BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10889
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KI56|CSN7B_BOVIN COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2
SV=1
Length = 264
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 2/221 (0%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE LPE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 69 LFAYGTYPDYIANKE--SLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLL 186
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS 231
IE Q+ +AN K H ++ E+ NIKK+LK + S
Sbjct: 187 GIEQQVLRANQYKENHSRTQQQVEAEVTNIKKTLKATASSS 227
>sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1
SV=1
Length = 264
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 2/221 (0%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE LPE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 69 LFAYGTYPDYIANKE--SLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLL 186
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS 231
IE Q+ +AN K H ++ E+ NIKK+LK + S
Sbjct: 187 GIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSS 227
>sp|Q8BV13|CSN7B_MOUSE COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1
SV=1
Length = 264
Score = 228 bits (581), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 151/222 (68%), Gaps = 2/222 (0%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 8 SSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
LFA+GTY DY+ KE LPE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+
Sbjct: 68 NLFAYGTYPDYIANKE--SLPELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNL 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 126 RELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS 231
IE Q+ +AN K H ++ E+ NIKK+LK + S
Sbjct: 186 LGIEQQVLRANQYKENHHRTQQQVEAEVSNIKKTLKATASSS 227
>sp|Q5R762|CSN7A_PONAB COP9 signalosome complex subunit 7a OS=Pongo abelii GN=COPS7A PE=2
SV=1
Length = 275
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 145/211 (68%), Gaps = 2/211 (0%)
Query: 15 EQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAH 74
EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 75 GTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLED 134
GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NVR LED
Sbjct: 73 GTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLED 130
Query: 135 LIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET 194
L+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL IE
Sbjct: 131 LVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEE 190
Query: 195 QIGKANSEKHQHLAHSNAIDMEILNIKKSLK 225
Q+ +AN K Q L I+ E+ N+KK++K
Sbjct: 191 QVSRANQHKEQQLGLKQQIESEVANLKKTIK 221
>sp|Q9UBW8|CSN7A_HUMAN COP9 signalosome complex subunit 7a OS=Homo sapiens GN=COPS7A PE=1
SV=1
Length = 275
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 145/211 (68%), Gaps = 2/211 (0%)
Query: 15 EQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAH 74
EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 75 GTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLED 134
GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NVR LED
Sbjct: 73 GTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLED 130
Query: 135 LIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET 194
