KVIVIGD GK++F++RY +F ++Y TVGVDF LK ++ +I+LQLWDIA
Sbjct: 16 RLYKVIVIGDVNTGKSAFIRRYTDGSFAENYLATVGVDFHLKDIQLEHNVEIRLQLWDIA 75
Query: 129 GQ 130
GQ
Sbjct: 76 GQ 77
>gi|156403881|ref|XP_001640136.1| predicted protein [Nematostella vectensis]
gi|156227269|gb|EDO48073.1| predicted protein [Nematostella vectensis]
Length = 190
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
E LFKV+++GD TVGKTSFVQRYV +++YK T+GVDFALK++ W ++LQ+
Sbjct: 2 SEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVRLQV 59
>gi|281208325|gb|EFA82501.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 218
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ L+K++VIGD VGKTS ++RY F +YK T+GVDFA+K V+W + LQLWDI
Sbjct: 11 QHLYKILVIGDYAVGKTSIIKRYCTGMFSPNYKLTIGVDFAVKEVQWDKNTTVSLQLWDI 70
Query: 128 AGQ 130
AG
Sbjct: 71 AGH 73
>gi|290561803|gb|ADD38299.1| Ras-related protein Rab-32 [Lepeophtheirus salmonis]
Length = 308
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 51/62 (82%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+L+K+IVIG+ GK++F++R++ ++F ++Y TVGVDF LK+++++ +++LQLWDIA
Sbjct: 16 RLYKIIVIGEVNSGKSAFIRRFIDDSFCENYYATVGVDFHLKVLQFKKDLEVRLQLWDIA 75
Query: 129 GQ 130
GQ
Sbjct: 76 GQ 77
>gi|270005262|gb|EFA01710.1| hypothetical protein TcasGA2_TC007290 [Tribolium castaneum]
Length = 107
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK++VIGD VGKTS ++RY TF YK T+G DFALK + W ++ +QLWDI
Sbjct: 31 ELLFKILVIGDFGVGKTSIIRRYADGTFSSSYKITIGADFALKSLTWDKNTQVNVQLWDI 90
Query: 128 AGQ 130
AG
Sbjct: 91 AGH 93
>gi|355561998|gb|EHH18630.1| hypothetical protein EGK_15275, partial [Macaca mulatta]
Length = 197
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%)
Query: 74 IVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDIAGQ
Sbjct: 1 LVIGELGVGKTSIIKRYVHQLFSQHYRSTIGVDFALKVLNWDSRTLVRLQLWDIAGQ 57
>gi|443694913|gb|ELT95931.1| hypothetical protein CAPTEDRAFT_219290 [Capitella teleta]
Length = 704
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
NA PE+LFKV+ +GD VGK+SF+ R+ ++FK + T+GVDF +K +K D I LQ
Sbjct: 505 NASPERLFKVVFVGDSGVGKSSFIHRFCNDSFKATFSATIGVDFQVKNLK-VDSHIIALQ 563
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 564 LWDTAGQ 570
>gi|380015232|ref|XP_003691611.1| PREDICTED: LOW QUALITY PROTEIN: phosphotriesterase-related
protein-like [Apis florea]
Length = 547
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K + W KI LQLWD+
Sbjct: 350 ELLFKFLVIGDYGVGKTALVRRYTEGKFTSNYKITIGADFAIKTLDWDPLTKINLQLWDV 409
Query: 128 AGQ 130
AG
Sbjct: 410 AGH 412
>gi|340373077|ref|XP_003385069.1| PREDICTED: ras-related protein Rab-32B-like isoform 2 [Amphimedon
queenslandica]
Length = 117
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+KV+V+G+ VGKTS ++RY F YK T+GVDFALK + W + KI +QLWDI
Sbjct: 16 EILYKVLVVGNFGVGKTSVIRRYTSGIFSPHYKLTIGVDFALKTLIWDEHTKINMQLWDI 75
Query: 128 AGQ 130
AG
Sbjct: 76 AGH 78
>gi|440803944|gb|ELR24827.1| Rasrelated protein Rab-32, putative [Acanthamoeba castellanii str.
Neff]
Length = 216
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++V+GD GKT+ ++R V+N F + YK T+GVDFALK ++ R I LQLWDI
Sbjct: 16 EYLYKILVVGDIGTGKTAIIRRCVENQFSESYKTTIGVDFALKTIQ-RSNATIHLQLWDI 74
Query: 128 AGQ 130
AGQ
Sbjct: 75 AGQ 77
>gi|443697719|gb|ELT98053.1| hypothetical protein CAPTEDRAFT_110893 [Capitella teleta]
Length = 186
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P E LFKV+VIG+ VGKTS ++RY + F YK T+GVDF++K + W + +QLW
Sbjct: 16 PKEYLFKVLVIGEFGVGKTSIIRRYTEGYFVPSYKMTIGVDFSMKSIPWNPMTHVNIQLW 75
Query: 126 DIAGQ 130
DIAG
Sbjct: 76 DIAGH 80
>gi|225719646|gb|ACO15669.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 60 RKSFNAPPE-KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
R S+ E +L+KV+VI D GK+++++RY + F +DY TVGVDF LK++
Sbjct: 6 RSSYGISSESRLYKVLVIRDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGL 65
Query: 119 KIKLQLWDIAGQ 130
+I+LQLWDIAGQ
Sbjct: 66 EIRLQLWDIAGQ 77
>gi|268534552|ref|XP_002632407.1| Hypothetical protein CBG00431 [Caenorhabditis briggsae]
Length = 391
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+ +GD VGKT F+ R+ N FK + T+GVDF +K +K + I +QLWD
Sbjct: 195 PDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIAPNRAIAMQLWD 254
Query: 127 IAGQ 130
AGQ
Sbjct: 255 TAGQ 258
>gi|110760060|ref|XP_001120743.1| PREDICTED: ras-related protein Rab-32-like [Apis mellifera]
Length = 218
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK +VIGD VGKT+ V+RY + F +YK T+G DFA+K + W KI LQLWD+
Sbjct: 21 ELLFKFLVIGDYGVGKTALVRRYTEGKFTSNYKITIGADFAIKTLDWDPLTKINLQLWDV 80
Query: 128 AGQ 130
AG
Sbjct: 81 AGH 83
>gi|387017936|gb|AFJ51086.1| ras-related protein Rab-3D-like [Crotalus adamanteus]
Length = 220
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F D+ TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSDFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|442749927|gb|JAA67123.1| Putative gtp-binding protein-like ras superfamily [Ixodes ricinus]
Length = 229
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+V+G+ VGKTS ++RY + F + YK T+GVDF+LK + + +++ I LQLWDIAG
Sbjct: 26 LFKVLVVGEFGVGKTSLIRRYTEGVFNQAYKITIGVDFSLKHIVYDNKKHITLQLWDIAG 85
Query: 130 Q 130
Sbjct: 86 H 86
>gi|427783513|gb|JAA57208.1| Putative rab gtpase [Rhipicephalus pulchellus]
Length = 225
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+VIGD VGKTS ++RY + F YK T+GVDF+LK + + + I LQLWDIAG
Sbjct: 25 LFKVLVIGDFGVGKTSLIRRYTEGVFNPAYKITIGVDFSLKHLVYNGNKHITLQLWDIAG 84
Query: 130 Q 130
Sbjct: 85 H 85
>gi|330792796|ref|XP_003284473.1| Rab GTPase [Dictyostelium purpureum]
gi|325085616|gb|EGC39020.1| Rab GTPase [Dictyostelium purpureum]
Length = 252
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ L+KV++IGD VGKTS ++RY F +YK T+GVDF++K ++W + + LQLWDI
Sbjct: 49 KHLYKVLLIGDYAVGKTSLIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKVVSLQLWDI 108
Query: 128 AGQ 130
AG
Sbjct: 109 AGH 111
>gi|308480912|ref|XP_003102662.1| hypothetical protein CRE_03222 [Caenorhabditis remanei]
gi|308261096|gb|EFP05049.1| hypothetical protein CRE_03222 [Caenorhabditis remanei]
Length = 71
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+KV+VIGDP VGKTS ++R+V N F +YK T+GVDFALKI+ + + LQ+WDI+
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDIS 69
>gi|308482528|ref|XP_003103467.1| hypothetical protein CRE_28753 [Caenorhabditis remanei]
gi|308259888|gb|EFP03841.1| hypothetical protein CRE_28753 [Caenorhabditis remanei]
Length = 391
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+ +GD VGKT F+ R+ N FK + T+GVDF +K +K + I +QLWD
Sbjct: 195 PDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWD 254
Query: 127 IAGQ 130
AGQ
Sbjct: 255 TAGQ 258
>gi|444732614|gb|ELW72899.1| Ras-related protein Rab-32 [Tupaia chinensis]
Length = 159
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
KV+VIG+ VGKTS ++RYV F + Y+ T+GVDFALK++ W + ++LQLWDIA
Sbjct: 19 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAA 76
>gi|392902352|ref|NP_001255966.1| Protein 4R79.2, isoform a [Caenorhabditis elegans]
gi|3873658|emb|CAA20282.1| Protein 4R79.2, isoform a [Caenorhabditis elegans]
Length = 395
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+ +GD VGKT F+ R+ N FK + T+GVDF +K +K + I +QLWD
Sbjct: 199 PDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWD 258
Query: 127 IAGQ 130
AGQ
Sbjct: 259 TAGQ 262
>gi|407853753|gb|EKG06607.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 243
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALK-IVKWRDQQKI 120
S++ E LFKV++IG+ GKT ++RYV F K T+GVDFALK +V + I
Sbjct: 2 SYSKSSELLFKVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAATNRNI 61
Query: 121 KLQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 62 TLQLWDIAGQ 71
>gi|399163175|gb|AFP33163.1| rab-44, partial [Caenorhabditis elegans]
Length = 394
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+ +GD VGKT F+ R+ N FK + T+GVDF +K +K + I +QLWD
Sbjct: 198 PDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWD 257
Query: 127 IAGQ 130
AGQ
Sbjct: 258 TAGQ 261
>gi|392902354|ref|NP_001255967.1| Protein 4R79.2, isoform b [Caenorhabditis elegans]
gi|290457484|emb|CBK19358.1| Protein 4R79.2, isoform b [Caenorhabditis elegans]
Length = 311
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+ +GD VGKT F+ R+ N FK + T+GVDF +K +K + I +QLWD
Sbjct: 115 PDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWD 174
Query: 127 IAGQ 130
AGQ
Sbjct: 175 TAGQ 178
>gi|71663090|ref|XP_818542.1| small GTP-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70883800|gb|EAN96691.1| small GTP-binding protein, putative [Trypanosoma cruzi]
Length = 243
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALK-IVKWRDQQKI 120
S++ E LFKV++IG+ GKT ++RYV F K T+GVDFALK +V + I
Sbjct: 2 SYSKSSELLFKVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAATNRNI 61
Query: 121 KLQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 62 TLQLWDIAGQ 71
>gi|341886032|gb|EGT41967.1| hypothetical protein CAEBREN_28112 [Caenorhabditis brenneri]
Length = 361
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+ +GD VGKT F+ R+ N FK + T+GVDF +K +K + I +QLWD
Sbjct: 165 PDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWD 224
Query: 127 IAGQ 130
AGQ
Sbjct: 225 TAGQ 228
>gi|291408137|ref|XP_002720314.1| PREDICTED: RAB38 [Oryctolagus cuniculus]
Length = 210
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E +++VIGD VGKTS ++RYV F Y+ T+GVDFALK++ W + ++LQLWDI
Sbjct: 7 EVAVQLLVIGDLGVGKTSIIKRYVHQNFSH-YRATIGVDFALKVLHWDPETVVRLQLWDI 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|407421093|gb|EKF38806.1| rab1 small GTP-binding protein, putative [Trypanosoma cruzi
marinkellei]
Length = 244
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALK-IVKWRDQQKI 120
S++ E LFKV++IG+ GKT ++RYV F K T+GVDFALK +V + I
Sbjct: 2 SYSKSSELLFKVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAATNRNI 61
Query: 121 KLQLWDIAGQ 130
LQLWDIAGQ
Sbjct: 62 TLQLWDIAGQ 71
>gi|348675957|gb|EGZ15775.1| hypothetical protein PHYSODRAFT_561505 [Phytophthora sojae]
Length = 218
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 61 KSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
+ NA + + KV+V+GD GKTS ++RYV + F + ++ T+GVDFALK V + +
Sbjct: 4 RRVNAAQDAVIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTV-NGTTV 62
Query: 121 KLQLWDIAGQ 130
+LQLWDIAGQ
Sbjct: 63 RLQLWDIAGQ 72
>gi|221111768|ref|XP_002162570.1| PREDICTED: ras-related protein Rab-3C-like [Hydra magnipapillata]
Length = 213
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 53 LVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIV 112
+ V S R E +FK+++IG+ +VGKT F+ RY +++F + TVG+DF +K V
Sbjct: 1 MAAVSSDRHCCKHTAEYIFKLLIIGNSSVGKTCFLFRYSEDSFTSGFVSTVGIDFKVKTV 60
Query: 113 KWRDQQKIKLQLWDIAGQ 130
+R+ ++IKLQ+WD AGQ
Sbjct: 61 -FRNDKQIKLQIWDTAGQ 77
>gi|324497947|gb|ADY39622.1| putative RAB GTPase [Hottentotta judaicus]
Length = 225
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 64/122 (52%), Gaps = 23/122 (18%)
Query: 11 LPSASEDPSIDNWDKASWENVTPIVSEQGDGEIIEIIDPSLKLVRVPSIRKSFNA--PPE 68
L SE+ S+ N KA +N P+VS+ I KS+ A PPE
Sbjct: 93 LKETSEEESL-NSKKAIEKNSDPVVSDD-------------------EISKSYEATGPPE 132
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+ +KV+ IGD VGK+SF+ R + F K T+GVDF +K ++ D + I LQLWD A
Sbjct: 133 RTYKVVFIGDAAVGKSSFILRLSKGVFVKHLNSTLGVDFQVKTLRI-DNKNIALQLWDTA 191
Query: 129 GQ 130
GQ
Sbjct: 192 GQ 193
>gi|154414735|ref|XP_001580394.1| Ras family protein [Trichomonas vaginalis G3]
gi|121914611|gb|EAY19408.1| Ras family protein [Trichomonas vaginalis G3]
Length = 215
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K+ KV+V+G+ GKTS +++YVQ F + YK T+GVDFA K ++W ++ I LQLWDIA
Sbjct: 13 KILKVLVVGEMGTGKTSLIRQYVQGFFSEFYKTTIGVDFATKEIEWDEKITISLQLWDIA 72
Query: 129 GQ 130
GQ
Sbjct: 73 GQ 74
>gi|428167843|gb|EKX36796.1| hypothetical protein GUITHDRAFT_175417 [Guillardia theta CCMP2712]
Length = 217
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 66 PP--EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
PP + FKV+V+GDP VGKTS + RYV +F YK T+GVDFALK++ R I+LQ
Sbjct: 11 PPRTDYAFKVLVVGDPRVGKTSIINRYVHGSFDIHYKLTLGVDFALKVIH-RPSSIIRLQ 69
Query: 124 LWDIAGQ 130
L DIAGQ
Sbjct: 70 LRDIAGQ 76
>gi|156398287|ref|XP_001638120.1| predicted protein [Nematostella vectensis]
gi|156225238|gb|EDO46057.1| predicted protein [Nematostella vectensis]
Length = 195
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKV+V+GD GK SFV+RYV N + YK T+GVDFALK ++W I+LQ+W IAGQ
Sbjct: 9 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQ 68
>gi|291225416|ref|XP_002732696.1| PREDICTED: RAS-associated protein RAB13-like [Saccoglossus
kowalevskii]
Length = 719
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
PE++FKV+ +GD VGK+SF+ R+ ++FK ++ T+GVDF +K V D + I LQLWD
Sbjct: 527 PERVFKVVFVGDSGVGKSSFIYRFCNDSFKSNFSATIGVDFQVKNV-IVDHKMIALQLWD 585
Query: 127 IAGQ 130
AGQ
Sbjct: 586 TAGQ 589
>gi|301122745|ref|XP_002909099.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099861|gb|EEY57913.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 61 KSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
+ NA + + KV+V+GD GKTS ++RYV + F + ++ T+GVDFALK V +
Sbjct: 4 RRVNAAQDAVIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTV-SGTTV 62
Query: 121 KLQLWDIAGQ 130
+LQLWDIAGQ
Sbjct: 63 RLQLWDIAGQ 72
>gi|348511151|ref|XP_003443108.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 222
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
+L + PS + + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K
Sbjct: 7 RLQQQPSQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 66
Query: 112 VKWRDQQKIKLQLWDIAGQ 130
V +R+ ++IKLQ+WD AGQ
Sbjct: 67 V-FRNDKRIKLQIWDTAGQ 84
>gi|66825191|ref|XP_645950.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897435|sp|Q55E31.1|RB32B_DICDI RecName: Full=Ras-related protein Rab-32B
gi|60474121|gb|EAL72058.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 260
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
L+KV++IGD VGK+S ++RY F +YK T+GVDF++K ++W + + LQLWDIA
Sbjct: 58 HLYKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKIVSLQLWDIA 117
Query: 129 GQ 130
G
Sbjct: 118 GH 119
>gi|403373426|gb|EJY86632.1| Rab GTPase 7 [Oxytricha trifallax]
Length = 234
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+ K++VIG+ GKTS V R+VQN F +YK TV DFA+KI+K D + I+LQLWD+ G
Sbjct: 1 MIKILVIGNSYSGKTSIVNRFVQNKFDTNYKATVACDFAMKILKIEDTE-IRLQLWDLVG 59
Query: 130 QN 131
Q+
Sbjct: 60 QD 61
>gi|114052040|ref|NP_001040211.1| Rab-related protein [Bombyx mori]
gi|87248399|gb|ABD36252.1| Rab-related protein [Bombyx mori]
Length = 231
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E L+K++VIG+ GKTS ++RYV F + Y+ T+GVDFALK++ I+ QLWDI
Sbjct: 22 EHLYKILVIGEWGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNGDSNTIIRWQLWDI 81
Query: 128 AGQ 130
AGQ
Sbjct: 82 AGQ 84
>gi|403413298|emb|CCL99998.1| predicted protein [Fibroporia radiculosa]
Length = 231
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
+ F++PP K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D +
Sbjct: 6 VSADFSSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLED-R 64
Query: 119 KIKLQLWDIAGQ 130
++LQLWD AGQ
Sbjct: 65 TVRLQLWDTAGQ 76
>gi|50540426|ref|NP_001002679.1| ras-related protein Rab-3B [Danio rerio]
gi|49899208|gb|AAH75784.1| Zgc:86892 [Danio rerio]
Length = 220
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
PS + + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+
Sbjct: 11 PSQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRN 69
Query: 117 QQKIKLQLWDIAGQ 130
++IKLQ+WD AGQ
Sbjct: 70 NKRIKLQIWDTAGQ 83
>gi|392567066|gb|EIW60241.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 214
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++PP K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 11 FSSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLED-RTVRL 69
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 70 QLWDTAGQ 77
>gi|395333800|gb|EJF66177.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 214
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++PP K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 11 FSSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLED-RTVRL 69
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 70 QLWDTAGQ 77
>gi|169806162|ref|XP_001827826.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
gi|161779274|gb|EDQ31297.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
Length = 200
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+I+IGD VGKT +QRY N + + ++ T+GVDF +K +K + +K+KLQ+WD AG
Sbjct: 8 LFKIILIGDSGVGKTCLLQRYTDNVYNESFQSTIGVDFKIKTIKL-NGKKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|38051907|gb|AAH60562.1| Rab3b protein [Rattus norvegicus]
Length = 228
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
IR + + + +FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++
Sbjct: 11 IRDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEK 69
Query: 119 KIKLQLWDIAGQ 130
++KLQ+WD AGQ
Sbjct: 70 RVKLQIWDTAGQ 81
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+IVIGD GK+S + R+ NT+ + Y T+GVDF +K VK D IKLQ+WD AG
Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKI-DNTTIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|13592037|ref|NP_112353.1| ras-related protein Rab-3B [Rattus norvegicus]
gi|6093900|sp|Q63941.2|RAB3B_RAT RecName: Full=Ras-related protein Rab-3B
gi|2251196|emb|CAA74341.1| Rab3B protein [Rattus norvegicus]
gi|149035702|gb|EDL90383.1| RAB3B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 219
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
IR + + + +FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++
Sbjct: 11 IRDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEK 69
Query: 119 KIKLQLWDIAGQ 130
++KLQ+WD AGQ
Sbjct: 70 RVKLQIWDTAGQ 81
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+IVIGD GK+S + R+ NT+ + Y T+GVDF +K VK D IKLQ+WD AG
Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKI-DNTTIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|156366235|ref|XP_001627045.1| predicted protein [Nematostella vectensis]
gi|156213942|gb|EDO34945.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 54 VRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVK 113
+R PS + F+ LFK+++IGDP VGKT VQR+ TF + T+GVDF ++ V+
Sbjct: 1 MREPSTEEFFDY----LFKIVLIGDPGVGKTCIVQRFRSGTFVERNGSTIGVDFTMRSVQ 56
Query: 114 WRDQQKIKLQLWDIAGQ 130
D +KIKLQ+WD AGQ
Sbjct: 57 V-DNKKIKLQIWDTAGQ 72
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 53 LVRVPSIRKSFNAPPEK----LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
+ R+PS N E+ LFK++VIGD +GKTS VQR+ F + Y T+GVDFA
Sbjct: 1 MSRLPS-----NTASEESFDFLFKIVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFA 55
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
+K + +Q +KLQ+WD AGQ
Sbjct: 56 MKTIVIEGKQ-VKLQIWDTAGQ 76
>gi|196008661|ref|XP_002114196.1| hypothetical protein TRIADDRAFT_58410 [Trichoplax adhaerens]
gi|190583215|gb|EDV23286.1| hypothetical protein TRIADDRAFT_58410 [Trichoplax adhaerens]
Length = 243
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E FK I++G GK+S ++RYV F YK T+GVDFALK++ W + IKLQLWD+
Sbjct: 38 EHSFKFIIVGKNHTGKSSIIRRYVDGLFTDYYKITMGVDFALKVINWDAKTTIKLQLWDV 97
Query: 128 AGQN 131
GQ+
Sbjct: 98 QGQD 101
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+IVIGD GK+S + R+ NT+ + Y T+GVDF +K VK D IKLQ+WD AG
Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKI-DNTTIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|242012932|ref|XP_002427179.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511462|gb|EEB14441.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 223
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 47 IDPSLKLVRVPSIR--KSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVG 104
+D S K + V R KS E + K++V+GD VGKT+ ++RYV+ F +YK T+G
Sbjct: 1 MDDSKKSINVEKARLKKSNFVLKEIMLKILVVGDYGVGKTAVIRRYVEGKFTSNYKVTIG 60
Query: 105 VDFALKIVKWRDQQKIKLQLWDIAGQ 130
DF++K + W ++ +QLWDIAG
Sbjct: 61 ADFSIKTMPWDSTTEVNIQLWDIAGN 86
>gi|318037484|ref|NP_001188027.1| ras-related protein rab-3d [Ictalurus punctatus]
gi|308324635|gb|ADO29452.1| ras-related protein rab-3d [Ictalurus punctatus]
Length = 223
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
+L++ P + + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K
Sbjct: 8 RLLQQPPQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 67
Query: 112 VKWRDQQKIKLQLWDIAGQ 130
V +R+ ++IKLQ+WD AGQ
Sbjct: 68 V-FRNNKRIKLQIWDTAGQ 85
>gi|299472101|emb|CBN77086.1| Rab32B, RAB family GTPase [Ectocarpus siliculosus]
Length = 570
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P KV+V+G+ GK+S + R+V N F DY TVG D+A+K V + ++++LQLWD
Sbjct: 348 PTVTCKVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAMKDVSLENGRQVRLQLWD 407
Query: 127 IAGQN 131
IAGQ+
Sbjct: 408 IAGQD 412
>gi|68534613|gb|AAH99268.1| RAB35 protein, partial [Xenopus laevis]
Length = 233
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P L V+V ++ + + + LFK+++IGD VGK+S + R+ NTF Y T+GVDF
Sbjct: 23 PGLPFVQVATMARDY----DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFK 78
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ V+ + +K+KLQ+WD AGQ
Sbjct: 79 IRTVEI-NGEKVKLQIWDTAGQ 99
>gi|126631404|gb|AAI33763.1| RAB35 protein [Xenopus laevis]
Length = 248
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P L V+V ++ + + + LFK+++IGD VGK+S + R+ NTF Y T+GVDF
Sbjct: 38 PGLPFVQVATMARDY----DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFK 93
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ V+ + +K+KLQ+WD AGQ
Sbjct: 94 IRTVEI-NGEKVKLQIWDTAGQ 114
>gi|46249671|gb|AAH68969.1| RAB35 protein, partial [Xenopus laevis]
Length = 231
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P L V+V ++ + + + LFK+++IGD VGK+S + R+ NTF Y T+GVDF
Sbjct: 21 PGLPFVQVATMARDY----DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFK 76
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ V+ + +K+KLQ+WD AGQ
Sbjct: 77 IRTVEI-NGEKVKLQIWDTAGQ 97
>gi|145515323|ref|XP_001443561.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834462|emb|CAI44553.1| rab_A59 [Paramecium tetraurelia]
gi|124410950|emb|CAK76164.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E++FK+++IG+ VGK+S + RY +TF+ Y T+GVDF K +K D Q IKLQ+WD
Sbjct: 2 EEQIFKIVIIGNSAVGKSSLLIRYCDDTFRDIYLSTIGVDFRFKTIKL-DGQGIKLQIWD 60
Query: 127 IAGQ 130
AGQ
Sbjct: 61 TAGQ 64
>gi|327264043|ref|XP_003216826.1| PREDICTED: ras-related protein Rab-3D-like [Anolis carolinensis]
Length = 220
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|145552226|ref|XP_001461789.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834332|emb|CAI44519.1| rab_B59 [Paramecium tetraurelia]
gi|124429625|emb|CAK94416.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E++FK+++IG+ VGK+S + RY +TF+ Y T+GVDF K +K D Q IKLQ+WD
Sbjct: 2 QEQIFKIVIIGNSAVGKSSLLIRYCDDTFRDIYLSTIGVDFRFKTIKL-DGQGIKLQIWD 60
Query: 127 IAGQ 130
AGQ
Sbjct: 61 TAGQ 64
>gi|407043786|gb|EKE42151.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 201
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KV+++G+ +VGKTS QRYV NTF+ Y +VGVDF K +K RD + I+LQ+WD AGQ
Sbjct: 13 KVLLLGESSVGKTSITQRYVDNTFEDIYLSSVGVDFKFKEIK-RDNELIRLQIWDTAGQ 70
>gi|395855070|ref|XP_003799994.1| PREDICTED: ras-related protein Rab-3B [Otolemur garnettii]
Length = 235
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|91084289|ref|XP_967046.1| PREDICTED: similar to ras-related protein Rab, putative [Tribolium
castaneum]
gi|270008813|gb|EFA05261.1| hypothetical protein TcasGA2_TC015416 [Tribolium castaneum]
Length = 201
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF +K V D QK+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIKTVSL-DGQKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|196049930|pdb|3DZ8|A Chain A, Crystal Structure Of Human Rab3b Gtpase Bound With Gdp
Length = 191
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F + +FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KL
Sbjct: 16 FQGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKL 74
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 75 QIWDTAGQ 82
>gi|27696356|gb|AAH43857.1| Rab3d protein, partial [Xenopus laevis]
Length = 246
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 51 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 109
Query: 130 Q 130
Q
Sbjct: 110 Q 110
>gi|147899840|ref|NP_001087991.1| RAB3D, member RAS oncogene family [Xenopus laevis]
gi|52139114|gb|AAH82662.1| LOC494677 protein [Xenopus laevis]
Length = 217
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|402225252|gb|EJU05313.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
SF+A P K K++++GD +VGKTS + R++ +TF + Y+ T+G+DF K + D + ++
Sbjct: 10 SFSALPLKRTKIVLLGDQSVGKTSLITRFMYDTFDQTYQATIGIDFLSKTMYLED-RTVR 68
Query: 122 LQLWDIAGQ 130
LQLWD AGQ
Sbjct: 69 LQLWDTAGQ 77
>gi|440294618|gb|ELP87618.1| hypothetical protein EIN_146120 [Entamoeba invadens IP1]
Length = 213
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 47 IDPSLKL-VRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGV 105
+D S K+ + + ++SF + LFK++VIG+ VGKT+ +QRY +NTF Y TVGV
Sbjct: 1 MDKSHKVHTKQMTAKRSF----DHLFKILVIGESGVGKTAIMQRYCENTFDPVYISTVGV 56
Query: 106 DFALKIVKWRDQQKIKLQLWDIAGQ 130
DF KIV D+ IK+QLWD AGQ
Sbjct: 57 DFNPKIVNCNDKV-IKMQLWDTAGQ 80
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+IVIGD GK+S + R+ NT+ + Y T+GVDF +K VK D IKLQ+WD AG
Sbjct: 7 LFKIIVIGDSGCGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKI-DNITIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|27469883|gb|AAH41759.1| RAB35 protein, partial [Xenopus laevis]
Length = 227
