Query psy10880
Match_columns 166
No_of_seqs 200 out of 1169
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 20:49:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10880.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10880hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj2_A Jagged-1; signalling, p 99.4 2.6E-14 8.8E-19 111.0 2.1 83 78-161 12-94 (169)
2 4d90_A EGF-like repeat and dis 99.2 3.9E-11 1.3E-15 89.3 6.1 92 71-164 9-131 (143)
3 2vj3_A Neurogenic locus notch 99.1 5E-11 1.7E-15 88.9 4.7 94 70-165 15-118 (135)
4 2ygq_A WIF-1, WNT inhibitory f 99.1 1E-10 3.5E-15 99.5 6.4 77 82-164 164-242 (324)
5 2ygq_A WIF-1, WNT inhibitory f 99.0 1.9E-10 6.4E-15 97.9 4.6 75 82-161 196-272 (324)
6 2vj2_A Jagged-1; signalling, p 98.9 4.2E-10 1.4E-14 87.1 3.8 46 84-130 51-97 (169)
7 2wg3_C Hedgehog-interacting pr 98.9 1.1E-10 3.8E-15 103.5 0.1 74 85-165 379-454 (463)
8 2gy5_A Angiopoietin-1 receptor 98.9 9.4E-10 3.2E-14 96.8 5.8 82 80-165 182-277 (423)
9 1tpg_A T-plasminogen activator 98.9 5.9E-10 2E-14 78.5 2.5 75 82-165 1-85 (91)
10 2gy5_A Angiopoietin-1 receptor 98.8 3.2E-09 1.1E-13 93.4 4.7 83 81-165 214-319 (423)
11 3fcs_B Integrin beta-3; beta p 98.8 3.8E-09 1.3E-13 98.2 4.5 89 74-165 446-559 (690)
12 3k6s_B Integrin beta-2; cell r 98.6 2.5E-08 8.5E-13 92.7 3.9 80 83-165 493-591 (687)
13 3fcs_B Integrin beta-3; beta p 98.6 2.3E-08 8E-13 92.9 3.2 81 82-165 503-599 (690)
14 2p28_B Integrin beta-2; hybrid 98.5 1E-08 3.5E-13 83.1 0.6 80 83-165 107-213 (217)
15 3k6s_B Integrin beta-2; cell r 98.4 4.7E-08 1.6E-12 90.9 1.6 81 82-165 445-552 (687)
16 2w86_A Fibrillin-1, fibrillin1 98.4 8.7E-08 3E-12 71.9 2.6 89 74-163 15-142 (147)
17 1z1y_A Ookinete surface protei 98.4 4.4E-08 1.5E-12 76.1 0.0 91 70-162 56-172 (186)
18 1dx5_I Thrombomodulin; serine 98.4 3.5E-08 1.2E-12 72.1 -0.6 83 75-163 15-113 (118)
19 1yo8_A Thrombospondin-2; EGF, 98.3 3.3E-07 1.1E-11 84.5 4.5 93 70-162 11-141 (634)
20 1z1y_A Ookinete surface protei 98.3 2.5E-08 8.6E-13 77.5 -2.7 85 74-160 16-126 (186)
21 4aqs_A Laminin subunit beta-1; 98.3 3.8E-07 1.3E-11 81.4 4.3 80 86-166 422-525 (525)
22 1klo_A Laminin; glycoprotein; 98.2 1.5E-06 5.1E-11 66.9 5.9 78 81-161 16-142 (162)
23 1uzk_A Fibrillin-1; glycoprote 98.1 2.5E-07 8.4E-12 70.4 -1.5 25 74-98 15-43 (162)
24 2bou_A EGF-like module contain 98.0 4.3E-07 1.5E-11 67.7 -0.8 81 82-162 18-131 (143)
25 2vj3_A Neurogenic locus notch 98.0 3.5E-06 1.2E-10 62.3 3.0 62 71-133 54-121 (135)
26 1aut_L Activated protein C; se 97.9 8.9E-06 3.1E-10 58.7 3.6 52 109-161 25-86 (114)
27 4d90_A EGF-like repeat and dis 97.9 8.4E-06 2.9E-10 60.1 3.4 48 116-164 23-93 (143)
28 2p28_B Integrin beta-2; hybrid 97.8 1.2E-05 4.2E-10 65.0 3.1 51 106-158 98-162 (217)
29 1emn_A Fibrillin; extracellula 97.8 9E-06 3.1E-10 55.5 1.9 47 116-163 26-78 (82)
30 2bou_A EGF-like module contain 97.7 1.3E-05 4.5E-10 59.4 2.3 62 94-161 3-79 (143)
31 2wg3_C Hedgehog-interacting pr 97.6 9.8E-06 3.3E-10 71.7 0.7 48 83-132 408-456 (463)
32 2c4f_L Coagulation factor VII 97.6 2.6E-05 8.9E-10 58.4 2.6 44 117-160 69-120 (142)
33 3zyj_B Netrin-G1; cell adhesio 97.6 4.6E-05 1.6E-09 67.3 4.2 80 79-165 309-397 (426)
34 3u7u_G Neuregulin 1; signaling 97.6 2.8E-05 9.4E-10 50.2 2.0 39 126-165 1-48 (55)
35 3h5c_B Vitamin K-dependent pro 97.6 8.8E-05 3E-09 61.3 5.6 45 116-161 26-76 (317)
36 1x7a_L Coagulation factor IX, 97.6 5.1E-05 1.7E-09 57.3 3.7 61 70-131 56-126 (146)
37 1nfu_B Coagulation factor XA, 97.5 1.4E-05 4.8E-10 63.7 -0.3 42 117-159 64-111 (195)
38 4fbr_A Lectin, myxobacterial h 97.5 1.4E-06 4.9E-11 72.7 -6.5 86 70-161 107-198 (267)
39 2vh0_B Activated factor XA lig 97.4 1.8E-05 6.2E-10 58.7 -0.3 43 117-160 64-112 (134)
40 1lmj_A Fibrillin 1; EGF, calci 97.4 3.7E-05 1.3E-09 52.7 0.8 46 118-163 27-81 (86)
41 1x7a_L Coagulation factor IX, 97.3 7E-05 2.4E-09 56.5 2.1 43 117-160 70-117 (146)
42 2ygo_A WIF-1, WNT inhibitory f 97.3 0.00016 5.6E-09 57.4 4.2 27 107-133 156-182 (188)
43 2w2n_E LDL receptor, low-densi 97.3 4.1E-05 1.4E-09 55.0 0.4 73 86-162 17-101 (107)
44 1tpg_A T-plasminogen activator 97.3 0.00014 4.8E-09 50.6 3.0 53 78-133 27-88 (91)
45 2e26_A Reelin, reeler protein; 97.3 4.4E-05 1.5E-09 71.3 0.1 47 86-135 521-569 (725)
46 4fbr_A Lectin, myxobacterial h 97.2 4.7E-06 1.6E-10 69.6 -6.1 86 72-165 42-134 (267)
47 1klo_A Laminin; glycoprotein; 97.2 0.00018 6.3E-09 55.0 2.9 21 111-131 125-146 (162)
48 2c4f_L Coagulation factor VII 97.1 0.00027 9.3E-09 52.7 3.5 64 69-133 54-131 (142)
49 1yo8_A Thrombospondin-2; EGF, 97.1 0.00034 1.2E-08 64.5 4.1 83 75-158 62-177 (634)
50 1nfu_B Coagulation factor XA, 97.0 3.7E-05 1.3E-09 61.2 -2.3 63 70-133 50-123 (195)
51 1aut_L Activated protein C; se 97.0 0.00011 3.7E-09 52.8 0.3 57 71-128 23-87 (114)
52 2vh0_B Activated factor XA lig 97.0 4.6E-05 1.6E-09 56.5 -2.3 62 70-132 50-122 (134)
53 2ygo_A WIF-1, WNT inhibitory f 96.9 0.00049 1.7E-08 54.7 3.3 37 126-165 143-179 (188)
54 3ca7_A Protein spitz; argos, E 96.9 6.5E-05 2.2E-09 47.4 -2.0 36 117-165 4-47 (52)
55 1z6c_A Vitamin K-dependent pro 96.5 0.00071 2.4E-08 46.3 1.1 40 117-161 26-74 (87)
56 3u7u_G Neuregulin 1; signaling 96.2 0.0014 4.7E-08 42.1 1.3 18 116-133 34-51 (55)
57 3v65_B Low-density lipoprotein 96.2 0.0012 3.9E-08 56.0 1.0 40 118-159 26-73 (386)
58 4aqs_A Laminin subunit beta-1; 96.2 0.0011 3.7E-08 59.0 0.7 51 81-131 458-525 (525)
59 3p5b_L Low density lipoprotein 96.0 0.0029 1E-07 53.9 2.8 13 149-161 59-71 (400)
60 1dx5_I Thrombomodulin; serine 96.0 0.0014 4.7E-08 47.3 0.5 47 108-161 22-72 (118)
61 3h5c_B Vitamin K-dependent pro 95.9 0.0049 1.7E-07 50.7 3.6 58 70-128 13-77 (317)
62 1k36_A Epiregulin; EGF-like fo 95.9 0.0031 1.1E-07 38.7 1.8 26 139-165 12-42 (46)
63 1edm_B Factor IX; epidermal gr 95.8 0.0057 2E-07 35.5 2.6 26 139-165 9-38 (39)
64 1lmj_A Fibrillin 1; EGF, calci 95.8 0.0011 3.7E-08 45.2 -0.7 55 74-128 16-80 (86)
65 1emn_A Fibrillin; extracellula 95.8 0.0014 4.7E-08 44.4 -0.3 54 74-128 17-77 (82)
66 1edm_B Factor IX; epidermal gr 95.6 0.011 3.7E-07 34.3 3.3 23 74-96 15-37 (39)
67 1egf_A Epidermal growth factor 95.3 0.016 5.4E-07 36.2 3.4 16 118-133 31-46 (53)
68 2p26_A Integrin beta-2; hybrid 95.1 0.015 5.2E-07 48.5 3.8 52 108-161 200-265 (280)
69 1egf_A Epidermal growth factor 94.9 0.019 6.5E-07 35.8 3.0 25 140-165 13-43 (53)
70 4aqt_A Laminin subunit gamma-1 94.7 0.016 5.5E-07 50.2 2.9 17 82-98 271-287 (375)
71 1z6c_A Vitamin K-dependent pro 94.4 0.014 4.8E-07 39.7 1.5 56 73-132 15-79 (87)
72 1a3p_A Epidermal growth factor 94.3 0.014 4.8E-07 35.2 1.2 17 117-133 27-43 (45)
73 1n7d_A LDL receptor, low-densi 94.3 0.051 1.7E-06 49.8 5.4 44 116-161 315-365 (699)
74 2e26_A Reelin, reeler protein; 94.2 0.0055 1.9E-07 57.3 -1.1 44 118-165 520-564 (725)
75 1k36_A Epiregulin; EGF-like fo 94.0 0.038 1.3E-06 33.7 2.8 15 118-132 30-44 (46)
76 2w2n_E LDL receptor, low-densi 93.8 0.029 1E-06 39.8 2.3 43 118-161 16-61 (107)
77 1a3p_A Epidermal growth factor 93.8 0.025 8.7E-07 34.0 1.6 30 69-98 10-41 (45)
78 1uzk_A Fibrillin-1; glycoprote 93.5 0.0058 2E-07 45.9 -2.1 43 117-159 25-84 (162)
79 3p5b_L Low density lipoprotein 93.4 0.072 2.5E-06 45.2 4.4 53 74-128 12-72 (400)
80 2fd6_A Urokinase-type plasmino 93.2 0.073 2.5E-06 38.7 3.6 54 70-131 3-63 (122)
81 1hae_A Heregulin-alpha; growth 93.1 0.03 1E-06 35.9 1.2 18 117-134 33-50 (63)
82 3zyj_B Netrin-G1; cell adhesio 93.0 0.02 6.9E-07 50.5 0.4 44 110-159 377-421 (426)
83 2p26_A Integrin beta-2; hybrid 93.0 0.034 1.2E-06 46.3 1.8 48 83-131 207-275 (280)
84 1nql_B Epidermal growth factor 92.7 0.043 1.5E-06 34.5 1.5 16 118-133 31-46 (53)
85 1nql_B Epidermal growth factor 92.2 0.038 1.3E-06 34.7 0.8 31 68-98 12-44 (53)
86 2k2s_B Micronemal protein 6; m 92.1 0.035 1.2E-06 36.1 0.6 20 144-164 25-48 (61)
87 1hae_A Heregulin-alpha; growth 92.0 0.083 2.8E-06 33.8 2.2 29 70-98 14-47 (63)
88 3v65_B Low-density lipoprotein 91.8 0.048 1.6E-06 45.9 1.1 55 75-131 16-83 (386)
89 2k2s_B Micronemal protein 6; m 91.6 0.081 2.8E-06 34.3 1.9 22 75-96 26-48 (61)
90 3ca7_A Protein spitz; argos, E 91.6 0.094 3.2E-06 32.4 2.1 16 117-132 34-49 (52)
91 4aqt_A Laminin subunit gamma-1 91.1 0.24 8.3E-06 42.7 4.9 16 117-132 273-288 (375)
92 2fd6_A Urokinase-type plasmino 90.6 0.16 5.4E-06 36.9 2.8 40 117-161 20-59 (122)
93 1g1s_A P-selectin; selectin, l 90.5 0.037 1.3E-06 40.9 -0.7 25 140-165 126-154 (162)
94 3ltf_D Protein spitz; receptor 90.4 0.13 4.3E-06 32.9 1.9 17 82-98 32-48 (58)
95 1g1s_A P-selectin; selectin, l 90.2 0.14 4.7E-06 37.8 2.2 17 117-133 141-157 (162)
96 2y38_A Laminin subunit alpha-5 90.0 0.23 7.8E-06 43.4 3.8 16 149-165 356-372 (403)
97 3m0c_C LDL receptor, low-densi 89.7 0.094 3.2E-06 49.1 1.1 44 116-161 333-383 (791)
98 3ltf_D Protein spitz; receptor 86.9 0.14 4.8E-06 32.6 0.3 16 117-132 34-49 (58)
99 3e50_C Protransforming growth 86.8 0.33 1.1E-05 30.3 2.0 12 150-161 30-41 (50)
100 2ddu_A Reelin; beta-jelly-roll 86.6 0.063 2.2E-06 46.8 -2.0 34 92-132 190-225 (387)
101 2y38_A Laminin subunit alpha-5 85.8 0.56 1.9E-05 40.9 3.6 20 82-102 285-304 (403)
102 3cfw_A L-selectin; EGF, cell a 85.7 0.23 7.8E-06 36.6 0.9 22 143-165 130-154 (164)
103 1n7d_A LDL receptor, low-densi 85.2 2.2 7.5E-05 38.9 7.4 44 116-160 277-325 (699)
104 3t3p_B Integrin beta-3; integr 84.9 0.27 9.1E-06 43.9 1.1 15 116-130 458-472 (472)
105 3g5c_A ADAM 22; alpha/beta fol 82.7 0.36 1.2E-05 43.3 1.0 28 106-133 456-483 (510)
106 1g1t_A E-selectin; EGF, adhesi 82.3 0.16 5.4E-06 37.1 -1.2 21 144-165 131-154 (157)
107 1iox_A Betacellulin; EGF-like 81.7 0.43 1.5E-05 29.6 0.8 16 117-132 31-46 (50)
108 3v4v_B Integrin beta-7; cell a 80.6 0.33 1.1E-05 43.7 0.0 20 108-130 474-493 (503)
109 3cfw_A L-selectin; EGF, cell a 79.4 1.2 4E-05 32.7 2.7 19 115-133 139-157 (164)
110 1xdt_R Hbegf, heparin-binding 78.9 0.72 2.5E-05 31.5 1.3 13 117-129 63-75 (79)
111 2rnl_A Amphiregulin; AR, color 77.2 0.95 3.3E-05 28.1 1.4 15 117-131 35-49 (50)
112 3e50_C Protransforming growth 77.1 1.2 4.1E-05 27.7 1.8 18 81-98 28-45 (50)
113 3m0c_C LDL receptor, low-densi 74.5 2.5 8.6E-05 39.5 4.1 50 75-126 325-382 (791)
114 2rnl_A Amphiregulin; AR, color 74.4 2.1 7E-05 26.5 2.4 25 74-98 23-49 (50)
115 1q4g_A Prostaglandin G/H synth 74.4 1.3 4.4E-05 40.0 2.0 30 69-98 9-40 (553)
116 1xdt_R Hbegf, heparin-binding 74.0 0.89 3E-05 31.1 0.7 17 82-98 61-77 (79)
117 1iox_A Betacellulin; EGF-like 73.9 1.3 4.5E-05 27.3 1.4 25 74-98 19-45 (50)
118 1g1t_A E-selectin; EGF, adhesi 72.0 2 7E-05 30.9 2.3 17 117-133 141-157 (157)
119 3nt1_A Prostaglandin-endoperox 71.1 1.9 6.3E-05 39.4 2.3 30 69-98 8-39 (587)
120 3asi_A Neurexin-1-alpha; beta- 69.3 1.9 6.6E-05 36.4 1.9 27 138-165 190-221 (410)
121 4cpa_I Metallocarboxypeptidase 69.0 3.5 0.00012 24.0 2.3 23 91-113 3-25 (38)
122 2i9a_A Urokinase-type plasmino 68.8 3.4 0.00012 30.8 2.9 30 69-98 14-46 (145)
123 1apq_A Complement protease C1R 68.6 2.7 9.1E-05 25.1 1.9 20 75-94 25-44 (53)
124 1q4g_A Prostaglandin G/H synth 68.0 0.86 3E-05 41.1 -0.6 18 116-133 24-42 (553)
125 1szb_A Mannose binding lectin- 65.3 0.99 3.4E-05 33.6 -0.7 40 122-162 113-160 (170)
126 2i9a_A Urokinase-type plasmino 64.7 2.7 9.4E-05 31.3 1.7 17 117-133 32-48 (145)
127 2w86_A Fibrillin-1, fibrillin1 61.6 6.1 0.00021 28.5 3.1 16 107-128 126-141 (147)
128 3nt1_A Prostaglandin-endoperox 60.6 2.4 8.2E-05 38.6 0.8 18 116-133 23-41 (587)
129 3qcw_A Neurexin-1-alpha; synap 55.1 5.5 0.00019 38.8 2.4 27 138-165 1022-1053(1245)
130 1kig_L Factor XA; glycoprotein 53.6 4.3 0.00015 24.6 0.9 27 95-130 7-37 (51)
131 3fl7_A Ephrin receptor; ATP-bi 47.4 7.5 0.00026 34.7 1.8 43 115-159 262-319 (536)
132 2kl7_A Fibulin-4; secreted, ca 45.9 7.1 0.00024 25.3 1.1 13 151-163 54-66 (71)
133 1n1i_A Merozoite surface prote 45.1 4.8 0.00016 28.8 0.1 39 117-158 33-83 (105)
134 2jkh_L Factor X light chain; p 43.9 12 0.0004 22.8 1.9 18 75-92 14-31 (55)
135 1gl4_A Nidogen-1, entactin; im 43.3 9.2 0.00031 31.8 1.6 26 74-99 19-46 (285)
136 3tje_F Tumor necrosis factor r 40.7 17 0.00058 27.3 2.6 15 148-162 107-121 (156)
137 3asi_A Neurexin-1-alpha; beta- 40.5 13 0.00043 31.2 2.1 17 116-132 206-223 (410)
138 1ob1_C Major merozoite surface 35.3 7.4 0.00025 27.5 -0.2 11 117-127 27-37 (99)
139 2a55_A C4B-binding protein; co 31.1 1E+02 0.0034 21.5 5.4 11 153-163 92-102 (133)
140 2bz6_L Blood coagulation facto 29.8 27 0.00094 21.0 1.9 17 76-92 13-30 (53)
141 3qcw_A Neurexin-1-alpha; synap 28.5 33 0.0011 33.3 3.0 18 116-133 1038-1056(1245)
142 2jss_B Uncharacterized protein 27.8 18 0.00062 23.4 0.8 23 39-61 25-49 (62)
143 2pe4_A Hyaluronidase-1; hyalur 25.7 22 0.00075 31.2 1.1 17 117-133 398-414 (424)
144 3sov_A LRP-6, low-density lipo 22.4 38 0.0013 27.3 1.9 13 149-161 289-301 (318)
No 1
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.43 E-value=2.6e-14 Score=110.98 Aligned_cols=83 Identities=36% Similarity=0.744 Sum_probs=59.8
Q ss_pred eeceeEEEecCCCCCCCCCCCCCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccCCCCCCCCCCccCCCCceeCCCC
Q psy10880 78 SMLYEYRVTCDPHYYGNGCATLCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKALPNRTSRTLFCVLEPS 157 (166)
Q Consensus 78 ~l~~~~r~~C~~gyyG~~C~~~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~nG~C~~~~~C~C~~G 157 (166)
.+...++++|.++|+|..|+..|.+.....+|++|..+|+|+|.+||+|..|+.++|...+ .+.+|.|..+++|.|++|
T Consensus 12 ~~~~~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~~~C-~~~~g~C~~~~~C~C~~G 90 (169)
T 2vj2_A 12 SIEGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGC-SPKHGSCKLPGDCRCQYG 90 (169)
T ss_dssp ---------CCTTEETTTTCEECCCEEETTEEEEECSSCCEEECTTEESTTSCEECCCTTC-CTTTEECSSTTCCEECTT
T ss_pred ccccCeeeeCCCcCcCCCcccccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCCCCCCCC-CCCCcccCCCCeeECCCC
Confidence 3456778899999999999888887666778899988899999999999999887776432 224567877888888888
Q ss_pred CccC
Q psy10880 158 MQLY 161 (166)
Q Consensus 158 ~~G~ 161 (166)
|+|.
