Query psy10879
Match_columns 245
No_of_seqs 119 out of 1188
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 20:45:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 2.1E-29 7.1E-34 216.1 15.5 205 19-238 12-236 (280)
2 1xhb_A Polypeptide N-acetylgal 96.5 0.11 3.8E-06 46.5 15.9 192 19-216 28-248 (472)
3 1qg8_A Protein (spore coat pol 96.1 0.25 8.4E-06 39.8 14.8 155 51-212 30-201 (255)
4 2d7i_A Polypeptide N-acetylgal 95.8 0.18 6E-06 46.6 14.0 191 20-217 112-329 (570)
5 4fix_A UDP-galactofuranosyl tr 95.7 0.2 6.9E-06 47.2 13.9 194 17-216 177-407 (657)
6 2ffu_A Ppgalnact-2, polypeptid 95.5 0.28 9.6E-06 44.3 14.0 189 19-217 65-281 (501)
7 3bcv_A Putative glycosyltransf 95.0 0.31 1.1E-05 38.8 11.3 189 21-218 6-217 (240)
8 2z86_A Chondroitin synthase; G 94.5 0.56 1.9E-05 43.4 13.3 193 20-219 93-323 (625)
9 4hg6_A Cellulose synthase subu 94.2 2.3 7.8E-05 40.9 17.1 191 18-218 138-360 (802)
10 2z86_A Chondroitin synthase; G 92.6 1.1 3.9E-05 41.3 11.8 184 20-218 375-564 (625)
11 2c0n_A A197; thermophil protei 88.3 3.7 0.00013 32.5 9.3 105 105-215 50-165 (203)
12 2fy7_A Beta-1,4-galactosyltran 79.2 9.2 0.00032 31.8 8.6 93 105-216 126-218 (287)
13 3ckj_A Putative uncharacterize 51.6 46 0.0016 27.6 7.5 108 100-213 123-250 (329)
14 3f1y_A Mannosyl-3-phosphoglyce 44.7 24 0.0008 30.7 4.6 112 98-214 169-296 (387)
15 2bo4_A Mannosylglycerate synth 38.2 2E+02 0.0067 24.9 13.6 126 90-217 74-208 (397)
16 2l82_A Designed protein OR32; 35.3 61 0.0021 22.9 4.6 52 26-80 55-106 (162)
17 2d0j_A Galactosylgalactosylxyl 31.0 1.3E+02 0.0045 24.3 6.6 84 96-184 83-177 (246)
18 3l7i_A Teichoic acid biosynthe 21.7 19 0.00066 33.8 0.0 111 98-212 73-191 (729)
19 1omz_A Alpha-1,4-N-acetylhexos 20.5 1.1E+02 0.0038 25.5 4.4 38 108-146 106-143 (293)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.96 E-value=2.1e-29 Score=216.06 Aligned_cols=205 Identities=16% Similarity=0.174 Sum_probs=137.2
Q ss_pred CeeEEEEEeCCCCCHH-HHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCcc--ccCCchhHH
Q psy10879 19 SYFIVILILTSSKNYI-RRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVP--DEYSSLSQK 95 (245)
Q Consensus 19 ~~~lli~V~S~~~~~~-~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~--d~y~~l~~K 95 (245)
.-+|+|+|+|+++++. |+.+||+||++.++. ..+|+++...+... .. ..++++ ..++. .++.+++.|
T Consensus 12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~---~~fifsd~~d~~l~----~~--~~~~~~-~~~~~~~~~~~~l~~K 81 (280)
T 2j0a_A 12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ---QTFIFTDSPDERLQ----ER--LGPHLV-VTQCSAEHSHPALSCK 81 (280)
T ss_dssp GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG---GEEEEESSCCHHHH----HH--HGGGEE-ECCC-------CCCHH
T ss_pred cccEEEEEECcHHHHHHHHHHHHHHHhccCCC---ceEEEcCCCccccc----cc--ccccce-eccccccccccchHHH
Confidence 4689999999998665 556999999998731 22334433322222 11 245676 34443 467888999
Q ss_pred HHHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccC-cccCCCCCCccC
Q psy10879 96 VLHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKN-WFLCDRYLPYAL 173 (245)
Q Consensus 96 ~~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~-~~~~~~yp~y~~ 173 (245)
+...+.+.. . +++||+|+||||||++++|.++|...+++ +++|+|++... .|.|. +++.+. .+....|+.++|
T Consensus 82 ~~~~~~~~l--~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~-~~~YiG~~~~~-~~~~~-~~~~~~~~~~~~~~~y~~G 156 (280)
T 2j0a_A 82 MAAEFDAFL--VSGLRWFCHVDDDNYVNPKALLQLLKTFPQD-RDVYVGKPSLN-RPIHA-SELQSKQRTKLVRFWFATG 156 (280)
T ss_dssp HHHHHHHHH--HHTCSEEEEEETTEEECHHHHHHHHTTSCTT-SCCEEECEEC---------------------CCEECG
T ss_pred HHHHHHHHh--CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCC-CCEEEEEeccC-ccccc-cccCccccccccccCcccC
Confidence 998887542 3 89999999999999999999999999998 99999998744 34332 122221 111223433347
Q ss_pred CCeeeecHHHHHHHHHhcccCC-------CCCCChhHHHHHHH-hCCCeEeecCCcccccCC----CCcc---CCeEEEe
Q psy10879 174 GGGYVLSHLLVKFISENSHMLS-------SYISEDVSVGVWLS-ALDITRYHDVRFDTEFQS----RGCN---NSYLIVH 238 (245)
Q Consensus 174 G~gyvlS~~~~~~l~~~~~~~~-------~~~~eDv~iG~~l~-~~~v~~~~~~~f~~~~~~----~~c~---~~~~~~h 238 (245)
|+||+||++++++|+.....++ ....||+++|+|+. ++||.+++.++||.+.+. .++. .-.+.+|
T Consensus 157 GaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~~~~~s~~ 236 (280)
