BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10887
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95NM6|NUCG_CAEEL Endonuclease G, mitochondrial OS=Caenorhabditis elegans GN=cps-6
PE=1 SV=1
Length = 308
Score = 246 bits (629), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 151/204 (74%)
Query: 1 MKYGFPSLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
MK+G+P ++R+++DFVLSYD + RTA+WV EHLT E ++E V+R EF D +
Sbjct: 70 MKHGYPGFTNVRTYEDFVLSYDYKTRTAHWVCEHLTPERLKHAEGVDRKLCEFKPDITFP 129
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEK 120
+ F +N+DYK SG+DRGHLAAAGNH+ +Q +DQTF LSN+SPQVG GFNRDKW +LE
Sbjct: 130 QKFLSQNTDYKCSGFDRGHLAAAGNHRKSQLAVDQTFYLSNMSPQVGRGFNRDKWNDLEM 189
Query: 121 HSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENENGK 180
H R++ K+ N Y+ TGPLYLP +GKKY+ Y+VIGD+NVAVPTHFFK+ + E GK
Sbjct: 190 HCRRVAKKMINSYIITGPLYLPKLEGDGKKYIKYQVIGDNNVAVPTHFFKVALFEVTPGK 249
Query: 181 LVMENYVLPNAVISDSTPLTSFMV 204
+E+Y+LPNAVI D+ ++ F V
Sbjct: 250 FELESYILPNAVIEDTVEISKFHV 273
>sp|O08600|NUCG_MOUSE Endonuclease G, mitochondrial OS=Mus musculus GN=Endog PE=2 SV=1
Length = 294
Score = 219 bits (559), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 139/203 (68%), Gaps = 3/203 (1%)
Query: 2 KYGFPSLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIHE 61
KYG P + LRS + +VLSYD R R A WV E L E +RS +F EDDS+H
Sbjct: 63 KYGLPGVAQLRSRESYVLSYDPRTRGALWVLEQLRPERLRGDG--DRSACDFREDDSVHA 120
Query: 62 YFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEKH 121
Y R N+DY+ SG+DRGHLAAA NH+ +Q+ +D TF LSN++PQV N++ W LE++
Sbjct: 121 YHRATNADYRGSGFDRGHLAAAANHRWSQRAMDDTFYLSNVAPQV-PHLNQNAWNNLERY 179
Query: 122 SRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENENGKL 181
SR L + Y NVYVCTGPL+LP +GK YV Y+VIG ++VAVPTHFFK+++ E G++
Sbjct: 180 SRSLTRTYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQI 239
Query: 182 VMENYVLPNAVISDSTPLTSFMV 204
+ +YV+PNA + ++ PL F+V
Sbjct: 240 ELRSYVMPNAPVDETIPLERFLV 262
>sp|P38447|NUCG_BOVIN Endonuclease G, mitochondrial OS=Bos taurus GN=ENDOG PE=1 SV=1
Length = 299
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 137/203 (67%), Gaps = 3/203 (1%)
Query: 2 KYGFPSLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIHE 61
KYG P + L+S +VL YD R R A WV E L E NRS +F EDDS+H
Sbjct: 68 KYGLPGVAQLKSRASYVLCYDPRTRGALWVVEQLRPEGLRGDG--NRSSCDFHEDDSVHA 125
Query: 62 YFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEKH 121
Y R N+DY+ SG+DRGHLAAA NH+ +QK +D TF LSN++PQV N++ W LEK+
Sbjct: 126 YHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQV-PHLNQNAWNNLEKY 184
Query: 122 SRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENENGKL 181
SR L + Y NVYVCTGPL+LP +GK YV Y+VIG ++VAVPTHFFK+++ E G++
Sbjct: 185 SRSLTRTYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQI 244
Query: 182 VMENYVLPNAVISDSTPLTSFMV 204
+ +YV+PNA + ++ PL F+V
Sbjct: 245 ELRSYVMPNAPVDEAIPLEHFLV 267
>sp|Q14249|NUCG_HUMAN Endonuclease G, mitochondrial OS=Homo sapiens GN=ENDOG PE=1 SV=4
Length = 297
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 137/203 (67%), Gaps = 3/203 (1%)