T Consensus 91 ~~G~ 94 (169)
T 2vj2_A 91 WQGL 94 (169)
T ss_dssp EESS
T ss_pred CCCC
Confidence 8876
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.16 E-value=3.9e-11 Score=89.33 Aligned_cols=92 Identities=17% Similarity=0.314 Sum_probs=62.3
Q ss_pred ccccceeeec--eeEEEecCCCCCCCCCCC---------------CCCCCCCCCCcccCC----------CCCCccCCCC
Q psy10880 71 EHKSAHSSML--YEYRVTCDPHYYGNGCAT---------------LCRPRDDSFGHYTCS----------HTGDRKCLPG 123 (166)
Q Consensus 71 ~~~~~~~~l~--~~~r~~C~~gyyG~~C~~---------------~C~p~~~~~ghy~C~----------~~G~c~C~~G 123 (166)
.+.+..+... .+|+|.|+++|.|..|+. .|.+.. ...+.+|. ..+.|+|++|
T Consensus 9 ~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~-C~~~g~C~~~~~~~~~~~~~~~C~C~~G 87 (143)
T 4d90_A 9 ENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNP-CHNGGTCEISEAYRGDTFIGYVCKCPRG 87 (143)
T ss_dssp GGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCC-CCTTCEEEECCCEETTEECCEEEECCTT
T ss_pred CCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCC-CCCCCEecCCCccccCCCCCeEeECcCC
Confidence 3445555443 478999999999999975 243321 22345665 1357899999
Q ss_pred CCCCCCCccccCCCCCCCCC-CccCC---CCceeCCCCCccCCCC
Q psy10880 124 WSGDYCTKAVQKLSPTKALP-NRTSR---TLFCVLEPSMQLYGNC 164 (166)
Q Consensus 124 wtG~~C~~~iC~~~c~~c~n-G~C~~---~~~C~C~~G~~G~~~~ 164 (166)
|+|..|++.+-.+...+|.+ +.|.. .|+|.|++||+|. ++
T Consensus 88 ~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~-~c 131 (143)
T 4d90_A 88 FNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGR-NC 131 (143)
T ss_dssp EESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBST-TS
T ss_pred CcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccC-Cc
Confidence 99999986664444445554 67763 4899999999998 44
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.11 E-value=5e-11 Score=88.87 Aligned_cols=94 Identities=20% Similarity=0.378 Sum_probs=68.3
Q ss_pred cccccceeeeceeEEEecCCCCCCCCCCC---CCCCCCCCCCcccCCC---CCCccCCCCCCCCCCCccccCCCCCCCCC
Q psy10880 70 DEHKSAHSSMLYEYRVTCDPHYYGNGCAT---LCRPRDDSFGHYTCSH---TGDRKCLPGWSGDYCTKAVQKLSPTKALP 143 (166)
Q Consensus 70 ~~~~~~~~~l~~~~r~~C~~gyyG~~C~~---~C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~C~~~iC~~~c~~c~n 143 (166)
..+.+..+....+|+|.|.++|+|..|.. .|.... ...+.+|.. .+.|+|.+||+|..|+..+-.+...+|.+
T Consensus 15 C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~-C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~ 93 (135)
T 2vj3_A 15 CEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNP-CQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLH 93 (135)
T ss_dssp SSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCC-CCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCSTT
T ss_pred CCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCC-CCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcCC
Confidence 44556777777889999999999999974 476432 233456753 24789999999999987663443445554
Q ss_pred -CccC---CCCceeCCCCCccCCCCC
Q psy10880 144 -NRTS---RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 144 -G~C~---~~~~C~C~~G~~G~~~~~ 165 (166)
+.|. ..|+|.|++||+|. .|+
T Consensus 94 ~g~C~~~~g~~~C~C~~G~~G~-~C~ 118 (135)
T 2vj3_A 94 NGRCLDKINEFQCECPTGFTGH-LCQ 118 (135)
T ss_dssp TCEEEECSSCEEEECCTTEESS-SSC
T ss_pred CCEeECCCCCeEEECCCCCcCC-ccC
Confidence 6776 35899999999997 553
No 4
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.09 E-value=1e-10 Score=99.53 Aligned_cols=77 Identities=23% Similarity=0.464 Sum_probs=62.7
Q ss_pred eEEEecCCCCCCCCCCC-CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccCCCCCCCC-CCccCCCCceeCCCCCc
Q psy10880 82 EYRVTCDPHYYGNGCAT-LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKAL-PNRTSRTLFCVLEPSMQ 159 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~-~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~-nG~C~~~~~C~C~~G~~ 159 (166)
.++|.|.+||+|..|+. .|.+ ....+++|...+.|+|.+||+|..|+...|.. +|+ +|.|...++|.|++||+
T Consensus 164 ~~~C~C~~G~~G~~C~~~~C~~--~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~---~C~~~G~C~~~~~C~C~~G~~ 238 (324)
T 2ygq_A 164 RRICECPDGFHGPHCEKALCTP--RCMNGGLCVTPGFCICPPGFYGVNCDKANCST---TCFNGGTCFYPGKCICPPGLE 238 (324)
T ss_dssp TSCEECCTTEESSSSCEESSSS--CCCTTCEECSSCCEECCTTCBTTTTCBCCCSS---CCCSSCCBSCSSCBCCCTTCC
T ss_pred CCeEECCCCCcCCCCCCCCCCC--CCCCCCEEcCCCEEeCCCCccCCCcccCcCCC---CCCCCCeeCCCCeeeCCCCcc
Confidence 47899999999999987 6765 34457889888999999999999999887753 344 47888889999999999
Q ss_pred cCCCC
Q psy10880 160 LYGNC 164 (166)
Q Consensus 160 G~~~~ 164 (166)
|. .|
T Consensus 239 G~-~C 242 (324)
T 2ygq_A 239 GE-QC 242 (324)
T ss_dssp TT-TT
T ss_pred CC-CC
Confidence 87 44
No 5
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.01 E-value=1.9e-10 Score=97.95 Aligned_cols=75 Identities=23% Similarity=0.403 Sum_probs=38.2
Q ss_pred eEEEecCCCCCCCCCCC-CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccCCCCCCCC-CCccCCCCceeCCCCCc
Q psy10880 82 EYRVTCDPHYYGNGCAT-LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKAL-PNRTSRTLFCVLEPSMQ 159 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~-~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~-nG~C~~~~~C~C~~G~~ 159 (166)
.++|.|.+||+|..|+. .|.. ...++++|...+.|+|.+||+|..|+...|. .+|+ +|.|...++|.|++||+
T Consensus 196 ~~~C~C~~G~~G~~C~~~~C~~--~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~---~~C~~~g~C~~~~~C~C~~G~~ 270 (324)
T 2ygq_A 196 PGFCICPPGFYGVNCDKANCST--TCFNGGTCFYPGKCICPPGLEGEQCEISKCP---QPCRNGGKCIGKSKCKCSKGYQ 270 (324)
T ss_dssp SCCEECCTTCBTTTTCBCCCSS--CCCSSCCBSCSSCBCCCTTCCTTTTC------------------------------
T ss_pred CCEEeCCCCccCCCcccCcCCC--CCCCCCeeCCCCeeeCCCCccCCCCCcCcCC---CcCCCCCEECCCCEEECCCCCc
Confidence 47899999999999986 5653 3445778877888999999999999876664 2344 35777778888888888
Q ss_pred cC
Q psy10880 160 LY 161 (166)
Q Consensus 160 G~ 161 (166)
|.
T Consensus 271 G~ 272 (324)
T 2ygq_A 271 GD 272 (324)
T ss_dssp --
T ss_pred CC
Confidence 76
No 6
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.94 E-value=4.2e-10 Score=87.06 Aligned_cols=46 Identities=37% Similarity=0.827 Sum_probs=22.7
Q ss_pred EEecCCCCCCCCCCC-CCCCCCCCCCcccCCCCCCccCCCCCCCCCCC
Q psy10880 84 RVTCDPHYYGNGCAT-LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCT 130 (166)
Q Consensus 84 r~~C~~gyyG~~C~~-~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~ 130 (166)
+|+|.++|+|..|+. .|.... ...|++|...+.|+|.+||+|..|+
T Consensus 51 ~C~C~~G~~G~~C~~~~C~~~C-~~~~g~C~~~~~C~C~~G~~G~~C~ 97 (169)
T 2vj2_A 51 NKTCMEGWMGPECNRAICRQGC-SPKHGSCKLPGDCRCQYGWQGLYCD 97 (169)
T ss_dssp CEEECTTEESTTSCEECCCTTC-CTTTEECSSTTCCEECTTEESSSSC
T ss_pred eeECCCCCcCCCCCCCCCCCCC-CCCCcccCCCCeeECCCCCCCCCcc
Confidence 346666666666654 344311 0124445444555555555555554
No 7
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.92 E-value=1.1e-10 Score=103.48 Aligned_cols=74 Identities=23% Similarity=0.413 Sum_probs=39.2
Q ss_pred EecCCCCCCCCCCC-CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccCCCCCCCCC-CccCCCCceeCCCCCccCC
Q psy10880 85 VTCDPHYYGNGCAT-LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKALP-NRTSRTLFCVLEPSMQLYG 162 (166)
Q Consensus 85 ~~C~~gyyG~~C~~-~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~n-G~C~~~~~C~C~~G~~G~~ 162 (166)
..|..+|+|..|.. .|... + .|++|...++|+|.+||+|.+|++..|.. +|+| |.|..+++|.|++||+|.
T Consensus 379 ~~C~~~~~g~~c~~~~C~~~--C-~nG~C~~~~~C~C~~G~~G~~C~~~~C~~---~C~~~g~C~~~~~C~C~~G~~G~- 451 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSRL--C-RNGYCTPTGKCCCSPGWEGDFCRTAKCEP---ACRHGGVCVRPNKCLCKKGYLGP- 451 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHHH--C-CSEEECTTSCEEECTTEESTTSCEECC-----------------------------
T ss_pred ccCCCCCcCCCCccccccCC--C-CCCccCCCCeECCCCCcCCCcCCcCcCCC---CCCCCCEECCCCEEECCCCcccC-
Confidence 58999999999987 56542 2 25799888999999999999999888875 5555 689888999999999998
Q ss_pred CCC
Q psy10880 163 NCA 165 (166)
Q Consensus 163 ~~~ 165 (166)
.|+
T Consensus 452 ~C~ 454 (463)
T 2wg3_C 452 QCE 454 (463)
T ss_dssp ---
T ss_pred CCC
Confidence 665
No 8
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.92 E-value=9.4e-10 Score=96.78 Aligned_cols=82 Identities=22% Similarity=0.420 Sum_probs=59.9
Q ss_pred ceeEEEecCCCCCCCCCCCCCCCCCCCCCcccCCC-CCCccCCCCCCCCCCCccc--------cCCC---CCCCCC-Ccc
Q psy10880 80 LYEYRVTCDPHYYGNGCATLCRPRDDSFGHYTCSH-TGDRKCLPGWSGDYCTKAV--------QKLS---PTKALP-NRT 146 (166)
Q Consensus 80 ~~~~r~~C~~gyyG~~C~~~C~p~~~~~ghy~C~~-~G~c~C~~GwtG~~C~~~i--------C~~~---c~~c~n-G~C 146 (166)
...+.|.|.++|+|..|+..|.| +.++++|.. .|.|+|.+||+|.+|+..+ |... ...|.+ +.|
T Consensus 182 ~~~~~c~C~~g~~G~~C~~~C~~---C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C 258 (423)
T 2gy5_A 182 TRLIVRRCEAQKWGPECNHLCTA---CMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC 258 (423)
T ss_dssp EEEEECSSCTTEESTTSCEECCC---CCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE
T ss_pred ccccCCcCCCCCCCCCCCCCCCC---CCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE
Confidence 34567899999999999987764 335789986 7999999999999998642 2211 112332 455
Q ss_pred C-CCCceeCCCCCccCCCCC
Q psy10880 147 S-RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 147 ~-~~~~C~C~~G~~G~~~~~ 165 (166)
. ..|+|.|++||+|. .|+
T Consensus 259 ~~~~~~C~C~~G~~G~-~C~ 277 (423)
T 2gy5_A 259 LPDPYGCSCATGWKGL-QCN 277 (423)
T ss_dssp ETTTTEEECCBTCBSG-GGC
T ss_pred CCCCCeEEeCCCcccc-ccc
Confidence 4 46999999999987 443
No 9
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.88 E-value=5.9e-10 Score=78.45 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=52.4
Q ss_pred eEEEecCCCCCCCCCCC-CCCCC--CCCCCcccCCCCCCccCCCCCCCCCCC-ccccCCCCCCCCC-CccC-----CCCc
Q psy10880 82 EYRVTCDPHYYGNGCAT-LCRPR--DDSFGHYTCSHTGDRKCLPGWSGDYCT-KAVQKLSPTKALP-NRTS-----RTLF 151 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~-~C~p~--~~~~ghy~C~~~G~c~C~~GwtG~~C~-~~iC~~~c~~c~n-G~C~-----~~~~ 151 (166)
+|+|.|.++|.|..|.. .|..+ ....+.|+| +|++||+ .|+ ..+-.+...+|+| |.|. ..|+
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~~~~y~C------~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~ 72 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYC------WCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFV 72 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSSSCEEEE------ECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEE
T ss_pred CeeeECCCCCcCCeECCCcccCCccccCCCCcEe------ECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeE
Confidence 58899999999998875 34322 122345666 9999998 897 3442333445665 6775 4589
Q ss_pred eeCCCCCccCCCCC
Q psy10880 152 CVLEPSMQLYGNCA 165 (166)
Q Consensus 152 C~C~~G~~G~~~~~ 165 (166)
|.|++||+|. .|+
T Consensus 73 C~C~~G~~G~-~Ce 85 (91)
T 1tpg_A 73 CQCPEGFAGK-SCE 85 (91)
T ss_dssp EECCTTCBSS-SCC
T ss_pred eECCCCCcCC-cCC
Confidence 9999999997 664
No 10
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.79 E-value=3.2e-09 Score=93.36 Aligned_cols=83 Identities=23% Similarity=0.439 Sum_probs=58.8
Q ss_pred eeEEEecCCCCCCCCCCCCCCC-------------CCCCCCcccCCC-CCCccCCCCCCCCCCCcc--------ccCCCC
Q psy10880 81 YEYRVTCDPHYYGNGCATLCRP-------------RDDSFGHYTCSH-TGDRKCLPGWSGDYCTKA--------VQKLSP 138 (166)
Q Consensus 81 ~~~r~~C~~gyyG~~C~~~C~p-------------~~~~~ghy~C~~-~G~c~C~~GwtG~~C~~~--------iC~~~c 138 (166)
..++|.|.+||+|..|+..|.+ ......+.+|.. .+.|.|.+||+|.+|+.. .|...
T Consensus 214 ~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~- 292 (423)
T 2gy5_A 214 DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLR- 292 (423)
T ss_dssp TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCB-
T ss_pred CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCccccc-
Confidence 4678999999999999875432 111222345543 689999999999999862 13222
Q ss_pred CCCCC-CccCCCCceeCCCCCccCCCCC
Q psy10880 139 TKALP-NRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 139 ~~c~n-G~C~~~~~C~C~~G~~G~~~~~ 165 (166)
++|++ |.|...+.|.|++||+|. .|+
T Consensus 293 C~C~ngg~C~~~~~C~C~~G~~G~-~Ce 319 (423)
T 2gy5_A 293 CSCNNGEMCDRFQGCLCSPGWQGL-QCE 319 (423)
T ss_dssp CCCTTCCEEETTTEEECCTTCBST-TSC
T ss_pred ccCCCCCEecCCCceECCCCCcCC-CCc
Confidence 25554 678877789999999997 564
No 11
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.77 E-value=3.8e-09 Score=98.20 Aligned_cols=89 Identities=19% Similarity=0.349 Sum_probs=61.5
Q ss_pred cceeeeceeEE---EecCCCCCCCCCCC-----------CCCCCC---CCCCcccCCCCCCccCC----CCCCCCCCCcc
Q psy10880 74 SAHSSMLYEYR---VTCDPHYYGNGCAT-----------LCRPRD---DSFGHYTCSHTGDRKCL----PGWSGDYCTKA 132 (166)
Q Consensus 74 ~~~~~l~~~~r---~~C~~gyyG~~C~~-----------~C~p~~---~~~ghy~C~~~G~c~C~----~GwtG~~C~~~ 132 (166)
+.+......+. |.|.+||+|..|+. .|.+.. .+.++++|. .|.|+|. +||+|.+|+..