T 2j0a_A 157 GAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSYG 236 (280)
T ss_dssp GGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGGCSEEECE
T ss_pred CCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhccCcceecc
Confidence 8999999999999998765442 23468999999999 999999999999976652 3444 3456666
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=96.47 E-value=0.11 Score=46.45 Aligned_cols=192 Identities=9% Similarity=0.068 Sum_probs=102.9
Q ss_pred CeeEEEEEeCCCCC-HHHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCC-CEEEcCCccccCCchhHH
Q psy10879 19 SYFIVILILTSSKN-YIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYD-DILLLNQVPDEYSSLSQK 95 (245)
Q Consensus 19 ~~~lli~V~S~~~~-~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~-Dii~~~d~~d~y~~l~~K 95 (245)
.+.+-|+|++--+. ...+..|+.--.+.......+++.|-..+. +...+.+++-++.+. .+.++. ..+. .+
T Consensus 28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~-~~~n-~G---- 101 (472)
T 1xhb_A 28 LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR-MEQR-SG---- 101 (472)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE-CSSC-CC----
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE-CCCC-CC----
Confidence 35677777776554 333344433333222111235555544443 334555555556666 454432 1211 12
Q ss_pred HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCCe-------eecC-CCCccc-Ccc
Q psy10879 96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRAR-------VRRA-GKWKEK-NWF 163 (245)
Q Consensus 96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~~-------~~r~-~k~~~~-~~~ 163 (245)
.-.+.....+....+|+++.|+|+.+..+-|..++.........+..|.+. .... ..+. -.|... .+.
T Consensus 102 ~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (472)
T 1xhb_A 102 LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWY 181 (472)
T ss_dssp HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEE
T ss_pred hHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecc
Confidence 233444455566789999999999999988888887654331334444431 1100 0000 011100 000
Q ss_pred c--------------CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879 164 L--------------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY 216 (245)
Q Consensus 164 ~--------------~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~ 216 (245)
. ....-+++.|+++++++++++.+-........+..||+-++.-+...|.+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~ 248 (472)
T 1xhb_A 182 PVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLE 248 (472)
T ss_dssp ECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEE
T ss_pred cCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEE
Confidence 0 0112246789999999999998754333344445899999887887776544
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=96.11 E-value=0.25 Score=39.82 Aligned_cols=155 Identities=5% Similarity=-0.075 Sum_probs=83.9
Q ss_pred cEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccC-----CchhHHHHHHHHHHHhccceeEEEEecCceeeehHH
Q psy10879 51 QVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEY-----SSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPN 125 (245)
Q Consensus 51 ~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y-----~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~ 125 (245)
.++++.+-..+.+... .+.++......|..+.. ...- .|. -.-.++....+.++.+|++..|+|.++..+.
T Consensus 30 ~~eiivvDd~S~d~t~-~~~~~~~~~~~i~~i~~-~~~~~~~~~~n~--G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~ 105 (255)
T 1qg8_A 30 DFELFIMDDNSNEETL-NVIRPFLNDNRVRFYQS-DISGVKERTEKT--RYAALINQAIEMAEGEYITYATDDNIYMPDR 105 (255)
T ss_dssp CEEEEEEECSCCHHHH-HHHGGGGGSTTEEEEEC-CCCSHHHHHSSC--HHHHHHHHHHHHCCCSEEEEEETTEEECTTH
T ss_pred ceEEEEEECCCCchHH-HHHHHHhhcCCEEEEec-cccccccccccc--CHHHHHHHHHHHcCCCEEEEeCCCCccChHH
Confidence 4566666555443333 33344433556654321 1000 121 2345566666777899999999999999888
Q ss_pred HHHHHhhcC--cCCcccEEEEecC-----CCeeecCCCCcccCcccCCCCCCccCCCeeeecHHHHHHHH-Hhcc----c
Q psy10879 126 IIHELENKF--HYEKKLYWGFFDG-----RARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFIS-ENSH----M 193 (245)
Q Consensus 126 L~~~L~~~~--~~~~~~y~G~~~~-----~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyvlS~~~~~~l~-~~~~----~ 193 (245)
|..++.... +. -.+..|.... ...+.. .+..+..........+..|++.++.+++++++- .... .