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P L V+V ++ + + + LFK+++IGD VGK+S + R+ NTF Y T+GVDF
Sbjct: 17 PGLPFVQVATMARDY----DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFK 72
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ V+ + +K+KLQ+WD AGQ
Sbjct: 73 IRTVEI-NGEKVKLQIWDTAGQ 93
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+V+ TFK D K T+GV+FA K V+ R+ + K Q+WD AG
Sbjct: 10 LFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|54020751|ref|NP_001005621.1| RAB3D, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257746|gb|AAH74589.1| RAB3D, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|118373959|ref|XP_001020172.1| Ras family protein [Tetrahymena thermophila]
gi|89301939|gb|EAR99927.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777836|dbj|BAJ21314.1| Rab-family small GTPase RabX16 [Tetrahymena thermophila]
Length = 234
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 63 FNAPPEKL---FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
FN+P K+ FK+I+IG VGK+S + +YV F + Y T+GVDF LK +K +
Sbjct: 18 FNSPHTKIDLVFKIILIGQQNVGKSSILNQYVDREFAEHYMSTIGVDFRLKTIKTSSGKI 77
Query: 120 IKLQLWDIAGQ 130
+KLQ+WD AGQ
Sbjct: 78 VKLQIWDTAGQ 88
>gi|334326343|ref|XP_001364610.2| PREDICTED: hypothetical protein LOC100011001 [Monodelphis
domestica]
Length = 510
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 313 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 371
Query: 130 Q 130
Q
Sbjct: 372 Q 372
>gi|76779772|gb|AAI06309.1| Rab3d protein [Xenopus laevis]
Length = 217
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|298713180|emb|CBJ26936.1| Rab32A, RAB family GTPase [Ectocarpus siliculosus]
Length = 276
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQN 131
KV+V+GDP GKTS ++RYV + F +K TVGVDFALK + D +KLQLWDIAGQ+
Sbjct: 81 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGD-TTVKLQLWDIAGQD 139
>gi|344278706|ref|XP_003411134.1| PREDICTED: ras-related protein Rab-3B-like [Loxodonta africana]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|550066|gb|AAA60243.1| GTP-binding protein [Homo sapiens]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLLRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|118094547|ref|XP_422470.2| PREDICTED: ras-related protein Rab-3C [Gallus gallus]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|291190367|ref|NP_001167363.1| ras-related protein Rab-3B [Salmo salar]
gi|223649442|gb|ACN11479.1| Ras-related protein Rab-3B [Salmo salar]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|395512525|ref|XP_003760488.1| PREDICTED: ras-related protein Rab-3D [Sarcophilus harrisii]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|126305656|ref|XP_001362429.1| PREDICTED: ras-related protein Rab-3B-like [Monodelphis domestica]
Length = 220
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|402585303|gb|EJW79243.1| hypothetical protein WUBG_09848, partial [Wuchereria bancrofti]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
PS+ +S + P+++FKV+ +GD VGKT F++R+ N FK + T+GVDF +K ++ +
Sbjct: 50 PSMPRS-DFLPDRIFKVVFVGDSAVGKTCFLRRFCHNRFKLLFNATIGVDFTVKTIRLCN 108
Query: 117 QQKIKLQLWDIAGQ 130
+ + +QLWD AGQ
Sbjct: 109 RV-VAIQLWDTAGQ 121
>gi|448523590|ref|XP_003868901.1| Ypt72 GTPase [Candida orthopsilosis Co 90-125]
gi|380353241|emb|CCG25997.1| Ypt72 GTPase [Candida orthopsilosis]
Length = 211
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P+KL K+IV+GD VGKTS + ++V N F + YK T+G DF K + + + LQ+W
Sbjct: 2 SPKKLLKIIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKTVTLQIW 61
Query: 126 DIAGQ 130
D AGQ
Sbjct: 62 DTAGQ 66
>gi|395513171|ref|XP_003760803.1| PREDICTED: ras-related protein Rab-3A [Sarcophilus harrisii]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R++++IKLQ+WD AG
Sbjct: 161 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNEKRIKLQIWDTAG 219
Query: 130 Q 130
Q
Sbjct: 220 Q 220
>gi|241077|gb|AAB20687.1| synaptic vesicle specific GTP-binding protein [Discopyge ommata]
Length = 218
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|431896886|gb|ELK06150.1| Ras-related protein Rab-3B [Pteropus alecto]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|47212450|emb|CAF94102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ ++IKLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTV-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|301759907|ref|XP_002915768.1| PREDICTED: ras-related protein Rab-3B-like [Ailuropoda melanoleuca]
gi|281353546|gb|EFB29130.1| hypothetical protein PANDA_003782 [Ailuropoda melanoleuca]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|426215520|ref|XP_004002020.1| PREDICTED: ras-related protein Rab-3B [Ovis aries]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|154147666|ref|NP_001093746.1| RAB3B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023761|gb|AAI35349.1| rab3b protein [Xenopus (Silurana) tropicalis]
Length = 217
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|148234577|ref|NP_001086320.1| RAB3B, member RAS oncogene family [Xenopus laevis]
gi|49256375|gb|AAH74481.1| MGC84786 protein [Xenopus laevis]
Length = 217
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|291398900|ref|XP_002715144.1| PREDICTED: RAB3B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|355558002|gb|EHH14782.1| hypothetical protein EGK_00759 [Macaca mulatta]
gi|380787191|gb|AFE65471.1| ras-related protein Rab-3B [Macaca mulatta]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|443914817|gb|ELU36556.1| ryh1 [Rhizoctonia solani AG-1 IA]
Length = 189
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F + P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + + D + ++L
Sbjct: 10 FTSAPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTM-YLDDRTVRL 68
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 69 QLWDTAGQ 76
>gi|296207942|ref|XP_002750863.1| PREDICTED: ras-related protein Rab-3B [Callithrix jacchus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|148698775|gb|EDL30722.1| RAB3B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 225
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|444724879|gb|ELW65466.1| Ras-related protein Rab-3B [Tupaia chinensis]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|440906879|gb|ELR57095.1| Ras-related protein Rab-3B, partial [Bos grunniens mutus]
Length = 225
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|73976938|ref|XP_849630.1| PREDICTED: ras-related protein Rab-3B isoform 1 [Canis lupus
familiaris]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|338721709|ref|XP_001493964.2| PREDICTED: ras-related protein Rab-3B-like [Equus caballus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|158256738|dbj|BAF84342.1| unnamed protein product [Homo sapiens]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|354548148|emb|CCE44884.1| hypothetical protein CPAR2_406870 [Candida parapsilosis]
Length = 210
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
KL KVIV+GD VGKTS + ++V N F + YK T+G DF K + +K+ LQ+WD A
Sbjct: 4 KLLKVIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKKVTLQIWDTA 63
Query: 129 GQ 130
GQ
Sbjct: 64 GQ 65
>gi|354468180|ref|XP_003496545.1| PREDICTED: ras-related protein Rab-3B-like [Cricetulus griseus]
gi|81870701|sp|Q5KTJ7.1|RAB3B_MESAU RecName: Full=Ras-related protein Rab-3B
gi|57157443|dbj|BAD83699.1| Rab3B [Mesocricetus auratus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|19923750|ref|NP_002858.2| ras-related protein Rab-3B [Homo sapiens]
gi|38258903|sp|P20337.2|RAB3B_HUMAN RecName: Full=Ras-related protein Rab-3B
gi|20379040|gb|AAM21080.1|AF498932_1 small GTP binding protein RAB3B [Homo sapiens]
gi|13477155|gb|AAH05035.1| RAB3B, member RAS oncogene family [Homo sapiens]
gi|119627207|gb|EAX06802.1| RAB3B, member RAS oncogene family [Homo sapiens]
gi|312152638|gb|ADQ32831.1| RAB3B, member RAS oncogene family [synthetic construct]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|440294326|gb|ELP87343.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K+IVIG+P+VGKTS +++Y F + Y+ T+GVDFA+K K D++ ++L+LWDIAGQ
Sbjct: 10 LKIIVIGEPSVGKTSTIKKYCHGVFDQLYRATIGVDFAVKFEKVDDKE-VELRLWDIAGQ 68
>gi|388452940|ref|NP_001253721.1| ras-related protein Rab-3B [Macaca mulatta]
gi|114556592|ref|XP_001143400.1| PREDICTED: ras-related protein Rab-3B [Pan troglodytes]
gi|332219762|ref|XP_003259028.1| PREDICTED: ras-related protein Rab-3B [Nomascus leucogenys]
gi|397518878|ref|XP_003829603.1| PREDICTED: ras-related protein Rab-3B [Pan paniscus]
gi|426329634|ref|XP_004025842.1| PREDICTED: ras-related protein Rab-3B [Gorilla gorilla gorilla]
gi|387542674|gb|AFJ71964.1| ras-related protein Rab-3B [Macaca mulatta]
gi|410207396|gb|JAA00917.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410251308|gb|JAA13621.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410298026|gb|JAA27613.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410329635|gb|JAA33764.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410329637|gb|JAA33765.1| RAB3B, member RAS oncogene family [Pan troglodytes]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|12963723|ref|NP_076026.1| ras-related protein Rab-3B [Mus musculus]
gi|38258239|sp|Q9CZT8.1|RAB3B_MOUSE RecName: Full=Ras-related protein Rab-3B
gi|12597435|gb|AAG60046.1|AF312036_1 small GTP binding protein Rab3B [Mus musculus]
gi|12848741|dbj|BAB28071.1| unnamed protein product [Mus musculus]
gi|26350141|dbj|BAC38710.1| unnamed protein product [Mus musculus]
gi|34980993|gb|AAH57173.1| RAB3B, member RAS oncogene family [Mus musculus]
gi|56078684|gb|AAH51918.2| RAB3B, member RAS oncogene family [Mus musculus]
gi|112292945|dbj|BAF02850.1| Rab3B [Mus musculus]
gi|148698774|gb|EDL30721.1| RAB3B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|27806113|ref|NP_776872.1| ras-related protein Rab-3B [Bos taurus]
gi|129324|sp|P10948.1|RAB3B_BOVIN RecName: Full=Ras-related protein Rab-3B; AltName: Full=SMG P25B
gi|162762|gb|AAA30417.1| GTP-binding protein [Bos taurus]
gi|113912049|gb|AAI22724.1| RAB3B, member RAS oncogene family [Bos taurus]
gi|296489056|tpg|DAA31169.1| TPA: ras-related protein Rab-3B [Bos taurus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|410967277|ref|XP_003990147.1| PREDICTED: ras-related protein Rab-3B [Felis catus]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|432853436|ref|XP_004067706.1| PREDICTED: ras-related protein Rab-3B-like [Oryzias latipes]
Length = 217
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ ++IKLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTV-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|149519974|ref|XP_001506603.1| PREDICTED: ras-related protein Rab-3C-like [Ornithorhynchus
anatinus]
Length = 116
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDT 78
Query: 128 AGQ 130
AGQ
Sbjct: 79 AGQ 81
>gi|348527766|ref|XP_003451390.1| PREDICTED: ras-related protein Rab-3B-like [Oreochromis niloticus]
Length = 218
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ ++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFSNSFVSTVGIDFKVKTV-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|346468105|gb|AEO33897.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S N + LFK+++IGD VGKT V+R+ ++TF YK TVGVDF +K + + IK
Sbjct: 3 SANEEYDYLFKIVLIGDAGVGKTCLVRRFAEDTFTSGYKLTVGVDFKIKTIDLHGKT-IK 61
Query: 122 LQLWDIAGQ 130
LQ+WD AG+
Sbjct: 62 LQIWDTAGE 70
>gi|297664935|ref|XP_002810871.1| PREDICTED: ras-related protein Rab-3B [Pongo abelii]
Length = 219
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|348520842|ref|XP_003447936.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 221
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 51 LKLVRVPSIRKSFNAPPEK----LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVD 106
+ L R P P ++ +FK+++IG+ +VGKTSF+ RY ++F + TVG+D
Sbjct: 1 MALARDPGAAHEQRDPADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGID 60
Query: 107 FALKIVKWRDQQKIKLQLWDIAGQ 130
F +K + +R+ +++KLQ+WD AGQ
Sbjct: 61 FKVKTI-YRNNKRVKLQIWDTAGQ 83
>gi|126323469|ref|XP_001362786.1| PREDICTED: ras-related protein Rab-3A-like [Monodelphis domestica]
Length = 220
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R++++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|403258075|ref|XP_003921608.1| PREDICTED: ras-related protein Rab-3B isoform 1 [Saimiri
boliviensis boliviensis]
gi|403258077|ref|XP_003921609.1| PREDICTED: ras-related protein Rab-3B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 219
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRQEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|124088024|ref|XP_001346935.1| Ras-related RAB [Paramecium tetraurelia strain d4-2]
gi|145474741|ref|XP_001423393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057324|emb|CAH03308.1| Ras-related RAB, putative [Paramecium tetraurelia]
gi|74831386|emb|CAI39294.1| rab_C65 [Paramecium tetraurelia]
gi|124390453|emb|CAK55995.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
SFN L KVIVIGD VGKT+ + R+V +TF D K T+GV F K++ +++ IK
Sbjct: 4 SFNY----LLKVIVIGDSGVGKTNLLLRFVNHTFSNDLKSTIGVQFFTKVISIKNEH-IK 58
Query: 122 LQLWDIAGQ 130
LQLWD AGQ
Sbjct: 59 LQLWDTAGQ 67
>gi|50540122|ref|NP_001002530.1| ras-related protein Rab-3C [Danio rerio]
gi|49900849|gb|AAH76367.1| RAB3C, member RAS oncogene family [Danio rerio]
gi|182889398|gb|AAI65042.1| Rab3c protein [Danio rerio]
Length = 218
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +++ ++IKLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|311259329|ref|XP_003128025.1| PREDICTED: ras-related protein Rab-3B-like [Sus scrofa]
Length = 219
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRQEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|268577759|ref|XP_002643862.1| Hypothetical protein CBG02097 [Caenorhabditis briggsae]
Length = 223
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+P S+N LFK++V+GD GK+ + R+ +N F+ D+ T+GVDF LK +K
Sbjct: 1 IPEASMSYN----HLFKIVVVGDHNCGKSCILLRFAENNFRMDHISTLGVDFKLKTIKL- 55
Query: 116 DQQKIKLQLWDIAG 129
+ KI+L+LWD AG
Sbjct: 56 GRDKIRLELWDTAG 69
>gi|351697769|gb|EHB00688.1| Ras-related protein Rab-3B [Heterocephalus glaber]
Length = 219
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRQEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|224058186|ref|XP_002197150.1| PREDICTED: ras-related protein Rab-3B [Taeniopygia guttata]
Length = 219
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|449268202|gb|EMC79072.1| Ras-related protein Rab-3B [Columba livia]
Length = 219
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|7689363|gb|AAF67748.1| GTP-binding protein RAB3A [Homo sapiens]
Length = 220
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ +KIKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKKIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|156392743|ref|XP_001636207.1| predicted protein [Nematostella vectensis]
gi|156223308|gb|EDO44144.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K+ K IV+GD VGKTS + R+ +N F DYK T+GVDF ++ K DQ+ +Q+WD A
Sbjct: 32 KICKAIVLGDVAVGKTSLINRFCRNAFDHDYKATIGVDFEVERFKILDQE-FNMQIWDTA 90
Query: 129 GQ 130
GQ
Sbjct: 91 GQ 92
>gi|339237673|ref|XP_003380391.1| EF hand domain containing protein [Trichinella spiralis]
gi|316976771|gb|EFV59993.1| EF hand domain containing protein [Trichinella spiralis]
Length = 487
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P+++FKV+V GD VGKT F+ R N F + T+G+DF +KI+K DQ I LQLWD
Sbjct: 365 PDRVFKVVVAGDSGVGKTCFLDRLCNNRFNPGIRSTIGIDFHMKILKVEDQL-IALQLWD 423
Query: 127 IAGQ 130
AGQ
Sbjct: 424 TAGQ 427
>gi|170588705|ref|XP_001899114.1| Ras family protein [Brugia malayi]
gi|158593327|gb|EDP31922.1| Ras family protein [Brugia malayi]
Length = 346
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 11/99 (11%)
Query: 33 PIVSEQGDGEIIEIIDPSLKLVRVPSI-RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYV 91
P+ E + II ++P PS+ R F P+++FKV+ +GD VGKT F+ R+
Sbjct: 147 PLADELRECGIINKVEP-------PSMPRPDF--LPDRIFKVVFLGDSAVGKTCFLSRFC 197
Query: 92 QNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
N FK + T+GVDF +K ++ + + + +QLWD AGQ
Sbjct: 198 HNRFKLLFNATIGVDFTVKTIRLCN-RVVAVQLWDTAGQ 235
>gi|299753222|ref|XP_001833137.2| ryh1 [Coprinopsis cinerea okayama7#130]
gi|298410200|gb|EAU88826.2| ryh1 [Coprinopsis cinerea okayama7#130]
Length = 214
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 13 FSSAPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 71
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 72 QLWDTAGQ 79
>gi|402854554|ref|XP_003891930.1| PREDICTED: ras-related protein Rab-3B [Papio anubis]
Length = 183
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|326925412|ref|XP_003208909.1| PREDICTED: ras-related protein Rab-3B-like [Meleagris gallopavo]
Length = 219
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|407852049|gb|EKG05716.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi]
Length = 229
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 62 SFNAPPEKL---FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
S ++ PE +K+IV+G+ TVGKTS ++RY ++ F + YK T+GVDF K V+ Q
Sbjct: 3 SGSSAPEDTEPEYKIIVVGNGTVGKTSLIRRYCEDGFGQGYKQTIGVDFYSKKVEIPGSQ 62
Query: 119 KIKLQLWDIAGQ 130
+ LQ+WDI GQ
Sbjct: 63 AVSLQIWDIGGQ 74
>gi|431922009|gb|ELK19182.1| cAMP-specific 3',5'-cyclic phosphodiesterase 4C [Pteropus alecto]
Length = 900
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 702 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 760
Query: 130 Q 130
Q
Sbjct: 761 Q 761
>gi|327271153|ref|XP_003220352.1| PREDICTED: ras-related protein Rab-3B-like [Anolis carolinensis]
Length = 219
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IG+ VGK+ + RY +NTF +++ T+GVDF +K + + +Q IKLQ+WD
Sbjct: 14 DHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQ-IKLQIWDT 72
Query: 128 AGQN 131
AGQ+
Sbjct: 73 AGQD 76
>gi|51010929|ref|NP_001003419.1| ras-related protein Rab-3C [Danio rerio]
gi|50370044|gb|AAH75980.1| RAB3A, member RAS oncogene family [Danio rerio]
Length = 220
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FKV++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 12 FSSAPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|224496098|ref|NP_001139069.1| RAB3D, member RAS oncogene family, a [Danio rerio]
Length = 223
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 25 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 83
Query: 130 Q 130
Q
Sbjct: 84 Q 84
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
+L + S + + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K
Sbjct: 7 RLQQQSSQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 66
Query: 112 VKWRDQQKIKLQLWDIAGQ 130
V +R+ ++IKLQ+WD AGQ
Sbjct: 67 V-FRNDKRIKLQIWDTAGQ 84
>gi|290981764|ref|XP_002673601.1| rab family small GTPase [Naegleria gruberi]
gi|284087186|gb|EFC40857.1| rab family small GTPase [Naegleria gruberi]
Length = 206
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
FK+IVIGD +VGKTSFV R+ + FK+ Y ++GVDF K V+ D +KLQ+WD +
Sbjct: 15 FKIIVIGDVSVGKTSFVSRFCEGEFKESYPSSIGVDFKSKEVRTNDNSNVKLQIWDFSA 73
>gi|156392741|ref|XP_001636206.1| predicted protein [Nematostella vectensis]
gi|156223307|gb|EDO44143.1| predicted protein [Nematostella vectensis]
Length = 121
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K+ K IV+GD VGKTS + R+ +N F DYK T+GVDF ++ K DQ+ +Q+WD A
Sbjct: 32 KICKAIVLGDVAVGKTSLINRFCRNAFDHDYKATIGVDFEVERFKILDQE-FNMQIWDTA 90
Query: 129 GQ 130
GQ
Sbjct: 91 GQ 92
>gi|344241825|gb|EGV97928.1| Ras-related protein Rab-3B [Cricetulus griseus]
Length = 133
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 128 AGQ 130
AGQ
Sbjct: 79 AGQ 81
>gi|167388366|ref|XP_001738539.1| rab17 [Entamoeba dispar SAW760]
gi|165898208|gb|EDR25141.1| rab17, putative [Entamoeba dispar SAW760]
Length = 209
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K+IVIG+P+VGKTS +++Y F + Y+ T+GVDFA+K D++ ++L+LWDIAGQ
Sbjct: 10 LKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTV-DERDVELRLWDIAGQ 68
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D+ ++L
Sbjct: 12 FSSSPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRT-VRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|238231785|ref|NP_001154079.1| ras-related protein Rab-3C [Oncorhynchus mykiss]
gi|225703896|gb|ACO07794.1| Ras-related protein Rab-3A [Oncorhynchus mykiss]
Length = 136
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
+L + P+ + + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K
Sbjct: 8 RLQQQPAQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKT 67
Query: 112 VKWRDQQKIKLQLWDIAGQ 130
V +R++++IKLQ+WD AGQ
Sbjct: 68 V-FRNEKRIKLQIWDTAGQ 85
>gi|407041312|gb|EKE40659.1| Rab family GTPase, partial [Entamoeba nuttalli P19]
Length = 208
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K+IVIG+P+VGKTS +++Y F + Y+ T+GVDFA+K D++ ++L+LWDIAGQ
Sbjct: 9 LKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTV-DERDVELRLWDIAGQ 67
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 13 FSSAPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 71
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 72 QLWDTAGQ 79
>gi|67481145|ref|XP_655922.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56473090|gb|EAL50536.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790126|dbj|BAD82859.1| small GTPase EhRabX11 [Entamoeba histolytica]
Length = 209
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K+IVIG+P+VGKTS +++Y F + Y+ T+GVDFA+K D++ ++L+LWDIAGQ
Sbjct: 10 LKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTV-DERDVELRLWDIAGQ 68
>gi|429965619|gb|ELA47616.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 199
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IG+ VGKTS + RYV T+ K+Y T+GVDF +K + R + +KLQ+WD AG
Sbjct: 7 LFKTILIGNSGVGKTSIINRYVDETYTKNYISTIGVDFKIKTI-VRHGKTVKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P KVI +GD +VGKTS + R++ F Y+ T+G+DF K++ D + IKLQLWD
Sbjct: 15 PISSHKVIFLGDQSVGKTSIITRFLYGAFDTHYQATIGIDFVAKVITLDDGRMIKLQLWD 74
Query: 127 IAGQ 130
AGQ
Sbjct: 75 TAGQ 78
>gi|348554601|ref|XP_003463114.1| PREDICTED: ras-related protein Rab-3B-like [Cavia porcellus]
Length = 219
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFIPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|412985742|emb|CCO16942.1| unknown [Bathycoccus prasinos]
Length = 206
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
+A L K+I++GD VGKTS + +YV F K YK T+G DF K VK D+ + +
Sbjct: 1 MSARKRTLLKLIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVKIDDENLVTM 60
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 61 QIWDTAGQ 68
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 12 FSSSPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|149394773|gb|ABR27273.1| Rab A61 [Nyctotherus ovalis]
Length = 206
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 64 NAPPEK--LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
NA PE LFK+++IG+ VGK+ + RY +NTF +++ T+GVDF +K D + IK
Sbjct: 4 NATPEYNLLFKLLLIGNSGVGKSCLLMRYAENTFTENFFNTIGVDFKIKTTTL-DSKIIK 62
Query: 122 LQLWDIAGQ 130
LQ+WD AGQ
Sbjct: 63 LQIWDTAGQ 71
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ +++ +FN + +FKV++IGD VGK+ + R+ +N F D K T+GV+F K +
Sbjct: 1 MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNI- 59
Query: 116 DQQKIKLQLWDIAGQ 130
DQ+ IK Q+WD AGQ
Sbjct: 60 DQKAIKAQIWDTAGQ 74
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+ + R+ +NT+ +DY T+GVDF ++ ++ D + IKL
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFAENTYTQDYISTIGVDFKIRTIEL-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|392595561|gb|EIW84884.1| GTP binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 214
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 12 FSSTPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|344234626|gb|EGV66494.1| hypothetical protein CANTEDRAFT_101058 [Candida tenuis ATCC 10573]
Length = 215
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + +++ LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDITLDNNKQVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|71665398|ref|XP_819669.1| small GTP-binding protein Rab28 [Trypanosoma cruzi strain CL
Brener]
gi|70884981|gb|EAN97818.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi]
Length = 229
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 62 SFNAPPEKL---FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
S ++ PE +K+IV+G+ TVGKTS ++RY ++ F + YK T+GVDF K V+ Q
Sbjct: 3 SGSSAPEDTEPEYKIIVVGNGTVGKTSLIRRYCEDGFGQGYKQTIGVDFYSKKVEIPGSQ 62
Query: 119 KIKLQLWDIAGQ 130
+ LQ+WDI GQ
Sbjct: 63 AVSLQIWDIGGQ 74
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ +++ +FN + +FKV++IGD VGK+ + R+ +N F D K T+GV+F K +
Sbjct: 1 MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNI- 59
Query: 116 DQQKIKLQLWDIAGQ 130
DQ+ IK Q+WD AGQ
Sbjct: 60 DQKAIKAQIWDTAGQ 74
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 12 FSSSPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|145480357|ref|XP_001426201.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834305|emb|CAI44511.1| rab_C17 [Paramecium tetraurelia]
gi|124393274|emb|CAK58803.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ S+ K P E+L KV+++G+ VGKT + RY N FK Y T+GVDF +K ++
Sbjct: 1 MSSLVKKAQDPYEQLMKVLLLGNSGVGKTQILLRYCDNNFKTGYMCTIGVDFKIKKLQV- 59
Query: 116 DQQKIKLQLWDIAGQ 130
D++ +K+Q+WD AGQ
Sbjct: 60 DEKNVKMQIWDTAGQ 74
>gi|336367247|gb|EGN95592.1| hypothetical protein SERLA73DRAFT_186692 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379967|gb|EGO21121.1| hypothetical protein SERLADRAFT_475872 [Serpula lacrymans var.
