BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10880
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=Dll1 PE=2 SV=1
Length = 714
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 61/96 (63%)
Query: 38 DDDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCA 97
D DD + LISRLTTQR L VG W++D H S + + Y YR CD HYYG GC+
Sbjct: 129 DSPDDLATENPERLISRLTTQRHLTVGEEWSQDLHSSGRTDLRYSYRFVCDEHYYGEGCS 188
Query: 98 TLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAV 133
CRPRDD+FGH+TC G++ C PGW G YCT +
Sbjct: 189 VFCRPRDDAFGHFTCGERGEKMCDPGWKGQYCTDPI 224
>sp|O00548|DLL1_HUMAN Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=2 SV=2
Length = 723
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 61/96 (63%)
Query: 38 DDDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCA 97
D DD + LISRL TQR L VG W++D H S + + Y YR CD HYYG GC+
Sbjct: 130 DSPDDLATENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCDEHYYGEGCS 189
Query: 98 TLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAV 133
CRPRDD+FGH+TC G++ C PGW G YCT+ +
Sbjct: 190 VFCRPRDDAFGHFTCGERGEKVCNPGWKGPYCTEPI 225
>sp|Q61483|DLL1_MOUSE Delta-like protein 1 OS=Mus musculus GN=Dll1 PE=1 SV=2
Length = 722
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 61/96 (63%)
Query: 38 DDDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCA 97
D DD + LISRLTTQR L VG W++D H S + + Y YR CD HYYG GC+
Sbjct: 129 DSPDDLATENPERLISRLTTQRHLTVGEEWSQDLHSSGRTDLRYSYRFVCDEHYYGEGCS 188
Query: 98 TLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAV 133
CRPRDD+FGH+TC G++ C PGW G YCT +
Sbjct: 189 VFCRPRDDAFGHFTCGDRGEKMCDPGWKGQYCTDPI 224
>sp|P10041|DL_DROME Neurogenic locus protein delta OS=Drosophila melanogaster GN=Dl
PE=1 SV=2
Length = 833
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 77/135 (57%), Gaps = 24/135 (17%)
Query: 49 KTLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFG 108
K LI RL Q+ L+V W ++ +S ++S+ Y++RVTCD +YYG+GCA CRPRDDSFG
Sbjct: 146 KLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFCRPRDDSFG 205
Query: 109 HYTCSHTGDRKCLPGWSGDYC-----------------TKAVQKLSPTKALPNRTSRTLF 151
H TCS TG+ CL GW GDYC + V +L AL N
Sbjct: 206 HSTCSETGEIICLTGWQGDYCHIPKCAKGCEHGHCDKPNQCVCQLGWKGALCNE------ 259
Query: 152 CVLEPSMQLYGNCAK 166
CVLEP+ ++G C K
Sbjct: 260 CVLEPNC-IHGTCNK 273
>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2
Length = 717
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 54/83 (65%)
Query: 51 LISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHY 110
LISR+TTQR L VG W++D + + Y YR CD HYYG GC+ CRPRDD+FGH+
Sbjct: 141 LISRMTTQRHLTVGEEWSQDLQVGGRTELKYSYRFVCDEHYYGEGCSVFCRPRDDTFGHF 200
Query: 111 TCSHTGDRKCLPGWSGDYCTKAV 133
TC G+ C GW G YCT+ +
Sbjct: 201 TCGERGEIICNSGWKGQYCTEPI 223
>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla PE=1 SV=1
Length = 772
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%)
Query: 51 LISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHY 110
+IS +TTQR L VG W++D H + + Y YR CD HYYG GC+ CRPRDD+FGH+
Sbjct: 145 IISTMTTQRHLTVGEDWSQDLHSVGRTELKYSYRFVCDEHYYGEGCSVFCRPRDDAFGHF 204
Query: 111 TCSHTGDRKCLPGWSGDYCTKAV 133
TC G+ C GW G YCT+ +
Sbjct: 205 TCGERGEIICDAGWKGQYCTEPI 227