T Consensus 106 l~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~ 182 (255)
T 1qg8_A 106 LLKMVRELDTHPE-KAVIYSASKTYHLNENRDIVK--ETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDES 182 (255)
T ss_dssp HHHHHHHHHHCTT-CCEEEEEEEEEEEC---CEEE--EEEECCCSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCC
T ss_pred HHHHHHHHHhCCC-ceEEEeceEEEEeCCCCcchh--hccCchHHHHHhhcCCCccceEEEEHHHHHhhcccccccccCC
Confidence 888776653 22 4455555421 111110 000110000112233567899999999999876 3311 1
Q ss_pred CCCCCCChhHHHHHHHhCC
Q psy10879 194 LSSYISEDVSVGVWLSALD 212 (245)
Q Consensus 194 ~~~~~~eDv~iG~~l~~~~ 212 (245)
......||..+..-+...|
T Consensus 183 ~~~~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 183 PAFYRIGDARFFWRVNHFY 201 (255)
T ss_dssp GGGSTTHHHHHHHHHTTTC
T ss_pred cccchHHHHHHHHHHHHhC
Confidence 1234679998876665554
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=95.81 E-value=0.18 Score=46.60 Aligned_cols=191 Identities=9% Similarity=-0.005 Sum_probs=100.1
Q ss_pred eeEEEEEeCCCCC-HHHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHH
Q psy10879 20 YFIVILILTSSKN-YIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL 97 (245)
Q Consensus 20 ~~lli~V~S~~~~-~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~ 97 (245)
+.+-|+|++--.. ...+..|..--.+.......+++.|-..+. +++.+.+++.++.+..|.++.. ... .++ -
T Consensus 112 P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~-~~n-~G~----~ 185 (570)
T 2d7i_A 112 PNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRT-KKR-EGL----I 185 (570)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEEC-SSC-CCH----H
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEEC-CCC-CCH----H
Confidence 5677777776554 222333322221111111235555544444 3335556665666766654421 111 222 3
Q ss_pred HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEE-Eec---CCCe---e-----ecC-CCCccc-C--
Q psy10879 98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWG-FFD---GRAR---V-----RRA-GKWKEK-N-- 161 (245)
Q Consensus 98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G-~~~---~~~~---~-----~r~-~k~~~~-~-- 161 (245)
.+.....+..+.+|+++.|+|+.+..+-|..++...... ....+| .+. .... . .+. -.|... .
T Consensus 186 ~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~-~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (570)
T 2d7i_A 186 RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARN-RKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRI 264 (570)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHC-TTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhC-CCEEEeeeeeccCCCchhhccccCCccccccccccccccc
Confidence 334444455678999999999999888777777665443 333333 221 1100 0 000 011100 0
Q ss_pred ------ccc--C-CCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879 162 ------WFL--C-DRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH 217 (245)
Q Consensus 162 ------~~~--~-~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~ 217 (245)
... . ..--+++.|+++++++++++.+-...........||+-++.-+...|.+...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 329 (570)
T 2d7i_A 265 PIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMED 329 (570)
T ss_dssp CCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred ccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEE
Confidence 000 0 0112457799999999999988544333444447999998888888866543
No 5
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=95.65 E-value=0.2 Score=47.20 Aligned_cols=194 Identities=10% Similarity=-0.011 Sum_probs=99.1
Q ss_pred CCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcC-CCcEEEEEEeecCc--hHHHHHHHHHhh-hCCCEEEcCCccccCCch
Q psy10879 17 KHSYFIVILILTSSKNYIRRKNIRDTWIKNIE-KYQVKYLFSIGNKE--NVVDVKLKEEIR-RYDDILLLNQVPDEYSSL 92 (245)
Q Consensus 17 ~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~-~~~~~~~Fv~g~~~--~~~~~~l~~E~~-~~~Dii~~~d~~d~y~~l 92 (245)
+.++.|-|+|+|--....-++.|.. -.++.. .....-++|+...+ ++....+.+..+ ....|..+. .++ ...
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~S-L~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~--~~N-~G~ 252 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRE-LTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHD--QPN-LGG 252 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHH-HTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEE--CCC-CHH
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHH-HHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEE--CCC-CCH
Confidence 3456777777776433333444433 222210 01233466666554 222222222222 223454432 111 222
Q ss_pred hHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEE-EecCCCee----------ecCCC-Cc-c
Q psy10879 93 SQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWG-FFDGRARV----------RRAGK-WK-E 159 (245)
Q Consensus 93 ~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G-~~~~~~~~----------~r~~k-~~-~ 159 (245)
+.-.=.+++.+....+++|++++|||+.+..+.|..++...........+| .+.....+ ...+. |. .
T Consensus 253 a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (657)
T 4fix_A 253 SGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAA 332 (657)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccc
Confidence 222234555554444689999999999999988888876653321334444 44311110 00000 00 0
Q ss_pred c--------------------CcccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879 160 K--------------------NWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY 216 (245)
Q Consensus 160 ~--------------------~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~ 216 (245)
+ ..+.......|++|++.++.+++++.+---. --....||+-++.=+...|.+.+
T Consensus 333 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd--~~F~~~ED~Dl~lR~~~~G~ki~ 407 (657)
T 4fix_A 333 PHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL--PLFIKWDDADYGLRAAEHGYPTV 407 (657)
T ss_dssp TTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC--SCSSSSHHHHHHHHHHHTTCCEE
T ss_pred ccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCCh--hHhccCcHHHHHHHHHHcCCeEE
Confidence 0 0011112234788999999999999863222 12345799999988888886543
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=95.52 E-value=0.28 Score=44.27 Aligned_cols=189 Identities=10% Similarity=0.043 Sum_probs=98.2
Q ss_pred CeeEEEEEeCCCCCH-HHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchhHHH
Q psy10879 19 SYFIVILILTSSKNY-IRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKV 96 (245)
Q Consensus 19 ~~~lli~V~S~~~~~-~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~ 96 (245)
.+.+-|+|++--... ..+..|..--.+.......++++|-..+. ++.. ...+.+..+.++. .. .|. -.
