Query psy1088
Match_columns 905
No_of_seqs 554 out of 2796
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 20:46:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1088.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1088hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3867|consensus 100.0 3.1E-66 6.7E-71 583.3 30.3 328 56-383 26-373 (528)
2 TIGR03417 chol_sulfatase choli 100.0 7E-58 1.5E-62 536.3 30.4 371 58-469 1-422 (500)
3 PRK13759 arylsulfatase; Provis 100.0 1.4E-55 2.9E-60 515.1 29.0 378 56-472 3-444 (485)
4 COG3119 AslA Arylsulfatase A a 100.0 9.4E-51 2E-55 472.4 27.7 392 58-468 3-443 (475)
5 PF00884 Sulfatase: Sulfatase; 100.0 1.9E-41 4.1E-46 373.3 21.4 299 60-382 1-308 (308)
6 KOG3731|consensus 100.0 7.4E-39 1.6E-43 342.5 22.0 317 55-403 30-385 (541)
7 PRK12363 phosphoglycerol trans 100.0 3.4E-33 7.3E-38 327.8 27.4 300 57-401 154-460 (703)
8 PRK03776 phosphoglycerol trans 100.0 1E-32 2.2E-37 323.4 26.9 300 56-399 158-466 (762)
9 PRK09598 lipid A phosphoethano 100.0 9.1E-31 2E-35 304.2 24.6 268 57-387 221-507 (522)
10 PRK10649 hypothetical protein; 100.0 1.1E-29 2.4E-34 299.7 21.9 285 58-398 235-543 (577)
11 COG3083 Predicted hydrolase of 100.0 3.6E-29 7.8E-34 272.7 21.9 292 55-412 255-548 (600)
12 PRK11598 putative metal depend 99.9 6.5E-27 1.4E-31 272.6 23.6 273 58-391 232-534 (545)
13 PRK11560 phosphoethanolamine t 99.9 2.1E-26 4.6E-31 268.2 25.4 270 58-386 246-541 (558)
14 COG1368 MdoB Phosphoglycerol t 99.9 2.1E-22 4.5E-27 242.9 16.5 287 57-383 259-553 (650)
15 cd00016 alkPPc Alkaline phosph 99.7 4.5E-16 9.8E-21 175.2 22.3 294 56-382 3-384 (384)
16 COG2194 Predicted membrane-ass 99.7 1.3E-16 2.9E-21 185.4 16.0 273 58-383 230-528 (555)
17 PRK05362 phosphopentomutase; P 99.7 1.5E-15 3.2E-20 169.6 18.5 177 135-399 216-392 (394)
18 PF01663 Phosphodiest: Type I 99.6 7.1E-16 1.5E-20 174.5 8.3 234 62-321 1-248 (365)
19 TIGR01307 pgm_bpd_ind 2,3-bisp 99.6 3.4E-14 7.3E-19 162.3 19.5 194 141-391 303-497 (501)
20 PF02995 DUF229: Protein of un 99.6 8.6E-14 1.9E-18 162.6 20.2 272 56-383 123-407 (497)
21 KOG2645|consensus 99.6 5.3E-14 1.2E-18 157.3 17.3 292 55-397 18-398 (418)
22 TIGR02335 hydr_PhnA phosphonoa 99.5 7.6E-14 1.6E-18 159.0 13.4 220 58-320 11-242 (408)
23 TIGR01696 deoB phosphopentomut 99.5 4.3E-13 9.3E-18 148.4 18.3 168 135-386 209-376 (381)
24 PRK12383 putative mutase; Prov 99.5 1.2E-12 2.6E-17 146.3 17.6 174 136-400 228-401 (406)
25 TIGR03397 acid_phos_Burk acid 99.4 4E-12 8.6E-17 144.4 19.6 92 284-386 364-456 (483)
26 PRK05434 phosphoglyceromutase; 99.4 2.2E-12 4.8E-17 148.7 16.8 136 220-396 370-505 (507)
27 COG1524 Uncharacterized protei 99.2 4E-11 8.6E-16 139.9 12.7 74 56-132 35-110 (450)
28 PF01676 Metalloenzyme: Metall 99.2 6.3E-11 1.4E-15 127.1 10.4 126 220-388 123-248 (252)
29 PLN02538 2,3-bisphosphoglycera 99.2 4.9E-10 1.1E-14 128.6 17.9 208 142-393 341-555 (558)
30 KOG2125|consensus 99.1 3E-10 6.6E-15 130.0 10.2 260 57-393 48-316 (760)
31 PRK10518 alkaline phosphatase; 98.9 4E-08 8.7E-13 112.3 20.1 134 223-383 327-476 (476)
32 KOG2126|consensus 98.9 4.4E-09 9.5E-14 123.8 12.1 258 62-398 61-333 (895)
33 COG1015 DeoB Phosphopentomutas 98.8 9.5E-08 2.1E-12 103.0 15.6 165 136-383 220-384 (397)
34 COG3379 Uncharacterized conser 98.7 3.1E-08 6.8E-13 107.3 9.2 99 60-161 4-110 (471)
35 PF04185 Phosphoesterase: Phos 98.7 2.9E-07 6.2E-12 104.8 15.3 259 72-383 112-376 (376)
36 COG1785 PhoA Alkaline phosphat 98.7 1.7E-06 3.8E-11 97.8 20.8 294 55-383 55-480 (482)
37 KOG2124|consensus 98.7 1.1E-07 2.4E-12 112.0 11.5 260 60-389 44-329 (883)
38 KOG4513|consensus 98.6 9.5E-07 2E-11 94.5 14.8 196 142-391 327-526 (531)
39 smart00098 alkPPc Alkaline pho 98.5 1.1E-06 2.3E-11 100.0 13.4 228 60-320 1-311 (419)
40 PF00245 Alk_phosphatase: Alka 98.4 7.9E-07 1.7E-11 101.7 9.9 133 223-382 240-421 (421)
41 COG0696 GpmI Phosphoglyceromut 98.3 4.4E-06 9.6E-11 93.4 13.3 135 218-391 369-503 (509)
42 COG3635 Predicted phosphoglyce 98.1 0.00014 3.1E-09 79.3 17.9 120 220-381 278-407 (408)
43 PRK04200 cofactor-independent 97.9 0.00059 1.3E-08 77.8 18.4 80 241-358 284-364 (395)
44 PF14707 Sulfatase_C: C-termin 97.9 8.2E-06 1.8E-10 78.6 2.9 28 525-554 1-28 (131)
45 KOG4126|consensus 97.7 0.0012 2.6E-08 74.8 17.4 74 223-320 328-401 (529)
46 TIGR03396 PC_PLC phospholipase 97.6 0.0025 5.5E-08 76.7 19.0 251 81-383 145-427 (690)
47 PRK04024 cofactor-independent 97.4 0.001 2.2E-08 76.1 11.3 105 240-383 293-407 (412)
48 PF11658 DUF3260: Protein of u 97.2 0.033 7.1E-07 63.7 20.1 265 61-383 197-472 (518)
49 TIGR03368 cellulose_yhjU cellu 96.7 0.078 1.7E-06 60.4 18.3 268 59-383 193-469 (518)
50 TIGR00306 apgM 2,3-bisphosphog 96.3 0.019 4E-07 65.7 10.5 78 242-358 289-366 (396)
51 PF08665 PglZ: PglZ domain; I 96.3 0.0078 1.7E-07 61.4 6.3 52 61-121 2-58 (181)
52 PRK13759 arylsulfatase; Provis 96.2 0.0037 8.1E-08 73.9 4.0 37 494-531 356-392 (485)
53 TIGR02535 hyp_Hser_kinase prop 95.9 0.054 1.2E-06 62.0 11.2 60 280-358 306-366 (396)
54 PF07394 DUF1501: Protein of u 95.7 0.03 6.5E-07 64.4 8.3 92 279-383 264-366 (392)
55 TIGR03417 chol_sulfatase choli 95.6 0.0092 2E-07 70.9 3.8 17 677-693 406-422 (500)
56 PRK04135 cofactor-independent 95.1 0.13 2.9E-06 58.2 10.8 99 242-382 281-389 (395)
57 PF14707 Sulfatase_C: C-termin 92.9 0.036 7.8E-07 53.3 0.6 25 448-472 55-80 (131)
58 KOG3867|consensus 90.1 0.25 5.4E-06 57.8 3.7 44 571-618 376-419 (528)
59 PRK04024 cofactor-independent 79.1 2.7 5.8E-05 48.5 5.1 38 61-98 4-45 (412)
60 PRK04135 cofactor-independent 78.4 3.2 6.9E-05 47.3 5.3 40 59-99 7-50 (395)
61 TIGR02535 hyp_Hser_kinase prop 77.7 3.1 6.8E-05 47.7 5.2 40 61-100 2-45 (396)
62 PF06375 BLVR: Bovine leukaemi 73.9 1 2.3E-05 44.1 0.0 10 876-885 125-134 (154)
63 TIGR00306 apgM 2,3-bisphosphog 70.6 4.3 9.3E-05 46.6 4.0 37 63-99 1-41 (396)
64 TIGR02687 conserved hypothetic 62.4 13 0.00028 46.9 6.2 37 279-321 595-631 (844)
65 KOG1059|consensus 61.2 1.5 3.3E-05 52.2 -2.1 13 82-94 135-148 (877)
66 COG4102 Uncharacterized protei 60.8 26 0.00056 38.7 7.2 59 240-320 269-328 (418)
67 KOG2572|consensus 51.3 5.6 0.00012 44.3 0.4 7 294-300 268-274 (498)
68 COG3379 Uncharacterized conser 49.4 26 0.00057 39.6 5.1 37 349-388 423-459 (471)
69 KOG2422|consensus 49.3 8.9 0.00019 45.0 1.6 9 861-869 138-146 (665)
70 PF10500 SR-25: Nuclear RNA-sp 46.7 30 0.00065 35.9 4.7 25 807-831 171-201 (225)
71 KOG1059|consensus 41.8 6.8 0.00015 47.0 -0.8 8 342-349 439-446 (877)
72 KOG3794|consensus 37.5 28 0.0006 38.9 3.0 11 541-551 126-136 (453)
73 PF08496 Peptidase_S49_N: Pept 35.1 24 0.00052 34.9 1.9 18 861-878 113-130 (155)
74 PRK13366 protocatechuate 4,5-d 32.5 79 0.0017 34.7 5.6 59 245-320 5-63 (284)
75 PF15333 TAF1D: TATA box-bindi 31.8 51 0.0011 33.7 3.6 13 822-834 50-62 (217)
76 KOG4055|consensus 30.9 36 0.00077 34.0 2.3 26 812-837 108-133 (213)
77 PF08432 Vfa1: AAA-ATPase Vps4 28.5 67 0.0015 32.7 4.0 23 814-836 65-87 (182)
78 KOG1230|consensus 27.4 46 0.00099 37.8 2.7 13 861-873 40-52 (521)
79 KOG2573|consensus 27.3 40 0.00087 37.9 2.2 19 514-532 336-354 (498)
80 KOG2002|consensus 26.6 61 0.0013 40.6 3.7 11 589-599 712-722 (1018)
81 KOG2572|consensus 26.0 38 0.00082 38.1 1.7 11 110-120 59-69 (498)
82 COG3511 PlcC Phospholipase C [ 24.3 1.2E+03 0.027 27.6 14.7 73 81-155 154-230 (527)
83 PF15086 UPF0542: Uncharacteri 24.3 77 0.0017 26.9 2.8 13 822-834 43-55 (74)
84 PF10198 Ada3: Histone acetylt 23.1 95 0.0021 29.9 3.6 18 813-830 69-86 (131)
85 KOG3794|consensus 23.0 66 0.0014 36.1 2.8 12 278-289 43-54 (453)
86 PF08229 SHR3_chaperone: ER me 22.7 49 0.0011 34.0 1.7 9 704-712 150-158 (196)
87 PF05991 NYN_YacP: YacP-like N 22.5 71 0.0015 32.0 2.8 32 286-320 77-108 (166)
88 PF08639 SLD3: DNA replication 22.0 1.4E+02 0.0031 35.5 5.7 15 861-875 221-235 (497)
89 KOG4043|consensus 21.2 53 0.0012 32.1 1.5 6 726-731 177-182 (214)
90 PRK14552 C/D box methylation g 21.1 48 0.001 38.3 1.4 21 281-301 144-164 (414)
No 1
>KOG3867|consensus
Probab=100.00 E-value=3.1e-66 Score=583.35 Aligned_cols=328 Identities=39% Similarity=0.646 Sum_probs=293.4
Q ss_pred CCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCcccccc---
Q psy1088 56 SSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLY--- 131 (905)
Q Consensus 56 ~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~--- 131 (905)
+.++||||||++||+|+.+++|||+..+.|||||+||++|+.|+|+|+ ++.|||||++||||+||+++||++....
T Consensus 26 ~~~~PNillIlaDDlG~gDlg~yG~~~i~TPniD~LA~~Gv~f~n~~~a~s~CtPSRaalLTGr~pirtGm~~~~~~r~~ 105 (528)
T KOG3867|consen 26 STDPPNILLILADDLGWGDLGCYGNKTIRTPNIDRLAAEGLLFTNAYAAVSLCSPSRAALLTGRYPIRTGMYHSVIYRVH 105 (528)
T ss_pred CCCCCCEEEEEEccCCCcccccCCCcccCCCCHHHHHhcccceecccccccccCchHHHHhcCCCccccccccceeEeec
Confidence 678999999999999999999999999999999999999999999999 5799999999999999999999998776
Q ss_pred -CCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccc------cCCCCcCCchhHh------
Q psy1088 132 -GCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYW------TGHQDYFDHSAEE------ 198 (905)
Q Consensus 132 -~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~------~~~~~y~~~~~~~------ 198 (905)
...+.++|.++++|+++|+++||.|++|||||+|.....+.|+.||||.++|+. .+..+++......
T Consensus 106 ~~~~~gglP~~E~tlae~l~~~GY~T~liGKWHLG~~~~~~~P~~rGFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (528)
T KOG3867|consen 106 HNFSPGGLPLNETTLAEILQEAGYSTGLIGKWHLGRSDPCYHPTNRGFDYFYGEPELHSPLLGPRDVLDVPEQALQFLGK 185 (528)
T ss_pred cCCCCCCcccchhHHHHHHHhCCccccccccccCCCCCCCcCCcccCccccccccccccccccccccccccchhhhhhcc
Confidence 578899999999999999999999999999999988999999999999999983 4444444332211
Q ss_pred hh--hhccccccCCCcccccCCCcccHHHHHHHHHHHHcC-CCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccch
Q psy1088 199 MK--MWGLDMRRDLEPAWDLHGKYSTDVFTAEAVDIIHNH-STDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIED 275 (905)
Q Consensus 199 ~~--~~g~d~~~~~~~~~~~~~~~~d~~~~d~a~~~I~~~-~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~ 275 (905)
.. ..++++..+..........+.+..+++.++..|+.+ ..++|+|++.....+|......|+.++.++.....+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~l~v~~p~~~~~~f~~~ 265 (528)
T KOG3867|consen 186 LKVSAKPFFLREGLHVPHRPGWYSSTGLPTFGACYLMRNHGLSEQPMFLYWAPPAAHKEAMDSPLHVHVPLFTPKTFAGR 265 (528)
T ss_pred cCccccchhhhhhcccccccCCccccccccchhhhhhhccCcCCCCceeeccchhhcccccccccccCccccCCccccch
Confidence 00 123445555555555556677778889999999977 568999999999999998888889999998888888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCC
Q psy1088 276 FKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPL 355 (905)
Q Consensus 276 ~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg 355 (905)
..+..|.++|.++|.+||+++++|++.|+++||||+||||||..+.+...+.++|+|++|.+...||+++|+|.++|||+
T Consensus 266 s~~~~y~~~V~~mD~~VG~ildaL~~~gl~nnTiv~FtSDnG~~~~~~~~~~~~n~~~~g~~~~~weggir~~~~~~~p~ 345 (528)
T KOG3867|consen 266 SKRGLYGDMVSEMDWSVGRILDALDDLGLANNTLVIFTSDNGGPLEGGRGNGGSNGPWNGIKKPGWEGGIRVPGLARWPG 345 (528)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEeCCCCccccCccccccccCCccceecCCccccCCCcchhcCcc
Confidence 89999999999999999999999999999999999999999999988887888999999999999999999999999999
Q ss_pred CcCCCeEEecceEehhHHHHHHHHhCCC
Q psy1088 356 LESRGIVAEQYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 356 ~~~~g~v~~~~vs~vDI~PTLl~laGi~ 383 (905)
..++|+++.+++|++||+||+++++|++
T Consensus 346 ~~~~g~v~~e~~s~~D~~PTl~~lag~~ 373 (528)
T KOG3867|consen 346 VVPAGQVSNELTSLLDILPTLADLAGGP 373 (528)
T ss_pred ccccceeccccccccccchHHHHHcCCC
Confidence 9999999999999999999999999998
No 2
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=100.00 E-value=7e-58 Score=536.28 Aligned_cols=371 Identities=23% Similarity=0.333 Sum_probs=270.4
Q ss_pred CCCeEEEEEecCCCCCcccCCCC-CCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCCC
Q psy1088 58 GPPHIIFILADDLGWNDVGFHGL-DQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCER 135 (905)
Q Consensus 58 ~~PNIVlI~~D~lr~d~l~~~G~-~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~ 135 (905)
++||||||++|++|++.++++|+ ..+.|||||+||++|+.|+|+|+ +|+|+|||+|||||+||.+||+..+.
T Consensus 1 ~rPNIllI~~Dd~r~d~lg~~G~~~~~~TPnLD~LA~eGv~F~nay~~~p~C~PSRaSllTG~yp~~~G~~~~~------ 74 (500)
T TIGR03417 1 TRPNILILMADQLNGTLLPDYGPARWLHAPNLKRLAARSVVFDNAYCASPLCAPSRASFMSGQLPSRTGAYDNA------ 74 (500)
T ss_pred CCCeEEEEEeCCCCccccccCCCCCcCCCCcHHHHHHhCceecccccCCCccHHHHHHHHHCCCHHhcCcccch------
Confidence 47999999999999999999998 78999999999999999999998 79999999999999999999997653
Q ss_pred CCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCcccccccccc-----CC-CCcCCchhHhhhhhccccc--
Q psy1088 136 GGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWT-----GH-QDYFDHSAEEMKMWGLDMR-- 207 (905)
Q Consensus 136 ~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~-----~~-~~y~~~~~~~~~~~g~d~~-- 207 (905)
..++...+||+++|+++||+|+++||||+.... ..+||+..+.... +. .+|... .....|...+.
T Consensus 75 ~~l~~~~~tl~~~L~~aGY~T~~~GK~H~~~~~-----~~~GF~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 147 (500)
T TIGR03417 75 AEFPSDIPTYAHYLRRAGYRTALSGKMHFCGPD-----QLHGFEERLTTDIYPADFGWTPDWRKP--GERIDWYHNMGSV 147 (500)
T ss_pred hhcCcCCCCHHHHHHHCCCeEEEeccccccCCc-----cccCcccccccccCccccCCCcccccc--ccccccccccccc
Confidence 236777899999999999999999999984311 2468876432110 00 011000 00000100000
Q ss_pred cCCCcccccCCCcccHHHHHHHHHHHHc---CCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccc----------
Q psy1088 208 RDLEPAWDLHGKYSTDVFTAEAVDIIHN---HSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIE---------- 274 (905)
Q Consensus 208 ~~~~~~~~~~~~~~d~~~~d~a~~~I~~---~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~---------- 274 (905)
..............++.+++.+++||.. ...++||||++++.+||. ||.+|++|.+.|.+..
T Consensus 148 ~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~kPFFl~vs~~~PH~-----P~~~p~~y~~~y~~~~~~~p~~~~~~ 222 (500)
T TIGR03417 148 TGAGPCERTNQLDYDDEVAFHARQKLYDLARGKDARPFCLTVSFTHPHD-----PYVIRRKYWDLYEDCEILMPEVAIPY 222 (500)
T ss_pred ccCCcCcccccccCCHHHHHHHHHHHHHHhhccCCCCeEEEecCCCCcC-----CCcCCHHHHhhcCcccCCCCCCCCcc
Confidence 0000000011112345678899999974 245799999999999999 9999988877664310
Q ss_pred --------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCC
Q psy1088 275 --------------------------DFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAA 328 (905)
Q Consensus 275 --------------------------~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~g 328 (905)
...++.|+++|+++|.+||+|+++|++.|++||||||||||||..+++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~il~~L~~~g~~dnTivvf~sDHG~~~G~~g~--- 299 (500)
T TIGR03417 223 AEQDPHSQRLLDACDLWNFPITDEQIRRARRAYFGAISYLDDKIGELLQTLEETRQADDTIVLFTSDHGDMLGERGL--- 299 (500)
T ss_pred cccChhhhhhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcEEEEECCCchhhccCCc---
Confidence 012467999999999999999999999999999999999999998855441
Q ss_pred CCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHHhCCCCCCCcc-cccccccccccccccccc
Q psy1088 329 SNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSAANKSDIPNYV-NSTVENIIPRYENSILRY 407 (905)
Q Consensus 329 sn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~laGi~~~P~~~-~g~g~sl~p~~~~~~~~~ 407 (905)
+ .|.++||+++||||||++|+..++++ ++.+++++||+||||+++|++ +|... .-+|+||+|.+.+...
T Consensus 300 ----~--~K~~~ye~~~~vPlii~~p~~~~~~~-~~~~v~~~Di~pTil~l~g~~-~~~~~~~~~G~SL~~~l~g~~~-- 369 (500)
T TIGR03417 300 ----W--YKMSFFEGSARVPLMVHAPGRFAPGR-VAAPVSTVDLLPTLVDLAGGD-MDEVLPWTDGRSLVPHLQGKGG-- 369 (500)
T ss_pred ----c--cccCcccccceEeEEEEeCCCCCCcc-cCCceeehhHHHHHHHHhCCC-CcccCCCCCCeehHHHhcCCCC--
Confidence 1 47899999999999999999655454 578999999999999999999 77542 2467999987643210
Q ss_pred cCCcccccCC-ccccccccccCCccccCCceeecccCCcccCCCCccccccCCcccccCCCCC
Q psy1088 408 ENGTHEYNSP-RIENSNTRYENGTHEYNPKYENRYENGTHEYNPKYENRYENGTHEYNGPKNE 469 (905)
Q Consensus 408 ~~~~~~~~~~-~~~~~~~r~~~g~~~~~~kyi~~~~~~~~~~~~~eLYDl~~DP~E~~NLa~e 469 (905)
+.+.+. +..+.......+++..+||||+... +.+|||||++||.|++|||+.
T Consensus 370 ----~~~v~~e~~~~~~~~~~~~ir~~~~K~i~~~~------~~~eLyDL~~DP~E~~NLa~~ 422 (500)
T TIGR03417 370 ----HDPVIGEYAAEGSYAPLVMIRRGRYKFVYCEA------DPDQLYDLEADPHELTNLADD 422 (500)
T ss_pred ----CCeEEEEEecCCCcccceEEEcCCeEEEEecC------ChhhhcCcccCcchhhhcccC
Confidence 111111 1110000112235667999997532 346899999999999999984
No 3
>PRK13759 arylsulfatase; Provisional
Probab=100.00 E-value=1.4e-55 Score=515.10 Aligned_cols=378 Identities=25% Similarity=0.368 Sum_probs=274.7
Q ss_pred CCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCC
Q psy1088 56 SSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCE 134 (905)
Q Consensus 56 ~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~ 134 (905)
..++||||||++|++|+++++++|+..+.|||||+||++|+.|+|+|+ +++|+|||+|||||+||.+||+.++..
T Consensus 3 ~~~rPNIl~I~~Ddlr~d~l~~~G~~~~~TPnld~La~~G~~F~nay~~~p~c~psr~sl~TG~yp~~~g~~~~~~---- 78 (485)
T PRK13759 3 QTKKPNIILIMVDQMRGDCLGCNGNKAVETPNLDMLASEGYNFENAYSAVPSCTPARAALLTGLSQWHHGRVGYGD---- 78 (485)
T ss_pred CCCCCCEEEEEECCCCHHHHHhcCCCcCCCccHHHHHhcCceeeceecCCCcchhhHHHHHhcCChhhcCcccccc----
Confidence 346899999999999999999999988999999999999999999998 699999999999999999999865421
Q ss_pred CCCCCC-CCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccc---cccCCC-------CcCCchhHhh----
Q psy1088 135 RGGLPL-SEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLG---YWTGHQ-------DYFDHSAEEM---- 199 (905)
Q Consensus 135 ~~~l~~-~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g---~~~~~~-------~y~~~~~~~~---- 199 (905)
.++. ..+||++.|+++||+|++|||||++.. ...+||+.++. +..... ++........
T Consensus 79 --~~~~~~~~tl~~~l~~~GY~T~~~GK~h~~~~-----~~~~gfd~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (485)
T PRK13759 79 --VVPWNYKNTLPQEFRDAGYYTQCIGKMHVFPQ-----RNLLGFHNVLLHDGYLHSGRNEDKSQFDFVSDYLAWLREKA 151 (485)
T ss_pred --cccccccchHHHHHHHcCCeeEEecccccCCC-----cccCCccceeccccccccccccCcccccccchHHHHhhhhc
Confidence 1222 468999999999999999999998642 12468876431 110000 0000000000
Q ss_pred hhhcccccc-----C---CCcccccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhcc
Q psy1088 200 KMWGLDMRR-----D---LEPAWDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHR 271 (905)
Q Consensus 200 ~~~g~d~~~-----~---~~~~~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~ 271 (905)
...+..+.. . ..........+.+..+++.|++||++++.++|||+++++.+||. ||.+|+.|.+.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~kPfFl~v~~~~pH~-----P~~~p~~~~~~y~ 226 (485)
T PRK13759 152 PGKDPDLTDIGWDCNSWVARPWDLEERLHPTNWVGSESIEFLRRRDPTKPFFLKMSFARPHS-----PYDPPKRYFDMYK 226 (485)
T ss_pred CCCCCcccccccccccccccccccccceeccHHHHHHHHHHHHhCCCCCCeEEEeCCCCCcC-----CCCCCHHHHHhcc
Confidence 000000000 0 00000012234567789999999997656899999999999999 9999988877764
Q ss_pred ccc----------------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCC
Q psy1088 272 HIE----------------------------------DFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNG 317 (905)
Q Consensus 272 ~~~----------------------------------~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG 317 (905)
... ...++.|.++|+++|.+||+|+++|++.|++||||||||||||
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~l~~~l~~~g~~dnTiiv~tsDHG 306 (485)
T PRK13759 227 DADIPDPHIGDWEYAEDQDPEGGSIDALRGNLGEEYARRARAAYYGLITHIDHQIGRFLQALKEFGLLDNTIILFVSDHG 306 (485)
T ss_pred ccCCCCCCCCchhhhcccccccccchhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCeEEEEECCCc
Confidence 320 1125679999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCC---cCCCeEEecceEehhHHHHHHHHhCCCCCCCccccccc
Q psy1088 318 GAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLL---ESRGIVAEQYVHVSDWLPTLLSAANKSDIPNYVNSTVE 394 (905)
Q Consensus 318 ~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~---~~~g~v~~~~vs~vDI~PTLl~laGi~~~P~~~~g~g~ 394 (905)
..+++++ .+ .|.++|++++||||||++|+. .+++++++.+++++||+||||+++|++ .|..+ +|+
T Consensus 307 ~~~g~~~-------~~--~k~~~~e~~~rVPlii~~p~~~~~~~~g~~~~~~v~~~Di~pTil~l~g~~-~p~~~--~G~ 374 (485)
T PRK13759 307 DMLGDHY-------LF--RKGYPYEGSAHIPFIIYDPGGLLAGNRGTVIDQVVELRDIMPTLLDLAGGT-IPDDV--DGR 374 (485)
T ss_pred ccccccc-------cc--cCCccccccceeeEEEecCCcccccCCCceecCcceecchHHHHHHHhCCC-CCcCc--CCc
Confidence 9874433 22 367899999999999999984 245777899999999999999999999 77765 458
Q ss_pred ccccccccccccccCCcccccCC-ccccccccccCCccccCCceeecccCCcccCCCCccccccCCcccccCCCC--CCC
Q psy1088 395 NIIPRYENSILRYENGTHEYNSP-RIENSNTRYENGTHEYNPKYENRYENGTHEYNPKYENRYENGTHEYNGPKN--ENT 471 (905)
Q Consensus 395 sl~p~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~g~~~~~~kyi~~~~~~~~~~~~~eLYDl~~DP~E~~NLa~--e~p 471 (905)
||+|.+.+.-.. .+.+... +..... ....++..+||||+.... +.++||||++||.|++||+. +++
T Consensus 375 sl~~~l~g~~~~----~r~~~~~~~~~~~~--~~~~ir~~~~K~i~~~~~-----~~~eLYDL~~DP~E~~NLa~~~~~~ 443 (485)
T PRK13759 375 SLKNLIFGQYEG----WRPYLHGEHALGYS--SDNYLTDGKWKYIWFSQT-----GEEQLFDLKKDPHELHNLSPSEKYQ 443 (485)
T ss_pred cchhhhcCCCcc----ccceeeeecccccC--CcceEEcCCeEEEEeCCC-----CHhhccCcccCcchhhhhccCHhHH
Confidence 888876542111 1121111 100000 001166779999986543 24689999999999999997 345
Q ss_pred C
Q psy1088 472 N 472 (905)
Q Consensus 472 ~ 472 (905)
+
T Consensus 444 ~ 444 (485)
T PRK13759 444 P 444 (485)
T ss_pred H
Confidence 5
No 4
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-51 Score=472.36 Aligned_cols=392 Identities=30% Similarity=0.429 Sum_probs=269.2
Q ss_pred CCCeEEEEEecCCCCCcccCCCCCCC-CCchHHHHHHhCccccccccC-CCChhhHHhhhcCCCCccCCCccccccCCCC
Q psy1088 58 GPPHIIFILADDLGWNDVGFHGLDQI-PTPNIDALAYSGIILKNYYTV-QLCTPSRSAIMTGKHPIHTGMQHNVLYGCER 135 (905)
Q Consensus 58 ~~PNIVlI~~D~lr~d~l~~~G~~~~-~TPnLd~LA~~Gv~f~~~ys~-~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~ 135 (905)
++||||+|++|++++.+++++|.... .|||+++||++||+|+|+|++ +.|+|||++|+||+||.++|+..+...++..
T Consensus 3 ~rPNil~i~~Ddlg~~~l~~~g~~~~~~tp~~d~LA~~Gv~f~n~y~~~~~c~PsRa~l~TGr~~~~~G~~~~~~~~g~~ 82 (475)
T COG3119 3 KRPNILIIMADDLGYGDLGAYGGPVVGPTPNIDRLAAEGVRFTNAYTTSPCCGPSRAALLTGRYPFRTGVGGNAEPPGYP 82 (475)
T ss_pred CCCcEEEEEeccCCCCCCCcCCCccccCCCCHHHHHhcCceeeccccCcCCCchhhhHHhhCCCccccccccccCCCCcc
Confidence 49999999999999999999998665 999999999999999999995 6666999999999999999999886545566
Q ss_pred CCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCC--CCccccccccccCCCCcCCchhHhhhhhccccccCCCcc
Q psy1088 136 GGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPT--FRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPA 213 (905)
Q Consensus 136 ~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~--~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~ 213 (905)
.+++...+||+++|+++||.|+++||||++.... .|. .+||+.++++..+..+...........- .+. ......