>sp|Q9IAT6|DLLC_DANRE Delta-like protein C OS=Danio rerio GN=dlc PE=2 SV=1
Length = 664
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%)
Query: 51 LISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHY 110
+ISRL T+R L + W++D H S + + YRV CD Y+G C+ CRPR+D+FGH+
Sbjct: 120 MISRLATKRRLAISEDWSQDVHLGRQSQLRFSYRVVCDEFYHGEECSDFCRPRNDTFGHF 179
Query: 111 TCSHTGDRKCLPGWSGDYCTKAV 133
C G+R CLPGW GDYCT+ +
Sbjct: 180 NCDAAGNRICLPGWKGDYCTEPI 202
>sp|O57409|DLLB_DANRE Delta-like protein B OS=Danio rerio GN=dlb PE=1 SV=1
Length = 615
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%)
Query: 51 LISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHY 110
LISRL T+R L VG W++D H S + Y Y V CD Y+G C+ CRPRDD+ GHY
Sbjct: 125 LISRLATRRRLAVGEDWSQDVHFGDQSELRYSYHVFCDEFYFGEACSDYCRPRDDTLGHY 184
Query: 111 TCSHTGDRKCLPGWSGDYCTKAV 133
TC G+++CL GW GDYC+ +
Sbjct: 185 TCDENGNKECLVGWQGDYCSDPI 207
>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1
Length = 685
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 50 TLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGH 109
LIS++ Q L VG +W DE S + + Y YRV C +YYG+ C+ LC+ R+D FGH
Sbjct: 138 ALISKIAIQGSLAVGQNWLLDEQTSTLTRLRYSYRVICSDNYYGDNCSRLCKKRNDHFGH 197
Query: 110 YTCSHTGDRKCLPGWSGDYCTKAV 133
Y C G+ CLPGW+G+YC + +
Sbjct: 198 YVCQPDGNLSCLPGWTGEYCQQPI 221
>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a PE=2 SV=1
Length = 1242
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 51 LISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHY 110
+I + ++ W +H + Y+ RVTCD HY+G GC CRPRDD FGHY
Sbjct: 152 VIEKAVQSGMINPNRQWQVLKHNGPVAQFQYQIRVTCDEHYFGFGCNKFCRPRDDFFGHY 211
Query: 111 TCSHTGDRKCLPGWSGDYCTKAVQK 135
TC H G++ CL GW+G C A+ K
Sbjct: 212 TCDHNGNKTCLEGWAGPECNTAICK 236
>sp|Q9JI71|DLL4_MOUSE Delta-like protein 4 OS=Mus musculus GN=Dll4 PE=2 SV=2
Length = 686
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 50 TLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGH 109
+LIS++ Q L VG W DE + + Y YRV C +YYG C+ LC+ RDD FGH
Sbjct: 139 SLISQIIIQGSLAVGKIWRTDEQNDTLTRLSYSYRVICSDNYYGESCSRLCKKRDDHFGH 198
Query: 110 YTCSHTGDRKCLPGWSGDYCTKAV 133
Y C G CLPGW+G YC + +
Sbjct: 199 YECQPDGSLSCLPGWTGKYCDQPI 222
>sp|Q63722|JAG1_RAT Protein jagged-1 OS=Rattus norvegicus GN=Jag1 PE=1 SV=2
Length = 1219
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 50 TLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGH 109
++I + + ++ W + + + Y+ RVTCD HYYG GC CRPRDD FGH
Sbjct: 150 SIIEKASHSGMINPSRQWQTLKQNTGIAHFEYQIRVTCDDHYYGFGCNKFCRPRDDFFGH 209
Query: 110 YTCSHTGDRKCLPGWSGDYCTKAV--QKLSP 138
Y C G++ C+ GW G C KA+ Q SP
Sbjct: 210 YACDQNGNKTCMEGWMGPECNKAICRQGCSP 240
>sp|Q9QXX0|JAG1_MOUSE Protein jagged-1 OS=Mus musculus GN=Jag1 PE=1 SV=1
Length = 1218
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 50 TLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGH 109
++I + + ++ W + + + Y+ RVTCD HYYG GC CRPRDD FGH
Sbjct: 150 SIIEKASHSGMINPSRQWQTLKQNTGIAHFEYQIRVTCDDHYYGFGCNKFCRPRDDFFGH 209
Query: 110 YTCSHTGDRKCLPGWSGDYCTKAV--QKLSP 138
Y C G++ C+ GW G C KA+ Q SP
Sbjct: 210 YACDQNGNKTCMEGWMGPDCNKAICRQGCSP 240
>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
Length = 1213
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%)