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~----~~~~~~~~v~vi~-~~---~n~--G~ 134 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG----ALLGKIEKVRVLR-ND---RRE--GL 134 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH----HGGGGBTTEEEEE-CS---SCC--HH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH----HHHhcCCCEEEEE-CC---CCc--CH
Confidence 346666677655443 23333322221111111245565554444 3322 2234455665432 11 221 12
Q ss_pred HHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCCee-------ecCC-CCccc-Cc--
Q psy10879 97 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRARV-------RRAG-KWKEK-NW-- 162 (245)
Q Consensus 97 ~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~~~-------~r~~-k~~~~-~~-- 162 (245)
-.+.....+..+.+|++++|+|..+.++-|..++.........+..+.+. ..... .+.+ .|... .+
T Consensus 135 ~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (501)
T 2ffu_A 135 MRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDY 214 (501)
T ss_dssp HHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCcccc
Confidence 44555555666899999999999999988888887654431234433321 00000 0000 01100 00
Q ss_pred -----------cc-CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879 163 -----------FL-CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH 217 (245)
Q Consensus 163 -----------~~-~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~ 217 (245)
.+ ....-+++.|+++++++++++.+-...........||+-+..-+...|.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 281 (501)
T 2ffu_A 215 MTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI 281 (501)
T ss_dssp CCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence 00 01112467899999999999988644333444458999998777777765443
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=94.98 E-value=0.31 Score=38.75 Aligned_cols=189 Identities=8% Similarity=0.002 Sum_probs=92.3
Q ss_pred eEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHH
Q psy10879 21 FIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSF 100 (245)
Q Consensus 21 ~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l 100 (245)
.+-|+|++--....-++.|+.--.+.. ..++++.+-..+.+...+.+++-++++..+..+. .+ |. -.-.+.
T Consensus 6 ~vsViIp~yn~~~~l~~~l~Sl~~q~~--~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~--~~---n~--G~~~a~ 76 (240)
T 3bcv_A 6 KVSVIVPIYNVEKYLDQCVQALLAQTL--SDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH--KK---NA--GLGMAC 76 (240)
T ss_dssp SEEEEEEESSCTTTHHHHHHHHHTCSS--SSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE--CC---CC--CHHHHH
T ss_pred cEEEEEecCCCHHHHHHHHHHHHhCcC--CCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE--CC---CC--ChHHHH
Confidence 455555554322223334433333222 2456666654444333444444455666766442 11 21 123445
Q ss_pred HHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCCeee-cCC------CCccc----Cccc--
Q psy10879 101 KYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRARVR-RAG------KWKEK----NWFL-- 164 (245)
Q Consensus 101 ~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~~~~-r~~------k~~~~----~~~~-- 164 (245)
....+.++.+|++++|+|.++..+.|..++.........+.+|... ....+. .-. .++.. +...
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDL 156 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGG
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHH
Confidence 5555667889999999999999888887776654311344444321 111100 000 00000 0000
Q ss_pred CCCCC------Cc-cCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879 165 CDRYL------PY-ALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD 218 (245)
Q Consensus 165 ~~~yp------~y-~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~ 218 (245)
...-| .+ ..|++.++.+++++++--..........||..++.-+...|.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~ 217 (240)
T 3bcv_A 157 IASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVL 217 (240)
T ss_dssp TSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEEC
T ss_pred hhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEE
Confidence 00000 01 34788999999998852111111123469999987777666554443
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=94.55 E-value=0.56 Score=43.41 Aligned_cols=193 Identities=10% Similarity=0.041 Sum_probs=97.3
Q ss_pred eeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHH
Q psy10879 20 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS 99 (245)
Q Consensus 20 ~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~ 99 (245)
+.|-|+|++--.....+..++.--.+.. ....+++.+-..+.+...+ +.++......+..+. ..+ .+ .-.-.+
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~~q~~-~~~~eiivvDd~s~d~t~~-~~~~~~~~~~i~~i~-~~~--~~--~g~~~a 165 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLCNQKT-IYDYEVIVADDGSKENIEE-IVREFESLLNIKYVR-QKD--YG--YQLCAV 165 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHHTCCC-SSCEEEEEEEESCSSCHHH-HHHTTTTTSCEEEEE-ECC--CS--CCHHHH
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHhhcc-CCCeEEEEEeCCCchhHHH-HHHHhhhcCCeEEEE-eCC--CC--cchhHH
Confidence 4566777765432222334433322222 2245666665444432222 222322223444332 111 11 012234
Q ss_pred HHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec--CCCee--e-----------------------
Q psy10879 100 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD--GRARV--R----------------------- 152 (245)
Q Consensus 100 l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~--~~~~~--~----------------------- 152 (245)
+....+..+.+|++..|+|..+..+.|..++...........+|... ..... .