L+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL IE
Sbjct: 131 LVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEE 190
Query: 195 QIGKANSEKHQHLAHSNAIDMEILNIKKSLK 225
Q+ +AN K Q L I+ E+ N+KK++K
Sbjct: 191 QVSRANQHKEQQLGLKQQIESEVANLKKTIK 221
>sp|Q9CZ04|CSN7A_MOUSE COP9 signalosome complex subunit 7a OS=Mus musculus GN=Cops7a PE=1
SV=2
Length = 275
Score = 221 bits (563), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 144/211 (68%), Gaps = 2/211 (0%)
Query: 15 EQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAH 74
EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 75 GTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLED 134
GTY DYL E LP +T QK KL++L++VTL+ + KCIPY LL+ L + NVR LED
Sbjct: 73 GTYADYLA--EARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLED 130
Query: 135 LIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET 194
L+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL IE
Sbjct: 131 LVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEE 190
Query: 195 QIGKANSEKHQHLAHSNAIDMEILNIKKSLK 225
Q+ +AN K Q L I+ E+ N+KK++K
Sbjct: 191 QVSRANQHKEQQLGLKQQIESEVANLKKTIK 221
>sp|Q9V4S8|CSN7_DROME COP9 signalosome complex subunit 7 OS=Drosophila melanogaster
GN=CSN7 PE=1 SV=2
Length = 278
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 158/229 (68%), Gaps = 5/229 (2%)
Query: 14 LEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFA 73
LE+F +LAK++ GAA +++I+Q LEAP +F+F EL+ P + +L P + ++ L LFA
Sbjct: 20 LEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFA 79
Query: 74 HGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLE 133
+GTY++Y Q E K E+T +KKLQ+LTIV+L++++K IPY LL EL+I NVR LE
Sbjct: 80 YGTYKEYRAQPE--KFIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLE 137
Query: 134 DLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE 193
D+IIEAIY+DIIHGKL Q LE+D+A GRDI PG ++ QAW +SC +V IE
Sbjct: 138 DIIIEAIYADIIHGKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIE 197
Query: 194 TQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQSQDTDDMMGSDN 242
QI AN+EK + L + ++ +++N+KK LK+QT+ D+D+ M D
Sbjct: 198 MQIKYANAEKSKRLINKERVEQDLINLKKVLKSQTS---DSDESMQIDT 243
>sp|Q55BD5|CSN7_DICDI COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum
GN=csn7 PE=1 SV=1
Length = 259
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 151/255 (59%), Gaps = 3/255 (1%)
Query: 1 MVAEKASGVGTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTS 60
M ++ + N L+QFV+LAK++KG A V +I++ L P +F+F EL+DMP +++L +
Sbjct: 1 MTTQQETLTDGNALKQFVVLAKSSKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKET 60
Query: 61 PHAGYYHLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKL 120
YY LL +FA+G++ DY +K+ L P++T KL+ LTIV LS S IPY L
Sbjct: 61 EFKNYYDLLLIFAYGSFIDYKNKKDSL--PQLTPQMITKLKQLTIVFLSSTSNVIPYSVL 118
Query: 121 LKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQA 180
++++I+NVR+LEDLII++IY +II GKLDQ+N LE+DF+IGRD+ P + +MI
Sbjct: 119 QEQIEITNVRELEDLIIDSIYQNIIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNN 178
Query: 181 WSDSCANVLKAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQSQ-DTDDMMG 239
WS + +L I I ++ Q+ + + K + KN + Q D M
Sbjct: 179 WSSTSQKLLDDISGLITHSDKVHLQYRKEKEEFESKFEIAKLNTKNDSPAEQLYYDSMEY 238
Query: 240 SDNVVDKIGKKYKIK 254