lacrymans S7.9]
Length = 214
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 12 FSSTPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|307176945|gb|EFN66251.1| Ras-related protein Rab-3 [Camponotus floridanus]
Length = 258
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 43 IIEIIDPSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGT 102
I+EI + R + + + +FK+++IG+ +VGKTSF+ RY ++F + T
Sbjct: 29 IVEITSQKNNTMARQDGRDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVST 88
Query: 103 VGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
VG+DF +K V +R +++KLQ+WD AGQ
Sbjct: 89 VGIDFKVKTV-FRHDKRVKLQIWDTAGQ 115
>gi|67484242|ref|XP_657341.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56474592|gb|EAL51955.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790156|dbj|BAD82874.1| small GTPase EhRabX26 [Entamoeba histolytica]
gi|449702814|gb|EMD43379.1| small GTPase EhRabX26, putative [Entamoeba histolytica KU27]
Length = 201
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KV+++G+ +VGKTS QRYV N F+ Y +VGVDF K +K RD + I+LQ+WD AGQ
Sbjct: 13 KVLLLGESSVGKTSITQRYVDNMFEDIYLSSVGVDFKFKEIK-RDNELIRLQIWDTAGQ 70
>gi|426228772|ref|XP_004008470.1| PREDICTED: ras-related protein Rab-3A [Ovis aries]
Length = 220
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|190348567|gb|EDK41039.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + +++ LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|162760|gb|AAA30416.1| GTP-binding protein [Bos taurus]
Length = 220
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|150866330|ref|XP_001385886.2| hypothetical protein PICST_61694 [Scheffersomyces stipitis CBS
6054]
gi|149387586|gb|ABN67857.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 224
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + D + I+LQLWD AGQ
Sbjct: 22 YKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLDDNRTIRLQLWDTAGQ 81
>gi|62955495|ref|NP_001017761.1| ras-related protein Rab-3A [Danio rerio]
gi|62203410|gb|AAH93355.1| Si:ch211-255d18.4 [Danio rerio]
gi|182890120|gb|AAI64318.1| Si:ch211-255d18.4 protein [Danio rerio]
Length = 220
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|291415916|ref|XP_002724195.1| PREDICTED: RAB3D, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 217
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|388583972|gb|EIM24273.1| GTP-binding protein ryh1 [Wallemia sebi CBS 633.66]
Length = 208
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ P K FK++ +G+ +VGKTS + R++ +TF K Y+ T+G+DF K + + D + I+LQL
Sbjct: 13 SQPLKKFKLVFLGEQSVGKTSLITRFMYDTFDKTYQATIGIDFLSKTM-YLDDRTIRLQL 71
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 72 WDTAGQ 77
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F++ P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 9 FSSSPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 67
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 68 QLWDTAGQ 75
>gi|47216418|emb|CAG01969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPTFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|417408831|gb|JAA50951.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 30 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|348523125|ref|XP_003449074.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|431918954|gb|ELK17821.1| Ras-related protein Rab-3D [Pteropus alecto]
Length = 219
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+P R + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R
Sbjct: 8 LPGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YR 66
Query: 116 DQQKIKLQLWDIAGQ 130
++IKLQ+WD AGQ
Sbjct: 67 HDKRIKLQIWDTAGQ 81
>gi|224090593|ref|XP_002187909.1| PREDICTED: ras-related protein Rab-3C [Taeniopygia guttata]
Length = 227
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|146414423|ref|XP_001483182.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + +++ LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|62858351|ref|NP_001016426.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273837|emb|CAJ83688.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273838|emb|CAJ83689.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134024095|gb|AAI35627.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 220
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|397514337|ref|XP_003827446.1| PREDICTED: ras-related protein Rab-3C [Pan paniscus]
Length = 227
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|348558673|ref|XP_003465141.1| PREDICTED: ras-related protein Rab-3A [Cavia porcellus]
Length = 220
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736318|gb|AAX97488.1| small Rab GTPase RabX11 [Trichomonas vaginalis]
gi|121905849|gb|EAY10770.1| Ras family protein [Trichomonas vaginalis G3]
Length = 210
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
+K++K+IV+GD GKTS ++R+V+ F + YK T+GVDFA KI+ D K +QLWD
Sbjct: 10 AQKVYKIIVVGDMGTGKTSMIRRFVEGNFSEFYKITIGVDFANKIIT-ADGVKCDIQLWD 68
Query: 127 IAGQ 130
IAGQ
Sbjct: 69 IAGQ 72
>gi|67474266|ref|XP_652882.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469780|gb|EAL47496.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790062|dbj|BAD82827.1| small GTPase EhRabC7 [Entamoeba histolytica]
gi|449709492|gb|EMD48750.1| small GTPase EhRabC7, putative [Entamoeba histolytica KU27]
Length = 195
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKV+VIG+ +VGKT+ ++R+ +N FK DY T+G+DF K + + Q IKL++WD AGQ
Sbjct: 8 FKVLVIGESSVGKTAIMERFCENQFKGDYMSTIGMDFNTKTISV-NGQTIKLKIWDTAGQ 66
>gi|432911772|ref|XP_004078715.1| PREDICTED: ras-related protein Rab-3A-like [Oryzias latipes]
Length = 218
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|320167999|gb|EFW44898.1| hypothetical protein CAOG_02904 [Capsaspora owczarzaki ATCC 30864]
Length = 225
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
++LFK+IVIGD TS ++RY + F +YK T+G DFA K+++W KI LQLWDI
Sbjct: 10 DQLFKIIVIGDYA---TSLIRRYSEGFFTPNYKLTIGADFATKVLEWESGAKITLQLWDI 66
Query: 128 AGQ 130
AG
Sbjct: 67 AGH 69
>gi|147901693|ref|NP_001088531.1| RAB3A, member RAS oncogene family [Xenopus laevis]
gi|54311426|gb|AAH84880.1| Rab3a-prov protein [Xenopus laevis]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|19923985|ref|NP_612462.1| ras-related protein Rab-3C [Homo sapiens]
gi|388452650|ref|NP_001252924.1| ras-related protein Rab-3C [Macaca mulatta]
gi|297675313|ref|XP_002815628.1| PREDICTED: ras-related protein Rab-3C isoform 2 [Pongo abelii]
gi|332233625|ref|XP_003266004.1| PREDICTED: ras-related protein Rab-3C [Nomascus leucogenys]
gi|332821437|ref|XP_526915.3| PREDICTED: ras-related protein Rab-3C isoform 2 [Pan troglodytes]
gi|402871610|ref|XP_003899749.1| PREDICTED: ras-related protein Rab-3C [Papio anubis]
gi|23396832|sp|Q96E17.1|RAB3C_HUMAN RecName: Full=Ras-related protein Rab-3C
gi|15278255|gb|AAH13033.1| RAB3C, member RAS oncogene family [Homo sapiens]
gi|19067861|gb|AAK08968.1| Rab3c [Homo sapiens]
gi|119575373|gb|EAW54978.1| RAB3C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|355691328|gb|EHH26513.1| Ras-related protein Rab-3C [Macaca mulatta]
gi|355749935|gb|EHH54273.1| Ras-related protein Rab-3C [Macaca fascicularis]
gi|380809404|gb|AFE76577.1| ras-related protein Rab-3C [Macaca mulatta]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|167377226|ref|XP_001734323.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904237|gb|EDR29537.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 195
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKV+VIG+ +VGKT+ ++R+ +N FK DY T+G+DF K + + Q IKL++WD AGQ
Sbjct: 8 FKVLVIGESSVGKTAIMERFCENQFKGDYMSTIGMDFNTKTISV-NGQSIKLKIWDTAGQ 66
>gi|149428156|ref|XP_001511148.1| PREDICTED: ras-related protein Rab-3A, partial [Ornithorhynchus
anatinus]
Length = 223
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 25 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 83
Query: 130 Q 130
Q
Sbjct: 84 Q 84
>gi|145541710|ref|XP_001456543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424355|emb|CAK89146.1| unnamed protein product [Paramecium tetraurelia]
Length = 359
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 65 APPEK--LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
+ P+K LFK I+IGD VGK+ + RY+++ F +Y T+GV+F K+V + K+KL
Sbjct: 143 SSPDKSPLFKFIIIGDAGVGKSCLLMRYMKDDFTTEYNVTIGVEFLSKVVNINEDTKVKL 202
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 203 QIWDTAGQ 210
>gi|28875789|ref|NP_789862.1| ras-related protein Rab-3C [Bos taurus]
gi|162764|gb|AAA30418.1| GTP-binding protein [Bos taurus]
Length = 218
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|348500494|ref|XP_003437808.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+ + R+ NT+ +DY T+GVDF ++ ++ D + IKL
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIEL-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|6679593|ref|NP_033027.1| ras-related protein Rab-3A [Mus musculus]
gi|61098195|ref|NP_037150.2| ras-related protein Rab-3A [Rattus norvegicus]
gi|178056554|ref|NP_001116651.1| ras-related protein Rab-3A [Sus scrofa]
gi|187936991|ref|NP_001120756.1| ras-related protein Rab-3A [Ovis aries]
gi|261862303|ref|NP_001159871.1| ras-related protein Rab-3A [Mus musculus]
gi|73986147|ref|XP_541942.2| PREDICTED: ras-related protein Rab-3A [Canis lupus familiaris]
gi|149757273|ref|XP_001503278.1| PREDICTED: ras-related protein Rab-3A-like [Equus caballus]
gi|301753909|ref|XP_002912772.1| PREDICTED: ras-related protein Rab-3A-like [Ailuropoda melanoleuca]
gi|344282612|ref|XP_003413067.1| PREDICTED: ras-related protein Rab-3A-like [Loxodonta africana]
gi|354473979|ref|XP_003499209.1| PREDICTED: ras-related protein Rab-3A-like [Cricetulus griseus]
gi|395847913|ref|XP_003796608.1| PREDICTED: ras-related protein Rab-3A [Otolemur garnettii]
gi|410950864|ref|XP_003982122.1| PREDICTED: ras-related protein Rab-3A [Felis catus]
gi|51702793|sp|P63012.1|RAB3A_RAT RecName: Full=Ras-related protein Rab-3A
gi|51702798|sp|P63011.1|RAB3A_MOUSE RecName: Full=Ras-related protein Rab-3A
gi|122064948|sp|Q06AU3.1|RAB3A_PIG RecName: Full=Ras-related protein Rab-3A
gi|2342528|emb|CAA51470.1| low molecular weight GTP-binding protein [Mus musculus]
gi|12837856|dbj|BAB23976.1| unnamed protein product [Mus musculus]
gi|31566349|gb|AAH53519.1| Rab3a protein [Mus musculus]
gi|56270582|gb|AAH87580.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|74177523|dbj|BAE34630.1| unnamed protein product [Mus musculus]
gi|74187365|dbj|BAE36661.1| unnamed protein product [Mus musculus]
gi|112292943|dbj|BAF02849.1| Rab3A [Mus musculus]
gi|115394766|gb|ABI97177.1| Rab-3A [Sus scrofa]
gi|148696919|gb|EDL28866.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148696920|gb|EDL28867.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036066|gb|EDL90732.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|186886450|gb|ACC93601.1| Rab3A [Ovis aries]
gi|281343531|gb|EFB19115.1| hypothetical protein PANDA_000545 [Ailuropoda melanoleuca]
gi|344241347|gb|EGV97450.1| Ras-related protein Rab-3A [Cricetulus griseus]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|4506367|ref|NP_002857.1| ras-related protein Rab-3A [Homo sapiens]
gi|383873155|ref|NP_001244696.1| ras-related protein Rab-3A [Macaca mulatta]
gi|114676111|ref|XP_512511.2| PREDICTED: ras-related protein Rab-3A isoform 3 [Pan troglodytes]
gi|296233287|ref|XP_002761948.1| PREDICTED: ras-related protein Rab-3A [Callithrix jacchus]
gi|397493887|ref|XP_003817827.1| PREDICTED: ras-related protein Rab-3A isoform 1 [Pan paniscus]
gi|397493889|ref|XP_003817828.1| PREDICTED: ras-related protein Rab-3A isoform 2 [Pan paniscus]
gi|402904778|ref|XP_003915217.1| PREDICTED: ras-related protein Rab-3A [Papio anubis]
gi|403303431|ref|XP_003942330.1| PREDICTED: ras-related protein Rab-3A [Saimiri boliviensis
boliviensis]
gi|410053467|ref|XP_003953458.1| PREDICTED: ras-related protein Rab-3A [Pan troglodytes]
gi|426387780|ref|XP_004060340.1| PREDICTED: ras-related protein Rab-3A [Gorilla gorilla gorilla]
gi|131801|sp|P20336.1|RAB3A_HUMAN RecName: Full=Ras-related protein Rab-3A
gi|75075791|sp|Q4R4R9.1|RAB3A_MACFA RecName: Full=Ras-related protein Rab-3A
gi|7684383|gb|AAF67385.1|AC068499_1 RAB3A, member RAS oncogene family [Homo sapiens]
gi|20379038|gb|AAM21079.1|AF498931_1 small GTP binding protein RAB3A [Homo sapiens]
gi|550064|gb|AAA60242.1| GTP-binding protein [Homo sapiens]
gi|5678931|gb|AAD46811.1| GTP-binding protein [Homo sapiens]
gi|15079994|gb|AAH11782.1| RAB3A, member RAS oncogene family [Homo sapiens]
gi|67971128|dbj|BAE01906.1| unnamed protein product [Macaca fascicularis]
gi|119605078|gb|EAW84672.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605079|gb|EAW84673.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605080|gb|EAW84674.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260141|dbj|BAF82248.1| unnamed protein product [Homo sapiens]
gi|190689931|gb|ACE86740.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|190691303|gb|ACE87426.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|208967240|dbj|BAG73634.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|351701226|gb|EHB04145.1| Ras-related protein Rab-3A [Heterocephalus glaber]
gi|355703320|gb|EHH29811.1| Ras-related protein Rab-3A [Macaca mulatta]
gi|355763570|gb|EHH62193.1| Ras-related protein Rab-3A [Macaca fascicularis]
gi|380783409|gb|AFE63580.1| ras-related protein Rab-3A [Macaca mulatta]
gi|383413957|gb|AFH30192.1| ras-related protein Rab-3A [Macaca mulatta]
gi|384944492|gb|AFI35851.1| ras-related protein Rab-3A [Macaca mulatta]
gi|410216084|gb|JAA05261.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410250372|gb|JAA13153.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410295286|gb|JAA26243.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410337961|gb|JAA37927.1| RAB3A, member RAS oncogene family [Pan troglodytes]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|449279549|gb|EMC87121.1| Ras-related protein Rab-3A, partial [Columba livia]
Length = 214
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|54696260|gb|AAV38502.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|61368754|gb|AAX43231.1| RAB3A member RAS oncogene family [synthetic construct]
Length = 221
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F + P K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + D + ++L
Sbjct: 12 FTSSPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRL 70
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 71 QLWDTAGQ 78
>gi|294656310|ref|XP_002770249.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
gi|199431371|emb|CAR65608.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
Length = 215
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + +++ LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|432854572|ref|XP_004067967.1| PREDICTED: ras-related protein Rab-3A-like [Oryzias latipes]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|395818775|ref|XP_003782792.1| PREDICTED: ras-related protein Rab-3C [Otolemur garnettii]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|354467588|ref|XP_003496251.1| PREDICTED: ras-related protein Rab-3C-like [Cricetulus griseus]
Length = 228
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 31 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 89
Query: 130 Q 130
Q
Sbjct: 90 Q 90
>gi|57008|emb|CAA30005.1| unnamed protein product [Rattus norvegicus]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|345793828|ref|XP_851045.2| PREDICTED: ras-related protein Rab-3C [Canis lupus familiaris]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|110350677|ref|NP_776871.2| ras-related protein Rab-3A [Bos taurus]
gi|116242742|sp|P11023.3|RAB3A_BOVIN RecName: Full=Ras-related protein Rab-3A; AltName: Full=SMG P25A
gi|109658293|gb|AAI18279.1| RAB3A, member RAS oncogene family [Bos taurus]
gi|296486045|tpg|DAA28158.1| TPA: ras-related protein Rab-3A [Bos taurus]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|13470090|ref|NP_076341.1| ras-related protein Rab-3C [Mus musculus]
gi|51338595|sp|P62824.1|RAB3C_RAT RecName: Full=Ras-related protein Rab-3C
gi|51338605|sp|P62823.1|RAB3C_MOUSE RecName: Full=Ras-related protein Rab-3C
gi|12597437|gb|AAG60047.1|AF312037_1 small GTP binding protein Rab3C [Mus musculus]
gi|1304207|dbj|BAA11302.1| rab3C [Rattus norvegicus]
gi|12851806|dbj|BAB29172.1| unnamed protein product [Mus musculus]
gi|13027787|gb|AAK08980.1| small GTP-binding protein Rab3C [Mus musculus]
gi|13094065|emb|CAC32042.1| Rab3C [Mus musculus]
gi|26348082|dbj|BAC37689.1| unnamed protein product [Mus musculus]
gi|74216593|dbj|BAE37733.1| unnamed protein product [Mus musculus]
gi|74223648|dbj|BAE28694.1| unnamed protein product [Mus musculus]
gi|89130661|gb|AAI14336.1| RAB3C, member RAS oncogene family [Mus musculus]
gi|112292947|dbj|BAF02851.1| Rab3C [Mus musculus]
gi|148686488|gb|EDL18435.1| RAB3C, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149059322|gb|EDM10329.1| RAB3C, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|444726632|gb|ELW67156.1| Ras-related protein Rab-3A [Tupaia chinensis]
Length = 208
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|432105575|gb|ELK31772.1| Ras-related protein Rab-3C [Myotis davidii]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|410918321|ref|XP_003972634.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 221
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++KLQ+WD
Sbjct: 22 DDMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI-YRNNTRVKLQIWDT 80
Query: 128 AGQ 130
AGQ
Sbjct: 81 AGQ 83
>gi|403267520|ref|XP_003925875.1| PREDICTED: ras-related protein Rab-3C [Saimiri boliviensis
boliviensis]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|340054168|emb|CCC48462.1| putative small GTP-binding protein Rab28 [Trypanosoma vivax Y486]
Length = 247
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKVIV+G+ VGKTS ++RY + F ++YK T+G+DF K V Q++ LQ+WDI GQ
Sbjct: 15 FKVIVVGNAGVGKTSLIRRYCETEFGQEYKQTIGLDFYSKKVDLPRHQQVLLQIWDIGGQ 74
>gi|440896449|gb|ELR48367.1| Ras-related protein Rab-3A, partial [Bos grunniens mutus]
Length = 221
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 23 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|432871908|ref|XP_004072037.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+FK+++IG+ +VGKTS + RY ++F Y TVG+DF +K V +R++++IKLQ+WD A
Sbjct: 24 HMFKLLIIGNSSVGKTSVLFRYADDSFNPAYVSTVGIDFKVKTV-FRNEKRIKLQIWDTA 82
Query: 129 GQ 130
GQ
Sbjct: 83 GQ 84
>gi|350594330|ref|XP_003483878.1| PREDICTED: ras-related protein Rab-3C-like isoform 2 [Sus scrofa]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|19424194|ref|NP_598220.1| ras-related protein Rab-3C [Rattus norvegicus]
gi|1373214|gb|AAC52879.1| GTP-binding protein [Rattus norvegicus]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|7496249|pir||T15546 hypothetical protein C18A3.6 - Caenorhabditis elegans
Length = 343
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 87 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 145
Query: 130 Q 130
Q
Sbjct: 146 Q 146
>gi|344235947|gb|EGV92050.1| Ras-related protein Rab-3C [Cricetulus griseus]
Length = 220
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|114052949|ref|NP_001040071.1| ras-related protein Rab-3C [Bos taurus]
gi|149732720|ref|XP_001495120.1| PREDICTED: ras-related protein Rab-3C-like [Equus caballus]
gi|426246459|ref|XP_004017011.1| PREDICTED: ras-related protein Rab-3C [Ovis aries]
gi|108935883|sp|P10949.3|RAB3C_BOVIN RecName: Full=Ras-related protein Rab-3C; AltName: Full=SMG P25C
gi|86438380|gb|AAI12796.1| RAB3C, member RAS oncogene family [Bos taurus]
gi|296475826|tpg|DAA17941.1| TPA: RAB3C, member RAS oncogene family [Bos taurus]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|410948619|ref|XP_003981028.1| PREDICTED: ras-related protein Rab-3C [Felis catus]
Length = 227
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|426384624|ref|XP_004058859.1| PREDICTED: ras-related protein Rab-3C [Gorilla gorilla gorilla]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|301765878|ref|XP_002918360.1| PREDICTED: ras-related protein Rab-3C-like [Ailuropoda melanoleuca]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|410921832|ref|XP_003974387.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|348568990|ref|XP_003470281.1| PREDICTED: ras-related protein Rab-3C-like [Cavia porcellus]
Length = 219
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|255725294|ref|XP_002547576.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
gi|240135467|gb|EER35021.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
Length = 216
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + +++ LQ+WD AG
Sbjct: 9 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVALQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|1045640|gb|AAC52704.1| rab3c, partial [Rattus norvegicus]
Length = 195
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 7 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|291235020|ref|XP_002737444.1| PREDICTED: Rab-protein 3-like isoform 1 [Saccoglossus kowalevskii]
gi|291235022|ref|XP_002737445.1| PREDICTED: Rab-protein 3-like isoform 2 [Saccoglossus kowalevskii]
Length = 219
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|196011170|ref|XP_002115449.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
gi|190582220|gb|EDV22294.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
Length = 222
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 25 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 83
Query: 130 Q 130
Q
Sbjct: 84 Q 84
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+V+ FK D K T+GV+FA K V R+ + K Q+WD AG
Sbjct: 10 LFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK++++GD VGK++ V R+ +N F KD K T+GV+FA K V+ D + +K Q+WD AG
Sbjct: 9 IFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|395510325|ref|XP_003759428.1| PREDICTED: ras-related protein Rab-3C [Sarcophilus harrisii]
Length = 227
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IGD VGK+ + R+ ++T+ +DY T+GVDF ++ ++ D + IKL
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIEL-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|148686490|gb|EDL18437.1| RAB3C, member RAS oncogene family, isoform CRA_c [Mus musculus]
Length = 225
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|345484022|ref|XP_001599973.2| PREDICTED: ras-related protein Rab-3-like [Nasonia vitripennis]
Length = 256
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 54 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 112
Query: 130 Q 130
Q
Sbjct: 113 Q 113
>gi|291395402|ref|XP_002714096.1| PREDICTED: RAB3C, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|149059323|gb|EDM10330.1| RAB3C, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 225
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|449270352|gb|EMC81037.1| Ras-related protein Rab-3C [Columba livia]
Length = 219
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|390459930|ref|XP_002806670.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-3C-like
[Callithrix jacchus]
Length = 225
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|291235024|ref|XP_002737446.1| PREDICTED: Rab-protein 3-like isoform 3 [Saccoglossus kowalevskii]
Length = 227
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 29 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 87
Query: 130 Q 130
Q
Sbjct: 88 Q 88
>gi|441628727|ref|XP_003275954.2| PREDICTED: ras-related protein Rab-3A, partial [Nomascus
leucogenys]
Length = 186
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|448097583|ref|XP_004198710.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|448101433|ref|XP_004199559.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380132|emb|CCE82373.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380981|emb|CCE81440.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + +++ LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDNNKQVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|344272308|ref|XP_003407975.1| PREDICTED: ras-related protein Rab-3C-like [Loxodonta africana]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|545389|gb|AAB29894.1| Rab3B [Rattus sp.]