Query: 2 KYGFPSLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIHE 61
KYG P L L+S + +VL YD R R A WV E L E +R + +F EDDS+H
Sbjct: 66 KYGLPGLAQLKSRESYVLCYDPRTRGALWVVEQLRPERLRGDG--DRRECDFREDDSVHA 123
Query: 62 YFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEKH 121
Y R N+DY+ SG+DRGHLAAA NH+ +QK +D TF LSN++PQV N++ W LEK+
Sbjct: 124 YHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQV-PHLNQNAWNNLEKY 182
Query: 122 SRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENENGKL 181
SR L + Y NVYVCTGPL+LP +GK YV Y+VIG ++VAVPTHFFK+++ E G++
Sbjct: 183 SRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQI 242
Query: 182 VMENYVLPNAVISDSTPLTSFMV 204
+ YV+PNA + ++ PL F+V
Sbjct: 243 ELRTYVMPNAPVDEAIPLERFLV 265
>sp|P08466|NUC1_YEAST Mitochondrial nuclease OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NUC1 PE=1 SV=1
Length = 329
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 142/225 (63%), Gaps = 9/225 (4%)
Query: 2 KYGFPS-LDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
KYGFP + L++ ++F+ Y+R+ + YWV EH+T E+ A A +R S F ED+ I
Sbjct: 61 KYGFPGPIHDLQNREEFISCYNRQTQNPYWVLEHITPESLAARNA-DRKNSFFKEDEVIP 119
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEK 120
E FRG+ DY SGYDRGH A A + K +Q+ +D TF LSN+ PQVG GFNRD WA LE
Sbjct: 120 EKFRGKLRDYFRSGYDRGHQAPAADAKFSQQAMDDTFYLSNMCPQVGEGFNRDYWAHLEY 179
Query: 121 HSRKLLKQYPNVYVCTGPLYLPMKSPNGKKY-VNYEVIGD-SNVAVPTHFFKIIVAENEN 178
R L K+Y +V + TGPLYLP K P K+ VNYEVIG+ ++AVPTHFFK+IVAE
Sbjct: 180 FCRGLTKKYKSVRIVTGPLYLPKKDPIDNKFRVNYEVIGNPPSIAVPTHFFKLIVAEAPT 239
Query: 179 GKLVMEN-----YVLPNAVISDSTPLTSFMVSTYLLKCSYIINLL 218
E+ +VLPN IS+ T LT F V L+ S + LL
Sbjct: 240 ANPAREDIAVAAFVLPNEPISNETKLTDFEVPIDALERSTGLELL 284
>sp|P81203|NUC1_CUNEE Nuclease C1 OS=Cunninghamella echinulata var. echinulata GN=NUC1CE
PE=1 SV=1
Length = 252
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 130/207 (62%), Gaps = 6/207 (2%)
Query: 1 MKYGFPSLDSLRSF---DDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDD 57
+++G P + R F + +V+SY+RR+R A W EHLT ++ + V+R S+F ED
Sbjct: 8 LQFGDPG--TARDFLERESYVISYNRRDRVASWTGEHLTADSLKTGDGVDRDHSKFKEDP 65
Query: 58 SIHEYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAE 117
+ FR +DY SG+DRGH+A AG+ A Q +DQTF LSN+SPQVG GFNR WA
Sbjct: 66 DVPSLFRSTLADYSGSGFDRGHMAPAGDAVATQPAMDQTFYLSNMSPQVGIGFNRHYWAY 125
Query: 118 LEKHSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENE 177
LE R L K++ +VYV TGPL+LP K +GK V Y V+ NVAVPTHF+K+I+
Sbjct: 126 LEGFCRSLTKKFSDVYVFTGPLFLPTKGSDGKYTVTYNVL-QGNVAVPTHFYKVILVPQG 184
Query: 178 NGKLVMENYVLPNAVISDSTPLTSFMV 204
+ K ++LPN I TPLT+F V
Sbjct: 185 DNKYAYGAFILPNQAIDTKTPLTNFKV 211
>sp|P81204|NUC1_SYNRA Nuclease OS=Syncephalastrum racemosum PE=1 SV=1
Length = 320
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 7/211 (3%)
Query: 1 MKYGFPS-LDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSI 59
+K G P + L ++LSY+RR+R A+WV EHLT + + V+R KS F ED I
Sbjct: 76 LKLGNPGPVSDLLERSGYILSYNRRDRLAHWVGEHLTSASLQAGQGVDRDKSNFQEDTDI 135
Query: 60 HEYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELE 119
E FR DY SGYDRGH A A + ++Q+ +D+TF+LSN++PQVG GFNR WA LE