T Consensus 83 ~~l~~~~~Tla~~Lk~~GY~Ta~~GKwHl~~~~~--~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~ 158 (475)
T COG3119 83 GGLPDEVPTLAELLKEAGYYTALFGKWHLGEKDE--DPAGGDHGFDEFYGFLGGLTDEWYPELVDVPPP-GDV-PEFDQE 158 (475)
T ss_pred cccCcccchHHHHHHHcCChhhhcccccCCCCcc--CccccccccccccccccccccccccccccCCCC-cCc-cccccc
Confidence 7888899999999999999999999999997433 565 4899999987655443332211100000 000 000000
Q ss_pred cc--cCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhcc--------------------
Q psy1088 214 WD--LHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHR-------------------- 271 (905)
Q Consensus 214 ~~--~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~-------------------- 271 (905)
.. ...........+....+......++|+|++......|.+.. .++..+..|...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (475)
T COG3119 159 EGDPYVAGKDSADLADRFRRQAKEDAPDKPPFLLTAPFAPPAPDP-VDFEWPDEYRGFYDRAKRLDRPFFLYLAPPDPHL 237 (475)
T ss_pred cCchhhhcchhhhhhhhhhhhcccccccCCceEEecCCCCCCCCc-ccchhhHHHhhhcchhhcccCccccccCCCccCc
Confidence 00 00001112222333333333445677777777777775211 00111111111110
Q ss_pred ---------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCC
Q psy1088 272 ---------------HIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGV 336 (905)
Q Consensus 272 ---------------~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~ 336 (905)
......+..|+++|.++|.+||+||++|++.|++||||||||||||..++ ..+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~Y~a~v~~~D~~iGrll~~L~~~g~~DnTivvftsDhG~~~~------~~~~~~~~~ 311 (475)
T COG3119 238 SRRLPAADGLPAEEEEDGARLMTVYAACVRYLDDQIGRLLDALKELGLLDNTIVVFTSDHGAWLG------AHGTPFRGY 311 (475)
T ss_pred cccCccchhccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCccCcEEEEeCCCCCccc------CCCCccccc
Confidence 00123467899999999999999999999999999999999999998553 335678889
Q ss_pred CCcccCCCeeeeeEeeCCCCcC-CCeEEecceEehhHHHHHHHHhCCCCCCCcccccccccccc------cccccccccC
Q psy1088 337 KNTLWEGGVRGAGLIWSPLLES-RGIVAEQYVHVSDWLPTLLSAANKSDIPNYVNSTVENIIPR------YENSILRYEN 409 (905)
Q Consensus 337 k~~~~e~~~rVPliI~~Pg~~~-~g~v~~~~vs~vDI~PTLl~laGi~~~P~~~~g~g~sl~p~------~~~~~~~~~~ 409 (905)
|.++||+++||||||+||+.++ .+.+++.+++++||+||||++||++ .|. .-.|+++.|. ...+...+..
T Consensus 312 k~~~~egg~~VPliI~~Pg~i~~~g~~~~~~v~~~Di~PTll~~aG~~-~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~ 388 (475)
T COG3119 312 KGTLYEGGTRVPLIIRWPGGIKPGGRVVDALVSLIDLLPTLLDAAGVP-PPK--DLDGQSLPPKLQKPGLDGVPLLEWLA 388 (475)
T ss_pred ccccccCcccceEEEeccCccCCCCccccccchhhHHHHHHHHHcCCC-Ccc--cccccccCccccccCCCchhhhhhhc
Confidence 9999999999999999999754 4788899999999999999999999 666 4455777773 3334344443
Q ss_pred CcccccCCccccc-cccccCCccccCCceeecccCCcccCCCCccccccCCcccccCCCC
Q psy1088 410 GTHEYNSPRIENS-NTRYENGTHEYNPKYENRYENGTHEYNPKYENRYENGTHEYNGPKN 468 (905)
Q Consensus 410 ~~~~~~~~~~~~~-~~r~~~g~~~~~~kyi~~~~~~~~~~~~~eLYDl~~DP~E~~NLa~ 468 (905)
+............ ...-...++..+|||+..... +...|||+.+||.|+.||+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~ir~~~~k~~~~~~~-----~~~~~~~~~~dp~el~~l~~ 443 (475)
T COG3119 389 GGKAAVREEYGYFGELFGLRAIRRDDWKYIVFLPA-----DPTLLYDVRNDPWELTNLAD 443 (475)
T ss_pred CccccccccccccccCCceEEEEcCCccccccccc-----CccccccccCCCceEEecCC
Confidence 3211111111111 111111245559999833222 22338999999999999998
No 5
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=100.00 E-value=1.9e-41 Score=373.32 Aligned_cols=299 Identities=26% Similarity=0.421 Sum_probs=225.6
Q ss_pred CeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCCCCCC
Q psy1088 60 PHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCERGGL 138 (905)
Q Consensus 60 PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~~~l 138 (905)
||||+|++|++|.++++++|.....||+|++|+++|+.|+++|+ ++.|+||++++|||++|..+|+..+..... ...
T Consensus 1 pNVv~i~~Es~~~~~~~~~~~~~~~tP~l~~l~~~g~~f~~~~s~~~~T~~s~~~~ltG~~~~~~~~~~~~~~~~--~~~ 78 (308)
T PF00884_consen 1 PNVVLIVLESLRADDLSCYGYPIPTTPNLDRLAENGLRFSNAYSSGPWTSPSRFSMLTGLYPHNSGVYSNGPYQQ--FNL 78 (308)
T ss_dssp -EEEEEEETT--TTSSGGGTSSSSSSHHHHHHHHTSEEESSEE-SSSSHHHHHHHHHHSS-HHHHT-SSSCSTTT--CSS
T ss_pred CEEEEEEcccCCCCCCCCCCCCcccCHHHHHhhhccEEEEEEEeccCccccchhhhccccccccccccccccccc--ccc
Confidence 89999999999999999999877789999999999999999998 579999999999999999998765532211 445
Q ss_pred CCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccccCC
Q psy1088 139 PLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWDLHG 218 (905)
Q Consensus 139 ~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~~~~ 218 (905)
.....+|++.|+++||+|.++++++.++.........+||+.+++.......+....... . .. ........
T Consensus 79 ~~~~~~l~~~l~~~GY~t~~~~~~~~~~~~~~~~~~~~gfd~~~~~~~~~~~~~~~~~~~-----~-~~---~~~~~~~~ 149 (308)
T PF00884_consen 79 PSKFPSLPDLLKKAGYRTSFFGPWDASFYNNQAFYPSHGFDYFLGQPGLSDRIDNPRISG-----P-FN---DVNRSNEW 149 (308)
T ss_dssp TTTS--HHHHHHHTT-EEEEEEES-STGGGHHCHCHHTT-SEEEEESSSGGGTTSSTTEE-----E-CT---TTTESTTT
T ss_pred cccccccHHHHhhcccccceeeccccCccccccccccCCcceEEeeeccccccccccccc-----c-cc---cccccccc
Confidence 667899999999999999999999988765554445789998776432222221111000 0 00 00001223
Q ss_pred CcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccch-------hhHHHHHHHHHHHHHH
Q psy1088 219 KYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIED-------FKRSKFAAILHKLDES 291 (905)
Q Consensus 219 ~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~-------~~~~~Y~~~v~~lD~~ 291 (905)
.+.++.+++.++++|.... ++|||+++++..+|. |+..++.+...+..... ..++.|.++|.++|.+
T Consensus 150 ~~~d~~~~~~~~~~l~~~~-~~p~f~~~~~~~~H~-----P~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~ 223 (308)
T PF00884_consen 150 GYSDDALFDYAIDFLLNED-DKPFFLFIHTMGPHG-----PYPYPPDYAEKFPKFSPDIPDKDREMRNNYLNAIAYVDDQ 223 (308)
T ss_dssp CEHHHHHHHHHHHHHHCTT-TSSEEEEEEE-TTSS-----STCTTCCHHHGGTTCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhcc-cccceeEEeeccccc-----cccccccccccccccccccccchhhhHHHHHHHHHHHHHH
Confidence 4678889999999985444 899999999999999 98888888766554332 6778999999999999
Q ss_pred HHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCC-cccCCCeeeeeEeeCCCCcCCCeEEecceEeh
Q psy1088 292 VGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKN-TLWEGGVRGAGLIWSPLLESRGIVAEQYVHVS 370 (905)
Q Consensus 292 VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~-~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~v 370 (905)
||+|++.|++.|+++||+||||||||..+++ +...+.+.+. .++++.+||||+|++|+..+. ++.+.+++++
T Consensus 224 l~~~~~~l~~~~~~d~TiiiitsDHG~~~~e------~~~~~~~~~~~~~~~~~~~vP~~i~~p~~~~~-~~~~~~~s~~ 296 (308)
T PF00884_consen 224 LGRFIEYLKEQGLYDNTIIIITSDHGESFGE------NGHYFHGGKGNDLYEESYHVPLIIYWPGGEPQ-QTIDRLVSHI 296 (308)
T ss_dssp HHHHHHHHHHTTCGGGEEEEEEESSSSSTGG------HHTTSSSSTTHSSSHHHHBEEEEEECTTSSSC-EEECS-EEGG
T ss_pred hhhhhhhhhhcCCcccceeEEecCcCccccc------ccccccccccccchhhccccceEEEcCCCCCC-cEECCeEEhH
Confidence 9999999999999999999999999998843 1122345666 889999999999999999764 6889999999
Q ss_pred hHHHHHHHHhCC
Q psy1088 371 DWLPTLLSAANK 382 (905)
Q Consensus 371 DI~PTLl~laGi 382 (905)
||+||||++|||
T Consensus 297 Di~pTll~l~Gi 308 (308)
T PF00884_consen 297 DIAPTLLDLLGI 308 (308)
T ss_dssp GHHHHHHHHTT-
T ss_pred HHHHHHHHHhCC
Confidence 999999999996
No 6
>KOG3731|consensus
Probab=100.00 E-value=7.4e-39 Score=342.49 Aligned_cols=317 Identities=23% Similarity=0.356 Sum_probs=243.7
Q ss_pred cCCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCcccc--cc
Q psy1088 55 ASSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNV--LY 131 (905)
Q Consensus 55 ~~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~--~~ 131 (905)
+...+||||||+.||++ ..+|+....+|.++-+++.|+.|.++|+ ++.|.|||++++||+|++.|++..+. ..
T Consensus 30 a~~~~PNvIlvLTDDqD----~eLGsm~vm~kt~~~~~dgg~~Fi~aYvttslCcPSRnSiLTGky~hnhhv~tnn~ncs 105 (541)
T KOG3731|consen 30 AGRLPPNVILVLTDDQD----VELGSMAVMFKTLTIMLDGGAHFISAYVTTSLCCPSRNSILTGKYVHNHHVYTNNENCS 105 (541)
T ss_pred cCCCCCCEEEEEccCcc----hhcccccccchHHHHHhcCCceEEecccCccccccccchhhhccccccccccccccccC
Confidence 34566999999999996 3467778889999999999999999999 79999999999999999999998772 11
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCC
Q psy1088 132 GCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLE 211 (905)
Q Consensus 132 ~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~ 211 (905)
.......-...+..++...++||+|+++||.-.-+ ..++.|. |+.++.+. .....||+.+.... |..-..
T Consensus 106 s~~Wq~~he~~t~~~~l~~~~GYrT~~~GKylney-~gsyiPp--gW~ew~~l-~knskfyNytv~~N---g~~~kh--- 175 (541)
T KOG3731|consen 106 SPSWQADHEKRTFAVYLAIDQGYRTAFFGKYLNEY-NGSYIPP--GWSEWAGL-IKNSKFYNYTVCKN---GIKEKH--- 175 (541)
T ss_pred chhHhhhhccCchhhhhhhhhceeeecchhhcccc-CcccCCC--Cchhhhcc-ccccchhcchhhcC---cccccc---
Confidence 11222233345556666666999999999975444 3355554 77776653 34456676654421 111000
Q ss_pred cccccCCCcccHHHHHHHHHHHHcC---CCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccc--------------
Q psy1088 212 PAWDLHGKYSTDVFTAEAVDIIHNH---STDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIE-------------- 274 (905)
Q Consensus 212 ~~~~~~~~~~d~~~~d~a~~~I~~~---~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~-------------- 274 (905)
..+..-.|.+|+++...+.|++.. .+.+||||.+++.+||. |+..++.|...|....
T Consensus 176 -g~~y~kdyltDlitn~s~~ff~~s~~~~~~~Pf~l~is~~aPHg-----ped~apQf~~~F~n~~~h~t~s~n~aPnpd 249 (541)
T KOG3731|consen 176 -GSDYSKDYLTDLITNDSLLFFDGSKKRHSQEPFFLAISFPAPHG-----PEDSAPQFSHLFNNVQFHRTPSYNLAPNPD 249 (541)
T ss_pred -ccccchhhhchhhhhhhHHHHhhccccccCCCeEEEeccCCCCC-----CCCccHHHHHhccccccccCcccccCCCCc
Confidence 111223478899999999999843 34799999999999999 8888887776654211
Q ss_pred -------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccC
Q psy1088 275 -------------------DFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRG 335 (905)
Q Consensus 275 -------------------~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg 335 (905)
+...+.-++.+..+|+.|.+|.+.|.+.|.+|||.||.|||||-+++.++ +.-
T Consensus 250 k~W~~~~t~pm~~ih~~ft~~l~rkrlQtlqSvd~sve~l~n~l~elgeLdnTyivytsDhGyhlGqfg--------l~k 321 (541)
T KOG3731|consen 250 KHWILRTTGPMSNIHIPFTNILPRKRLQTLQSVDDSVERLYNLLGELGELDNTYIVYTSDHGYHLGQFG--------LWK 321 (541)
T ss_pred cceeeeeccCCCccccccccchHHHHHHHHHhHHHHHHHHHHHHHHhhcccceEEEEEcCCcccccccc--------ccc
Confidence 12346678899999999999999999999999999999999999997766 334
Q ss_pred CCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHHhCCCCCCCcccccccccccccccc
Q psy1088 336 VKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSAANKSDIPNYVNSTVENIIPRYENS 403 (905)
Q Consensus 336 ~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~laGi~~~P~~~~g~g~sl~p~~~~~ 403 (905)
+|..+||-.+||||+|++||+.+ +.++.++|..+|++||||++||++ .|..| +|+||+++++.+
T Consensus 322 gks~pyEfdiRVPf~iRgP~v~~-~~~~~~Iv~niDlaPTilDiAGlp-~p~~m--dg~sll~ll~~~ 385 (541)
T KOG3731|consen 322 GKSMPYEFDIRVPFLIRGPGVAP-NKTVNEIVLNIDLAPTILDIAGLP-KPACM--DGRSLLPLLGKS 385 (541)
T ss_pred CCCCceeEeeeeeEEeeCCCCCc-cccchhhheeccccchhhhhcCCC-Ccccc--cccchhhhhccc
Confidence 67788999999999999999965 788899999999999999999999 88655 458999987554
No 7
>PRK12363 phosphoglycerol transferase I; Provisional
Probab=100.00 E-value=3.4e-33 Score=327.81 Aligned_cols=300 Identities=19% Similarity=0.211 Sum_probs=212.4
Q ss_pred CCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCccccccccCCCChhhHHhhh---cCCCCccC--CCcccccc
Q psy1088 57 SGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYTVQLCTPSRSAIM---TGKHPIHT--GMQHNVLY 131 (905)
Q Consensus 57 ~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys~~~~tPSrasll---TG~yP~~~--Gi~~~~~~ 131 (905)
+++||||+|++||++...++..+. ...||||++|+++|+.|+|+|+++.|..+.++|+ +|. |... |. .+..
T Consensus 154 aKk~NVVvI~LESle~~~id~~~~-~~lTPnLd~Lakegl~FtNfy~~~G~g~Ti~Gl~as~~Gl-Pl~~~~g~-~Nt~- 229 (703)
T PRK12363 154 QKRKNIVWIYGESLERTYFDEDVF-PGLMPNLTRLATEAVDVRNLASTEGSGWTIAGMVASMCGV-PLTTAQGD-ENSM- 229 (703)
T ss_pred cCCCCEEEEEEccCchhhhcCCCC-CCcChhHHHHHhCCeeECCeEeCCCCCcchhhHhHHHhCC-CCcCCCCc-cccc-
Confidence 468999999999999887877665 4679999999999999999998665555555444 443 2211 10 0110
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCC
Q psy1088 132 GCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLE 211 (905)
Q Consensus 132 ~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~ 211 (905)
. .........++|+++|+++||+|++++..+..+++...+...+|||.+++. .+|.... ...
T Consensus 230 ~-~~~~f~p~~~~La~ILkq~GY~Taf~hG~~~sF~nrd~fyk~hGFD~f~d~-----~~f~~~~------------~~~ 291 (703)
T PRK12363 230 D-RMGHFLPEARCLGDYLKDQGYTNHYVGGADASFAGKGKFLSSHGFDEVHDV-----NYFLHDK------------GVA 291 (703)
T ss_pred c-cccccCcccchHHHHHHhCCCcEEEEeCCCcCcCchhhHHHhCCCCEEeec-----hhhcccc------------ccC
Confidence 0 011233467899999999999999999988888887778888999987753 1221000 000
Q ss_pred cccccCCCcccHHHHHHHHHHHHcC-CCCCCeEEEeeccCCCCCCCCCCCC-CChhhhhhccccchhhHHHHHHHHHHHH
Q psy1088 212 PAWDLHGKYSTDVFTAEAVDIIHNH-STDEPLFLYLAHAATHSANPYEPLQ-APDHYLNIHRHIEDFKRSKFAAILHKLD 289 (905)
Q Consensus 212 ~~~~~~~~~~d~~~~d~a~~~I~~~-~~~kPfFl~l~~~~~H~~~~~~P~~-~P~~~~~~~~~~~~~~~~~Y~~~v~~lD 289 (905)
........+.|+.+++.++++|++. +.++|||+++.+.++|. |+. .|......... .......|.++++++|
T Consensus 292 ~~~~~~WGl~Dd~lfd~A~~~Le~Ls~~~qPFfl~llTvsnH~-----Py~~lp~~~~~~~~~-~~~gd~~Yl~tI~ysD 365 (703)
T PRK12363 292 PKHFSAWGVHDDVLLDDAYDEFETLSRAGQPFMLTTLTMDTHH-----PAGHLPSACKGQRYD-SPLGDIGMLHAIKCSD 365 (703)
T ss_pred cccCCCCCcccHHHHHHHHHHHHhhhccCCCEEEEeeCCCCCC-----CcccCchhccccccc-cccccHHHHHHHHHHH
Confidence 0111122356889999999999863 45799999999999999 652 22221111110 0111267999999999
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEe
Q psy1088 290 ESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHV 369 (905)
Q Consensus 290 ~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~ 369 (905)
++||+|++.|+++|+++||+|||+||||..... ...++ ....|+|++|++|+..+++.+.+..+++
T Consensus 366 ~aIG~FId~LKksglydNTIIV~~GDH~~~~~~------~~~~L--------~~~kRvP~~I~ip~gik~g~i~~~~gS~ 431 (703)
T PRK12363 366 RLIGQLVDRIRNSRYGKNTIIVIASDHLAMPND------LSDVL--------TKQKRENLLLFLGKDIAPQQVVTRAGTT 431 (703)
T ss_pred HHHHHHHHHHHhcCCcCCeEEEEEcCCCccccc------ccccC--------CCCCeEEEEEEECCcCCCCcEECCeeee
Confidence 999999999999999999999999999975421 11112 2235899999886555667777999999
Q ss_pred hhHHHHHHHHhCCCCCCCcccccccccccccc
Q psy1088 370 SDWLPTLLSAANKSDIPNYVNSTVENIIPRYE 401 (905)
Q Consensus 370 vDI~PTLl~laGi~~~P~~~~g~g~sl~p~~~ 401 (905)
+||+||||+++|++ .+ ..+.|++|+....
T Consensus 432 iDI~PTLL~LLGi~-~~--~~~fG~dLLS~~~ 460 (703)
T PRK12363 432 LDSGATLLQLLEPG-MR--TLGFGRSLLADDA 460 (703)
T ss_pred eHHHHHHHHHhCCC-CC--CCcCCCcCCCCCC
Confidence 99999999999987 44 4566788887543
No 8
>PRK03776 phosphoglycerol transferase I; Provisional
Probab=100.00 E-value=1e-32 Score=323.41 Aligned_cols=300 Identities=15% Similarity=0.110 Sum_probs=215.0
Q ss_pred CCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc---CCCChhhHHhhhcCCCCccCCCccccccC
Q psy1088 56 SSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT---VQLCTPSRSAIMTGKHPIHTGMQHNVLYG 132 (905)
Q Consensus 56 ~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys---~~~~tPSrasllTG~yP~~~Gi~~~~~~~ 132 (905)
+.++||||+|++||+....++..+. ...||+|++|+++|+.|+|++. +..|..+..++++|. |....+..+..
T Consensus 158 p~kK~NVViI~LESle~ty~d~~~~-~~ltP~LdkLakegl~FsN~~q~~gt~~Ti~GmfAs~cGl-Pl~~pf~~n~s-- 233 (762)
T PRK03776 158 PNPKLNLVYIYGESLERTYFDNEAF-PGLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGI-PLFAPFEGNAS-- 233 (762)
T ss_pred CCCCCcEEEEEEecCChhhhccCCC-CCCChhHHHHHhcCeeecCceecCCCCccHHHHHHHHcCC-CCCCCCCCccc--
Confidence 4689999999999999888876554 4689999999999999999863 355778999999998 43221111110
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCc
Q psy1088 133 CERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEP 212 (905)
Q Consensus 133 ~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~ 212 (905)
......-....||+++|+++||+|.++++|+.++++....+..+|||.+++...-...+ . .+
T Consensus 234 ~~~~~f~P~~~cLgdILK~~GY~T~Fi~G~d~~F~n~~~f~~~hGFD~~yg~~d~~~~~-~-----------------~~ 295 (762)
T PRK03776 234 ASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVV-A-----------------DP 295 (762)
T ss_pred ccccccCCccccHHHHHHhCCCceEEEeCCCcCcCchhhhHHhCCCcEEecchhccccc-c-----------------cc
Confidence 01111122557999999999999999999999998888888999999987642100000 0 00
Q ss_pred ccccCCCcccHHHHHHHHHHHHc-CCCCCCeEEEeeccCCCCCCCCCCCCCChhh-hh-hccccchhhHHHHHHHHHHHH
Q psy1088 213 AWDLHGKYSTDVFTAEAVDIIHN-HSTDEPLFLYLAHAATHSANPYEPLQAPDHY-LN-IHRHIEDFKRSKFAAILHKLD 289 (905)
Q Consensus 213 ~~~~~~~~~d~~~~d~a~~~I~~-~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~-~~-~~~~~~~~~~~~Y~~~v~~lD 289 (905)
.+.....+.|+.+++.|++.+++ .+.++|||+++.+.++|. |+..+.+. .. .+.. +.....|.++|+++|
T Consensus 296 ~~~n~WG~~Dd~Lfd~A~e~l~eLsk~~kPFfl~llTlstH~-----P~g~~~~~c~~~~y~~--~g~~~~~~~~v~~~D 368 (762)
T PRK03776 296 HYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHH-----PDGFISRTCNRKSYDF--DGKPNQSFSAVSCSQ 368 (762)
T ss_pred cccCCcccCcHHHHHHHHHHHHHhhcCCCCEEEEecCCCCcC-----CCccCchhhccccccc--CCcchHHHHHHHHHH
Confidence 01112235788899999987764 345799999999999999 76433321 11 1211 112255789999999
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEe
Q psy1088 290 ESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHV 369 (905)
Q Consensus 290 ~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~ 369 (905)
++||+|+++|++.|++|||+|||+||||.+.+.+ ++.. ......+++++|.+|+. .++++++.+++
T Consensus 369 ~~iG~fi~~Lk~~g~~dNTiIV~~sDHG~m~g~~-------~~~l-----~~~kr~~i~lII~~p~~--~g~~~~~~vs~ 434 (762)
T PRK03776 369 ENIAALINKIKASPWFKNTVIVVSSDHLAMNNTA-------WKYL-----NKQDRNNLFFVIRGDKP--QQETLAVKRNT 434 (762)
T ss_pred HHHHHHHHHHHhCCCccCeEEEEEccCCcccccc-------chhh-----ccCCceeEEEEEECCCc--CCceECCceee
Confidence 9999999999999999999999999999876321 1100 01123568899999984 46778999999
Q ss_pred hhHHHHHHHHhCCCCCCCccc---ccccccccc
Q psy1088 370 SDWLPTLLSAANKSDIPNYVN---STVENIIPR 399 (905)
Q Consensus 370 vDI~PTLl~laGi~~~P~~~~---g~g~sl~p~ 399 (905)
+||+||||++||++ .+..++ -+|+||+|.
T Consensus 435 IDI~PTILdlaGi~-~~lglG~nllsG~SL~pl 466 (762)
T PRK03776 435 MDNGATVLDILGGD-NYIGLGRSSLSGQSLSEI 466 (762)
T ss_pred hhHHHHHHHHhCCC-ccccCCcccCCCCCHHHH
Confidence 99999999999997 422221 245677665
No 9
>PRK09598 lipid A phosphoethanolamine transferase; Reviewed
Probab=99.97 E-value=9.1e-31 Score=304.20 Aligned_cols=268 Identities=14% Similarity=0.214 Sum_probs=198.8
Q ss_pred CCCCeEEEEEecCCCCCcccCCCCCCCCCchHHH-HHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCC
Q psy1088 57 SGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDA-LAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCE 134 (905)
Q Consensus 57 ~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~-LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~ 134 (905)
.+++|||+|+.|++|+++++.+|+++.+||+|++ ++++|+.|.++++ ++.|++|+.+|+||.++..+.
T Consensus 221 ~~~~~vVlViGES~R~d~~slyGY~r~TTP~L~~~la~~~~~f~n~~S~gt~T~~Slp~mls~~~~~~~~---------- 290 (522)
T PRK09598 221 HSKSVVVLVIGESARKHNYALYGYEKPTNPRLSKRLATHELTLFNATSCATYTTASLECILDSSFKNTSN---------- 290 (522)
T ss_pred CCCCEEEEEEECCccHhhcccCCCCCCCChhhhhhcccCceEEcceeeCCCCHHHHHHHHccCCCccccc----------
Confidence 4789999999999999999999999999999977 6678999999998 689999999999998875421
Q ss_pred CCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCccc
Q psy1088 135 RGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAW 214 (905)
Q Consensus 135 ~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~ 214 (905)
...+|+++|+++||+|.++++++ |.. ..+++.+.+ ..++.. . ..
T Consensus 291 ------~~~nl~~ilk~aGy~T~W~snq~-g~~-------~~~~~~~~~----~~~~~~---------------~---~~ 334 (522)
T PRK09598 291 ------AYENLPTYLTRAGIKVFWRSAND-GEP-------NVKVTSYLK----NYELIQ---------------K---CP 334 (522)
T ss_pred ------ccCCHHHHHHHCCCeEEEEECCC-CCC-------Cccceeecc----chhccc---------------c---CC
Confidence 22579999999999999999875 210 012222111 000000 0 00
Q ss_pred ccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCC-C--CCChhhhhhcccc----------chhhHHHH
Q psy1088 215 DLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEP-L--QAPDHYLNIHRHI----------EDFKRSKF 281 (905)
Q Consensus 215 ~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P-~--~~P~~~~~~~~~~----------~~~~~~~Y 281 (905)
.. ....|+.+...+.++|++.. ++|+|+++|++++|. | | ..|++| +.|.+. .+...+.|
T Consensus 335 ~~-~~~~De~LL~~l~~~l~~~~-~~p~fivlH~~GSH~-----P~Y~~RyP~~f-~~F~p~~~~~~l~~~~~~~~~n~Y 406 (522)
T PRK09598 335 NC-EAPYDESLLYNLPELIKASS-NENVLLILHLAGSHG-----PNYDNKYPLNF-RVFKPVCSSVELSSCSKESLINAY 406 (522)
T ss_pred CC-CCCCHHHHHHHHHHHHHhcC-CCCeEEEEeCcCCCC-----CcccccCChhh-cccCCCCcchhhhhccHHHHHHHH
Confidence 00 11246667778888887643 479999999999999 5 2 235555 444332 12345789
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccC-CCCcccCCCeeeeeEeeCCCCcCCC
Q psy1088 282 AAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRG-VKNTLWEGGVRGAGLIWSPLLESRG 360 (905)
Q Consensus 282 ~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg-~k~~~~e~~~rVPliI~~Pg~~~~g 360 (905)
+++|.++|..||++++.|++.+. ||+||++||||+.+++++.. + .| .+...+++.+|||++||+|+..+.+
T Consensus 407 dnsI~ytD~~l~~ii~~Lk~~~~--~t~iIy~SDHGe~lge~g~~-~-----hg~p~~~~~~~~~~VP~ii~~s~~~~~~ 478 (522)
T PRK09598 407 DNTIFYNDYLLDKIISMLKNLKQ--PALMIYLSDHGESLGEGAFY-L-----HGIPKSIAPKEQYEIPFIVWASDSFKKQ 478 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CeEEEEEccCccccccCCcc-c-----CCCCcCCCccccccccEEEEEChhhhhh
Confidence 99999999999999999999876 99999999999998654321 1 11 1235678999999999998754433
Q ss_pred ---eEEecceEehhHHHHHHHHhCCCCCCC
Q psy1088 361 ---IVAEQYVHVSDWLPTLLSAANKSDIPN 387 (905)
Q Consensus 361 ---~v~~~~vs~vDI~PTLl~laGi~~~P~ 387 (905)
...+.++|+.||+||||+++|++ .|.