T Consensus 446 ~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~~~~Gy~G~~Ce~~ 524 (690)
T 3fcs_B 446 HRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSSDFGKITGKYCECD 524 (690)
T ss_dssp TTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCCSSCCCBSTTSCBC
T ss_pred CcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecCCCCCeeCCCcCcc
Confidence 34443344555 99999999999964 266432 144678886 6999999 99999999754
Q ss_pred c--cCCC-CCCCC-CCccCCCCceeCCCCCccCCCCC
Q psy10880 133 V--QKLS-PTKAL-PNRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 133 i--C~~~-c~~c~-nG~C~~~~~C~C~~G~~G~~~~~ 165 (166)
+ |... ..+|+ +|.|.. |+|.|++||+|. .|+
T Consensus 525 ~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~-~Ce 559 (690)
T 3fcs_B 525 DFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGY-YCN 559 (690)
T ss_dssp SSCCCBSSSSBGGGSEEEET-TEEEECTTEESS-SSC
T ss_pred cCcCcCCCCCCCCCCCEecC-CeeECcCCCcCC-CCc
Confidence 3 4421 12344 356755 899999999987 443
No 12
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.57 E-value=2.5e-08 Score=92.73 Aligned_cols=80 Identities=23% Similarity=0.385 Sum_probs=58.5
Q ss_pred EEEecC------CCCCCCCCCC---CCCCC--CCCCC--cccCCCCCCccCCCCCCCCCCCcc----ccCCC-CCCCCC-
Q psy10880 83 YRVTCD------PHYYGNGCAT---LCRPR--DDSFG--HYTCSHTGDRKCLPGWSGDYCTKA----VQKLS-PTKALP- 143 (166)
Q Consensus 83 ~r~~C~------~gyyG~~C~~---~C~p~--~~~~g--hy~C~~~G~c~C~~GwtG~~C~~~----iC~~~-c~~c~n- 143 (166)
.+|.|. ++|+|..|+. .|... ..+.+ |++|. .|+|+|.+||+|.+|+.+ .|... ..+|++
T Consensus 493 G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~-~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~ 571 (687)
T 3k6s_B 493 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF-CGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGR 571 (687)
T ss_dssp TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEE-TTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSS
T ss_pred CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEE-CCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCC
Confidence 389999 9999999972 57642 11345 78885 589999999999999843 34431 224554
Q ss_pred CccCCCCceeCCCCCccCCCCC
Q psy10880 144 NRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 144 G~C~~~~~C~C~~G~~G~~~~~ 165 (166)
|.|.. ++|.|++||+|. .|+
T Consensus 572 G~C~~-g~C~C~~Gy~G~-~Ce 591 (687)
T 3k6s_B 572 GRCRC-NVCECHSGYQLP-LCQ 591 (687)
T ss_dssp CCBCS-SCBCCSTTCCTT-TTC
T ss_pred CcCCC-CEEECCCCCcCC-CCC
Confidence 66755 899999999998 665
No 13
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.55 E-value=2.3e-08 Score=92.92 Aligned_cols=81 Identities=25% Similarity=0.414 Sum_probs=58.2
Q ss_pred eEEEecC----CCCCCCCCCC---CCCCC--CCCCCcccCCCCCCccCCCCCCCCCCC----ccccCCC-CCCCCC-Ccc
Q psy10880 82 EYRVTCD----PHYYGNGCAT---LCRPR--DDSFGHYTCSHTGDRKCLPGWSGDYCT----KAVQKLS-PTKALP-NRT 146 (166)
Q Consensus 82 ~~r~~C~----~gyyG~~C~~---~C~p~--~~~~ghy~C~~~G~c~C~~GwtG~~C~----~~iC~~~-c~~c~n-G~C 146 (166)
.++|.|. ++|+|..|+. .|... ..+.+|++|.. |.|+|.+||+|.+|+ ...|... ..+|++ |.|
T Consensus 503 ~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C 581 (690)
T 3fcs_B 503 CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKC 581 (690)
T ss_dssp SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEE
T ss_pred CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEE
Confidence 3689999 9999999973 57642 12445788854 999999999999998 2334431 134554 567
Q ss_pred CCCCceeC-CCCCccCCCCC
Q psy10880 147 SRTLFCVL-EPSMQLYGNCA 165 (166)
Q Consensus 147 ~~~~~C~C-~~G~~G~~~~~ 165 (166)
.. ++|.| ++||+|. .|+
T Consensus 582 ~~-g~C~C~~~Gy~G~-~Ce 599 (690)
T 3fcs_B 582 EC-GSCVCIQPGSYGD-TCE 599 (690)
T ss_dssp ET-TEEECCSTTCBST-TSC
T ss_pred eC-CEEECCCCCccCC-CcC
Confidence 54 79999 9999997 554
No 14
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.55 E-value=1e-08 Score=83.11 Aligned_cols=80 Identities=23% Similarity=0.351 Sum_probs=57.0
Q ss_pred EEEecCCCCCCCCCCC------------CCCCC---CCCCCcccCCCCCCccCCCCC------CCCCCCccc--cCCC-C
Q psy10880 83 YRVTCDPHYYGNGCAT------------LCRPR---DDSFGHYTCSHTGDRKCLPGW------SGDYCTKAV--QKLS-P 138 (166)
Q Consensus 83 ~r~~C~~gyyG~~C~~------------~C~p~---~~~~ghy~C~~~G~c~C~~Gw------tG~~C~~~i--C~~~-c 138 (166)
.+|.|.++|+|..|+. .|... ....+|++|. .|.|+|.+|| +|.+|+..+ |... .
T Consensus 107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~-~g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g 185 (217)
T 2p28_B 107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIYGQYCECDTINCERYNG 185 (217)
T ss_dssp TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE-TTEEEECCCCSTTCCEESTTSCEESSCSCEETT
T ss_pred CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe-CCceECCCCCCCcccEECCCcccCCccCCCCCC
Confidence 5899999999999973 25421 2234678885 6899999995 999998543 4432 1
Q ss_pred CCCC-C--CccCCCCceeCCCCCccCCCCC
Q psy10880 139 TKAL-P--NRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 139 ~~c~-n--G~C~~~~~C~C~~G~~G~~~~~ 165 (166)
.+|+ + |.|. .++|.|.+||+|. .|+
T Consensus 186 ~~C~~~~~G~C~-~g~C~C~~G~~G~-~C~ 213 (217)
T 2p28_B 186 QVCGGPGRGLCF-CGKCRCHPGFEGS-ACQ 213 (217)
T ss_dssp EETTCTTTEEEE-TTEEEECTTEEST-TSC
T ss_pred CCCCCCCCcEEe-CCeeECCCCCccC-CcC
Confidence 1243 3 6675 4799999999998 554
No 15
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.42 E-value=4.7e-08 Score=90.89 Aligned_cols=81 Identities=21% Similarity=0.306 Sum_probs=58.5
Q ss_pred eEEEecCCCCCCCCCCC------------CCCCCC---CCCCcccCCCCCCccCC------CCCCCCCCCcc--ccCCC-
Q psy10880 82 EYRVTCDPHYYGNGCAT------------LCRPRD---DSFGHYTCSHTGDRKCL------PGWSGDYCTKA--VQKLS- 137 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~------------~C~p~~---~~~ghy~C~~~G~c~C~------~GwtG~~C~~~--iC~~~- 137 (166)
..+|.|.+||+|..|+. .|.+.. .+.+|++|. .|.|+|. +||+|.+|+.. .|...
T Consensus 445 ~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~ 523 (687)
T 3k6s_B 445 CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIYGQYCECDTINCERYN 523 (687)
T ss_dssp SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCCEESTTSCEESSCSCEET
T ss_pred CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCCccccccccccccccCCC
Confidence 35789999999999982 376432 145688886 7899999 99999999843 34421
Q ss_pred CCCCC---CCccCCCCceeCCCCCccCCCCC
Q psy10880 138 PTKAL---PNRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 138 c~~c~---nG~C~~~~~C~C~~G~~G~~~~~ 165 (166)
...|+ +|.|. .++|.|++||+|. .|+
T Consensus 524 ~~~C~~~~~G~C~-~g~C~C~~G~~G~-~Ce 552 (687)
T 3k6s_B 524 GQVCGGPGRGLCF-CGKCRCHPGFEGS-ACQ 552 (687)
T ss_dssp TEETSHHHHEEEE-TTEEEECTTCCST-TSC
T ss_pred CcCcCCCCCCeEE-CCEEEcCCCCcCC-CCc
Confidence 12344 35665 4799999999998 554
No 16
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.42 E-value=8.7e-08 Score=71.87 Aligned_cols=89 Identities=18% Similarity=0.294 Sum_probs=60.1
Q ss_pred cceeeeceeEEEecCCCCCCCCCCCCCCCCCC---------------------------CCC---cccCCC-CCCccCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYYGNGCATLCRPRDD---------------------------SFG---HYTCSH-TGDRKCLP 122 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyyG~~C~~~C~p~~~---------------------------~~g---hy~C~~-~G~c~C~~ 122 (166)
+..+.+..+|+|.|+++|.|..+...|..... ..+ .+.|.. ...|+|++
T Consensus 15 g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~ 94 (147)
T 2w86_A 15 GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDPICGK 94 (147)
T ss_dssp SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTEECCCCTTTCT
T ss_pred CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcccCCCcccCCC
Confidence 56788888999999999998877655532110 000 011111 14669999
Q ss_pred CCC---CCCCCccc--cCCCCCCCCCCccCC---CCceeCCCCCccCCC
Q psy10880 123 GWS---GDYCTKAV--QKLSPTKALPNRTSR---TLFCVLEPSMQLYGN 163 (166)
Q Consensus 123 Gwt---G~~C~~~i--C~~~c~~c~nG~C~~---~~~C~C~~G~~G~~~ 163 (166)
||+ |..|. .| |...+.+|+++.|.+ .|+|.|++||+|.+.
T Consensus 95 Gy~~~~g~~C~-dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 95 GYSRIKGTQCE-DIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp TEEEEETTEEE-ECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTT
T ss_pred ccccCCCCccC-ccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCC
Confidence 995 99996 34 554455566677863 499999999999853
No 17
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.37 E-value=4.4e-08 Score=76.09 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=62.5
Q ss_pred cccccceeeec-----eeEEEecCCCCCCCCCC---CCCCCCCCCCCcccCC----C---CCCccCCCCCCC-----CCC
Q psy10880 70 DEHKSAHSSML-----YEYRVTCDPHYYGNGCA---TLCRPRDDSFGHYTCS----H---TGDRKCLPGWSG-----DYC 129 (166)
Q Consensus 70 ~~~~~~~~~l~-----~~~r~~C~~gyyG~~C~---~~C~p~~~~~ghy~C~----~---~G~c~C~~GwtG-----~~C 129 (166)
..+.+..+.+. .+|+|.|.+||.|..|. ..|.... ...+.+|. . ...|+|.+||+| ..|
T Consensus 56 C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~-C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C 134 (186)
T 1z1y_A 56 CGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXN-CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXC 134 (186)
T ss_dssp EETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCC-CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEE
T ss_pred CCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCC-CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcc
Confidence 33446677776 79999999999998663 2465432 33356775 2 248899999999 788
Q ss_pred Ccc-ccCCCCCCC-C-CCccC---CCCceeCCCCCccCC
Q psy10880 130 TKA-VQKLSPTKA-L-PNRTS---RTLFCVLEPSMQLYG 162 (166)
Q Consensus 130 ~~~-iC~~~c~~c-~-nG~C~---~~~~C~C~~G~~G~~ 162 (166)
... +..+. .+| . ++.|. ..|+|.|++||+|.+
T Consensus 135 ~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g~~ 172 (186)
T 1z1y_A 135 TXTGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTFDX 172 (186)
T ss_dssp EEEECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEEET
T ss_pred eEcCCCccc-ccccccCcceecCCCCeeeECCCCCccCc
Confidence 754 22222 255 3 46776 348999999999984
No 18
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.37 E-value=3.5e-08 Score=72.09 Aligned_cols=83 Identities=17% Similarity=0.326 Sum_probs=55.8
Q ss_pred ceeee-ceeEEEecCCCCCCCCC-----CCCCCCCCCCCCcccCCC--CCCccCCCCCC---CCCCCccc--cCCCCCCC
Q psy10880 75 AHSSM-LYEYRVTCDPHYYGNGC-----ATLCRPRDDSFGHYTCSH--TGDRKCLPGWS---GDYCTKAV--QKLSPTKA 141 (166)
Q Consensus 75 ~~~~l-~~~~r~~C~~gyyG~~C-----~~~C~p~~~~~ghy~C~~--~G~c~C~~Gwt---G~~C~~~i--C~~~c~~c 141 (166)
..+.+ ..+|+|.|++||.|..+ ...|.... . ..+|.. ...|+|++||+ |..|. .| |.. ..+|
T Consensus 15 ~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~-C--~~~C~~~~~y~C~C~~Gy~~~~g~~C~-dideC~~-~~~C 89 (118)
T 1dx5_I 15 QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTA-C--PADCDPNTQASCECPEGYILDDGFICT-DIDECEN-GGFC 89 (118)
T ss_dssp EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSE-E--ECEECTTSTTCEECCTTEEEETTTEEE-ECCHHHH-CSSC
T ss_pred CCCCCCCCCEEeECCCCccccCCCCCccccccCCCC-C--CCcccCCCCeEeECCCCccCCCCCccc-cccccCC-CCCC
Confidence 46666 67899999999999854 33343211 0 123433 34679999999 88994 34 443 1455
Q ss_pred CCCccC---CCCceeCCCCCccCCC
Q psy10880 142 LPNRTS---RTLFCVLEPSMQLYGN 163 (166)
Q Consensus 142 ~nG~C~---~~~~C~C~~G~~G~~~ 163 (166)
++.|. ..|+|.|++||+|.+.
T Consensus 90 -~~~C~n~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 90 -SGVCHNLPGTFECICGPDSALAGQ 113 (118)
T ss_dssp -SSEEEECSSSEEEEECSSSSCEEE
T ss_pred -cCeEEeCCCCEEEECCCCCccCCC
Confidence 56775 3599999999998764
No 19
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.32 E-value=3.3e-07 Score=84.52 Aligned_cols=93 Identities=16% Similarity=0.211 Sum_probs=62.6
Q ss_pred cccccceeeece-eEEE-ecCCCCCC--CCCCC--CCCCCCC-CCCcc---cCCC---CCCcc-CCCCCCCCCCC-----
Q psy10880 70 DEHKSAHSSMLY-EYRV-TCDPHYYG--NGCAT--LCRPRDD-SFGHY---TCSH---TGDRK-CLPGWSGDYCT----- 130 (166)
Q Consensus 70 ~~~~~~~~~l~~-~~r~-~C~~gyyG--~~C~~--~C~p~~~-~~ghy---~C~~---~G~c~-C~~GwtG~~C~----- 130 (166)
..+.+.++.+.. +|+| .|++||.| ..|.. .|..... +..+. +|.. ..+|. |++||+|..|.
T Consensus 11 C~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~ 90 (634)
T 1yo8_A 11 CFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLE 90 (634)
T ss_dssp SCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSH
T ss_pred CCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccccccc
Confidence 445567777764 5999 99999998 78874 5764331 22223 5653 24788 99999999875
Q ss_pred ---------ccc--cCCCCCCCCC-CccC-------CCCceeCCCCCccCC
Q psy10880 131 ---------KAV--QKLSPTKALP-NRTS-------RTLFCVLEPSMQLYG 162 (166)
Q Consensus 131 ---------~~i--C~~~c~~c~n-G~C~-------~~~~C~C~~G~~G~~ 162 (166)
+.+ |.....+|.+ +.|. ..|+|.|++||+|.|
T Consensus 91 ~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG 141 (634)
T 1yo8_A 91 AAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDG 141 (634)
T ss_dssp HHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESS
T ss_pred ccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccC
Confidence 122 5443456654 5675 348999999999965
No 20
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.31 E-value=2.5e-08 Score=77.50 Aligned_cols=85 Identities=11% Similarity=0.126 Sum_probs=58.1
Q ss_pred cceeeeceeEEEecCCCCCCC---CCCC--CCCCC---CCCCCcccCCCC--------CCccCCCCCCCCCC--CccccC
Q psy10880 74 SAHSSMLYEYRVTCDPHYYGN---GCAT--LCRPR---DDSFGHYTCSHT--------GDRKCLPGWSGDYC--TKAVQK 135 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyyG~---~C~~--~C~p~---~~~~ghy~C~~~--------G~c~C~~GwtG~~C--~~~iC~ 135 (166)
|..+.+..+|+|.|.+||.|. .|.. .|... .....+.+|... ..|+|.+||+|..| .+..|.
T Consensus 16 g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~ 95 (186)
T 1z1y_A 16 GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQ 95 (186)
T ss_dssp EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGT
T ss_pred CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCc
Confidence 367777889999999999987 7754 46521 111223566432 26799999999855 333455
Q ss_pred CCCCCCC-CCccC----C---CCceeCCCCCcc
Q psy10880 136 LSPTKAL-PNRTS----R---TLFCVLEPSMQL 160 (166)
Q Consensus 136 ~~c~~c~-nG~C~----~---~~~C~C~~G~~G 160 (166)
.. +|. ++.|. . .|+|.|++||+|
T Consensus 96 ~~--~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 96 YX--NCGESGECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp TC--CCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred CC--CCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence 44 455 46776 3 489999999999
No 21
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.30 E-value=3.8e-07 Score=81.40 Aligned_cols=80 Identities=20% Similarity=0.350 Sum_probs=30.9
Q ss_pred ecCCCCCCCCCCC--CCCCC-----CCCCCcccCCC-CCCccCCCCCCCCCCCcc----------ccCCCCCCCCCC-c-
Q psy10880 86 TCDPHYYGNGCAT--LCRPR-----DDSFGHYTCSH-TGDRKCLPGWSGDYCTKA----------VQKLSPTKALPN-R- 145 (166)
Q Consensus 86 ~C~~gyyG~~C~~--~C~p~-----~~~~ghy~C~~-~G~c~C~~GwtG~~C~~~----------iC~~~c~~c~nG-~- 145 (166)
+|.+||||..|.. .|.+. ....+...|+. .|.|+|.+||+|.+|++- +-.+.+++|+++ .
T Consensus 422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~ 501 (525)
T 4aqs_A 422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGAL 501 (525)
T ss_dssp EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--------------------------
T ss_pred CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCcc
Confidence 5777787777664 24322 11223456765 689999999999999741 111233445543 3
Q ss_pred ---cC-CCCceeCCCCCccCCCCCC
Q psy10880 146 ---TS-RTLFCVLEPSMQLYGNCAK 166 (166)
Q Consensus 146 ---C~-~~~~C~C~~G~~G~~~~~~ 166 (166)
|. ..++|.|++||+|. .|++
T Consensus 502 ~~~C~~~tG~C~C~~G~~G~-~Ceq 525 (525)
T 4aqs_A 502 NNSCSEDSGQCSCLPHMIGR-QCNE 525 (525)
T ss_dssp -------------------------
T ss_pred CCccCCCCCeeECCCCCcCC-CCCC
Confidence 32 24799999999998 6653
No 22
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.24 E-value=1.5e-06 Score=66.88 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=52.7
Q ss_pred eeEEE-ecCCCCCCCCCCCCCCCC-----------------CCCCCc------ccCCC-CCCcc-CCCCCCCCCCCcccc
Q psy10880 81 YEYRV-TCDPHYYGNGCATLCRPR-----------------DDSFGH------YTCSH-TGDRK-CLPGWSGDYCTKAVQ 134 (166)
Q Consensus 81 ~~~r~-~C~~gyyG~~C~~~C~p~-----------------~~~~gh------y~C~~-~G~c~-C~~GwtG~~C~~~iC 134 (166)
..++| .|.++|.|..|++ |.+. ....+| .+|++ +|+|+ |.+||+|.+|++ |
T Consensus 16 g~~~C~~C~~g~~G~~Ce~-C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~--C 92 (162)
T 1klo_A 16 KEVVCTHCPTGTAGKRCEL-CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR--C 92 (162)
T ss_dssp CCEEECSCCTTEESTTSCE-ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE--E
T ss_pred CCEEeCCCCCCCcCCCCcC-CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc--C
Confidence 46788 6999999999975 3321 011223 46875 79995 999999999985 2
Q ss_pred CC---------------CCCCCCC-C------ccCC-CCceeCCCCCccC
Q psy10880 135 KL---------------SPTKALP-N------RTSR-TLFCVLEPSMQLY 161 (166)
Q Consensus 135 ~~---------------~c~~c~n-G------~C~~-~~~C~C~~G~~G~ 161 (166)
+. ..+.|++ | .|.. .++|.|++||+|.
T Consensus 93 ~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~ 142 (162)
T 1klo_A 93 KEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGR 142 (162)
T ss_dssp CTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEEST
T ss_pred chhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCC
Confidence 11 1233433 2 5654 6999999999987
No 23
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.08 E-value=2.5e-07 Score=70.43 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.2
Q ss_pred cceeeeceeEEEecCCCCC----CCCCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYY----GNGCAT 98 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyy----G~~C~~ 98 (166)
+..+.+..+|+|.|++||. |..|..