Sbjct: 136 PEMFRAHLKDYVSSGYDRGHQAPAADDLSSQEAMDETFLLSNMAPQVGVGFNRHYWAYLE 195
Query: 120 KHSRKLLKQYPNVYVCTGPLYLPMKSPNGKK----YVNYEVIGDS--NVAVPTHFFKIIV 173
R L + + +VYV TGPL+LP + G+K + Y +G + NV VPTHFFKI +
Sbjct: 196 GFMRDLTQNFTDVYVYTGPLFLPSAASTGRKNPAYSIEYPFLGATTPNVPVPTHFFKIAL 255
Query: 174 AENENGKLVMENYVLPNAVISDSTPLTSFMV 204
+ + + +VLPN I STPLT+F V
Sbjct: 256 TTTASSEYALGAFVLPNQAIDSSTPLTNFKV 286
>sp|Q10480|PNU1_SCHPO Nuclease 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=pnu1 PE=2 SV=2
Length = 322
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 134/222 (60%), Gaps = 6/222 (2%)
Query: 2 KYGFPS-LDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
+YG P + R ++ +DRR R ++ E +T+E+ + NR SEF DD+I
Sbjct: 65 QYGIPGPVADQRVNHGYMSVFDRRTRNPFYTAETITQESLNQRKG-NRRYSEFVPDDNIP 123
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEK 120
E F+ + DY+ SGYDRGH A + K +Q+ +++TF LSN+ PQVG GFNR+ WA E
Sbjct: 124 EMFQAKLGDYRGSGYDRGHQVPAADCKFSQEAMNETFYLSNMCPQVGDGFNRNYWAYFED 183
Query: 121 HSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGD-SNVAVPTHFFKIIVAENEN- 178
R+L +Y +V + TGPLYLP K+ G+ V Y VIG+ NVAVPTHFFK+I+AE
Sbjct: 184 WCRRLTSKYGSVTIMTGPLYLPKKNERGQWEVQYRVIGNPPNVAVPTHFFKVIIAEKSGE 243
Query: 179 --GKLVMENYVLPNAVISDSTPLTSFMVSTYLLKCSYIINLL 218
+ +VLPN I+D+ PL +F V +++ + + +L
Sbjct: 244 PTSSPSVAAFVLPNKPIADNFPLKNFAVPVEVVERASGLEIL 285
>sp|Q502K1|EXOG_DANRE Nuclease EXOG, mitochondrial OS=Danio rerio GN=exog PE=2 SV=2
Length = 343
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 127/210 (60%), Gaps = 12/210 (5%)
Query: 2 KYGFP-SLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
++G P S R + + VLSYD+ +RT WV EHL+ +T NR + +F D S+
Sbjct: 45 RFGLPESGAESRFYTNHVLSYDQTHRTPRWVAEHLS--STRLLGEANRKQCKFRPDPSVP 102
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQV---GAGFNRDKWAE 117
E F N DY SG+ RGH+A AG++K++++ + +TF LSNI PQ AGF W
Sbjct: 103 ELFTAHNEDYLKSGWSRGHMAPAGDNKSSEQAMAETFYLSNIVPQNYENNAGF----WNR 158
Query: 118 LEKHSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENE 177
LE + R+L +++ +V+V +GPL P + +GKK V+Y++IG VAVPTH +K+I+A+ +
Sbjct: 159 LEMYCRELTEKFSDVWVVSGPLMKPQITDDGKKTVSYQLIGKDEVAVPTHLYKVILAQKD 218
Query: 178 --NGKLVMENYVLPNAVISDSTPLTSFMVS 205
+ L + +V+PNA I L F VS
Sbjct: 219 PSSDALAVGAFVVPNAPIGFQHQLQEFQVS 248
>sp|Q9Y2C4|EXOG_HUMAN Nuclease EXOG, mitochondrial OS=Homo sapiens GN=EXOG PE=1 SV=2
Length = 368
Score = 143 bits (361), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 7/208 (3%)
Query: 2 KYGFP-SLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
++GFP + R + + LSYD+ R WV EH++K +R +F D +I
Sbjct: 64 QFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGD--ADRKHCKFKPDPNIP 121
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEK 120
F N DY SG+ RGH+A AGN+K + K + +TF LSNI PQ N W +E
Sbjct: 122 PTFSAFNEDYVGSGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQ-DFDNNSGYWNRIEM 180
Query: 121 HSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENEN-- 178
+ R+L +++ +V+V +GPL LP +GKK V+Y+VIG+ NVAVP+H +K+I+A +
Sbjct: 181 YCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVS 240