T Consensus 479 ~~~~~~~~~~S~ddif~TlL~l~gv~-t~~ 507 (522)
T PRK09598 479 HSIIQTQTPINQNVIFHSVLGVFDFK-NPS 507 (522)
T ss_pred chhhhcCCCchHHHHHHHHHHHcCCC-Cch
Confidence 24578999999999999999998 553
No 10
>PRK10649 hypothetical protein; Provisional
Probab=99.97 E-value=1.1e-29 Score=299.72 Aligned_cols=285 Identities=13% Similarity=0.168 Sum_probs=197.8
Q ss_pred CCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHH---hCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCC
Q psy1088 58 GPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAY---SGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGC 133 (905)
Q Consensus 58 ~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~---~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~ 133 (905)
+++|||||+.|++|+++++++|+++.+||+|++|++ +++.|+++|+ .+.|.+|+.+++|..... +
T Consensus 235 ~p~niVlVIGES~r~d~~slyGY~r~TTP~Ld~l~~~~~~~~~F~n~~S~~~~T~~Sl~~~LS~~~~~------~----- 303 (577)
T PRK10649 235 APRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFADEK------N----- 303 (577)
T ss_pred CCCeEEEEEEeccCHhhccccCCCCCCChhHHhhhccCCCeEEeCceecCCcCHHHHHHHHccCCccc------c-----
Confidence 455999999999999999999999999999999998 8899999999 689999999999842111 0
Q ss_pred CCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcc
Q psy1088 134 ERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPA 213 (905)
Q Consensus 134 ~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~ 213 (905)
.......++|+++|+++||+|.++++++.-. ... ..+..+... ....+|. ....
T Consensus 304 --~~~~~~~~~l~~llk~aGY~T~wisNq~~~~-~~~-----~~~~~~~~~--~d~~~f~--------------~~~~-- 357 (577)
T PRK10649 304 --PDLYLTQPSLMNMMKQAGYKTFWITNQQTMT-ARN-----TMLTVFSRQ--TDKQYYM--------------NQQR-- 357 (577)
T ss_pred --hhhhccCCCHHHHHHHCCCeEEEEeCCcccc-ccc-----hhhhHhhhh--ccchhhc--------------cccc--
Confidence 0111246789999999999999999875311 000 001110000 0000110 0000
Q ss_pred cccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCC--CChhhhhhccccc-----------hhhHHH
Q psy1088 214 WDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQ--APDHYLNIHRHIE-----------DFKRSK 280 (905)
Q Consensus 214 ~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~--~P~~~~~~~~~~~-----------~~~~~~ 280 (905)
......+ |+.+.....++|+. ..+|+|+++|++++|. ||. .|+++ ++|.... ....+.
T Consensus 358 ~~~~~~~-D~~LL~~l~~~L~~--~~~~~fivlHl~GsH~-----~Y~~RyP~~~-~~F~~~~~~~~~~~~~~~~~~~~~ 428 (577)
T PRK10649 358 TQNAREY-DTNVLKPFSEVLAD--PAPKKFIIVHLLGTHI-----KYKYRYPENQ-GKFDDRTGHVPPGLNADELESYND 428 (577)
T ss_pred cCCCCCc-HHHHHHHHHHHHhc--cCCCcEEEEEecCCCc-----chhhhCCHHH-hcCCCCCCcccccccchHHHHHHh
Confidence 0011223 55555566677753 2578899999999999 763 46665 4443211 122468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCC-CCcccCCCeeeeeEeeCCCC-cC
Q psy1088 281 FAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGV-KNTLWEGGVRGAGLIWSPLL-ES 358 (905)
Q Consensus 281 Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~-k~~~~e~~~rVPliI~~Pg~-~~ 358 (905)
|.++|.++|..||+|++.|++. .+||+|||+||||+...+. +.+. +.|+ ++.+|++++|||||||++.. .+
T Consensus 429 Y~nsI~y~D~~l~~ii~~Lk~~--~~nt~iiy~SDHGe~~~~~----~~~~-~lG~~~~~~~~~~~~VP~ii~~s~~~~~ 501 (577)
T PRK10649 429 YDNANLYNDHVVASLIKDFKAT--DPNGFLVYFSDHGEEVYDT----PPHK-TQGRNEDNPTRHMYTIPFLLWTSEKWQA 501 (577)
T ss_pred hhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEECCCCcccccC----Cccc-ccCCCCCCCCcccceecEEEEECHHHHh
Confidence 9999999999999999999987 4999999999999986321 1111 3343 36788999999999998543 21
Q ss_pred --C---CeEEecceEehhHHHHHHHHhCCCCCCCccccccccccc
Q psy1088 359 --R---GIVAEQYVHVSDWLPTLLSAANKSDIPNYVNSTVENIIP 398 (905)
Q Consensus 359 --~---g~v~~~~vs~vDI~PTLl~laGi~~~P~~~~g~g~sl~p 398 (905)
+ +...++++++.||+|||++++|++ .+....+ +|++.
T Consensus 502 ~~~~~~~~~~~~~~s~~Dl~~Tll~laGi~-~~~~~~~--~sl~~ 543 (577)
T PRK10649 502 AHPRDFSQDVDRKYSLAELIHTWSDLAGLS-YDGYDPT--RSLVN 543 (577)
T ss_pred hCchhhhhhhcCCeeHHhHHHHHHHHcCCC-CCcCCcc--cCccc
Confidence 1 234688999999999999999998 6665544 55554
No 11
>COG3083 Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]
Probab=99.97 E-value=3.6e-29 Score=272.74 Aligned_cols=292 Identities=17% Similarity=0.190 Sum_probs=201.3
Q ss_pred cCCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCccccccccCCCCh-hhHHhhhcCCCCccCCCccccccCC
Q psy1088 55 ASSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYTVQLCT-PSRSAIMTGKHPIHTGMQHNVLYGC 133 (905)
Q Consensus 55 ~~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys~~~~t-PSrasllTG~yP~~~Gi~~~~~~~~ 133 (905)
+.+.+||||+|++|++|.|.+. +..||+|..+|++.+.|+|||++..++ .+..+|+- |+........
T Consensus 255 ~~a~~~NillI~vdglR~d~l~-----~~~MP~la~Fa~q~i~FtnHySsGN~t~~GlfGLFY-------GL~~~Y~d~v 322 (600)
T COG3083 255 DPAHGPNILLITVDGLRYDALD-----EKQMPNLADFANQNIRFTNHYSSGNSTQAGLFGLFY-------GLSATYWDSV 322 (600)
T ss_pred CCCCCCCEEEEEeccccccccC-----hhhChhHHHHHhhhcccccccCCCCccccchheeec-------cCChhHHHHH
Confidence 3567899999999999999986 678999999999999999999965554 44444444 4433322111
Q ss_pred CCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcc
Q psy1088 134 ERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPA 213 (905)
Q Consensus 134 ~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~ 213 (905)
... ...+.|.+.|++.||+-+.++...+.. . =|+... ..+....
T Consensus 323 ls~---~t~p~Lie~L~qq~YQfglfss~~F~s-----p----lfrqal------------------------f~~l~~~ 366 (600)
T COG3083 323 LSA---RTPPALIEALRQQNYQFGLFSSDGFKS-----P----LFRQAL------------------------FSDLSLP 366 (600)
T ss_pred Hhc---CCchHHHHHHHhcCceEEeeccCCCCC-----c----hHHHHH------------------------hhhcCcc
Confidence 111 245789999999999999887532211 0 111110 0000000
Q ss_pred cccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHH
Q psy1088 214 WDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVG 293 (905)
Q Consensus 214 ~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG 293 (905)
......-.++..++-...+++.++.++|||.|+.+..+|..+....-+++ ...+..+.|..++.++|.+||
T Consensus 367 ~~~t~~~~~~~~t~~~~wf~~~~~~d~PwFs~L~l~~~~~~~~~~s~q~~---------~~~~~~~~Y~~a~~~vD~~I~ 437 (600)
T COG3083 367 ALVTQSSDDERATQWLLWFGRYRDEDNPWFSYLSLNSSHANDDPSSNQAK---------ARPPFKNRYQNALREVDSQIG 437 (600)
T ss_pred ccccCCchHHHHHHHHHHHHHhhccCCCceEEEEcccccccccccccccc---------ccchHHHHHHHHHHHHHHHHH
Confidence 00000003445566666666777779999999999999983221111111 112356889999999999999
Q ss_pred HHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHH
Q psy1088 294 KVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWL 373 (905)
Q Consensus 294 ~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~ 373 (905)
++++.|+++|.+|||+||+|||||..+.+...+ ..|+.....-..++||++|+|||.. ++++..+.+|+||+
T Consensus 438 ~vLe~L~~~~~L~NTvVIITs~HG~eFne~~~~------ywG~~t~ysr~qlqVPlvihwpg~~--~~~v~~lTsH~Dl~ 509 (600)
T COG3083 438 RVLEQLRNSGLLDNTVVIITADHGEEFNEEEQN------YWGHGTNYSRYQLQVPLVIHWPGTP--AGRVNHLTSHLDLM 509 (600)
T ss_pred HHHHHHhhcccccceEEEEECCCCcccCccccc------cccCCCccccceecccEEEEeCCCc--chhhcCccchhhhH
Confidence 999999999999999999999999999664422 1233333334468999999999984 34568899999999
Q ss_pred HHHHH-HhCCCCCCCcccccccccccccccccccccCCcc
Q psy1088 374 PTLLS-AANKSDIPNYVNSTVENIIPRYENSILRYENGTH 412 (905)
Q Consensus 374 PTLl~-laGi~~~P~~~~g~g~sl~p~~~~~~~~~~~~~~ 412 (905)
|||+. ++|+. .|......|++|+....+..+......+
T Consensus 510 ~tLMq~ll~V~-np~~dYSqG~dLf~~~~~r~Wv~a~d~~ 548 (600)
T COG3083 510 TTLMQRLLGVS-NPPSDYSQGQDLFNESRRRDWVLAADYR 548 (600)
T ss_pred HHHHHHHhcCC-CChhhhhcccchhccCcccceEEecccc
Confidence 99996 99999 7777777888888876544444444433
No 12
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=99.95 E-value=6.5e-27 Score=272.58 Aligned_cols=273 Identities=14% Similarity=0.203 Sum_probs=190.8
Q ss_pred CCCe-EEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCc-ccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCC
Q psy1088 58 GPPH-IIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGI-ILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCE 134 (905)
Q Consensus 58 ~~PN-IVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv-~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~ 134 (905)
.+|| ||+|+.|+.|+++++.+|+++.+||.|.+ +++ .|+++++ ++.|.+|..+|+++..+..+..
T Consensus 232 ~~~~~vVlViGESaR~~~~slyGY~r~TtP~L~~---~~~~~F~~~~S~gt~T~~Svp~mfS~~~~~~y~~--------- 299 (545)
T PRK11598 232 KRKNLTILVVGETSRAENFSLGGYPRETNPRLAK---DNVIYFPHTTSCGTATAVSVPCMFSNMPRKHYDE--------- 299 (545)
T ss_pred CCCcEEEEEehhhHHHhhcCCCCCCCCCCccccc---cCceeecccccCccchHHHHHHHhcccccccccc---------
Confidence 3566 78899999999999999999999999764 555 6999999 5778899999999987643221
Q ss_pred CCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCccc
Q psy1088 135 RGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAW 214 (905)
Q Consensus 135 ~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~ 214 (905)
.+.....+|.++|+++||+|.++... .|+..... .... .....|+. ...
T Consensus 300 --~~~~~~~~l~d~l~~aG~~t~W~~Nq-------------~g~~g~~~-------r~~~--~~~~~~~~-------~~~ 348 (545)
T PRK11598 300 --ELAHHQEGLLDIIQRAGINVLWNDND-------------GGCKGACD-------RVPH--QDVTALNL-------PGQ 348 (545)
T ss_pred --hhhhhcccHHHHHHHcCCeEEeecCC-------------CCCcchhc-------ccch--hhhhhhcc-------ccc
Confidence 11223468999999999999886531 12211000 0000 00001110 011
Q ss_pred ccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCC---CCChhhhhhccc----------cchhhHHHH
Q psy1088 215 DLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPL---QAPDHYLNIHRH----------IEDFKRSKF 281 (905)
Q Consensus 215 ~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~---~~P~~~~~~~~~----------~~~~~~~~Y 281 (905)
...+...|+.+.+...++|++. +++.|+++|++++|. |+ ..|+++ ..|.. ..+...+.|
T Consensus 349 ~~~~~~~De~LL~~l~~~L~~~--~~~~fivLH~~GSH~-----P~Y~~RyP~~~-~~F~p~~~~~~~~~~~~~~~~n~Y 420 (545)
T PRK11598 349 CIDGECYDEVLFHGLENYINNL--QGDGVIVLHTIGSHG-----PTYYNRYPPQF-RKFTPTCDTNEIQTCTQQQLVNTY 420 (545)
T ss_pred cCCCCccHHHHHHHHHHHHHhc--CCCeEEEEeCCCCCC-----cchhhcCChhh-ccCCCCCCccccccccHHHHHHHH
Confidence 1222345788888888888754 456899999999999 53 244444 22221 112346789
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCccc----CCCeeeeeEeeCC-CC
Q psy1088 282 AAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLW----EGGVRGAGLIWSP-LL 356 (905)
Q Consensus 282 ~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~----e~~~rVPliI~~P-g~ 356 (905)
+++|.++|..||++++.|++.+.++||+||++||||+.+++++. + .++..| ++++|||||||+| +.
T Consensus 421 dnsI~ytD~~lg~ii~~Lk~~~~~~nT~iIy~SDHGe~lge~g~-------~--~hg~~y~~aP~~~~~VPliiw~s~~~ 491 (545)
T PRK11598 421 DNTILYVDYIVDKAINLLKQHQDKFNTSLVYLSDHGESLGENGI-------Y--LHGLPYAIAPDQQTHVPMLLWLSPDY 491 (545)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCCeEEEEECcCCCccccCCc-------c--cCCCccccCccccccccEEEEECcch
Confidence 99999999999999999999999999999999999999855431 1 233334 8899999999865 43
Q ss_pred cCC---------CeEEecceEehhHHHHHHHHhCCCCCCCcccc
Q psy1088 357 ESR---------GIVAEQYVHVSDWLPTLLSAANKSDIPNYVNS 391 (905)
Q Consensus 357 ~~~---------g~v~~~~vs~vDI~PTLl~laGi~~~P~~~~g 391 (905)
.+. ++..++++++.||+||||+++|++ .|....+
T Consensus 492 ~~~~~~~~~~l~~~~~~~~~s~ddl~~TlL~l~gI~-t~~y~~~ 534 (545)
T PRK11598 492 QKRYGVDQQCLQKQAQTQDYSQDNLFSTLLGLTGVQ-TKEYQAA 534 (545)
T ss_pred hccccchhhhhhhhccCCceeHHhHHHHHHHHhCCC-CCCCCCC
Confidence 321 122366899999999999999999 6665544
No 13
>PRK11560 phosphoethanolamine transferase; Provisional
Probab=99.95 E-value=2.1e-26 Score=268.18 Aligned_cols=270 Identities=13% Similarity=0.189 Sum_probs=183.6
Q ss_pred CCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCCCC
Q psy1088 58 GPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCERG 136 (905)
Q Consensus 58 ~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~~ 136 (905)
+++|||||+.|+.|+++++.||+++.+||+|++ ++++.+-++++ ++.|..|..+|+++..... .. .
T Consensus 246 ~~~~vVlViGESaRad~~slyGY~r~TtP~L~~--~~~~~~f~~~S~gt~T~~Slp~mfs~~~~~~--~~---------~ 312 (558)
T PRK11560 246 DDTYVVFIIGETTRWDHMGILGYERNTTPKLAQ--EKNLAAFRGYSCDTATKLSLRCMFVREGGAE--DN---------P 312 (558)
T ss_pred CCCEEEEEEEcccCHhhcccCCCCCCCCcchHh--cCCEEEecCccCCccchhhhHHHhcCCCccc--cc---------h
Confidence 567999999999999999999999999999987 35666444477 5777789999998754321 00 0
Q ss_pred CCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCccccc
Q psy1088 137 GLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWDL 216 (905)
Q Consensus 137 ~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~~ 216 (905)
.......+|.++|+++||+|.+++....-+ ...+.|++... + .... . ......
T Consensus 313 ~~~~~~~nlld~l~~aGy~t~w~SnQ~~~w-----~~n~~~~~~~~-~----~~~~---------------~--~~~~~~ 365 (558)
T PRK11560 313 QRTLKEQNVFAVLKQLGFSSELFAMQSEMW-----FYNNTMADNYA-Y----REQI---------------G--AEPRNR 365 (558)
T ss_pred hhhcccCCHHHHHHHCCCcEEEeeccccee-----eecCcccccch-h----hhhc---------------c--cccCCC
Confidence 001135689999999999999987421100 00011222110 0 0000 0 000011
Q ss_pred CCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCC--CChhhhhhcccc---------chhhHHHHHHHH
Q psy1088 217 HGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQ--APDHYLNIHRHI---------EDFKRSKFAAIL 285 (905)
Q Consensus 217 ~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~--~P~~~~~~~~~~---------~~~~~~~Y~~~v 285 (905)
.+...|+.+.+.+.++|++.. .+++|+++|+.++|. ||. .|+++ +.|.+. .+...+.|+++|
T Consensus 366 g~~~~D~~LL~~l~~~L~~~~-~~~~~ivLH~~GSH~-----~Y~~RyP~~f-~~F~p~~~~~~~~c~~~~~~n~YdnsI 438 (558)
T PRK11560 366 GKPVDDMLLVDEMKQSLGRNP-DGKHLIILHTKGSHY-----NYTQRYPRSF-ARYQPECIGVDSGCSKAQLINSYDNSV 438 (558)
T ss_pred CCCcChHHHHHHHHHHHHhcC-CCCeEEEEeccCCCc-----ChhhcCCHhh-hccCCcCCCcccccchHHHHHHHHHHH
Confidence 122347778888888887653 334677999999999 553 33332 333221 123457899999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccC-CCeeeeeEeeCCCC--------
Q psy1088 286 HKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWE-GGVRGAGLIWSPLL-------- 356 (905)
Q Consensus 286 ~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e-~~~rVPliI~~Pg~-------- 356 (905)
.++|..||++++.|++ +||+|||+||||+.+++ +++++|.+...++ +++|||||||+|+.
T Consensus 439 ~ytD~~lg~ii~~Lk~----~nTivIy~SDHGe~lge-------~~~lhg~~~~~~~~~~~~VPliv~~s~~~~~~p~~~ 507 (558)
T PRK11560 439 LYVDHFISSVIDQLRD----KKAIVFYAADHGESINE-------REHLHGTPREMAPPEQFRVPMMVWMSDKYLANPDNA 507 (558)
T ss_pred HHHHHHHHHHHHHHHh----cCeEEEEEcCCCCcCCC-------CcccCCCCcccCCccCeeeCEEEEEccccccCCccc
Confidence 9999999999999997 59999999999998733 3345666665555 89999999998432
Q ss_pred -----cCCCeEEecceEehhHHHHHHHHhCCCCCC
Q psy1088 357 -----ESRGIVAEQYVHVSDWLPTLLSAANKSDIP 386 (905)
Q Consensus 357 -----~~~g~v~~~~vs~vDI~PTLl~laGi~~~P 386 (905)
.+++++.+.++++.||+||||+++|++ .|
T Consensus 508 ~~~~~l~~~~~~~~~~s~~dlf~TlL~~~gv~-~p 541 (558)
T PRK11560 508 QAFAQLKKQADMKVPRRHVELFDTILGCLGYT-SP 541 (558)
T ss_pred hhHHHhccccccCCceeehhHHHHHHHHcCCC-CC
Confidence 123445688999999999999999999 44
No 14
>COG1368 MdoB Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=2.1e-22 Score=242.87 Aligned_cols=287 Identities=20% Similarity=0.276 Sum_probs=214.9
Q ss_pred CCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhC--ccccccccC-CC-ChhhHHhhh-cCCCCccCCCcccccc
Q psy1088 57 SGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSG--IILKNYYTV-QL-CTPSRSAIM-TGKHPIHTGMQHNVLY 131 (905)
Q Consensus 57 ~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~G--v~f~~~ys~-~~-~tPSrasll-TG~yP~~~Gi~~~~~~ 131 (905)
.+.||||+|+++++....+.........||+|++|++++ ..|.+++.+ +. ++....+++ +-.|+...|+.-..
T Consensus 259 ~~~~nvIvi~lES~~~~~~~~~~~g~~vtP~ln~l~~~~~s~~f~~ff~~~~~~~~~~ae~~~~~s~~~~~~~~~~~~-- 336 (650)
T COG1368 259 AKGPNVIVIQLESFQGFLINPKVNGIEVTPNLNKLQKGGVSLLFSNFFGGVTAGSTFDAETGVLSSLFPAARGSVFQT-- 336 (650)
T ss_pred cCCCcEEEEEeccccchheeccccCCCCCCcHHHHhccCchhHHHHHHhhcCCCCcccchhhhccCCCCCccCceeee--
Confidence 578999999999997555555445578999999999996 888998873 33 444445555 45566555543221
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCC
Q psy1088 132 GCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLE 211 (905)
Q Consensus 132 ~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~ 211 (905)
.+.. ...+|+.+|++.||+|+++..+..++++........|||.+++ ...|.....
T Consensus 337 ----~~~~-~~~slp~iLk~~GY~t~a~hg~~~~fwNr~~~yk~~Gfd~f~~-----~~~~~~~~~-------------- 392 (650)
T COG1368 337 ----YGDN-KYSSLPAILKQQGYKTAALHGGDGSFWNRKSFYKIFGFDDFFD-----LESFDGNAD-------------- 392 (650)
T ss_pred ----cCCC-CcccHHHHHhcCCceEEEEeCCCcceecHHHHHHhcChhhccc-----hhhcCCCcc--------------
Confidence 2222 2689999999999999999998888888887788889998876 122221111
Q ss_pred cccccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhh-hcc--ccchhhHHHHHHHHHHH
Q psy1088 212 PAWDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLN-IHR--HIEDFKRSKFAAILHKL 288 (905)
Q Consensus 212 ~~~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~-~~~--~~~~~~~~~Y~~~v~~l 288 (905)
........|..+++++++.+++. .+|||.++.+.+.|. ||..|+.+.+ .+. .........|.+.++|.
T Consensus 393 --~~~~~G~sD~~l~~~~~~~l~~~--~~Pfy~~~iTlsnH~-----Pf~~~~~~~~~~~~~~~~~~~~l~~y~~~~~y~ 463 (650)
T COG1368 393 --SEIGWGLSDKDLFKESLPLLKKL--KKPFFSFVITLSNHG-----PFELPEGKRNELLEEPLSASTALANYLQAVHYA 463 (650)
T ss_pred --cccCCCCchHHHHHHHHHHHHhc--CCChHheEEeccCCC-----CCCCChhhhcccccccCcCcccccchhhhhhhH
Confidence 11222356888899999999976 579999999999999 9998877663 121 11222567899999999
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceE
Q psy1088 289 DESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVH 368 (905)
Q Consensus 289 D~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs 368 (905)
|+++|.+++.|+++|+++||+||+++||.....++.. ....+.|. ...+....|||++|+.||.... ...+...+
T Consensus 464 D~al~~F~~~lkk~~~~~~sviv~~GDH~~~~~~~~~---~~~~~~~~-~~~~~~~~~vP~~i~~~g~~~~-~~~~~~~~ 538 (650)
T COG1368 464 DEALGQFIDKLKKSGLYKNSVIVLYGDHYGISGNQNL---AMPKFLGK-SYDIDMLQRVPLLIHAPGIKNK-KKIDTVGG 538 (650)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCCCcchhhhh---hhhhhccc-ccchhHHhcCCeEEEcCCCCcc-cccccccc
Confidence 9999999999999999999999999999998855431 11223333 3445556789999999998754 56688899
Q ss_pred ehhHHHHHHHHhCCC
Q psy1088 369 VSDWLPTLLSAANKS 383 (905)
Q Consensus 369 ~vDI~PTLl~laGi~ 383 (905)
++||+||+++++|++
T Consensus 539 qidi~pTil~l~gi~ 553 (650)
T COG1368 539 QLDIAPTILGLLGIS 553 (650)
T ss_pred ccchhhHHHHHcCCC
Confidence 999999999999997
No 15
>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.
Probab=99.71 E-value=4.5e-16 Score=175.21 Aligned_cols=294 Identities=16% Similarity=0.183 Sum_probs=188.3
Q ss_pred CCCCCeEEEEEecCCCCCcccCCC---CCC----CCCchHHHHHHhCcccccccc--CCCChhhHHhhhcCCCCcc--CC
Q psy1088 56 SSGPPHIIFILADDLGWNDVGFHG---LDQ----IPTPNIDALAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIH--TG 124 (905)
Q Consensus 56 ~~~~PNIVlI~~D~lr~d~l~~~G---~~~----~~TPnLd~LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~--~G 124 (905)
..+.|||||++.|+|++..+++.. ... ..++++++|...|+.++.... .+.|+|+.++|+||..+.+ .|
T Consensus 3 ~~~~kNVIl~igDGmg~~~~taar~~~~~~~~~~~~~l~~d~~~~~G~~~T~~~~~~vtDSAa~aTA~~tG~Kt~~~~ig 82 (384)
T cd00016 3 KKKAKNVILFIGDGMGVSTITAARIYKGQENGAEEGKLLFDDFPLTGLSKTYSVDSQVTDSAATATAYATGVKTNNGAIG 82 (384)
T ss_pred CCCCCeEEEEEeCCCCHHHHHHHHHHhcCcccccccccchhccchhheeecccCCCCccccHHHHhHhhhcccccCceee
Confidence 346799999999999998888743 111 367999999999999996553 3689999999999999876 34
Q ss_pred CccccccCCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCC---CCC-----------------Ccccccccc
Q psy1088 125 MQHNVLYGCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYT---PTF-----------------RGFESHLGY 184 (905)
Q Consensus 125 i~~~~~~~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~---p~~-----------------~GFd~~~g~ 184 (905)
+...... .....+....+|.+.++++||.|.+|....+....+..+ ... +++|..+
T Consensus 83 v~~~~~~--~~~~~~~~~~ti~e~ak~~G~~tGiVtT~~ithATPAa~~AH~~~R~~~~~Ia~q~~~~~~g~~~dv~~-- 158 (384)
T cd00016 83 VSADVSR--DDTDNGKPVTSVLEWAKAAGKATGIVTTTRVTHATPAAFYAHVPDRNWEEDIAEQLIEEAPGRGIDVLL-- 158 (384)
T ss_pred ecCCCCc--ccccCCcchhhHHHHHHHcCCCEEEEeeeecCCCcchhhhccccccCCHHHHHHHHhhccCCCCCeEEE--
Confidence 4332211 123455678999999999999999998865544322211 111 1444433
Q ss_pred ccCCCCcCCchhH-------h-----hhhhcccccc--------------------CCCccc--cc----CCCcccHHHH
Q psy1088 185 WTGHQDYFDHSAE-------E-----MKMWGLDMRR--------------------DLEPAW--DL----HGKYSTDVFT 226 (905)
Q Consensus 185 ~~~~~~y~~~~~~-------~-----~~~~g~d~~~--------------------~~~~~~--~~----~~~~~d~~~~ 226 (905)
+|+..+|.+... . ...-|+.+.. ...-.+ .. ...-.-..++
T Consensus 159 -GGG~~~f~~~~~~g~r~d~~~l~~~~~~~gy~~v~~~~~l~~~~~~~~k~lglF~~~~l~~~~~r~~~~~~~psL~emt 237 (384)
T cd00016 159 -GGGRRYFLPSTTGGGRKDGRDLIAEWKAKGYQYVWNRTELLAVNVATDKLLGLFADSHLPYELDRDPFGKGEPSLAEMT 237 (384)
T ss_pred -eCChhhccccCCccccccchHHHHHHHHcCCEEECCHHHHhhccccCCcEEEEeCCCCCChhhccCccccCCCCHHHHH
Confidence 344445543110 0 0001111111 000000 00 1112346779
Q ss_pred HHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy1088 227 AEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLS 306 (905)
Q Consensus 227 d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~d 306 (905)
+.++++|++. .++||+++....+|... |.. ....|...+..+|..|+.+++.++ ..+
T Consensus 238 ~~al~~L~~~--~~gFfl~ve~~~iD~~g----------------H~~--d~~~~~~~l~~~D~av~~~l~~l~---~~~ 294 (384)
T cd00016 238 EKAIDVLSKN--PNGFFLMVEGGRIDHAH----------------HAN--DAAGALSETLAFDDAVEAALDFAK---KDG 294 (384)
T ss_pred HHHHHHHHhc--CCcEEEEEeCCCCCccc----------------CCC--cHHHHHHHHHHHHHHHHHHHHHhh---CCC
Confidence 9999999753 48999999988888721 111 123588999999999999999998 357
Q ss_pred CEEEEEEcCCCCCCcCCCCCCCCCccccCC-------------------CCcccCCCeeeeeEeeCCCCcCCCeEEecce
Q psy1088 307 NSIIVFVSDNGGAAAGFNLNAASNWPLRGV-------------------KNTLWEGGVRGAGLIWSPLLESRGIVAEQYV 367 (905)
Q Consensus 307 nTlIIftSDHG~~~~g~~~~~gsn~plrg~-------------------k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~v 367 (905)
+|+||+|||||....-.+...-.+. ..+. ..+.-..+.-||++.++|+-. .....+
T Consensus 295 dTLiIvTADHg~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~~~~Htg~~Vpv~a~Gp~a~----~f~g~~ 369 (384)
T cd00016 295 DTLVVVTADHSHGGTILGYAGRGNP-ILGLADAPELDVDGLPYTTLTYANTTGTHGGEDVPVFAYGPGSH----LFRGVM 369 (384)
T ss_pred CeEEEEECCCCCCccccCCCCCCCc-ccccccccccccCCCCceEEEecCCCCCCcCceeeEEeecCCcc----ccCcce
Confidence 9999999999986521111000000 0000 012223355699999999863 346789
Q ss_pred EehhHHHHHHHHhCC
Q psy1088 368 HVSDWLPTLLSAANK 382 (905)
Q Consensus 368 s~vDI~PTLl~laGi 382 (905)
.+.||++.|+.++++
T Consensus 370 ent~I~~~i~~al~~ 384 (384)
T cd00016 370 ENTEIAHVMAYALGL 384 (384)
T ss_pred ecHHHHHHHHHHhcC
Confidence 999999999999875
No 16
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=99.70 E-value=1.3e-16 Score=185.43 Aligned_cols=273 Identities=14% Similarity=0.197 Sum_probs=180.3
Q ss_pred CCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCCCC
Q psy1088 58 GPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCERG 136 (905)
Q Consensus 58 ~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~~ 136 (905)
++-++|||+.|+.|+++++.+|+++.+||.|+++.++=+.|.+++| .+.|..|..+|++-. |..++ ..
T Consensus 230 ~~~~~VLVIGESaR~~n~~L~GY~R~TtP~L~~~~~~~~~f~~~~Scgt~Ta~Slpcmfs~~-~r~~~----------~~ 298 (555)
T COG2194 230 KPRTVVLVIGESARRDNMSLYGYPRETTPFLAKLRGPLTVFFNAYSCGTATALSLPCMFSRD-PRENY----------SE 298 (555)
T ss_pred CCcEEEEEEechhhHhhccccCCCCCCChhHHhccCCceeeccccccccceeeeehhhcccC-chhcc----------cc
Confidence 3557999999999999999999999999988776554478999998 688888999998732 21111 12
Q ss_pred CCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcc-cc
Q psy1088 137 GLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPA-WD 215 (905)
Q Consensus 137 ~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~-~~ 215 (905)
........|.++|+++||.|.++.....+-..-...+...-.|. ..... ..