T Consensus 15 ~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d 43 (162)
T 1uzk_A 15 GNCVNTPGSYICDCPPDFELNPTRVGCVD 43 (162)
T ss_dssp SEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred CEeECCCCCEEEeCCCCCeECCCCCcccC
Confidence 5678888899999999998 788864
No 24
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.04 E-value=4.3e-07 Score=67.66 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=52.3
Q ss_pred eEEEecCCCCCC---------CCCCC--CCCCCC--CCCCcccCCC---CCCccCCCCCCCCCCCc-----------cc-
Q psy10880 82 EYRVTCDPHYYG---------NGCAT--LCRPRD--DSFGHYTCSH---TGDRKCLPGWSGDYCTK-----------AV- 133 (166)
Q Consensus 82 ~~r~~C~~gyyG---------~~C~~--~C~p~~--~~~ghy~C~~---~G~c~C~~GwtG~~C~~-----------~i- 133 (166)
.|+|.|.+||.| ..|.. .|.... ....+.+|.. ...|+|.+||+|..+.. .|
T Consensus 18 ~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~did 97 (143)
T 2bou_A 18 ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVD 97 (143)
T ss_dssp SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECC
T ss_pred CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCcc
Confidence 389999999998 46743 465431 1223456653 24789999999874431 22
Q ss_pred -cCCCCCCCCC-CccC---CCCceeCCCCCccCC
Q psy10880 134 -QKLSPTKALP-NRTS---RTLFCVLEPSMQLYG 162 (166)
Q Consensus 134 -C~~~c~~c~n-G~C~---~~~~C~C~~G~~G~~ 162 (166)
|.....+|.+ +.|. ..|+|.|++||+|.-
T Consensus 98 eC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~ 131 (143)
T 2bou_A 98 ECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131 (143)
T ss_dssp HHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred CccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence 4433345554 6776 358999999999974
No 25
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.96 E-value=3.5e-06 Score=62.30 Aligned_cols=62 Identities=19% Similarity=0.500 Sum_probs=46.4
Q ss_pred ccccceeeeceeEEEecCCCCCCCCCCC---CCCCCCCCCCcccCCC---CCCccCCCCCCCCCCCccc
Q psy10880 71 EHKSAHSSMLYEYRVTCDPHYYGNGCAT---LCRPRDDSFGHYTCSH---TGDRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 71 ~~~~~~~~l~~~~r~~C~~gyyG~~C~~---~C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~C~~~i 133 (166)
...+..+.....|+|.|.++|.|..|.. .|.+.. ...+++|.. .+.|+|++||+|.+|++.+
T Consensus 54 ~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~-C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 54 QNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSP-CLHNGRCLDKINEFQCECPTGFTGHLCQVDL 121 (135)
T ss_dssp CSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCC-STTTCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred CCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCC-cCCCCEeECCCCCeEEECCCCCcCCccCccC
Confidence 3445677777889999999999999974 476432 233466753 2478999999999998766
No 26
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.87 E-value=8.9e-06 Score=58.67 Aligned_cols=52 Identities=25% Similarity=0.454 Sum_probs=31.5
Q ss_pred cccCCC---CCCccCCCCCCCCCCCccc----cCCCCCCCCCCccC---CCCceeCCCCCccC
Q psy10880 109 HYTCSH---TGDRKCLPGWSGDYCTKAV----QKLSPTKALPNRTS---RTLFCVLEPSMQLY 161 (166)
Q Consensus 109 hy~C~~---~G~c~C~~GwtG~~C~~~i----C~~~c~~c~nG~C~---~~~~C~C~~G~~G~ 161 (166)
+++|.. .+.|.|++||+|..|+..+ |......|++ .|. ..|+|.|++||+|.
T Consensus 25 ~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~ 86 (114)
T 1aut_L 25 HGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLG 86 (114)
T ss_dssp SEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEEC
T ss_pred cCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeEC
Confidence 345543 2466899999999887653 2211111221 454 34889999999865
No 27
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.86 E-value=8.4e-06 Score=60.14 Aligned_cols=48 Identities=15% Similarity=0.324 Sum_probs=33.8
Q ss_pred CCccCCCCCCCCCCCccc------------cCCCCCCCCC-CccC----------CCCceeCCCCCccCCCC
Q psy10880 116 GDRKCLPGWSGDYCTKAV------------QKLSPTKALP-NRTS----------RTLFCVLEPSMQLYGNC 164 (166)
Q Consensus 116 G~c~C~~GwtG~~C~~~i------------C~~~c~~c~n-G~C~----------~~~~C~C~~G~~G~~~~ 164 (166)
..|+|++||+|..|+..+ -.+...+|.+ +.|. ..|+|.|++||+|. .|
T Consensus 23 ~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~-~C 93 (143)
T 4d90_A 23 FSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI-HC 93 (143)
T ss_dssp CEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEEST-TS
T ss_pred EEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCC-Cc
Confidence 356999999999997622 1122344554 5776 25899999999987 44
No 28
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.76 E-value=1.2e-05 Score=64.95 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=36.6
Q ss_pred CCCcccCCCCCCccCCCCCCCCCCCccc-----------cCCC--CCCCCC-CccCCCCceeCCCCC
Q psy10880 106 SFGHYTCSHTGDRKCLPGWSGDYCTKAV-----------QKLS--PTKALP-NRTSRTLFCVLEPSM 158 (166)
Q Consensus 106 ~~ghy~C~~~G~c~C~~GwtG~~C~~~i-----------C~~~--c~~c~n-G~C~~~~~C~C~~G~ 158 (166)
..+|++|. .|.|+|.+||+|.+|+.+. |... ..+|++ |.|. .++|.|++||
T Consensus 98 Csg~G~C~-~g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~-~g~C~C~~gw 162 (217)
T 2p28_B 98 CHGKGFLE-CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSD 162 (217)
T ss_dssp TTTSEEEE-TTEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE-TTEEEECCCC
T ss_pred cCCCceEE-CCEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe-CCceECCCCC
Confidence 34678885 4999999999999998553 3321 233443 5665 5899999996
No 29
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.75 E-value=9e-06 Score=55.52 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=33.7
Q ss_pred CCccCCCCCC--CCCCCc-cccCCCCCCCCCCccC---CCCceeCCCCCccCCC
Q psy10880 116 GDRKCLPGWS--GDYCTK-AVQKLSPTKALPNRTS---RTLFCVLEPSMQLYGN 163 (166)
Q Consensus 116 G~c~C~~Gwt--G~~C~~-~iC~~~c~~c~nG~C~---~~~~C~C~~G~~G~~~ 163 (166)
..|.|++||+ |..|.. ..|.. ..+|.++.|. ..|+|.|++||+|.+.
T Consensus 26 y~C~C~~Gy~~~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 26 YRCECPFGYILAGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp CCEECCTTEEEETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred EEEECCCCeECCCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 3559999997 888942 22442 3455667776 3589999999999864
No 30
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.70 E-value=1.3e-05 Score=59.45 Aligned_cols=62 Identities=21% Similarity=0.436 Sum_probs=42.6
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCccCCCCCCC---------CCCC-ccccCCCC-CCCCC-CccC---CCCceeCCCCC
Q psy10880 94 NGCATLCRPRDDSFGHYTCSHTGDRKCLPGWSG---------DYCT-KAVQKLSP-TKALP-NRTS---RTLFCVLEPSM 158 (166)
Q Consensus 94 ~~C~~~C~p~~~~~ghy~C~~~G~c~C~~GwtG---------~~C~-~~iC~~~c-~~c~n-G~C~---~~~~C~C~~G~ 158 (166)
..|...|.. +.+|...+.|+|++||+| ..|. +..|.... .+|.+ +.|. ..|+|.|++||
T Consensus 3 ~~C~~~C~~------~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy 76 (143)
T 2bou_A 3 RGCARWCPQ------DSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY 76 (143)
T ss_dssp CCCCTTCCT------TEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred CCCcCcCCC------CCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence 456666764 567877788899999998 5783 23355431 24554 5776 35899999999
Q ss_pred ccC
Q psy10880 159 QLY 161 (166)
Q Consensus 159 ~G~ 161 (166)
+|.
T Consensus 77 ~g~ 79 (143)
T 2bou_A 77 EPV 79 (143)
T ss_dssp EET
T ss_pred ccC
Confidence 986
No 31
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.63 E-value=9.8e-06 Score=71.71 Aligned_cols=48 Identities=25% Similarity=0.587 Sum_probs=16.2
Q ss_pred EEEecCCCCCCCCCCC-CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCcc
Q psy10880 83 YRVTCDPHYYGNGCAT-LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKA 132 (166)
Q Consensus 83 ~r~~C~~gyyG~~C~~-~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~ 132 (166)
++|.|.++|.|..|+. .|.+ .+..+++|...+.|.|.+||+|.+|+..
T Consensus 408 ~~C~C~~G~~G~~C~~~~C~~--~C~~~g~C~~~~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 408 GKCCCSPGWEGDFCRTAKCEP--ACRHGGVCVRPNKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp SCEEECTTEESTTSCEECC--------------------------------
T ss_pred CeECCCCCcCCCcCCcCcCCC--CCCCCCEECCCCEEECCCCcccCCCCCC
Confidence 5899999999999986 7876 3445789988899999999999999874
No 32
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.60 E-value=2.6e-05 Score=58.35 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=29.0
Q ss_pred CccCCCCCCCCCCCccccCCCCCCCCCC----ccC---C-CCceeCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKAVQKLSPTKALPN----RTS---R-TLFCVLEPSMQL 160 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~iC~~~c~~c~nG----~C~---~-~~~C~C~~G~~G 160 (166)
.|+|++||+|..|+..+-.+..+++.++ .|. . .|+|.|++||++
T Consensus 69 ~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l 120 (142)
T 2c4f_L 69 ICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL 120 (142)
T ss_dssp EEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEE
T ss_pred EeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceE
Confidence 4489999999999864423222333333 343 3 689999999993
No 33
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.57 E-value=4.6e-05 Score=67.32 Aligned_cols=80 Identities=9% Similarity=0.244 Sum_probs=22.6
Q ss_pred eceeEEEecCCCCCCCCCCCCCCCCCC--CCCcccC-----CCCCCcc-CCCCCCCCCCCccccCCCCCCCCC-CccCCC
Q psy10880 79 MLYEYRVTCDPHYYGNGCATLCRPRDD--SFGHYTC-----SHTGDRK-CLPGWSGDYCTKAVQKLSPTKALP-NRTSRT 149 (166)
Q Consensus 79 l~~~~r~~C~~gyyG~~C~~~C~p~~~--~~ghy~C-----~~~G~c~-C~~GwtG~~C~~~iC~~~c~~c~n-G~C~~~ 149 (166)
....++|.|..++.|+.|++ |.|.-. ...++++ ...+.|+ |.-++.|..|+... .+|+| |.|...
T Consensus 309 ~~g~~~C~C~~~ttG~~CE~-C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~C~ngg~C~~~ 382 (426)
T 3zyj_B 309 DNSKLTCECEHNTTGPDCGK-CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL-----LHCQNGGTCHNN 382 (426)
T ss_dssp ETTEEEECCCTTEESSSSCE-ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC----------------------------
T ss_pred CCCCceeeCCCCCcCCCccc-cccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc-----ccCCCCCCcCCC
Confidence 33457899999999999985 544210 0111121 1123443 44445566775533 24444 456654
Q ss_pred CceeCCCCCccCCCCC
Q psy10880 150 LFCVLEPSMQLYGNCA 165 (166)
Q Consensus 150 ~~C~C~~G~~G~~~~~ 165 (166)
.+|.|++||+|. +|+
T Consensus 383 ~~C~C~~G~~G~-~Ce 397 (426)
T 3zyj_B 383 VRCLCPAAYTGI-LCE 397 (426)
T ss_dssp ----------------
T ss_pred CCCcCCCCCcCC-CCc
Confidence 588888888886 453
No 34
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.56 E-value=2.8e-05 Score=50.18 Aligned_cols=39 Identities=10% Similarity=0.099 Sum_probs=28.4
Q ss_pred CCCCCccccCCCCCCCCC-CccC--------CCCceeCCCCCccCCCCC
Q psy10880 126 GDYCTKAVQKLSPTKALP-NRTS--------RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 126 G~~C~~~iC~~~c~~c~n-G~C~--------~~~~C~C~~G~~G~~~~~ 165 (166)
|+.|.+.+-.+...||+| |.|. ..|+|.|++||+|. .|+
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~-~CE 48 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD-RCQ 48 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST-TSC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC-CcC
Confidence 677888876666777776 5772 35899999999998 665
No 35
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.56 E-value=8.8e-05 Score=61.34 Aligned_cols=45 Identities=20% Similarity=0.345 Sum_probs=31.7
Q ss_pred CCccCCCCCCCCCCCccccCCCC---CCCCCCccC---CCCceeCCCCCccC
Q psy10880 116 GDRKCLPGWSGDYCTKAVQKLSP---TKALPNRTS---RTLFCVLEPSMQLY 161 (166)
Q Consensus 116 G~c~C~~GwtG~~C~~~iC~~~c---~~c~nG~C~---~~~~C~C~~G~~G~ 161 (166)
..|.|++||+|.+|+..+-.+.. .+|.+ .|. ..|+|.|++||+|.
T Consensus 26 ~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 26 YTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp CCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECC
T ss_pred eEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEecccccccc
Confidence 34589999999999755533322 55655 665 35899999999874
No 36
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.56 E-value=5.1e-05 Score=57.26 Aligned_cols=61 Identities=15% Similarity=0.367 Sum_probs=38.2
Q ss_pred cccccceeeeceeEEEecCCCCCCCCCCC--CCCCCCCCCCcccC-CC---CCCccCCCCCC----CCCCCc
Q psy10880 70 DEHKSAHSSMLYEYRVTCDPHYYGNGCAT--LCRPRDDSFGHYTC-SH---TGDRKCLPGWS----GDYCTK 131 (166)
Q Consensus 70 ~~~~~~~~~l~~~~r~~C~~gyyG~~C~~--~C~p~~~~~ghy~C-~~---~G~c~C~~Gwt----G~~C~~ 131 (166)
..+.+..+.+..+|+|.|++||.|..|.. .|........+ +| .. ...|.|++||+ |..|..
T Consensus 56 C~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 56 CLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp SCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred CCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence 34445666667778888888888888865 46542111122 56 32 34678888887 777754
No 37
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.48 E-value=1.4e-05 Score=63.71 Aligned_cols=42 Identities=17% Similarity=0.328 Sum_probs=17.7
Q ss_pred CccCCCCCCCCCCCccc---cCCCCCCCCCCccC---CCCceeCCCCCc
Q psy10880 117 DRKCLPGWSGDYCTKAV---QKLSPTKALPNRTS---RTLFCVLEPSMQ 159 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i---C~~~c~~c~nG~C~---~~~~C~C~~G~~ 159 (166)
.|.|++||+|.+|...+ |.....+|.+ .|. ..|+|.|++||+
T Consensus 64 ~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 64 TCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp -----------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEE
T ss_pred eEeCCCCceeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCce
Confidence 45999999999998754 6654445554 665 348999999999
No 38
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.47 E-value=1.4e-06 Score=72.72 Aligned_cols=86 Identities=6% Similarity=-0.187 Sum_probs=55.6
Q ss_pred cccccceeeeceeEEEecCCCCCCCCCCC---CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccCCCCCCCCCCcc
Q psy10880 70 DEHKSAHSSMLYEYRVTCDPHYYGNGCAT---LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKALPNRT 146 (166)
Q Consensus 70 ~~~~~~~~~l~~~~r~~C~~gyyG~~C~~---~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~nG~C 146 (166)
....+..+....+|+|.|+++|.|..|+. .|....... ...|. .+..++.|.+|++.++.....+.++|.|
T Consensus 107 C~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~-s~pC~-----ngg~c~~G~~c~~~i~c~~~~c~ngg~C 180 (267)
T 4fbr_A 107 SNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGS-AAPWH-----SGGVWVLGTRGKQNVINVDAKSNDGGKT 180 (267)
T ss_dssp CSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSST-TSCCE-----EEEEEECCSSTTSCEEEEEEECSSTTSE
T ss_pred CCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcC-Ccccc-----CCcceecccccccccccCCCCCCCCCEe
Confidence 34457778888999999999999999986 243221100 11121 2223355888888775444334445677
Q ss_pred C---CCCceeCCCCCccC
Q psy10880 147 S---RTLFCVLEPSMQLY 161 (166)
Q Consensus 147 ~---~~~~C~C~~G~~G~ 161 (166)
. ..|+|.||+||+|.
T Consensus 181 ~dg~~~y~C~Cp~Gf~G~ 198 (267)
T 4fbr_A 181 LSGTMTYNGEGPIGFRGT 198 (267)
T ss_dssp EEEEEEETTSCCEEEEEE
T ss_pred eCCCCCeEEeCCCCcccc
Confidence 5 35999999999885
No 39
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.42 E-value=1.8e-05 Score=58.72 Aligned_cols=43 Identities=19% Similarity=0.351 Sum_probs=17.6
Q ss_pred CccCCCCCCCCCCCccc---cCCCCCCCCCCccC---CCCceeCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKAV---QKLSPTKALPNRTS---RTLFCVLEPSMQL 160 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i---C~~~c~~c~nG~C~---~~~~C~C~~G~~G 160 (166)
.|.|++||+|..|...+ |.....+|++ .|. ..|+|.|++||++
T Consensus 64 ~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l 112 (134)
T 2vh0_B 64 TCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTL 112 (134)
T ss_dssp -----------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEE
T ss_pred EeeCCCCccCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEE
Confidence 45999999999998754 6554444544 565 3489999999993
No 40
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.37 E-value=3.7e-05 Score=52.70 Aligned_cols=46 Identities=22% Similarity=0.288 Sum_probs=30.9
Q ss_pred ccCCCCCC-----CCCCCc-cccCCCCCCCCCCccCC---CCceeCCCCCccCCC
Q psy10880 118 RKCLPGWS-----GDYCTK-AVQKLSPTKALPNRTSR---TLFCVLEPSMQLYGN 163 (166)
Q Consensus 118 c~C~~Gwt-----G~~C~~-~iC~~~c~~c~nG~C~~---~~~C~C~~G~~G~~~ 163 (166)
|.|++||+ |..|.. .-|...+..|+++.|.+ .|+|.|++||+|...
T Consensus 27 C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 27 CKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPN 81 (86)
T ss_dssp ECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSS
T ss_pred eeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCC
Confidence 37888887 667742 12544444555677763 489999999998743
No 41
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.35 E-value=7e-05 Score=56.50 Aligned_cols=43 Identities=14% Similarity=0.363 Sum_probs=31.2
Q ss_pred CccCCCCCCCCCCCcc-ccCCCCCCCCCCcc-C---CCCceeCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKA-VQKLSPTKALPNRT-S---RTLFCVLEPSMQL 160 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~-iC~~~c~~c~nG~C-~---~~~~C~C~~G~~G 160 (166)
.|.|++||+|..|+.. .|.....+|.+ .| . ..|+|.|++||++
T Consensus 70 ~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l 117 (146)
T 1x7a_L 70 ECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRL 117 (146)
T ss_dssp EEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEE
T ss_pred EEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEe
Confidence 5699999999999764 24433334444 67 4 3599999999994
No 42
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.33 E-value=0.00016 Score=57.45 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=22.1
Q ss_pred CCcccCCCCCCccCCCCCCCCCCCccc
Q psy10880 107 FGHYTCSHTGDRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 107 ~ghy~C~~~G~c~C~~GwtG~~C~~~i 133 (166)
.++++|..++.|.|++||+|.+|++..
T Consensus 156 ~ngG~Cv~P~~C~C~~Gw~G~~C~~~~ 182 (188)
T 2ygo_A 156 RNGGFCNERRICECPDGFHGPHCEGTK 182 (188)
T ss_dssp CTTCEECTTSCEECCTTCBTTTTCBC-
T ss_pred CCCCEeCCCCcccCcCCCCCCCCcCCc
Confidence 447889889999999999999998753
No 43
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.31 E-value=4.1e-05 Score=55.04 Aligned_cols=73 Identities=19% Similarity=0.344 Sum_probs=24.7
Q ss_pred ecCCCCCCCCCCC-CCCCCCCCCCcccCCC---CCCccCCCCCCC---CCCCccc--cCCCCCCCCCCccCC---CCcee
Q psy10880 86 TCDPHYYGNGCAT-LCRPRDDSFGHYTCSH---TGDRKCLPGWSG---DYCTKAV--QKLSPTKALPNRTSR---TLFCV 153 (166)
Q Consensus 86 ~C~~gyyG~~C~~-~C~p~~~~~ghy~C~~---~G~c~C~~GwtG---~~C~~~i--C~~~c~~c~nG~C~~---~~~C~ 153 (166)
....+|.|..|.. .|....... ..+|.. ...|.|++||+| ..|. .| |.. ..+|. +.|.+ .|+|.