Query: 179 -GKLVMENYVLPNAVISDSTPLTSFMVS 205
L + +V+PN I LT F VS
Sbjct: 241 TEPLALGAFVVPNEAIGFQPQLTEFQVS 268
>sp|Q8C163|EXOG_MOUSE Nuclease EXOG, mitochondrial OS=Mus musculus GN=Exog PE=2 SV=1
Length = 368
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 2 KYGFP-SLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
++GFP + R + + LSYD+ R WV EH++K+ +R +F D S+
Sbjct: 64 QFGFPLAGTETRRYTNHALSYDQAKRVPRWVLEHISKDKIIGD--ADRKHCKFKPDPSVP 121
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEK 120
F N DY SG+ RGH+A AGN+K + + + +TF LSNI PQ N W +E
Sbjct: 122 SAFSALNEDYIGSGWSRGHMAPAGNNKFSSEAMAETFYLSNIVPQ-NFDNNSGYWNRIEM 180
Query: 121 HSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAE---NE 177
+ R+L +++ +V++ +GPL LP +G K V+Y+VIG+ NVAVP+H +K+I+A
Sbjct: 181 YCRELTERFEDVWIVSGPLTLPHTRNDGTKTVSYQVIGEDNVAVPSHLYKVILARRSPES 240
Query: 178 NGKLVMENYVLPNAVISDSTPLTSFMVSTYLLK 210
L + +V+PN I + L+ F VS + L+
Sbjct: 241 TEPLALGAFVVPNKAIGFQSQLSEFQVSLHDLE 273
>sp|Q0IH72|EXOG_XENLA Nuclease EXOG, mitochondrial OS=Xenopus laevis GN=exog PE=2 SV=1
Length = 358
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 12/210 (5%)
Query: 2 KYGFP-SLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIH 60
+YGFP + R + + L+YD RT WV EHL++ T S +R +F D +I
Sbjct: 56 EYGFPLTGTEARQYINHALAYDPAKRTPKWVIEHLSRTKTVGS--ADRKHCKFKPDPNIP 113
Query: 61 EYFRGRNSDYKYSGYDRGHLAAAGNHKANQKHLDQTFVLSNISPQV---GAGFNRDKWAE 117
+ F N DY SG+ RGH+A AG++K + + + +TF LSNI PQ AGF W
Sbjct: 114 KMFSATNEDYLGSGWTRGHMAPAGDNKFSTEAMAETFYLSNIVPQNYENNAGF----WNR 169
Query: 118 LEKHSRKLLKQYPNVYVCTGPLYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENE 177
+E + R L K++ +V+V +GPL LP +GKK V YEVIG VAVP+H +K+I+ +
Sbjct: 170 MEMYCRDLTKRFEDVWVVSGPLELPTSHEDGKKRVTYEVIGADEVAVPSHLYKVILVREK 229
Query: 178 NGK--LVMENYVLPNAVISDSTPLTSFMVS 205
+ L + +V+PN+ I L + V
Sbjct: 230 GSEQPLAIGAFVVPNSPIGFDHQLPEYKVQ 259
>sp|P38446|NUCA_NOSS1 Nuclease OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=nucA PE=1
SV=1
Length = 274
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 15 DDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIHE-YFRGRNSDYKYS 73
+ + LSY+ TA WV L N+++ R + F D ++ + R S Y S
Sbjct: 63 NQYALSYNNSKGTANWVAWQL---NSSWLGNAER-QDNFRPDKTLPAGWVRVTPSMYSGS 118
Query: 74 GYDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEKHSRKLLKQYPNVY 133
GYDRGH+A + + + TF+++N+ PQ NR+ W LE + R+L+ Q +Y
Sbjct: 119 GYDRGHIAPSADRTKTTEDNAATFLMTNMMPQT-PDNNRNTWGNLEDYCRELVSQGKELY 177
Query: 134 VCTGP---LYLPMKSPNGKKYVNYEVIGDSNVAVPTHFFKIIVAENENG 179
+ GP L P+K GK V VP +KI+V + G
Sbjct: 178 IVAGPNGSLGKPLK---GK------------VTVPKSTWKIVVVLDSPG 211
>sp|P13717|NUCA_SERMA Nuclease OS=Serratia marcescens GN=nucA PE=1 SV=2
Length = 266
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 17 FVLSYDRRNRTAYWVFEHLTKENTAYSEAVN-RSKSEFFEDDSIHEY-FRGRNSDYKYSG 74
+ L+ + + A WV H+TK+ A + N ++ D++ + G N+ K
Sbjct: 49 YTLNNNSTTKFANWVAYHITKDTPASGKTRNWKTDPALNPADTLAPADYTGANAALK--- 105
Query: 75 YDRGHLAAAGNHKANQKHLDQTFVLSNISPQVGAGFNRDKWAELEKHSRKLLKQ--YPNV 132
DRGH A + A + LSNI+PQ + N+ WA LE RKL+ + +V