T Consensus 299 ~~~~~~~Nl~dilkrAG~~t~W~~nq~~~k~~~~~~~~~~~~d~----------------------------~~~~~~~~ 350 (555)
T COG2194 299 QKALHQDNLLDLLKRAGYKTFWISNQTGCKGVTDRIPIANRADE----------------------------NYFLKGYC 350 (555)
T ss_pred ccccccccHHHHHHHcCCeEEeeccCcccccchhhchhhhhhhh----------------------------hccccccc
Confidence 23446788999999999999998754111100000000000000 00000 22
Q ss_pred cCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhcccc----------chhhHHHHHHHH
Q psy1088 216 LHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHI----------EDFKRSKFAAIL 285 (905)
Q Consensus 216 ~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~----------~~~~~~~Y~~~v 285 (905)
..+.-.|+.+.....+.+.... .+.-|+++|+.+.|. ..+. ..|+++. +|.+. .....+.|+++|
T Consensus 351 ~~~~~~De~LL~~~~~~l~~~~-~~~~~IVLH~~GSHp-~Y~~--Ryp~~~~-kF~p~c~~~~~~~c~~~~lvN~YDNti 425 (555)
T COG2194 351 NGGNCYDEALLPDLDQVLAQEL-SQKKLIVLHLMGSHP-NYYD--RYPKEFA-KFTPTCDTNDISSCSQEQLVNCYDNTI 425 (555)
T ss_pred cCcccchHHHhHhHHHHhhccC-CCCeEEEEEccCCCc-cHhh--hCCHHHh-ccCCCCCccccccCcHHHHHHhhhchh
Confidence 2344456777777777776422 455899999999994 2211 2333333 22221 235678999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccc-cCCC-CcccCCCeeeeeEeeCCCCc--CCCe
Q psy1088 286 HKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPL-RGVK-NTLWEGGVRGAGLIWSPLLE--SRGI 361 (905)
Q Consensus 286 ~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~pl-rg~k-~~~~e~~~rVPliI~~Pg~~--~~g~ 361 (905)
.|+|..|.++++.|+++.- +|.+|++||||++.++.+ +. .|.. .....+.+|||||+|..... +.++
T Consensus 426 lYtD~~L~~vi~~Lk~~~~--~~~liY~SDHGEslgEn~-------~ylhg~p~~~ap~~q~~VP~i~w~S~~~~~~~~~ 496 (555)
T COG2194 426 LYTDYFLSKLIDQLKDKKD--NTSLIYFSDHGESLGENG-------PYLHGTPYEIAPQEQYHVPFIVWSSDKFQQKHPR 496 (555)
T ss_pred hhhHHHHHHHHHHHHhCCC--CeEEEEEcCccHhhccCC-------cccccCcccCCchhheeeeEEEEEChHHHhhhhh
Confidence 9999999999999999874 999999999999984432 22 1111 12458899999999976421 1121
Q ss_pred ---------EEe-cceEehhHHHHHHHHhCCC
Q psy1088 362 ---------VAE-QYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 362 ---------v~~-~~vs~vDI~PTLl~laGi~ 383 (905)
... ...++.+++-|+|.+.++.
T Consensus 497 ~~~~~c~~~~~~~~~~~~d~lf~s~lg~~~~~ 528 (555)
T COG2194 497 QKDLRCLNYFAQELSYSHDNLFHSLLGVSGVK 528 (555)
T ss_pred hhHHHHHHHhhhccchhHHHhHhhccCccccc
Confidence 011 2257899999999988887
No 17
>PRK05362 phosphopentomutase; Provisional
Probab=99.67 E-value=1.5e-15 Score=169.57 Aligned_cols=177 Identities=15% Similarity=0.148 Sum_probs=128.7
Q ss_pred CCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCccc
Q psy1088 135 RGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAW 214 (905)
Q Consensus 135 ~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~ 214 (905)
...++...+|+++.|+++||+|.++||-. ......|++....
T Consensus 216 d~~~~p~~~Tl~d~L~~aG~~v~~VGki~-------DiFa~~G~t~~~~------------------------------- 257 (394)
T PRK05362 216 DYALKPPAPTVLDKLKEAGGEVIAVGKIA-------DIFAGQGITEKVK------------------------------- 257 (394)
T ss_pred CcCcCCCCCCHHHHHHHCCCeEEEEEehh-------hcccCCCcccccC-------------------------------
Confidence 35566678999999999999999999832 1112234443210
Q ss_pred ccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHH
Q psy1088 215 DLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGK 294 (905)
Q Consensus 215 ~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ 294 (905)
.-.....++.+++.|++ .++++|+|+++..++.. +.|.. ....|.+++..+|.+||+
T Consensus 258 ----~~~~~~~~~~ale~L~~--~~~~~fvfvn~~~~D~~---------------~GH~~--~~~~y~~ale~~D~~lg~ 314 (394)
T PRK05362 258 ----TKSNMDGMDATIEEMKE--AGDNGLVFTNLVDFDSL---------------YGHRR--DVAGYAAALEEFDARLPE 314 (394)
T ss_pred ----CCCHHHHHHHHHHHHHh--CCCCcEEEEecccCccc---------------cCCcC--CHHHHHHHHHHHHHHHHH
Confidence 01234567888888874 25799999999888761 12322 236799999999999999
Q ss_pred HHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHH
Q psy1088 295 VVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLP 374 (905)
Q Consensus 295 ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~P 374 (905)
|++.|+ +||+||||||||...... +..++ ..+|||||++|++. +...+..++++||+|
T Consensus 315 ll~~L~-----~~tlliiTaDHG~d~t~~-----------gt~HT----~e~VPlIi~gp~v~--~~~l~~~~sl~DI~p 372 (394)
T PRK05362 315 LLAALK-----EDDLLIITADHGNDPTWP-----------GTDHT----REYVPLLVYGPKFK--GGSLGHRETFADIGA 372 (394)
T ss_pred HHHHhc-----cCCEEEEeCCCCCCCCCC-----------CCCCC----CCceeEEEEECCCC--ccEECCCCEehhHHH
Confidence 999997 389999999999743111 11111 35899999999974 556788899999999
Q ss_pred HHHHHhCCCCCCCcccccccccccc
Q psy1088 375 TLLSAANKSDIPNYVNSTVENIIPR 399 (905)
Q Consensus 375 TLl~laGi~~~P~~~~g~g~sl~p~ 399 (905)
||++++|++ .|. .|+|+++.
T Consensus 373 Tia~l~Gv~-~P~----~G~Sfl~~ 392 (394)
T PRK05362 373 TIADNFGVE-PME----YGKSFLDE 392 (394)
T ss_pred HHHHHcCcC-CCC----CCCcHHHh
Confidence 999999999 663 46777764
No 18
>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase). These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....
Probab=99.61 E-value=7.1e-16 Score=174.47 Aligned_cols=234 Identities=18% Similarity=0.186 Sum_probs=131.4
Q ss_pred EEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc--CCCChhhHHhhhcCCCCccCCCccccccCCCC----
Q psy1088 62 IIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCER---- 135 (905)
Q Consensus 62 IVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~---- 135 (905)
||+|++|+++++.+..+- ..+|||.+|+++|+.+.+.++ ++.|.|+++||+||.+|..||+..+.++....
T Consensus 1 vv~i~iDGl~~~~l~~~~---~~~p~l~~l~~~G~~~~~~~s~~Ps~T~~~~~si~TG~~P~~HGi~~~~~~~~~~~~~~ 77 (365)
T PF01663_consen 1 VVVIGIDGLRPDLLDRYI---GNLPNLKRLAEEGVYGPNLRSVFPSTTAPNWASILTGAYPEEHGIIGNYWYDPKTGKES 77 (365)
T ss_dssp EEEEEETT-BHHHHHHHH---TSSHHHHHHHHHSEEECEEE-SSSBSHHHHHHHHHHSS-HHHHS--SSCEEETTTTEEE
T ss_pred cEEEEEeCCCHHHHHhHh---ccCHHHHHHHHCCCCCCCceecCCCCcccchhhhhcCccccccCCccccccCccccccc
Confidence 799999999999886431 459999999999999998776 35556899999999999999999976532110
Q ss_pred ---CCC----CCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhcccccc
Q psy1088 136 ---GGL----PLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRR 208 (905)
Q Consensus 136 ---~~l----~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~ 208 (905)
... .....++.+.++++|.++++++...... ..... ..-++..++.+.....++.........-+.. ..
T Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~~~g~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~-~~ 153 (365)
T PF01663_consen 78 TFWDELGDSGDVDSPPIWESLAKAGKKVAVFGWPGTHP-PYPGL--NGILDPSFGTPDTYRYYSPKSLSDELYDGQG-DN 153 (365)
T ss_dssp CEESSSSGGGCCCCHEHHHHHHHTT-EEEECS-CTTSS-HHHCC--TCCCCTCTT-EESSTCCCCSCCHHHHHHHC--HH
T ss_pred cccccccccccccchhHHHHHHHcCCceeeeccccccc-ccccc--ccccccccccccccccccccccccchhhccc-cc
Confidence 110 1233589999999999999885322111 00000 0001111111111111100000000000000 00
Q ss_pred CCCcc-cccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHH
Q psy1088 209 DLEPA-WDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHK 287 (905)
Q Consensus 209 ~~~~~-~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~ 287 (905)
..... ........++.+.+.+...+++ .+|-|+++++..++. ....+.. ....+..+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~pdl~~~~~~~~D~------------~~H~~g~----~s~~~~~~~~~ 214 (365)
T PF01663_consen 154 PLYLAWFFEQSPELDEWITDAAEYLIQK---ERPDLIFVYFPEPDH------------IGHRYGP----DSPEIEDAYRR 214 (365)
T ss_dssp CHSTCHHHSSSHHHHHHHHHHHHHHHHT---TTESEEEEEEECCHH------------HHHHH-T----TSHHHHHHHHH
T ss_pred cccccccccchHHHHHHHHHHHHHHHhh---CCCCEEEEEecCCCc------------cccCCCC----CCHHHHHHHHH
Confidence 00000 0001112234444445555554 458899998877766 1111222 23457889999
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCc
Q psy1088 288 LDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAA 321 (905)
Q Consensus 288 lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~ 321 (905)
+|.+||+|++.|++.+..++|.||++||||....
T Consensus 215 ~D~~ig~l~~~l~~~~~~~~~~iiv~SDHG~~~~ 248 (365)
T PF01663_consen 215 IDQAIGRLLEALDENGLLEDTNIIVTSDHGMTPV 248 (365)
T ss_dssp HHHHHHHHHHHHHHTT-TTTEEEEEEES---EEE
T ss_pred HHHHHHHHHHHHHhhCCCCceEEEEEccCccccc
Confidence 9999999999999999999999999999998763
No 19
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=99.59 E-value=3.4e-14 Score=162.27 Aligned_cols=194 Identities=13% Similarity=0.117 Sum_probs=125.8
Q ss_pred CCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCC-CcCCchhHhhhhhccccccCCCcccccCCC
Q psy1088 141 SEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQ-DYFDHSAEEMKMWGLDMRRDLEPAWDLHGK 219 (905)
Q Consensus 141 ~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~-~y~~~~~~~~~~~g~d~~~~~~~~~~~~~~ 219 (905)
-..||+++|.++|++..-+.-. .-|-....|++|+. ..|..... .-.......+++....
T Consensus 303 ~~n~lge~ls~~g~~qlriaET-------------eKyaHVTfFfnGg~e~~f~ge~r------~lv~sp~v~tyd~~Pe 363 (501)
T TIGR01307 303 LTNTLGEVLAKHDLTQLRIAET-------------EKYAHVTFFFNGGVEVPFAGETR------TLIPSPKVATYDLQPE 363 (501)
T ss_pred CCCCHHHHHHHCCCcEEEEeec-------------cccceeeeeecCCccccCCCcee------EEeCCCCCCccccCCc
Confidence 3579999999999988776531 11222222333332 22211000 0000111223333444
Q ss_pred cccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy1088 220 YSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEAL 299 (905)
Q Consensus 220 ~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~L 299 (905)
.++..+++.++++|++ ++|+|+++++..+.. ..|.. ....|..+|..+|.+||+|+++|
T Consensus 364 Msa~evtd~~i~~I~~---~k~dfi~vnfan~Dm----------------vGHtg--~~~a~v~AIE~vD~~LGrIl~aL 422 (501)
T TIGR01307 364 MSAKAVTDAVLEAIAQ---GKFDLIVVNFANPDM----------------VGHTG--NFEAAIKAVEALDVCLGRIVEAC 422 (501)
T ss_pred cCHHHHHHHHHHHHhc---cCCCEEEEECCCccc----------------ccCCC--CHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999975 689999999976655 22222 22478999999999999999999
Q ss_pred HHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHH
Q psy1088 300 EQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSA 379 (905)
Q Consensus 300 k~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~l 379 (905)
++.|+ +||||||||....... ....|.. ...+.+|||||+||+..+ ......+++||+||||++
T Consensus 423 ke~G~----~VIiTADHGnae~m~d---~~g~p~t------~HT~~~VP~Ii~~p~~i~---~~~~~~sL~DIaPTiLdL 486 (501)
T TIGR01307 423 KKVGG----TLFLTADHGNAEEMID---ENGNPHT------AHTTNPVPFVCVGAKNVK---LIREGGVLADIAPTILDL 486 (501)
T ss_pred HhCCC----EEEEEcCCCChhhccC---CCCCccc------CCCCeEeeEEEEECCccc---ccCCCceEhHHHHHHHHH
Confidence 99875 6999999996321100 0011221 234689999999996432 124457899999999999
Q ss_pred hCCCCCCCcccc
Q psy1088 380 ANKSDIPNYVNS 391 (905)
Q Consensus 380 aGi~~~P~~~~g 391 (905)
+|++ .|..+.|
T Consensus 487 ~Gi~-~P~emdG 497 (501)
T TIGR01307 487 MGLE-QPAEMTG 497 (501)
T ss_pred hCcC-CCCCCCC
Confidence 9999 7877755
No 20
>PF02995 DUF229: Protein of unknown function (DUF229); InterPro: IPR004245 Members of this family are uncharacterised with a long conserved region that may contain several domains.
Probab=99.57 E-value=8.6e-14 Score=162.62 Aligned_cols=272 Identities=18% Similarity=0.146 Sum_probs=173.1
Q ss_pred CCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHH-HHHhCcccccccc--CCCChhhHHhhhcCCCCccCCCccccccC
Q psy1088 56 SSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDA-LAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHNVLYG 132 (905)
Q Consensus 56 ~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~-LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~~~~~ 132 (905)
...+|||+||++||++.... .-.+|..-+ |.+.|...-..|. +..|.|...+|+||.+-....+......
T Consensus 123 ~~~~~sV~ilgiDS~Sr~~f------~R~mPkT~~~l~~~~~~~f~gyn~vgdnt~~Nl~alltG~~~~~~~~~~~~~~- 195 (497)
T PF02995_consen 123 SESKPSVLILGIDSMSRMNF------RRSMPKTVKFLRELGAVEFKGYNKVGDNTFPNLMALLTGKIFSEKELKADCNK- 195 (497)
T ss_pred cCCCCcEEEEEeeccChhhh------hhcCcHHHHHHHhCCCEEEccccccCCCcHHHHHHHHhcCCCCchhhcccccc-
Confidence 46889999999999976544 335776555 4444554444554 6888999999999962111111111100
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCc
Q psy1088 133 CERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEP 212 (905)
Q Consensus 133 ~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~ 212 (905)
..........+.|...++++||.|++.-.|.... .+.+...||. ....|||-..................
T Consensus 196 ~~~~~~~d~~~~iw~~fk~~GY~T~~~ED~~~~~---~f~y~~~GF~------~~ptDhy~rpf~~~~e~~~~~~~~~~- 265 (497)
T PF02995_consen 196 PYCKGYLDKCPFIWKDFKKAGYVTAYAEDWPSIG---TFNYRKKGFK------KQPTDHYLRPFMLAAEKHLNKFRRFG- 265 (497)
T ss_pred ccCCCCcccccHHHHHHhhcCceEEEecCccccc---ccccCCCCCC------CCCCCcccchHHHHHHHhccceeccC-
Confidence 1122233467899999999999999876553211 1222244554 44566665433221111111100000
Q ss_pred ccccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHH
Q psy1088 213 AWDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESV 292 (905)
Q Consensus 213 ~~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~V 292 (905)
.....+...-+.+.+.+.+|++... +.|+|.++++...|+ .+.+.+..+|..+
T Consensus 266 ~~C~g~~~~~~~~~dy~~~f~~~y~-~~~~F~~~w~~~~~h--------------------------~~~~~~~~~D~~~ 318 (497)
T PF02995_consen 266 LKCLGGRESHEYLLDYIEQFMEAYK-DRPKFGFFWFNSLSH--------------------------DDFNGPSSLDDDL 318 (497)
T ss_pred CCccCchHHHHHHHHHHHHHHHHhh-ccceeeEEEeccccc--------------------------cccchhHHHHHHH
Confidence 0134445556777888888887654 788999999887777 1457788999999
Q ss_pred HHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEe-eCCCCcCC---------CeE
Q psy1088 293 GKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLI-WSPLLESR---------GIV 362 (905)
Q Consensus 293 G~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI-~~Pg~~~~---------g~v 362 (905)
-++|+.+++.|+++||+|||.||||...+... .......| .|.|++. +-|..... ..-
T Consensus 319 ~~~l~~~~~~g~l~nT~vi~~SDHG~R~g~~r----------~t~~G~~E--erlP~l~i~lP~~fr~~~p~~~~nL~~N 386 (497)
T PF02995_consen 319 LDFLEKLQEEGVLDNTFVIFMSDHGLRFGSFR----------ETSQGKLE--ERLPFLFISLPPWFREKYPEAVENLKEN 386 (497)
T ss_pred HHHHHHhhhcCcccccEEEEEcCCCcccCccc----------cccccchh--hcCccceeEcCHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999998874422 22222233 3678754 45544221 012
Q ss_pred EecceEehhHHHHHHHHhCCC
Q psy1088 363 AEQYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 363 ~~~~vs~vDI~PTLl~laGi~ 383 (905)
...+++..|+.-||.+++.+.
T Consensus 387 ~~rL~T~~Dlh~TL~~il~~~ 407 (497)
T PF02995_consen 387 QNRLTTPFDLHATLKDILNLQ 407 (497)
T ss_pred HhccCChhHHHHHHHHHhccc
Confidence 367899999999999999887
No 21
>KOG2645|consensus
Probab=99.56 E-value=5.3e-14 Score=157.32 Aligned_cols=292 Identities=15% Similarity=0.159 Sum_probs=173.5
Q ss_pred cCCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc--CCCChhhHHhhhcCCCCccCCCccccccC
Q psy1088 55 ASSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHNVLYG 132 (905)
Q Consensus 55 ~~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~~~~~ 132 (905)
....+|.+|+|.+|++|++.+.. ..||+|..|++.|+..++.+. .+.|.|.+.||+||+||..||+..+..++
T Consensus 18 ~~~~~p~lllis~DGFr~~yl~~-----~~~p~i~~l~~~gv~~~~~~pvFpT~TfPNhySivTGlype~HGIv~N~~~D 92 (418)
T KOG2645|consen 18 SGSTHPKLLLISFDGFRADYLYK-----VLTPNIHKLASCGVWVTYVIPVFPTKTFPNHYSIVTGLYPESHGIVGNYFFD 92 (418)
T ss_pred ccCCCCCEEEEEecccchhhccC-----ccCccHHHHHhccccccEEEecCcccccCCcceeeecccchhceeeceeeec
Confidence 34567899999999999998863 679999999999999999665 47788999999999999999999998765
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCc
Q psy1088 133 CERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEP 212 (905)
Q Consensus 133 ~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~ 212 (905)
........... ....--.|..|. .-..+....|.....-+|.|..--+.... . .+
T Consensus 93 p~~~~~F~~~~-----------~~~~~~~ww~~e-PiW~t~~~~~~kaa~~~wpg~~v~~~~~~-------~------~~ 147 (418)
T KOG2645|consen 93 PKTNKEFDLFT-----------NSDLEPFWWNGE-PIWVTARKQGRKVATFFWPGCEVEIHGYI-------P------DP 147 (418)
T ss_pred cccccccccCC-----------CccccccccCCC-cchhhhhhcCCceeEEecCCccccccccc-------c------cc
Confidence 42211110000 001111122221 01111112222222223322211110000 0 00
Q ss_pred ccccCCCcccHHHHHHHHHHHH--cCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHH
Q psy1088 213 AWDLHGKYSTDVFTAEAVDIIH--NHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDE 290 (905)
Q Consensus 213 ~~~~~~~~~d~~~~d~a~~~I~--~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~ 290 (905)
....+ .+.-+.+++...++ -...+.|-|+.+.+..+....+ .........-.++..+|.
T Consensus 148 ~~~~n---~~~~~~~~~~~i~~~~~~~~e~p~l~~~Y~~~pD~~gh----------------~~Gp~~~~v~~~l~~vD~ 208 (418)
T KOG2645|consen 148 YDIYN---QSVPLEERADTVLDLDLPEKERPDLLLLYVEEPDHSGH----------------RYGPDSPEVEKALKEVDD 208 (418)
T ss_pred ccccc---ccccHHHHHHHHhccccccccCCCceEEeccCCCcccc----------------ccCCCcHHHHHHHHHHHH
Confidence 00000 11222333333333 2234678888887777666221 111112235688999999
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCC-------------------------------------------CC-
Q psy1088 291 SVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFN-------------------------------------------LN- 326 (905)
Q Consensus 291 ~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~-------------------------------------------~~- 326 (905)
.||.|++.|+++++.+++-|||+||||+...... ..
T Consensus 209 ~i~~L~~~Lk~r~L~~~vNvIi~SDHGM~~~~~~~~~~~d~l~~~~~~~~~~gp~~~i~~~~~~~~~ev~~~l~~~~~~~ 288 (418)
T KOG2645|consen 209 FIGYLIKGLKDRNLFEDVNVIIVSDHGMTDICDKKIIWVDYLPDLVSTVVDEGPVARIRPKKDEIVKEVYANLSCAKPEH 288 (418)
T ss_pred HHHHHHHHHHHccccccceEEEeecCCccccccceeehhhhhhhhhhhhcccccceEEEecccccHHHHHHhhhccCCCc
Confidence 9999999999999999999999999999875110 00
Q ss_pred --------------------------------------CCCCcc--ccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecc
Q psy1088 327 --------------------------------------AASNWP--LRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQY 366 (905)
Q Consensus 327 --------------------------------------~gsn~p--lrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~ 366 (905)
..++.+ +..+.....-..+|+-++.++|.+.+..+ -.+
T Consensus 289 ~~~kvy~k~dlP~r~hy~~~~ri~~i~l~~d~g~sv~~~~~~~~~~~g~hGydn~~~~M~~if~a~Gp~F~~~~~--~~p 366 (418)
T KOG2645|consen 289 EHVKVYLKEDLPKRLHYKKSDRIGPIVLLADPGWSVVKSETDDPEALGDHGYDNNFSDMRTIFVGHGPSFKKNTK--VPP 366 (418)
T ss_pred cceeccccccCchhhcccccccCCceEEEecCcEEEEeccccchhhhccccccccchhhhhhhhhcccccCCCcc--cCC
Confidence 000110 11122233345678888889998864333 367
Q ss_pred eEehhHHHHHHHHhCCCCCCCc-ccccccccc
Q psy1088 367 VHVSDWLPTLLSAANKSDIPNY-VNSTVENII 397 (905)
Q Consensus 367 vs~vDI~PTLl~laGi~~~P~~-~~g~g~sl~ 397 (905)
+..++|+.-+++++|+.+.|.. .-+.+.+++
T Consensus 367 fenv~vyn~~~~ll~l~~~pnNGt~~~~~~lL 398 (418)
T KOG2645|consen 367 FENVEIYNLLCDLLGLRPAPNNGTHGFLRSLL 398 (418)
T ss_pred ccceehhhhhhhhcCCccCCCCCCccchhhhh
Confidence 8999999999999999955543 233334444
No 22
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.
Probab=99.51 E-value=7.6e-14 Score=159.02 Aligned_cols=220 Identities=16% Similarity=0.196 Sum_probs=131.1
Q ss_pred CCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCCCC
Q psy1088 58 GPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCERG 136 (905)
Q Consensus 58 ~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~~ 136 (905)
.+.+||||++|+++++.+...-. ...+|||.+|+++|+...-.-+ ++.|.|+++||+||.+|..|||.+|..+.....
T Consensus 11 ~~~~vvvi~vDGl~~~~l~~~~~-~g~~P~L~~l~~~G~~~~~~s~~Ps~T~p~~tSi~TG~~P~~HGI~gn~~~dp~~~ 89 (408)
T TIGR02335 11 PQRPTVVICVDGCDPEYINRGIA-DGVAPFIAELTGFGTVLTADCVVPSFTNPNNLSIVTGAPPAVHGICGNYYLDQDTG 89 (408)
T ss_pred CCCCEEEEEeCCCCHHHHHhhhh-cCCCchHHHHHhcCceeeccCCCCCcccccceeeecCCChhhCceecceEEecCCC
Confidence 45789999999999998864311 1359999999999986553222 466679999999999999999999876443211
Q ss_pred -------CCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCC---CCcCCchhHhh-hhhccc
Q psy1088 137 -------GLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGH---QDYFDHSAEEM-KMWGLD 205 (905)
Q Consensus 137 -------~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~---~~y~~~~~~~~-~~~g~d 205 (905)
.--...+||.+.++++|++|+.++.+.- . ..+. ..+.... .+.... ..+........ ...|
T Consensus 90 ~~~~~~~~~~~~~pTi~e~a~~aG~~ta~v~~~~~-~---~~~~-g~~l~~~-~~~~~~~~~~~~~~~g~~~~~~~vg-- 161 (408)
T TIGR02335 90 EEIMMTDAKYLRAPTILGEMSKAGVLTAVVTAKDK-L---RKVL-GHQLKGI-CFSSEKADQVNLEEHGVENILALVG-- 161 (408)
T ss_pred ceEEEeChhhhCCchHHHHHHHcCCeEEEEecccc-c---cccc-Ccccccc-cccccccccccccccchHHHHHHhC--
Confidence 1113578999999999999999863210 0 0000 0000000 000000 00000000000 0000
Q ss_pred cccCCCcccccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHH
Q psy1088 206 MRRDLEPAWDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAIL 285 (905)
Q Consensus 206 ~~~~~~~~~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v 285 (905)
...+ .....-.++..++.++..|++ .+|-|+|+. .+.. ..|........+.+++
T Consensus 162 ---~~~~--~~~~~~~~~~~~~~a~~~l~~---~~pdllyl~--~~D~----------------~gH~~Gp~S~e~~~~~ 215 (408)
T TIGR02335 162 ---RPRP--DVYSADLSLFVLDAGLSLLTN---ERPDLMYLS--TSDY----------------VQHKHAPGEPESNAFY 215 (408)
T ss_pred ---CCCC--ccchHHHHHHHHHHHHHHHhc---cCCcEEEec--CcCc----------------cccccCCCCHHHHHHH
Confidence 0000 000001234557888888875 368788763 2222 1122222335577899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCC
Q psy1088 286 HKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAA 320 (905)
Q Consensus 286 ~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~ 320 (905)
..+|..||+|++. +|+||+|||||+..
T Consensus 216 ~~lD~~l~~L~~~--------~~~vvvtaDHG~~~ 242 (408)
T TIGR02335 216 AAMDSRFKRYHEQ--------GAIVAITADHGMNA 242 (408)
T ss_pred HHHHHHHHHHHHC--------CCEEEEECCCCCcc
Confidence 9999999999873 69999999999875
No 23
>TIGR01696 deoB phosphopentomutase. This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.
Probab=99.51 E-value=4.3e-13 Score=148.41 Aligned_cols=168 Identities=17% Similarity=0.157 Sum_probs=119.6
Q ss_pred CCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCccc
Q psy1088 135 RGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAW 214 (905)
Q Consensus 135 ~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~ 214 (905)
..+++...+|+.+.|+++|+.+..|||..--| ...|+....
T Consensus 209 dy~~~p~~pTvld~l~~aG~~V~~VGki~DiF-------~g~Glt~a~-------------------------------- 249 (381)
T TIGR01696 209 DYALKPFAPTVLQKLKDEGHDVISIGKIADIY-------DGEGITKKV-------------------------------- 249 (381)
T ss_pred CCCCCCCCCCHHHHHHHCCCeEEEEccHHhEe-------cCCCccccc--------------------------------
Confidence 35566667899999999999999999852111 122322211
Q ss_pred ccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHH
Q psy1088 215 DLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGK 294 (905)
Q Consensus 215 ~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ 294 (905)
........++.+++.|++ +.+-|+|+++.++.. .+.|.. ....|..++..+|.+|++
T Consensus 250 ---~~~~~~~~~~~~l~aL~~---~~~~lif~nl~d~D~---------------~~GH~~--d~~~y~~ale~vD~~Lg~ 306 (381)
T TIGR01696 250 ---RTTSNMDGMDATIKEMKE---DFTGISFTNLVDFDA---------------LWGHRR--DVAGYAAALELFDRRLPE 306 (381)
T ss_pred ---CCCCHHHHHHHHHHHHhc---CCCCEEEEEeCCCcc---------------ccCCCC--CHHHHHHHHHHHHHHHHH
Confidence 112345567788888864 345699999888774 123322 356799999999999999
Q ss_pred HHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHH
Q psy1088 295 VVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLP 374 (905)
Q Consensus 295 ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~P 374 (905)
|++.|+ +||+||||||||...... +..++ .-+|||||++|++. ++......+++.||+|
T Consensus 307 ll~~L~-----~~tllIITADHG~Dp~~~-----------~t~HT----re~VPlIi~gp~i~-~g~~l~~~~slaDIap 365 (381)
T TIGR01696 307 LFSLLR-----EDDLLIITADHGNDPTWT-----------GTDHT----REYIPVLVYSPKVK-PGHSLGHRETFADIGA 365 (381)
T ss_pred HHHHhc-----cCCEEEEECCCCCCCCCC-----------CCcCC----CCCEeEEEEECCCC-CCceeCCCCEehhHHH
Confidence 999996 588999999999832110 01111 12899999999964 4656688899999999
Q ss_pred HHHHHhCCCCCC
Q psy1088 375 TLLSAANKSDIP 386 (905)
Q Consensus 375 TLl~laGi~~~P 386 (905)
|||+++|++ .|
T Consensus 366 TIldllGv~-~p 376 (381)
T TIGR01696 366 TIADNFGTS-DP 376 (381)
T ss_pred HHHHHcCcC-CC
Confidence 999999998 55
No 24
>PRK12383 putative mutase; Provisional
Probab=99.46 E-value=1.2e-12 Score=146.29 Aligned_cols=174 Identities=18% Similarity=0.138 Sum_probs=121.8
Q ss_pred CCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccc
Q psy1088 136 GGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWD 215 (905)
Q Consensus 136 ~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~ 215 (905)
.+++.. +++++.++++|+++++|||..--+ ...|...+..