SD V K G K K K
Sbjct: 239 SDEVRMKKGPKIKGK 253
>sp|Q94JU3|CSN7_ARATH COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7
PE=1 SV=1
Length = 260
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 14 LEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFA 73
++Q V A T K A LI + P +F F E++ +P + +L+ + + Y LL+LFA
Sbjct: 11 IDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDSVYLDLLRLFA 70
Query: 74 HGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLE 133
HGT+ DY + +LP ++ Q KL+ LT++TL+ +K +PYD L+ ELD+SNVR+LE
Sbjct: 71 HGTWGDY--KCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELE 128
Query: 134 DLII-EAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
D +I E +Y+ I+ GKLDQ E+ FA GRD+ PG + NM+ W ++ N+L +I
Sbjct: 129 DFLINECMYAGIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISI 188
Query: 193 ETQIGKANSEKHQHLAHSNAIDMEILNIKKSL 224
+ +I A++ H + + +KKSL
Sbjct: 189 QDKIKWADNMSEMDKKHRKEAEEGVEEVKKSL 220
>sp|Q7SGS1|CSN7A_NEUCR COP9 signalosome complex subunit 7a OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=csn-7a PE=1 SV=1
Length = 417
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 25/218 (11%)
Query: 12 NPLEQFVLLAKT-TKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTS-PHAGYYHLL 69
N LE F++L+K+ T AA +L+ +V AP F+F EL+ P I+ L+ S + Y LL
Sbjct: 8 NALEPFIVLSKSATSPRAAADLVTRVTSAPNTFIFTELLQTPQIQSLEYSHEFSSYLTLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTL-SLESKCIP------------ 116
++F+HGTY DY+ LP + QK KL+ L+++TL + + +P
Sbjct: 68 QIFSHGTYADYIANAS--ALPALNDDQKLKLRQLSLLTLVANDGSNVPLDYDAMQRENNQ 125
Query: 117 -------YDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELD-FAIGRDINP 168
Y L + L++S+ R+LE+L+I AIY+ +I G+LD N ++++ A RD+
Sbjct: 126 AQPPNQSYASLTRRLELSSARELEELVISAIYAGLIEGQLDPANEMVQINSVAALRDVPA 185
Query: 169 GDVTNMITEFQAWSDSCANVLKAIETQIGKANSEKHQH 206
V +++ Q W+ C L+ +E + E +
Sbjct: 186 RGVNGLLSSLQGWAGRCQATLQELEATMANLRDEADRR 223
>sp|Q00648|CSN7_EMENI COP9 signalosome complex subunit 7 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=csnG PE=1 SV=1
Length = 327
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 17/216 (7%)
Query: 14 LEQFVLLAKTTKGAAA---VELIKQVLEAPGIFMFKELIDMPLIKELDTSPHA-----GY 65
L+ F+ L ++ + +I +P ++F EL++ P ++ L SP Y
Sbjct: 12 LQSFIALTDSSSATSPRYIASIITNATSSPHTYVFAELLERPAVQAL-RSPDTPAEFQSY 70
Query: 66 YHLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELD 125
LL++FA GT+QDY ++ LP +++ Q +KL+ LT+++L+ K + Y+ L+ L
Sbjct: 71 LTLLEIFAWGTWQDY---QQTPNLPPLSEEQARKLRLLTLLSLASTIKPLTYEALMTSLS 127
Query: 126 ISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELD---FAIGRDINPGDVTNMITEFQAWS 182
+S +LE L+ AIYS +I G+L + ++ A RD+ P + MI+ AW
Sbjct: 128 LSAPSELESLVTTAIYSSLITGRLSPATNPPTVNVTSVAPLRDVKPSSLPTMISTLTAWE 187
Query: 183 DSCANVLKAIETQIGK--ANSEKHQHLAHSNAIDME 216
C +V+ IET+I K A+S + + H+ A+ +E
Sbjct: 188 ARCGSVISDIETEIAKIRADSAQRRQKEHARAVAIE 223
>sp|Q54KZ8|EIF3M_DICDI Eukaryotic translation initiation factor 3 subunit M
OS=Dictyostelium discoideum GN=eif3m PE=1 SV=1
Length = 401
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 48 LIDMPLIKELD---TSPHAGYYHLLKLFAHGTYQDYLKQKEE-------LKLPEMTQLQK 97
L+D+P ++ L+ S ++ Y L+K+FA +L+ +++ + L LQK
Sbjct: 234 LLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIGLSNDDCLQK 293