T Consensus 17 ~~~~~~~~~~Cd~neC~~~~~~C-~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~-~~~C~-~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 17 TTENLYFQGAMGTNECLDNNGGC-SYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD-PDTCS-QLCVNLEGGYKCQ 92 (107)
T ss_dssp ---CCCCSCCBSCCGGGTGGGGC-SSEEECCSBSCEEECCTTCEEETTTEEE-C--------------------------
T ss_pred ccCCCcCCCCCcCccCcCCCCCC-CCEeEeCCCCeEEECCCCccccCCCccc-cccccCC-CCCcC-CeeecCCCCEEEE
Confidence 3456677777755 565421000 124432 246699999998 7786 34 431 23444 56653 59999
Q ss_pred CCCCCccCC
Q psy10880 154 LEPSMQLYG 162 (166)
Q Consensus 154 C~~G~~G~~ 162 (166)
|++||+|..
T Consensus 93 C~~Gy~~~~ 101 (107)
T 2w2n_E 93 CEEGFQLDP 101 (107)
T ss_dssp ---------
T ss_pred CCCCceECC
Confidence 999999864
No 44
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.29 E-value=0.00014 Score=50.58 Aligned_cols=53 Identities=19% Similarity=0.332 Sum_probs=38.1
Q ss_pred eeceeEEEecCCCCCCCCCC-C---CCCCCCCCCCcccCCC-----CCCccCCCCCCCCCCCccc
Q psy10880 78 SMLYEYRVTCDPHYYGNGCA-T---LCRPRDDSFGHYTCSH-----TGDRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 78 ~l~~~~r~~C~~gyyG~~C~-~---~C~p~~~~~ghy~C~~-----~G~c~C~~GwtG~~C~~~i 133 (166)
.....|+|.|.++|. .|+ . .|.+.. ...+++|.. ...|+|++||+|.+|++.+
T Consensus 27 n~~~~y~C~C~~G~~--~C~~~~~~~C~~~p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 27 RSNRVEYCWCNSGRA--QCHSVPVKSCSEPR-CFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp SSSCEEEEECSSSCC--BCCEECEEECSSCC-SCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred cCCCCcEeECCCCCc--ccccCcCCcccCCC-CCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence 335689999999997 886 1 476543 223456752 3468999999999998765
No 45
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.25 E-value=4.4e-05 Score=71.28 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=40.2
Q ss_pred ecCCCCCCCCCCC--CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccC
Q psy10880 86 TCDPHYYGNGCAT--LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQK 135 (166)
Q Consensus 86 ~C~~gyyG~~C~~--~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~ 135 (166)
.|.++|.|..|.. .|.. .+.||++| ..|.|+|.+||+|..|..+.|.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~--~C~ghG~C-~~G~C~Cd~G~~G~~C~~~~~~ 569 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLD--MCSGHGRC-VQGSCVCDEQWGGLYCDEPETS 569 (725)
T ss_dssp CTTCCEEEEEEEEESCSSG--GGGGSEEE-ETTEEEECTTEESTTSCEESSC
T ss_pred ccCCCcccccccccCCCCc--ccCCCcEE-CCCCEeeCCCccCCCcCccCCC
Confidence 6999999999993 5764 67789999 5699999999999999987654
No 46
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.22 E-value=4.7e-06 Score=69.58 Aligned_cols=86 Identities=8% Similarity=-0.102 Sum_probs=55.1
Q ss_pred cccceeeeceeEEEecCCCCCCCCCCC---CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCccccCCCCCCCCC-CccC
Q psy10880 72 HKSAHSSMLYEYRVTCDPHYYGNGCAT---LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKALP-NRTS 147 (166)
Q Consensus 72 ~~~~~~~l~~~~r~~C~~gyyG~~C~~---~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~n-G~C~ 147 (166)
..|+.+....+|.|.|+.+|.|..|+. .|...... ....|...|.+ |+|..|+..+ .+...+|++ |.|.
T Consensus 42 ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c-~s~pC~nggtc-----~~G~~c~~~~-eC~s~pC~ngG~C~ 114 (267)
T 4fbr_A 42 DGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGG-TSAPWQPGGVW-----VLGARDKQNI-VAVSIKSNDGGKTL 114 (267)
T ss_dssp STTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSS-TTSCEEEEEEE-----ECCCCSSCCE-EEEEEECSSTTSEE
T ss_pred CCCeecCCCCCeEEeCCCCcccccccccccccccccCc-CCCcccCCCee-----eccCcccccc-ccCCCCCCCCCEEe
Confidence 456778888999999999999999976 22211000 01123222222 5788888765 333345555 5675
Q ss_pred ---CCCceeCCCCCccCCCCC
Q psy10880 148 ---RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 148 ---~~~~C~C~~G~~G~~~~~ 165 (166)
..|+|.|++||+|. +|+
T Consensus 115 ~~~~sy~C~C~~Gf~G~-~Ce 134 (267)
T 4fbr_A 115 TGTTTYNGEGPIGFKSE-VTD 134 (267)
T ss_dssp EEEEEETTSCCEEEEEE-ECC
T ss_pred cCCccEEeeCCCCcccc-CCC
Confidence 35999999999996 554
No 47
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.17 E-value=0.00018 Score=55.04 Aligned_cols=21 Identities=43% Similarity=0.911 Sum_probs=18.7
Q ss_pred cCCC-CCCccCCCCCCCCCCCc
Q psy10880 111 TCSH-TGDRKCLPGWSGDYCTK 131 (166)
Q Consensus 111 ~C~~-~G~c~C~~GwtG~~C~~ 131 (166)
+|++ +|+|+|.+||+|..|++
T Consensus 125 ~Cd~~tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 125 SCNPVTGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp CCCTTTCCCCBCTTEESTTCCE
T ss_pred CCCCCCCEeECCCCCcCCCCCC
Confidence 7886 79999999999999974
No 48
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.15 E-value=0.00027 Score=52.70 Aligned_cols=64 Identities=25% Similarity=0.370 Sum_probs=44.3
Q ss_pred ccccccceeeeceeEEEecCCCCCCCCCCC---CCCCCCCCCCcc---cCCC----CCCccCCCCCC----CCCCCccc
Q psy10880 69 EDEHKSAHSSMLYEYRVTCDPHYYGNGCAT---LCRPRDDSFGHY---TCSH----TGDRKCLPGWS----GDYCTKAV 133 (166)
Q Consensus 69 ~~~~~~~~~~l~~~~r~~C~~gyyG~~C~~---~C~p~~~~~ghy---~C~~----~G~c~C~~Gwt----G~~C~~~i 133 (166)
+..+.+..+.+..+|+|.|.+||.|..|.. .|.+.. ...+. +|.. ...|.|++||+ |..|...+
T Consensus 54 pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~-~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~ 131 (142)
T 2c4f_L 54 PCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICV-NENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTV 131 (142)
T ss_dssp CCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTT-TGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEESS
T ss_pred CcCCCCEEeCCCCCEEeeCCCCccCCccccCcccccccc-CCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCCC
Confidence 355667788888899999999999999985 232111 00111 5643 24689999999 88997543
No 49
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.07 E-value=0.00034 Score=64.51 Aligned_cols=83 Identities=18% Similarity=0.325 Sum_probs=51.8
Q ss_pred ceeeeceeEEEe-cCCCCCCCCCC-----------------CCCCCC-CCCCCcccCCC-------CCCccCCCCCCC--
Q psy10880 75 AHSSMLYEYRVT-CDPHYYGNGCA-----------------TLCRPR-DDSFGHYTCSH-------TGDRKCLPGWSG-- 126 (166)
Q Consensus 75 ~~~~l~~~~r~~-C~~gyyG~~C~-----------------~~C~p~-~~~~ghy~C~~-------~G~c~C~~GwtG-- 126 (166)
.++.+..+|+|. |+++|.|..|. ..|... ..+..+.+|.. ..+|+|++||+|
T Consensus 62 ~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG 141 (634)
T 1yo8_A 62 RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDG 141 (634)
T ss_dssp CEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESS
T ss_pred ceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccC
Confidence 677888899999 99999999865 145532 12223456642 237899999998
Q ss_pred CCCCccccCCCCCCCCCCccC--CCCcee---CCCCC
Q psy10880 127 DYCTKAVQKLSPTKALPNRTS--RTLFCV---LEPSM 158 (166)
Q Consensus 127 ~~C~~~iC~~~c~~c~nG~C~--~~~~C~---C~~G~ 158 (166)
..|++.+..-.| +..++.|. ..|+|. |+.++
T Consensus 142 ~~Ce~d~DiDeC-~~~~~~C~~~~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 142 LICGEDSDLDGW-PNLNLVCATNATYHCIKDNCPHLP 177 (634)
T ss_dssp SSEEECTTSSSS-CSSCCTTTTTCSSSCSCCSSTTSC
T ss_pred cccccccCcccc-cCCCCcccCCCCcccccccccccc
Confidence 789753311111 12233444 357776 88765
No 50
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.05 E-value=3.7e-05 Score=61.23 Aligned_cols=63 Identities=22% Similarity=0.474 Sum_probs=20.8
Q ss_pred cccccceeeeceeEEEecCCCCCCCCCCC----CCCCCCCCCCcccCCC---CCCccCCCCCC----CCCCCccc
Q psy10880 70 DEHKSAHSSMLYEYRVTCDPHYYGNGCAT----LCRPRDDSFGHYTCSH---TGDRKCLPGWS----GDYCTKAV 133 (166)
Q Consensus 70 ~~~~~~~~~l~~~~r~~C~~gyyG~~C~~----~C~p~~~~~ghy~C~~---~G~c~C~~Gwt----G~~C~~~i 133 (166)
..+.|.++....+|+|.|++||.|..|.. .|........+ +|.. .+.|.|.+||+ |..|...+
T Consensus 50 C~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 50 CQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp -------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 44556788888899999999999999975 27653211122 5643 24679999999 99997643
No 51
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.03 E-value=0.00011 Score=52.85 Aligned_cols=57 Identities=16% Similarity=0.321 Sum_probs=38.4
Q ss_pred ccccceeeeceeEEEecCCCCCCCCCCCC-----CCCCCCCCCcccCCC---CCCccCCCCCCCCC
Q psy10880 71 EHKSAHSSMLYEYRVTCDPHYYGNGCATL-----CRPRDDSFGHYTCSH---TGDRKCLPGWSGDY 128 (166)
Q Consensus 71 ~~~~~~~~l~~~~r~~C~~gyyG~~C~~~-----C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~ 128 (166)
.+.+..+....+|+|.|.+||.|..|+.. |........+ +|.. ...|+|.+||+|..
T Consensus 23 ~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 23 CGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGD 87 (114)
T ss_dssp TTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECT
T ss_pred CCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECC
Confidence 34566777778999999999999999862 6532111111 5542 24679999999543
No 52
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.96 E-value=4.6e-05 Score=56.50 Aligned_cols=62 Identities=21% Similarity=0.471 Sum_probs=19.4
Q ss_pred cccccceeeeceeEEEecCCCCCCCCCCC-C---CCCCCCCCCcccCCC---CCCccCCCCCC----CCCCCcc
Q psy10880 70 DEHKSAHSSMLYEYRVTCDPHYYGNGCAT-L---CRPRDDSFGHYTCSH---TGDRKCLPGWS----GDYCTKA 132 (166)
Q Consensus 70 ~~~~~~~~~l~~~~r~~C~~gyyG~~C~~-~---C~p~~~~~ghy~C~~---~G~c~C~~Gwt----G~~C~~~ 132 (166)
..+.+..+.+...|+|.|++||.|..|.. + |........+ +|.. ...|.|.+||+ |..|...
T Consensus 50 C~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 50 CQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPT 122 (134)
T ss_dssp -------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCccCcC
Confidence 34556677777899999999999999976 3 7643211112 5643 23679999999 8999653
No 53
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.93 E-value=0.00049 Score=54.71 Aligned_cols=37 Identities=11% Similarity=0.034 Sum_probs=28.1
Q ss_pred CCCCCccccCCCCCCCCCCccCCCCceeCCCCCccCCCCC
Q psy10880 126 GDYCTKAVQKLSPTKALPNRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 126 G~~C~~~iC~~~c~~c~nG~C~~~~~C~C~~G~~G~~~~~ 165 (166)
...|.+++|...| -|+|.|+.+.+|.|++||+|. -|+
T Consensus 143 ~K~C~~~~C~~~C--~ngG~Cv~P~~C~C~~Gw~G~-~C~ 179 (188)
T 2ygo_A 143 FKTCQQAECPGGC--RNGGFCNERRICECPDGFHGP-HCE 179 (188)
T ss_dssp EEEECCCCCTTCC--CTTCEECTTSCEECCTTCBTT-TTC
T ss_pred cccccCCccCCCC--CCCCEeCCCCcccCcCCCCCC-CCc
Confidence 3467788887432 245799999999999999997 553
No 54
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.85 E-value=6.5e-05 Score=47.35 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=25.0
Q ss_pred CccCCCCCCCCCCCccccCCCCCCCCC-CccCC-------CCceeCCCCCccCCCCC
Q psy10880 117 DRKCLPGWSGDYCTKAVQKLSPTKALP-NRTSR-------TLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~iC~~~c~~c~n-G~C~~-------~~~C~C~~G~~G~~~~~ 165 (166)
.|+|++||+ ..+|+| |.|.. .|+|.|++||+|. .|+
T Consensus 4 ~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~-~Ce 47 (52)
T 3ca7_A 4 TYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQ-RCE 47 (52)
T ss_dssp CBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEEST-TSC
T ss_pred eeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCC-CCc
Confidence 358888887 123444 56752 3799999999997 664
No 55
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.49 E-value=0.00071 Score=46.31 Aligned_cols=40 Identities=10% Similarity=0.276 Sum_probs=25.5
Q ss_pred CccCCCCCC----CCCCCccc--cCCCCCCCCCCccC---CCCceeCCCCCccC
Q psy10880 117 DRKCLPGWS----GDYCTKAV--QKLSPTKALPNRTS---RTLFCVLEPSMQLY 161 (166)
Q Consensus 117 ~c~C~~Gwt----G~~C~~~i--C~~~c~~c~nG~C~---~~~~C~C~~G~~G~ 161 (166)
.|+|++||+ |..|. .+ |.. .+|+ +.|. ..|+|.|+ ||.|.
T Consensus 26 ~C~C~~G~~~~~~g~~C~-dideC~~--~~C~-~~C~n~~g~y~C~C~-g~~G~ 74 (87)
T 1z6c_A 26 ECECPEGYRYNLKSKSCE-DIDECSE--NMCA-QLCVNYPGGYTCYCD-GKKGF 74 (87)
T ss_dssp CCSSSTTCEEETTTTEEE-CCCHHHH--SCCS-SEECCCSSSCCEECC-SSSCC
T ss_pred EEECCCCceECCCCCcCC-CcCeeCC--CCCC-CEEEccCCCEEEECC-CCcCC
Confidence 348999998 78884 33 432 3444 5665 35999996 44443
No 56
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.24 E-value=0.0014 Score=42.09 Aligned_cols=18 Identities=33% Similarity=0.530 Sum_probs=15.5
Q ss_pred CCccCCCCCCCCCCCccc
Q psy10880 116 GDRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 116 G~c~C~~GwtG~~C~~~i 133 (166)
..|.|++||+|.+|+..|
T Consensus 34 y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 34 YLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp EEEEECTTEESTTSCEEC
T ss_pred EeEeCCCCCcCCCcCccC
Confidence 466999999999999876
No 57
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.19 E-value=0.0012 Score=56.00 Aligned_cols=40 Identities=18% Similarity=0.406 Sum_probs=13.0
Q ss_pred ccCCCCCC----CCCCCccccCC-CCCCCCCCccCC---CCceeCCCCCc
Q psy10880 118 RKCLPGWS----GDYCTKAVQKL-SPTKALPNRTSR---TLFCVLEPSMQ 159 (166)
Q Consensus 118 c~C~~Gwt----G~~C~~~iC~~-~c~~c~nG~C~~---~~~C~C~~G~~ 159 (166)
|.|.+||+ |..| +.+-.+ ...+|.++ |.+ .|+|.|++||.
T Consensus 26 C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 26 CTCHTGYRLTEDGRTC-QDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp ---------------------------CCTTE-EC-----CCEECCTTEE
T ss_pred eECCCCceECCCCCcc-CccceeCCcCcccCc-CCCCCCCCeEEECCCce
Confidence 39999998 8899 444222 23455544 653 49999999998
No 58
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.16 E-value=0.0011 Score=59.01 Aligned_cols=51 Identities=29% Similarity=0.554 Sum_probs=15.1
Q ss_pred eeEEEecCCCCCCCCCCC-------------CCCCCCCC---CCcccCCC-CCCccCCCCCCCCCCCc
Q psy10880 81 YEYRVTCDPHYYGNGCAT-------------LCRPRDDS---FGHYTCSH-TGDRKCLPGWSGDYCTK 131 (166)
Q Consensus 81 ~~~r~~C~~gyyG~~C~~-------------~C~p~~~~---~ghy~C~~-~G~c~C~~GwtG~~C~~ 131 (166)
..++|.|.++|.|..|++ .|.+..-. .-+.+|+. .|+|+|.+||+|..|++
T Consensus 458 ~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 458 ETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp TTCCBCBCTTCCSTTTCC--------------------------------------------------
T ss_pred CCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 456799999999999963 13322111 11234654 58999999999999974
No 59
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.03 E-value=0.0029 Score=53.89 Aligned_cols=13 Identities=31% Similarity=0.337 Sum_probs=8.1
Q ss_pred CCceeCCCCCccC
Q psy10880 149 TLFCVLEPSMQLY 161 (166)
Q Consensus 149 ~~~C~C~~G~~G~ 161 (166)
.|+|.|++||++.
T Consensus 59 ~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 59 GYKCQCEEGFQLD 71 (400)
T ss_dssp SCBCCCCTTCCCC
T ss_pred ceeeecccccccc
Confidence 3666666666654
No 60
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.00 E-value=0.0014 Score=47.29 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=30.5
Q ss_pred CcccCCCCCCccCCCCCCCCCCCccccCCC--CCCCCCCccC--CCCceeCCCCCccC
Q psy10880 108 GHYTCSHTGDRKCLPGWSGDYCTKAVQKLS--PTKALPNRTS--RTLFCVLEPSMQLY 161 (166)
Q Consensus 108 ghy~C~~~G~c~C~~GwtG~~C~~~iC~~~--c~~c~nG~C~--~~~~C~C~~G~~G~ 161 (166)
+.|+| +|++||+|..+....|... ..+|. +.|. ..|+|.|++||++.
T Consensus 22 g~y~C------~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~ 72 (118)
T 1dx5_I 22 TSYLC------VCAEGFAPIPHEPHRCQMFCNQTACP-ADCDPNTQASCECPEGYILD 72 (118)
T ss_dssp SCEEE------ECCTTEEEETTEEEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEE
T ss_pred CCEEe------ECCCCccccCCCCCccccccCCCCCC-CcccCCCCeEeECCCCccCC
Confidence 45666 9999999986654444321 11111 3444 35999999999954
No 61
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.94 E-value=0.0049 Score=50.70 Aligned_cols=58 Identities=26% Similarity=0.573 Sum_probs=41.7
Q ss_pred cccccceeeeceeEEEecCCCCCCCCCCC---CCCCC-CCCCCcccCCC---CCCccCCCCCCCCC
Q psy10880 70 DEHKSAHSSMLYEYRVTCDPHYYGNGCAT---LCRPR-DDSFGHYTCSH---TGDRKCLPGWSGDY 128 (166)
Q Consensus 70 ~~~~~~~~~l~~~~r~~C~~gyyG~~C~~---~C~p~-~~~~ghy~C~~---~G~c~C~~GwtG~~ 128 (166)
..+.+.++.....|+|.|.+||.|..|+. .|.+. .....| +|.. ...|.|.+||+|..