T Consensus 166 ~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (625)
T 2z86_A 166 RNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG 245 (625)
T ss_dssp HHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred HHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence 44455566889999999999999888888877654321334444321 00000 0
Q ss_pred -----cCCCCcccCc-----ccC-CCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879 153 -----RAGKWKEKNW-----FLC-DRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV 219 (245)
Q Consensus 153 -----r~~k~~~~~~-----~~~-~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~ 219 (245)
....|..... ... ..-..++.|++.++++++++.+--.......+..||..++.=+...|......+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 246 KVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp ------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred hhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence 0000110000 000 011124789999999999998743222333334799999988888887655443
No 9
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=94.22 E-value=2.3 Score=40.88 Aligned_cols=191 Identities=9% Similarity=-0.053 Sum_probs=99.5
Q ss_pred CCeeEEEEEeCCCCCHHH-HHHHHHHHcCCcCCCcEEEEEEeecCc-hHH--------------HHHHHHHhhhCCCEEE
Q psy10879 18 HSYFIVILILTSSKNYIR-RKNIRDTWIKNIEKYQVKYLFSIGNKE-NVV--------------DVKLKEEIRRYDDILL 81 (245)
Q Consensus 18 ~~~~lli~V~S~~~~~~~-R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~--------------~~~l~~E~~~~~Dii~ 81 (245)
+.+.+-|+|++--+...- ++.|+.--...-++.+.+++.+-..+. ++. ...+++-.+.++-.+
T Consensus 138 ~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~- 216 (802)
T 4hg6_A 138 ELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY- 216 (802)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE-
T ss_pred CCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE-
Confidence 346788888887655444 444444333222122244444433332 221 122332234444333
Q ss_pred cCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcC--cCCcccEEEEecC-CCee-ecC-CC
Q psy10879 82 LNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKF--HYEKKLYWGFFDG-RARV-RRA-GK 156 (245)
Q Consensus 82 ~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~--~~~~~~y~G~~~~-~~~~-~r~-~k 156 (245)
+. -.+ |...|. ..+....+.++.+|++.+|+|+.+..+.|.+.+.... +. -....|.... +..+ .++ +.
T Consensus 217 i~-~~~---~~~GKa-~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~-v~~V~~~~~~~~~~~~~~~~~~ 290 (802)
T 4hg6_A 217 ST-RER---NEHAKA-GNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPD-LFLVQTPHFFINPDPIQRNLAL 290 (802)
T ss_dssp EE-CSS---CCSHHH-HHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSS-CCEEECCCCBSSCCHHHHHHTC
T ss_pred EE-ecC---CCCcch-HHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCC-eEEEeccEEEeCCchHhhhhhH
Confidence 21 111 212333 3456666677899999999999999998888887763 32 2333333221 1111 010 11
Q ss_pred Cc---cc-C-ccc-----CC-CCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879 157 WK---EK-N-WFL-----CD-RYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD 218 (245)
Q Consensus 157 ~~---~~-~-~~~-----~~-~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~ 218 (245)
+. .. + ++. .+ .-.+++.|++.++.+++++.+-... .....||..++.-+.+.|.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~ 360 (802)
T 4hg6_A 291 GDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYI 360 (802)
T ss_dssp CTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEEC
T ss_pred HhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEe
Confidence 10 00 0 010 00 0113467899999999999873222 222359999998888888765543
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=92.62 E-value=1.1 Score=41.27 Aligned_cols=184 Identities=9% Similarity=-0.019 Sum_probs=92.7
Q ss_pred eeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHH
Q psy10879 20 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS 99 (245)
Q Consensus 20 ~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~ 99 (245)
+.+-|+|.+--....-++.|..--.+.. ..++++.+-..+.+...+.+.+-.+.+..+..+. . .|. -.-.+
T Consensus 375 ~~vsiii~~yn~~~~l~~~l~s~~~q~~--~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~--~---~n~--G~~~a 445 (625)
T 2z86_A 375 PLVSIYIPAYNCSKYIVRCVESALNQTI--TDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS--Q---KNK--GIGSA 445 (625)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHHSSSC--CSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE--E---CCC--CHHHH
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHhCcC--CCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe--C---CCC--CHHHH
Confidence 4555656554322223333333322221 2356666655444333344444445566665442 1 121 12344
Q ss_pred HHHHHhccceeEEEEecCceeeehHHHHHHHhhcC--cCCcccEEEEec---CCCeeecCC-CCcccCcccCCCCCCccC
Q psy10879 100 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKF--HYEKKLYWGFFD---GRARVRRAG-KWKEKNWFLCDRYLPYAL 173 (245)
Q Consensus 100 l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~--~~~~~~y~G~~~---~~~~~~r~~-k~~~~~~~~~~~yp~y~~ 173 (245)
+....+.++.+|++..|+|.++..+.|..++.... +. -.+..|... ........+ .|. .+........++.
T Consensus 446 ~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 522 (625)
T 2z86_A 446 SNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLS-LACVYTTNRNIDREGNLISNGYNWP--IYSREKLTSAMIC 522 (625)
T ss_dssp HHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTT-CSEEEEEEEEECTTSCEEEECCCCS--SCCHHHHTTSCCC
T ss_pred HHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCC-eeEEEeeeEEECCCCCEeccCcccc--cCCHHHHhhcccC
Confidence 55555666889999999999999988888876542 32 233334221 111111111 111 0000001112456
Q ss_pred CCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879 174 GGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD 218 (245)
Q Consensus 174 G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~ 218 (245)
|++.++.+++++.+-.... .....||.-+..-+...| .....