Length = 67
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY +TF + TVG+DF +K V +R ++++KLQ+WD
Sbjct: 5 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|324520808|gb|ADY47717.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++V+GD GK+ + R+ +N+F+ D+ T+GVDF LK +K + KI+L+LWD AG
Sbjct: 6 LFKIVVVGDHNCGKSCILLRFAENSFRHDHISTLGVDFKLKTIKL-GRDKIRLELWDTAG 64
>gi|296475820|tpg|DAA17935.1| TPA: ras-related protein Rab-3C [Bos taurus]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|170588641|ref|XP_001899082.1| Ras family protein [Brugia malayi]
gi|158593295|gb|EDP31890.1| Ras family protein [Brugia malayi]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD GK+ + R+ +N+F++D+ T+GVDF LK VK + KI+L+LWD AG
Sbjct: 6 LFKIVIVGDHNCGKSCILLRFAENSFRQDHITTLGVDFKLKTVKL-GRDKIRLELWDTAG 64
Query: 130 Q 130
Sbjct: 65 M 65
>gi|126315213|ref|XP_001366023.1| PREDICTED: ras-related protein Rab-3C-like [Monodelphis domestica]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|350594328|ref|XP_003359827.2| PREDICTED: ras-related protein Rab-3C-like isoform 1 [Sus scrofa]
Length = 225
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|74145385|dbj|BAE36145.1| unnamed protein product [Mus musculus]
Length = 225
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|332016796|gb|EGI57617.1| Ras-related protein Rab-3 [Acromyrmex echinatior]
Length = 260
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 57 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 115
Query: 130 Q 130
Q
Sbjct: 116 Q 116
>gi|327262966|ref|XP_003216293.1| PREDICTED: ras-related protein Rab-3C-like [Anolis carolinensis]
Length = 219
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
+L KVI++GD VGKTS + +YVQ F K+YK T+G DF K ++ D +K+ +Q+WD A
Sbjct: 7 RLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEV-DDKKVTMQIWDTA 65
Query: 129 GQ 130
GQ
Sbjct: 66 GQ 67
>gi|395750736|ref|XP_002828966.2| PREDICTED: ras-related protein Rab-3A [Pongo abelii]
Length = 159
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|344283301|ref|XP_003413410.1| PREDICTED: ras-related protein Rab-3D-like [Loxodonta africana]
Length = 371
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 174 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 232
Query: 130 Q 130
Q
Sbjct: 233 Q 233
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ ++ D +++KLQ+WD
Sbjct: 5 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTIEV-DGERVKLQIWDT 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|391330041|ref|XP_003739473.1| PREDICTED: ras-related protein Rab-3-like [Metaseiulus
occidentalis]
Length = 218
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 17 MFKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 75
Query: 130 Q 130
Q
Sbjct: 76 Q 76
>gi|301617603|ref|XP_002938225.1| PREDICTED: ras-related protein Rab-3C-like [Xenopus (Silurana)
tropicalis]
Length = 219
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|363744183|ref|XP_003642996.1| PREDICTED: ras-related protein Rab-3C [Gallus gallus]
Length = 227
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|344231004|gb|EGV62889.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 260
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++ +GD VGKTS + R++ +TF + Y T+G+DF K + D + I+LQLWD AGQ
Sbjct: 64 YKIVFLGDQGVGKTSLITRFMYDTFDEQYAATIGIDFLSKTMYLEDNKTIRLQLWDTAGQ 123
>gi|297741446|emb|CBI32577.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 48 DPSLKLVRVPSIRKSFNAPPEK--LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGV 105
DPS L R+P++ P + L KVI++GD VGKTS + +YV F YK T+G
Sbjct: 37 DPSNSLSRLPTM------PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA 90
Query: 106 DFALKIVKWRDQQKIKLQLWDIAGQ 130
DF K V++ D+ LQ+WD AGQ
Sbjct: 91 DFLTKEVQFEDRL-FTLQIWDTAGQ 114
>gi|313218156|emb|CBY41456.1| unnamed protein product [Oikopleura dioica]
gi|313222707|emb|CBY41703.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L K++++GD VGK+S + RY +TF + Y GT+GVDF LK + +R Q+I LQLWD AG
Sbjct: 6 LCKLLLVGDSGVGKSSILIRYTDDTFTEKYTGTIGVDFKLKKI-FRKGQEINLQLWDTAG 64
Query: 130 Q 130
Q
Sbjct: 65 Q 65
>gi|341881403|gb|EGT37338.1| hypothetical protein CAEBREN_30856 [Caenorhabditis brenneri]
Length = 283
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 86 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 144
Query: 130 Q 130
Q
Sbjct: 145 Q 145
>gi|440299673|gb|ELP92221.1| hypothetical protein EIN_117950 [Entamoeba invadens IP1]
Length = 200
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++VIGD VGKTS +QRY F DY TVGVDF K+++ +++IKLQ+WD AG
Sbjct: 9 LFKILVIGDSGVGKTSIMQRYCDLDFSSDYISTVGVDFKPKMLEV-GEKRIKLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|417397335|gb|JAA45701.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 219
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFSPAFVSTVGIDFKVKTV-YRHNKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|402469023|gb|EJW04091.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 205
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+I+IG+ VGKTS + RY+ NT+ +Y T+GVDF +K +K IKLQ+WD AG
Sbjct: 8 LFKIILIGNSGVGKTSLLNRYIDNTYHGNYISTIGVDFKIKTLKVS-SDLIKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|194373731|dbj|BAG56961.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|427787355|gb|JAA59129.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|156553809|ref|XP_001603302.1| PREDICTED: ras-related protein Rab-35-like [Nasonia vitripennis]
Length = 202
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ V D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGNYITTIGVDFKIRTVDV-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|294657272|ref|XP_459580.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
gi|199432566|emb|CAG87807.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
Length = 204
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++ +GD +VGKTS + R++ +TF Y T+G+DF K + D + I+LQLWD AGQ
Sbjct: 10 YKIVFLGDQSVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIRLQLWDTAGQ 69
>gi|325297096|ref|NP_001191556.1| Rab3 [Aplysia californica]
gi|392973|gb|AAA03315.1| Rab3 [Aplysia californica]
Length = 219
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|66514595|ref|XP_623213.1| PREDICTED: ras-related protein Rab-3 isoform 2 [Apis mellifera]
Length = 269
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 67 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 125
Query: 130 Q 130
Q
Sbjct: 126 Q 126
>gi|338726033|ref|XP_001493972.2| PREDICTED: EF-hand calcium-binding domain-containing protein
4B-like [Equus caballus]
Length = 728
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ P++LFK++ +GD VGKTSF++R+ ++ F TVG+D+ +K V+ D Q + LQL
Sbjct: 537 STPDRLFKIVFVGDSAVGKTSFLRRFCEDRFSPGTAATVGIDYRVKTVRVDDSQ-VALQL 595
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 596 WDTAGQ 601
>gi|312071697|ref|XP_003138728.1| rab family protein 3 [Loa loa]
gi|307766114|gb|EFO25348.1| Ras-like protein Rab-3 [Loa loa]
Length = 221
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|198436228|ref|XP_002119506.1| PREDICTED: similar to Rab3 [Ciona intestinalis]
Length = 220
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|313227767|emb|CBY22916.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L K++++GD VGK+S + RY +TF + Y GT+GVDF LK + +R Q+I LQLWD AG
Sbjct: 6 LCKLLLVGDSGVGKSSILIRYTDDTFTEKYTGTIGVDFKLKKI-FRKGQEINLQLWDTAG 64
Query: 130 Q 130
Q
Sbjct: 65 Q 65
>gi|225717542|gb|ACO14617.1| Ras-related protein Rab-3 [Caligus clemensi]
Length = 359
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 163 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 221
Query: 130 Q 130
Q
Sbjct: 222 Q 222
>gi|170590438|ref|XP_001899979.1| Ras-related protein Rab-3 [Brugia malayi]
gi|158592611|gb|EDP31209.1| Ras-related protein Rab-3, putative [Brugia malayi]
Length = 213
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 46 IIDPSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGV 105
+I SL + + F + LFK+++IG+ VGK+ + RY +N+F +++ T+GV
Sbjct: 10 VISSSLNFTILFNCLTYF--YSDYLFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGV 67
Query: 106 DFALKIVKWRDQQKIKLQLWDIAGQ 130
DF +K + D+Q +KLQ+WD AGQ
Sbjct: 68 DFKIKTIML-DEQIVKLQIWDTAGQ 91
>gi|427787329|gb|JAA59116.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|339250014|ref|XP_003373992.1| GTP-binding protein Rab-3D [Trichinella spiralis]
gi|316969762|gb|EFV53812.1| GTP-binding protein Rab-3D [Trichinella spiralis]
Length = 218
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 19 MFKILIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 77
Query: 130 Q 130
Q
Sbjct: 78 Q 78
>gi|281349629|gb|EFB25213.1| hypothetical protein PANDA_002025 [Ailuropoda melanoleuca]
Length = 166
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P++LFK++++G+ VGKTSF++R+ ++ F TVG+D+ +K+V D+ + LQLWD
Sbjct: 4 PDRLFKIVLVGNSAVGKTSFLRRFCEDRFAPGLAATVGIDYQVKMV-CVDESHVALQLWD 62
Query: 127 IAGQ 130
AGQ
Sbjct: 63 TAGQ 66
>gi|383854082|ref|XP_003702551.1| PREDICTED: ras-related protein Rab-3-like [Megachile rotundata]
Length = 264
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 62 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 120
Query: 130 Q 130
Q
Sbjct: 121 Q 121
>gi|350411512|ref|XP_003489373.1| PREDICTED: ras-related protein Rab-3-like [Bombus impatiens]
Length = 270
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 68 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 126
Query: 130 Q 130
Q
Sbjct: 127 Q 127
>gi|403303217|ref|XP_003942239.1| PREDICTED: EF-hand calcium-binding domain-containing protein 4B
[Saimiri boliviensis boliviensis]
Length = 732
Score = 68.2 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K +AP P++LFK++ +G+ VG
Sbjct: 501 VSDQGGQGQIQEA--PPLKLTPTSPRGQPVGKEALCKEESAPSAPDRLFKIVFVGNAAVG 558
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++ + ++ F TVG+D+ +K VK D Q + LQLWD AGQ
Sbjct: 559 KTSFLKSFCEDRFSPGMAATVGIDYRVKTVKVDDSQ-VALQLWDTAGQ 605
>gi|15042957|ref|NP_114080.2| ras-related protein Rab-3D [Mus musculus]
gi|464569|sp|P35276.1|RAB3D_MOUSE RecName: Full=Ras-related protein Rab-3D
gi|9082184|gb|AAF82769.1|AF263365_1 Rab3D [Mus musculus]
gi|9082186|gb|AAF82770.1|AF263366_1 Rab3D [Mus musculus]
gi|200632|gb|AAA40026.1| GTP-binding protein [Mus musculus]
gi|14789745|gb|AAH10779.1| Rab3d protein [Mus musculus]
gi|18042808|gb|AAH20010.1| Rab3d protein [Mus musculus]
gi|26339304|dbj|BAC33323.1| unnamed protein product [Mus musculus]
gi|74142115|dbj|BAE41117.1| unnamed protein product [Mus musculus]
gi|112292949|dbj|BAF02852.1| Rab3D [Mus musculus]
gi|148693272|gb|EDL25219.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693273|gb|EDL25220.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693274|gb|EDL25221.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693275|gb|EDL25222.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693277|gb|EDL25224.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|344231005|gb|EGV62890.1| hypothetical protein CANTEDRAFT_115849 [Candida tenuis ATCC 10573]
Length = 209
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++ +GD VGKTS + R++ +TF + Y T+G+DF K + D + I+LQLWD AGQ
Sbjct: 13 YKIVFLGDQGVGKTSLITRFMYDTFDEQYAATIGIDFLSKTMYLEDNKTIRLQLWDTAGQ 72
>gi|4930237|pdb|3RAB|A Chain A, Gppnhp-bound Rab3a At 2.0 A Resolution
Length = 169
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R+ ++IKLQ+WD AG
Sbjct: 5 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTAG 63
Query: 130 Q 130
Q
Sbjct: 64 Q 64
>gi|167393508|ref|XP_001740606.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895241|gb|EDR22979.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 208
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IG+ VGKT+ +QR+ +NTF+ Y TVGVDF K++K + + +K+QLWD
Sbjct: 7 DHLFKILIIGESGVGKTAIMQRFCENTFEPVYISTVGVDFKPKVIKVGN-KTVKMQLWDT 65
Query: 128 AGQN 131
AGQ+
Sbjct: 66 AGQD 69
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ V + Q++KLQ+WD
Sbjct: 11 DHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI-NGQRVKLQIWDT 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|410924594|ref|XP_003975766.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R ++IKLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTPTFVSTVGIDFKVKTI-YRSDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK+S + R+ +N F D K T+GV+FA + ++ DQ+ IK Q+WD AG
Sbjct: 11 LFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEV-DQKTIKAQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|167387392|ref|XP_001738141.1| GTP-binding protein YPTC1 [Entamoeba dispar SAW760]
gi|165898771|gb|EDR25554.1| GTP-binding protein YPTC1, putative [Entamoeba dispar SAW760]
Length = 203
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
LFK+++IG+ VGKT+ +QR+ N F+ Y TVGVDF LK++K + + IK+QLWD A
Sbjct: 10 HLFKILIIGESGVGKTALMQRFCDNIFEPCYMPTVGVDFKLKLMKL-NNEIIKMQLWDTA 68
Query: 129 GQ 130
GQ
Sbjct: 69 GQ 70
>gi|148686489|gb|EDL18436.1| RAB3C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 130
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|268572557|ref|XP_002641352.1| C. briggsae CBR-RAB-35 protein [Caenorhabditis briggsae]
Length = 209
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF ++Y T+GVDF ++ + + Q++KLQ+WD
Sbjct: 8 DHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDI-NGQRVKLQIWDT 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|115534952|ref|NP_508455.2| Protein K02E10.1 [Caenorhabditis elegans]
gi|351063986|emb|CCD72274.1| Protein K02E10.1 [Caenorhabditis elegans]
Length = 218
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
LFK++V+GD GK+ + R+ +N+F+ D+ T+GVDF LK +K + KI+L+LWD A
Sbjct: 5 HLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKL-GRDKIRLELWDTA 63
Query: 129 G 129
G
Sbjct: 64 G 64
>gi|313220927|emb|CBY31762.1| unnamed protein product [Oikopleura dioica]
gi|313226508|emb|CBY21653.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ VGKTSF+ RY +++ + TVG+DF +K V+ R+ +++KLQ+WD AG
Sbjct: 19 MFKLLIIGNSAVGKTSFLFRYADDSYTSAFVSTVGIDFKVKTVQ-RNNKRVKLQIWDTAG 77
Query: 130 Q 130
Q
Sbjct: 78 Q 78
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ V + Q++KLQ+WD
Sbjct: 38 DHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI-NGQRVKLQIWDT 96
Query: 128 AGQ 130
AGQ
Sbjct: 97 AGQ 99
>gi|340729787|ref|XP_003403177.1| PREDICTED: ras-related protein Rab-3-like [Bombus terrestris]
Length = 270
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 68 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 126
Query: 130 Q 130
Q
Sbjct: 127 Q 127
>gi|301108157|ref|XP_002903160.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097532|gb|EEY55584.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
Length = 220
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KV+++G+ GKTS ++R+ Q+ F ++Y T+G DF KI+ + +Q I LQLWDIAGQ
Sbjct: 1 MKVLIVGNARCGKTSTIRRFTQDDFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQ 60
Query: 131 N 131
+
Sbjct: 61 D 61
>gi|67473169|ref|XP_652352.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469191|gb|EAL46966.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790054|dbj|BAD82823.1| small GTPase EhRabC3 [Entamoeba histolytica]
gi|407043332|gb|EKE41887.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702822|gb|EMD43384.1| small GTPase EhRabC3, putative [Entamoeba histolytica KU27]
Length = 208
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IG+ VGKT+ +QR+ +NTF+ Y TVGVDF K++K + + +K+QLWD
Sbjct: 7 DHLFKILIIGESGVGKTAIMQRFCENTFEPVYISTVGVDFKPKVIKVGN-KTVKMQLWDT 65
Query: 128 AGQN 131
AGQ+
Sbjct: 66 AGQD 69
>gi|270013048|gb|EFA09496.1| hypothetical protein TcasGA2_TC010990 [Tribolium castaneum]
Length = 297
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 98 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 156
Query: 130 Q 130
Q
Sbjct: 157 Q 157
>gi|167396307|ref|XP_001742002.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893199|gb|EDR21539.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 194
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKV++IG+P+VGKT+ ++RY ++ F + T+GVDF K+VK D IKLQLWD AGQ
Sbjct: 9 FKVLIIGEPSVGKTAIMERYCEDKFHDELISTIGVDFNSKLVKVGD-LTIKLQLWDTAGQ 67
>gi|149239963|ref|XP_001525857.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449980|gb|EDK44236.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
Length = 214
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F + YK T+G DF K + + + + LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSQQYKATIGADFLTKEIPIDNNKSVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|12851685|dbj|BAB29132.1| unnamed protein product [Mus musculus]
gi|148686491|gb|EDL18438.1| RAB3C, member RAS oncogene family, isoform CRA_d [Mus musculus]
Length = 169
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 88
Query: 130 Q 130
Q
Sbjct: 89 Q 89
>gi|57101400|ref|XP_533913.1| PREDICTED: ras-related protein Rab-3D [Canis lupus familiaris]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ V + Q++KLQ+WD
Sbjct: 11 DHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI-NGQRVKLQIWDT 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|167382616|ref|XP_001736187.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901348|gb|EDR27431.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 203
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD VGKT+ +QRY NTF + Y T+GVDF I+ ++ +KLQ+WD AG
Sbjct: 9 LFKILIVGDSGVGKTAILQRYCNNTFDERYVSTIGVDFKPMILNL-GERTVKLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|134024040|gb|AAI35229.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 274
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P+L + RK P + +VI+IG VGKTS ++R+ +TF + K TVGVDF
Sbjct: 51 PALTGAQAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFK 110
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
+K V+ R +KI+LQ+WD AGQ
Sbjct: 111 IKTVELRG-KKIRLQIWDTAGQ 131
>gi|145536137|ref|XP_001453796.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831462|emb|CAI39310.1| rab_C28 [Paramecium tetraurelia]
gi|124421529|emb|CAK86399.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IGD VGK+ + RY+++ F +Y T+GV+F KIVK ++KLQ+WD AG
Sbjct: 9 LFKFIIIGDAGVGKSCLLMRYMKDDFTTEYNVTIGVEFLSKIVKVDQNTQVKLQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|402582915|gb|EJW76860.1| Rab3 protein [Wuchereria bancrofti]
Length = 213
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|301771968|ref|XP_002921400.1| PREDICTED: ras-related protein Rab-3D-like [Ailuropoda melanoleuca]
gi|281337382|gb|EFB12966.1| hypothetical protein PANDA_010292 [Ailuropoda melanoleuca]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|149020460|gb|EDL78265.1| RAB3D, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 115
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD
Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 78
Query: 128 AGQ 130
AGQ
Sbjct: 79 AGQ 81
>gi|50582491|dbj|BAD32700.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|18034781|ref|NP_542147.1| GTP-binding protein Rab-3D [Rattus norvegicus]
gi|6093902|sp|Q63942.2|RAB3D_RAT RecName: Full=GTP-binding protein Rab-3D
gi|2253637|gb|AAB81202.1| GTP-binding protein rab3d [Rattus norvegicus]
gi|51859116|gb|AAH81741.1| RAB3D, member RAS oncogene family [Rattus norvegicus]
gi|149020457|gb|EDL78262.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020458|gb|EDL78263.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020459|gb|EDL78264.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020461|gb|EDL78266.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|354475103|ref|XP_003499769.1| PREDICTED: ras-related protein Rab-3D-like [Cricetulus griseus]
gi|344240071|gb|EGV96174.1| Ras-related protein Rab-3D [Cricetulus griseus]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|225710138|gb|ACO10915.1| Ras-related protein Rab-3 [Caligus rogercresseyi]
Length = 217
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|189502804|gb|ACE06783.1| unknown [Schistosoma japonicum]
Length = 248
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
++V + R + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K
Sbjct: 38 RVVIMSQTRDATDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 97
Query: 112 VKWRDQQKIKLQLWDIAGQ 130
+ +R +++KLQ+WD AGQ
Sbjct: 98 I-FRQDKRVKLQIWDTAGQ 115
>gi|17555956|ref|NP_499454.1| Protein RAB-35 [Caenorhabditis elegans]
gi|6018411|emb|CAB57899.1| Protein RAB-35 [Caenorhabditis elegans]
Length = 209
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF ++Y T+GVDF ++ + + Q++KLQ+WD
Sbjct: 8 DHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDI-NGQRVKLQIWDT 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|57525915|ref|NP_001003548.1| ras-related protein Rab-35 [Danio rerio]
gi|50418486|gb|AAH77124.1| RAB35, member RAS oncogene family [Danio rerio]
Length = 201
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEL-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|322800183|gb|EFZ21268.1| hypothetical protein SINV_07541 [Solenopsis invicta]
Length = 220
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 17 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 75
Query: 130 Q 130
Q
Sbjct: 76 Q 76
>gi|440298637|gb|ELP91268.1| GTP-binding protein YPTM1, putative [Entamoeba invadens IP1]
Length = 207
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IG+ VGKT+ +QR+ +NTF+ Y TVGVDF K++K + + +K+QLWD
Sbjct: 7 DHLFKILIIGESGVGKTAIMQRFCENTFEPVYISTVGVDFKPKVIKVGN-KTVKMQLWDT 65
Query: 128 AGQN 131
AGQ+
Sbjct: 66 AGQD 69
>gi|324522597|gb|ADY48087.1| Ras-related protein Rab-3 [Ascaris suum]
Length = 254
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 56 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 114
Query: 130 Q 130
Q
Sbjct: 115 Q 115
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
P EK +K++ +GDP VGKTS + R++ +TF Y+ T+G+DF K + + D + ++LQL
Sbjct: 18 TPLEK-YKLVFLGDPGVGKTSIITRFMYDTFDSSYQATIGIDFLSKTM-YLDDRTVRLQL 75
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 76 WDTAGQ 81
>gi|301108333|ref|XP_002903248.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097620|gb|EEY55672.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
Length = 220
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KV+++G+ GKTS ++R+ Q+ F ++Y T+G DF KI+ + +Q I LQLWDIAGQ
Sbjct: 1 MKVLIVGNARCGKTSTIRRFTQDKFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQ 60
Query: 131 N 131
+
Sbjct: 61 D 61
>gi|241997950|ref|XP_002433618.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
gi|215495377|gb|EEC05018.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|242004797|ref|XP_002423263.1| RAB 3 and, putative [Pediculus humanus corporis]
gi|212506265|gb|EEB10525.1| RAB 3 and, putative [Pediculus humanus corporis]
Length = 255
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 55 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 113
Query: 130 Q 130
Q
Sbjct: 114 Q 114
>gi|407416974|gb|EKF37872.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi
marinkellei]
Length = 229
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S + PE +K+IV+G+ VGKTS ++RY ++ F + YK T+GVDF K V+ Q +
Sbjct: 8 SEDTEPE--YKIIVVGNGAVGKTSLIRRYCEDGFGQGYKQTIGVDFYSKKVEIPGSQAVS 65
Query: 122 LQLWDIAGQ 130
LQ+WDI GQ
Sbjct: 66 LQIWDIGGQ 74
>gi|297703610|ref|XP_002828730.1| PREDICTED: ras-related protein Rab-3D [Pongo abelii]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD
Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 78
Query: 128 AGQ 130
AGQ
Sbjct: 79 AGQ 81
>gi|281353904|gb|EFB29488.1| hypothetical protein PANDA_006808 [Ailuropoda melanoleuca]
Length = 117
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD
Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 79
Query: 128 AGQ 130
AGQ
Sbjct: 80 AGQ 82
>gi|332375042|gb|AEE62662.1| unknown [Dendroctonus ponderosae]
Length = 203
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N+P FKVI+IGD VGKT+ RY + F + T+GVDF KIV+ D + I L+
Sbjct: 6 NSPRRNTFKVIIIGDSNVGKTTLTYRYCEGAFTDKPEATIGVDFRRKIVEI-DGEPITLE 64
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 65 LWDTAGQ 71
>gi|291000955|ref|XP_002683044.1| rab family small GTPase [Naegleria gruberi]
gi|284096673|gb|EFC50300.1| rab family small GTPase [Naegleria gruberi]
Length = 243
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ P+ ++K+I +GD T GKT+F+Q+YV N F K YK T+GVDF+ K + + LQ
Sbjct: 9 SKPKYMYKIIFVGDSTCGKTAFIQQYVNNYFSKTYKSTLGVDFSYKEYDYDENTCFNLQ- 67
Query: 125 WDIAGQ 130
DIAGQ
Sbjct: 68 -DIAGQ 72
>gi|341878786|gb|EGT34721.1| CBN-RAB-35 protein [Caenorhabditis brenneri]
Length = 201
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF ++Y T+GVDF ++ + + Q++KLQ+WD
Sbjct: 8 DHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDI-NGQRVKLQIWDT 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|308483958|ref|XP_003104180.1| CRE-RAB-35 protein [Caenorhabditis remanei]
gi|308258488|gb|EFP02441.1| CRE-RAB-35 protein [Caenorhabditis remanei]
Length = 209
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF ++Y T+GVDF ++ + + Q++KLQ+WD
Sbjct: 8 DHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDI-NGQRVKLQIWDT 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|348550975|ref|XP_003461306.1| PREDICTED: ras-related protein Rab-3D-like [Cavia porcellus]
Length = 363
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 166 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 224
Query: 130 Q 130
Q
Sbjct: 225 Q 225
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ V + Q++KLQ+WD
Sbjct: 11 DHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI-NGQRVKLQIWDT 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|296232933|ref|XP_002761799.1| PREDICTED: ras-related protein Rab-3D [Callithrix jacchus]
gi|403302366|ref|XP_003941831.1| PREDICTED: ras-related protein Rab-3D [Saimiri boliviensis
boliviensis]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|148693276|gb|EDL25223.1| RAB3D, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+I+IGD GK+S + R+ +T+ + Y T+GVDF +K VK D IKLQ+WD AG
Sbjct: 7 LFKIIIIGDSGAGKSSLLLRFADDTYSESYMSTIGVDFKIKTVKI-DNVTIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|432099579|gb|ELK28720.1| Ras-related protein Rab-3D [Myotis davidii]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|395850861|ref|XP_003797992.1| PREDICTED: ras-related protein Rab-3D [Otolemur garnettii]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|1845598|gb|AAB47925.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|407038920|gb|EKE39375.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 194
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKV++IG+P+VGKT+ ++RY ++ F + T+GVDF K+VK D IKLQLWD AGQ
Sbjct: 9 FKVLIIGEPSVGKTAIMERYCEDKFHDELISTIGVDFNSKLVKVGD-LTIKLQLWDTAGQ 67
>gi|112983326|ref|NP_001037620.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
gi|102993253|gb|ABF71469.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
Length = 218
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 19 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 77
Query: 130 Q 130
Q
Sbjct: 78 Q 78
>gi|426387223|ref|XP_004060073.1| PREDICTED: ras-related protein Rab-3D [Gorilla gorilla gorilla]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IGD VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|126135226|ref|XP_001384137.1| hypothetical protein PICST_67584 [Scheffersomyces stipitis CBS
6054]
gi|126091335|gb|ABN66108.1| Gtp-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 215
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + +++ LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDGNKQVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|405964683|gb|EKC30136.1| Ras-related protein Rab-3 [Crassostrea gigas]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|67478653|ref|XP_654710.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56471775|gb|EAL49319.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790060|dbj|BAD82826.1| small GTPase EhRabC6 [Entamoeba histolytica]
gi|449708421|gb|EMD47886.1| small GTPase EhRabC6, putative [Entamoeba histolytica KU27]
Length = 194
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FKV++IG+P+VGKT+ ++RY ++ F + T+GVDF K+VK D IKLQLWD AGQ