Query: 98 KKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLE 157
+L L++ TL+ E +PY + K L I ++E +I A+ D++ KLDQ N +
Sbjct: 294 IRL--LSLATLTSEQSKVPYSLISKMLQIDE-NEVEMWVINAMEGDLLDAKLDQLNRIVN 350
Query: 158 LDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE 193
++ + R N + + F W S N+L+ IE
Sbjct: 351 VNSSTQRVFNKSQWSQLGQRFSVWKSSVKNLLQVIE 386
>sp|Q0UXJ7|EIF3M_PHANO Eukaryotic translation initiation factor 3 subunit M
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=SNOG_03517 PE=3 SV=2
Length = 441
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
++ +K L P F F++L D+ I+ L S ++ LL++F DY K+E
Sbjct: 225 SLRALKSALTHPTHFDFQDLTDLDSIQALRNSDPI-FFQLLEIFNSDLLDDYNDFKDEHD 283
Query: 89 -LPEMTQLQ----KKKLQNLTIVTLSL---ESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
E + L +K++ LT+ +++ +++ +PYDK+ K L IS+ ++E +I+ I
Sbjct: 284 GWVEESGLDGAALNRKMRLLTLASMAASAGQTRSLPYDKIAKALQISS-EEVEMWVIDVI 342
Query: 141 YSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKAN 200
+ ++ GKL Q N + + + R + + W +S VL+ I+ + +
Sbjct: 343 RAGLVEGKLSQLNQTFLIHRSTYRVFGDNQWREVSSRLDMWRNSLTGVLQVIQAEKQRFL 402
Query: 201 SEKHQHLAHSNAIDMEILNIKKSLK-NQTNQSQDTDDMMG 239
EK + +N D + + + + Q Q + DD MG
Sbjct: 403 QEKEE---EANKADNKYDSARGFQRGGQRKQPRALDDDMG 439
>sp|A1DC62|EIF3M_NEOFI Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=NFIA_024940 PE=3 SV=1
Length = 468
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT---YQDYLKQK- 84
AV + L++PG+F F L I+ L +S + + LL++F T Y+D++
Sbjct: 235 AVRALTSALKSPGVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATP 293
Query: 85 -EELK---LPEMTQLQKKKLQNLTIVTL--SLESKCIPYDKLLKELDISNVRDLEDLIIE 138
E + L + + + K++ LT+ +L S S+ +PY + L + V D+E +I+
Sbjct: 294 LETISGGVLADGAEALQTKMRLLTLASLAASTPSRSLPYATIASALRVP-VEDVEKWVID 352
Query: 139 AIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGK 198
I + ++ GKL Q S + A R + W S +VL + T+ +
Sbjct: 353 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLESVLGVLRTERER 412
Query: 199 ANSEKHQHLAH 209
E Q A
Sbjct: 413 YIRESMQAAAE 423
>sp|Q1DQB2|EIF3M_COCIM Eukaryotic translation initiation factor 3 subunit M
OS=Coccidioides immitis (strain RS) GN=CIMG_07501 PE=3
SV=1
Length = 465
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT---YQDYLKQ-- 83
AV + L P +F F L I+ L ++ + LL++FA T Y++++K
Sbjct: 243 AVRALISALTYPFVFDFTPLTSSDAIQNLRSA-EPSLFELLEIFASDTLDAYEEFIKSTP 301
Query: 84 -KEELKLPEMTQLQKKKLQNLTIVTL--SLESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
L E ++ + K++ LT+ +L S S+ +PYD + L I D+E +I+ I
Sbjct: 302 LSSMHNLAESAEILQNKMRVLTLASLAASTPSRSLPYDSISNALRIPR-EDVEKWVIDTI 360
Query: 141 YSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQ 195
+ ++ GKL Q + A R + W S NVL I ++
Sbjct: 361 RAGLVEGKLSQLKGEFLVHRATYRVFGERQWAEVQGRLMVWRRSLENVLGVIHSE 415
>sp|A8WQY8|EIF3M_CAEBR COP9/Signalosome and eIF3 complex-shared subunit 1
OS=Caenorhabditis briggsae GN=cif-1 PE=3 SV=1
Length = 390
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 3 AEKASGVGTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPH 62
A++A+ V T L + T A+E ++ + P F F L + +K L +S
Sbjct: 186 ADQAAKVMTALLGTYTEKDAATARDDAMECVRTAVVDPKSFSFDHLERLSAVKALKSS-D 244
Query: 63 AGYYHLLKLFAHGTYQDYLK--------QKEELKLPEMTQLQKKKLQNLTIVTLSLESKC 114
+ L+LF GT +DY + + LK+ E+ L+K +L LT+++L+ E