T Consensus 523 ~~~~~~~r~~~~~~ggfd~--~~~~~eD~dl~~r~~~~g-~~~~~ 564 (625)
T 2z86_A 523 HHFRMFTARAWNLTEGFNE--SISNAVDYDMYLKLSEVG-PFKHI 564 (625)
T ss_dssp CSCEEEEHHHHTTTTCCCS--SCSSCHHHHHHHHHTTTS-CEEEE
T ss_pred CceEEEEHHHHHHhCCCCC--ccCChHHHHHHHHHHHhC-CEEEe
Confidence 7788999988765432221 123569998876666667 44433
No 11
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=88.34 E-value=3.7 Score=32.47 Aligned_cols=105 Identities=15% Similarity=0.042 Sum_probs=64.5
Q ss_pred hccceeEEEEecCc---eeeehHHHHHHHhhcCcCCcccEEEEecCCCe--eecCCCCcccCcccCCCCCCccCCCeeee
Q psy10879 105 EHFDFQYLLKCDDD---TFVRVPNIIHELENKFHYEKKLYWGFFDGRAR--VRRAGKWKEKNWFLCDRYLPYALGGGYVL 179 (245)
Q Consensus 105 ~~~~~~~~~k~DDD---~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~--~~r~~k~~~~~~~~~~~yp~y~~G~gyvl 179 (245)
..-++++++.+|-| .-.+++.+.++|.. . .++.+|....... +......+....... =-.+|++|..++
T Consensus 50 ~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g-~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~--~V~d~~tGF~lI 123 (203)
T 2c0n_A 50 EMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---G-YDVVCGYYYLKTLRGYSVYRKDWEKEIFDG--EVNGCGLGFTFI 123 (203)
T ss_dssp HCTTCCEEEEECTTEEEEECCHHHHHHHHHH---T-CSEEEEECBCTTSSSBSEESSSBCSSCCCE--ECSEECSSEEEE
T ss_pred hcCCCCEEEEEeCCCCccccCHHHHHHHHhC---C-CCEEEEEeeccCCCccchHHHHHHHhccCc--eeeeccccEEEE
Confidence 34478999999999 99999999999944 2 6788887543211 100011111110000 013789999999
Q ss_pred cHHHHHHHHHhcc------cCCCCCCChhHHHHHHHhCCCeE
Q psy10879 180 SHLLVKFISENSH------MLSSYISEDVSVGVWLSALDITR 215 (245)
Q Consensus 180 S~~~~~~l~~~~~------~~~~~~~eDv~iG~~l~~~~v~~ 215 (245)
+|.++++|....- ..+..--||+++=..++..+-.+
T Consensus 124 kR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 124 KREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp EHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred hHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 9999999855432 12223358998877777655444
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=79.21 E-value=9.2 Score=31.80 Aligned_cols=93 Identities=16% Similarity=0.065 Sum_probs=52.5
Q ss_pred hccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCCeeeecHHHH
Q psy10879 105 EHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLV 184 (245)
Q Consensus 105 ~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyvlS~~~~ 184 (245)
+..+.+|++++|+|+.+..+.+.. .... .+..++ .... ++ .+. ..| ..+.|+..++++++.
T Consensus 126 ~~A~gd~i~flD~D~i~~~d~~~~---~~~~--~p~~~~------~~~~--~~----~~~-~~~-~~~~G~~~~~rr~~f 186 (287)
T 2fy7_A 126 KDYDYTCFVFSDVDLIPMNDHNAY---RCFS--QPRHIS------VAMD--KF----GFS-LPY-VQYFGGVSALSKQQF 186 (287)
T ss_dssp HHSCCCEEEEECTTEEESBTTSCC---SCCS--SCEECC------CEEG--GG----TTS-CSS-TTCCCSEEEEEHHHH
T ss_pred HhCCCCEEEEECCCcccCCCcceE---ecCC--CCceEE------Eeec--cc----ccC-CCc-CceeeeEEEEEHHHH
Confidence 556899999999999998885210 0000 110000 0000 00 010 011 235588899999998
Q ss_pred HHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879 185 KFISENSHMLSSYISEDVSVGVWLSALDITRY 216 (245)
Q Consensus 185 ~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~ 216 (245)
.++--.......+..||.-++.=+...|....
T Consensus 187 ~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~ 218 (287)
T 2fy7_A 187 LTINGFPNNYWGWGGEDDDIFNRLVFRGMSIS 218 (287)
T ss_dssp HHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCB
T ss_pred HHcCCCCccccccccchHHHHHHHHHcCCeEE
Confidence 88743333333345799999877777775544
No 13
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=51.57 E-value=46 Score=27.65 Aligned_cols=108 Identities=10% Similarity=0.015 Sum_probs=58.2
Q ss_pred HHHHHhccceeEEEEecCcee-eehHHHHHHHhhc--CcCCcccEEEEecCCC---ee----ec--CCCC---cccC---
Q psy10879 100 FKYIYEHFDFQYLLKCDDDTF-VRVPNIIHELENK--FHYEKKLYWGFFDGRA---RV----RR--AGKW---KEKN--- 161 (245)
Q Consensus 100 l~w~~~~~~~~~~~k~DDD~~-v~~~~L~~~L~~~--~~~~~~~y~G~~~~~~---~~----~r--~~k~---~~~~--- 161 (245)
+....+.++.+|++.+|+|.. +..+.|..++... .+. -.+..|...... .. .+ .++. ....