T Consensus 228 y~~~p~-~~v~~~l~~~G~~v~~VGKi~Di~-------s~~G~t~~~~-------------------------------- 267 (406)
T PRK12383 228 YGVDPK-VQVPQKLYEAGVPVVLVGKVADIV-------NNPYGVSWQN-------------------------------- 267 (406)
T ss_pred CCCCCc-chhhhHHHHcCCCEEEEEEhHHee-------ccCCcccccc--------------------------------
Confidence 455555 899999999999999999853111 1112211110
Q ss_pred cCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHH
Q psy1088 216 LHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKV 295 (905)
Q Consensus 216 ~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~l 295 (905)
...+...++.+++.|++ +.+-|+|+++.++.. +.|..+ ...|.+++..+|..|++|
T Consensus 268 ---~~~t~~~~~~~l~aL~~---~~~dlvfvnl~~~D~----------------~GH~~d--~~~y~~aiE~iD~~lg~l 323 (406)
T PRK12383 268 ---LVDTQRVMDITLDEFNT---HPTAFICTNIQETDL----------------AGHAED--VARYAERLEVVDRNLARL 323 (406)
T ss_pred ---cCCHHHHHHHHHHHHhc---CCCCEEEEeccCCcc----------------ccccCC--HHHHHHHHHHHHHHHHHH
Confidence 12344667788888864 345699999888765 334333 367999999999999999
Q ss_pred HHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHH
Q psy1088 296 VEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPT 375 (905)
Q Consensus 296 l~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PT 375 (905)
+++|+ ++|+||||||||...... +... ...+||+||++|+..+ . ......++.||+||
T Consensus 324 l~~L~-----~~~lliITaDHG~d~~~~-----------~t~H----Tre~VPlLi~gp~i~~-~-~lg~~~slaDIapT 381 (406)
T PRK12383 324 LEAMT-----PDDCLVVMADHGNDPTIG-----------HSHH----TREVVPLLVYQKGLQA-T-QLGVRTTLSDVGAT 381 (406)
T ss_pred HHHhc-----cCCEEEEEcCCCCCCCCC-----------CcCC----CCcceEEEEEECCccc-c-cCCCCcEEhhHHHH
Confidence 99997 489999999999743110 0001 1358999999999753 2 23456899999999
Q ss_pred HHHHhCCCCCCCccccccccccccc
Q psy1088 376 LLSAANKSDIPNYVNSTVENIIPRY 400 (905)
Q Consensus 376 Ll~laGi~~~P~~~~g~g~sl~p~~ 400 (905)
|++++|++ .| . .|+|+++.+
T Consensus 382 Il~~~Gv~-~p--~--~G~Sfl~~L 401 (406)
T PRK12383 382 VCEFFGAP-PP--Q--NGRSFLSSL 401 (406)
T ss_pred HHHHcCCC-CC--C--CCCcHHHHh
Confidence 99999998 66 2 468887754
No 25
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=99.44 E-value=4e-12 Score=144.37 Aligned_cols=92 Identities=21% Similarity=0.324 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcC-CCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeE
Q psy1088 284 ILHKLDESVGKVVEALEQRRMLSNSIIVFVSD-NGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIV 362 (905)
Q Consensus 284 ~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSD-HG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v 362 (905)
.|...|..||+||++|++.++++|||||||+| ||+.. + +.+.| |.+.|++++|||+||.+|+. ++|.+
T Consensus 364 ~v~~gD~~vg~vl~aL~~~p~w~NTlII~T~DENGG~~-D-----hv~pP----k~~~~ggG~RVP~IVisP~~-k~G~v 432 (483)
T TIGR03397 364 DVAAGDRHIADVIAHLQKSPQWKNMVVIVTYDENGGFW-D-----HVAPP----KGDRWGPGTRIPAIVVSPFA-KKGYV 432 (483)
T ss_pred CHHHHHHHHHHHHHHHHhCccccCcEEEEEEECCCCcC-c-----CCCCC----CcCCCCCccEEEEEEEECCC-CCCcE
Confidence 38899999999999999999999999999999 98633 1 22333 77899999999999999998 56899
Q ss_pred EecceEehhHHHHHHHHhCCCCCC
Q psy1088 363 AEQYVHVSDWLPTLLSAANKSDIP 386 (905)
Q Consensus 363 ~~~~vs~vDI~PTLl~laGi~~~P 386 (905)
++.+++++||+|||.+++|++.+|
T Consensus 433 ~~~~~dh~SiL~Tie~~~GL~~L~ 456 (483)
T TIGR03397 433 DHTPYDTTSILRFITRRFGLPPLP 456 (483)
T ss_pred eCceeeeehHHHHHHHHhCCCCcC
Confidence 999999999999999999999433
No 26
>PRK05434 phosphoglyceromutase; Provisional
Probab=99.42 E-value=2.2e-12 Score=148.71 Aligned_cols=136 Identities=16% Similarity=0.167 Sum_probs=100.2
Q ss_pred cccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy1088 220 YSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEAL 299 (905)
Q Consensus 220 ~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~L 299 (905)
......++.++++|++ +++.|+++++..+.. ..|..+ ...|..+|..+|.+||+|+++|
T Consensus 370 Ms~~e~~d~~i~~l~~---~~~Dfv~vnf~~~D~----------------vGHtg~--~~a~~~AIe~vD~~LGrll~aL 428 (507)
T PRK05434 370 MSAYEVTDKLVEAIES---GKYDFIILNFANPDM----------------VGHTGN--LEAAVKAVEAVDECLGRVVDAV 428 (507)
T ss_pred CcHHHHHHHHHHHHhc---cCCCEEEEEecCcch----------------hhcCCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 3456688999999974 578999999988866 223222 3578999999999999999999
Q ss_pred HHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHH
Q psy1088 300 EQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSA 379 (905)
Q Consensus 300 k~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~l 379 (905)
++.|. +||||||||....... .+.. +...++...+|||||++|+... ....+++||+||||++
T Consensus 429 k~~g~----ivIITADHGn~e~m~d--~~tg------~~~~~HT~~~VPlII~~p~~i~-----~~~~sL~DIaPTIL~L 491 (507)
T PRK05434 429 LKVGG----TLLITADHGNAEQMID--PETG------QPHTAHTTNPVPFILVGGKALR-----LEGGKLADIAPTILDL 491 (507)
T ss_pred HhCCC----EEEEEcCCCccccccc--CCCC------CcccCCCCeeeEEEEEECCccc-----CCCccHHHHHHHHHHH
Confidence 98876 8999999996431100 0111 1223455689999999997321 1357899999999999
Q ss_pred hCCCCCCCccccccccc
Q psy1088 380 ANKSDIPNYVNSTVENI 396 (905)
Q Consensus 380 aGi~~~P~~~~g~g~sl 396 (905)
+|++ .|..+.| +||
T Consensus 492 lGi~-~P~~m~G--~SL 505 (507)
T PRK05434 492 LGLE-QPAEMTG--KSL 505 (507)
T ss_pred hCcC-CCCCCCC--ccC
Confidence 9999 8877765 454
No 27
>COG1524 Uncharacterized proteins of the AP superfamily [General function prediction only]
Probab=99.24 E-value=4e-11 Score=139.89 Aligned_cols=74 Identities=20% Similarity=0.335 Sum_probs=62.4
Q ss_pred CCCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc--CCCChhhHHhhhcCCCCccCCCccccccC
Q psy1088 56 SSGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHNVLYG 132 (905)
Q Consensus 56 ~~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~~~~~ 132 (905)
...+..+|+|++|++|++.+... ...+|+|.+|+++|+.+..+.+ ++.|.|.+++|+||.+|..||+..|..+.
T Consensus 35 ~~~~~klvli~iDgl~~d~~~~~---~~~~p~l~~l~~~g~~~~~~~s~~Pt~T~p~~~tl~TG~~P~~hgi~~N~~~~ 110 (450)
T COG1524 35 PAPKKKLVLISIDGLRADVLDRK---AGILPFLSSLAENGVHVAELISVFPTTTRPRHTTLITGSYPDEHGIVGNILYD 110 (450)
T ss_pred CcchheEEEEEEeccChhhhhhh---ccCchhHHHHHhCCceeEEEecCCCccccccceeeecccCcchhccccccccC
Confidence 35678899999999999988653 3469999999999998777777 35555999999999999999999987654
No 28
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=99.19 E-value=6.3e-11 Score=127.12 Aligned_cols=126 Identities=17% Similarity=0.340 Sum_probs=90.5
Q ss_pred cccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy1088 220 YSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEAL 299 (905)
Q Consensus 220 ~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~L 299 (905)
+.+..+++.+++.|++ .++-|+++++..+.. ..|.. ....|..+|..+|+.|++|++++
T Consensus 123 ~~~~~~~~~~~~~l~~---~~~~~v~~~~~~~D~----------------~GH~~--~~~~~~~~ie~~D~~l~~l~~~~ 181 (252)
T PF01676_consen 123 MSAKEIAEAAIEALKK---DKYDFVFVHVKGTDE----------------AGHRG--DPEAYIEAIERIDRFLGRLLEAL 181 (252)
T ss_dssp TTHHHHHHHHHHHHHH---TTSSEEEEEEEHHHH----------------HHTTT---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhhhc---ccCCeEEEeecCcch----------------hhccC--CHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556678888988865 355699999887643 22222 34689999999999999999999
Q ss_pred HHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHH
Q psy1088 300 EQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSA 379 (905)
Q Consensus 300 k~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~l 379 (905)
+. +++++|+|||||....... .. ...-.||+++++|++.. .. ....-++.|++|||+++
T Consensus 182 ~~----~~~~liiTaDHg~~~~~~~------------~~---Ht~~~VPll~~g~~~~~-~~-~~~~~~~~di~~ti~~~ 240 (252)
T PF01676_consen 182 DK----EDDLLIITADHGNDETMGH------------TS---HTREPVPLLIYGPGVRG-DS-VGEFGELADIAPTILEL 240 (252)
T ss_dssp HH----TTEEEEEEESSBSTTTSBS------------SS----B-B-EEEEEECTTEEE--S-C-STSBCGHHHHHHHHH
T ss_pred hc----CCCEEEEECCCCCccccCC------------cC---CCCceEEEEEEeCCCcc-Cc-cCcCCEEehHHHHHHHH
Confidence 74 5799999999998762211 00 11236999999998753 22 24566889999999999
Q ss_pred hCCCCCCCc
Q psy1088 380 ANKSDIPNY 388 (905)
Q Consensus 380 aGi~~~P~~ 388 (905)
+|++ .|..
T Consensus 241 ~G~~-~~~~ 248 (252)
T PF01676_consen 241 LGLE-LPEE 248 (252)
T ss_dssp HTGG-HHTT
T ss_pred cCCC-chHh
Confidence 9998 5543
No 29
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=99.18 E-value=4.9e-10 Score=128.60 Aligned_cols=208 Identities=17% Similarity=0.174 Sum_probs=124.9
Q ss_pred CCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCC-CcCCchhHhhhhhccccccCCCcccccCCCc
Q psy1088 142 EKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQ-DYFDHSAEEMKMWGLDMRRDLEPAWDLHGKY 220 (905)
Q Consensus 142 ~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~-~y~~~~~~~~~~~g~d~~~~~~~~~~~~~~~ 220 (905)
..+|+++|.++|++..-+.-. .-|-....|++|+. ..|....+. -.........+++.....
T Consensus 341 ~ntLgevls~~Gl~QlriAET-------------EKyaHVTfFfNGG~e~~f~~e~e~----~i~ipsp~v~tyd~~PeM 403 (558)
T PLN02538 341 ERTSGEYLVANGVRTFACSET-------------VKFGHVTFFWNGNRSGYFNEKLEE----YVEIPSDNGIPFNVQPKM 403 (558)
T ss_pred CCCHHHHHHhCCCceEEeecc-------------cccceeEEeecCCccccCCCCCce----EEECCCCCCCCcccCCCC
Confidence 468999999999987666421 11222233333332 333210000 000111112334444456
Q ss_pred ccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy1088 221 STDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALE 300 (905)
Q Consensus 221 ~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk 300 (905)
+...+++.+++.|.+ ++.-|+++++..+.. ..|.. ....+..+|..+|.+||+|+++++
T Consensus 404 SA~eVtd~~i~~i~~---~~ydfi~vNfan~Dm----------------vGHtG--~~ea~ikAIE~vD~~Lg~Il~al~ 462 (558)
T PLN02538 404 KALEIAEKARDALLS---GKFDQVRVNLANGDM----------------VGHTG--DLEATIVACEAVDAAVKEILDAVE 462 (558)
T ss_pred CHHHHHHHHHHHHhc---CCCCEEEEeccCccc----------------ccCCC--CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999975 457799999988776 22322 346789999999999999999998
Q ss_pred HcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccC----CCeeeeeEeeCCCCcCCCeEEe--cceEehhHHH
Q psy1088 301 QRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWE----GGVRGAGLIWSPLLESRGIVAE--QYVHVSDWLP 374 (905)
Q Consensus 301 ~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e----~~~rVPliI~~Pg~~~~g~v~~--~~vs~vDI~P 374 (905)
+.| .++|+|+|||-.-.-.... +.+.|..+..++++. -.-.||+||.+|+..+.-.... ..-++.||+|
T Consensus 463 ~~g----~~liITADHGNaE~M~d~~-~~G~p~~~~~Gtp~~~t~HT~npVP~Ii~g~~~~~~~~l~~~l~~~gLaDVAp 537 (558)
T PLN02538 463 QVG----GIYLVTADHGNAEDMVKRD-KSGKPLLDKDGNPQILTSHTLAPVPVAIGGPGLPPGVRFRDDLPTAGLANVAA 537 (558)
T ss_pred hcC----CEEEEeCCCCCchhhcccc-ccCCccccccCCCCCCCCCCCCCcCEEEEeCCcccCcccccCccCCcHHhHHH
Confidence 764 7899999999431100000 011111111111100 1235999999998643111111 1124999999
Q ss_pred HHHHHhCCCCCCCcccccc
Q psy1088 375 TLLSAANKSDIPNYVNSTV 393 (905)
Q Consensus 375 TLl~laGi~~~P~~~~g~g 393 (905)
|||+++|++ .|..|.|++
T Consensus 538 TIL~lLGl~-~P~emt~sl 555 (558)
T PLN02538 538 TVMNLHGFE-APADYEPSL 555 (558)
T ss_pred HHHHHhCCC-CchhcCcch
Confidence 999999999 898888854
No 30
>KOG2125|consensus
Probab=99.08 E-value=3e-10 Score=129.99 Aligned_cols=260 Identities=18% Similarity=0.177 Sum_probs=151.7
Q ss_pred CCCCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhC-cccccccc--CCCChhhHHhhhcCCCCccCCCccccccCC
Q psy1088 57 SGPPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSG-IILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHNVLYGC 133 (905)
Q Consensus 57 ~~~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~G-v~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~~~~~~ 133 (905)
...+.+|++++|.+|.|.+. +....||+-..++.+| ...-.+|+ +++|.|-.-|+.||..|..-.+.-|.....
T Consensus 48 ~~~~~lvf~viDalr~dF~~---~s~~smp~t~s~~~~~~a~g~~a~A~~PTVTmPRLka~tTGtlp~FidvllNva~~~ 124 (760)
T KOG2125|consen 48 PEKDRLVFVVIDALRADFLF---SSKESMPFTQSLLANGDAKGYHAFARPPTVTMPRLKAITTGTLPSFIDVLLNVATQE 124 (760)
T ss_pred cccceEEEEEhhhhhhhccc---cCCCCCccHHHHHhcCCceeeecccCCCcccchhhhhhhcCCCccHHHHHHhhhhHh
Confidence 35678999999999998774 2367899988766533 44444565 577779999999999998655544432111
Q ss_pred CCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCC----CCccccccccccCCCCcCCchhHhhhhhccccccC
Q psy1088 134 ERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPT----FRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRD 209 (905)
Q Consensus 134 ~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~----~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~ 209 (905)
. ....+-..+.+.|-+.++.|.=. + -.-+|. ..|-++|+- .||.+-.. +
T Consensus 125 ---~---~~d~wl~q~~~~n~kv~f~GDdT--W--LkLfPs~f~~f~g~~SFfV-----sDyt~vDn------------N 177 (760)
T KOG2125|consen 125 ---L---LDDNWLGQFFQINKKVHFNGDDT--W--LKLFPSEFLRFEGVTSFFV-----SDYTDVDN------------N 177 (760)
T ss_pred ---h---cccHHHHHHHHhCcEEEEccchH--H--HHHhhHHHHhccCcceEEe-----hhhhhhhh------------h
Confidence 0 11236778888899988876410 0 001111 111111110 11111000 0
Q ss_pred CCcccccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHH
Q psy1088 210 LEPAWDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLD 289 (905)
Q Consensus 210 ~~~~~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD 289 (905)
. .....+ ++... ++=-.+-+|+.+..+ ..|........-.+.+.++|
T Consensus 178 --V----Tr~L~~----------l~~~~-~~Wd~lILHYLGlDH----------------IGH~~G~~Sp~vp~KLkEmD 224 (760)
T KOG2125|consen 178 --V----TRHLPT----------LELNS-SDWDLLILHYLGLDH----------------IGHVLGPSSPLVPAKLKEMD 224 (760)
T ss_pred --h----hhcCCc----------hhhhh-cchhHHHHHHhccce----------------eccccCCcchhhhHHHHHHH
Confidence 0 000000 00000 000011122222211 12222223334557789999
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCC--CeEEecce
Q psy1088 290 ESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESR--GIVAEQYV 367 (905)
Q Consensus 290 ~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~--g~v~~~~v 367 (905)
+-|++|.+++++..-.++|++|+++|||....|. |.+. -.+.+++|++++.|...-. .......+
T Consensus 225 eiv~~I~~~~~~~~s~d~tllil~gDHGM~e~Gn------------HGGs-s~~ET~s~l~~~~~N~~~~d~~~a~~~rv 291 (760)
T KOG2125|consen 225 EIVKRIHDYLMEHRSGDQTLLILCGDHGMTESGN------------HGGS-SPGETSSPLLFLLPNSNISDWLAAGLERV 291 (760)
T ss_pred HHHHHHHHHHhhcCCCCceEEEEEccccccccCC------------CCCC-CcccccccEEEEecCCCCcccchhccchh
Confidence 9999999999998888899999999999986432 1222 2345789999999841100 01123468
Q ss_pred EehhHHHHHHHHhCCCCCCCcccccc
Q psy1088 368 HVSDWLPTLLSAANKSDIPNYVNSTV 393 (905)
Q Consensus 368 s~vDI~PTLl~laGi~~~P~~~~g~g 393 (905)
.++|++|||+.++|++ +|..-.|..
T Consensus 292 ~QiDl~pTI~~llgvp-IP~~nvG~~ 316 (760)
T KOG2125|consen 292 EQIDLAPTIALLLGVP-IPKGNVGIL 316 (760)
T ss_pred hhhhhHHHHHHHhCCC-ccCCCccee
Confidence 8999999999999999 888766633
No 31
>PRK10518 alkaline phosphatase; Provisional
Probab=98.94 E-value=4e-08 Score=112.26 Aligned_cols=134 Identities=16% Similarity=0.198 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1088 223 DVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQR 302 (905)
Q Consensus 223 ~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~ 302 (905)
..+++.|+++|++. ++.|||++--....+. .|..+ -..-...+..+|++|+..++..++.
T Consensus 327 aeMT~kAI~~Lskn--~~GFFLmVEGg~ID~a----------------~H~nd--a~~~i~E~~~fD~AV~~A~~~~~~~ 386 (476)
T PRK10518 327 AQMTDKAIDLLKKN--EKGFFLQVEGASIDKQ----------------DHAAN--PCGQIGETVDLDEAVQKALEFARKD 386 (476)
T ss_pred HHHHHHHHHHhccC--CCceEEEeeccccchh----------------hccCC--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45799999999753 6899999986655441 11111 1233456778999999999999976
Q ss_pred CCCCCEEEEEEcCCCCCCcCCCCCCCC-----------Ccccc-----CCCCcccCCCeeeeeEeeCCCCcCCCeEEecc
Q psy1088 303 RMLSNSIIVFVSDNGGAAAGFNLNAAS-----------NWPLR-----GVKNTLWEGGVRGAGLIWSPLLESRGIVAEQY 366 (905)
Q Consensus 303 Gl~dnTlIIftSDHG~~~~g~~~~~gs-----------n~plr-----g~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~ 366 (905)
+ |||||+|+||+....-.+...+. ..|+. |...+--..+.-||++.++|+-. .....
T Consensus 387 ~---dTLVIVTADH~h~~~i~g~~~~~~g~~~~~~~~dg~~~~l~y~~g~g~s~~HtG~dV~v~A~GP~A~----~f~G~ 459 (476)
T PRK10518 387 G---NTLVIVTADHAHSSQIIAPDAKAPGLTQALNTKDGAVMVVSYGNSEEDSQEHTGTQLRIAAYGPHAA----NVVGL 459 (476)
T ss_pred C---CeEEEEEccCCCcceecCCCCCCCCcccccccCCCCeeEEEeccCCCCCcCcCCceeEEEecCCccc----ccccc
Confidence 4 99999999999877211100000 01100 00012233567799999999863 34678
Q ss_pred eEehhHHHHHHHHhCCC
Q psy1088 367 VHVSDWLPTLLSAANKS 383 (905)
Q Consensus 367 vs~vDI~PTLl~laGi~ 383 (905)
+.+.||+-+|..++|+.
T Consensus 460 ~eqt~if~~m~~Al~~~ 476 (476)
T PRK10518 460 TDQTDLFYTMKDALGLK 476 (476)
T ss_pred eeccHHHHHHHHHhCCC
Confidence 88999999999999863
No 32
>KOG2126|consensus
Probab=98.93 E-value=4.4e-09 Score=123.75 Aligned_cols=258 Identities=17% Similarity=0.223 Sum_probs=157.2
Q ss_pred EEEEEecCCCCCcccCCCCCC-----C-CCchHHHHHHhCcccccccc-CCCChhhHH-hhhcCCCCccCCCccccccCC
Q psy1088 62 IIFILADDLGWNDVGFHGLDQ-----I-PTPNIDALAYSGIILKNYYT-VQLCTPSRS-AIMTGKHPIHTGMQHNVLYGC 133 (905)
Q Consensus 62 IVlI~~D~lr~d~l~~~G~~~-----~-~TPnLd~LA~~Gv~f~~~ys-~~~~tPSra-sllTG~yP~~~Gi~~~~~~~~ 133 (905)
||++++|.+|+|.+=++.++. . ..=++..+-.++.....+.+ +|.||=.|- .|.||..|..--+..|.
T Consensus 61 vvilliDaLrydf~ip~~~~~~y~n~~~~l~~~~~l~~~~~~l~~f~ADpPTTTlQRLKGLTTGsLPTFID~GsNF---- 136 (895)
T KOG2126|consen 61 VVILLIDALRYDFLIPINSPLPYHNRGTILQELKHLNKSKAFLAKFIADPPTTTLQRLKGLTTGSLPTFIDIGSNF---- 136 (895)
T ss_pred eEEEEeehhhhccccccCCCchhhhcchhHHHHHhhCcchhHHHHHhcCCCccHHHHhhccccCCCccceeccccC----
Confidence 999999999999665544211 1 11123333445666677778 677776554 78899999876665553
Q ss_pred CCCCCCCCCCcHHHHHHHcCCeeeeecc--ccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCC
Q psy1088 134 ERGGLPLSEKILPQYLKELGYRTRIVGK--WHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLE 211 (905)
Q Consensus 134 ~~~~l~~~~~tL~e~Lk~~GY~T~~~Gk--wh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~ 211 (905)
.+-...+..+...+..+|-...++|. |..-+ |. -|...+.+. -| +.+++
T Consensus 137 --~g~~I~EDNfv~Ql~~~gk~vvflGDdTW~~LF------p~--~f~~s~s~p-----Sf-------nv~DL------- 187 (895)
T KOG2126|consen 137 --AGPAIAEDNFVRQLVLNGKSVVFLGDDTWTSLF------PN--QFNKSYSFP-----SF-------NVHDL------- 187 (895)
T ss_pred --CCcccchhHHHHHHHHCCCeEEEecCccHHHhC------hH--hhcCCCCCC-----CC-------CCccc-------
Confidence 12334677888999999999999885 21111 10 011111000 00 00111
Q ss_pred cccccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHH
Q psy1088 212 PAWDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDES 291 (905)
Q Consensus 212 ~~~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~ 291 (905)
...|+.+.+...+.++.. .=-.+.-|+.++++ .+|+.++.....+.-+..+|+.
T Consensus 188 -------dtVDn~v~~~if~~l~s~---dwdVlIAHfLGVDH----------------~GHk~GPdH~~M~~KL~qmD~v 241 (895)
T KOG2126|consen 188 -------DTVDNGVIEKIFKSLNSK---DWDVLIAHFLGVDH----------------CGHKHGPDHPEMADKLVQMDRV 241 (895)
T ss_pred -------cccchHHHHHhhhhhccC---chHHHHHHHhCccc----------------ccccCCCCCHHHHHHHHHHHHH
Confidence 113444455554444421 11122233444444 3444444556778889999999
Q ss_pred HHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCc----CCCeEEecce
Q psy1088 292 VGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLE----SRGIVAEQYV 367 (905)
Q Consensus 292 VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~----~~g~v~~~~v 367 (905)
|+++++.++ |||+.|++||||+...|.+ +.-.+..++.-++++++... +++. ..+..
T Consensus 242 I~~ii~~md-----edTlLvVmGDHGMt~nGdH-------------GGdS~dEv~a~lf~ySKk~~f~~lp~~~-~~~~~ 302 (895)
T KOG2126|consen 242 INEIIKKMD-----EDTLLVVMGDHGMTDNGDH-------------GGDSEDEVEATLFAYSKKHRFALLPPEN-KVESI 302 (895)
T ss_pred HHHHHHHhc-----cCeeEEEecCCCCCCCCCC-------------CCccHHHhhhheeEEecCccccCCCCCC-Cccce
Confidence 999999998 8999999999999874422 22234457778888876432 1111 13458
Q ss_pred EehhHHHHHHHHhCCCCCCCcccccc-ccccc
Q psy1088 368 HVSDWLPTLLSAANKSDIPNYVNSTV-ENIIP 398 (905)
Q Consensus 368 s~vDI~PTLl~laGi~~~P~~~~g~g-~sl~p 398 (905)
.++|+.||+.-++|+| +|-.-.|.. -+++|
T Consensus 303 ~QIDLVptlalllGlP-IPf~NlG~vi~ei~~ 333 (895)
T KOG2126|consen 303 EQIDLVPTLALLLGLP-IPFSNLGEVIYEIFP 333 (895)
T ss_pred eeehhHhHHHHHhCCC-CCccccccccccccc
Confidence 9999999999999999 887766633 34444
No 33
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=98.80 E-value=9.5e-08 Score=102.98 Aligned_cols=165 Identities=16% Similarity=0.148 Sum_probs=115.3
Q ss_pred CCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccc
Q psy1088 136 GGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWD 215 (905)
Q Consensus 136 ~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~ 215 (905)
.++....+|+.+.|+++|..|+.|||..--+ ...|+....
T Consensus 220 ya~~P~~~tvl~~L~e~g~~vi~IGKI~DI~-------~~~Git~~~--------------------------------- 259 (397)
T COG1015 220 YAVKPFAPTVLDKLKEAGRPVIAIGKIADIY-------AGQGITEKV--------------------------------- 259 (397)
T ss_pred cccCCChhhHHHHHHHcCCceEEEeeHHhhh-------ccccccccc---------------------------------
Confidence 4455567899999999999999999842111 122332211
Q ss_pred cCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHH
Q psy1088 216 LHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKV 295 (905)
Q Consensus 216 ~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~l 295 (905)
....+....+..++.++.+..+ -|+|.++.+... .|.|..+ ..-|++++...|..+.+|
T Consensus 260 --~~~~n~~~~d~tl~~~~~~~~~--~~vFtNlVdfD~---------------~yGHRrD--v~gYa~aLe~FD~rL~e~ 318 (397)
T COG1015 260 --KAVSNMDGMDVTLEEMKTAEFN--GLVFTNLVDFDS---------------LYGHRRD--VAGYAAALEEFDRRLPEL 318 (397)
T ss_pred --cCCCcHHHHHHHHHHHhcCCCC--cEEEEeeeeccc---------------ccccccc--hHHHHHHHHHHHHHHHHH
Confidence 0123456678888888865323 567777776654 2444433 357999999999999999
Q ss_pred HHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHH
Q psy1088 296 VEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPT 375 (905)
Q Consensus 296 l~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PT 375 (905)
++.|+ ++-++|+|+|||.-..-.+ ..++ .-+||+|+++|++++. . .-..-+..||..|
T Consensus 319 ~~~l~-----edDlLiiTADHGnDPT~~g-----------TdHT----RE~iPvl~y~~~~k~~-~-lg~r~tfADiGaT 376 (397)
T COG1015 319 IENLR-----EDDLLIITADHGNDPTWGG-----------TDHT----REYIPVLVYGPGLKPG-S-LGTRETFADIGAT 376 (397)
T ss_pred HHhcC-----CCCEEEEecCCCCCCCCCC-----------CCcc----ccccceEEEcCCccCC-c-ccccccHHHHHHH
Confidence 99987 6789999999997652111 1111 1359999999999763 3 2445678999999
Q ss_pred HHHHhCCC
Q psy1088 376 LLSAANKS 383 (905)
Q Consensus 376 Ll~laGi~ 383 (905)
+++.+|++
T Consensus 377 vA~~fgv~ 384 (397)
T COG1015 377 VADNFGVS 384 (397)
T ss_pred HHHHhCCC
Confidence 99999998
No 34
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=98.73 E-value=3.1e-08 Score=107.30 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=73.7
Q ss_pred CeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCccccccc-cCCCChhhHHhhhcCCCCccCCCccccccCCCC---
Q psy1088 60 PHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYY-TVQLCTPSRSAIMTGKHPIHTGMQHNVLYGCER--- 135 (905)
Q Consensus 60 PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~y-s~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~--- 135 (905)
..++||.+|+..+.-+..+ +..+|||..|+++|+.=.--- .+|.|.|.+++|+||..|..+|+.+....-...