Sbjct: 245 PLMFTALELFISGTLKDYQQFVAKNPKFVTDYLKVDEVILLKKIRL--LTLMSLAEEKNE 302
Query: 115 IPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSL 156
I D+L K+LDI LE+ +I+AI + I GK+++ ++L
Sbjct: 303 IKLDELAKQLDIHADETLEEFVIDAIQVNAISGKINEMANTL 344
>sp|Q94261|EIF3M_CAEEL COP9/Signalosome and eIF3 complex-shared subunit 1
OS=Caenorhabditis elegans GN=cif-1 PE=1 SV=1
Length = 390
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 30 VELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLK------- 82
+E ++ + P F F L + +K L TS + L+LF GT +DY +
Sbjct: 213 MECVRTAVVDPKSFSFDHLERLSAVKALKTS-DPLMFTALELFISGTLKDYKEFVAKNPK 271
Query: 83 -QKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E LK+ E L+K +L LT+++L+ E I D+L K+LDI LE+ +I+AI
Sbjct: 272 FVTEHLKVDETILLKKIRL--LTLMSLAEEKNEISLDELAKQLDILADETLEEFVIDAIQ 329
Query: 142 SDIIHGKLDQRNSSL 156
+ I GK+++ +L
Sbjct: 330 VNAISGKINEMARTL 344
>sp|A1CD85|EIF3M_ASPCL Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=ACLA_005680 PE=3 SV=1
Length = 471
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT---YQDYLKQKE 85
AV + L++P +F F L I+ L TS + + LL++F T Y+D++
Sbjct: 235 AVRALASALKSPAVFDFTSLTAADAIQALRTS-DSSLFELLEIFTADTLDAYEDFVAATP 293
Query: 86 ELK-----LPEMTQLQKKKLQNLTIVTL--SLESKCIPYDKLLKELDISNVRDLEDLIIE 138
L + + + KL+ LT+ ++ S S+ +PY + L + D+E +I+
Sbjct: 294 LASISGGVLADAGEALQNKLRLLTLASIAASAPSRSLPYATIASALRVPT-EDVEKWVID 352
Query: 139 AIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQ 195
I + ++ GKL Q S + A R + W S NVL + +
Sbjct: 353 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVVRAE 409
>sp|Q4WG69|EIF3M_ASPFU Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_7G03980 PE=3 SV=1
Length = 468
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT---YQDYLKQK- 84
AV + L++P +F F L I+ L +S + + LL++F T Y+D++
Sbjct: 235 AVRALTSALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATP 293
Query: 85 -EELK---LPEMTQLQKKKLQNLTIVTL--SLESKCIPYDKLLKELDISNVRDLEDLIIE 138
E + L + + + K++ LT+ +L S S+ +PY + L + V D+E +I+
Sbjct: 294 LETISGGVLVDGAEALQTKMRLLTLASLAASTPSRSLPYTTIASALRVP-VEDVEKWVID 352
Query: 139 AIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGK 198
I + ++ GKL Q S + A R + W S +VL + T+ +
Sbjct: 353 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLESVLGVLRTERER 412
Query: 199 ANSEKHQHLAH 209
E Q A
Sbjct: 413 YIRESMQAAAE 423
>sp|B0YCA6|EIF3M_ASPFC Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_089510 PE=3 SV=1
Length = 468
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT---YQDYLKQK- 84
AV + L++P +F F L I+ L +S + + LL++F T Y+D++
Sbjct: 235 AVRALTSALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATP 293
Query: 85 -EELK---LPEMTQLQKKKLQNLTIVTL--SLESKCIPYDKLLKELDISNVRDLEDLIIE 138
E + L + + + K++ LT+ +L S S+ +PY + L + V D+E +I+
Sbjct: 294 LETISGGVLVDGAEALQTKMRLLTLASLAASTPSRSLPYTTIASALRVP-VEDVEKWVID 352
Query: 139 AIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGK 198
I + ++ GKL Q S + A R + W S +VL + T+ +
Sbjct: 353 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLESVLGVLRTERER 412
Query: 199 ANSEKHQHLAH 209
E Q A
Sbjct: 413 YIRESMQAAAE 423
>sp|Q0CPV5|EIF3M_ASPTN Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_04279
PE=3 SV=1
Length = 461