Sbjct: 9 FKVLIIGEPSVGKTAIMERYCEDKFHDELISTIGVDFNSKLVKVGD-LTIKLQLWDTAGQ 67
>gi|302563381|ref|NP_001181198.1| ras-related protein Rab-3D [Macaca mulatta]
gi|332253338|ref|XP_003275802.1| PREDICTED: ras-related protein Rab-3D [Nomascus leucogenys]
gi|402904261|ref|XP_003914965.1| PREDICTED: ras-related protein Rab-3D [Papio anubis]
gi|380786233|gb|AFE64992.1| ras-related protein Rab-3D [Macaca mulatta]
gi|383414467|gb|AFH30447.1| ras-related protein Rab-3D [Macaca mulatta]
gi|384944474|gb|AFI35842.1| ras-related protein Rab-3D [Macaca mulatta]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+V+ FK D K T+GV+FA K V ++ + K Q+WD AG
Sbjct: 10 LFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|323450441|gb|EGB06322.1| hypothetical protein AURANDRAFT_13379, partial [Aureococcus
anophagefferens]
Length = 177
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 18/78 (23%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALK----------------IVKWR 115
KV+V+GDP GKTS ++RYV N F ++ TVGVDFALK + R
Sbjct: 1 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVGRRAGAARVPPRVATAR 60
Query: 116 DQQ--KIKLQLWDIAGQN 131
D++ ++LQLWDIAGQ+
Sbjct: 61 DRRDTTVRLQLWDIAGQD 78
>gi|380020626|ref|XP_003694183.1| PREDICTED: ras-related protein Rab-3-like [Apis florea]
Length = 228
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 26 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 84
Query: 130 Q 130
Q
Sbjct: 85 Q 85
>gi|397776464|gb|AFO64930.1| Rab3 [Ruditapes philippinarum]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|194390312|dbj|BAG61918.1| unnamed protein product [Homo sapiens]
Length = 160
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IGD VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|440910159|gb|ELR59985.1| Ras-related protein Rab-3D, partial [Bos grunniens mutus]
Length = 222
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 25 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 83
Query: 130 Q 130
Q
Sbjct: 84 Q 84
>gi|300798495|ref|NP_001178304.1| ras-related protein Rab-3D [Bos taurus]
gi|426229005|ref|XP_004008584.1| PREDICTED: ras-related protein Rab-3D [Ovis aries]
gi|296485855|tpg|DAA27970.1| TPA: RAB3D, member RAS oncogene family-like [Bos taurus]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|114675473|ref|XP_001167816.1| PREDICTED: ras-related protein Rab-3D [Pan troglodytes]
gi|397520876|ref|XP_003830534.1| PREDICTED: ras-related protein Rab-3D [Pan paniscus]
gi|410257900|gb|JAA16917.1| RAB3D, member RAS oncogene family [Pan troglodytes]
gi|410303346|gb|JAA30273.1| RAB3D, member RAS oncogene family [Pan troglodytes]
gi|410329687|gb|JAA33790.1| RAB3D, member RAS oncogene family [Pan troglodytes]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|184186083|ref|NP_001116967.1| rab3 GTPase [Strongylocentrotus purpuratus]
gi|60653473|gb|AAB67800.2| GTP-binding protein [Strongylocentrotus purpuratus]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|355785814|gb|EHH65997.1| hypothetical protein EGM_02890 [Macaca fascicularis]
Length = 731
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K ++P P++LFK++ +G+ VG
Sbjct: 500 VSDQGAQGQIQEA--PPLKLTPTSPRGQPVGKEAVCKEESSPSAPDRLFKIVFVGNSAVG 557
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ ++ F TVG+D+ +K V D Q + LQLWD AGQ
Sbjct: 558 KTSFLRRFCEDRFSPGMAATVGIDYRVKTVNVDDSQ-VALQLWDTAGQ 604
>gi|311248642|ref|XP_003123225.1| PREDICTED: ras-related protein Rab-3D-like [Sus scrofa]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|308493695|ref|XP_003109037.1| CRE-RAB-3 protein [Caenorhabditis remanei]
gi|308247594|gb|EFO91546.1| CRE-RAB-3 protein [Caenorhabditis remanei]
Length = 280
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 83 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 141
Query: 130 Q 130
Q
Sbjct: 142 Q 142
>gi|308495033|ref|XP_003109705.1| hypothetical protein CRE_07553 [Caenorhabditis remanei]
gi|308245895|gb|EFO89847.1| hypothetical protein CRE_07553 [Caenorhabditis remanei]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
LFK++V+GD GK+ + R+ +N F+ D+ T+GVDF LK +K + KI+L+LWD A
Sbjct: 5 HLFKIVVVGDHNCGKSCILLRFAENNFRMDHISTLGVDFKLKTIKL-GRDKIRLELWDTA 63
Query: 129 G 129
G
Sbjct: 64 G 64
>gi|312072742|ref|XP_003139204.1| Ras family protein [Loa loa]
gi|307765636|gb|EFO24870.1| Ras family protein [Loa loa]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD GK+ + R+ +N+F++D+ T+GVDF LK +K + KI+L+LWD AG
Sbjct: 6 LFKIVIVGDHNCGKSCILLRFAENSFRQDHITTLGVDFKLKTIKL-GRDKIRLELWDTAG 64
Query: 130 Q 130
Sbjct: 65 M 65
>gi|407041210|gb|EKE40595.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 203
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD VGKT+ +QRY NTF + Y T+GVDF I+ ++ IKLQ+WD AG
Sbjct: 9 LFKILIVGDSGVGKTAILQRYCNNTFDERYISTIGVDFKPMILNV-GERTIKLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|402884812|ref|XP_003905867.1| PREDICTED: EF-hand calcium-binding domain-containing protein 4B
[Papio anubis]
Length = 731
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K ++P P++LFK++ +G+ VG
Sbjct: 500 VSDQGVQGQIQEA--PPLKLTPTSPRGQPVGKEAVCKEESSPSAPDRLFKIVFVGNSAVG 557
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ ++ F TVG+D+ +K V D Q + LQLWD AGQ
Sbjct: 558 KTSFLRRFCEDRFSPGMAATVGIDYRVKTVNVDDSQ-VALQLWDTAGQ 604
>gi|193664606|ref|XP_001944695.1| PREDICTED: ras-related protein Rab-3-like [Acyrthosiphon pisum]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|30583917|gb|AAP36207.1| Homo sapiens RAB3D, member RAS oncogene family [synthetic
construct]
gi|61370253|gb|AAX43463.1| RAB3D member RAS oncogene family [synthetic construct]
Length = 220
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|341874146|gb|EGT30081.1| hypothetical protein CAEBREN_09471 [Caenorhabditis brenneri]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
LFK++V+GD GK+ + R+ +N F+ D+ T+GVDF LK +K + KI+L+LWD A
Sbjct: 5 HLFKIVVVGDHNCGKSCILLRFAENNFRMDHISTLGVDFKLKTIKL-GRDKIRLELWDTA 63
Query: 129 G 129
G
Sbjct: 64 G 64
>gi|440494406|gb|ELQ76787.1| GTPase Rab1/YPT1, small G protein superfamily [Trachipleistophora
hominis]
Length = 198
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IG+ VGKTS + RYV T+ ++Y T+GVDF +K + R + +KLQ+WD AG
Sbjct: 7 LFKTILIGNSGVGKTSIINRYVDETYTENYISTIGVDFKIKTLT-RHGKTVKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|2689229|emb|CAA72628.1| rab3C-like protein [Trichinella pseudospiralis]
gi|2689239|emb|CAA72633.1| rab5A-like protein [Trichinella britovi]
Length = 73
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD
Sbjct: 11 DYMFKILIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDT 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|4759000|ref|NP_004274.1| ras-related protein Rab-3D [Homo sapiens]
gi|6093901|sp|O95716.1|RAB3D_HUMAN RecName: Full=Ras-related protein Rab-3D
gi|20379042|gb|AAM21081.1|AF498933_1 small GTP binding protein RAB3D [Homo sapiens]
gi|3859936|gb|AAC72918.1| GTP-binding protein [Homo sapiens]
gi|16741272|gb|AAH16471.1| RAB3D, member RAS oncogene family [Homo sapiens]
gi|119604595|gb|EAW84189.1| RAB3D, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119604596|gb|EAW84190.1| RAB3D, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|340373098|ref|XP_003385079.1| PREDICTED: ras-related protein Rab-13-like [Amphimedon
queenslandica]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LF++++ GD +VGKT + R+ N F+ + T+G+DF LK+ RD +KI++Q+WD
Sbjct: 10 DHLFQLLLCGDSSVGKTCLISRFADNEFRHTHINTIGIDFKLKLFTIRD-KKIRMQIWDT 68
Query: 128 AGQ 130
AGQ
Sbjct: 69 AGQ 71
>gi|351711967|gb|EHB14886.1| Ras-related protein Rab-3C [Heterocephalus glaber]
Length = 95
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V ++++++IKLQ+WD AG
Sbjct: 1 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDTAG 59
Query: 130 Q 130
Q
Sbjct: 60 Q 60
>gi|91086487|ref|XP_970606.1| PREDICTED: similar to rab 19, 41 and [Tribolium castaneum]
gi|270009806|gb|EFA06254.1| hypothetical protein TcasGA2_TC009113 [Tribolium castaneum]
Length = 221
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 21 LFKIVLIGDCGTGKTCIVQRFKNGTFIERHGNTIGVDFSMKTV-MVDGKKVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|156366233|ref|XP_001627044.1| predicted protein [Nematostella vectensis]
gi|156213941|gb|EDO34944.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ VGKTSF+ RY ++F + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|420274|pir||G42148 GTP-binding protein rab16 - rat
Length = 198
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 1 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 59
Query: 130 Q 130
Q
Sbjct: 60 Q 60
>gi|67483236|ref|XP_656897.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56474125|gb|EAL51508.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790056|dbj|BAD82824.1| small GTPase EhRabC4 [Entamoeba histolytica]
gi|449704320|gb|EMD44588.1| small GTPase EhRabC4, putative [Entamoeba histolytica KU27]
Length = 203
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD VGKT+ +QRY NTF + Y T+GVDF I+ ++ IKLQ+WD AG
Sbjct: 9 LFKILIVGDSGVGKTAILQRYCNNTFDERYISTIGVDFKPMILNV-GERTIKLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|149755446|ref|XP_001489964.1| PREDICTED: ras-related protein Rab-3D-like [Equus caballus]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|355714923|gb|AES05162.1| RAB3D, member RAS oncoprotein family [Mustela putorius furo]
Length = 201
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 5 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 63
Query: 130 Q 130
Q
Sbjct: 64 Q 64
>gi|410950474|ref|XP_003981930.1| PREDICTED: ras-related protein Rab-3D [Felis catus]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|307207614|gb|EFN85274.1| Ras-related protein Rab-3 [Harpegnathos saltator]
Length = 222
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|402589236|gb|EJW83168.1| hypothetical protein WUBG_05922, partial [Wuchereria bancrofti]
Length = 262
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N PPE+ F+V++ G+ +VGK+S V R++++TF T+GVD +K + D + + +
Sbjct: 60 LNGPPERTFRVVMCGNASVGKSSIVTRFIKDTFPGKLHSTLGVDCYVKTISI-DGKNVAI 118
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 119 QLWDTAGQ 126
>gi|449272831|gb|EMC82555.1| Ras-related protein Rab-44, partial [Columba livia]
Length = 167
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N+ P++LFK+I +G+ +VGKTSF++R+ ++ F TVGVD+ +K + D ++ LQ
Sbjct: 2 NSVPDRLFKIIFVGNSSVGKTSFLRRFCEDRFFPGTAATVGVDYNVKTITV-DSTQVALQ 60
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 61 LWDTAGQ 67
>gi|403356514|gb|EJY77853.1| Small GTPase Rab5c, putative [Oxytricha trifallax]
Length = 205
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKW--RDQQKIKLQLWD 126
++FKV+++GD +VGKTS +QR+ + FKKD T+G F KIV+ + +IKLQ+WD
Sbjct: 3 EMFKVVLLGDTSVGKTSILQRFAKGQFKKDQDATIGAHFMSKIVELPQANNAQIKLQVWD 62
Query: 127 IAGQ 130
AGQ
Sbjct: 63 TAGQ 66
>gi|321453282|gb|EFX64533.1| hypothetical protein DAPPUDRAFT_304534 [Daphnia pulex]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|443685362|gb|ELT88996.1| hypothetical protein CAPTEDRAFT_149846 [Capitella teleta]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|260821258|ref|XP_002605950.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
gi|229291287|gb|EEN61960.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRQDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|158634606|gb|ABW76149.1| Rab3 [Aiptasia pulchella]
Length = 221
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ VGKTSF+ RY ++F + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|115312968|gb|AAI24015.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P+L + RK P + +VI+IG VGKTS ++R+ +TF + K TVGVDF
Sbjct: 90 PALTGAQAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFK 149
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
+K V+ R +KI+LQ+WD AGQ
Sbjct: 150 IKTVELRG-KKIRLQIWDTAGQ 170
>gi|149239262|ref|XP_001525507.1| GTP-binding protein ryh1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451000|gb|EDK45256.1| GTP-binding protein ryh1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 220
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + D + I+LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEDGKTIRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|71982447|ref|NP_001021973.1| Protein RAB-3, isoform a [Caenorhabditis elegans]
gi|373219015|emb|CCD65020.1| Protein RAB-3, isoform a [Caenorhabditis elegans]
Length = 233
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 36 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 94
Query: 130 Q 130
Q
Sbjct: 95 Q 95
>gi|348673878|gb|EGZ13697.1| hypothetical protein PHYSODRAFT_513477 [Phytophthora sojae]
Length = 227
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KV+++G+ GKTS ++R+ Q+ F ++Y T+G DF KI+++ + I LQLWDIAGQ
Sbjct: 1 MKVLIVGNARCGKTSTIRRFTQDEFNEEYVSTIGADFVEKIIEYDEHLTISLQLWDIAGQ 60
Query: 131 N 131
+
Sbjct: 61 D 61
>gi|229593818|ref|XP_001026663.2| Ras family protein [Tetrahymena thermophila]
gi|225567282|gb|EAS06418.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777760|dbj|BAJ21276.1| Rab-family small GTPase Rab1D [Tetrahymena thermophila]
Length = 223
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
+ LFK+++IG+ VGKT + RY +N F ++ T+GVDF +K ++ D + IKLQ+WD
Sbjct: 16 SDHLFKILLIGNSGVGKTCMLMRYSENQFTYNFYNTIGVDFKIKALRLED-KNIKLQIWD 74
Query: 127 IAGQN 131
AGQ+
Sbjct: 75 TAGQD 79
>gi|33284843|emb|CAE17590.1| novel protein similar to human member of RAS oncogene family
(RAB35) [Danio rerio]
Length = 76
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEL-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|118354199|ref|XP_001010362.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89292129|gb|EAR90117.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777900|dbj|BAJ21346.1| Rab-family small GTPase Rab11F [Tetrahymena thermophila]
Length = 234
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+I++G+ VGK+ +QRY +N F +DY T+G +FA VK + Q +++Q+WD AG
Sbjct: 8 LFKIIMLGETGVGKSQMLQRYTKNKFTEDYVTTIGAEFATTSVKLNNGQVVQVQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|50747208|ref|XP_420785.1| PREDICTED: ras-related protein Rab-28 [Gallus gallus]
Length = 222
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P++ K++V+GD T GKTS R+ Q TF K YK T+G+DF LK + + LQ+WD
Sbjct: 10 PDRQLKLVVLGDGTAGKTSLAMRFAQETFGKQYKQTIGLDFYLKRIILPGNLNVTLQVWD 69
Query: 127 IAGQ 130
+ GQ
Sbjct: 70 VGGQ 73
>gi|348517184|ref|XP_003446115.1| PREDICTED: ras-related protein Rab-3C-like [Oreochromis niloticus]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY + F + TVG+DF +K V +++ ++IKLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDAFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|206539|gb|AAA41996.1| RAB16 [Rattus norvegicus]
Length = 198
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 1 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 59
Query: 130 Q 130
Q
Sbjct: 60 Q 60
>gi|125812908|ref|XP_001339327.1| PREDICTED: ras-related protein Rab-35-like [Danio rerio]
Length = 209
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
LFK+++IGD VGK+S + R+ N+F Y T+GVDF ++ V+ D +++KLQ+WD
Sbjct: 7 HHLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVEI-DGERVKLQIWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK++++GD VGK++ V R+ +N F KD K T+GV+FA K V+ D + +K Q+WD AGQ
Sbjct: 3 FKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTAGQ 62
>gi|91093088|ref|XP_969292.1| PREDICTED: similar to ras-related protein Rab-3C, putative
[Tribolium castaneum]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|256082187|ref|XP_002577342.1| rab 3 and [Schistosoma mansoni]
Length = 236
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R +++KLQ+WD AG
Sbjct: 34 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI-FRQDKRVKLQIWDTAG 92
Query: 130 Q 130
Q
Sbjct: 93 Q 93
>gi|198425868|ref|XP_002124344.1| PREDICTED: similar to RAS and EF hand domain containing [Ciona
intestinalis]
Length = 728
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P++++KV+ +G+ VGKTSF+Q++V ++F T+GVD+ +K ++ D Q I LQLWD
Sbjct: 530 PDRVYKVVFVGNSGVGKTSFIQQFVNSSFTSSISATIGVDYQMKTIRL-DAQVIALQLWD 588
Query: 127 IAGQ 130
AGQ
Sbjct: 589 TAGQ 592
>gi|301616136|ref|XP_002937521.1| PREDICTED: ras-related protein Rab-12 [Xenopus (Silurana)
tropicalis]
Length = 345
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 49 PSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
P+L + RK P + +VI+IG VGKTS ++R+ +TF + K TVGVDF
Sbjct: 122 PALTGAQAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFK 181
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
+K V+ R +KI+LQ+WD AGQ
Sbjct: 182 IKTVELRG-KKIRLQIWDTAGQ 202
>gi|213511948|ref|NP_001133667.1| Ras-related protein Rab-3D [Salmo salar]
gi|209154872|gb|ACI33668.1| Ras-related protein Rab-3D [Salmo salar]
Length = 224
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTS + RY ++F + TVG+DF +K V +R+++++KLQ+WD AG
Sbjct: 28 MFKLLIIGNSSVGKTSLLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDTAG 86
Query: 130 Q 130
Q
Sbjct: 87 Q 87
>gi|432873564|ref|XP_004072279.1| PREDICTED: ras-related protein Rab-3C-like [Oryzias latipes]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY + F + TVG+DF +K V +++ ++IKLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDAFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|118376794|ref|XP_001021578.1| Ras family protein [Tetrahymena thermophila]
gi|89303345|gb|EAS01333.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777810|dbj|BAJ21301.1| Rab-family small GTPase RabX10 [Tetrahymena thermophila]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+++FKV+++GDP VGK+ + +Y TF+ + TVG+DF +K+++ +D +K+QLWD
Sbjct: 5 DQMFKVLILGDPAVGKSCLLLQYCDQTFQPTHVATVGIDFKMKVLQIQD-STVKMQLWDT 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|307176976|gb|EFN66282.1| Ras-related protein Rab-35 [Camponotus floridanus]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVEI-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|296478535|tpg|DAA20650.1| TPA: RAB35, member RAS oncogene family [Bos taurus]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|145475115|ref|XP_001423580.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390641|emb|CAK56182.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
PE +FK I+IG+ + GKTS +Q ++ T K + TVGV+F+ K+++++D +KIKLQ+W
Sbjct: 9 TPEYIFKFILIGNSSTGKTSMLQYFINQTSKTKVQQTVGVEFSSKLLEYKD-KKIKLQIW 67
Query: 126 DIAGQ 130
D AGQ
Sbjct: 68 DTAGQ 72
>gi|330791275|ref|XP_003283719.1| Rab GTPase [Dictyostelium purpureum]
gi|325086342|gb|EGC39733.1| Rab GTPase [Dictyostelium purpureum]
Length = 195
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++V+GD GKTS + V +TF K Y T+GVDF LK++ W + +++LQLWDI+G
Sbjct: 14 YKILVVGDIGTGKTSITRSLVYDTFSKRYNPTIGVDFGLKVINWDPKTEVRLQLWDISGS 73
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+ + R+ ++T+ +DY T+GVDF ++ ++ D + IKL
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIEL-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|47217500|emb|CAG10880.1| unnamed protein product [Tetraodon nigroviridis]
Length = 221
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY + F + TVG+DF +K V +++ ++IKLQ+WD AG
Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYADDAFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|71663004|ref|XP_818500.1| small GTP-binding protein Rab28 [Trypanosoma cruzi strain CL
Brener]
gi|70883756|gb|EAN96649.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi]
Length = 229
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K+IV+G+ VGKTS ++RY ++ F + YK T+GVDF K V+ Q + LQ+WDI GQ
Sbjct: 15 YKIIVLGNGAVGKTSLIRRYCEDGFGQGYKQTIGVDFYSKRVEIPGSQAVSLQIWDIGGQ 74
>gi|432844372|ref|XP_004065737.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 221
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Query: 51 LKLVRVP-SIRKSFNAPPEK---LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVD 106
+ L +VP ++++ +A + +FK+++IG+ +VGKTSF+ R+ ++F + TVG+D
Sbjct: 1 MALAKVPVAVQEQRDAADQNFDYMFKLLIIGNSSVGKTSFLFRFADDSFTSAFVSTVGID 60
Query: 107 FALKIVKWRDQQKIKLQLWDIAGQ 130
F +K + +R+ +++KLQ+WD AGQ
Sbjct: 61 FKVKTI-YRNNKRVKLQIWDTAGQ 83
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVEV-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|170049010|ref|XP_001853751.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
gi|167870968|gb|EDS34351.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|45360691|ref|NP_989019.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|38174140|gb|AAH61434.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268698|emb|CAJ82712.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|262401089|gb|ACY66447.1| putative ras-related protein Rab [Scylla paramamosain]
Length = 197
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ ++ D +++KLQ+WD
Sbjct: 2 DHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEV-DGERVKLQIWDT 60
Query: 128 AGQ 130
AGQ
Sbjct: 61 AGQ 63
>gi|341900426|gb|EGT56361.1| CBN-RAB-3 protein [Caenorhabditis brenneri]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|148234955|ref|NP_001079974.1| RAB35, member RAS oncogene family [Xenopus laevis]
gi|34784624|gb|AAH57747.1| MGC69101 protein [Xenopus laevis]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|340714578|ref|XP_003395804.1| PREDICTED: ras-related protein Rab-43-like [Bombus terrestris]
gi|350411163|ref|XP_003489259.1| PREDICTED: ras-related protein Rab-43-like [Bombus impatiens]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 20 LFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTV-LIDDKKVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IGD VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|410922738|ref|XP_003974839.1| PREDICTED: ras-related protein Rab-3C-like [Takifugu rubripes]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY + F + TVG+DF +K V +++ ++IKLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDAFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|395847645|ref|XP_003796478.1| PREDICTED: EF-hand calcium-binding domain-containing protein 4B
[Otolemur garnettii]
Length = 716
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S +S ++ P++LFK++ +G+ VGKTSF++R+ ++ F TVG+D+ +K V D
Sbjct: 518 SKEESTSSTPDRLFKIVFVGNSAVGKTSFLRRFCEDRFSPGMVATVGIDYQVKTVNVDDS 577
Query: 118 QKIKLQLWDIAGQ 130
Q + LQLWD AGQ
Sbjct: 578 Q-VALQLWDTAGQ 589
>gi|440548636|gb|AGC10823.1| Rab-3 [Eriocheir sinensis]
Length = 209
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R+ +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
+KS++A LFK+++IGD VGKT + RYV+ +F + T+G+DF +K ++ + +K
Sbjct: 3 KKSYDA----LFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIEL-EGKK 57
Query: 120 IKLQLWDIAGQ 130
IKLQ+WD AGQ
Sbjct: 58 IKLQIWDTAGQ 68
>gi|262527293|ref|NP_001161078.1| ras-related protein Rab-35 isoform 2 [Homo sapiens]
gi|332840549|ref|XP_003314009.1| PREDICTED: ras-related protein Rab-35 isoform 2 [Pan troglodytes]
gi|119618570|gb|EAW98164.1| RAB35, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|194388036|dbj|BAG65402.1| unnamed protein product [Homo sapiens]
Length = 152
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|324519987|gb|ADY47533.1| Ras-related protein Rab-35 [Ascaris suum]
Length = 205
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ + + Q++KLQ+WD
Sbjct: 11 DHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTITI-NGQRVKLQIWDT 69
Query: 128 AGQ 130
AGQ
Sbjct: 70 AGQ 72
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + RY + F + K T+GV+FA K +K +D++ +K Q+WD AG
Sbjct: 13 LFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDKKVVKAQIWDTAG 72
Query: 130 Q 130
Q
Sbjct: 73 Q 73
>gi|383422247|gb|AFH34337.1| EF-hand calcium-binding domain-containing protein 4B isoform a
[Macaca mulatta]
Length = 731
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K ++P P++LFK++ +G+ VG
Sbjct: 500 VSDQGAQGQIQEA--PPLKLTPTSPRGQPVGKEAVCKEESSPSAPDRLFKIVFVGNSAVG 557
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ + F TVG+D+ +K V D Q + LQLWD AGQ
Sbjct: 558 KTSFLRRFCEGRFSPGMAATVGIDYRVKTVNVDDSQ-VALQLWDTAGQ 604
>gi|380025950|ref|XP_003696725.1| PREDICTED: ras-related protein Rab-43-like [Apis florea]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 20 LFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTV-LIDDKKVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|268531330|ref|XP_002630791.1| C. briggsae CBR-RAB-3 protein [Caenorhabditis briggsae]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
+ LFK +++GD VGKT+ + R+ +N F D K T+GVDFA K + D + +K QLW
Sbjct: 6 THDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINV-DNKVVKAQLW 64
Query: 126 DIAGQN 131
D AGQ+
Sbjct: 65 DTAGQD 70
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +NTF D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 18 LFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQV-DTKTIKAQIWDTAG 76
Query: 130 Q 130
Q
Sbjct: 77 Q 77
>gi|224071962|ref|XP_002199537.1| PREDICTED: ras-related protein Rab-35 [Taeniopygia guttata]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|157112793|ref|XP_001651875.1| ras-related protein Rab-3C, putative [Aedes aegypti]
gi|108877951|gb|EAT42176.1| AAEL006267-PA [Aedes aegypti]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 20 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|71897245|ref|NP_001025840.1| ras-related protein Rab-35 [Gallus gallus]
gi|60098357|emb|CAH65009.1| hypothetical protein RCJMB04_1b12 [Gallus gallus]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|297693159|ref|XP_002823893.1| PREDICTED: ras-related protein Rab-35 [Pongo abelii]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|391337022|ref|XP_003742873.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Metaseiulus occidentalis]
Length = 571
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
PE+LFKV+++GD VGK+S + R+ Q F + T+GVDF +K V + + + LQLWD
Sbjct: 382 PERLFKVVIVGDSAVGKSSLINRFCQGQFVPSFNATIGVDFRVKSVT-VEGRPVALQLWD 440
Query: 127 IAGQ 130
AGQ
Sbjct: 441 TAGQ 444
>gi|54696902|gb|AAV38823.1| RAB35, member RAS oncogene family [synthetic construct]
gi|54696908|gb|AAV38826.1| RAB35, member RAS oncogene family [synthetic construct]
gi|60830162|gb|AAX36914.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365974|gb|AAX42793.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365979|gb|AAX42794.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61370750|gb|AAX43546.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|399163141|gb|AFP33146.1| rab-3, partial [Caenorhabditis elegans]
Length = 218
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|29841146|gb|AAP06159.1| similar to NM_078963 GTP-binding protein rab3A in Drosophila
melanogaster [Schistosoma japonicum]
gi|226480624|emb|CAX73409.1| Rab-protein 8 [Schistosoma japonicum]
Length = 216
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ R + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R
Sbjct: 1 MSQTRDATDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI-FR 59
Query: 116 DQQKIKLQLWDIAGQ 130
+++KLQ+WD AGQ
Sbjct: 60 QDKRVKLQIWDTAGQ 74
>gi|71982452|ref|NP_001021974.1| Protein RAB-3, isoform b [Caenorhabditis elegans]
gi|55976564|sp|Q94986.1|RAB3_CAEEL RecName: Full=Ras-related protein Rab-3
gi|1619869|gb|AAB16980.1| RAB-3 [Caenorhabditis elegans]
gi|1619871|gb|AAB16981.1| RAB-3, partial [Caenorhabditis elegans]
gi|40788400|dbj|BAD07033.1| Rab3 [Caenorhabditis elegans]
gi|373219016|emb|CCD65021.1| Protein RAB-3, isoform b [Caenorhabditis elegans]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|417396991|gb|JAA45529.1| Putative gtp-binding protein [Desmodus rotundus]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|327282620|ref|XP_003226040.1| PREDICTED: ras-related protein Rab-35-like [Anolis carolinensis]
gi|387017966|gb|AFJ51101.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|2689235|emb|CAA72631.1| rab3C-small GTPase-like protein [Trichinella britovi]
Length = 79
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD
Sbjct: 17 DYMFKILIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQIWDT 75
Query: 128 AGQ 130
AGQ
Sbjct: 76 AGQ 78
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