T Consensus 13 C~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 13 CLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp CTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCT
T ss_pred CCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccccc
Confidence 45567777777889999999999999983 58652 111223 6653 35789999999853
No 62
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.92 E-value=0.0031 Score=38.73 Aligned_cols=26 Identities=15% Similarity=0.232 Sum_probs=16.7
Q ss_pred CCCCCCccC-----CCCceeCCCCCccCCCCC
Q psy10880 139 TKALPNRTS-----RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 139 ~~c~nG~C~-----~~~~C~C~~G~~G~~~~~ 165 (166)
.+|.||.|. ..|.|.|++||+|. .|+
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~-~Ce 42 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGV-RCE 42 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSST-TSC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCccC-CCC
Confidence 445556664 13678888888876 554
No 63
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.81 E-value=0.0057 Score=35.52 Aligned_cols=26 Identities=15% Similarity=0.217 Sum_probs=17.8
Q ss_pred CCCCC-CccC---CCCceeCCCCCccCCCCC
Q psy10880 139 TKALP-NRTS---RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 139 ~~c~n-G~C~---~~~~C~C~~G~~G~~~~~ 165 (166)
.+|+| |.|. ..|+|.|++||+|. .|+
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~G~-~Ce 38 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFEGK-NCE 38 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCCST-TSC
T ss_pred CCCCCCCEeEcCCCceEeECCCCCcCC-ccC
Confidence 34554 5675 24789999999887 554
No 64
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.81 E-value=0.0011 Score=45.20 Aligned_cols=55 Identities=16% Similarity=0.290 Sum_probs=35.9
Q ss_pred cceeeeceeEEEecCCCCC-----CCCCCC--CCCCCCCCCCcccCCC---CCCccCCCCCCCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYY-----GNGCAT--LCRPRDDSFGHYTCSH---TGDRKCLPGWSGDY 128 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyy-----G~~C~~--~C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~ 128 (166)
+..+.+..+|+|.|++||. |..|.. .|........+.+|.. ...|.|++||+|..
T Consensus 16 g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 16 GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence 4677888899999999997 777754 2532211111235542 24679999999853
No 65
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=95.77 E-value=0.0014 Score=44.39 Aligned_cols=54 Identities=24% Similarity=0.437 Sum_probs=37.3
Q ss_pred cceeeeceeEEEecCCCCC--CCCCCC--CCCCCCCCCCcccCCC---CCCccCCCCCCCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYY--GNGCAT--LCRPRDDSFGHYTCSH---TGDRKCLPGWSGDY 128 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyy--G~~C~~--~C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~ 128 (166)
+..+.+..+|+|.|++||. |..|.. .|...... .+.+|.. ...|.|++||+|..
T Consensus 17 g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C-~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 17 GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPC-GNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp SEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTT-SSSCEEECSSSEEECCSSSSCCCS
T ss_pred CEEEecCCCEEEECCCCeECCCCccCCcccccCCCCC-CCCEeECCCCCEEeECCCCeEeCC
Confidence 5667777899999999997 888864 46521111 2346653 24679999999864
No 66
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.61 E-value=0.011 Score=34.27 Aligned_cols=23 Identities=17% Similarity=0.456 Sum_probs=10.7
Q ss_pred cceeeeceeEEEecCCCCCCCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYYGNGC 96 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyyG~~C 96 (166)
+..+....+|+|.|+++|.|..|
T Consensus 15 g~C~~~~~~~~C~C~~G~~G~~C 37 (39)
T 1edm_B 15 GSCKDDINSYECWCPFGFEGKNC 37 (39)
T ss_dssp CEEEEETTEEEEECCTTCCSTTS
T ss_pred CEeEcCCCceEeECCCCCcCCcc
Confidence 33444444445555555554444
No 67
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.30 E-value=0.016 Score=36.19 Aligned_cols=16 Identities=38% Similarity=0.829 Sum_probs=11.1
Q ss_pred ccCCCCCCCCCCCccc
Q psy10880 118 RKCLPGWSGDYCTKAV 133 (166)
Q Consensus 118 c~C~~GwtG~~C~~~i 133 (166)
|.|++||+|.+|+..+
T Consensus 31 C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 31 CNCVIGYSGDRCQTRD 46 (53)
T ss_dssp EECCTTCCSSSSCCCS
T ss_pred EECCCCCcCCcCCccC
Confidence 3777777777776654
No 68
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=95.11 E-value=0.015 Score=48.48 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=31.2
Q ss_pred CcccCCCCCCccCCCCCCCCCCCcc-----------ccCCC--CCCCCC-CccCCCCceeCCCCCccC
Q psy10880 108 GHYTCSHTGDRKCLPGWSGDYCTKA-----------VQKLS--PTKALP-NRTSRTLFCVLEPSMQLY 161 (166)
Q Consensus 108 ghy~C~~~G~c~C~~GwtG~~C~~~-----------iC~~~--c~~c~n-G~C~~~~~C~C~~G~~G~ 161 (166)
||++| .-|.|+|.+||+|..|+-+ .|... -..|++ |.| .=++|.|..+|.|.
T Consensus 200 g~G~~-~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C-~CG~C~C~~~~~~~ 265 (280)
T 2p26_A 200 GKGFL-ECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC-VCGQCLCHTSDVPG 265 (280)
T ss_dssp GSEEE-ETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEE-ETTEEEECCCSSTT
T ss_pred CCCeE-CCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceE-eCCeeECcCCCCCC
Confidence 45554 2489999999999999732 23210 001221 223 23899998888664
No 69
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=94.95 E-value=0.019 Score=35.80 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=18.9
Q ss_pred CCCC-CccC-----CCCceeCCCCCccCCCCC
Q psy10880 140 KALP-NRTS-----RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 140 ~c~n-G~C~-----~~~~C~C~~G~~G~~~~~ 165 (166)
+|+| |.|. ..|+|.|++||+|. .|+
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~-~Ce 43 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGD-RCQ 43 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSS-SSC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCC-cCC
Confidence 5555 5775 34899999999997 664
No 70
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=94.68 E-value=0.016 Score=50.17 Aligned_cols=17 Identities=24% Similarity=0.669 Sum_probs=9.8
Q ss_pred eEEEecCCCCCCCCCCC
Q psy10880 82 EYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~ 98 (166)
.+.|.|.++|.|..|++
T Consensus 271 ~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 271 KLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp CEEECCCTTEESTTSCE
T ss_pred CeeeeCcCCCcCCCccc
Confidence 34456666666666653
No 71
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=94.40 E-value=0.014 Score=39.66 Aligned_cols=56 Identities=14% Similarity=0.288 Sum_probs=37.0
Q ss_pred ccceeeeceeEEEecCCCCC----CCCCCC--CCCCCCCCCCcccCCC---CCCccCCCCCCCCCCCcc
Q psy10880 73 KSAHSSMLYEYRVTCDPHYY----GNGCAT--LCRPRDDSFGHYTCSH---TGDRKCLPGWSGDYCTKA 132 (166)
Q Consensus 73 ~~~~~~l~~~~r~~C~~gyy----G~~C~~--~C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~C~~~ 132 (166)
.+..+.+...|+|.|++||. |..|.. .|.+.. . +.+|.. ...|.|+ ||.|..|...
T Consensus 15 ~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~-C--~~~C~n~~g~y~C~C~-g~~G~~~~~~ 79 (87)
T 1z6c_A 15 TAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM-C--AQLCVNYPGGYTCYCD-GKKGFKLAQD 79 (87)
T ss_dssp TSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSC-C--SSEECCCSSSCCEECC-SSSCCBCCTT
T ss_pred CCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCC-C--CCEEEccCCCEEEECC-CCcCCcccCC
Confidence 35566777889999999998 777854 243221 1 134542 2466998 8888887653
No 72
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.30 E-value=0.014 Score=35.16 Aligned_cols=17 Identities=35% Similarity=0.780 Sum_probs=13.8
Q ss_pred CccCCCCCCCCCCCccc
Q psy10880 117 DRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i 133 (166)
.|.|++||+|.+|+..+
T Consensus 27 ~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 27 TCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp EEECCTTEETTTTCEEC
T ss_pred EEEcCCCCcCCcCCccc
Confidence 45999999999998654
No 73
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.28 E-value=0.051 Score=49.78 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=29.7
Q ss_pred CCccCCCCCC---CCCCCc-cccCCCCCCCCCCccC---CCCceeCCCCCccC
Q psy10880 116 GDRKCLPGWS---GDYCTK-AVQKLSPTKALPNRTS---RTLFCVLEPSMQLY 161 (166)
Q Consensus 116 G~c~C~~Gwt---G~~C~~-~iC~~~c~~c~nG~C~---~~~~C~C~~G~~G~ 161 (166)
+.|.|.+||+ |..|.. .-|.. ..+|. ..|. ..|+|.|++||++.
T Consensus 315 ~~C~C~~G~~~~~~~~C~dideC~~-~~~C~-~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 315 YECLCPDGFQLVAQRRCEDIDECQD-PDTCS-QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCCCSSSCCCSSSCCCCCCCCSS-SSSCT-TTCCBCSSCBCCCCCSSCBCC
T ss_pred cEEeCCCCeEcCCCCcccCccccCC-CCccc-cccccCCCCeeeeeecccccC
Confidence 5779999999 778862 12431 22333 3554 35999999999975
No 74
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=94.24 E-value=0.0055 Score=57.27 Aligned_cols=44 Identities=14% Similarity=-0.003 Sum_probs=33.6
Q ss_pred ccCCCCCCCCCCC-ccccCCCCCCCCCCccCCCCceeCCCCCccCCCCC
Q psy10880 118 RKCLPGWSGDYCT-KAVQKLSPTKALPNRTSRTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 118 c~C~~GwtG~~C~-~~iC~~~c~~c~nG~C~~~~~C~C~~G~~G~~~~~ 165 (166)
.+|.+||+|.+|. .+.|...|. .+|.|+. ++|.|.+||+|. .|.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~--ghG~C~~-G~C~Cd~G~~G~-~C~ 564 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCS--GHGRCVQ-GSCVCDEQWGGL-YCD 564 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGG--GSEEEET-TEEEECTTEEST-TSC
T ss_pred CccCCCcccccccccCCCCcccC--CCcEECC-CCEeeCCCccCC-CcC
Confidence 3799999999999 466664222 3578865 899999999997 553
No 75
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=94.02 E-value=0.038 Score=33.68 Aligned_cols=15 Identities=27% Similarity=0.693 Sum_probs=10.2
Q ss_pred ccCCCCCCCCCCCcc
Q psy10880 118 RKCLPGWSGDYCTKA 132 (166)
Q Consensus 118 c~C~~GwtG~~C~~~ 132 (166)
|+|++||+|.+|+..
T Consensus 30 C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 30 CRCEVGYTGVRCEHF 44 (46)
T ss_dssp EEECTTCSSTTSCCC
T ss_pred EECCCCCccCCCCcc
Confidence 377777777777653
No 76
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=93.84 E-value=0.029 Score=39.83 Aligned_cols=43 Identities=7% Similarity=-0.150 Sum_probs=28.0
Q ss_pred ccCCCCCCCCCCCccccCCCCCCCCCCccC---CCCceeCCCCCccC
Q psy10880 118 RKCLPGWSGDYCTKAVQKLSPTKALPNRTS---RTLFCVLEPSMQLY 161 (166)
Q Consensus 118 c~C~~GwtG~~C~~~iC~~~c~~c~nG~C~---~~~~C~C~~G~~G~ 161 (166)
-....||+|..|.+.-|......|. ..|. ..|+|.|++||+|.
T Consensus 16 ~~~~~~~~~~~Cd~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~ 61 (107)
T 2w2n_E 16 PTTENLYFQGAMGTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLV 61 (107)
T ss_dssp ----CCCCSCCBSCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEE
T ss_pred cccCCCcCCCCCcCccCcCCCCCCC-CEeEeCCCCeEEECCCCcccc
Confidence 3667999999998766664322332 2454 35999999999983
No 77
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=93.77 E-value=0.025 Score=33.97 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=23.3
Q ss_pred cccccccee--eeceeEEEecCCCCCCCCCCC
Q psy10880 69 EDEHKSAHS--SMLYEYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 69 ~~~~~~~~~--~l~~~~r~~C~~gyyG~~C~~ 98 (166)
+..+.|..+ ....+|+|.|+++|.|..|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 345667665 345789999999999999974
No 78
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=93.46 E-value=0.0058 Score=45.89 Aligned_cols=43 Identities=14% Similarity=0.107 Sum_probs=24.0
Q ss_pred CccCCCCCC----CCCCCccc---cCCCCCCC---CCCccCC-------CCceeCCCCCc
Q psy10880 117 DRKCLPGWS----GDYCTKAV---QKLSPTKA---LPNRTSR-------TLFCVLEPSMQ 159 (166)
Q Consensus 117 ~c~C~~Gwt----G~~C~~~i---C~~~c~~c---~nG~C~~-------~~~C~C~~G~~ 159 (166)
+|+|++||+ |..|.... |.....++ +++.|.. .|+|.|++||.
T Consensus 25 ~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~ 84 (162)
T 1uzk_A 25 ICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84 (162)
T ss_dssp EEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCE
T ss_pred EEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCC
Confidence 349999998 88896321 43222222 2345642 47888888887
No 79
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.41 E-value=0.072 Score=45.17 Aligned_cols=53 Identities=17% Similarity=0.403 Sum_probs=36.3
Q ss_pred cceeeeceeEEEecCCCCC---CCCCCC--CCCCCCCCCCcccCCC---CCCccCCCCCCCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYY---GNGCAT--LCRPRDDSFGHYTCSH---TGDRKCLPGWSGDY 128 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyy---G~~C~~--~C~p~~~~~ghy~C~~---~G~c~C~~GwtG~~ 128 (166)
..++.+..+|+|.|++||. |..|.. .|.....+ .+ +|.. ...|.|.+||++..
T Consensus 12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C-~~-~C~n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 12 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTC-SQ-LCVNLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp SEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSC-SS-CCBCCSSSCBCCCCTTCCCCT
T ss_pred CEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCC-CC-ccCCCccceeeeccccccccc
Confidence 4567778899999999998 888864 46521111 12 5543 25779999998753
No 80
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=93.18 E-value=0.073 Score=38.72 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=36.5
Q ss_pred cccccceeeec--eeE-EEecCCCCCCCCCCC----CCCCCCCCCCcccCCCCCCccCCCCCCCCCCCc
Q psy10880 70 DEHKSAHSSML--YEY-RVTCDPHYYGNGCAT----LCRPRDDSFGHYTCSHTGDRKCLPGWSGDYCTK 131 (166)
Q Consensus 70 ~~~~~~~~~l~--~~~-r~~C~~gyyG~~C~~----~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~C~~ 131 (166)
..++|+++... ..+ +|.|+++|.|..|++ .|.... ...|++ .+..+++|..|..
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g~--G~~YrG------~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGN--GHFYRG------KASTDTMGRPCLP 63 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCSS--CTTCCS------CCCBBTTSCBBCC
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCcccc--ccccee------eccccccCCcccC
Confidence 34566676653 344 999999999999986 354321 124555 7788888888863
No 81
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=93.07 E-value=0.03 Score=35.93 Aligned_cols=18 Identities=44% Similarity=0.903 Sum_probs=15.0
Q ss_pred CccCCCCCCCCCCCcccc
Q psy10880 117 DRKCLPGWSGDYCTKAVQ 134 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~iC 134 (166)
.|.|++||+|.+|+..+.
T Consensus 33 ~C~C~~Gf~G~~Ce~~i~ 50 (63)
T 1hae_A 33 LCKCQPGFTGARCTENVP 50 (63)
T ss_dssp EEECCTTEESTTSCEECC
T ss_pred EEECCCCCcCCccCcCcC
Confidence 459999999999987663
No 82
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=93.04 E-value=0.02 Score=50.50 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=0.0
Q ss_pred ccCCCCCCccCCCCCCCCCCCccccCCCCCCCCCCccC-CCCceeCCCCCc
Q psy10880 110 YTCSHTGDRKCLPGWSGDYCTKAVQKLSPTKALPNRTS-RTLFCVLEPSMQ 159 (166)
Q Consensus 110 y~C~~~G~c~C~~GwtG~~C~~~iC~~~c~~c~nG~C~-~~~~C~C~~G~~ 159 (166)
++|....+|+|.+||+|..|+...|. ++|.|. ..++|.-|.|..
T Consensus 377 g~C~~~~~C~C~~G~~G~~Ce~c~C~------~~g~C~~~~Gqc~~~~~~~ 421 (426)
T 3zyj_B 377 GTCHNNVRCLCPAAYTGILCEKLRCE------EAGSCGSDSGQGAPPHGTH 421 (426)
T ss_dssp ---------------------------------------------------
T ss_pred CCcCCCCCCcCCCCCcCCCCcCCCCC------CCCcccCCCCccCCCCCcc
Confidence 35655568899999999999763322 246676 468888877643
No 83
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=93.01 E-value=0.034 Score=46.34 Aligned_cols=48 Identities=29% Similarity=0.596 Sum_probs=34.4
Q ss_pred EEEecCCCCCCCCCC----C--------CCCCCC---CCCCcccCCCCCCccCCCCC------CCCCCCc
Q psy10880 83 YRVTCDPHYYGNGCA----T--------LCRPRD---DSFGHYTCSHTGDRKCLPGW------SGDYCTK 131 (166)
Q Consensus 83 ~r~~C~~gyyG~~C~----~--------~C~p~~---~~~ghy~C~~~G~c~C~~Gw------tG~~C~~ 131 (166)
.+|.|.++|+|..|+ . .|++.. .+.||++| .-|+|+|.++| .|.||+.
T Consensus 207 G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C-~CG~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 207 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC-VCGQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEE-ETTEEEECCCSSTTCEEESTTSCE
T ss_pred CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceE-eCCeeECcCCCCCCeeEeeEeccc
Confidence 368999999999996 2 476421 24567777 45899998887 5667753
No 84
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=92.68 E-value=0.043 Score=34.46 Aligned_cols=16 Identities=25% Similarity=0.675 Sum_probs=12.4
Q ss_pred ccCCCCCCCCCCCccc
Q psy10880 118 RKCLPGWSGDYCTKAV 133 (166)
Q Consensus 118 c~C~~GwtG~~C~~~i 133 (166)
|+|++||+|.+|+..+
T Consensus 31 C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 31 CNCVVGYIGERCQYRD 46 (53)
T ss_dssp EEECTTEESTTSCEEC
T ss_pred EecCCCCcCCCCCcCC
Confidence 3888888888887765
No 85
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=92.23 E-value=0.038 Score=34.70 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=23.1
Q ss_pred ccccccccee--eeceeEEEecCCCCCCCCCCC
Q psy10880 68 TEDEHKSAHS--SMLYEYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 68 ~~~~~~~~~~--~l~~~~r~~C~~gyyG~~C~~ 98 (166)
+...+.|.++ .....|+|.|+++|.|..|+.
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 3456667776 334679999999999999874
No 86
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=92.13 E-value=0.035 Score=36.09 Aligned_cols=20 Identities=5% Similarity=0.135 Sum_probs=14.1
Q ss_pred CccC---CCCceeCCCCCc-cCCCC
Q psy10880 144 NRTS---RTLFCVLEPSMQ-LYGNC 164 (166)
Q Consensus 144 G~C~---~~~~C~C~~G~~-G~~~~ 164 (166)
|.|. ..|.|.|++||+ |. +|
T Consensus 25 gtC~~~~g~y~C~C~~Gy~~G~-~C 48 (61)
T 2k2s_B 25 GTCKETNSGYICRCNQGYRISL-DG 48 (61)
T ss_dssp CEEEECSSEEEEECCTTEEEEE-CS
T ss_pred cccccCCCceEeECCCCCccCC-CC
Confidence 4665 248888888888 76 44
No 87
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=91.98 E-value=0.083 Score=33.80 Aligned_cols=29 Identities=17% Similarity=0.375 Sum_probs=22.9
Q ss_pred cccccceeee-----ceeEEEecCCCCCCCCCCC
Q psy10880 70 DEHKSAHSSM-----LYEYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 70 ~~~~~~~~~l-----~~~~r~~C~~gyyG~~C~~ 98 (166)
..+.|.++.+ ...|+|.|++||.|..|+.