T Consensus 4 ~K~~liGlDgvp~sl~~~f---~~~lpnl~~Lm~~~s~G~l~S~iPpIT~~~W~sl~TG~~PGe~GiygF~~Rkg~sy~~ 80 (471)
T COG3379 4 RKTLLIGLDGVPPSLFRQF---RDNLPNLNKLMKNGSFGKLESGIPPITPAAWPSLFTGYNPGETGIYGFRHRKGNSYSE 80 (471)
T ss_pred ceEEEEEeCCCCHHHHHHH---hhhhhHHHHHHHhcccccccccCCCcchhhHHHHhhccCCccccceeeecccCCccCc
Confidence 3689999999987444333 456999999999986533222 278999999999999999999998854322211
Q ss_pred ----CCCCCCCCcHHHHHHHcCCeeeeecc
Q psy1088 136 ----GGLPLSEKILPQYLKELGYRTRIVGK 161 (905)
Q Consensus 136 ----~~l~~~~~tL~e~Lk~~GY~T~~~Gk 161 (905)
..-......+.+.|.+.|++...+|-
T Consensus 81 ~yva~Ss~vk~~~iWD~L~~kG~k~~V~~v 110 (471)
T COG3379 81 PYVAHSSTVKEDPIWDLLGKKGKKSVVAGV 110 (471)
T ss_pred eecccccccccccHHHHHhhcCceEEEEeC
Confidence 11224678899999999999998873
No 35
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3.1.4.3 from EC) and eukaryotic acid phosphatases 3.1.3.2 from EC.; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 2D1G_B.
Probab=98.67 E-value=2.9e-07 Score=104.79 Aligned_cols=259 Identities=18% Similarity=0.176 Sum_probs=118.0
Q ss_pred CCcccCCCCCCCCCchHHHHHHhCcccccccc--CCCChhhHHhhhcCCCCccCCCccccccCCCCCCCCCCCCcHHHHH
Q psy1088 72 WNDVGFHGLDQIPTPNIDALAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCERGGLPLSEKILPQYL 149 (905)
Q Consensus 72 ~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~~~l~~~~~tL~e~L 149 (905)
...|++|+ ...+|++.+||++.++++|+|+ ...|.|.|..+++|... |...+..........+...+||++.|
T Consensus 112 ~~~M~~y~--~~~~P~~~~LA~~f~l~Dnyf~s~~~pS~PNr~~l~sG~~~---~~~~~~~~~~~~~~~~~~~~ti~d~L 186 (376)
T PF04185_consen 112 GQVMGYYT--PADLPFLWALADQFTLCDNYFCSVPGPSQPNRLYLISGTSD---GVGNNGNPFIDNPSPPFSWPTIFDRL 186 (376)
T ss_dssp TGGGEE----TTTSHHHHHHHHHSEEESSEE-SSSS-HHHHHHHHHHS------TT-STS-TTS-EEES------HHHHH
T ss_pred CccceeeC--CCCChHHHHHHhheEEecccccCCCCCCCCCceEEEeeccC---ccccCCCCceecCCCCcccccHHHHH
Confidence 34555555 5679999999999999999995 35566999999999862 22111000000000234678999999
Q ss_pred HHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccccCCCcccHHHHHHH
Q psy1088 150 KELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWDLHGKYSTDVFTAEA 229 (905)
Q Consensus 150 k~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~d~~~~d~a 229 (905)
.++|..=..++..-. ........++...... +..... ....+ .. . .........+.-..|.
T Consensus 187 ~~aGisW~~Y~e~~~----~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~--~~-~-~~~~~~~~~~~~~~f~--- 247 (376)
T PF04185_consen 187 SAAGISWKWYQEGYP----NPGDNGLAGFDPYFDY-------FYQPFN-PPSFG--SY-S-PNPDRANHIVPLSQFY--- 247 (376)
T ss_dssp HHHT--EEEEETT-S-----SEEETTEEE---EEE--------TTS-E---S-G--GG-T-TSBSTTTTEEECHHHH---
T ss_pred HHcCCceEeCeecCC----ccCcccccccccchhh-------hhcccc-ccccc--cc-c-cccccccccchHHHHH---
Confidence 999986554432100 0000000111111100 000000 00000 00 0 0000000111112222
Q ss_pred HHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEE
Q psy1088 230 VDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSI 309 (905)
Q Consensus 230 ~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTl 309 (905)
+-+++ ..-|-|.|+.....|...+ + .+.++.-|..|++++++|.....|++|+
T Consensus 248 -~d~~~--g~LP~~sfI~p~~~~d~Hp--~----------------------~~~~~~gd~~l~~vv~ai~~sp~W~~T~ 300 (376)
T PF04185_consen 248 -ADLAN--GTLPQVSFIEPNMCNDMHP--P----------------------YSVIADGDAFLARVVEAIRNSPYWKNTA 300 (376)
T ss_dssp -HHHHT--T---SEEEEE--GGGS--T--T----------------------T--HHHHHHHHHHHHHHHHCSTTGGGEE
T ss_pred -HHHHc--CCCCceEEEEecCcCCCCC--C----------------------CCchhHHHHHHHHHHHHHhcCcCcCCeE
Confidence 22222 2568888887644443000 0 1235789999999999999999999999
Q ss_pred EEEEcCCCCCCcCCCCCCCCCcc----ccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHHhCCC
Q psy1088 310 IVFVSDNGGAAAGFNLNAASNWP----LRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 310 IIftSDHG~~~~g~~~~~gsn~p----lrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~laGi~ 383 (905)
||||=|-++.+..|-.......+ ..|. ...+--|.|||+||.+|-.+ .|.+.....++.-|+-||-+++|++
T Consensus 301 iiIt~DE~gG~~DHV~pp~~~~~~~~~~~g~-~~~~g~G~RVP~ivISP~~k-~G~v~~~~ydh~Silrtie~~~gLP 376 (376)
T PF04185_consen 301 IIITYDENGGFYDHVPPPRSPVPNPDEWVGP-FGFDGLGPRVPAIVISPYAK-GGTVDHTPYDHTSILRTIEERFGLP 376 (376)
T ss_dssp EEEEES--TT----------TTTT------S-TT------B--EEEESTTB--TTEEE---EETHHHHHHHHHHHT--
T ss_pred EEEEEecCCCcCCCCCCCCCCcccccccccc-CCCCCccccCCeEEeCCCCC-CCcEeCCccchhHHHHHHHHHhCCC
Confidence 99998876654333211111000 0011 23344589999999999875 5899999999999999999999985
No 36
>COG1785 PhoA Alkaline phosphatase [Inorganic ion transport and metabolism]
Probab=98.66 E-value=1.7e-06 Score=97.85 Aligned_cols=294 Identities=18% Similarity=0.177 Sum_probs=160.2
Q ss_pred cCCCCCeEEEEEecCCCCCcccCCCC--CCCCCch--HHHHHHh---CccccccccC--CCChhhHHhhhcCCCCccCCC
Q psy1088 55 ASSGPPHIIFILADDLGWNDVGFHGL--DQIPTPN--IDALAYS---GIILKNYYTV--QLCTPSRSAIMTGKHPIHTGM 125 (905)
Q Consensus 55 ~~~~~PNIVlI~~D~lr~d~l~~~G~--~~~~TPn--Ld~LA~~---Gv~f~~~ys~--~~~tPSrasllTG~yP~~~Gi 125 (905)
...+..|||+++.|+|++..++.+-+ .....|+ .+.+-.. |...++...+ +-+..+-+++-||.--....+
T Consensus 55 ~~~~~KNVI~~IgDGMG~s~vtaaR~~~~~~~~~~~~~~~~~~~~~~g~~~t~s~~~~vTDSAAaaTA~atGvKTyNgai 134 (482)
T COG1785 55 SAGKAKNVILLIGDGMGPSTVTAARSYKGGPNGPFKGIDTLPDTGLIGTYSTHSSDSNVTDSAAAATAFATGVKTYNGAI 134 (482)
T ss_pred ccccCceEEEEecCCCChHHHHHHHHhccCCCCccccccccccccccceeeccCCCCcccchhhhhhhhhhceeccCccc
Confidence 45678999999999999988876321 0111111 1112222 2233332222 333456667888875444222
Q ss_pred ccccccCCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCC----CCCCCC---------------ccc-cccccc
Q psy1088 126 QHNVLYGCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKE----YTPTFR---------------GFE-SHLGYW 185 (905)
Q Consensus 126 ~~~~~~~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~----~~p~~~---------------GFd-~~~g~~ 185 (905)
... .......|+.|+.+++||.|..|....+....+. +.+.+. |.+ ...-.+
T Consensus 135 gv~--------~~~~~~~TiLE~Ak~~GkaTGlVtTtriThATPAAf~AHv~~R~~~~~ia~~~~~~~~~~~~~~~DVll 206 (482)
T COG1785 135 GVD--------PNGKPLKTILELAKEAGKATGLVTTTRITHATPAAFAAHVTSRDDEDEIATQQICPGNAGRNDKVDVLL 206 (482)
T ss_pred ccC--------CCCcccchHHHHHHHhCcccceEEeeeccccChHHHHHhcccccchhHHHHHhhccccccccCCCCEEe
Confidence 111 1223578999999999999999976444332211 111111 111 111123
Q ss_pred cCCCCcCCchh-------------Hhhhhhcccccc----------------------CCCcccccCCC----cccHHHH
Q psy1088 186 TGHQDYFDHSA-------------EEMKMWGLDMRR----------------------DLEPAWDLHGK----YSTDVFT 226 (905)
Q Consensus 186 ~~~~~y~~~~~-------------~~~~~~g~d~~~----------------------~~~~~~~~~~~----~~d~~~~ 226 (905)
+|+..+|.+.. ......|+.+-. ......+.... =.-..++
T Consensus 207 GGG~~~F~p~~~~g~~r~d~~~l~~~~~~~GY~~V~~~~el~a~~~~~~klLGLFa~~~~~~~~DR~~~~~~~PsLaeMt 286 (482)
T COG1785 207 GGGRKYFLPKATAGGRRDDGRDLIEEAKAAGYQYVETRAELNAVSNQDDKLLGLFADGHLPPNLDRDRDPNDEPSLAEMT 286 (482)
T ss_pred cCchhhccccccccccccCcHHHHHHHHhCCcEEeccHHHHHhhhccCCceEEeccCCCCCcccccCccccCCCcHHHHH
Confidence 44555554431 000011221110 01111111111 1224578
Q ss_pred HHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy1088 227 AEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLS 306 (905)
Q Consensus 227 d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~d 306 (905)
+.|++.|.+. .+.|||+|--....+. .|..+. ..-...+..+|++|...++..++. .
T Consensus 287 ~kAi~~L~kn--~~GFFLMVEGg~ID~a----------------~Hand~--~~~i~e~~~fd~Avq~al~fA~k~---~ 343 (482)
T COG1785 287 EKAIDLLSKN--KKGFFLMVEGGRIDWA----------------GHANDP--AGAIGETVAFDEAVQAALDFAEKD---G 343 (482)
T ss_pred HHHHHHhccC--CCceEEEEeccccchh----------------hcCcCH--HHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 9999988754 5899999987666551 111111 223456779999999999999987 6
Q ss_pred CEEEEEEcCCCCCC--cCC----CCC---------------------------CCCCccc--------------------
Q psy1088 307 NSIIVFVSDNGGAA--AGF----NLN---------------------------AASNWPL-------------------- 333 (905)
Q Consensus 307 nTlIIftSDHG~~~--~g~----~~~---------------------------~gsn~pl-------------------- 333 (905)
+||||+|+||-... .+. .+. .+..+.+
T Consensus 344 ~TLVIvTADH~tgg~~ig~~~~y~~~~~pi~~~~~t~~~~a~~~~~g~~~~~~~~~~~g~~~td~~~k~~~~~~~~~~~~ 423 (482)
T COG1785 344 NTLVIVTADHETGGLTIGRDGVYEWKPDPIKNAKHTGLGLAKKIADGAHLPDVYGNYTGIELTDETPKEIEEALNAPNSI 423 (482)
T ss_pred CeEEEEeccccCCceecCCCCccccCCCcccccccchhhHHHHhhcCCchhhhhcccccccccccchHHHHHhhcCCccc
Confidence 99999999996544 231 000 0000000
Q ss_pred -------c--C--CCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHHhCCC
Q psy1088 334 -------R--G--VKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 334 -------r--g--~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~laGi~ 383 (905)
. . +..+.-..+.-||++.++|+... ....+.++||+=+|..++++.
T Consensus 424 ~~~~~i~~~~~~~g~tt~~HtG~dVpi~A~Gpgae~----f~G~~DnTei~~~i~~al~~~ 480 (482)
T COG1785 424 DIIGAIISERALIGWTTHGHTGEDVPIFAYGPGAEN----FRGVMDNTEIFQAIAAALGLS 480 (482)
T ss_pred cccccceeeecccCCCCCCccCceeeeeeecCcccc----ccccccchHHHHHHHHHhccC
Confidence 0 0 00111123456999999998642 467889999999999999976
No 37
>KOG2124|consensus
Probab=98.65 E-value=1.1e-07 Score=112.04 Aligned_cols=260 Identities=13% Similarity=0.117 Sum_probs=155.2
Q ss_pred CeEEEEEecCCCCCcccCCCCCCCCCchHHHHHH-hCcccccccc-CCCChhhHHhhhcCCCCccCCCccccccCCCCCC
Q psy1088 60 PHIIFILADDLGWNDVGFHGLDQIPTPNIDALAY-SGIILKNYYT-VQLCTPSRSAIMTGKHPIHTGMQHNVLYGCERGG 137 (905)
Q Consensus 60 PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~-~Gv~f~~~ys-~~~~tPSrasllTG~yP~~~Gi~~~~~~~~~~~~ 137 (905)
...|+++.|++|+|.+-.-... ...|+|..+.. +|..=-.+.. ++.+-|++.+|+.|-|.....+...-. .
T Consensus 44 ~RLvl~v~DGLRAd~~~~~~~~-s~ap~LR~ii~~qg~~GiS~tr~PTeSRpghvAliaGfyedpSAvtkgwk------~ 116 (883)
T KOG2124|consen 44 KRLVLFVGDGLRADTLFEPNCE-SRAPFLRSIILNQGTVGISHTRVPTESRPGHVALIAGFYEDPSAVTKGWK------S 116 (883)
T ss_pred HhEEEEcccccchhhhcCcccc-ccCCcHHHHHHhcCcccccccCCCCCCCCCcEEEEeccccChHHhhhhhh------c
Confidence 3689999999999866432221 47899988764 5555333443 566779999999999998766544211 1
Q ss_pred CCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccccC
Q psy1088 138 LPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWDLH 217 (905)
Q Consensus 138 l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~~~ 217 (905)
-|.++.++....+. |..+|.-|....-.. -..++-+. .|.+..+ ..+..
T Consensus 117 NPv~FDsvFN~S~~----t~~~gs~dil~~fs~--~~~~v~~~----------~y~~~~~---------------~~~~d 165 (883)
T KOG2124|consen 117 NPVNFDSVFNRSRH----TYSFGSPDILPMFSE--DLSHVDTP----------MYDHELE---------------DFDSD 165 (883)
T ss_pred CCchhhhhhhhhhh----hhcccCcccchhhhc--CCCccCcc----------ccchhHh---------------hcccc
Confidence 13344455544443 334433222110000 00011100 0111100 01113
Q ss_pred CCcccHHHHHHHHHHHHcC-----------CCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHH
Q psy1088 218 GKYSTDVFTAEAVDIIHNH-----------STDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILH 286 (905)
Q Consensus 218 ~~~~d~~~~d~a~~~I~~~-----------~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~ 286 (905)
+...|+++++...+++.+. .+.--||+++.-.++-. |...+....|...+.
T Consensus 166 ~~~lD~WvFd~~~~l~~~~~~~~~L~~~~~~~kvVfflhLlg~dt~g------------------H~~~P~s~~y~~nl~ 227 (883)
T KOG2124|consen 166 AIELDEWVFDRVDDLLHNSTNDQELRDLLHQDKIVFFLHLLGIDTAG------------------HAHRPYSVEYRENLK 227 (883)
T ss_pred ccccchhhhhhHHHHHhhhhcchhHHHhhccCceEEEEeecCcCccc------------------cccCCCcHHHHHHhh
Confidence 3445667777777766641 11123555554444111 111223366889999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeE----
Q psy1088 287 KLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIV---- 362 (905)
Q Consensus 287 ~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v---- 362 (905)
++|..|.++.+.+++-=-...|-.|||+|||....|. ++.-..+.+|.|++.||.|++.+...
T Consensus 228 ~~d~~i~~~y~l~e~~fnD~kTayi~TaDhgms~~gs-------------Hg~G~~~~~~TPlv~WGaGik~~~~n~~~~ 294 (883)
T KOG2124|consen 228 YTDKGIRELYDLFENYFNDGKTAYIFTADHGMSDFGS-------------HGDGHPENTRTPLVAWGAGIKYPVPNSEQN 294 (883)
T ss_pred cCCccHHHHHHHHHHHhcCCcceEEEehhcccccccc-------------cCCCCcccccChHHHhcCCCCccCCCCCcC
Confidence 9999999999999987667899999999999886332 22223678999999999988643211
Q ss_pred Ee---------cceEehhHHHHHHHHhCCCCCCCcc
Q psy1088 363 AE---------QYVHVSDWLPTLLSAANKSDIPNYV 389 (905)
Q Consensus 363 ~~---------~~vs~vDI~PTLl~laGi~~~P~~~ 389 (905)
.+ .-+.+.||+|-+-.+.|++ .|..-
T Consensus 295 ~~~~~~~~~~~~dl~Qa~IApLMS~LiGlp-~P~Ns 329 (883)
T KOG2124|consen 295 FDEYSLTEIKRHDLNQADIAPLMSYLIGLP-PPVNS 329 (883)
T ss_pred CccccccccchhhhhHHHHHHHHHHHhCCC-Ccccc
Confidence 11 2356899999999999999 56543
No 38
>KOG4513|consensus
Probab=98.58 E-value=9.5e-07 Score=94.55 Aligned_cols=196 Identities=21% Similarity=0.237 Sum_probs=116.2
Q ss_pred CCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccC-CCCcCCchhHhhhhhccccccCCCcccccCCCc
Q psy1088 142 EKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTG-HQDYFDHSAEEMKMWGLDMRRDLEPAWDLHGKY 220 (905)
Q Consensus 142 ~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~-~~~y~~~~~~~~~~~g~d~~~~~~~~~~~~~~~ 220 (905)
..|++++|...|.+|..+... .-|-....||+| ...||+.... ..+.......++.....
T Consensus 327 ~~tlaE~La~~gv~~fhcaEt-------------eK~aHVTfFfNGgre~~F~~ee~------v~iPSp~v~sfd~qP~M 387 (531)
T KOG4513|consen 327 DRTLAEYLAHNGVRTFHCAET-------------EKFAHVTFFFNGGREGYFNEEEY------VEIPSPSVISFDVQPKM 387 (531)
T ss_pred cchHHHHHHhcCcceeeeccc-------------ceeeeEEEEEcCCcccccCcceE------EEecCCCceeeecChhh
Confidence 359999999999999876421 122223334444 3455543110 01111111222222233
Q ss_pred ccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy1088 221 STDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALE 300 (905)
Q Consensus 221 ~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk 300 (905)
....+.+.|++.|+.- .-| |+.+++..+.. ..|..+ ...-..++...|.+||+|+++++
T Consensus 388 ~a~eva~ka~~~ie~G--~~p-~v~vNlappDM----------------VGHTG~--~EAtv~AcEatD~aig~Iy~A~~ 446 (531)
T KOG4513|consen 388 KALEVAEKARDAIESG--KFP-QVRVNLAPPDM----------------VGHTGD--IEATVVACEATDEAIGKIYDAIE 446 (531)
T ss_pred hHHHHHHHHHHHHHcC--CCC-eEEEcCCCccc----------------cCcccc--hhhhhhHHHHHHHHHHHHHHHHH
Confidence 4566788888888752 234 44455544433 112111 12334678899999999999999
Q ss_pred HcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEE---ecceEehhHHHHHH
Q psy1088 301 QRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVA---EQYVHVSDWLPTLL 377 (905)
Q Consensus 301 ~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~---~~~vs~vDI~PTLl 377 (905)
+.| .+.|+|+|||-.-.-.... |+|.+. .-.-+||++|-+||..+.-+.. +.--++.|++||+|
T Consensus 447 ~~~----y~lvvTADHGNAEkMv~~d--------gGk~ts-HT~~~VPl~i~~pg~~~g~~f~~~~dt~p~L~dVApTVl 513 (531)
T KOG4513|consen 447 QVG----YILVVTADHGNAEKMVKRD--------GGKLTS-HTLKPVPLAIGGPGLVKGVRFRGDVDTDPGLADVAPTVL 513 (531)
T ss_pred hcC----cEEEEEcCCCCHHHhccCC--------CCcccc-ccccccceEecCCccccceeeccccccCchhhhhhHHHH
Confidence 875 6888999999764221111 122222 2245799999999887632221 23346899999999
Q ss_pred HHhCCCCCCCcccc
Q psy1088 378 SAANKSDIPNYVNS 391 (905)
Q Consensus 378 ~laGi~~~P~~~~g 391 (905)
.+.|++ .|..+.|
T Consensus 514 ~imG~p-~PsEmtg 526 (531)
T KOG4513|consen 514 NIMGFP-APSEMTG 526 (531)
T ss_pred HHhCCC-Ccccccc
Confidence 999999 7776544
No 39
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=98.49 E-value=1.1e-06 Score=99.97 Aligned_cols=228 Identities=14% Similarity=0.218 Sum_probs=128.9
Q ss_pred CeEEEEEecCCCCCcccCC----CC-----CCCCCchHHHHHHhCcccccccc--CCCChhhHHhhhcCCCCccCCCccc
Q psy1088 60 PHIIFILADDLGWNDVGFH----GL-----DQIPTPNIDALAYSGIILKNYYT--VQLCTPSRSAIMTGKHPIHTGMQHN 128 (905)
Q Consensus 60 PNIVlI~~D~lr~d~l~~~----G~-----~~~~TPnLd~LA~~Gv~f~~~ys--~~~~tPSrasllTG~yP~~~Gi~~~ 128 (905)
+||||++.|+|+...+... +. .......++++-.-|+.-+.... .+-+.++-+|+.||.-... |..+.
T Consensus 1 KNVIl~IgDGMg~~~~taaR~~~~~~~~~~~~~~~l~~d~~p~~~l~~T~~~d~~vtDSAa~aTA~atG~KT~n-g~Igv 79 (419)
T smart00098 1 KNVILFIGDGMGVSTITAARILKGQAGGKLGEETLLAFDQFPTGALSKTYNPDYQVTDSAATATAYLCGVKTYN-GAIGV 79 (419)
T ss_pred CeEEEEEeCCCCHHHHHHHHHHhcccCCCCccccccchhhcceeeeeccCCCCCCCCcchhhheehhhcccccC-ceeee
Confidence 5999999999997766541 10 11234566766655543222221 2555678889999985543 33221
Q ss_pred cccCCCCCCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCC---CCCC---------------------------cc
Q psy1088 129 VLYGCERGGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYT---PTFR---------------------------GF 178 (905)
Q Consensus 129 ~~~~~~~~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~---p~~~---------------------------GF 178 (905)
.. . -.....||.+.++++|+.|.+|....+....+..+ -..| ++
T Consensus 80 d~-----~-~~~~~~tIle~Ak~~G~~tGiVTT~~ithATPAafyAH~~~R~~e~~~~i~~~~~~~~~~dIa~Ql~~~~~ 153 (419)
T smart00098 80 DA-----A-TGKEVPSVLEWAKKAGKSTGLVTTTRITHATPAATYAHVASRKWYNDADIPAEALENGCGDIARQLINNRI 153 (419)
T ss_pred cC-----C-CCCcchhHHHHHHHcCCcEEEEeCcccCCCcchhheeecccccccchhhhHHHHhhcCCccHHHHHhhcCC
Confidence 10 0 01246899999999999999997644433222111 1112 33
Q ss_pred ccccccccCCCCcCCchhH-------------h--hhhh---cccc-------cc--------------CCCccc--cc-
Q psy1088 179 ESHLGYWTGHQDYFDHSAE-------------E--MKMW---GLDM-------RR--------------DLEPAW--DL- 216 (905)
Q Consensus 179 d~~~g~~~~~~~y~~~~~~-------------~--~~~~---g~d~-------~~--------------~~~~~~--~~- 216 (905)
|.+ ++|+..+|.+... . ...| |+.+ .. ...-.+ +.
T Consensus 154 dVi---lGGG~~~F~p~~~~~~~~~~g~r~d~~nL~~~~~~~gy~~v~~~~~l~~~~~~~~~~llGLF~~~~l~y~~dr~ 230 (419)
T smart00098 154 DVL---LGGGRSYFAPTGTADPEGQRGTRRDGRNLIEEWKAAGYQYVWDRTELLAVGANKVDPLLGLFADGDMPYEIDRD 230 (419)
T ss_pred cEE---EeCCcccccccCCCccccccccccCCccHHHHHHHcCCEEECCHHHHhcccccccceeeeccCccCCCcccccC
Confidence 333 3344555522110 0 0001 1110 00 000000 00
Q ss_pred CCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHH
Q psy1088 217 HGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVV 296 (905)
Q Consensus 217 ~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll 296 (905)
...-.-..+++.|+++|++. ++.|||++--....+.. |..+ -..-...+..+|++|+..+
T Consensus 231 ~~~PsL~eMt~~Al~~L~~~--~~GFfLmVEgg~ID~a~----------------H~nd--~~~~i~E~~~fd~AV~~a~ 290 (419)
T smart00098 231 STEPSLAEMTEVAIRLLSKN--ERGFFLMVEGGRIDHAH----------------HEND--ACGALHETVDFDQAIQAAL 290 (419)
T ss_pred CCCCCHHHHHHHHHHHhhcC--CCceEEEEecccCChhh----------------ccCC--HHHHHHHHHHHHHHHHHHH
Confidence 01112356789999999753 68999999766554411 1111 1234556779999999999
Q ss_pred HHHHHcCCCCCEEEEEEcCCCCCC
Q psy1088 297 EALEQRRMLSNSIIVFVSDNGGAA 320 (905)
Q Consensus 297 ~~Lk~~Gl~dnTlIIftSDHG~~~ 320 (905)
+..++ .++||||+|+||+...
T Consensus 291 ~~~~~---~~dTLiiVTADH~~g~ 311 (419)
T smart00098 291 EFAKK---EDETLVIVTADHSHVG 311 (419)
T ss_pred HHhhC---CCCcEEEEEecCCCcc
Confidence 99987 5799999999998754
No 40
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=98.41 E-value=7.9e-07 Score=101.74 Aligned_cols=133 Identities=14% Similarity=0.194 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1088 223 DVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQR 302 (905)
Q Consensus 223 ~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~ 302 (905)
..+++.|+++|.+. +++|||++--..... ..|..+. ..-...+..+|++|+.+++..++.
T Consensus 240 ~eMt~~Al~~L~~~--~~GFfLmVEg~~ID~----------------a~H~nd~--~~~i~E~~~fD~AV~~a~~~~~~~ 299 (421)
T PF00245_consen 240 AEMTEKALEVLSKN--PKGFFLMVEGGRIDW----------------AGHANDA--ARAIEETLEFDDAVKVALDFAEKD 299 (421)
T ss_dssp HHHHHHHHHHHTTS--TT-EEEEEEETHHHH----------------HHHTT-H--HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC--CCCcEEEecccchhh----------------hhhhchH--HHHHHHHHHHHHHHHHHHHHhccC
Confidence 46799999999854 589999997544332 2222222 223456779999999999999854
Q ss_pred CCCCCEEEEEEcCCCCCC--cCCCCCCCCCccccCC-----------------C--------------------------
Q psy1088 303 RMLSNSIIVFVSDNGGAA--AGFNLNAASNWPLRGV-----------------K-------------------------- 337 (905)
Q Consensus 303 Gl~dnTlIIftSDHG~~~--~g~~~~~gsn~plrg~-----------------k-------------------------- 337 (905)
+|||||+|+||+..+ ++.......--++... .