+L+ + I + LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++
Sbjct: 38 RLIDLNVIHVKMAREYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQT 97
Query: 112 VKWRDQQKIKLQLWDIAGQ 130
V D +++KLQ+WD AGQ
Sbjct: 98 VDI-DGERVKLQIWDTAGQ 115
>gi|221111766|ref|XP_002161131.1| PREDICTED: ras-related protein Rab-3B-like [Hydra magnipapillata]
Length = 218
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 53 LVRVPSIRKSFNAPPEK----LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
+ V S R P ++ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF
Sbjct: 1 MAAVSSDRHRSKDPADQNFDYMFKLLIIGNSSVGKTSFLFRYSDDSFTSAFVSTVGIDFK 60
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ V +R+ ++IKLQ+WD AGQ
Sbjct: 61 VQTV-FRNDKRIKLQIWDTAGQ 81
>gi|60824864|gb|AAX36697.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|358253639|dbj|GAA53548.1| Ras-related protein Rab-39B [Clonorchis sinensis]
Length = 224
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
F++IVIGD VGK+SF++ +V+ F TVGVDF +IV+ R + +KLQLWD AGQ
Sbjct: 9 FRLIVIGDSMVGKSSFLRTFVEGNFSNVCDPTVGVDFYSRIVRIRSDKYVKLQLWDTAGQ 68
>gi|410332879|gb|JAA35386.1| EF-hand calcium binding domain 4B [Pan troglodytes]
Length = 732
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKLVRVP---------SIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL ++RK ++P P++LFK++ +G+ VG
Sbjct: 501 VSDQGVQGQIPEA--PPLKLTPTSPRGQPIGKEALRKEESSPSAPDRLFKIVFVGNSAVG 558
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 559 KTSFLRRLCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 605
>gi|410295998|gb|JAA26599.1| EF-hand calcium binding domain 4B [Pan troglodytes]
Length = 731
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKLVRVP---------SIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL ++RK ++P P++LFK++ +G+ VG
Sbjct: 500 VSDQGVQGQIPEA--PPLKLTPTSPRGQPIGKEALRKEESSPSAPDRLFKIVFVGNSAVG 557
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 558 KTSFLRRLCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 604
>gi|410252630|gb|JAA14282.1| EF-hand calcium binding domain 4B [Pan troglodytes]
Length = 732
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKLVRVP---------SIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL ++RK ++P P++LFK++ +G+ VG
Sbjct: 501 VSDQGVQGQIPEA--PPLKLTPTSPRGQPIGKEALRKEESSPSAPDRLFKIVFVGNSAVG 558
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 559 KTSFLRRLCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 605
>gi|410210168|gb|JAA02303.1| EF-hand calcium binding domain 4B [Pan troglodytes]
Length = 732
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKLVRVP---------SIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL ++RK ++P P++LFK++ +G+ VG
Sbjct: 501 VSDQGVQGQIPEA--PPLKLTPTSPRGQPIGKEALRKEESSPSAPDRLFKIVFVGNSAVG 558
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 559 KTSFLRRLCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 605
>gi|332838318|ref|XP_003313482.1| PREDICTED: LOW QUALITY PROTEIN: EF-hand calcium-binding
domain-containing protein 4B [Pan troglodytes]
Length = 733
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKLVRVP---------SIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL ++RK ++P P++LFK++ +G+ VG
Sbjct: 502 VSDQGVQGQIPEA--PPLKLTPTSPRGQPIGKEALRKEESSPSAPDRLFKIVFVGNSAVG 559
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 560 KTSFLRRLCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 606
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|5803135|ref|NP_006852.1| ras-related protein Rab-35 isoform 1 [Homo sapiens]
gi|37718983|ref|NP_937806.1| ras-related protein Rab-35 [Mus musculus]
gi|61556789|ref|NP_001013064.1| ras-related protein Rab-35 [Rattus norvegicus]
gi|148229407|ref|NP_001091596.1| ras-related protein Rab-35 [Bos taurus]
gi|302565752|ref|NP_001181695.1| ras-related protein Rab-35 [Macaca mulatta]
gi|343168793|ref|NP_001230220.1| ras-related protein Rab-35 [Sus scrofa]
gi|332840547|ref|XP_003314008.1| PREDICTED: ras-related protein Rab-35 isoform 1 [Pan troglodytes]
gi|390468242|ref|XP_002753117.2| PREDICTED: ras-related protein Rab-35 [Callithrix jacchus]
gi|3024525|sp|Q15286.1|RAB35_HUMAN RecName: Full=Ras-related protein Rab-35; AltName: Full=GTP-binding
protein RAY; AltName: Full=Ras-related protein Rab-1C
gi|62900797|sp|Q5U316.1|RAB35_RAT RecName: Full=Ras-related protein Rab-35
gi|62901088|sp|Q6PHN9.1|RAB35_MOUSE RecName: Full=Ras-related protein Rab-35
gi|20379096|gb|AAM21108.1|AF498960_1 small GTP binding protein RAB35 [Homo sapiens]
gi|763122|emb|CAA56177.1| ray [Homo sapiens]
gi|3970972|gb|AAC83182.1| GTP-binding protein H-ray [Homo sapiens]
gi|16198501|gb|AAH15931.1| RAB35, member RAS oncogene family [Homo sapiens]
gi|33990612|gb|AAH56466.1| RAB35, member RAS oncogene family [Mus musculus]
gi|49168460|emb|CAG38725.1| RAB35 [Homo sapiens]
gi|49456327|emb|CAG46484.1| RAB35 [Homo sapiens]
gi|54696910|gb|AAV38827.1| RAB35, member RAS oncogene family [Homo sapiens]
gi|55250410|gb|AAH85769.1| RAB35, member RAS oncogene family [Rattus norvegicus]
gi|60818474|gb|AAX36466.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61356141|gb|AAX41213.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61361052|gb|AAX41980.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61362982|gb|AAX42313.1| RAB35 member RAS oncogene family [synthetic construct]
gi|74140038|dbj|BAE33762.1| unnamed protein product [Mus musculus]
gi|112293031|dbj|BAF02893.1| Rab35 [Mus musculus]
gi|119618569|gb|EAW98163.1| RAB35, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123994149|gb|ABM84676.1| RAB35, member RAS oncogene family [synthetic construct]
gi|124126861|gb|ABM92203.1| RAB35, member RAS oncogene family [synthetic construct]
gi|124126895|gb|ABM92220.1| RAB35, member RAS oncogene family [synthetic construct]
gi|146186509|gb|AAI40522.1| RAB35 protein [Bos taurus]
gi|148687899|gb|EDL19846.1| RAB35, member RAS oncogene family [Mus musculus]
gi|149063543|gb|EDM13866.1| rCG21356 [Rattus norvegicus]
gi|189069099|dbj|BAG35437.1| unnamed protein product [Homo sapiens]
gi|261860342|dbj|BAI46693.1| RAB35, member RAS oncogene family [synthetic construct]
gi|380784769|gb|AFE64260.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
gi|383415401|gb|AFH30914.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
gi|384942608|gb|AFI34909.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
Length = 201
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|125811091|ref|XP_001361745.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|194758000|ref|XP_001961250.1| GF11093 [Drosophila ananassae]
gi|195153505|ref|XP_002017666.1| GL17187 [Drosophila persimilis]
gi|54636921|gb|EAL26324.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|190622548|gb|EDV38072.1| GF11093 [Drosophila ananassae]
gi|194113462|gb|EDW35505.1| GL17187 [Drosophila persimilis]
Length = 220
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|357380732|pdb|3TW8|B Chain B, Gef Domain Of Dennd 1b In Complex With Rab Gtpase Rab35
gi|357380734|pdb|3TW8|D Chain D, Gef Domain Of Dennd 1b In Complex With Rab Gtpase Rab35
Length = 181
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD
Sbjct: 7 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|440297914|gb|ELP90555.1| hypothetical protein EIN_019940 [Entamoeba invadens IP1]
Length = 204
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
NA + FKV++IG+ VGKT+ ++RY N F + TVGVDF K D +KIK+Q
Sbjct: 6 NAQCDYTFKVLIIGESGVGKTAVLERYCDNVFNESLLSTVGVDFKAKYFTI-DSKKIKVQ 64
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 65 LWDTAGQ 71
>gi|432876709|ref|XP_004073074.1| PREDICTED: ras-related protein Rab-28-like [Oryzias latipes]
Length = 221
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+K K++V+GD GKTS R+ Q +F K YK T+G+DF LK + Q + LQ+WDI
Sbjct: 10 DKQLKIVVVGDGACGKTSLATRFAQESFGKQYKQTIGLDFFLKRISLPGNQNVTLQVWDI 69
Query: 128 AGQ 130
GQ
Sbjct: 70 GGQ 72
>gi|312373301|gb|EFR21066.1| hypothetical protein AND_17638 [Anopheles darlingi]
Length = 189
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 56 VPSIRKSFNAPPEK---------------LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYK 100
+ SI++S + PE LFKV+++G+ VGKT V+R+ Q F
Sbjct: 14 LHSIKESIDRCPESQLLRAGSKQMEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQG 73
Query: 101 GTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
T+GVDF +K V+ D QKIKLQ+WD AGQ
Sbjct: 74 ATIGVDFMIKTVEV-DNQKIKLQIWDTAGQ 102
>gi|195383704|ref|XP_002050566.1| GJ20130 [Drosophila virilis]
gi|194145363|gb|EDW61759.1| GJ20130 [Drosophila virilis]
Length = 220
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|56790128|dbj|BAD82860.1| small GTPase EhRabX12 [Entamoeba histolytica]
Length = 233
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 52 KLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKI 111
K ++ +I N+ L KV++IGD +VGKTS + RY +TF Y T+GVDF +
Sbjct: 26 KYIKKSNILNKLNSRDVILLKVLLIGDISVGKTSLLLRYCDSTFSTTYITTIGVDFKVAT 85
Query: 112 VKWRDQQKIKLQLWDIAG 129
+K R+ + IK+Q+WD AG
Sbjct: 86 MK-RNGRTIKMQIWDTAG 102
>gi|31210411|ref|XP_314172.1| AGAP005255-PA [Anopheles gambiae str. PEST]
gi|30176728|gb|EAA09493.2| AGAP005255-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|347967168|ref|XP_320947.5| AGAP002092-PA [Anopheles gambiae str. PEST]
gi|333469728|gb|EAA01022.5| AGAP002092-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+++G+ VGKT V+R+ Q F T+GVDF +K V+ D QKIKLQ+WD AG
Sbjct: 7 LFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEV-DNQKIKLQIWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|72017227|ref|XP_791019.1| PREDICTED: ras-related protein Rab-23-like isoform 2
[Strongylocentrotus purpuratus]
gi|390359535|ref|XP_003729499.1| PREDICTED: ras-related protein Rab-23-like isoform 1
[Strongylocentrotus purpuratus]
Length = 233
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E KV+++G+ VGK+S +QRY + F KDYK T+GVDF + +++ D+ ++L LWD
Sbjct: 7 EVAIKVVIVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEFNDED-VRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|195066090|ref|XP_001996775.1| GH24197 [Drosophila grimshawi]
gi|193892005|gb|EDV90871.1| GH24197 [Drosophila grimshawi]
Length = 220
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|440297920|gb|ELP90561.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K+IVIG+P VGKTS +++Y F + Y+ T+GVDFA+K+ D + ++L+LWDIAGQ
Sbjct: 10 LKIIVIGEPNVGKTSTIRKYCHGVFDQLYRPTIGVDFAVKMTTV-DDKDVELRLWDIAGQ 68
>gi|56757515|gb|AAW26922.1| SJCHGC02777 protein [Schistosoma japonicum]
Length = 205
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
FN P K FK++ +G+ +VGKTS + R++ +TF+ Y+ T+G+DF K + D + I+L
Sbjct: 4 FNNPLRK-FKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLED-RTIRL 61
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 62 QLWDTAGQ 69
>gi|17737457|ref|NP_523687.1| Rab3 [Drosophila melanogaster]
gi|194884193|ref|XP_001976180.1| GG22724 [Drosophila erecta]
gi|195333207|ref|XP_002033283.1| GM20500 [Drosophila sechellia]
gi|195483658|ref|XP_002090378.1| GE13081 [Drosophila yakuba]
gi|131800|sp|P25228.1|RAB3_DROME RecName: Full=Ras-related protein Rab-3
gi|158193|gb|AAA28843.1| rab3 [Drosophila melanogaster]
gi|7303712|gb|AAF58762.1| Rab3 [Drosophila melanogaster]
gi|16648446|gb|AAL25488.1| LP05860p [Drosophila melanogaster]
gi|40788408|dbj|BAD07037.1| Rab3 [Drosophila melanogaster]
gi|190659367|gb|EDV56580.1| GG22724 [Drosophila erecta]
gi|194125253|gb|EDW47296.1| GM20500 [Drosophila sechellia]
gi|194176479|gb|EDW90090.1| GE13081 [Drosophila yakuba]
gi|220947366|gb|ACL86226.1| Rab3-PA [synthetic construct]
gi|220956828|gb|ACL90957.1| Rab3-PA [synthetic construct]
Length = 220
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F +D K T+GV+FA + +++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEF-DGKTIKSQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|196010960|ref|XP_002115344.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
gi|190582115|gb|EDV22189.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
Length = 207
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ N F+ Y T+GVDF ++ ++ D Q+IKLQ+WD
Sbjct: 7 DHLFKLLIIGDSGVGKSSILLRFADNLFQGTYITTIGVDFKIRTIEV-DGQRIKLQIWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGKTS + R+ ++ F Y T+G+DF +K ++ R ++IKLQ+WD AG
Sbjct: 8 LFKLLLIGDSGVGKTSIIHRFTEDAFSPTYISTIGIDFKIKTIEVRG-KRIKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|226478096|emb|CAX72741.1| RAB family [Schistosoma japonicum]
gi|226478548|emb|CAX72769.1| RAB family [Schistosoma japonicum]
gi|257206356|emb|CAX82829.1| RAB family [Schistosoma japonicum]
gi|257206638|emb|CAX82947.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
FN P K FK++ +G+ +VGKTS + R++ +TF+ Y+ T+G+DF K + D + I+L
Sbjct: 4 FNNPLRK-FKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLED-RTIRL 61
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 62 QLWDTAGQ 69
>gi|410922303|ref|XP_003974622.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|326667537|ref|XP_001334079.4| PREDICTED: ras-related protein Rab-35-like, partial [Danio rerio]
Length = 182
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|255721801|ref|XP_002545835.1| GTP-binding protein ryh1 [Candida tropicalis MYA-3404]
gi|240136324|gb|EER35877.1| GTP-binding protein ryh1 [Candida tropicalis MYA-3404]
Length = 215
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + I+LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|195120790|ref|XP_002004904.1| GI20173 [Drosophila mojavensis]
gi|193909972|gb|EDW08839.1| GI20173 [Drosophila mojavensis]
Length = 220
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|50286745|ref|XP_445802.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525108|emb|CAG58721.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A + + KVI++GD VGKTS + RYV + + + YK T+G DF K V D + + +Q+
Sbjct: 3 ARKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVVTMQV 62
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 63 WDTAGQ 68
>gi|119604594|gb|EAW84188.1| RAB3D, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 158
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++
Sbjct: 12 RDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKR 70
Query: 120 IKLQLWDIAGQ 130
IKLQ+WD AGQ
Sbjct: 71 IKLQIWDTAGQ 81
>gi|240974176|ref|XP_002401800.1| zinc finger protein, putative [Ixodes scapularis]
gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis]
gi|442756045|gb|JAA70182.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 199
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ ++ D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEV-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|99032489|pdb|2GF9|A Chain A, Crystal Structure Of Human Rab3d In Complex With Gdp
Length = 189
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD
Sbjct: 19 SDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWD 77
Query: 127 IAGQ 130
AGQ
Sbjct: 78 TAGQ 81
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|224043799|ref|XP_002191554.1| PREDICTED: ras and EF-hand domain-containing protein-like
[Taeniopygia guttata]
Length = 708
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S + N+ PE+LFK++ +G+ +VGKTSF++R+ ++ F TVGVD+ ++ V D
Sbjct: 508 SNEERINSVPERLFKIVFVGNSSVGKTSFLRRFCEDRFFPGTAATVGVDYNVRTVT-VDH 566
Query: 118 QKIKLQLWDIAGQ 130
++ LQLWD AGQ
Sbjct: 567 TQVALQLWDTAGQ 579
>gi|167387855|ref|XP_001738336.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898510|gb|EDR25350.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KV+++G+ +VGKTS QRY+ NTF+ Y +VGVDF K + +D + I+LQ+WD AGQ
Sbjct: 13 KVLLLGESSVGKTSITQRYIDNTFEDIYLSSVGVDFKFKEIT-KDNELIRLQIWDTAGQ 70
>gi|167395260|ref|XP_001741296.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894193|gb|EDR22255.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 207
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
IRK N LFK+I++GD VGKTS + +YV F YK T+G DF K + DQQ
Sbjct: 4 IRKKRN-----LFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQ 58
Query: 119 KIKLQLWDIAGQ 130
I LQ+WD AG
Sbjct: 59 -ISLQIWDTAGH 69
>gi|427787091|gb|JAA58997.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 200
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ ++ D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEV-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 13 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|348528226|ref|XP_003451619.1| PREDICTED: ras-related protein Rab-33B-like [Oreochromis niloticus]
Length = 234
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S ++ ++FK+IVIGD VGKT R+ TF K+ + T+GVDF + ++ D
Sbjct: 24 SSHHEYDTTHARIFKIIVIGDSNVGKTCLTYRFCGGTFLKNPEATIGVDFRERTLEL-DG 82
Query: 118 QKIKLQLWDIAGQ 130
+ IKLQ+WD AGQ
Sbjct: 83 ESIKLQIWDTAGQ 95
>gi|195429579|ref|XP_002062835.1| GK19661 [Drosophila willistoni]
gi|194158920|gb|EDW73821.1| GK19661 [Drosophila willistoni]
Length = 220
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD AG
Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|225706608|gb|ACO09150.1| Ras-related protein Rab-35 [Osmerus mordax]
gi|225717328|gb|ACO14510.1| Ras-related protein Rab-35 [Esox lucius]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK+++IGD VGK+S + RY + F+ T+GVDF +K+V D KIKL +WD AGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAGQ 71
>gi|340376610|ref|XP_003386825.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P + FK++ +G+ VGKTS + R++ +TF +Y+ T+G+DF K + + D + ++LQLWD
Sbjct: 6 PMRKFKIVFLGEEAVGKTSIITRFMYDTFDSNYQATIGIDFLAKTM-YLDDRTVRLQLWD 64
Query: 127 IAGQ 130
AGQ
Sbjct: 65 TAGQ 68
>gi|193652503|ref|XP_001951946.1| PREDICTED: ras-related protein Rab-35-like [Acyrthosiphon pisum]
Length = 202
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V D +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLVRFADNTFSGSYITTIGVDFKIRTV-IVDGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|67483055|ref|XP_656820.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978604|dbj|BAD34969.1| EhRab7B protein [Entamoeba histolytica]
gi|56474045|gb|EAL51436.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407044644|gb|EKE42730.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449708173|gb|EMD47684.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
IRK N LFK+I++GD VGKTS + +YV F YK T+G DF K + DQQ
Sbjct: 4 IRKKRN-----LFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQ 58
Query: 119 KIKLQLWDIAGQ 130
I LQ+WD AG
Sbjct: 59 -ISLQIWDTAGH 69
>gi|432950660|ref|XP_004084550.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|353232639|emb|CCD79994.1| putative rab 3 and [Schistosoma mansoni]
Length = 171
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 60 RKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQK 119
R + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R ++
Sbjct: 5 RDATDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI-FRQDKR 63
Query: 120 IKLQLWDIAGQ 130
+KLQ+WD AGQ
Sbjct: 64 VKLQIWDTAGQ 74
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P ++FK+I+IG+ VGKTS + RYV+N+F YK T+G DF K V++ + + LQ+WD
Sbjct: 3 PVQMFKIILIGESGVGKTSLINRYVENSFDPVYKSTIGCDFLSKNVQYEGVEYV-LQIWD 61
Query: 127 IAGQ 130
AG
Sbjct: 62 TAGH 65
>gi|429962854|gb|ELA42398.1| small GTP-binding protein domain protein [Vittaforma corneae ATCC
50505]
Length = 211
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGKT+ + R V++ F + K T+GVDFA K K+ IK+QLWD AG
Sbjct: 12 LFKIVIIGDANVGKTNIISRLVRDEFIEHSKSTIGVDFATKTFKF-GSSSIKVQLWDTAG 70
Query: 130 Q 130
Q
Sbjct: 71 Q 71
>gi|291220854|ref|XP_002730440.1| PREDICTED: RAB family member (rab-19)-like [Saccoglossus
kowalevskii]
Length = 212
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGKT VQR+ TF + T+GVDF +K + D +K+KLQ+WD AG
Sbjct: 16 LFKIVLIGDAGVGKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLHI-DGKKVKLQVWDTAG 74
Query: 130 Q 130
Q
Sbjct: 75 Q 75
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 63 FNAPPEK--LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
F PP+K L KVI++GD VGKTS + +YV F YK T+G DF K V D +++
Sbjct: 221 FCMPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVI-DDKEV 279
Query: 121 KLQLWDIAGQ 130
+Q+WD AGQ
Sbjct: 280 TVQIWDTAGQ 289
>gi|427778911|gb|JAA54907.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 257
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ ++ D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEV-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 77 GDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
GD VGK+S + R+ NTF +Y T+GVDF ++ ++ D +++KLQ+WD AGQ
Sbjct: 72 GDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEV-DGERVKLQIWDTAGQ 124
>gi|66508944|ref|XP_624576.1| PREDICTED: ras-related protein Rab-43 [Apis mellifera]
Length = 219
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF++K + D +K+KLQ+WD AG
Sbjct: 20 LFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTI-LIDDKKVKLQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A + L KVI++GD VGKTS +Q++V N F YK T+G DF K + D + + LQ+
Sbjct: 3 ARKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDLTI-DNKTVSLQI 61
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 62 WDTAGQ 67
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 63 FNAPPEK--LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
F PP+K L KVI++GD VGKTS + +YV F YK T+G DF K V D +++
Sbjct: 221 FCMPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVI-DDKEV 279
Query: 121 KLQLWDIAGQ 130
+Q+WD AGQ
Sbjct: 280 TVQIWDTAGQ 289
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+ + R+ +T+ + Y T+GVDF ++ ++ +DQ+ IKL
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE-QDQKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|193713749|ref|XP_001945092.1| PREDICTED: ras-related protein Rab-43-like isoform 1 [Acyrthosiphon
pisum]
gi|328718639|ref|XP_003246535.1| PREDICTED: ras-related protein Rab-43-like isoform 2 [Acyrthosiphon
pisum]
Length = 235
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ T+ ++ T+GVDF++K +K D +K+KLQ+WD AG
Sbjct: 37 LFKIVLIGDCGTGKTCVVQRFKSGTYAENQGNTIGVDFSMKTIKI-DGKKVKLQIWDTAG 95
Query: 130 Q 130
Sbjct: 96 H 96
>gi|60602332|gb|AAX27623.1| unknown [Schistosoma japonicum]
Length = 170
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ R + + + +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K + +R
Sbjct: 1 MSQTRDATDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI-FR 59
Query: 116 DQQKIKLQLWDIAGQ 130
+++KLQ+WD AGQ
Sbjct: 60 QDKRVKLQIWDTAGQ 74
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDI-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|224050100|ref|XP_002195228.1| PREDICTED: ras-related protein Rab-28 [Taeniopygia guttata]
Length = 222
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P++ K++V+GD T GKTS R+ Q TF K YK T+G+DF LK + + LQ+W
Sbjct: 9 SPDRQLKLVVLGDGTTGKTSLATRFAQETFGKQYKQTLGLDFFLKRILLPGNLNVTLQVW 68
Query: 126 DIAGQ 130
D+ GQ
Sbjct: 69 DVGGQ 73
>gi|195582250|ref|XP_002080941.1| GD25963 [Drosophila simulans]
gi|194192950|gb|EDX06526.1| GD25963 [Drosophila simulans]
Length = 115
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R +++KLQ+WD
Sbjct: 19 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDT 77
Query: 128 AGQ 130
AGQ
Sbjct: 78 AGQ 80
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
++ +F+ + LFK ++IGD VGK++ + R+ ++ F+ D K T+GV+FA + +K RD+
Sbjct: 2 AVADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 61
Query: 118 QKIKLQLWDIAGQ 130
IK Q+WD AGQ
Sbjct: 62 L-IKAQIWDTAGQ 73
>gi|410927328|ref|XP_003977101.1| PREDICTED: ras-related protein Rab-33B-like [Takifugu rubripes]
Length = 241
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P ++FK+IVIGD VGKT R+ F + + T+GVDF ++V+ D +KIK+QLW
Sbjct: 22 PRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPEKTEATIGVDFRERLVEI-DGEKIKIQLW 80
Query: 126 DIAGQ 130
D AGQ
Sbjct: 81 DTAGQ 85
>gi|31199429|ref|XP_308662.1| AGAP007096-PA [Anopheles gambiae str. PEST]
gi|21291806|gb|EAA03951.1| AGAP007096-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ F + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 21 LFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVSV-DGKKVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDI-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|340386562|ref|XP_003391777.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P + FK++ +G+ VGKTS + R++ +TF +Y+ T+G+DF K + + D + ++LQLWD
Sbjct: 6 PMRKFKIVFLGEEAVGKTSIITRFMYDTFDSNYQATIGIDFLAKTM-YLDDRMVRLQLWD 64
Query: 127 IAGQ 130
AGQ
Sbjct: 65 TAGQ 68
>gi|383866229|ref|XP_003708573.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 140
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDI-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|56757031|gb|AAW26687.1| SJCHGC02776 protein [Schistosoma japonicum]
gi|257206208|emb|CAX82755.1| RAB family [Schistosoma japonicum]
Length = 203
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
FN P K FK++ +G+ +VGKTS + R++ +TF+ Y+ T+G+DF K + D + I+L
Sbjct: 4 FNNPLRK-FKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLED-RTIRL 61
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 62 QLWDTAGQ 69
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D ++IK Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
++ +F+ + LFK ++IGD VGK++ + R+ ++ F+ D K T+GV+FA + +K RD+
Sbjct: 2 AVADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 61
Query: 118 QKIKLQLWDIAGQ 130
IK Q+WD AGQ
Sbjct: 62 L-IKAQIWDTAGQ 73
>gi|431892136|gb|ELK02583.1| EF-hand calcium-binding domain-containing protein 4B [Pteropus
alecto]
Length = 727
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 34 IVSEQGDGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
+ S+Q +G+I + L+L V ++ K +P P++LFK++ +G+ VG
Sbjct: 494 VSSQQVEGQIQQAQPSQLELTPTSPRGQPVGKEALSKEEESPSTPDRLFKIVFVGNSAVG 553
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ ++ F TVG+D+ +K V+ D Q + LQLWD AGQ
Sbjct: 554 KTSFLRRFCEDQFSPGLTATVGIDYRVKTVRVDDSQ-VALQLWDTAGQ 600
>gi|117422554|gb|ABK34900.1| Rbj-like protein, partial [Blastocladiella emersonii]
Length = 253
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
A P +KV+V+GDP GK+ ++RY + F Y T+G+D+ L++V ++IK+
Sbjct: 62 ADPTPRYKVVVVGDPAAGKSCLIRRYCERRFTASYISTIGIDYGLRVVDLAPGRQIKINF 121
Query: 125 WDIAG 129
WD+AG
Sbjct: 122 WDMAG 126
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 36 SEQGDGEIIEIIDPSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTF 95
S +G + ++ P+L L F++ + LFK+++IGD VGK+S + R+ +T+
Sbjct: 5 SNEGGQDQLDPRHPTLSLCSASHYLILFHS--DYLFKLLLIGDSGVGKSSLLLRFADDTY 62
Query: 96 KKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+ Y T+GVDF ++ ++ D + IKLQ+WD AGQ
Sbjct: 63 TESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQ 96
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+V+ FK D K T+GV+FA K V + + K Q+WD AG
Sbjct: 10 LFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D ++IK Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ +N F + K T+GV+FA K + Q +K+Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQIWDTAG 72
Query: 130 Q 130
Q
Sbjct: 73 Q 73
>gi|340383295|ref|XP_003390153.1| PREDICTED: GTP-binding protein ypt2-like [Amphimedon queenslandica]
Length = 192
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ ++K++VIGD +VGKT+ + R+V++ + ++ TVG+D+ KIVK +++KLQ+WD
Sbjct: 23 DSIYKMLVIGDSSVGKTTLLTRFVEDKYHSNFMSTVGIDYKTKIVKM-GSERVKLQIWDT 81
Query: 128 AGQ 130
AGQ
Sbjct: 82 AGQ 84
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V D +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDV-DGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|319401899|ref|NP_001187352.1| ras-related protein Rab-35 [Ictalurus punctatus]
gi|308322789|gb|ADO28532.1| ras-related protein rab-35 [Ictalurus punctatus]
Length = 201
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V+ + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D ++IK Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|449273525|gb|EMC83019.1| Ras-related protein Rab-28 [Columba livia]
Length = 222
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P++ K++V+GD T GKTS R+ Q TF K YK T+G+DF LK + + LQ+WD
Sbjct: 10 PDRQLKLVVLGDGTTGKTSLAMRFAQETFGKQYKQTMGLDFFLKRIILPGNLNVTLQVWD 69
Query: 127 IAGQ 130
+ GQ
Sbjct: 70 VGGQ 73
>gi|545391|gb|AAB29895.1| Rab3D [Rattus sp.]