Query: 39 DDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCAT 98
D ++E LI + ++ W H + Y+ RVTC HYYG GC
Sbjct: 136 DFNNETASESGKLIEKAYHSGMINPNRQWQRLTHNGPVAQFEYQIRVTCLEHYYGFGCNK 195
Query: 99 LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAV 133
CRPRD+ FGHYTC G++ CL GW+G C A+
Sbjct: 196 FCRPRDEFFGHYTCDQNGNKTCLEGWTGPDCNTAI 230
>sp|P78504|JAG1_HUMAN Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3
Length = 1218
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 50 TLISRLTTQRWLDVGPSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGH 109
++I + + ++ W + + + Y+ RVTCD +YYG GC CRPRDD FGH
Sbjct: 150 SIIEKASHSGMINPSRQWQTLKQNTGVAHFEYQIRVTCDDYYYGFGCNKFCRPRDDFFGH 209
Query: 110 YTCSHTGDRKCLPGWSGDYCTKAV--QKLSP 138
Y C G++ C+ GW G C +A+ Q SP
Sbjct: 210 YACDQNGNKTCMEGWMGPECNRAICRQGCSP 240
>sp|P18168|SERR_DROME Protein serrate OS=Drosophila melanogaster GN=Ser PE=1 SV=3
Length = 1404
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%)
Query: 65 PSWTEDEHKSAHSSMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHYTCSHTGDRKCLPGW 124
P W +H ++ + Y RV C YY C T CRPRDD FGHY C G + CL GW
Sbjct: 215 PEWKTLDHIGRNARITYRVRVQCAVTYYNTTCTTFCRPRDDQFGHYACGSEGQKLCLNGW 274
Query: 125 SGDYCTKAVQK 135
G C +A+ K
Sbjct: 275 QGVNCEEAICK 285
>sp|Q9QYE5|JAG2_MOUSE Protein jagged-2 OS=Mus musculus GN=Jag2 PE=2 SV=2
Length = 1247
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 35 DDDDDDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSML-YEYRVTCDPHYYG 93
D+D D+E+ LI R++ ++ W + H S H + L + RV CD +YY
Sbjct: 152 DNDTTPDEEL------LIERVSHAGMINPEDRW-KSLHFSGHVAHLELQIRVRCDENYYS 204
Query: 94 NGCATLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQK 135
C CRPR+D FGHYTC G++ C+ GW G C +AV K
Sbjct: 205 ATCNKFCRPRNDFFGHYTCDQYGNKACMDGWMGKECKEAVCK 246
>sp|P97607|JAG2_RAT Protein jagged-2 (Fragment) OS=Rattus norvegicus GN=Jag2 PE=2 SV=1
Length = 1202
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 35 DDDDDDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSML-YEYRVTCDPHYYG 93
D+D D+E+ LI R++ ++ W + H S H + L + RV CD +YY
Sbjct: 106 DNDTTPDEEL------LIERVSHAGMINPEDRW-KSLHFSGHVAHLELQIRVRCDENYYS 158
Query: 94 NGCATLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQK 135
C CRPR+D FGHYTC G++ C+ GW G C +AV K
Sbjct: 159 ATCNKFCRPRNDFFGHYTCDQYGNKACMDGWMGKECKEAVCK 200
>sp|Q9Y219|JAG2_HUMAN Protein jagged-2 OS=Homo sapiens GN=JAG2 PE=1 SV=3
Length = 1238
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 35 DDDDDDDDEVIITCKTLISRLTTQRWLDVGPSWTEDEHKSAHSSML-YEYRVTCDPHYYG 93
D+D ++E+ LI R++ ++ W + H S H + L + RV CD +YY
Sbjct: 152 DNDTTPNEEL------LIERVSHAGMINPEDRW-KSLHFSGHVAHLELQIRVRCDENYYS 204
Query: 94 NGCATLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQK 135
C CRPR+D FGHYTC G++ C+ GW G C +AV K
Sbjct: 205 ATCNKFCRPRNDFFGHYTCDQYGNKACMDGWMGKECKEAVCK 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,605,305
Number of Sequences: 539616
Number of extensions: 3888906
Number of successful extensions: 185110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2437
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 79313
Number of HSP's gapped (non-prelim): 48022
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)