T Consensus 300 ---~~TLiIVTADHetg~~~~~~~~~~~~~~~l~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 376 (421)
T PF00245_consen 300 ---DDTLIIVTADHETGLTIGGYPDYGWDIEGLANQKASSDGLPYTILSYANGPGYNVEDGTRPDVNLSDAIGPILSQRA 376 (421)
T ss_dssp ---SSEEEEEEESSEESEEEBSCCBTTSBTCSCCCCES-TTCCCCHHCEESSCCHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---CCeEEEEEecccCccccCCcccCCCChhhhhhhhhhhhhhhhhhhhhccchhhhhhcccccccchhhhhccceeccc
Confidence 899999999999873 1111000000000000 0
Q ss_pred Cccc----CCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHHHHhCC
Q psy1088 338 NTLW----EGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLLSAANK 382 (905)
Q Consensus 338 ~~~~----e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl~laGi 382 (905)
...| ..+.-||++.++|+.. .....+...||+-.|..+||+
T Consensus 377 ~vgwtt~~HTg~dV~v~A~Gp~a~----~f~G~~dNT~I~~~m~~algl 421 (421)
T PF00245_consen 377 GVGWTTGGHTGEDVPVYAYGPGAE----LFRGVYDNTDIAKKMAEALGL 421 (421)
T ss_dssp TCB-SSSSEE-S-EEEEEESTTGG----GGSSEEETTHHHHHHHHHHT-
T ss_pred ccCCcCCCCCCcceeEEEECCCcc----cCCCceehHHHHHHHHHHhCc
Confidence 0011 1234589999999864 235678899999999999985
No 41
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=98.34 E-value=4.4e-06 Score=93.42 Aligned_cols=135 Identities=16% Similarity=0.170 Sum_probs=91.0
Q ss_pred CCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy1088 218 GKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVE 297 (905)
Q Consensus 218 ~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~ 297 (905)
...+...+++.+++.|++ ++.-++.+++..|.-. .|... ...--.+|..+|.+||++++
T Consensus 369 PEMSa~evtd~~~~~i~~---g~~D~iV~N~ANpDMV----------------GHTG~--~eatiKAvEavD~~lg~ivd 427 (509)
T COG0696 369 PEMSAKEVTDALVEAIEK---GKYDLIVLNYANPDMV----------------GHTGN--FEATIKAVEAVDECLGRIVD 427 (509)
T ss_pred cccchHHHHHHHHHHHhC---CCCCEEEEecCCCccC----------------ccccc--HHHHHHHHHHHHHHHHHHHH
Confidence 345678889999998875 4556777888777652 12111 12334678999999999999
Q ss_pred HHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCeEEecceEehhHHHHHH
Q psy1088 298 ALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVHVSDWLPTLL 377 (905)
Q Consensus 298 ~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs~vDI~PTLl 377 (905)
++++.| -.+++|+|||-.-.-.... ..|. .-....-||+|+-+..... . ..-..+.||+||||
T Consensus 428 ~~~~~g----g~~~iTaDHGNaE~m~d~~---g~p~------TaHT~npVp~i~~~~~~v~-~---~~~g~LadiAPTiL 490 (509)
T COG0696 428 AVKKNG----GTLLITADHGNAEQMSDPA---GNPH------TAHTTNPVPVIYTGKKGVK-A---RKSGKLADIAPTIL 490 (509)
T ss_pred HHHhcC----CeEEEeecCcchhhccCCC---CCce------eccccCCccEEEEcCCcce-e---eeccchhhhhHHHH
Confidence 999875 5677899999754221110 1111 1122345999998732221 1 12278999999999
Q ss_pred HHhCCCCCCCcccc
Q psy1088 378 SAANKSDIPNYVNS 391 (905)
Q Consensus 378 ~laGi~~~P~~~~g 391 (905)
+++|++ .|..|.|
T Consensus 491 ~llg~~-~P~eMtg 503 (509)
T COG0696 491 DLLGLE-IPAEMTG 503 (509)
T ss_pred HHcCCC-cchhhcc
Confidence 999999 9988876
No 42
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=98.10 E-value=0.00014 Score=79.26 Aligned_cols=120 Identities=20% Similarity=0.300 Sum_probs=75.7
Q ss_pred cccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy1088 220 YSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEAL 299 (905)
Q Consensus 220 ~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~L 299 (905)
+.+..+...+...++.. +.=.|+|+|+-++..+.+.. .-..=..+|..+|..+|.+++ |
T Consensus 278 ~~dtn~~~k~k~a~eal--~~yDfv~vhik~tDeagHdG------------------~~e~Kv~~IE~iD~~i~pll~-~ 336 (408)
T COG3635 278 YIDTNYRGKAKAAIEAL--KEYDFVFVHIKATDEAGHDG------------------DFEGKVRVIEDIDKAIGPLLD-L 336 (408)
T ss_pred ccCccHHHHHHHHHHHH--hhCCEEEEEeccCccccCCC------------------CHHHhHHHHHHHHHHhhhhhc-c
Confidence 34444444444444432 12348889988887732211 112235689999999999998 3
Q ss_pred HHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCC-eEE---------ecceEe
Q psy1088 300 EQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRG-IVA---------EQYVHV 369 (905)
Q Consensus 300 k~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g-~v~---------~~~vs~ 369 (905)
. .++++|++|+||-... . + |...++ -||++||++...... +.. =..+.-
T Consensus 337 ~----~~~~~i~vt~DHsTPv-~----------v---k~Hs~d---PVPili~~~~v~~D~v~~F~E~~~~~G~Lgri~g 395 (408)
T COG3635 337 D----LDEDVIAVTGDHSTPV-S----------V---KDHSGD---PVPILIYGPYVRRDDVKRFDEFSCARGSLGRIRG 395 (408)
T ss_pred c----cCCcEEEEeCCCCCcc-c----------c---cccCCC---CccEEEecCCcccCccceecHhhhhcCCcceeeh
Confidence 2 4799999999998764 1 1 112222 399999999864311 011 125778
Q ss_pred hhHHHHHHHHhC
Q psy1088 370 SDWLPTLLSAAN 381 (905)
Q Consensus 370 vDI~PTLl~laG 381 (905)
.|++|-|+++++
T Consensus 396 ~dlm~ill~~~~ 407 (408)
T COG3635 396 SDLMPILLDLAG 407 (408)
T ss_pred HHHHHHHHHhhc
Confidence 899999999986
No 43
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=97.86 E-value=0.00059 Score=77.77 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=53.5
Q ss_pred CeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCEEEEEEcCCCCC
Q psy1088 241 PLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDES-VGKVVEALEQRRMLSNSIIVFVSDNGGA 319 (905)
Q Consensus 241 PfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~-VG~ll~~Lk~~Gl~dnTlIIftSDHG~~ 319 (905)
--|+++|+-.+..+. |.. ....-..+|..+|+. ++.|+++|++. ++.+||+|||||..
T Consensus 284 ~DfV~vh~~~~D~aG----------------H~g--d~~~kv~aiE~lD~~~~~~ll~al~~~---~~~~l~it~DH~tp 342 (395)
T PRK04200 284 HDFVFVHVEAPDEAG----------------HEG--DLEAKIKAIEDIDERVVGPILEALKKY---EDYRILVLPDHPTP 342 (395)
T ss_pred CCEEEEEecCcchhh----------------ccC--CHHHHHHHHHHHHHHhHHHHHHHHHhc---CCCEEEEeccCCcC
Confidence 458888888777611 111 123345779999998 66899999752 46789999999953
Q ss_pred CcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcC
Q psy1088 320 AAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLES 358 (905)
Q Consensus 320 ~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~ 358 (905)
. . .+.|... -||++|++++...
T Consensus 343 ~-~----------~~~Ht~~------pVP~ii~g~~~~~ 364 (395)
T PRK04200 343 I-E----------LKTHTAD------PVPFLIYGEGIEP 364 (395)
T ss_pred C-C----------CCccCCC------CEeEEEEcCCcCC
Confidence 3 1 1122222 3999999998854
No 44
>PF14707 Sulfatase_C: C-terminal region of aryl-sulfatase; PDB: 1P49_A 1E33_P 1E1Z_P 1N2K_A 1N2L_A 1E2S_P 1E3C_P 1AUK_A.
Probab=97.86 E-value=8.2e-06 Score=78.56 Aligned_cols=28 Identities=25% Similarity=0.407 Sum_probs=22.3
Q ss_pred CCcceEEEeecCccceeeeEeCCcEEEEee
Q psy1088 525 SKRNTILHNIDDEWQISALTRGKWKLVKEN 554 (905)
Q Consensus 525 ~~r~~i~~~~d~~~~~~air~g~wKlv~~~ 554 (905)
|+|+.|||.... ...|||+|+||+++.+
T Consensus 1 Spr~~~fyy~~~--~L~AVR~g~wKlhf~t 28 (131)
T PF14707_consen 1 SPREFFFYYCGN--ELMAVRYGDWKLHFPT 28 (131)
T ss_dssp -S-SEEEEEETT--EECEEEETTEEEECEE
T ss_pred CCCCeEEEeCCC--eEEEEEecCEeEEEEe
Confidence 678998887765 4889999999999985
No 45
>KOG4126|consensus
Probab=97.72 E-value=0.0012 Score=74.75 Aligned_cols=74 Identities=14% Similarity=0.318 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy1088 223 DVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQR 302 (905)
Q Consensus 223 ~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~ 302 (905)
..+++.|++.|.+. ++-|||++--.-..++. | ...-..-...+...|++|...++..+
T Consensus 328 ~eMte~Al~vL~~~--~~GffLfVEGgrID~gh----------------H--~~~a~~aL~Et~ef~~Aiq~a~~~t~-- 385 (529)
T KOG4126|consen 328 SEMTEKALEVLSKN--SKGFFLFVEGGRIDHGH----------------H--ETDARQALDETLEFDKAIQRALELTS-- 385 (529)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEecccccccc----------------c--ccHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 57899999999875 78999999753332211 0 01112234556778888888777765
Q ss_pred CCCCCEEEEEEcCCCCCC
Q psy1088 303 RMLSNSIIVFVSDNGGAA 320 (905)
Q Consensus 303 Gl~dnTlIIftSDHG~~~ 320 (905)
.++|+||+||||.+.+
T Consensus 386 --~~dTLivvTaDHsh~~ 401 (529)
T KOG4126|consen 386 --EEDTLIVVTADHSHTF 401 (529)
T ss_pred --ccCCEEEEecccccce
Confidence 4799999999999876
No 46
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=97.60 E-value=0.0025 Score=76.69 Aligned_cols=251 Identities=16% Similarity=0.076 Sum_probs=142.5
Q ss_pred CCCCCchHHHHHHhCccccccccC--CCChhhHHhhhcCCCCccCCCccccccCCC-C-----CCCCCCCCcHHHHHHHc
Q psy1088 81 DQIPTPNIDALAYSGIILKNYYTV--QLCTPSRSAIMTGKHPIHTGMQHNVLYGCE-R-----GGLPLSEKILPQYLKEL 152 (905)
Q Consensus 81 ~~~~TPnLd~LA~~Gv~f~~~ys~--~~~tPSrasllTG~yP~~~Gi~~~~~~~~~-~-----~~l~~~~~tL~e~Lk~~ 152 (905)
.+...|.+..||++=++++++|++ ..|.|.|.-++||.......-......+.. . ......-+|++|.|.++
T Consensus 145 ~r~dlPf~~aLAdaFTvcD~yf~S~~g~T~PNR~~~~sGt~~~~~~~~~~~~~n~~~~~~~~~~~~~~~w~Ti~e~L~~a 224 (690)
T TIGR03396 145 KREDIPFQYALADAFTICDAYHCSVQGGTNPNRLYLWTGTNGPLGGAGGPAVTNDDDWPGIGPGEGGYTWTTYPERLEQA 224 (690)
T ss_pred CccccHHHHHHHHHhhhhhhhcccCCCCCCcCceeeEecccCCcccCCcceecCCccccccccccCCCCcCcHHHHHHhC
Confidence 355789999999999999999984 667799999999997643111000000100 0 01234678999999999
Q ss_pred CCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccccCCCcccHHHHHHHHHH
Q psy1088 153 GYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWDLHGKYSTDVFTAEAVDI 232 (905)
Q Consensus 153 GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~d~~~~d~a~~~ 232 (905)
|..=.++... .+ +....| ..+|..+-... . .....+.+..........+.++..+-
T Consensus 225 GVSWkvYq~~-~~--n~~dnp-l~~F~~~~~~~------~--------------~~~~~~~~~~~~~~~~~~~~~~f~~D 280 (690)
T TIGR03396 225 GVSWKVYQDM-ND--NFTDNP-LAGFKQFRNAS------S--------------DNPGSPLYLGARGMSTRDLLDQLRAD 280 (690)
T ss_pred CCcEEEEecC-CC--ccccch-hHHHHHHhhhh------c--------------cCCCchhhhcccCcccccHHHHHHHH
Confidence 9754333210 00 000000 00111110000 0 00000000000000000121222222
Q ss_pred HHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEE
Q psy1088 233 IHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRR-MLSNSIIV 311 (905)
Q Consensus 233 I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~G-l~dnTlII 311 (905)
+++ ..-|-|.||.....+. .+|- ..+.+-+..|.+++++|.+.. .|++|+||
T Consensus 281 v~~--g~LP~VS~I~p~~~~s---eHP~----------------------~~~~~G~~~i~~vl~aL~~nP~vW~~Tvli 333 (690)
T TIGR03396 281 VQA--GTLPQVSWIVAPAAYS---EHPG----------------------SSPAYGAWYVSRVLDALTANPEVWSKTVLL 333 (690)
T ss_pred HHc--CCCCeEEEEecCCCCC---CCCC----------------------CChHHHHHHHHHHHHHHHhChhhhhceEEE
Confidence 322 2568888887544433 1110 234466778999999999988 59999999
Q ss_pred EEcCCCCCCcCCCCCCCC------------C-----cccc------CCCCcccCCCeeeeeEeeCCCCcCCCeEEecceE
Q psy1088 312 FVSDNGGAAAGFNLNAAS------------N-----WPLR------GVKNTLWEGGVRGAGLIWSPLLESRGIVAEQYVH 368 (905)
Q Consensus 312 ftSDHG~~~~g~~~~~gs------------n-----~plr------g~k~~~~e~~~rVPliI~~Pg~~~~g~v~~~~vs 368 (905)
||=|-...+..|-..... . ..+. +.....+--|.|||+||.+|-.+ .|.|..+...
T Consensus 334 ItyDE~gGffDHV~PP~~p~~~~~~~~~g~~t~~~~~e~~~~~~~~~~~~~p~GlG~RVP~iVISPwsr-gG~V~s~~~D 412 (690)
T TIGR03396 334 LNYDENDGFFDHVPPPVPPSYNADGTSAGKSTLDTAGEYFDVPDPAEARGRPIGLGPRVPMYVISPWSK-GGWVNSQVFD 412 (690)
T ss_pred EEEeCCCCcccCcCCCCCCCcccccccccccccCCCccccccccccccccCcCCccceeeEEEECCCCC-CCcccCcccc
Confidence 999887766554211100 0 0000 01122445589999999999885 4889999999
Q ss_pred ehhHHHHHHHHhCCC
Q psy1088 369 VSDWLPTLLSAANKS 383 (905)
Q Consensus 369 ~vDI~PTLl~laGi~ 383 (905)
|.-|+-+|-..+||.
T Consensus 413 HtSvLrflE~~fgl~ 427 (690)
T TIGR03396 413 HTSVLRFLEKRFGVR 427 (690)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999999998
No 47
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=97.37 E-value=0.001 Score=76.10 Aligned_cols=105 Identities=18% Similarity=0.257 Sum_probs=72.1
Q ss_pred CCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCC
Q psy1088 240 EPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGA 319 (905)
Q Consensus 240 kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~ 319 (905)
+.-|+++++..+.. ..|.. ....+..+|..+|..|++|++.|+. ++++||+|+|||-.
T Consensus 293 ~~Dfv~vh~~~~D~----------------~GH~g--d~~~k~~aiE~iD~~l~~il~~l~~----~~~~liITaDHgtp 350 (412)
T PRK04024 293 EYDFVLLNIKGTDE----------------AGHDG--DFEGKVEVIEKIDKMLGYILDNLDL----DEVYIAVTGDHSTP 350 (412)
T ss_pred cCCEEEEeccCcch----------------hhcCC--CHHHHHHHHHHHHHHHHHHHHHhhc----CCCEEEEecCCCCC
Confidence 46799999888776 22322 2357899999999999999999863 46799999999985
Q ss_pred CcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCCe-EEe---------cceEehhHHHHHHHHhCCC
Q psy1088 320 AAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRGI-VAE---------QYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 320 ~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g~-v~~---------~~vs~vDI~PTLl~laGi~ 383 (905)
. . .+.|... -||+||++|++...+. ..+ ..+.-.|+++.||.+++..
T Consensus 351 ~-~----------~~~HT~~------pVP~ii~g~~v~~d~~~~f~E~~~~~g~l~~~~g~~lm~~~l~~~~~~ 407 (412)
T PRK04024 351 V-E----------VKDHSGD------PVPILIYGPGVRVDDVEKFNELSAAKGGLGRIRGLDVMPILLDLMNRA 407 (412)
T ss_pred c-c----------cccCCCC------CEeEEEEcCCccCCCCCccCHHHHhCCCCCcccHHHHHHHHHHHhchH
Confidence 3 1 1112222 2999999999854211 001 1234469999999887653
No 48
>PF11658 DUF3260: Protein of unknown function (DUF3260); InterPro: IPR017744 This protein was identified by the partial phylogenetic profiling algorithm [] as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation [].
Probab=97.17 E-value=0.033 Score=63.73 Aligned_cols=265 Identities=14% Similarity=0.185 Sum_probs=160.2
Q ss_pred eEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCC--ccCCCccccccCCCCCC
Q psy1088 61 HIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHP--IHTGMQHNVLYGCERGG 137 (905)
Q Consensus 61 NIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP--~~~Gi~~~~~~~~~~~~ 137 (905)
-||||-+=|+.|||+..-|- ..-|-+.++ -+.|+|+-+ ++.+.|+---|+.+..- .++.+...
T Consensus 197 DllvlnICSLsWdDl~a~gl--~~hPl~~~F---Di~F~nFNSAtSYSGPAaIRLLRASCGQ~sH~~Ly~p--------- 262 (518)
T PF11658_consen 197 DLLVLNICSLSWDDLDAAGL--RNHPLWKRF---DIVFDNFNSATSYSGPAAIRLLRASCGQPSHSDLYQP--------- 262 (518)
T ss_pred cEEEEEecccchhhHHHhCC--ccCchHHhh---cchhcccccccccchHHHHHHHHhccCCcchHhhcCC---------
Confidence 69999999999999998774 335655544 588999988 57777887777755432 22222221
Q ss_pred CCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCC----CcCCchhHhhhhhccccccCCCcc
Q psy1088 138 LPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQ----DYFDHSAEEMKMWGLDMRRDLEPA 213 (905)
Q Consensus 138 l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~----~y~~~~~~~~~~~g~d~~~~~~~~ 213 (905)
....--|.+-|+++||++.++= .|.|. ||.|.+...... ...... |.. ..-..
T Consensus 263 -a~~qC~LF~nLa~lGf~~~l~m-nHdG~-----------Fd~Fl~~ir~~G~l~~pl~s~~-------g~~---~~~~~ 319 (518)
T PF11658_consen 263 -APQQCYLFDNLAKLGFTQQLMM-NHDGH-----------FDNFLQEIREDGGLQAPLMSQA-------GLP---VALHS 319 (518)
T ss_pred -CcccccHHHHHHhcCCchhhcc-CCCCc-----------cccHHHHHHHcCCCCCCCcCCC-------CCc---hHhhc
Confidence 1145568999999999987752 23332 444433211000 000000 000 00001
Q ss_pred cccCCCcccHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHH
Q psy1088 214 WDLHGKYSTDVFTAEAVDIIHNHSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVG 293 (905)
Q Consensus 214 ~~~~~~~~d~~~~d~a~~~I~~~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG 293 (905)
++....|.|..+.++..+-.. +..+.|--+|+++...|.++...--. .......|..-...+=+.+.
T Consensus 320 FDgSpI~~D~~vL~rW~~~r~-~~~~~~~A~~YNtIsLHDGNr~~~~~------------~~~s~~sY~~Ra~~Llddl~ 386 (518)
T PF11658_consen 320 FDGSPIYDDLAVLNRWLQQRE-KSDDGRVATFYNTISLHDGNRLPGSD------------RLNSLASYKPRAQKLLDDLD 386 (518)
T ss_pred cCCCcccchHHHHHHHHHHHh-hcCCCceEEEEeeeecccCCccCCCC------------CcccccchHHHHHHHHHHHH
Confidence 222334556555555444332 34578999999999999954331110 01122345566666667788
Q ss_pred HHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCC--cC--CCeEEecceEe
Q psy1088 294 KVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLL--ES--RGIVAEQYVHV 369 (905)
Q Consensus 294 ~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~--~~--~g~v~~~~vs~ 369 (905)
++++.|+++| .+.+||+.--||..+.|... -+-|-..-+...-+|||.-|..=|. .. ...+++++.|-
T Consensus 387 ~F~~~Le~Sg--R~v~vv~VPEHGAAlrGDk~------QiaGLReIPsP~IthvPVgiK~iG~~~~~~g~~~~I~~psSY 458 (518)
T PF11658_consen 387 RFFDELEKSG--RKVMVVVVPEHGAALRGDKM------QIAGLREIPSPSITHVPVGIKFIGMKAPHQGSPVHIDQPSSY 458 (518)
T ss_pred HHHHHHHHcC--CcEEEEEecCccccccccch------hhccccCCCCCcceecceEEEEeccCCCCCCCCeEECCCchH
Confidence 9999999998 69999999999998844221 1222333445567888887754333 22 23467888888
Q ss_pred hhHHHHHHHHhCCC
Q psy1088 370 SDWLPTLLSAANKS 383 (905)
Q Consensus 370 vDI~PTLl~laGi~ 383 (905)
+=|.--|..++..+
T Consensus 459 LAlSeLvsr~l~~~ 472 (518)
T PF11658_consen 459 LALSELVSRLLDGN 472 (518)
T ss_pred HHHHHHHHHHhcCC
Confidence 88877777777655
No 49
>TIGR03368 cellulose_yhjU cellulose synthase operon protein YhjU. This protein was identified by the partial phylogenetic profiling algorithm (PubMed:16930487) as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation (PubMed:11929533).
Probab=96.75 E-value=0.078 Score=60.41 Aligned_cols=268 Identities=15% Similarity=0.195 Sum_probs=154.3
Q ss_pred CCeEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCcccccccc-CCCChhhHHhhhcCCCC--ccCCCccccccCCCC
Q psy1088 59 PPHIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGIILKNYYT-VQLCTPSRSAIMTGKHP--IHTGMQHNVLYGCER 135 (905)
Q Consensus 59 ~PNIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv~f~~~ys-~~~~tPSrasllTG~yP--~~~Gi~~~~~~~~~~ 135 (905)
+=-||||-+=|+.|||+..-|-. .-|-+.++ -+.|+|+-+ ++.+.|+---++-+..- .+..+...
T Consensus 193 ~FDllvlnICSLSWdDl~aa~l~--~hPl~~~F---DilF~nFnSAtSYSGPAaIRlLRASCGQ~~H~~LY~p------- 260 (518)
T TIGR03368 193 QFDLLVLNICSLSWDDLEAAGLR--NHPLLSRF---DILFDNFNSATSYSGPAAIRLLRASCGQESHADLYDP------- 260 (518)
T ss_pred CcCEEEEEeccCcHHHHHHhcCc--cCchHHhh---cchhhccccccccchHHHHHHHHhccCCcchHhhcCC-------
Confidence 34799999999999999987742 34555443 478999887 57777877667744322 22222111
Q ss_pred CCCCCCCCcHHHHHHHcCCeeeeeccccCCCCCCCCCCCCCccccccccccCCCCcCCchhHhhhhhccccccCCCcccc
Q psy1088 136 GGLPLSEKILPQYLKELGYRTRIVGKWHLGFYKKEYTPTFRGFESHLGYWTGHQDYFDHSAEEMKMWGLDMRRDLEPAWD 215 (905)
Q Consensus 136 ~~l~~~~~tL~e~Lk~~GY~T~~~Gkwh~g~~~~~~~p~~~GFd~~~g~~~~~~~y~~~~~~~~~~~g~d~~~~~~~~~~ 215 (905)
....--|.+-|+++||++..+= .|.|. ||.|.........--.+.. ..-|.. ..-..++
T Consensus 261 ---a~~qCyLF~nLa~lGf~~~l~l-nHdG~-----------Fd~fl~~ir~~G~~~~pl~---~~~g~~---~~~~aFD 319 (518)
T TIGR03368 261 ---APEQCHLFSNLAKLGFTENLLL-NHDGH-----------FDNFLQLVRENGGMQSPLM---SQTGLP---VAQRSFD 319 (518)
T ss_pred ---ccccchHHHHHHHcCCchhhcc-cCCCc-----------cchHHHHHHHcCCCCCCCc---CccCCc---HHHhccC
Confidence 1144568999999999987652 23221 5554432110000000000 000000 0000112
Q ss_pred cCCCcccHHHHHHHHHHHHc--CCCCCCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHH
Q psy1088 216 LHGKYSTDVFTAEAVDIIHN--HSTDEPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVG 293 (905)
Q Consensus 216 ~~~~~~d~~~~d~a~~~I~~--~~~~kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG 293 (905)
....|.|..+.++ |+++ ...+.|--+|+++...|.++... .........|..-...+=+.+.
T Consensus 320 GSpIy~D~~vL~r---W~~~r~~~~~~~vA~~YNtIsLHDGNr~~-------------g~~~~s~~sY~~Ra~kLlddld 383 (518)
T TIGR03368 320 GSPIYDDYAVLNR---WLQERLGEPDGPVALYYNTISLHDGNRIP-------------NSGMTSLASYPLRAKKLLDDLD 383 (518)
T ss_pred CCcccchHHHHHH---HHHHhhcCCCCceEEEEeeeecccCCcCC-------------CCCccchhhhHHHHHHHHHHHH
Confidence 2233555544443 4443 34467899999999999954321 1111223456666677777888
Q ss_pred HHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEee--CCCCcC--CCeEEecceEe
Q psy1088 294 KVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIW--SPLLES--RGIVAEQYVHV 369 (905)
Q Consensus 294 ~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~--~Pg~~~--~g~v~~~~vs~ 369 (905)
++++.|+++| .+.+|||.--||..+.|... -+-|-..-+...-+|||.=|. +.+... ...+++++.|-
T Consensus 384 ~F~~~le~Sg--R~vvVv~VPEHGAAlrGDk~------QisGLREIPsP~IthvPVGik~iG~~~~~~g~~~~I~~psSy 455 (518)
T TIGR03368 384 RFFDELEKSG--RKVVVVLVPEHGAALRGDKM------QISGLREIPSPSITHVPVGVKFFGLGAPRRGATVTITAPSSY 455 (518)
T ss_pred HHHHHHHHcC--CcEEEEEecCcchhcccchh------hhccccCCCCCcccccceEEEEeccCCCCCCCCeEECCCchH
Confidence 9999999998 69999999999998744221 122223334445578887443 222222 23567888888
Q ss_pred hhHHHHHHHHhCCC
Q psy1088 370 SDWLPTLLSAANKS 383 (905)
Q Consensus 370 vDI~PTLl~laGi~ 383 (905)
+=|.--+..++..+
T Consensus 456 LAlSeLvsr~v~~~ 469 (518)
T TIGR03368 456 LALSELVSRLVAGS 469 (518)
T ss_pred HHHHHHHHHHhcCC
Confidence 87776666665544
No 50
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=96.35 E-value=0.019 Score=65.65 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=55.5
Q ss_pred eEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCc
Q psy1088 242 LFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAA 321 (905)
Q Consensus 242 fFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~ 321 (905)
-|+++++..++.. .|. .....+..+|..+|..+++++++|+. ++.+||+|+|||-..
T Consensus 289 Dfv~v~~~~~D~a----------------GH~--gd~~~k~~aIE~iD~~l~~~l~~l~~----~~~~liiTaDHgtp~- 345 (396)
T TIGR00306 289 DFVLVHTKGPDEA----------------GHD--GDPELKVRAIEKIDSKIVGPLLALDL----DETRLILTADHSTPV- 345 (396)
T ss_pred CEEEEEecCCChh----------------hhc--CCHHHHHHHHHHHHHHHHHHHHHhhh----CCCEEEEeCCCCCCC-
Confidence 4788888877761 121 13456889999999999999999863 466999999999763
Q ss_pred CCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcC
Q psy1088 322 GFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLES 358 (905)
Q Consensus 322 g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~ 358 (905)
. .+.|... -||++|++|++..
T Consensus 346 ~----------~~~Ht~~------pVP~ii~g~~~~~ 366 (396)
T TIGR00306 346 E----------VKDHSAD------PVPIVIVGPGVRV 366 (396)
T ss_pred C----------CCCCCCC------CeeEEEEeCCccC
Confidence 1 1112222 2999999999864
No 51
>PF08665 PglZ: PglZ domain; InterPro: IPR013973 This entry is a member of the Alkaline phosphatase clan.
Probab=96.28 E-value=0.0078 Score=61.37 Aligned_cols=52 Identities=19% Similarity=0.353 Sum_probs=33.9
Q ss_pred eEEEEEecCCCCCcccCCCCCCCCCchHHHHHHhCc-cc--ccccc--CCCChhhHHhhhcCCCCc
Q psy1088 61 HIIFILADDLGWNDVGFHGLDQIPTPNIDALAYSGI-IL--KNYYT--VQLCTPSRSAIMTGKHPI 121 (905)
Q Consensus 61 NIVlI~~D~lr~d~l~~~G~~~~~TPnLd~LA~~Gv-~f--~~~ys--~~~~tPSrasllTG~yP~ 121 (905)
-|+||++|+||++.-. .. ...|.+++. .+ .-+++ ++.|.-||+|||.|..|.
T Consensus 2 kv~liv~Dgmrye~~~------eL---~~~L~~~~~~~~~~~~~~a~LPS~T~~sr~ALl~g~~~~ 58 (181)
T PF08665_consen 2 KVALIVSDGMRYEQAR------EL---AESLSREGWFEVELDPALAWLPSITEVSRAALLPGKLPR 58 (181)
T ss_pred eEEEEEEcCCCHHHHH------HH---HHHHhhccCcceeeeeeeEeccchhHHHHHHHcCCCChh
Confidence 4899999999986442 11 223444432 23 23445 466667999999999885
No 52
>PRK13759 arylsulfatase; Provisional
Probab=96.19 E-value=0.0037 Score=73.86 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=23.3
Q ss_pred CCCccCCCCCCCCCCCCCccchhhhhccCCCCCcceEE
Q psy1088 494 NGTSENRSNDNSYQNEIDGIDVWSVLSRNEPSKRNTIL 531 (905)
Q Consensus 494 ~~~~~~~~~~~~~~~~lDG~~lw~~L~~~~~~~r~~i~ 531 (905)
.-|.+..+|...+ ..+||+|+++.|.+.....|+.++
T Consensus 356 ~pTil~l~g~~~p-~~~~G~sl~~~l~g~~~~~r~~~~ 392 (485)
T PRK13759 356 MPTLLDLAGGTIP-DDVDGRSLKNLIFGQYEGWRPYLH 392 (485)
T ss_pred HHHHHHHhCCCCC-cCcCCccchhhhcCCCccccceee
Confidence 3455555665543 359999999999875444454443
No 53
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=95.86 E-value=0.054 Score=61.96 Aligned_cols=60 Identities=22% Similarity=0.249 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcC
Q psy1088 280 KFAAILHKLDES-VGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLES 358 (905)
Q Consensus 280 ~Y~~~v~~lD~~-VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~ 358 (905)
.-..+|..+|.. ++.++++|++.| ++++||+|||||-.. +.+.|... -||++|++++...
T Consensus 306 ~kv~aIE~lD~~~~~~ll~al~~~~--~~~~~~vt~DH~tp~-----------~~~~Ht~~------pVP~ii~g~~~~~ 366 (396)
T TIGR02535 306 AKIKAIELIDSRIVGPLLEALSDRD--EPFRILVLPDHPTPL-----------ELKTHTAE------PVPFLLYGKGIES 366 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEeeeCccCC-----------CCCccCCC------CEeEEEEeCCcCC
Confidence 345779999997 668999997654 356999999999643 11122222 3999999998754
No 54
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=95.67 E-value=0.03 Score=64.40 Aligned_cols=92 Identities=21% Similarity=0.337 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCcCCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcC
Q psy1088 279 SKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAAGFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLES 358 (905)
Q Consensus 279 ~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~ 358 (905)
..+...+..+|+.|..|++.|++.|++|+|+||++||=|-.....+.....||+ .--+++|.+.++..
T Consensus 264 ~~~~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~~~N~~~GtDH~g------------~g~~~~v~GGgv~g 331 (392)
T PF07394_consen 264 NRHARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTPRENGSGGTDHWG------------WGGSMLVAGGGVKG 331 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCcccCCCCCCCCCC------------CcceEEEeCCCcCC
Confidence 456778899999999999999999999999999999999887432211111212 12355666655532
Q ss_pred CCeE-----------EecceEehhHHHHHHHHhCCC
Q psy1088 359 RGIV-----------AEQYVHVSDWLPTLLSAANKS 383 (905)
Q Consensus 359 ~g~v-----------~~~~vs~vDI~PTLl~laGi~ 383 (905)
|++ .+..++.-|+..|++..+|++
T Consensus 332 -G~v~G~~p~l~~~~~~~~~~~~dl~~t~~~~~~~d 366 (392)
T PF07394_consen 332 -GRVYGETPSLGEDPLDNPVSPRDLYATRLLPLGID 366 (392)
T ss_pred -CcEeCCCCCcccccccCCcChhhccCCeeeccccC
Confidence 322 345677889999999988987
No 55
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=95.58 E-value=0.0092 Score=70.85 Aligned_cols=17 Identities=53% Similarity=0.884 Sum_probs=16.1
Q ss_pred cccCCCCccccCccccc
Q psy1088 677 LFDIKNDPCEKNNLADR 693 (905)
Q Consensus 677 l~~~~~dp~e~~~l~~~ 693 (905)
||||.+||.|.+||++.