T Consensus 123 ~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~-~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (329)
T 3ckj_A 123 LWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDG-VHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLA 201 (329)
T ss_dssp HHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSS-CCEEEEEEECC---------------CHHHHHTHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCC-ccEEEEEecccccCCcccccccccCCCceehhhHHHHHH
Confidence 344445567899999999999 8888888877663 233 466777643211 00 01 1110 0000
Q ss_pred -cccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHH-HHHHHhCCC
Q psy10879 162 -WFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSV-GVWLSALDI 213 (245)
Q Consensus 162 -~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~i-G~~l~~~~v 213 (245)
.+..-.-..++.|+.+++++++++.+- ...-..+|..+ -.+++..|+
T Consensus 202 ~~~~~~~~~~~~~~g~~~~rr~~l~~i~-----f~~~~~~D~~l~~r~~~~~g~ 250 (329)
T 3ckj_A 202 ALRPELGCILQPLGGEYAATRELLTSVP-----FAPGYGVEIGLLVDTFDRLGL 250 (329)
T ss_dssp HHCGGGGGCSCTTCSCEEEEHHHHTTSC-----BCCGGGHHHHHHHHHHHHHCG
T ss_pred HhhhhhccccCCCccceeeeHHHHHhCC-----CCCCCcccHHHHHHHHHhcCC
Confidence 011001113456788999999998772 12222366655 344444454
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=44.72 E-value=24 Score=30.66 Aligned_cols=112 Identities=15% Similarity=0.069 Sum_probs=61.3
Q ss_pred HHHHHHHhccceeEEEEecCcee-eehHHHHHHHhhcC--cCCcccEEEEecCCC----eeec--CCC---CcccC----
Q psy10879 98 HSFKYIYEHFDFQYLLKCDDDTF-VRVPNIIHELENKF--HYEKKLYWGFFDGRA----RVRR--AGK---WKEKN---- 161 (245)
Q Consensus 98 ~~l~w~~~~~~~~~~~k~DDD~~-v~~~~L~~~L~~~~--~~~~~~y~G~~~~~~----~~~r--~~k---~~~~~---- 161 (245)
.++....+..+.+|++.+|.|.. +.++.|..++.... +. -.+..|...... ...+ .++ |....
T Consensus 169 ~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~-~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~ 247 (387)
T 3f1y_A 169 DAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPG-VRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNL 247 (387)
T ss_dssp HHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTT-CCEEEEEEECC-------CCBCCSHHHHHTHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCC-ceEEEEeeccccccccccccccCCchhhhhHHHHHHH
Confidence 34444445568899999999999 88888777776652 33 567777643211 0000 010 10000
Q ss_pred cccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCe
Q psy10879 162 WFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDIT 214 (245)
Q Consensus 162 ~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~ 214 (245)
.++.-.-...+.|+.+++++++++.+ . . ...+..|.-++..++++.|+.
T Consensus 248 ~~~~l~~~~d~~sG~~a~rR~~l~~i-~-f--~~gyg~e~ell~~~~~~~G~~ 296 (387)
T 3f1y_A 248 FYPELAGFVQPLAGEFVADRELFCSI-P-F--LTGYAVETGIMIDVLKKVGLG 296 (387)
T ss_dssp HCGGGTTCSCTTCSCEEEEHHHHTTS-C-E--ECSTTHHHHHHHHHHHHHCGG
T ss_pred HhHhhccccccccccEEEEHHHHHhC-C-C--CCCcchHHHHHHHHHHhcCCC
Confidence 01100001235688899999999887 1 1 233444444556666665654
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=38.22 E-value=2e+02 Score=24.91 Aligned_cols=126 Identities=13% Similarity=0.123 Sum_probs=70.6
Q ss_pred CchhHHHHHHHHHHHhccceeEEEEecCcee-eehHHHHHHHhhcCcCCcccEEEEecCC---CeeecC-CCCcccCccc
Q psy10879 90 SSLSQKVLHSFKYIYEHFDFQYLLKCDDDTF-VRVPNIIHELENKFHYEKKLYWGFFDGR---ARVRRA-GKWKEKNWFL 164 (245)
Q Consensus 90 ~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~-v~~~~L~~~L~~~~~~~~~~y~G~~~~~---~~~~r~-~k~~~~~~~~ 164 (245)
.....=...+++|+....+.++++.+|-|.- ..++-+.+++...... -++.+|..... ....+. .++.....|+
T Consensus 74 ~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g-~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~ 152 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG-YGLVRHYFPRASTDAMITWMITRTGFALLWP 152 (397)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT-CSEEEEECCCCTTSCHHHHHTHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcC-CCEEEEEeccccCCcHHHHHHHHHHHHHHHH
Confidence 4455557788888765668899999999994 7877777777655443 46677753211 110000 0000000111
Q ss_pred CC--CCCCccCCCeeeecHHHHHHHHHhc--ccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879 165 CD--RYLPYALGGGYVLSHLLVKFISENS--HMLSSYISEDVSVGVWLSALDITRYH 217 (245)
Q Consensus 165 ~~--~yp~y~~G~gyvlS~~~~~~l~~~~--~~~~~~~~eDv~iG~~l~~~~v~~~~ 217 (245)
.. .......++.+++++++++.+.... .....+ ..|+.+-..+.+.|.+..+
T Consensus 153 ~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~f-g~eiel~~~a~~~G~rI~E 208 (397)
T 2bo4_A 153 HTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDW-GIDTLYTFVTVQQGVSIYE 208 (397)
T ss_dssp TSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCST-THHHHHHHHHHHTTCCEEE