Length = 67
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ +FK+++IG+ +VGKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD
Sbjct: 5 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|241951752|ref|XP_002418598.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223641937|emb|CAX43901.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V + F YK T+G DF K + + + + LQ+WD AG
Sbjct: 9 LLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITIDNNKSVTLQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 47 IDPSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVD 106
ID LVRV + N + LFK+++IGD VGK+ + R+ +++ + Y T+GVD
Sbjct: 6 IDAKYCLVRVIA-----NCRRDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVD 60
Query: 107 FALKIVKWRDQQKIKLQLWDIAGQ 130
F ++ V+ +D + IKLQ+WD AGQ
Sbjct: 61 FKIRTVE-QDGKTIKLQIWDTAGQ 83
>gi|68482406|ref|XP_714835.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436432|gb|EAK95794.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 217
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V + F YK T+G DF K + + + + LQ+WD AG
Sbjct: 10 LLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|66819641|ref|XP_643480.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75017350|sp|Q8MXQ2.2|RB32C_DICDI RecName: Full=Ras-related protein Rab-32C
gi|60471632|gb|EAL69588.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K++V+G GKTS +QRY N F+ YK T+GVDF K+++ QK+ LQLWDIAGQ
Sbjct: 29 LKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMG-QKVLLQLWDIAGQ 87
>gi|238883588|gb|EEQ47226.1| GTP-binding protein YPT7 [Candida albicans WO-1]
Length = 217
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V + F YK T+G DF K + + + + LQ+WD AG
Sbjct: 10 LLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|403338085|gb|EJY68271.1| hypothetical protein OXYTRI_11214 [Oxytricha trifallax]
Length = 216
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IGD +VGK+ + +Y++N F + K T+GV+F +K ++ D Q IK+Q+WD AG
Sbjct: 13 LFKYIIIGDTSVGKSCILHQYLRNKFNSNSKHTIGVEFGMKYLRVND-QIIKIQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|241958896|ref|XP_002422167.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223645512|emb|CAX40171.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 219
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + I+LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|395743819|ref|XP_002822827.2| PREDICTED: ras and EF-hand domain-containing protein-like [Pongo
abelii]
Length = 722
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K ++P P++LFK++ +G+ VG
Sbjct: 491 VSDQGVQGKIPEA--PPLKLTPTSPREQPVGKEALYKEESSPSAPDRLFKIVFVGNSAVG 548
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ ++ F TVG+D+ +K + D Q + LQLWD AGQ
Sbjct: 549 KTSFLRRFCEDRFSPGMAATVGIDYRVKTLNVDDSQ-VALQLWDTAGQ 595
>gi|68485957|ref|XP_713097.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46434574|gb|EAK93979.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 224
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + I+LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGKT+ + R+ +N F + K T+GV+FA + ++ DQ+ IK Q+WD AG
Sbjct: 10 LFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKMIKAQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|348510173|ref|XP_003442620.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 209
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
LFK+++IGD VGK+S + R+ N+F Y T+GVDF ++ V D +++KLQ+WD A
Sbjct: 8 HLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVDI-DGERVKLQIWDTA 66
Query: 129 GQ 130
GQ
Sbjct: 67 GQ 68
>gi|167384556|ref|XP_001737005.1| GTP-binding protein YPTM2 [Entamoeba dispar SAW760]
gi|165900423|gb|EDR26744.1| GTP-binding protein YPTM2, putative [Entamoeba dispar SAW760]
Length = 206
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK+++IG+ VGKT+ ++RY +N F + T+GVDF +I+ ++ + +KLQLWD AGQ
Sbjct: 15 FKILIIGESAVGKTAILERYCENEFHDELISTIGVDFKSRIINYQG-KTVKLQLWDTAGQ 73
>gi|402581996|gb|EJW75943.1| hypothetical protein WUBG_13149, partial [Wuchereria bancrofti]
Length = 83
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD GK+ + R+ +N+F++D+ T+GVDF LK VK + KI+L+LWD AG
Sbjct: 13 LFKIVIVGDHNCGKSCILLRFAENSFRQDHITTLGVDFKLKTVKL-GRDKIRLELWDTAG 71
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+ + R+ + +F + T+GVDF +K +++ D + +KLQ+WD AG
Sbjct: 9 LFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKLQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+V+ FK D K T+GV+FA K V ++ + K Q+WD AG
Sbjct: 9 LFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQIWDTAG 68
Query: 130 Q 130
Q
Sbjct: 69 Q 69
>gi|549813|sp|P36864.1|YPTV5_VOLCA RecName: Full=GTP-binding protein yptV5
gi|409168|gb|AAA34254.1| GTP-binding protein [Volvox carteri]
Length = 205
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
++ K+I++GD VGKTS + +YVQ F K+YK T+G DF K ++ D +K+ +Q+WD A
Sbjct: 7 RVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEV-DDKKVTMQIWDTA 65
Query: 129 GQ 130
GQ
Sbjct: 66 GQ 67
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D ++IK Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|225438533|ref|XP_002279477.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|296082518|emb|CBI21523.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
AP L KVIV+GD VGKTS + +YV F + YK T+G DF K ++ D + + LQL
Sbjct: 3 APRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQI-DDKLVTLQL 61
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 62 WDTAGQ 67
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF +K V D ++IKLQ+WD AG
Sbjct: 23 LFKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLI-DGKRIKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|68486004|ref|XP_713074.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46434549|gb|EAK93955.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 219
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + I+LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+S + R+ +T+ DY T+GVDF ++ ++ D + IKL
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIEL-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|258573301|ref|XP_002540832.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
gi|237901098|gb|EEP75499.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
Length = 210
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 57 PSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRD 116
PS S++ P +K FK++ +G+ +VGKTS + R++ ++F Y+ T+G+DF K + + D
Sbjct: 5 PSAVGSYSNPLKK-FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTM-YLD 62
Query: 117 QQKIKLQLWDIAGQ 130
+ ++LQLWD AGQ
Sbjct: 63 DRTVRLQLWDTAGQ 76
>gi|223649372|gb|ACN11444.1| Ras-related protein Rab-35 [Salmo salar]
Length = 211
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
LFK+++IGD VGK+S + R+ N+F Y T+GVDF ++ V D +++KLQ+WD A
Sbjct: 10 HLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVDI-DGERVKLQIWDTA 68
Query: 129 GQ 130
GQ
Sbjct: 69 GQ 70
>gi|157117562|ref|XP_001658827.1| ras-related protein, putative [Aedes aegypti]
gi|108875998|gb|EAT40223.1| AAEL008029-PA [Aedes aegypti]
Length = 231
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+FKV++IGD VGK+S + RY N F ++ T+GVDF ++ +K D+ IKLQ+WD
Sbjct: 29 HNMFKVLIIGDSGVGKSSLLLRYADNKFPLKHQITIGVDFKIRTIKINDEH-IKLQIWDT 87
Query: 128 AGQ 130
AGQ
Sbjct: 88 AGQ 90
>gi|390343455|ref|XP_794320.3| PREDICTED: ras-related protein Rab-43-like [Strongylocentrotus
purpuratus]
Length = 220
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGKT VQR+ TF + T+GVDF +K + D +K+KLQ+WD AG
Sbjct: 26 LFKIVLIGDAGVGKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLNI-DGKKVKLQVWDTAG 84
Query: 130 Q 130
Q
Sbjct: 85 Q 85
>gi|344302658|gb|EGW32932.1| hypothetical protein SPAPADRAFT_60274 [Spathaspora passalidarum
NRRL Y-27907]
Length = 215
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS +Q++V N F YK T+G DF K + + + + LQ+WD AG
Sbjct: 8 LLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIIIDNNKPVTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+++GD VGK++ + R+ +NTF D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 20 LFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQV-DGKTIKAQIWDTAG 78
Query: 130 Q 130
Q
Sbjct: 79 Q 79
>gi|238880071|gb|EEQ43709.1| GTP-binding protein ryh1 [Candida albicans WO-1]
Length = 218
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + I+LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|29841055|gb|AAP06068.1| similar to GenBank Accession Number S38340 membrane associated GTP
binding protein RAB18 in Caenorhabditis briggsae
[Schistosoma japonicum]
Length = 189
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK+++IGD VGK+S + RY + F+ T+GVDF +K+V D KIKL +WD AGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAGQ 71
>gi|344303734|gb|EGW33983.1| hypothetical protein SPAPADRAFT_59389 [Spathaspora passalidarum
NRRL Y-27907]
Length = 209
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + I+LQLWD AGQ
Sbjct: 13 YKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDTAGQ 72
>gi|340373941|ref|XP_003385498.1| PREDICTED: ras-related protein RIC1-like [Amphimedon queenslandica]
Length = 254
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L K++VIGD +VGKT + RY Q+ F++ + T+GVDF KIV+ +++ KLQLWD AG
Sbjct: 32 LAKLVVIGDSSVGKTCLILRYTQDVFRESFLPTIGVDFKSKIVE-EGEKRYKLQLWDTAG 90
Query: 130 Q 130
Q
Sbjct: 91 Q 91
>gi|147906392|ref|NP_001080036.1| RAB33B, member RAS oncogene family [Xenopus laevis]
gi|37589438|gb|AAH59345.1| MGC69157 protein [Xenopus laevis]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
SF ++FK+IVIGD VGKT R+ + F + + T+GVDF + V D ++IK
Sbjct: 24 SFGVTRARIFKIIVIGDSNVGKTCLTYRFCTSCFPERTEATIGVDFRERTVDI-DGERIK 82
Query: 122 LQLWDIAGQ 130
+QLWD AGQ
Sbjct: 83 IQLWDTAGQ 91
>gi|281200877|gb|EFA75091.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 41 GEIIEIIDP---SLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKK 97
G+ I+ D S + S+ + + L K++VIGD VGK+ + R+ N F
Sbjct: 8 GKFIDYCDEGSGSFSVTSSTSMHGESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTD 67
Query: 98 DYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
Y T+GVDF ++ ++ D ++IKLQ+WD AGQ
Sbjct: 68 SYISTIGVDFCIRTIEL-DGKRIKLQIWDTAGQ 99
>gi|226443352|ref|NP_001140109.1| Ras-related protein Rab-33B [Salmo salar]
gi|221222204|gb|ACM09763.1| Ras-related protein Rab-33B [Salmo salar]
Length = 243
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 47 IDPSLKLVRVPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVD 106
++ S++ ++ P ++FK+IVIGD VGKT R+ F + + T+GVD
Sbjct: 4 VESSMEFTSSLTVSSHLPPPRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPEKTEATIGVD 63
Query: 107 FALKIVKWRDQQKIKLQLWDIAGQ 130
F K+++ D + IK+QLWD AGQ
Sbjct: 64 FREKLIEI-DGETIKVQLWDTAGQ 86
>gi|157116294|ref|XP_001652810.1| rab 19, 41 and [Aedes aegypti]
gi|108876535|gb|EAT40760.1| AAEL007525-PA [Aedes aegypti]
Length = 219
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ F + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 21 LFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTV-DGKKVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|17550768|ref|NP_508523.1| Protein TAG-312 [Caenorhabditis elegans]
gi|74966415|sp|Q22908.2|RASEF_CAEEL RecName: Full=Ras and EF-hand domain-containing protein homolog;
Flags: Precursor
gi|373254121|emb|CCD66473.1| Protein TAG-312 [Caenorhabditis elegans]
Length = 656
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N P E+ F++++ GD VGK+SFV R ++ F T+GVDF +K V D + + LQ
Sbjct: 455 NGPAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVN-VDGRNVALQ 513
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 514 LWDTAGQ 520
>gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella vectensis]
gi|156221287|gb|EDO42144.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IGD VGK+S + R+ +TF Y T+GVDF ++ + D + IKL
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTV-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|268578667|ref|XP_002644316.1| C. briggsae CBR-TAG-312 protein [Caenorhabditis briggsae]
gi|74790193|sp|Q619T5.1|RASEF_CAEBR RecName: Full=Ras and EF-hand domain-containing protein homolog;
Flags: Precursor
Length = 634
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N P E+ F++++ GD VGK+SFV R ++ F T+GVDF +K V D + + LQ
Sbjct: 433 NGPAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVN-VDGRNVALQ 491
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 492 LWDTAGQ 498
>gi|324508005|gb|ADY43386.1| Ras and EF-hand domain-containing protein [Ascaris suum]
Length = 656
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 56 VPSIRKSF---NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIV 112
VP+ + F + PPE+ F++++ GD +VGK+S V R V+ F + T+GVDF +K
Sbjct: 446 VPNNNQGFGEADGPPERTFRIVMCGDASVGKSSIVTRIVKGVFTGNLPSTLGVDFQVKNA 505
Query: 113 KWRDQQKIKLQLWDIAGQ 130
+ D + + +QLWD AGQ
Sbjct: 506 RI-DDKNVAIQLWDTAGQ 522
>gi|308802790|ref|XP_003078708.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
gi|116057161|emb|CAL51588.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
Length = 209
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
+A L KVI++GD VGKTS + +YV N F K YK T+G DF K + D + LQ
Sbjct: 3 DARARTLLKVIILGDSGVGKTSLMSQYVNNKFSKQYKATIGADFMTKEITV-DDTVVTLQ 61
Query: 124 LWDIAGQ 130
+WD AGQ
Sbjct: 62 IWDTAGQ 68
>gi|449673442|ref|XP_004207959.1| PREDICTED: ras and EF-hand domain-containing protein homolog [Hydra
magnipapillata]
Length = 213
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P +++K++ +GD VGK+SF+ R+ N F+ ++ T+GVDF +K ++ + I LQLWD
Sbjct: 9 PNRVYKIVFVGDSGVGKSSFIYRFCHNDFRPNFSATIGVDFQVKTLEICNNW-IALQLWD 67
Query: 127 IAGQ 130
AGQ
Sbjct: 68 TAGQ 71
>gi|390358358|ref|XP_789541.3| PREDICTED: ras-related protein Rab-28-like [Strongylocentrotus
purpuratus]
Length = 224
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K K++V+GD GKTS RY Q F K Y+ TVG+DF LK + D + LQ+WDI
Sbjct: 13 KQLKIVVVGDGASGKTSLATRYSQEQFGKQYQQTVGLDFFLKRICIADNTHVSLQVWDIG 72
Query: 129 GQ 130
GQ
Sbjct: 73 GQ 74
>gi|341874611|gb|EGT30546.1| CBN-TAG-312 protein [Caenorhabditis brenneri]
Length = 632
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N P E+ F++++ GD VGK+SFV R ++ F T+GVDF +K V D + + LQ
Sbjct: 431 NGPAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVN-VDGRNVALQ 489
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 490 LWDTAGQ 496
>gi|308512109|ref|XP_003118237.1| CRE-TAG-312 protein [Caenorhabditis remanei]
gi|308238883|gb|EFO82835.1| CRE-TAG-312 protein [Caenorhabditis remanei]
Length = 650
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N P E+ F++++ GD VGK+SFV R ++ F T+GVDF +K V D + + LQ
Sbjct: 449 NGPAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVN-VDGRNVALQ 507
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 508 LWDTAGQ 514
>gi|399163173|gb|AFP33162.1| rab-45, partial [Caenorhabditis elegans]
Length = 633
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N P E+ F++++ GD VGK+SFV R ++ F T+GVDF +K V D + + LQ
Sbjct: 432 NGPAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVN-VDGRNVALQ 490
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 491 LWDTAGQ 497
>gi|147819924|emb|CAN62813.1| hypothetical protein VITISV_031882 [Vitis vinifera]
Length = 205
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
AP L KVIV+GD VGKTS + +YV F + YK T+G DF K ++ D + + LQL
Sbjct: 3 APRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQI-DDKLVTLQL 61
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 62 WDTAGQ 67
>gi|440298757|gb|ELP91388.1| GTP-binding protein YPTM2, putative [Entamoeba invadens IP1]
Length = 206
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK+++IG+ VGKT+ ++RY N F ++ T+GVDF +++ ++ + IKLQLWD AGQ
Sbjct: 15 FKILIIGESAVGKTAILERYCDNEFHEELISTIGVDFKSRVINYKG-KTIKLQLWDTAGQ 73
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D ++IK Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|115728606|ref|XP_780763.2| PREDICTED: ras-related protein Rab-35-like [Strongylocentrotus
purpuratus]
Length = 204
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ + + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTIDVKG-EKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|67475925|ref|XP_653593.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978620|dbj|BAD34977.1| EhRabC2 protein [Entamoeba histolytica]
gi|56470561|gb|EAL48205.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449705539|gb|EMD45563.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 206
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK+++IG+ VGKT+ ++RY +N F + T+GVDF +I+ ++ + +KLQLWD AGQ
Sbjct: 15 FKILIIGESAVGKTAILERYCENEFHDELISTIGVDFKSRIINYQG-KTVKLQLWDTAGQ 73
>gi|407044609|gb|EKE42710.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 206
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK+++IG+ VGKT+ ++RY +N F + T+GVDF +I+ ++ + +KLQLWD AGQ
Sbjct: 15 FKILIIGESAVGKTAILERYCENEFHDELISTIGVDFKSRIINYQG-KTVKLQLWDTAGQ 73
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|195402069|ref|XP_002059632.1| GJ14874 [Drosophila virilis]
gi|194147339|gb|EDW63054.1| GJ14874 [Drosophila virilis]
Length = 202
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK++++GD VGKT +QR+V+N F +YK TVGVD ++ V+ K+KLQ+WD AG
Sbjct: 6 VFKILMLGDAGVGKTCLLQRFVENRFTGNYKCTVGVDSKIRTVEI-SGHKVKLQIWDTAG 64
Query: 130 Q 130
+
Sbjct: 65 E 65
>gi|111226256|ref|XP_635210.2| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208508|sp|P34141.2|RABA_DICDI RecName: Full=Ras-related protein RabA; Flags: Precursor
gi|90970434|gb|EAL61600.2| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK I +GD VGK+S + R+ ++TF + Y T+GVDF +K V + + + IKLQ+WD
Sbjct: 6 EHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTV-YIEGKAIKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|260803593|ref|XP_002596674.1| hypothetical protein BRAFLDRAFT_122037 [Branchiostoma floridae]
gi|229281933|gb|EEN52686.1| hypothetical protein BRAFLDRAFT_122037 [Branchiostoma floridae]
Length = 207
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ + + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGTYITTIGVDFKIRTTEM-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|242247191|ref|NP_001156195.1| GTP-binding protein YPTM1-like [Acyrthosiphon pisum]
gi|239799251|dbj|BAH70556.1| ACYPI005808 [Acyrthosiphon pisum]
Length = 231
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E KV+++G+ VGK+S +QRY + TF +DYK T+GVDF + ++ + + ++L LWD
Sbjct: 7 EIALKVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVDFLERQIEC-NGEDVRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|156387433|ref|XP_001634208.1| predicted protein [Nematostella vectensis]
gi|156221288|gb|EDO42145.1| predicted protein [Nematostella vectensis]
Length = 115
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N+ + LFK+++IGD VGK+S + R+ +TF Y T+GVDF ++ + D + IKLQ
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLT-VDGKTIKLQ 60
Query: 124 LWDIAGQ 130
+WD AGQ
Sbjct: 61 IWDTAGQ 67
>gi|304602|gb|AAC37382.1| RabA, partial [Dictyostelium discoideum]
gi|739976|prf||2004272C rabA gene
Length = 199
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK I +GD VGK+S + R+ ++TF + Y T+GVDF +K V + + + IKLQ+WD
Sbjct: 4 EHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTV-YIEGKAIKLQIWDT 62
Query: 128 AGQ 130
AGQ
Sbjct: 63 AGQ 65
>gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115950|gb|EDO17432.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 208
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+ KVIV+GD VGKTS + RYV + + + YK T+G DF K V D + +Q+WD AG
Sbjct: 8 ILKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDDKAATMQVWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|307777904|dbj|BAJ21348.1| Rab-family small GTPase RabX3B [Tetrahymena thermophila]
Length = 212
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
FK I++GD VGK+ + RY +N F DY T+GV+F KIVK D +KLQ+WD AGQ
Sbjct: 3 FKFIIVGDSGVGKSCMLIRYSKNDFVTDYNATIGVEFQSKIVKIND-ASVKLQIWDTAGQ 61
>gi|145531481|ref|XP_001451507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834559|emb|CAI44582.1| rab_A01 [Paramecium tetraurelia]
gi|124419162|emb|CAK84110.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N + LFK+++IG+ VGK+S + RY +TF ++Y T+GVDF K + D + +KLQ
Sbjct: 3 NREYDYLFKLVIIGNSGVGKSSLLVRYTDDTFSENYISTIGVDFKFKTFRL-DGKGLKLQ 61
Query: 124 LWDIAGQ 130
+WD AGQ
Sbjct: 62 IWDTAGQ 68
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ N F + K T+GV+FA + +K D +KIK Q+WD AG
Sbjct: 14 LFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVED-KKIKAQIWDTAG 72
Query: 130 Q 130
Q
Sbjct: 73 Q 73
>gi|403337670|gb|EJY68057.1| Rab6 [Oxytricha trifallax]
gi|403366411|gb|EJY83007.1| Rab6 [Oxytricha trifallax]
Length = 235
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+K++ +GD +VGKTS + R+ Q+TF +Y+ T+G+DF K + + D + ++LQLWD AGQ
Sbjct: 14 YKIVFLGDQSVGKTSLILRFTQDTFDGNYQATIGIDFLSKTM-YVDDKMVRLQLWDTAGQ 72
>gi|145490393|ref|XP_001431197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833744|emb|CAI39342.1| rab_B24 [Paramecium tetraurelia]
gi|124398300|emb|CAK63799.1| unnamed protein product [Paramecium tetraurelia]
Length = 229
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK IVIGD +VGK+SFV++Y ++ F + +K T+GV+F K+V D++K++LQ+WD AG
Sbjct: 8 MFKFIVIGDQSVGKSSFVKQYSESIFIETHKPTIGVEFVKKMV-VVDKRKVELQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|344278076|ref|XP_003410822.1| PREDICTED: EF-hand calcium-binding domain-containing protein
4B-like [Loxodonta africana]
Length = 728
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 61 KSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
+S + P++LFK++++G+ +VGKTSF++R+ + F TVG+D+ +K V D Q +
Sbjct: 533 ESSPSTPDRLFKIVLVGNSSVGKTSFLRRFCEGRFSPGMAATVGIDYRVKTVNVDDSQ-V 591
Query: 121 KLQLWDIAGQ 130
LQLWD AGQ
Sbjct: 592 ALQLWDTAGQ 601
>gi|89258445|gb|ABD65446.1| Rab41/43 [Suberites domuncula]
Length = 201
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGKT VQR+ + + Y T+GVDF L+ V+ D ++IKLQ+WD AG
Sbjct: 13 LFKLVLIGDAGVGKTCAVQRFKHGVYIERYGNTIGVDFMLRTVEV-DGKRIKLQVWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK+++IGD VGK+ + R+ +T+ DY T+GVDF ++ ++ D + IKL
Sbjct: 1 MNTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTADYISTIGVDFKIRTIEL-DGKTIKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|330799117|ref|XP_003287594.1| Rab GTPase [Dictyostelium purpureum]
gi|325082380|gb|EGC35863.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 50 SLKLVRVPSIRKSFNAPP-EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
S S+ S + P + L K++VIGD VGK+ + R+ N F Y T+GVDF
Sbjct: 12 SFTTTSSASLHGSESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFC 71
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ ++ D +KIKLQ+WD AGQ
Sbjct: 72 IRTIEL-DGKKIKLQIWDTAGQ 92
>gi|326917471|ref|XP_003205022.1| PREDICTED: ras-related protein Rab-12-like [Meleagris gallopavo]
Length = 262
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 56 PSDFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 114
Query: 126 DIAGQ 130
D AGQ
Sbjct: 115 DTAGQ 119
>gi|443723889|gb|ELU12108.1| hypothetical protein CAPTEDRAFT_157234 [Capitella teleta]
Length = 212
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGKT VQR+ TF + T+GVDF +K + D K+KLQ+WD AG
Sbjct: 16 LFKIVLIGDAGVGKTCVVQRFKTGTFLERQGNTIGVDFTMKTINL-DGNKVKLQVWDTAG 74
Query: 130 Q 130
Q
Sbjct: 75 Q 75
>gi|345791687|ref|XP_543866.3| PREDICTED: EF-hand calcium-binding domain-containing protein 4B
[Canis lupus familiaris]
Length = 718
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P++LFK++++G+ VGKTSF++R+ ++ F TVG+D+ +K+V+ D + LQLWD
Sbjct: 529 PDRLFKIVLVGNSAVGKTSFLRRFCEDRFAPGLAATVGIDYQVKMVR-VDDSYVALQLWD 587
Query: 127 IAGQ 130
AGQ
Sbjct: 588 TAGQ 591
>gi|260797685|ref|XP_002593832.1| hypothetical protein BRAFLDRAFT_214835 [Branchiostoma floridae]
gi|229279062|gb|EEN49843.1| hypothetical protein BRAFLDRAFT_214835 [Branchiostoma floridae]
Length = 163
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FKV+ +GD VGK++F+ R + +K + T+GVDF LK V ++ QKI +QLWD AG
Sbjct: 1 MFKVVFVGDSGVGKSTFIYRVCHDDYKATFSSTIGVDFHLKTVVAKN-QKITMQLWDTAG 59
Query: 130 Q 130
Q
Sbjct: 60 Q 60
>gi|348557356|ref|XP_003464485.1| PREDICTED: ras-related protein Rab-12-like [Cavia porcellus]
Length = 248
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 42 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 100
Query: 126 DIAGQ 130
D AGQ
Sbjct: 101 DTAGQ 105
>gi|74834467|emb|CAI44554.1| rab_A58 [Paramecium tetraurelia]
Length = 261
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IGD VGKTS ++++V+ F DY T+GV+F +K ++ D IKLQ+WD +G
Sbjct: 14 LFKFILIGDVAVGKTSLLKQFVEKRFCDDYNMTIGVEFNIKYIQVND-HVIKLQMWDTSG 72
Query: 130 Q 130
Q
Sbjct: 73 Q 73
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF +K V D +++KLQ+WD AG
Sbjct: 13 LFKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLI-DGKRVKLQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|321470661|gb|EFX81636.1| hypothetical protein DAPPUDRAFT_195992 [Daphnia pulex]
Length = 201
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF +Y T+GVDF ++ + + +++KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTI-LLNGERVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|170027760|ref|XP_001841765.1| rab 19 [Culex quinquefasciatus]
gi|167862335|gb|EDS25718.1| rab 19 [Culex quinquefasciatus]
Length = 219
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ F + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 21 LFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTV-DGKKVKLQIWDTAG 79
Query: 130 Q 130
Q
Sbjct: 80 Q 80
>gi|145509224|ref|XP_001440556.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407773|emb|CAK73159.1| unnamed protein product [Paramecium tetraurelia]
Length = 253
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IGD VGKTS ++++V+ F DY T+GV+F +K ++ D IKLQ+WD +G
Sbjct: 14 LFKFILIGDVAVGKTSLLKQFVEKRFCDDYNMTIGVEFNIKYIQVND-HVIKLQMWDTSG 72
Query: 130 Q 130
Q
Sbjct: 73 Q 73
>gi|47197566|emb|CAF89371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 94
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 84 TSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
TS ++RYV + F +Y+ T+GVDFALK++ W DQ+ ++LQLWDIAGQ
Sbjct: 1 TSIIKRYVHHNFSPNYRATIGVDFALKVLNW-DQETVRLQLWDIAGQ 46
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ +++ +FN + +FK+++IGD VGK+ + R+ +N F D K T+GV+F K +
Sbjct: 1 MSNLQANFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVV- 59
Query: 116 DQQKIKLQLWDIAGQ 130
D + +K Q+WD AGQ
Sbjct: 60 DHKTVKAQIWDTAGQ 74
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
+F+ + LFK ++IGD VGK++ + R+ ++ F+ D K T+GV+FA + +K RD+ IK
Sbjct: 5 AFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKL-IK 63
Query: 122 LQLWDIAGQ 130
Q+WD AGQ
Sbjct: 64 AQIWDTAGQ 72
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 51 LKLVRVPSIRKSFNAPPEK--LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFA 108
L + R S +S PE LFK+++IGD VGK+ + R+ +++ + Y T+GVDF
Sbjct: 42 LCIARCSSSHRSKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFK 101
Query: 109 LKIVKWRDQQKIKLQLWDIAGQ 130
++ V+ +D + IKLQ+WD AGQ
Sbjct: 102 IRTVE-QDGKTIKLQIWDTAGQ 122
>gi|71745492|ref|XP_827376.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70831541|gb|EAN77046.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74834804|emb|CAJ30027.1| rab7 homologue [Trypanosoma brucei brucei]
gi|261331581|emb|CBH14575.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 220
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
AP +L K+I++GD VGKT+ V +YV F YK T+G DF + V+ D + + LQ+
Sbjct: 2 APNRQLLKIIILGDSGVGKTALVHQYVNKNFDNRYKATIGADFLTRDVEI-DGKLVTLQI 60
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 61 WDTAGQ 66
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK++++GD VGK++ + R+ +N F D K T+GV+FA K + D + +K Q+WD AG
Sbjct: 12 LFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|89258413|gb|ABD65430.1| Rab3 [Suberites domuncula]
Length = 221
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
++KV+++G+ VGKT+F+ RY +TF + TVG+DF +K + +R ++IKLQ+WD AG
Sbjct: 24 MYKVLIVGNSGVGKTAFLVRYCDDTFSPSFVATVGIDFKVKSL-FRQDKRIKLQIWDTAG 82
Query: 130 Q 130
Q
Sbjct: 83 Q 83
>gi|255730629|ref|XP_002550239.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132196|gb|EER31754.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 228
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVK--WR 115
S R S N+ P FK++V+GD +VGKTS V R+ N F T+G F K+
Sbjct: 9 SRRSSLNSVPVPPFKIVVLGDSSVGKTSLVHRFTTNKFDLHTSNTIGAAFITKVFSPFQN 68
Query: 116 DQQKIKLQLWDIAGQ 130
++ K+KL++WD AGQ
Sbjct: 69 EEHKVKLEIWDTAGQ 83
>gi|301756655|ref|XP_002914177.1| PREDICTED: hypothetical protein LOC100483481, partial [Ailuropoda
melanoleuca]
Length = 503
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S +++ P++LFK++++G+ VGKTSF++R+ ++ F TVG+D+ +K+V D+
Sbjct: 305 SKEEAYPPTPDRLFKIVLVGNSAVGKTSFLRRFCEDRFAPGLAATVGIDYQVKMV-CVDE 363
Query: 118 QKIKLQLWDIAGQ 130
+ LQLWD AGQ
Sbjct: 364 SHVALQLWDTAGQ 376
>gi|395538802|ref|XP_003771363.1| PREDICTED: uncharacterized protein LOC100918303 [Sarcophilus
harrisii]
Length = 922
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
P++LFK+I +G+ +VGK+SF++R+ ++ F TVG+D+ +K VK D+ ++ LQLWD
Sbjct: 731 PDRLFKIIFVGNSSVGKSSFMRRFCEDRFCPSTSATVGLDYQVKTVK-VDKTQVALQLWD 789
Query: 127 IAGQ 130
AGQ
Sbjct: 790 TAGQ 793
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K K++++GD +VGKTS + R++ +TF Y+ T+G+DF K + + D + ++LQLWD A
Sbjct: 18 KRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTL-YLDDRTVRLQLWDTA 76
Query: 129 GQ 130
GQ
Sbjct: 77 GQ 78
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 12/88 (13%)
Query: 54 VRVPSIR--KSFNAPPEK---------LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGT 102
++VPS+ K F AP E LFKV++IGD VGK++ + R+ +N F + K T
Sbjct: 18 IKVPSVNLLKGFIAPDEMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKST 77
Query: 103 VGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
+GV+FA + ++ D + IK Q+WD AGQ
Sbjct: 78 IGVEFATRSIQV-DGKTIKAQIWDTAGQ 104
>gi|194040262|ref|XP_001929671.1| PREDICTED: ras-related protein Rab-23-like [Sus scrofa]
Length = 237
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+ ++L LWD
Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVHDED-VRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
+ ++ FN + +FKV++IGD VGK+ + R+ +N F D K T+GV+F K +
Sbjct: 1 MSNLYGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAI- 59
Query: 116 DQQKIKLQLWDIAGQ 130
DQ+ +K Q+WD AGQ