T Consensus 406 LyDL~~DP~E~~NLa~~ 422 (500)
T TIGR03417 406 LYDLEADPHELTNLADD 422 (500)
T ss_pred hcCcccCcchhhhcccC
Confidence 99999999999999875
No 56
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=95.14 E-value=0.13 Score=58.24 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=64.9
Q ss_pred eEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCc
Q psy1088 242 LFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAA 321 (905)
Q Consensus 242 fFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~ 321 (905)
-|+|+|+-++... .|.. ....=..+|..+|..|..|+ .| ++++||+||||+-...
T Consensus 281 DfV~vhvk~~Dea----------------GH~g--d~~~Kv~~IE~iD~~l~~ll-~l------~~~~ivVT~DH~TP~~ 335 (395)
T PRK04135 281 DFFFLHVKKTDSY----------------GEDG--NFEEKVKVIEEVDALLPEIL-AL------KPDVLVITGDHSTPAV 335 (395)
T ss_pred CEEEEEeccCchh----------------hccC--CHHHHHHHHHHHHHHHHHHh-cC------CCcEEEEeCCCCCccc
Confidence 4888988887762 1211 12334578999999999888 55 3559999999998752
Q ss_pred CCCCCCCCCccccCCCCcccCCCeeeeeEeeCCCCcCCC-eEEe---------cceEehhHHHHHHHHhCC
Q psy1088 322 GFNLNAASNWPLRGVKNTLWEGGVRGAGLIWSPLLESRG-IVAE---------QYVHVSDWLPTLLSAANK 382 (905)
Q Consensus 322 g~~~~~gsn~plrg~k~~~~e~~~rVPliI~~Pg~~~~g-~v~~---------~~vs~vDI~PTLl~laGi 382 (905)
. +.|... -||++|++++..... ...+ ..+.-.|+++.++.+++.
T Consensus 336 ~-----------~~Hs~d------PVP~li~g~~~~~D~v~~F~E~~~~~G~L~~~~G~~lm~~~l~~~~~ 389 (395)
T PRK04135 336 L-----------KGHSWH------PVPLLLYSKYCRPDLSQRFTERECARGGLGHIPAVDLMPLALAHALR 389 (395)
T ss_pred c-----------cccCCC------CEeEEEEcCCCCCCCCCccCHHHHcCCCcCcccHHHHHHHHHHhhhh
Confidence 1 112222 399999999886421 1111 135677899999987664
No 57
>PF14707 Sulfatase_C: C-terminal region of aryl-sulfatase; PDB: 1P49_A 1E33_P 1E1Z_P 1N2K_A 1N2L_A 1E2S_P 1E3C_P 1AUK_A.
Probab=92.89 E-value=0.036 Score=53.34 Aligned_cols=25 Identities=8% Similarity=0.024 Sum_probs=17.6
Q ss_pred CCCCccccccCCcccccCCCCCC-CC
Q psy1088 448 YNPKYENRYENGTHEYNGPKNEN-TN 472 (905)
Q Consensus 448 ~~~~eLYDl~~DP~E~~NLa~e~-p~ 472 (905)
.+...||||..||.|++||+.++ |+
T Consensus 55 ~~~PlLfnL~~DP~E~~~l~~~~~p~ 80 (131)
T PF14707_consen 55 HDPPLLFNLRRDPGERYPLADSHSPE 80 (131)
T ss_dssp ECCEEEEETTT-TT--S-T-STTTCC
T ss_pred CCCCEEEeCCcCccccCcCCcCcchh
Confidence 46778999999999999999999 84
No 58
>KOG3867|consensus
Probab=90.11 E-value=0.25 Score=57.82 Aligned_cols=44 Identities=25% Similarity=0.294 Sum_probs=39.6
Q ss_pred CCCCCCCccccccccCCCCCcccccccCCChHHHHhhhhcccceeeee
Q psy1088 571 YQNEIDGIDVWSVLSRNEPSKRNTILHNIDDEWQISALTKGKWKLVKV 618 (905)
Q Consensus 571 ~~~~~dg~d~w~~~~~~~~~~r~~~~~~~d~~~~~~~~~~~~~k~~~~ 618 (905)
....|||+|.|.+|.++. .+..|+++..+....++.+.||++.+
T Consensus 376 ~d~~idG~~l~p~L~g~~----~~s~H~~~~~y~~~~l~~~~~~~~~~ 419 (528)
T KOG3867|consen 376 QDRVIDGRDLLPLLLGEA----RHSDHEFLFHYGGRYLHARRWKLVDN 419 (528)
T ss_pred cCceecccchHHHHhccc----ccCCccceeccccchhcccceecccC
Confidence 446799999999999988 67889999999999999999999985
No 59
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=79.05 E-value=2.7 Score=48.47 Aligned_cols=38 Identities=39% Similarity=0.480 Sum_probs=29.0
Q ss_pred eEEEEEecCCCCCcccCCCC----CCCCCchHHHHHHhCccc
Q psy1088 61 HIIFILADDLGWNDVGFHGL----DQIPTPNIDALAYSGIIL 98 (905)
Q Consensus 61 NIVlI~~D~lr~d~l~~~G~----~~~~TPnLd~LA~~Gv~f 98 (905)
.+|||++|+++-.-+.-.|. +...|||||+||++|+.-
T Consensus 4 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tPnlD~lA~~g~~G 45 (412)
T PRK04024 4 KILLIILDGLGDRPVKELGGKTPLEAANTPNMDKLAKEGICG 45 (412)
T ss_pred cEEEEEecCCCCCcccccCCCChhhccCCCChHHHHHcCCcc
Confidence 68999999998544433333 356899999999999774
No 60
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=78.38 E-value=3.2 Score=47.31 Aligned_cols=40 Identities=28% Similarity=0.262 Sum_probs=30.4
Q ss_pred CCeEEEEEecCCCCCcccCCCC----CCCCCchHHHHHHhCcccc
Q psy1088 59 PPHIIFILADDLGWNDVGFHGL----DQIPTPNIDALAYSGIILK 99 (905)
Q Consensus 59 ~PNIVlI~~D~lr~d~l~~~G~----~~~~TPnLd~LA~~Gv~f~ 99 (905)
...+|||++|+++-.-+.- |. +...|||||+||++|+.-.
T Consensus 7 ~~K~v~ii~DGmgD~p~~e-~gkTPLe~A~tPnlD~lA~~G~~Gl 50 (395)
T PRK04135 7 DSKIVLLVLDGLGGLPHPE-NGKTELEAAKTPNLDALAKESDLGL 50 (395)
T ss_pred CCcEEEEEecCCCCCCCCC-CCCChhhccCCCChHHHHHcCCccc
Confidence 4469999999998555544 43 3568999999999997743
No 61
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=77.70 E-value=3.1 Score=47.73 Aligned_cols=40 Identities=25% Similarity=0.194 Sum_probs=29.3
Q ss_pred eEEEEEecCCCCCcccCCCC----CCCCCchHHHHHHhCccccc
Q psy1088 61 HIIFILADDLGWNDVGFHGL----DQIPTPNIDALAYSGIILKN 100 (905)
Q Consensus 61 NIVlI~~D~lr~d~l~~~G~----~~~~TPnLd~LA~~Gv~f~~ 100 (905)
.+|||++|+++-.-+.-.|. +...|||||+||++|+.-.-
T Consensus 2 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~g~~Gl~ 45 (396)
T TIGR02535 2 KYIILIGDGMADWPLEELGGRTPLQVANTPNMDKLAKRGRCGLL 45 (396)
T ss_pred CEEEEEecCCCCCcccccCCCChhhccCCCcHHHHHhcCCCcce
Confidence 48999999998444333332 35689999999999987543
No 62
>PF06375 BLVR: Bovine leukaemia virus receptor (BLVR); InterPro: IPR010474 Bovine leukemia virus (BLV) is one of the most common infectious cattle viruses, with between 30 and 40% of cows in the United States being infected. It is closely related to the human T-cell leukaemia virus type 1 (HTLV-1) and has highly conserved envelope glycoprotein functional domains []. BLV is an oncogenic C-type retrovirus, which results in the animals developing a malignant lymphoma. BLV, like the human and simian T cell leukaemia viruses, is a deltaretrovirus. 182 residues at the amino-terminal of the BLV envelope glycoprotein surface unit encompass the receptor-binding domain. The metabolic activity in B cells, T cells, and thymocytes is indicated by the expression of the BLV-binding receptor []. A candidate gene of the receptor (BLVR) is related, but unique, to a gene family of the delta subunit of the adaptor protein (AP) complex 3, AP-3 []. The AP-3 complex is not clathrin-associated but is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes. ; PDB: 4AFI_B.
Probab=73.91 E-value=1 Score=44.11 Aligned_cols=10 Identities=20% Similarity=-0.017 Sum_probs=0.0
Q ss_pred cCCCCCCCCC
Q psy1088 876 AVAPINKPFD 885 (905)
Q Consensus 876 ~~~~~~~~~~ 885 (905)
-.|....++|
T Consensus 125 EMPEGA~~SD 134 (154)
T PF06375_consen 125 EMPEGAKLSD 134 (154)
T ss_dssp ----------
T ss_pred cCCCCCccCc
Confidence 4666777777
No 63
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=70.57 E-value=4.3 Score=46.61 Aligned_cols=37 Identities=30% Similarity=0.282 Sum_probs=26.8
Q ss_pred EEEEecCCCCCcccCCCC----CCCCCchHHHHHHhCcccc
Q psy1088 63 IFILADDLGWNDVGFHGL----DQIPTPNIDALAYSGIILK 99 (905)
Q Consensus 63 VlI~~D~lr~d~l~~~G~----~~~~TPnLd~LA~~Gv~f~ 99 (905)
|||++|+++-.-+.-.|. +...|||||+||+.|+.-.
T Consensus 1 v~~i~DG~~D~p~~~l~gkTpLe~A~tPnlD~lA~~g~~Gl 41 (396)
T TIGR00306 1 VLIIIDGLADRPLEELDGKTPLQVAKTPNMDRLAEEGICGL 41 (396)
T ss_pred CEEEecCCCCCcccccCCCCchhccCCCChHHHHhcCCeee
Confidence 689999997444332332 3568999999999997743
No 64
>TIGR02687 conserved hypothetical protein TIGR02687. Members of this family are uncharacterized proteins sporadically distributed in bacteria and archaea, about 880 amino acids in length. This protein is repeatedly found upstream of another uncharacterized protein of about 470 amino acids in length, modeled by TIGR02688.
Probab=62.39 E-value=13 Score=46.88 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCCc
Q psy1088 279 SKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAAA 321 (905)
Q Consensus 279 ~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~~ 321 (905)
.....++..++..|++|++.|. -+.||+|+|||....
T Consensus 595 ~a~~~~l~el~~~v~~l~~~l~------~~~i~iTADHGfi~~ 631 (844)
T TIGR02687 595 EAVEETIVELKKLVKYLINRLN------GTNIIVTADHGFLYQ 631 (844)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------CcEEEEECCCccccc
Confidence 3566788888889998888773 459999999999873
No 65
>KOG1059|consensus
Probab=61.19 E-value=1.5 Score=52.21 Aligned_cols=13 Identities=38% Similarity=0.465 Sum_probs=7.6
Q ss_pred CCCCchHHH-HHHh
Q psy1088 82 QIPTPNIDA-LAYS 94 (905)
Q Consensus 82 ~~~TPnLd~-LA~~ 94 (905)
...||-|.| ||.+
T Consensus 135 ~fvTpdLARDLa~D 148 (877)
T KOG1059|consen 135 CIVTPDLARDLADD 148 (877)
T ss_pred cccCchhhHHHHHH
Confidence 445777665 5554
No 66
>COG4102 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.81 E-value=26 Score=38.74 Aligned_cols=59 Identities=15% Similarity=0.105 Sum_probs=38.2
Q ss_pred CCeEEEeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEcCCCC
Q psy1088 240 EPLFLYLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRR-MLSNSIIVFVSDNGG 318 (905)
Q Consensus 240 kPfFl~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~G-l~dnTlIIftSDHG~ 318 (905)
+-+++.+.-.++|.. - ..... .....++..++.|=..+.+.| .|+||+||..|+-|.
T Consensus 269 ~vaalsl~gfDTH~n-----q--------------~~aq~---~La~ql~~~da~l~a~~t~lG~~w~dt~i~t~tEFgR 326 (418)
T COG4102 269 QVAALSLGGFDTHAN-----Q--------------NDAQG---RLATQLGGLDAALDAFETELGARWKDTVIVTATEFGR 326 (418)
T ss_pred eEEEEeecCcccccc-----c--------------cchhh---HHHHHhcchHHHHHHHHhhccccccceEEEEeecccc
Confidence 456777777889881 0 00112 233445555555555566677 899999999999998
Q ss_pred CC
Q psy1088 319 AA 320 (905)
Q Consensus 319 ~~ 320 (905)
..
T Consensus 327 ta 328 (418)
T COG4102 327 TA 328 (418)
T ss_pred ce
Confidence 76
No 67
>KOG2572|consensus
Probab=51.30 E-value=5.6 Score=44.32 Aligned_cols=7 Identities=14% Similarity=0.577 Sum_probs=2.7
Q ss_pred HHHHHHH
Q psy1088 294 KVVEALE 300 (905)
Q Consensus 294 ~ll~~Lk 300 (905)
+++++|+
T Consensus 268 qL~dylk 274 (498)
T KOG2572|consen 268 QLIDYLK 274 (498)
T ss_pred HHHHHHH
Confidence 3334433
No 68
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=49.37 E-value=26 Score=39.60 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=26.0
Q ss_pred eEeeCCCCcCCCeEEecceEehhHHHHHHHHhCCCCCCCc
Q psy1088 349 GLIWSPLLESRGIVAEQYVHVSDWLPTLLSAANKSDIPNY 388 (905)
Q Consensus 349 liI~~Pg~~~~g~v~~~~vs~vDI~PTLl~laGi~~~P~~ 388 (905)
+.+.+|.+.. + +..-.+++.|++||||.|.|++ .|..
T Consensus 423 ~~~~~~~~~~-~-~k~~s~~IyDvaPTIL~L~gi~-~~~~ 459 (471)
T COG3379 423 FDINGPIIKD-G-KKQSSVSIYDVAPTILKLYGIN-CPSD 459 (471)
T ss_pred ccccccchhc-c-ccccceeeEeechHHHHHhCCC-CCcc
Confidence 3445666543 2 1245689999999999999999 6654
No 69
>KOG2422|consensus
Probab=49.33 E-value=8.9 Score=44.98 Aligned_cols=9 Identities=22% Similarity=0.375 Sum_probs=4.0
Q ss_pred hHHHHHHHH
Q psy1088 861 VLSQMEKEL 869 (905)
Q Consensus 861 ~~~~l~~el 869 (905)
+.+++.+|+
T Consensus 138 ~t~s~~~~~ 146 (665)
T KOG2422|consen 138 FTASLEEEA 146 (665)
T ss_pred Ccccchhcc
Confidence 444444433
No 70
>PF10500 SR-25: Nuclear RNA-splicing-associated protein; InterPro: IPR019532 SR-25, otherwise known as ADP-ribosylation factor-like factor 6-interacting protein 4, is expressed in virtually all tissue types. At the N terminus there is a repeat of serine-arginine (SR repeat), and towards the middle of the protein there are clusters of both serines and of basic amino acids. The presence of many nuclear localisation signals strongly implies that this is a nuclear protein that may contribute to RNA splicing []. SR-25 is also implicated, along with heat-shock-protein-27, as a mediator in the Rac1 (GTPase ras-related C3 botulinum toxin substrate 1; also see IPR019093 from INTERPRO) signalling pathway [].
Probab=46.75 E-value=30 Score=35.91 Aligned_cols=25 Identities=16% Similarity=-0.079 Sum_probs=18.8
Q ss_pred hhcccccc------ccHHhHHHHHHHHHHHh
Q psy1088 807 HYTTEVGY------LDPKQRFNQIAYLDKEK 831 (905)
Q Consensus 807 e~r~~vde------~mr~el~~l~~~~~~~k 831 (905)
-||.+||+ |++..=+.|...|.+++
T Consensus 171 vIRrVvDpETGRtRLIkGdGEilEEIVSkER 201 (225)
T PF10500_consen 171 VIRRVVDPETGRTRLIKGDGEILEEIVSKER 201 (225)
T ss_pred hheeeecCCCCceeeecccchHHHHHhhHHH
Confidence 79999986 35555588888887764
No 71
>KOG1059|consensus
Probab=41.82 E-value=6.8 Score=46.98 Aligned_cols=8 Identities=13% Similarity=0.215 Sum_probs=4.2
Q ss_pred CCCeeeee
Q psy1088 342 EGGVRGAG 349 (905)
Q Consensus 342 e~~~rVPl 349 (905)
+-++|||.
T Consensus 439 Dv~iRV~~ 446 (877)
T KOG1059|consen 439 DVAIRVPS 446 (877)
T ss_pred HHheechh
Confidence 33566664
No 72
>KOG3794|consensus
Probab=37.47 E-value=28 Score=38.91 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=6.0
Q ss_pred eeeEeCCcEEE
Q psy1088 541 SALTRGKWKLV 551 (905)
Q Consensus 541 ~air~g~wKlv 551 (905)
.+++.+.|=-+
T Consensus 126 rC~kChkwGH~ 136 (453)
T KOG3794|consen 126 RCLKCHKWGHI 136 (453)
T ss_pred eEEeecccccc
Confidence 45566666433
No 73
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=35.12 E-value=24 Score=34.94 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=12.9
Q ss_pred hHHHHHHHHHhcccccCC
Q psy1088 861 VLSQMEKELANINRTAVA 878 (905)
Q Consensus 861 ~~~~l~~el~~~~~~~~~ 878 (905)
-+++|-+|+.+.=..+.|
T Consensus 113 ~v~~LReeisail~~a~~ 130 (155)
T PF08496_consen 113 EVESLREEISAILSVATP 130 (155)
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 688888888776555544
No 74
>PRK13366 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=32.54 E-value=79 Score=34.66 Aligned_cols=59 Identities=10% Similarity=0.023 Sum_probs=36.8
Q ss_pred EeeccCCCCCCCCCCCCCChhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCC
Q psy1088 245 YLAHAATHSANPYEPLQAPDHYLNIHRHIEDFKRSKFAAILHKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAA 320 (905)
Q Consensus 245 ~l~~~~~H~~~~~~P~~~P~~~~~~~~~~~~~~~~~Y~~~v~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~ 320 (905)
......+|. |...++.-..+ .-......+.+.+.++-+.+++.+ -+|+|||.+||+..+
T Consensus 5 v~a~~~sH~-----P~i~~~~~~g~----------~~~~~~~~~~~a~~~i~~~i~~~~--PDvvVii~~dH~~~f 63 (284)
T PRK13366 5 TASVYTSHV-----PAIGAAIDLGK----------TGEPYWQPVFKGYEFSKQWEKEEK--PDVIFLVYNDHATAF 63 (284)
T ss_pred eEEeecCCC-----CccccccccCC----------CchHHHHHHHHHHHHHHHHHHHhC--CCEEEEEcCCcHHhh
Confidence 345678898 76655321110 011334566666667777776653 689999999998655
No 75
>PF15333 TAF1D: TATA box-binding protein-associated factor 1D
Probab=31.83 E-value=51 Score=33.70 Aligned_cols=13 Identities=31% Similarity=0.368 Sum_probs=7.3
Q ss_pred HHHHHHHHHhhhh
Q psy1088 822 NQIAYLDKEKKKK 834 (905)
Q Consensus 822 ~l~~~~~~~k~~k 834 (905)
+|++..++-|++|
T Consensus 50 ~LKaiFe~fkkrk 62 (217)
T PF15333_consen 50 TLKAIFERFKKRK 62 (217)
T ss_pred cHHHHHHHHHHHH
Confidence 5677666544433
No 76
>KOG4055|consensus
Probab=30.88 E-value=36 Score=34.02 Aligned_cols=26 Identities=12% Similarity=-0.023 Sum_probs=14.0
Q ss_pred cccccHHhHHHHHHHHHHHhhhhhhh
Q psy1088 812 VGYLDPKQRFNQIAYLDKEKKKKKKK 837 (905)
Q Consensus 812 vde~mr~el~~l~~~~~~~k~~k~kk 837 (905)
.|...+..|+.++.|-+.+-.||..|
T Consensus 108 ~daefq~r~ek~~kaaEeKTaKKRaK 133 (213)
T KOG4055|consen 108 LDAEFQIRLEKNQKAAEEKTAKKRAK 133 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555666666766655544333333
No 77
>PF08432 Vfa1: AAA-ATPase Vps4-associated protein 1; InterPro: IPR013640 This is a family of fungal proteins of unknown function.
Probab=28.51 E-value=67 Score=32.73 Aligned_cols=23 Identities=13% Similarity=-0.067 Sum_probs=14.7
Q ss_pred cccHHhHHHHHHHHHHHhhhhhh
Q psy1088 814 YLDPKQRFNQIAYLDKEKKKKKK 836 (905)
Q Consensus 814 e~mr~el~~l~~~~~~~k~~k~k 836 (905)
+.|..|++.++..++...+++++
T Consensus 65 ~el~~eiekvkke~Eekq~~k~~ 87 (182)
T PF08432_consen 65 KELEEEIEKVKKEYEEKQKWKKE 87 (182)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhh
Confidence 45677788887777655544444
No 78
>KOG1230|consensus
Probab=27.45 E-value=46 Score=37.78 Aligned_cols=13 Identities=8% Similarity=0.169 Sum_probs=8.1
Q ss_pred hHHHHHHHHHhcc
Q psy1088 861 VLSQMEKELANIN 873 (905)
Q Consensus 861 ~~~~l~~el~~~~ 873 (905)
.+..+++-|.+-.
T Consensus 40 ~i~~~iq~~eaK~ 52 (521)
T KOG1230|consen 40 DIAEIIQSLEAKQ 52 (521)
T ss_pred HHHHHHHhhhhhc
Confidence 5666666666555
No 79
>KOG2573|consensus
Probab=27.35 E-value=40 Score=37.91 Aligned_cols=19 Identities=5% Similarity=0.212 Sum_probs=11.2
Q ss_pred chhhhhccCCCCCcceEEE
Q psy1088 514 DVWSVLSRNEPSKRNTILH 532 (905)
Q Consensus 514 ~lw~~L~~~~~~~r~~i~~ 532 (905)
.+..+|...+..|.--++|
T Consensus 336 ALFRALKtrgnTPKYGLIy 354 (498)
T KOG2573|consen 336 ALFRALKTRGNTPKYGLIY 354 (498)
T ss_pred HHHHHHHhcCCCCCceeEe
Confidence 4666666555555555555
No 80
>KOG2002|consensus
Probab=26.56 E-value=61 Score=40.64 Aligned_cols=11 Identities=27% Similarity=0.616 Sum_probs=5.6
Q ss_pred CCcccccccCC
Q psy1088 589 PSKRNTILHNI 599 (905)
Q Consensus 589 ~~~r~~~~~~~ 599 (905)
+..|.+|||-+
T Consensus 712 ~~~~~~vl~~L 722 (1018)
T KOG2002|consen 712 KKNRSEVLHYL 722 (1018)
T ss_pred ccCCHHHHHHH
Confidence 44455555544
No 81
>KOG2572|consensus
Probab=26.02 E-value=38 Score=38.09 Aligned_cols=11 Identities=27% Similarity=0.401 Sum_probs=5.6
Q ss_pred hHHhhhcCCCC
Q psy1088 110 SRSAIMTGKHP 120 (905)
Q Consensus 110 SrasllTG~yP 120 (905)
..++|+-|..+
T Consensus 59 a~~~l~eGkvs 69 (498)
T KOG2572|consen 59 AVTALAEGKVS 69 (498)
T ss_pred HHHHHHcCCcc
Confidence 44555555544
No 82
>COG3511 PlcC Phospholipase C [Cell envelope biogenesis, outer membrane]
Probab=24.34 E-value=1.2e+03 Score=27.56 Aligned_cols=73 Identities=19% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCCCCchHHHHHHhCccccccccC--CCChhhHHhhhcCCC-CccCCC-ccccccCCCCCCCCCCCCcHHHHHHHcCCe
Q psy1088 81 DQIPTPNIDALAYSGIILKNYYTV--QLCTPSRSAIMTGKH-PIHTGM-QHNVLYGCERGGLPLSEKILPQYLKELGYR 155 (905)
Q Consensus 81 ~~~~TPnLd~LA~~Gv~f~~~ys~--~~~tPSrasllTG~y-P~~~Gi-~~~~~~~~~~~~l~~~~~tL~e~Lk~~GY~ 155 (905)
.+..+|.+-.||+.=+.-+++|++ ..|.|.|--++||.- |.-.+- ....... .......-.++++.|.++|-.
T Consensus 154 ~rqdip~~~alAd~ftLcD~Yf~s~~GgT~pNRly~~ta~~~P~g~~gdp~~~~p~--~~~~~~~w~~~pe~L~~agvS 230 (527)
T COG3511 154 DRQDIPIHWALADAFTLCDAYFCSLLGGTFPNRLYLITACADPDGADGDPSIVNPS--ISPQTYDWSTYPERLQDAGVS 230 (527)
T ss_pred ccccchHHHHhhhhheehhhhcccccCCCCcceeeeEEeeccCCCCCCCccccCCc--cCcccccccccHhhHhhcCCC
Confidence 345789999999998889999884 677799999999997 654321 1111111 111233557899999998854
No 83
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=24.30 E-value=77 Score=26.92 Aligned_cols=13 Identities=23% Similarity=0.422 Sum_probs=5.5
Q ss_pred HHHHHHHHHhhhh
Q psy1088 822 NQIAYLDKEKKKK 834 (905)
Q Consensus 822 ~l~~~~~~~k~~k 834 (905)
.|..+++++.+.+
T Consensus 43 kLaK~ie~~ere~ 55 (74)
T PF15086_consen 43 KLAKAIEKEEREK 55 (74)
T ss_pred HHHHHHHHHHHHH
Confidence 3444454443333
No 84
>PF10198 Ada3: Histone acetyltransferases subunit 3; InterPro: IPR019340 This entry is found in Ada3 and homologous proteins which function as part of histone acetyltransferase complexes []. Ada3 is an essential component of the Ada transcriptional coactivator (alteration/deficiency in activation) complex. It plays a key role in linking histone acetyltransferase-containing complexes to p53 (tumour suppressor protein) thereby regulating p53 acetylation, stability and transcriptional activation following DNA damage [].
Probab=23.12 E-value=95 Score=29.88 Aligned_cols=18 Identities=17% Similarity=0.148 Sum_probs=13.2
Q ss_pred ccccHHhHHHHHHHHHHH
Q psy1088 813 GYLDPKQRFNQIAYLDKE 830 (905)
Q Consensus 813 de~mr~el~~l~~~~~~~ 830 (905)
++|-++|+......+|+.
T Consensus 69 e~ma~QE~~~~l~~lD~~ 86 (131)
T PF10198_consen 69 EEMARQEYKRILDDLDKQ 86 (131)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 555588888877777775
No 85
>KOG3794|consensus
Probab=23.00 E-value=66 Score=36.09 Aligned_cols=12 Identities=17% Similarity=0.271 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q psy1088 278 RSKFAAILHKLD 289 (905)
Q Consensus 278 ~~~Y~~~v~~lD 289 (905)
++.|...-...|
T Consensus 43 ~~qyekEQe~~d 54 (453)
T KOG3794|consen 43 RRQYEKEQESHD 54 (453)
T ss_pred HHHHHHHHHHHH
Confidence 344443333333
No 86
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=22.74 E-value=49 Score=34.01 Aligned_cols=9 Identities=11% Similarity=0.294 Sum_probs=4.3
Q ss_pred cchhhhHHh
Q psy1088 704 TEVGRFNQI 712 (905)
Q Consensus 704 ~e~~~~l~~ 712 (905)
..+++.+.+
T Consensus 150 LQaG~~YAe 158 (196)
T PF08229_consen 150 LQAGQWYAE 158 (196)
T ss_pred HHhhHHHHh
Confidence 335555543
No 87
>PF05991 NYN_YacP: YacP-like NYN domain; InterPro: IPR010298 This family consists of several hypothetical bacterial proteins as well as some uncharacterised sequences from Arabidopsis thaliana. The function of this family is unknown.
Probab=22.52 E-value=71 Score=31.99 Aligned_cols=32 Identities=22% Similarity=0.342 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEEEcCCCCCC
Q psy1088 286 HKLDESVGKVVEALEQRRMLSNSIIVFVSDNGGAA 320 (905)
Q Consensus 286 ~~lD~~VG~ll~~Lk~~Gl~dnTlIIftSDHG~~~ 320 (905)
...|..|.+++..+...+ ..++|+||||....
T Consensus 77 ~tAD~~Ie~~v~~~~~~~---~~v~VVTSD~~iq~ 108 (166)
T PF05991_consen 77 ETADDYIERLVRELKNRP---RQVTVVTSDREIQR 108 (166)
T ss_pred CCHHHHHHHHHHHhccCC---CeEEEEeCCHHHHH
Confidence 478999999999988654 79999999998754
No 88
>PF08639 SLD3: DNA replication regulator SLD3; InterPro: IPR013948 The SLD3 DNA replication regulator is required for loading and maintenance of Cdc45 on chromatin during DNA replication [].
Probab=22.04 E-value=1.4e+02 Score=35.48 Aligned_cols=15 Identities=13% Similarity=0.107 Sum_probs=8.4
Q ss_pred hHHHHHHHHHhcccc
Q psy1088 861 VLSQMEKELANINRT 875 (905)
Q Consensus 861 ~~~~l~~el~~~~~~ 875 (905)
.+|-|...|--...+
T Consensus 221 ~Ld~l~DRLcIW~~l 235 (497)
T PF08639_consen 221 LLDLLLDRLCIWQSL 235 (497)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666544444
No 89
>KOG4043|consensus
Probab=21.16 E-value=53 Score=32.08 Aligned_cols=6 Identities=50% Similarity=0.667 Sum_probs=2.1
Q ss_pred HHHHHH
Q psy1088 726 KKKKKK 731 (905)
Q Consensus 726 k~k~~~ 731 (905)
|.|+.+
T Consensus 177 K~Kkhe 182 (214)
T KOG4043|consen 177 KHKKHE 182 (214)
T ss_pred hhhhhh
Confidence 333333
No 90
>PRK14552 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional
Probab=21.09 E-value=48 Score=38.33 Aligned_cols=21 Identities=14% Similarity=0.303 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy1088 281 FAAILHKLDESVGKVVEALEQ 301 (905)
Q Consensus 281 Y~~~v~~lD~~VG~ll~~Lk~ 301 (905)
--+++..+|..|..+...|++
T Consensus 144 ai~~ld~ldk~in~~~~RLre 164 (414)
T PRK14552 144 AIRAIDDIDKTINLFSERLRE 164 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334555666666666666554
Done!