T Consensus 14 C~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 14 CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp SCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 4556777653 4689999999999999975
No 88
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=91.76 E-value=0.048 Score=45.92 Aligned_cols=55 Identities=18% Similarity=0.399 Sum_probs=15.0
Q ss_pred ceeeeceeEEEecCCCCC----CCCCCC--CCCCCCCCCCcccCCC---CCCccCCCCCC----CCCCCc
Q psy10880 75 AHSSMLYEYRVTCDPHYY----GNGCAT--LCRPRDDSFGHYTCSH---TGDRKCLPGWS----GDYCTK 131 (166)
Q Consensus 75 ~~~~l~~~~r~~C~~gyy----G~~C~~--~C~p~~~~~ghy~C~~---~G~c~C~~Gwt----G~~C~~ 131 (166)
.+.....+|+|.|.+||. |..|.. .|.....+ .+. |.. ...|.|.+||+ |..|..
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C-~~~-C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYC-SQG-CTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp ------------------------------------CC-TTE-EC-----CCEECCTTEEECTTSSCEEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcc-cCc-CCCCCCCCeEEECCCceEcCCCCeECC
Confidence 344556679999999998 889964 47521111 122 543 25779999998 777853
No 89
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=91.63 E-value=0.081 Score=34.33 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=10.0
Q ss_pred ceeeeceeEEEecCCCCC-CCCC
Q psy10880 75 AHSSMLYEYRVTCDPHYY-GNGC 96 (166)
Q Consensus 75 ~~~~l~~~~r~~C~~gyy-G~~C 96 (166)
.++.....|+|.|++||. |..|
T Consensus 26 tC~~~~g~y~C~C~~Gy~~G~~C 48 (61)
T 2k2s_B 26 TCKETNSGYICRCNQGYRISLDG 48 (61)
T ss_dssp EEEECSSEEEEECCTTEEEEECS
T ss_pred ccccCCCceEeECCCCCccCCCC
Confidence 334444444444444444 4444
No 90
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=91.62 E-value=0.094 Score=32.44 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=12.4
Q ss_pred CccCCCCCCCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKA 132 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~ 132 (166)
.|+|++||+|.+|+..
T Consensus 34 ~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 34 SCECAIGFMGQRCEYK 49 (52)
T ss_dssp EEECCTTEESTTSCEE
T ss_pred EEECCCCCcCCCCccc
Confidence 4488888888888754
No 91
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=91.11 E-value=0.24 Score=42.73 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=12.5
Q ss_pred CccCCCCCCCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKA 132 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~ 132 (166)
.|.|.+||+|..|++-
T Consensus 273 ~C~C~~nt~G~~Ce~C 288 (375)
T 4aqt_A 273 MCNCKHNTYGVDCEKC 288 (375)
T ss_dssp EECCCTTEESTTSCEE
T ss_pred eeeCcCCCcCCCcccC
Confidence 4588899999888753
No 92
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=90.63 E-value=0.16 Score=36.91 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=26.4
Q ss_pred CccCCCCCCCCCCCccccCCCCCCCCCCccCCCCceeCCCCCccC
Q psy10880 117 DRKCLPGWSGDYCTKAVQKLSPTKALPNRTSRTLFCVLEPSMQLY 161 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~iC~~~c~~c~nG~C~~~~~C~C~~G~~G~ 161 (166)
.|.|++||+|.+|++.+.. .|..+. ...|++.+..++.|.
T Consensus 20 ~C~Cp~g~~G~~Ce~~~~~----~C~~g~-G~~YrG~~~~t~sG~ 59 (122)
T 2fd6_A 20 WCNCPKKFGGQHCEIDKSK----TCYEGN-GHFYRGKASTDTMGR 59 (122)
T ss_dssp EEECCTTEESTTSCEESSC----CSBCSS-CTTCCSCCCBBTTSC
T ss_pred CccCCCCCCCccccccCcC----CCcccc-cccceeeccccccCC
Confidence 4599999999999987632 122111 124777777777765
No 93
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=90.47 E-value=0.037 Score=40.94 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=17.6
Q ss_pred CCCC-CccC---CCCceeCCCCCccCCCCC
Q psy10880 140 KALP-NRTS---RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 140 ~c~n-G~C~---~~~~C~C~~G~~G~~~~~ 165 (166)
+|++ |.|. ..|+|.|++||+|. .|+
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~G~-~Ce 154 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFYGP-ECE 154 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEEST-TSC
T ss_pred CCCCCCEEecCCCCceEeCCCCCcCc-ccc
Confidence 3443 5665 35899999999987 665
No 94
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=90.39 E-value=0.13 Score=32.88 Aligned_cols=17 Identities=24% Similarity=0.659 Sum_probs=8.5
Q ss_pred eEEEecCCCCCCCCCCC
Q psy10880 82 EYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~ 98 (166)
.|.|.|++||.|..|+.
T Consensus 32 ~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 32 VYSCECAIGFMGQRCEY 48 (58)
T ss_dssp EEEEEECTTEESSSSCE
T ss_pred CEEeECCCCCccCCCcc
Confidence 34455555555555543
No 95
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=90.16 E-value=0.14 Score=37.78 Aligned_cols=17 Identities=29% Similarity=0.704 Sum_probs=14.6
Q ss_pred CccCCCCCCCCCCCccc
Q psy10880 117 DRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i 133 (166)
.|+|.+||+|.+|+..+
T Consensus 141 ~c~C~~g~~G~~Ce~~~ 157 (162)
T 1g1s_A 141 TCSCYPGFYGPECEYVR 157 (162)
T ss_dssp EEEECTTEESTTSCEEC
T ss_pred eEeCCCCCcCcccccCc
Confidence 45999999999998764
No 96
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=90.01 E-value=0.23 Score=43.44 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=11.1
Q ss_pred CCcee-CCCCCccCCCCC
Q psy10880 149 TLFCV-LEPSMQLYGNCA 165 (166)
Q Consensus 149 ~~~C~-C~~G~~G~~~~~ 165 (166)
.++|. |+.++.|. +|+
T Consensus 356 ~G~C~~C~~nt~G~-~CE 372 (403)
T 2y38_A 356 GGVCLDCQHHTTGI-NCE 372 (403)
T ss_dssp CEEESSCCSSEEST-TSC
T ss_pred CCCCCCCcCcCcCC-CCC
Confidence 47885 88877776 554
No 97
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.67 E-value=0.094 Score=49.14 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=29.4
Q ss_pred CCccCCCCCC---CCCCCc-cccCCCCCCCCCCccC---CCCceeCCCCCccC
Q psy10880 116 GDRKCLPGWS---GDYCTK-AVQKLSPTKALPNRTS---RTLFCVLEPSMQLY 161 (166)
Q Consensus 116 G~c~C~~Gwt---G~~C~~-~iC~~~c~~c~nG~C~---~~~~C~C~~G~~G~ 161 (166)
+.|.|.+||+ |..|.. .-|. .+..|. ..|. ..|+|.|++||++.
T Consensus 333 y~C~C~~Gy~l~~g~~C~dideC~-~~~~C~-~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 333 YECLCPDGFQLVAQRRCEDIDECQ-DPDTCS-QLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp EEEECCTTCEEETTTEEECCCCCS-SSSSCT-TTCCBCSSCBCCCCCSSEECC
T ss_pred cccCCCCCCccCCCCccccCcccC-CCCCCC-CeeecCCCCceeecCCCCEeC
Confidence 4679999995 788852 2243 233333 3555 35999999999874
No 98
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=86.91 E-value=0.14 Score=32.63 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=14.0
Q ss_pred CccCCCCCCCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKA 132 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~ 132 (166)
.|.|++||+|.+|+..
T Consensus 34 ~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 34 SCECAIGFMGQRCEYK 49 (58)
T ss_dssp EEEECTTEESSSSCEE
T ss_pred EeECCCCCccCCCccc
Confidence 4699999999999864
No 99
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=86.76 E-value=0.33 Score=30.27 Aligned_cols=12 Identities=17% Similarity=0.049 Sum_probs=8.1
Q ss_pred CceeCCCCCccC
Q psy10880 150 LFCVLEPSMQLY 161 (166)
Q Consensus 150 ~~C~C~~G~~G~ 161 (166)
+.|.|++||+|.
T Consensus 30 ~~C~C~~gy~G~ 41 (50)
T 3e50_C 30 PACVCHSGYVGA 41 (50)
T ss_pred eEEECCCCCccc
Confidence 566777777665
No 100
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=86.62 E-value=0.063 Score=46.81 Aligned_cols=34 Identities=24% Similarity=0.521 Sum_probs=25.2
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCCCccCCCCCCCCC--CCcc
Q psy10880 92 YGNGCATLCRPRDDSFGHYTCSHTGDRKCLPGWSGDY--CTKA 132 (166)
Q Consensus 92 yG~~C~~~C~p~~~~~ghy~C~~~G~c~C~~GwtG~~--C~~~ 132 (166)
.|+.|-.. +.||+.|.. |.|+|.+||+|.. |...
T Consensus 190 Ig~~Cp~~------CsGhG~C~~-g~C~Cd~G~~g~d~~C~~~ 225 (387)
T 2ddu_A 190 ISEPCPSY------CSGHGDCIS-GVCFCDLGYTAAQGTCVSN 225 (387)
T ss_dssp EESCCGGG------GGGSEEEET-TEEEECTTEEEETTEEEES
T ss_pred ecccCccc------cCCCceecC-CeEEecCCcccCCCccccc
Confidence 45555544 457999954 9999999999975 7644
No 101
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=85.76 E-value=0.56 Score=40.93 Aligned_cols=20 Identities=25% Similarity=0.798 Sum_probs=15.2
Q ss_pred eEEEecCCCCCCCCCCCCCCC
Q psy10880 82 EYRVTCDPHYYGNGCATLCRP 102 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~~C~p 102 (166)
..+|.|..++.|..|++ |.|
T Consensus 285 ~g~C~C~hnT~G~~CEr-C~p 304 (403)
T 2y38_A 285 RLQCACQHNTCGGSCDR-CCP 304 (403)
T ss_dssp CEEECCCTTEESSSCCE-ECT
T ss_pred ceEeECcCcCcCCCCCC-CCc
Confidence 35689999999999974 443
No 102
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=85.69 E-value=0.23 Score=36.62 Aligned_cols=22 Identities=9% Similarity=0.131 Sum_probs=14.2
Q ss_pred CCccC---CCCceeCCCCCccCCCCC
Q psy10880 143 PNRTS---RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 143 nG~C~---~~~~C~C~~G~~G~~~~~ 165 (166)
+|.|. ..|+|.|++||+|. .|+
T Consensus 130 ~g~C~~~~~~~~c~C~~g~~g~-~C~ 154 (164)
T 3cfw_A 130 HGECVEIINNYTCNCDVGYYGP-QCQ 154 (164)
T ss_dssp SEEEEEETTEEEEEECTTCBSS-SSC
T ss_pred CCeecccCCCceeeeCCCcccc-ccc
Confidence 34554 34777788777776 554
No 103
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.18 E-value=2.2 Score=38.90 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=25.5
Q ss_pred CCccCCCCCCCC--CCCccccCCCCCCCCCCccC---CCCceeCCCCCcc
Q psy10880 116 GDRKCLPGWSGD--YCTKAVQKLSPTKALPNRTS---RTLFCVLEPSMQL 160 (166)
Q Consensus 116 G~c~C~~GwtG~--~C~~~iC~~~c~~c~nG~C~---~~~~C~C~~G~~G 160 (166)
+.+.|..|..+. .|...-|......|. ..|. ..|+|.|++||++
T Consensus 277 ~~~dC~dgsDe~~~~C~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~ 325 (699)
T 1n7d_A 277 MARDCRDWSDEPIKECGTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL 325 (699)
T ss_dssp SSCCSSSSCSCCCSSCCCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCC
T ss_pred ccceecCcccccccccccccccccccCcC-CCcccCCCCcEEeCCCCeEc
Confidence 556677776654 344333433222222 2344 3599999999995
No 104
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=84.88 E-value=0.27 Score=43.90 Aligned_cols=15 Identities=47% Similarity=1.207 Sum_probs=7.5
Q ss_pred CCccCCCCCCCCCCC
Q psy10880 116 GDRKCLPGWSGDYCT 130 (166)
Q Consensus 116 G~c~C~~GwtG~~C~ 130 (166)
|.|.|.+||.|..|+
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 788888888888874
No 105
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=82.69 E-value=0.36 Score=43.33 Aligned_cols=28 Identities=25% Similarity=0.489 Sum_probs=24.8
Q ss_pred CCCcccCCCCCCccCCCCCCCCCCCccc
Q psy10880 106 SFGHYTCSHTGDRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 106 ~~ghy~C~~~G~c~C~~GwtG~~C~~~i 133 (166)
+.+|+.|+..++|+|.+||..++|..+.
T Consensus 456 C~~~GVCNn~~~CHC~~GwaPP~C~~~~ 483 (510)
T 3g5c_A 456 CSGNGVCSNELKCVCNRHWIGSDCNTYF 483 (510)
T ss_dssp GGGTEEEBTTSCEEECTTEESTTSCEEC
T ss_pred cCCCCeeCCCCCcCCCCCCCCCCCCCCC
Confidence 5578999999999999999999999764
No 106
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=82.27 E-value=0.16 Score=37.05 Aligned_cols=21 Identities=14% Similarity=0.423 Sum_probs=16.8
Q ss_pred CccC---CCCceeCCCCCccCCCCC
Q psy10880 144 NRTS---RTLFCVLEPSMQLYGNCA 165 (166)
Q Consensus 144 G~C~---~~~~C~C~~G~~G~~~~~ 165 (166)
|.|. ..|.|.|.+||+|. .|+
T Consensus 131 g~C~~~~~~~~c~C~~g~~g~-~Ce 154 (157)
T 1g1t_A 131 GECVETINNYTCKCDPGFSGL-KCE 154 (157)
T ss_dssp EEEEEETTEEEEEECTTEEST-TSC
T ss_pred CEeecCCCCeeEECCCCccCc-ccc
Confidence 6675 35899999999998 665
No 107
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=81.73 E-value=0.43 Score=29.59 Aligned_cols=16 Identities=25% Similarity=0.650 Sum_probs=13.0
Q ss_pred CccCCCCCCCCCCCcc
Q psy10880 117 DRKCLPGWSGDYCTKA 132 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~ 132 (166)
.|+|.+||+|..|+..
T Consensus 31 ~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 31 SCVCDEGYIGARCERV 46 (50)
T ss_dssp EECCCTTEETTTTCEE
T ss_pred EEECCCCcccCCCCee
Confidence 4589999999999764
No 108
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=80.61 E-value=0.33 Score=43.65 Aligned_cols=20 Identities=45% Similarity=1.069 Sum_probs=0.0
Q ss_pred CcccCCCCCCccCCCCCCCCCCC
Q psy10880 108 GHYTCSHTGDRKCLPGWSGDYCT 130 (166)
Q Consensus 108 ghy~C~~~G~c~C~~GwtG~~C~ 130 (166)
|.+.| |.|+|.+||.|..|+
T Consensus 474 G~~~C---G~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 474 GHLQC---GVCSCAPGRLGRLCE 493 (503)
T ss_dssp -----------------------
T ss_pred eeEeC---CceECcCCCcCCCCC
Confidence 44556 899999999999996
No 109
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=79.39 E-value=1.2 Score=32.65 Aligned_cols=19 Identities=21% Similarity=0.363 Sum_probs=15.0
Q ss_pred CCCccCCCCCCCCCCCccc
Q psy10880 115 TGDRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 115 ~G~c~C~~GwtG~~C~~~i 133 (166)
.+.|.|.+||+|..|++.+
T Consensus 139 ~~~c~C~~g~~g~~C~~~~ 157 (164)
T 3cfw_A 139 NYTCNCDVGYYGPQCQFVQ 157 (164)
T ss_dssp EEEEEECTTCBSSSSCBC-
T ss_pred CceeeeCCCcccccccccc
Confidence 3466999999999998654
No 110
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=78.93 E-value=0.72 Score=31.51 Aligned_cols=13 Identities=38% Similarity=1.099 Sum_probs=6.6
Q ss_pred CccCCCCCCCCCC
Q psy10880 117 DRKCLPGWSGDYC 129 (166)
Q Consensus 117 ~c~C~~GwtG~~C 129 (166)
.|.|.+||+|..|
T Consensus 63 ~C~C~~GYtG~RC 75 (79)
T 1xdt_R 63 SCICHPGYHGERC 75 (79)
T ss_dssp CEEECTTEESTTC
T ss_pred EEEcCCCcccccc
Confidence 4555555555544
No 111
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=77.17 E-value=0.95 Score=28.07 Aligned_cols=15 Identities=27% Similarity=0.674 Sum_probs=11.5
Q ss_pred CccCCCCCCCCCCCc
Q psy10880 117 DRKCLPGWSGDYCTK 131 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~ 131 (166)
.|+|.+||+|..|+.
T Consensus 35 ~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 35 TCKCQQEYFGERCGE 49 (50)
T ss_dssp EEECCSSCCSSSCCC
T ss_pred eEECCCCcccccccc
Confidence 468888888888863
No 112
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=77.12 E-value=1.2 Score=27.66 Aligned_cols=18 Identities=22% Similarity=0.534 Sum_probs=15.2
Q ss_pred eeEEEecCCCCCCCCCCC
Q psy10880 81 YEYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 81 ~~~r~~C~~gyyG~~C~~ 98 (166)
..+.|+|.++|.|..|+.
T Consensus 28 ~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 28 DKPACVCHSGYVGARCEH 45 (50)
T ss_pred CCeEEECCCCCcccCCCc
Confidence 567899999999999875
No 113
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=74.46 E-value=2.5 Score=39.45 Aligned_cols=50 Identities=16% Similarity=0.402 Sum_probs=32.8
Q ss_pred ceeeeceeEEEecCCCCC---CCCCCC--CCCCCCCCCCcccCCC---CCCccCCCCCCC
Q psy10880 75 AHSSMLYEYRVTCDPHYY---GNGCAT--LCRPRDDSFGHYTCSH---TGDRKCLPGWSG 126 (166)
Q Consensus 75 ~~~~l~~~~r~~C~~gyy---G~~C~~--~C~p~~~~~ghy~C~~---~G~c~C~~GwtG 126 (166)
.++.....|+|.|.+||. |..|.. .|.... ..+ .+|.. .+.|.|.+||++
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~-~C~-~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD-TCS-QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEECCCCCSSSS-SCT-TTCCBCSSCBCCCCCSSEEC
T ss_pred cccCCCCCcccCCCCCCccCCCCccccCcccCCCC-CCC-CeeecCCCCceeecCCCCEe
Confidence 456667899999999995 777864 464211 111 24542 246799999975
No 114
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=74.39 E-value=2.1 Score=26.50 Aligned_cols=25 Identities=20% Similarity=0.585 Sum_probs=18.9
Q ss_pred cceeee--ceeEEEecCCCCCCCCCCC
Q psy10880 74 SAHSSM--LYEYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 74 ~~~~~l--~~~~r~~C~~gyyG~~C~~ 98 (166)
|.+..+ ...+.|+|+++|.|..|+.
T Consensus 23 G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 23 GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CEEEEecCCCCeeEECCCCcccccccc
Confidence 455433 2467899999999999975
No 115
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=74.36 E-value=1.3 Score=39.99 Aligned_cols=30 Identities=23% Similarity=0.486 Sum_probs=19.3
Q ss_pred ccccccceee-eceeEEEecC-CCCCCCCCCC
Q psy10880 69 EDEHKSAHSS-MLYEYRVTCD-PHYYGNGCAT 98 (166)
Q Consensus 69 ~~~~~~~~~~-l~~~~r~~C~-~gyyG~~C~~ 98 (166)
+..++|.++. ....|+|.|. +||+|..|+.