Sbjct: 60 DQKAVKAQIWDTAGQ 74
>gi|70906330|gb|AAZ14934.1| putative GTPase [Coprinellus disseminatus]
Length = 177
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVI++GD VGKTS + +YV F YK T+G DF K V+ DQQ + +QLWD AG
Sbjct: 7 LLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKSVEVDDQQ-VTIQLWDTAG 65
Query: 130 Q 130
Q
Sbjct: 66 Q 66
>gi|256085306|ref|XP_002578863.1| rab6 [Schistosoma mansoni]
gi|350645823|emb|CCD59585.1| rab6, putative [Schistosoma mansoni]
Length = 203
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
FN P +K FK++ +G+ +VGKTS + R++ TF Y+ T+G+DF K + D + I+L
Sbjct: 4 FNNPLQK-FKLVFLGEQSVGKTSLITRFMYETFDNLYQATIGIDFLSKTMYLED-RTIRL 61
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 62 QLWDTAGQ 69
>gi|226478016|emb|CAX72701.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
FN P K FK++ +G +VGKTS + R++ +TF+ Y+ T+G+DF K + D + I+L
Sbjct: 4 FNNPLRK-FKLVFLGGQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLED-RTIRL 61
Query: 123 QLWDIAGQ 130
QLWD AGQ
Sbjct: 62 QLWDTAGQ 69
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV+++GD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 19 LFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQV-DGKTIKAQIWDTAG 77
Query: 130 Q 130
Q
Sbjct: 78 Q 78
>gi|342186413|emb|CCC95899.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 199
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+KL K+IV+GD GK+S + R+V++TF +D T+GV+F K+V+ +KIKLQ+WD
Sbjct: 6 QKLMKLIVLGDSGSGKSSLLHRFVEDTFVEDRTQTIGVEFGSKVVELSG-RKIKLQIWDT 64
Query: 128 AGQ 130
+GQ
Sbjct: 65 SGQ 67
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+V+ FK D K T+GV+FA K V + + K Q+WD AG
Sbjct: 10 LFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQIWDTAG 69
Query: 130 Q 130
Q
Sbjct: 70 Q 70
>gi|145513861|ref|XP_001442841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834271|emb|CAI44501.1| rab_C34 [Paramecium tetraurelia]
gi|124410202|emb|CAK75444.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVIV+GD VGKT+ + ++ F ++Y T+GVDF +KI+ +D +KIKLQ+WD AG
Sbjct: 9 LVKVIVLGDSGVGKTNILTQFCDQKFSQNYTATIGVDFKIKILNVQD-KKIKLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|119609266|gb|EAW88860.1| hypothetical protein MGC4266, isoform CRA_c [Homo sapiens]
Length = 732
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K ++P P++LFK++ +G+ VG
Sbjct: 501 VSDQGVQGQIPEA--PPLKLTPTSPRGQPVGKEALCKEESSPSAPDRLFKIVFVGNSAVG 558
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 559 KTSFLRRFCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 605
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + RY +N FK + + T+GV+FA + +K D +K Q+WD AG
Sbjct: 15 LFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQIWDTAG 74
Query: 130 Q 130
Q
Sbjct: 75 Q 75
>gi|222418791|ref|NP_001138430.1| EF-hand calcium-binding domain-containing protein 4B isoform a
[Homo sapiens]
gi|194384318|dbj|BAG64932.1| unnamed protein product [Homo sapiens]
Length = 731
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 35 VSEQG-DGEIIEIIDPSLKL---------VRVPSIRKSFNAP--PEKLFKVIVIGDPTVG 82
VS+QG G+I E P LKL V ++ K ++P P++LFK++ +G+ VG
Sbjct: 500 VSDQGVQGQIPEA--PPLKLTPTSPRGQPVGKEALCKEESSPSAPDRLFKIVFVGNSAVG 557
Query: 83 KTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
KTSF++R+ ++ F TVG+D+ +K + D ++ LQLWD AGQ
Sbjct: 558 KTSFLRRFCEDRFSPGMAATVGIDYRVKTLN-VDNSQVALQLWDTAGQ 604
>gi|452820386|gb|EME27429.1| Rab family, other [Galdieria sulphuraria]
Length = 206
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
KL KV+V+GD VGKTS ++R+V F + YK T+G DF K + + D + + LQ+WD A
Sbjct: 10 KLLKVVVLGDSGVGKTSLLERFVNRRFSQQYKATIGADFLTKDM-FVDDRNVNLQIWDTA 68
Query: 129 GQ 130
GQ
Sbjct: 69 GQ 70
>gi|330791055|ref|XP_003283610.1| Rab GTPase [Dictyostelium purpureum]
gi|325086470|gb|EGC39859.1| Rab GTPase [Dictyostelium purpureum]
Length = 208
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K++V+G GKTS +QRY N F+ YK T+GVDF K+++ QK+ LQLWDIAGQ
Sbjct: 14 LKILVVGKLACGKTSIIQRYCHNHFQPKYKPTIGVDFQQKLLEIMG-QKVLLQLWDIAGQ 72
>gi|225709614|gb|ACO10653.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 225
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+I+IGD VGKT R+ FK ++ T+GVDF +K V+ ++IKLQ+WD
Sbjct: 25 DHLFKLIIIGDSGVGKTCITIRFTDEYFKSNFSHTLGVDFKIKTVELH-GKRIKLQIWDT 83
Query: 128 AGQ 130
AGQ
Sbjct: 84 AGQ 86
>gi|449686405|ref|XP_002156581.2| PREDICTED: putative Ras-related protein Rab-33-like [Hydra
magnipapillata]
Length = 238
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K FK+I+IGD VGKT R TF + + T+GVDF KIVK +D+ IKLQ WD A
Sbjct: 15 KTFKIIIIGDANVGKTCLTMRICNGTFPQKTESTIGVDFKEKIVKVQDEL-IKLQFWDSA 73
Query: 129 GQ 130
GQ
Sbjct: 74 GQ 75
>gi|449665586|ref|XP_002167051.2| PREDICTED: ras-related protein Rab-39B-like [Hydra magnipapillata]
Length = 224
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 45/60 (75%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
F+VI+IGD TVGK+S ++++ + + + TVGVDF +++++ D+ ++KLQLWD AGQ
Sbjct: 17 FRVILIGDSTVGKSSLLRQFTEGQYIRTSDPTVGVDFHVRVIQISDKVRVKLQLWDTAGQ 76
>gi|432103185|gb|ELK30426.1| EF-hand calcium-binding domain-containing protein 4B [Myotis
davidii]
Length = 730
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ P++LFK++ +G+ VGKTSF++R+ + F TVG+D+ +K+V D Q + LQL
Sbjct: 539 STPDRLFKIVFVGNSAVGKTSFLRRFCDDRFSPGMTATVGIDYRVKMVHVGDSQ-VALQL 597
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 598 WDTAGQ 603
>gi|328700247|ref|XP_001948288.2| PREDICTED: ras and EF-hand domain-containing protein homolog
[Acyrthosiphon pisum]
Length = 582
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
PE+ +K++ GD VGKT F+ R+ + TF T+GVDF +K ++ D + + LQLWD
Sbjct: 385 PERTYKIVFAGDAAVGKTCFIHRFCKGTFTTKLGSTLGVDFQVKTIR-VDDRNVALQLWD 443
Query: 127 IAGQ 130
AGQ
Sbjct: 444 TAGQ 447
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|391334451|ref|XP_003741617.1| PREDICTED: ras-related protein Rab-23-like [Metaseiulus
occidentalis]
Length = 216
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E FK++V+G+ VGK+S +QR+ + F ++YK T+GVDF ++++ + + ++L +WD
Sbjct: 4 ELAFKLVVVGNGAVGKSSLIQRFCRGVFSQNYKQTIGVDFLERVLEIGNGRCVRLMVWDT 63
Query: 128 AGQ 130
AGQ
Sbjct: 64 AGQ 66
>gi|148682490|gb|EDL14437.1| RAB23, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 264
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 59 IRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQ 118
+ K E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+
Sbjct: 25 VSKMLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED 84
Query: 119 KIKLQLWDIAGQ 130
++L LWD AGQ
Sbjct: 85 -VRLMLWDTAGQ 95
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ TF + + T+GVDF++K V D +KIKLQ+WD AG
Sbjct: 431 LFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTV-LIDDKKIKLQIWDTAG 489
Query: 130 Q 130
Q
Sbjct: 490 Q 490
>gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
Length = 274
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K++++GD +VGKTS + R++ +TF + Y+ T+G+DF K V D + ++L LWD AGQ
Sbjct: 26 KLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRLHLWDTAGQ 84
>gi|126321829|ref|XP_001364776.1| PREDICTED: ras-related protein Rab-12-like [Monodelphis domestica]
Length = 246
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 40 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 98
Query: 126 DIAGQ 130
D AGQ
Sbjct: 99 DTAGQ 103
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ L K++VIGD VGK+ + R+ N F Y T+GVDF ++ ++ D +KIKLQ+WD
Sbjct: 31 DMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIEL-DGKKIKLQIWDT 89
Query: 128 AGQ 130
AGQ
Sbjct: 90 AGQ 92
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|106507168|ref|NP_077768.2| ras-related protein Rab-12 [Mus musculus]
gi|122065941|sp|P35283.3|RAB12_MOUSE RecName: Full=Ras-related protein Rab-12; AltName: Full=Rab-13
gi|112292983|dbj|BAF02869.1| Rab12 [Mus musculus]
gi|157170004|gb|AAI52767.1| RAB12, member RAS oncogene family [synthetic construct]
Length = 243
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 37 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 95
Query: 126 DIAGQ 130
D AGQ
Sbjct: 96 DTAGQ 100
>gi|348588989|ref|XP_003480247.1| PREDICTED: ras-related protein Rab-23-like [Cavia porcellus]
Length = 236
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+ ++L LWD
Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGVFTKDYKKTIGVDFLERQIQINDED-VRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|398009439|ref|XP_003857919.1| small GTP binding protein rab6-like protein [Leishmania donovani]
gi|322496122|emb|CBZ31193.1| small GTP binding protein rab6-like protein [Leishmania donovani]
Length = 274
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 72 KVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
K++++GD +VGKTS + R++ +TF + Y+ T+G+DF K V D + ++L LWD AGQ
Sbjct: 26 KLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRLHLWDTAGQ 84
>gi|1710015|sp|P51152.1|RAB12_CANFA RecName: Full=Ras-related protein Rab-12
gi|437985|emb|CAA80471.1| Rab12 protein [Canis lupus familiaris]
Length = 208
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 2 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 60
Query: 126 DIAGQ 130
D AGQ
Sbjct: 61 DTAGQ 65
>gi|392572292|gb|EIW65444.1| hypothetical protein TREMEDRAFT_70574 [Tremella mesenterica DSM
1558]
Length = 216
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 56 VPSIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWR 115
P+ + ++ P + FK++ +G+ +VGKTS + R++ +TF Y+ T+G+DF K +
Sbjct: 8 TPAAEFTSSSNPLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLE 67
Query: 116 DQQKIKLQLWDIAGQ 130
D+ ++LQLWD AGQ
Sbjct: 68 DRT-VRLQLWDTAGQ 81
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L+KV+VIGD VGK++ + R+ QN F KD K T+GV+F K +++ D IK Q+WD AG
Sbjct: 6 LYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEY-DGVTIKGQIWDTAG 64
Query: 130 Q 130
Q
Sbjct: 65 Q 65
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|126697446|gb|ABO26680.1| RAB protein [Haliotis discus discus]
Length = 200
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFAANTFSGTYITTIGVDFKIRTVDV-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V + +K+KLQ+WD AG
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVVI-NGEKVKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|397494200|ref|XP_003817973.1| PREDICTED: ras-related protein Rab-12 [Pan paniscus]
Length = 258
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 52 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 110
Query: 126 DIAGQ 130
D AGQ
Sbjct: 111 DTAGQ 115
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
+N + +FK+++IGD VGK+ F+ R+ +N F D K T+GV+F K + D + +K
Sbjct: 7 YNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAM-DNKTVKA 65
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 66 QIWDTAGQ 73
>gi|198430272|ref|XP_002128387.1| PREDICTED: similar to Rab35 [Ciona intestinalis]
Length = 203
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ ++ +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTIEI-GGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|443719875|gb|ELU09827.1| hypothetical protein CAPTEDRAFT_21277 [Capitella teleta]
Length = 201
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ V + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFSDNTFSGTYITTIGVDFKIRTVDI-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|56118666|ref|NP_001008109.1| RAB33B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703747|gb|AAH81311.1| RAB33B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269955|emb|CAJ81785.1| RAB33B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 226
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
SF ++FK+IVIGD VGKT R+ F + + T+GVDF + V D ++IK
Sbjct: 24 SFGVSRARIFKIIVIGDSNVGKTCLTYRFCTCCFPERTEATIGVDFRERTVDI-DGERIK 82
Query: 122 LQLWDIAGQ 130
+QLWD AGQ
Sbjct: 83 IQLWDTAGQ 91
>gi|330801036|ref|XP_003288537.1| Rab GTPase [Dictyostelium purpureum]
gi|325081440|gb|EGC34956.1| Rab GTPase [Dictyostelium purpureum]
Length = 197
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ-QKIKLQ 123
A E LFK+I++G+ VGK+S + R+ NTF + T+GVDF +K ++ ++ Q +KLQ
Sbjct: 2 ADEEILFKIILVGESGVGKSSILVRFTDNTFTPHFAPTLGVDFNVKTIRNKETGQTVKLQ 61
Query: 124 LWDIAGQ 130
LWD AGQ
Sbjct: 62 LWDTAGQ 68
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|47223036|emb|CAG07123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + ++I+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 38 PADFKLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 96
Query: 126 DIAGQ 130
D AGQ
Sbjct: 97 DTAGQ 101
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K ++ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|339248033|ref|XP_003375650.1| GTP-binding protein Ryh1 [Trichinella spiralis]
gi|316970962|gb|EFV54813.1| GTP-binding protein Ryh1 [Trichinella spiralis]
Length = 227
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
+A E+ K++V+GD VGKTS R+VQ F Y T+G+DF K + D+ +I LQ
Sbjct: 8 DAVNERRVKIVVVGDCRVGKTSLCFRFVQEQFISAYHQTLGLDFYTKYITLGDRFRITLQ 67
Query: 124 LWDIAGQN 131
+WD++GQ
Sbjct: 68 IWDVSGQQ 75
>gi|428180040|gb|EKX48909.1| hypothetical protein GUITHDRAFT_151724 [Guillardia theta CCMP2712]
Length = 207
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
APP +K++ +GD +VGKTS + R++ + F Y+ T+G+DF K + + D + ++LQL
Sbjct: 7 APPLAKYKLVFLGDQSVGKTSIITRFMYDKFDSTYQATIGIDFLSKTM-YLDDRVVRLQL 65
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 66 WDTAGQ 71
>gi|225453364|ref|XP_002272294.1| PREDICTED: GTP-binding protein YPTM2-like [Vitis vinifera]
Length = 203
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N + LFK++++GD VGK+ + RY +T+ + Y T+GVDF + ++ RD + +KL
Sbjct: 1 MNYEYDHLFKILLVGDSGVGKSCLLLRYADDTYSEAYISTIGVDFKICSME-RDGRNLKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|326512418|dbj|BAJ99564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVIV+GD VGKTS + +YV N F + YK T+G DF K V D+ + LQ+WD AG
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRL-VTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGKT + R+ ++ F Y T+G+DF ++ V D +KIKLQ+WD
Sbjct: 31 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI-DGKKIKLQVWDT 89
Query: 128 AGQ 130
AGQ
Sbjct: 90 AGQ 92
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|312380644|gb|EFR26581.1| hypothetical protein AND_07236 [Anopheles darlingi]
Length = 199
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD GKT VQR+ F + + T+GVDF++K V D +K+KLQ+WD AG
Sbjct: 23 LFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTV-DDKKVKLQIWDTAG 81
Query: 130 Q 130
Q
Sbjct: 82 Q 82
>gi|158186685|ref|NP_037149.1| ras-related protein Rab-12 [Rattus norvegicus]
gi|449081279|sp|P35284.2|RAB12_RAT RecName: Full=Ras-related protein Rab-12
Length = 243
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 37 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 95
Query: 126 DIAGQ 130
D AGQ
Sbjct: 96 DTAGQ 100
>gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 213
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
+ P K FK++ +G+ +VGKTS + R++ +TF Y+ T+G+DF K + D + ++LQL
Sbjct: 16 STPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED-RTVRLQL 74
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 75 WDTAGQ 80
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|297734623|emb|CBI16674.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
F + LFK++++GD VGK+ + RY +T+ + Y T+GVDF + ++ RD + +KL
Sbjct: 3 FKTLRDHLFKILLVGDSGVGKSCLLLRYADDTYSEAYISTIGVDFKICSME-RDGRNLKL 61
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 62 QIWDTAGQ 69
>gi|189069283|dbj|BAG36315.1| unnamed protein product [Homo sapiens]
Length = 219
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK+++IG+ + GKTSF+ RY ++F + TVG+DF +K V +R ++IKLQ+WD AG
Sbjct: 22 MFKLLLIGNSSEGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDTAG 80
Query: 130 Q 130
Q
Sbjct: 81 Q 81
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E LFK+++IGD VGK++ + RY +N F K T+GV+F + ++ D +++K Q+WD
Sbjct: 10 EEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEI-DSKEVKAQIWD 68
Query: 127 IAGQ 130
AGQ
Sbjct: 69 TAGQ 72
>gi|395511720|ref|XP_003760101.1| PREDICTED: ras-related protein Rab-12 [Sarcophilus harrisii]
Length = 246
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 40 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 98
Query: 126 DIAGQ 130
D AGQ
Sbjct: 99 DTAGQ 103
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
Length = 207
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|291230396|ref|XP_002735152.1| PREDICTED: RAB35, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 203
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
+ LFK+++IGD VGK+S + R+ NTF Y T+GVDF ++ + + +K+KLQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFAGTYITTIGVDFKIRTIDV-NGEKVKLQIWDT 64
Query: 128 AGQ 130
AGQ
Sbjct: 65 AGQ 67
>gi|156121229|ref|NP_001095762.1| ras-related protein Rab-12 [Bos taurus]
gi|151554332|gb|AAI49543.1| RAB12 protein [Bos taurus]
Length = 244
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 38 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 96
Query: 126 DIAGQ 130
D AGQ
Sbjct: 97 DTAGQ 101
>gi|357136165|ref|XP_003569676.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 206
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVIV+GD VGKTS + +YV N F + YK T+G DF K V D+ + LQ+WD AG
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRL-VTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|440895937|gb|ELR47996.1| EF-hand calcium-binding domain-containing protein 4B [Bos grunniens
mutus]
Length = 720
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S + F + P++LFK++ +G+ +VGKTSF+ R+ F TVG+D+ +K V+ D
Sbjct: 522 SEEEGFPSTPDRLFKIVFVGNSSVGKTSFLGRFCDGRFSPGSAATVGIDYRVKTVR-VDD 580
Query: 118 QKIKLQLWDIAGQ 130
++ +QLWD AGQ
Sbjct: 581 SRVAVQLWDTAGQ 593
>gi|145545722|ref|XP_001458545.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833816|emb|CAI39367.1| rab_A24 [Paramecium tetraurelia]
gi|124426365|emb|CAK91148.1| unnamed protein product [Paramecium tetraurelia]
Length = 229
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
+FK IV+GD +VGK+SFV++Y ++ F + +K T+GV+F KIV D+++++LQ+WD AG
Sbjct: 8 MFKFIVVGDQSVGKSSFVKQYSESIFIETHKPTIGVEFVKKIV-VVDKRRVELQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|363730689|ref|XP_003640848.1| PREDICTED: ras-related protein Rab-12 [Gallus gallus]
Length = 250
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 44 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 102
Query: 126 DIAGQ 130
D AGQ
Sbjct: 103 DTAGQ 107
>gi|354545927|emb|CCE42656.1| hypothetical protein CPAR2_202990 [Candida parapsilosis]
Length = 215
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + ++LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEEGKTVRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|326668725|ref|XP_689291.4| PREDICTED: ras-related protein Rab-44 [Danio rerio]
Length = 363
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 71 FKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAGQ 130
F V+++G+ VGKTSF++R+ + F +DY+ T+GVD ++ V+ D + +KLQ+WD AGQ
Sbjct: 179 FNVVMVGNSCVGKTSFIRRFHEGQFTEDYRSTIGVDTFVQTVELPD-RTVKLQIWDTAGQ 237
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S N + LFK+++IGD VGK+ + R+ +T+ + Y T+GVDF ++ ++ D + IK
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIK 61
Query: 122 LQLWDIAGQ 130
LQ+WD AGQ
Sbjct: 62 LQIWDTAGQ 70
>gi|71026455|ref|XP_762899.1| small GTP-binding protein Rab1 [Theileria parva strain Muguga]
gi|68349851|gb|EAN30616.1| small GTP-binding protein rab1 [Theileria parva]
Length = 227
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 70 LFKVIVIGDPTVGKTSFVQRY-------VQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
LFK+IVIGD GK+S + R+ + NT+ + Y T+GVDF +K VK D IKL
Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFAVFLFIFIDNTYSESYMSTIGVDFKIKTVKI-DNTTIKL 65
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 66 QIWDTAGQ 73
>gi|332634768|ref|NP_001193835.1| ras-related protein Rab-23 [Bos taurus]
gi|426250098|ref|XP_004018775.1| PREDICTED: ras-related protein Rab-23 [Ovis aries]
gi|296474595|tpg|DAA16710.1| TPA: Rab23-like [Bos taurus]
gi|440902781|gb|ELR53528.1| Ras-related protein Rab-23 [Bos grunniens mutus]
Length = 237
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+ ++L LWD
Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED-VRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|145535872|ref|XP_001453669.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834337|emb|CAI44520.1| rab_B58 [Paramecium tetraurelia]
gi|124421391|emb|CAK86272.1| unnamed protein product [Paramecium tetraurelia]
Length = 262
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK I+IGD VGKTS ++++V+ F DY T+GV+F +K ++ D IKLQ+WD +G
Sbjct: 14 LFKFILIGDIAVGKTSLLKQFVEKRFCDDYNLTIGVEFNIKYIQVND-HVIKLQMWDTSG 72
Query: 130 Q 130
Q
Sbjct: 73 Q 73
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 61 KSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
KS N P + L K+++IGD VGK+ + RY + F + T+G+DF +K + DQ+K+
Sbjct: 5 KSSNKPFDVLVKLLLIGDSGVGKSCLLLRYSDDKFTTSFITTIGIDFKIKTIDL-DQKKV 63
Query: 121 KLQLWDIAGQ 130
K+Q+WD AGQ
Sbjct: 64 KMQIWDTAGQ 73
>gi|390342453|ref|XP_796218.3| PREDICTED: ras-related protein Rab-8A-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L+K++VIGDP VGKT + R+ ++ F + +G+DF +K+++ D +KIKLQ+WD AG
Sbjct: 8 LYKIVVIGDPGVGKTCVIFRFSEDVFHTTFLSVIGIDFKIKMIEL-DGKKIKLQIWDTAG 66
Query: 130 Q 130
Q
Sbjct: 67 Q 67
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S N + LFK+++IGD VGK+ + R+ +T+ + Y T+GVDF ++ ++ D + IK
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIK 61
Query: 122 LQLWDIAGQ 130
LQ+WD AGQ
Sbjct: 62 LQIWDTAGQ 70
>gi|395857340|ref|XP_003801056.1| PREDICTED: ras-related protein Rab-12 [Otolemur garnettii]
Length = 234
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 28 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 86
Query: 126 DIAGQ 130
D AGQ
Sbjct: 87 DTAGQ 91
>gi|448526176|ref|XP_003869288.1| Ypt6 protein [Candida orthopsilosis Co 90-125]
gi|380353641|emb|CCG23152.1| Ypt6 protein [Candida orthopsilosis]
Length = 215
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 69 KLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIA 128
K +K++ +GD +VGKTS + R++ +TF + Y T+G+DF K + + + ++LQLWD A
Sbjct: 10 KKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEEGKTVRLQLWDTA 69
Query: 129 GQ 130
GQ
Sbjct: 70 GQ 71
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 67 PEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWD 126
E LFK+++IGD VGK++ + RY +N F K T+GV+F + ++ D +++K Q+WD
Sbjct: 10 EEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEI-DSKEVKAQIWD 68
Query: 127 IAGQ 130
AGQ
Sbjct: 69 TAGQ 72
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 63 FNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKL 122
N+ + LFK+++IG+ VGK+ + R+ +T+ DY T+GVDF +K V+ D + +KL
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVEL-DGKTVKL 59
Query: 123 QLWDIAGQ 130
Q+WD AGQ
Sbjct: 60 QIWDTAGQ 67
>gi|340501803|gb|EGR28543.1| rab gtpase, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 64 NAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQ 123
N ++LFK+I++GD VGKTS + +YV F + Y+ TVG DF K V D + + LQ
Sbjct: 3 NTKRKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-DDRMVTLQ 61
Query: 124 LWDIAGQ 130
+WD AGQ
Sbjct: 62 IWDTAGQ 68
>gi|224046089|ref|XP_002191205.1| PREDICTED: ras-related protein Rab-12 [Taeniopygia guttata]
Length = 250
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 44 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 102
Query: 126 DIAGQ 130
D AGQ
Sbjct: 103 DTAGQ 107
>gi|379134821|gb|AFC93432.1| Ras-like protein [Triticum aestivum]
Length = 206
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
L KVIV+GD VGKTS + +YV N F + YK T+G DF K V D+ + LQ+WD AG
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVAKEVLIEDRL-VTLQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|355561818|gb|EHH18450.1| hypothetical protein EGK_15045 [Macaca mulatta]
Length = 237
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+ ++L LWD
Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED-VRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQI-DNKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 61 KSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKI 120
+S++ + LFK ++IGD VGK++ + R+ ++ F+ D K T+GVDFA + V+ D + I
Sbjct: 4 ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD-KTI 62
Query: 121 KLQLWDIAGQ 130
K Q+WD AGQ
Sbjct: 63 KAQIWDTAGQ 72
>gi|355714875|gb|AES05146.1| RAB23, member RAS oncoprotein family [Mustela putorius furo]
Length = 103
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S K E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+
Sbjct: 8 STAKMLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDE 67
Query: 118 QKIKLQLWDIAGQ 130
++L LWD AGQ
Sbjct: 68 D-VRLMLWDTAGQ 79
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFK+++IGD VGK++ + R+ N F D K T+GV+FA + + D +KIK Q+WD AG
Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDV-DGKKIKAQIWDTAG 71
Query: 130 Q 130
Q
Sbjct: 72 Q 72
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|332225892|ref|XP_003262119.1| PREDICTED: ras-related protein Rab-12 [Nomascus leucogenys]
Length = 244
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 38 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 96
Query: 126 DIAGQ 130
D AGQ
Sbjct: 97 DTAGQ 101
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 62 SFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIK 121
S N + LFK+++IGD VGK+ + R+ +T+ + Y T+GVDF ++ ++ D + IK
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIK 61
Query: 122 LQLWDIAGQ 130
LQ+WD AGQ
Sbjct: 62 LQIWDTAGQ 70
>gi|297466459|ref|XP_002704510.1| PREDICTED: LOW QUALITY PROTEIN: EF-hand calcium-binding
domain-containing protein 4B [Bos taurus]
Length = 723
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S + F + P++LFK++ +G+ +VGKTSF+ R+ F TVG+D+ +K V+ D
Sbjct: 525 SEEEGFPSTPDRLFKIVFVGNSSVGKTSFLGRFCDGRFSPGSAATVGIDYRVKTVR-VDD 583
Query: 118 QKIKLQLWDIAGQ 130
++ +QLWD AGQ
Sbjct: 584 SRVAVQLWDTAGQ 596
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E LFK++VIGD VGK++ + RY +N F + K T+GV+F ++++ D +++K Q+WD
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEI-DGKEVKAQIWDT 66
Query: 128 AGQ 130
AGQ
Sbjct: 67 AGQ 69
>gi|417408868|gb|JAA50968.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 232
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 26 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 84
Query: 126 DIAGQ 130
D AGQ
Sbjct: 85 DTAGQ 89
>gi|380799405|gb|AFE71578.1| ras-related protein Rab-12, partial [Macaca mulatta]
Length = 222
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 16 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 74
Query: 126 DIAGQ 130
D AGQ
Sbjct: 75 DTAGQ 79
>gi|402902666|ref|XP_003914219.1| PREDICTED: ras-related protein Rab-12 [Papio anubis]
Length = 247
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 41 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 99
Query: 126 DIAGQ 130
D AGQ
Sbjct: 100 DTAGQ 104
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 65 APPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQL 124
E LFK+++IGD VGK++ + R+ +N F + K T+GV+F ++V+ D ++IK Q+
Sbjct: 7 GGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEI-DGKEIKAQI 65
Query: 125 WDIAGQ 130
WD AGQ
Sbjct: 66 WDTAGQ 71
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 70 LFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDIAG 129
LFKV++IGD VGK++ + R+ +N F D K T+GV+FA + ++ D + IK Q+WD AG
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQV-DSKTIKAQIWDTAG 67
Query: 130 Q 130
Q
Sbjct: 68 Q 68
>gi|297475334|ref|XP_002687937.1| PREDICTED: EF-hand calcium-binding domain-containing protein 4B
[Bos taurus]
gi|296487099|tpg|DAA29212.1| TPA: EF-hand calcium binding domain 4B [Bos taurus]
Length = 723
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 58 SIRKSFNAPPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQ 117
S + F + P++LFK++ +G+ +VGKTSF+ R+ F TVG+D+ +K V+ D
Sbjct: 525 SEEEGFPSTPDRLFKIVFVGNSSVGKTSFLGRFCDGRFSPGSAATVGIDYRVKTVR-VDD 583
Query: 118 QKIKLQLWDIAGQ 130
++ +QLWD AGQ
Sbjct: 584 SRVAVQLWDTAGQ 596
>gi|106507164|ref|NP_001020471.2| ras-related protein Rab-12 [Homo sapiens]
gi|114672319|ref|XP_001140752.1| PREDICTED: ras-related protein Rab-12 [Pan troglodytes]
gi|122064944|sp|Q6IQ22.3|RAB12_HUMAN RecName: Full=Ras-related protein Rab-12
gi|119622021|gb|EAX01616.1| hCG37212 [Homo sapiens]
gi|307684354|dbj|BAJ20217.1| RAB12, member RAS oncogene family [synthetic construct]
gi|410212514|gb|JAA03476.1| RAB12, member RAS oncogene family [Pan troglodytes]
gi|410255034|gb|JAA15484.1| RAB12, member RAS oncogene family [Pan troglodytes]
Length = 244
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 66 PPEKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLW 125
P + +VI+IG VGKTS ++R+ +TF + K TVGVDF +K V+ R +KI+LQ+W
Sbjct: 38 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIW 96
Query: 126 DIAGQ 130
D AGQ
Sbjct: 97 DTAGQ 101
>gi|31543565|ref|NP_033025.2| ras-related protein Rab-23 [Mus musculus]
gi|228480287|ref|NP_001153201.1| ras-related protein Rab-23 [Mus musculus]
gi|12855257|dbj|BAB30270.1| unnamed protein product [Mus musculus]
gi|26338556|dbj|BAC32949.1| unnamed protein product [Mus musculus]
gi|148682489|gb|EDL14436.1| RAB23, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 237
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 EKLFKVIVIGDPTVGKTSFVQRYVQNTFKKDYKGTVGVDFALKIVKWRDQQKIKLQLWDI 127
E K++V+G+ VGK+S +QRY + F KDYK T+GVDF + ++ D+ ++L LWD
Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED-VRLMLWDT 65
Query: 128 AGQ 130
AGQ
Sbjct: 66 AGQ 68
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,232,000,836
Number of Sequences: 23463169
Number of extensions: 89813770
Number of successful extensions: 287970
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10065
Number of HSP's successfully gapped in prelim test: 4905
Number of HSP's that attempted gapping in prelim test: 267658
Number of HSP's gapped (non-prelim): 15137
length of query: 131
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 34
effective length of database: 10,083,267,974
effective search space: 342831111116
effective search space used: 342831111116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)