T ss_pred HhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCc-chHHHHHHHHHHcCCEEEE
Confidence 00 0112234677899999999986421 112222 3477776666666665544
No 16
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=35.28 E-value=61 Score=22.90 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=33.9
Q ss_pred EeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEE
Q psy10879 26 ILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDIL 80 (245)
Q Consensus 26 V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii 80 (245)
|.|....-+-|..||+-|-+-. ...++.++.....++.....+|++.-|=-+
T Consensus 55 vrtvedkedfrenireiweryp---qldvvvivttddkewikdfieeakergvev 106 (162)
T 2l82_A 55 VRTVEDKEDFRENIREIWERYP---QLDVVVIVTTDDKEWIKDFIEEAKERGVEV 106 (162)
T ss_dssp EEECCSHHHHHHHHHHHHHHCT---TCCEEEEEECCCHHHHHHHHHHHHHTTCEE
T ss_pred eeeeccHHHHHHHHHHHHHhCC---CCcEEEEEecCcHHHHHHHHHHHHhcCcEE
Confidence 4455556667888999998765 234555555544666667777887777544
No 17
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=30.96 E-value=1.3e+02 Score=24.32 Aligned_cols=84 Identities=17% Similarity=0.294 Sum_probs=47.7
Q ss_pred HHHHHHHHHhcc-c----eeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCC---CeeecCCC---CcccCccc
Q psy10879 96 VLHSFKYIYEHF-D----FQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGR---ARVRRAGK---WKEKNWFL 164 (245)
Q Consensus 96 ~~~~l~w~~~~~-~----~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~---~~~~r~~k---~~~~~~~~ 164 (245)
--.+|+|+.++. . .--+.++|||.-..+ .|.+.++....- .-.-+|.+.+. .+...++| |... |-+
T Consensus 83 Rn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l-~LF~emR~i~~v-gvWPVglvg~~~~EgPv~~~gkVvGw~t~-w~~ 159 (246)
T 2d0j_A 83 RNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSL-ELFQEMRTTRKV-SVWPVGLVGGRRYERPLVENGKVVGWYTG-WRA 159 (246)
T ss_dssp HHHHHHHHHHHSCSSSCCCCEEEECCTTCEECT-HHHHHHTTCSSE-EECCEEEETTEEEEEEEEETTEEEEEECS-SCT
T ss_pred HHHHHHHHHHhcccccCccceEEEccCCCcccH-HHHHHHhhhcee-eEEEEEeecCcceecceeeCCEecceecc-cCC
Confidence 347889998886 2 467899999998888 455656654332 22333443321 11222444 3321 222
Q ss_pred CCCCCCccCCCeeeecHHHH
Q psy10879 165 CDRYLPYALGGGYVLSHLLV 184 (245)
Q Consensus 165 ~~~yp~y~~G~gyvlS~~~~ 184 (245)
.-.|| ..-+||.++..++
T Consensus 160 ~R~fp--iDmAGFA~N~~ll 177 (246)
T 2d0j_A 160 DRPFA--IDMAGFAVSLQVI 177 (246)
T ss_dssp TSTTC--CCGGGEEEEHHHH
T ss_pred CCcCc--ccceeeEeehhhh
Confidence 22232 5678999998854
No 18
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=21.67 E-value=19 Score=33.79 Aligned_cols=111 Identities=13% Similarity=-0.014 Sum_probs=0.0
Q ss_pred HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCC---eeecCCCCcccCcccCCCC----CC
Q psy10879 98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRA---RVRRAGKWKEKNWFLCDRY----LP 170 (245)
Q Consensus 98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~---~~~r~~k~~~~~~~~~~~y----p~ 170 (245)
.++....+.++.+|++.+|+|.++..+.|..++.... . .++.+|...... ............++....+ -.
T Consensus 73 ~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~-~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (729)
T 3l7i_A 73 HARNIALEEVETPYFMFLDADDELASYAITFYLEKFN-N-TDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLR 150 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-C-CCEEEEeeEEeecCCCccccccceeeeeecchhhHHHHhh
Confidence 3444455556889999999999999888888877766 3 455555432110 0000000000011111111 11
Q ss_pred ccCCCeeeecHHHHHHHH-HhcccCCCCCCChhHHHHHHHhCC
Q psy10879 171 YALGGGYVLSHLLVKFIS-ENSHMLSSYISEDVSVGVWLSALD 212 (245)
Q Consensus 171 y~~G~gyvlS~~~~~~l~-~~~~~~~~~~~eDv~iG~~l~~~~ 212 (245)
.+.+++.++.+++++.+- ...... ...||..+..-+...|
T Consensus 151 ~~~~~~~~~rr~~l~~~gl~fde~~--~~~ED~d~~~rl~~~g 191 (729)
T 3l7i_A 151 KQSACNIIFRTAIVRAHHIRFNENL--NTYVDWSFVLEYMKYV 191 (729)
T ss_dssp -------------------------------------------
T ss_pred ccchhheeeeHHHHHHcCCCcCCCC--CcccCHHHHHHHHHhc
Confidence 345677888888887643 111111 2478887764444444
No 19
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=20.52 E-value=1.1e+02 Score=25.49 Aligned_cols=38 Identities=18% Similarity=0.363 Sum_probs=29.7
Q ss_pred ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec
Q psy10879 108 DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD 146 (245)
Q Consensus 108 ~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~ 146 (245)
+.+-++-+|||+.+..+.|...+.--... .+-++|...
T Consensus 106 ~T~AVLslDDDv~l~~~el~faF~vWr~~-PdRlVGf~~ 143 (293)
T 1omz_A 106 ETNAVLMVDDDTLISAQDLVFAFSIWQQF-PDQIIGFVP 143 (293)
T ss_dssp CSSEEEEECTTEEECHHHHHHHHHHHTTS-TTSEEESCE
T ss_pred CcCEEEEEcCCCCCCHHHHHHHHHHHHHC-ccceecCch
Confidence 67889999999999999998777665544 456777643
Done!