T Consensus 9 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 3556666666 4556777777 7777777754
No 116
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=73.98 E-value=0.89 Score=31.06 Aligned_cols=17 Identities=29% Similarity=0.704 Sum_probs=12.7
Q ss_pred eEEEecCCCCCCCCCCC
Q psy10880 82 EYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 82 ~~r~~C~~gyyG~~C~~ 98 (166)
.+.|.|.++|.|..|+.
T Consensus 61 ~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 61 APSCICHPGYHGERCHG 77 (79)
T ss_dssp BCCEEECTTEESTTCCE
T ss_pred CeEEEcCCCcccccccc
Confidence 56688888888888764
No 117
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=73.91 E-value=1.3 Score=27.29 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=18.9
Q ss_pred cceeee--ceeEEEecCCCCCCCCCCC
Q psy10880 74 SAHSSM--LYEYRVTCDPHYYGNGCAT 98 (166)
Q Consensus 74 ~~~~~l--~~~~r~~C~~gyyG~~C~~ 98 (166)
|.+..+ ...+.|+|+++|.|..|+.
T Consensus 19 G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 19 GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 555433 2467899999999999985
No 118
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=71.96 E-value=2 Score=30.93 Aligned_cols=17 Identities=47% Similarity=0.872 Sum_probs=14.4
Q ss_pred CccCCCCCCCCCCCccc
Q psy10880 117 DRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i 133 (166)
.|.|.+||+|.+|++.|
T Consensus 141 ~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 141 TCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp EEEECTTEESTTSCEEC
T ss_pred eEECCCCccCccccccC
Confidence 44999999999998754
No 119
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=71.09 E-value=1.9 Score=39.37 Aligned_cols=30 Identities=23% Similarity=0.647 Sum_probs=23.6
Q ss_pred ccccccceeee-ceeEEEecC-CCCCCCCCCC
Q psy10880 69 EDEHKSAHSSM-LYEYRVTCD-PHYYGNGCAT 98 (166)
Q Consensus 69 ~~~~~~~~~~l-~~~~r~~C~-~gyyG~~C~~ 98 (166)
+..++|.++.. ...|.|.|. +||+|..|+.
T Consensus 8 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 46677778743 368899999 9999999987
No 120
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=69.29 E-value=1.9 Score=36.36 Aligned_cols=27 Identities=11% Similarity=0.028 Sum_probs=18.5
Q ss_pred CCCCCC-CccCC---CCceeCCC-CCccCCCCC
Q psy10880 138 PTKALP-NRTSR---TLFCVLEP-SMQLYGNCA 165 (166)
Q Consensus 138 c~~c~n-G~C~~---~~~C~C~~-G~~G~~~~~ 165 (166)
..+|.| |.|.. .|.|.|+. ||.|. .|+
T Consensus 190 ~~pC~n~g~C~~~~~~~~C~C~~~~~~G~-~C~ 221 (410)
T 3asi_A 190 EDSCSNQGVCLQQWDGFSCDCSMTSFSGP-LCN 221 (410)
T ss_dssp TTSSSTTCEEEECSSSEEEECTTTSEEST-TSC
T ss_pred cccCCCCCEecCCCCCceEeccCCcccCC-CCC
Confidence 345555 57763 48999996 89886 554
No 121
>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A
Probab=68.96 E-value=3.5 Score=23.99 Aligned_cols=23 Identities=26% Similarity=0.584 Sum_probs=17.0
Q ss_pred CCCCCCCCCCCCCCCCCCcccCC
Q psy10880 91 YYGNGCATLCRPRDDSFGHYTCS 113 (166)
Q Consensus 91 yyG~~C~~~C~p~~~~~ghy~C~ 113 (166)
.|-+.|.+.|..++++.|...|.
T Consensus 3 ~yD~~C~KPC~T~DDCS~gw~Cq 25 (38)
T 4cpa_I 3 HADPICNKPCKTHDDCSGAWFCQ 25 (38)
T ss_dssp CSCTTTTCBCSSSSSSCCCSSCC
T ss_pred ccccccCCCccCccccccchHHH
Confidence 46788999998888766666664
No 122
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=68.77 E-value=3.4 Score=30.75 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=22.5
Q ss_pred ccccccceeeec--eeE-EEecCCCCCCCCCCC
Q psy10880 69 EDEHKSAHSSML--YEY-RVTCDPHYYGNGCAT 98 (166)
Q Consensus 69 ~~~~~~~~~~l~--~~~-r~~C~~gyyG~~C~~ 98 (166)
..+++|.++... ..+ +|.|+++|.|..|++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 466777776542 345 899999999999976
No 123
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=68.57 E-value=2.7 Score=25.07 Aligned_cols=20 Identities=20% Similarity=0.333 Sum_probs=11.8
Q ss_pred ceeeeceeEEEecCCCCCCC
Q psy10880 75 AHSSMLYEYRVTCDPHYYGN 94 (166)
Q Consensus 75 ~~~~l~~~~r~~C~~gyyG~ 94 (166)
.++....+|+|.|.+||.+.
T Consensus 25 ~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 25 LCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp EEEEETTEEEEECSTTCEEC
T ss_pred EeECCCCCeEEECCCCCeEC
Confidence 34555566666666666543
No 124
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=68.03 E-value=0.86 Score=41.11 Aligned_cols=18 Identities=33% Similarity=0.615 Sum_probs=14.7
Q ss_pred CCccCC-CCCCCCCCCccc
Q psy10880 116 GDRKCL-PGWSGDYCTKAV 133 (166)
Q Consensus 116 G~c~C~-~GwtG~~C~~~i 133 (166)
..|.|. +||+|.+|++++
T Consensus 24 y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 24 YQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp EEEECTTSSEETTTTCEEC
T ss_pred eEeeCCCCCcCCCCCCCCc
Confidence 355999 999999998765
No 125
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=65.32 E-value=0.99 Score=33.59 Aligned_cols=40 Identities=13% Similarity=0.323 Sum_probs=24.3
Q ss_pred CCCCCCCCCccc--cCCCCCC---CCCCccC---CCCceeCCCCCccCC
Q psy10880 122 PGWSGDYCTKAV--QKLSPTK---ALPNRTS---RTLFCVLEPSMQLYG 162 (166)
Q Consensus 122 ~GwtG~~C~~~i--C~~~c~~---c~nG~C~---~~~~C~C~~G~~G~~ 162 (166)
+||++.++...+ |...... |.+ .|. ..|+|.|++||+..+
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~ 160 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHR 160 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECT
T ss_pred cCceeeeeccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECC
Confidence 888887765443 3322211 333 454 248999999998543
No 126
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=64.69 E-value=2.7 Score=31.26 Aligned_cols=17 Identities=18% Similarity=0.345 Sum_probs=15.3
Q ss_pred CccCCCCCCCCCCCccc
Q psy10880 117 DRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i 133 (166)
.|.|++||+|.+|++.+
T Consensus 32 ~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 32 WCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp EEECCTTEESTTSCEES
T ss_pred cccCCCCCCCCceeccc
Confidence 57999999999999875
No 127
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=61.62 E-value=6.1 Score=28.45 Aligned_cols=16 Identities=31% Similarity=0.754 Sum_probs=11.5
Q ss_pred CCcccCCCCCCccCCCCCCCCC
Q psy10880 107 FGHYTCSHTGDRKCLPGWSGDY 128 (166)
Q Consensus 107 ~ghy~C~~~G~c~C~~GwtG~~ 128 (166)
.|.|+| .|++||+|..
T Consensus 126 ~g~y~C------~C~~Gy~g~~ 141 (147)
T 2w86_A 126 RGSFKC------QCPSGMTLDA 141 (147)
T ss_dssp TTEEEE------ECCTTCCBCT
T ss_pred CCCEEe------eCCCCCccCC
Confidence 356777 7888888764
No 128
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=60.55 E-value=2.4 Score=38.63 Aligned_cols=18 Identities=28% Similarity=0.626 Sum_probs=15.2
Q ss_pred CCccCC-CCCCCCCCCccc
Q psy10880 116 GDRKCL-PGWSGDYCTKAV 133 (166)
Q Consensus 116 G~c~C~-~GwtG~~C~~~i 133 (166)
..|.|. +||+|.+|+.+.
T Consensus 23 y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 23 YKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp EEEECTTSSEETTTTCEEC
T ss_pred eEEecCCCCccCCCCCCch
Confidence 466999 999999999863
No 129
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=55.14 E-value=5.5 Score=38.80 Aligned_cols=27 Identities=11% Similarity=0.037 Sum_probs=18.7
Q ss_pred CCCCCC-CccC---CCCceeCC-CCCccCCCCC
Q psy10880 138 PTKALP-NRTS---RTLFCVLE-PSMQLYGNCA 165 (166)
Q Consensus 138 c~~c~n-G~C~---~~~~C~C~-~G~~G~~~~~ 165 (166)
..+|.| |.|. ..+.|.|+ +||+|. .|+
T Consensus 1022 ~~pC~ngG~C~~~~~~~~C~C~~~g~~G~-~C~ 1053 (1245)
T 3qcw_A 1022 EDSCSNQGVCLQQWDGFSCDCSMTSFSGP-LCN 1053 (1245)
T ss_dssp TTSSSSSCEEEEETTEEEEECTTSSCBST-TSC
T ss_pred CCcCCCCCEeCCCCCCCEEECCCCCCCCC-Ccc
Confidence 345555 5776 34899999 699987 554
No 130
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=53.56 E-value=4.3 Score=24.60 Aligned_cols=27 Identities=30% Similarity=0.903 Sum_probs=17.5
Q ss_pred CCCCCCCCCCCCCCcccCCCCCCccCCCCCC----CCCCC
Q psy10880 95 GCATLCRPRDDSFGHYTCSHTGDRKCLPGWS----GDYCT 130 (166)
Q Consensus 95 ~C~~~C~p~~~~~ghy~C~~~G~c~C~~Gwt----G~~C~ 130 (166)
.|+.+|... .|.|+| .|.+||+ |..|.
T Consensus 7 ~C~~~C~n~---~gs~~C------~C~~Gy~L~~d~~tC~ 37 (51)
T 1kig_L 7 GCDQFCREE---RSEVRC------SCAHGYVLGDDSKSCV 37 (51)
T ss_dssp SSSSCCCEE---TTEECC------CCCTTEEECTTSSCEE
T ss_pred CcCCEeEcC---CCCeEE------eCCCCcEECCCCCccc
Confidence 466667542 356777 8899986 45564
No 131
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=47.43 E-value=7.5 Score=34.68 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=24.9
Q ss_pred CCCccCCCCCC--CCCCCccccCCC----------CCCCCCC-cc--CCCCceeCCCCCc
Q psy10880 115 TGDRKCLPGWS--GDYCTKAVQKLS----------PTKALPN-RT--SRTLFCVLEPSMQ 159 (166)
Q Consensus 115 ~G~c~C~~Gwt--G~~C~~~iC~~~----------c~~c~nG-~C--~~~~~C~C~~G~~ 159 (166)
.|+|+|.+||. |..|.. |... |.+|... .- ...+.|.|..||.
T Consensus 262 ~G~C~C~~G~e~~~~~C~a--C~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 262 IGQCLCQAGYEKVEDACQA--CSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFF 319 (536)
T ss_dssp BCCCEECTTEEEETTEEEE--CCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCB
T ss_pred cCcEeccCccccCCceeee--cCCCCCcccCCCCccccCCCCCCCCCCCccEEEEecccc
Confidence 58999999997 444542 3321 2222111 00 1348999999875
No 132
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=45.88 E-value=7.1 Score=25.33 Aligned_cols=13 Identities=8% Similarity=-0.105 Sum_probs=10.1
Q ss_pred ceeCCCCCccCCC
Q psy10880 151 FCVLEPSMQLYGN 163 (166)
Q Consensus 151 ~C~C~~G~~G~~~ 163 (166)
.+.|++||++.++
T Consensus 54 ~~~C~~Gy~~~~~ 66 (71)
T 2kl7_A 54 PNPCPPGYEPDDQ 66 (71)
T ss_dssp CCCSCTTEEEECC
T ss_pred ccCCCCCeeeCCC
Confidence 4589999998754
No 133
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=45.06 E-value=4.8 Score=28.85 Aligned_cols=39 Identities=15% Similarity=0.319 Sum_probs=22.4
Q ss_pred CccCCCCCCCC--CCCccccCCCCCCCCCCccCC----------CCceeCCCCC
Q psy10880 117 DRKCLPGWSGD--YCTKAVQKLSPTKALPNRTSR----------TLFCVLEPSM 158 (166)
Q Consensus 117 ~c~C~~GwtG~--~C~~~iC~~~c~~c~nG~C~~----------~~~C~C~~G~ 158 (166)
+|+|++||+|. .|-+. .+. +.-+||.|.. .-.|.|..++
T Consensus 33 ~CrCl~gY~~dg~~Cv~~--Np~-C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 33 EWRCLLGFKEVGGKCVPA--SIT-CEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp EEEECTTEEECSSSEEEC--CCC-TTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred eEEEECCeeccCCEEEEC--Ccc-hhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 56999999864 34321 111 2224566642 2478888774
No 134
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=43.92 E-value=12 Score=22.77 Aligned_cols=18 Identities=11% Similarity=0.091 Sum_probs=14.2
Q ss_pred ceeeeceeEEEecCCCCC
Q psy10880 75 AHSSMLYEYRVTCDPHYY 92 (166)
Q Consensus 75 ~~~~l~~~~r~~C~~gyy 92 (166)
..+....+|+|.|.+||.
T Consensus 14 ~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 14 FCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp EEEEETTEEEEECCTTEE
T ss_pred EeEcCCCCeEEeCCCCCE
Confidence 356667889999999986
No 135
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=43.30 E-value=9.2 Score=31.80 Aligned_cols=26 Identities=15% Similarity=0.386 Sum_probs=18.0
Q ss_pred cceeeeceeEEEecCCCCCC--CCCCCC
Q psy10880 74 SAHSSMLYEYRVTCDPHYYG--NGCATL 99 (166)
Q Consensus 74 ~~~~~l~~~~r~~C~~gyyG--~~C~~~ 99 (166)
+.+++...+|+|.|.+||+| ..|...
T Consensus 19 a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~ 46 (285)
T 1gl4_A 19 AECRDYATGFCCRCVANYTGNGRQCVAE 46 (285)
T ss_dssp EEEEECSSCEEEEECTTEEECSSSEEET
T ss_pred CEeEcCCCCeEEEcCCCCCCCCCcCCCC
Confidence 45777778888888888884 445443
No 136
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=40.67 E-value=17 Score=27.26 Aligned_cols=15 Identities=13% Similarity=0.259 Sum_probs=11.4
Q ss_pred CCCceeCCCCCccCC
Q psy10880 148 RTLFCVLEPSMQLYG 162 (166)
Q Consensus 148 ~~~~C~C~~G~~G~~ 162 (166)
+.-+|.|++||.=..
T Consensus 107 ~dtvC~C~~G~fc~~ 121 (156)
T 3tje_F 107 QNTKCRCKPNFFCNS 121 (156)
T ss_dssp BCCEEEECTTEECCS
T ss_pred CCCeeeCCCCCEeCC
Confidence 357899999987553
No 137
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=40.50 E-value=13 Score=31.22 Aligned_cols=17 Identities=24% Similarity=0.501 Sum_probs=13.7
Q ss_pred CCccCCC-CCCCCCCCcc
Q psy10880 116 GDRKCLP-GWSGDYCTKA 132 (166)
Q Consensus 116 G~c~C~~-GwtG~~C~~~ 132 (166)
..|.|.. ||+|+.|+.+
T Consensus 206 ~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 206 FSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp EEEECTTTSEESTTSCEE
T ss_pred ceEeccCCcccCCCCCCC
Confidence 3559996 9999999864
No 138
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=35.27 E-value=7.4 Score=27.54 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=8.6
Q ss_pred CccCCCCCCCC
Q psy10880 117 DRKCLPGWSGD 127 (166)
Q Consensus 117 ~c~C~~GwtG~ 127 (166)
+|+|++||+|.
T Consensus 27 ~C~C~~gy~gd 37 (99)
T 1ob1_C 27 ECKCLLNYKQE 37 (99)
T ss_dssp EEEECTTEEEE
T ss_pred EEEecCCeecC
Confidence 45999999864
No 139
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=31.07 E-value=1e+02 Score=21.54 Aligned_cols=11 Identities=18% Similarity=0.226 Sum_probs=6.5
Q ss_pred eCCCCCccCCC
Q psy10880 153 VLEPSMQLYGN 163 (166)
Q Consensus 153 ~C~~G~~G~~~ 163 (166)
.|.+||.-.|.
T Consensus 92 ~C~~Gy~L~G~ 102 (133)
T 2a55_A 92 SCSEGFFLIGS 102 (133)
T ss_dssp CBCTTCBCCSC
T ss_pred EcCCCCEEcCC
Confidence 55666665554
No 140
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=29.80 E-value=27 Score=21.03 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=11.9
Q ss_pred eeeece-eEEEecCCCCC
Q psy10880 76 HSSMLY-EYRVTCDPHYY 92 (166)
Q Consensus 76 ~~~l~~-~~r~~C~~gyy 92 (166)
.+.... +|+|.|.+||.
T Consensus 13 C~n~~ggs~~C~C~~Gy~ 30 (53)
T 2bz6_L 13 CSDHTGTKRSCRCHEGYS 30 (53)
T ss_dssp EEEETTTEEEEECCTTEE
T ss_pred eEcCCCCCEEeeCCCCCE
Confidence 344445 78888888886
No 141
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=28.46 E-value=33 Score=33.33 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=14.4
Q ss_pred CCccCC-CCCCCCCCCccc
Q psy10880 116 GDRKCL-PGWSGDYCTKAV 133 (166)
Q Consensus 116 G~c~C~-~GwtG~~C~~~i 133 (166)
..|.|+ +||+|++|+.+.
T Consensus 1038 ~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1038 FSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp EEEECTTSSCBSTTSCBCC
T ss_pred CEEECCCCCCCCCCccCCC
Confidence 356999 699999998754
No 142
>2jss_B Uncharacterized protein YER030W; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae}
Probab=27.82 E-value=18 Score=23.37 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=12.6
Q ss_pred CCCcccccCchhhhh--hhcccccc
Q psy10880 39 DDDDEVIITCKTLIS--RLTTQRWL 61 (166)
Q Consensus 39 ~~~~~~~~~~~~LIs--R~~~~~~l 61 (166)
++|+-..|.+..+|. |.+....|
T Consensus 25 ~eD~l~eId~sNII~~GRRTRGk~I 49 (62)
T 2jss_B 25 EEDDLAEIDTSNIITSGRRTRGKVI 49 (62)
T ss_dssp GGSCSCCCCGGGTCCCSSCCCCCCC
T ss_pred ccccccccchhhcccCCcccCCcee
Confidence 334444778887774 44443444
No 143
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=25.69 E-value=22 Score=31.19 Aligned_cols=17 Identities=29% Similarity=1.130 Sum_probs=11.4
Q ss_pred CccCCCCCCCCCCCccc
Q psy10880 117 DRKCLPGWSGDYCTKAV 133 (166)
Q Consensus 117 ~c~C~~GwtG~~C~~~i 133 (166)
.|+|-.||.|..|....
T Consensus 398 ~C~Cy~gw~G~~C~~~~ 414 (424)
T 2pe4_A 398 KCRCYPGWQAPWCERKS 414 (424)
T ss_dssp EEEECTTBCTTTTCSBC
T ss_pred EeeccCCCCcccccCCC
Confidence 34777777777776554
No 144
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=22.45 E-value=38 Score=27.28 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=10.6
Q ss_pred CCceeCCCCCccC
Q psy10880 149 TLFCVLEPSMQLY 161 (166)
Q Consensus 149 ~~~C~C~~G~~G~ 161 (166)
.|+|.|+.||+-.
T Consensus 289 ~~~C~C~~g~~l~ 301 (318)
T 3sov_A 289 FYQCACPTGVKLL 301 (318)
T ss_dssp SEEEECSTTCCBC
T ss_pred CeEEECCCCCEEC
Confidence 3799999999743
Done!