Sbjct: 106 VDRGHQAPLASL-AGVSDWESLNYLSNITPQ-KSDLNQGAWARLEDQERKLIDRADISSV 163
Query: 133 YVCTGPLY 140
Y TGPLY
Sbjct: 164 YTVTGPLY 171
>sp|Q71H61|ILDR2_HUMAN Immunoglobulin-like domain-containing receptor 2 OS=Homo sapiens
GN=ILDR2 PE=2 SV=1
Length = 639
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 7 SLDSLRSFDDFVLSYDRRNRTAYWVFEHLTKENTAYSEAVNRSKSEFFEDDSIHEYFRGR 66
S+D L +F D SY +R R A H + + + + +R+ S F++DDS+ EY+ R
Sbjct: 426 SMDELAAFAD---SYGQRPRRAD-GNSHEARGGSRFERSESRAHSGFYQDDSLEEYYGQR 481
Query: 67 N-SDYKYSGYDRG-HLAAAGNHKANQKHL 93
+ S + DRG + A A HL
Sbjct: 482 SRSREPLTDADRGWAFSPARRRPAEDAHL 510
>sp|Q9R1E6|ENPP2_MOUSE Ectonucleotide pyrophosphatase/phosphodiesterase family member 2
OS=Mus musculus GN=Enpp2 PE=1 SV=3
Length = 862
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 22/116 (18%)
Query: 97 FVLSNISPQVGAGFNRDKWAELEKHSRKLLKQYPN----VYVCTGPLYLPMKSPNGKKYV 152
F+++N+ P A F R W + R L+K+Y + V V +GP++ + NG + +
Sbjct: 696 FLVTNMVPMYPA-FKR-VWTYFQ---RVLVKKYASERNGVNVISGPIF--DYNYNGLRDI 748
Query: 153 NYEV---IGDSNVAVPTHFFKIIV--------AENENGKLVMENYVLPNAVISDST 197
E+ + S++ VPTH++ II A+ +G L + +++LP+ +D +
Sbjct: 749 EDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDES 804
>sp|Q64610|ENPP2_RAT Ectonucleotide pyrophosphatase/phosphodiesterase family member 2
OS=Rattus norvegicus GN=Enpp2 PE=1 SV=2
Length = 887
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 28/119 (23%)
Query: 97 FVLSNISPQVGAGFNRDKWAELEKHSRKLLKQYPN----VYVCTGPLY------LPMKSP 146
F+++N+ P A F R WA + R L+K+Y + V V +GP++ L
Sbjct: 721 FLVTNMVPMYPA-FKR-VWAYFQ---RVLVKKYASERNGVNVISGPIFDYNYDGLRDTED 775
Query: 147 NGKKYVNYEVIGDSNVAVPTHFFKIIV--------AENENGKLVMENYVLPNAVISDST 197
K+YV S++ VPTH++ II A+ +G L + +++LP+ +D +
Sbjct: 776 EIKQYVE-----GSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDES 829
>sp|C5P230|CHI1_COCP7 Endochitinase 1 OS=Coccidioides posadasii (strain C735) GN=CTS1
PE=3 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 75 YDRGHLAAAGNHKANQ-KHLDQTFVLSNISPQVGAGFNRDKWAELEKH--SRKLLKQYPN 131
Y RGH + KA+Q H+ + +NI P G + D WA+ +KH K + N
Sbjct: 50 YGRGHNPQ--DLKADQFTHI--LYAFANIRPS-GEVYLSDTWADTDKHYPGDKWDEPGKN 104
Query: 132 VYVCTGPLYL 141
VY CT +YL
Sbjct: 105 VYGCTKQMYL 114
>sp|Q3YRK9|RL3_EHRCJ 50S ribosomal protein L3 OS=Ehrlichia canis (strain Jake) GN=rplC
PE=3 SV=1
Length = 231
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 106 VGAGFNRDKWAELEKHSRKLLKQYPNVYVC------TGPLYLPMKSPNGKKYVNYEVIGD 159
+G GF +++H+ K LK V + TG P + GKK + +G
Sbjct: 115 LGKGF----AGVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGH--LGS 168
Query: 160 SNVAVPTHFFKIIVAENENGKLVMENYVLPNA---------VISDSTPLTSFMVSTYLLK 210
S V V K+I+ + E LV++ +P A + S P SF V T LK
Sbjct: 169 SKVTVQN--LKVILVDQERSLLVVKGNNIPGAKGSYVFVKDAVKKSVPKNSFPVCTEDLK 226
Query: 211 CSYII 215
I+
Sbjct: 227 LDNIV 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,002,139
Number of Sequences: 539616
Number of extensions: 3795316
Number of successful extensions: 8043
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 8004
Number of HSP's gapped (non-prelim): 26
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)