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 12/177 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT---YQDYLKQKE 85
AV + L P +F F L ++ L TS + + LL++F T Y+ ++
Sbjct: 234 AVRALTSALSHPAVFDFTPLTASDAVQALRTS-DSTLFELLEIFTADTLDAYEAFVAATP 292
Query: 86 ELKL------PEMTQLQKK-KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIE 138
+ P LQ K +L L + S S+ +PY + L + D+E +I+
Sbjct: 293 LASISGGVLAPAADALQNKMRLLTLASLAASTPSRSLPYATIASALRVP-AEDVEKWVID 351
Query: 139 AIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQ 195
I + ++ GKL Q S + A R + W S NVL + ++
Sbjct: 352 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVVRSE 408
>sp|A7SPX9|EIF3M_NEMVE Eukaryotic translation initiation factor 3 subunit M
OS=Nematostella vectensis GN=v1g192238 PE=3 SV=1
Length = 379
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 3 AEKASGVGTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPH 62
+E+AS V L + + A + L P + + ++ + + L P
Sbjct: 180 SEEASKVMIELLSTYTDENASAAREDAKSCVVSCLTKPNVLIMDNILSLKPVAVLQGDP- 238
Query: 63 AGYYHLLKLFAHGTYQDYLKQKEE-------LKLPEMTQLQKKKLQNLTIVTLSLESKCI 115
Y LL++F G QDY K + + L ++ KK++ LT++++ E+ I
Sbjct: 239 --IYQLLQIFVSGDVQDYKKFYDSNTDFINSIGLSH--EMNLKKMRVLTLMSIGKETDEI 294
Query: 116 PYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMI 175
Y+ L +L IS+ ++E +IEAI + ++ +LDQ + + + R N+
Sbjct: 295 SYEDLATKLGISS-DEIEQFLIEAIQTGLVKARLDQVHRKVIISSVAQRTFGINQWQNLH 353
Query: 176 TEFQAWSDSCANVLKAIETQI 196
+ W D+ +V +++ +
Sbjct: 354 SRLVKWRDNLLSVRGGLQSVV 374
>sp|Q09722|EIF3M_SCHPO Eukaryotic translation initiation factor 3 subunit M
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=eif3m PE=1 SV=2
Length = 402
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 23 TTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLK 82
+T A EL+++ + +P F F +++ +P +++L+ S LL + + G DY+
Sbjct: 205 STADEAVRELVQRAVNSPKYFFFDDIVTLPPVQQLEQST----LQLLGILSGGMTDDYVS 260
Query: 83 QKEELKLPEMTQLQK-------KKLQNLTIVTLSLES--KCIPYDKLLKELDISNVRDLE 133
E Q QK +K++ LTI +L+ ++ + Y + K L I ++E
Sbjct: 261 WVAENH--AHCQHQKFDEDAIARKMKLLTIASLATQAPNNTLSYGDVAKSLKIDE-NEVE 317
Query: 134 DLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE 193
II+ I + ++ G++ Q +L + + R + + + W S +L+ +E
Sbjct: 318 LWIIDVIRAGLVEGRMSQLTKTLSIHRSSYRVFGKHEWVALHEKLAKWGSSLRYMLQVME 377
>sp|B3MCZ5|EIF3M_DROAN Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
ananassae GN=Tango7 PE=3 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ S + +D L KEL I+ ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFDTLTKELQITE-DEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKANS 201
+ ++ +LDQ N + + + R + QAW ++ ++V + + T + A
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVREGL-TNVSAAQL 377
Query: 202 E--KHQHLAH 209
+ ++Q L H
Sbjct: 378 DLARNQKLVH 387
>sp|Q2UDZ9|EIF3M_ASPOR Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090026000816
PE=3 SV=1
Length = 466
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 12/177 (6%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDY-------- 80
A+ + L P +F F L ++ L +S + + LL++F T Y
Sbjct: 236 AIRALTSALTHPAVFDFTPLTASDAVQALRSS-DSTLFELLEIFTADTLDAYEAFVTATP 294
Query: 81 LKQKEELKLPEMTQLQKKKLQNLTIVTL--SLESKCIPYDKLLKELDISNVRDLEDLIIE 138
L L + + + K++ LT+ +L S S+ +PY + L + D+E +I+
Sbjct: 295 LAGISGGVLADAGEALQNKMRLLTLASLAASTPSRSLPYATIAASLRVP-AEDVEKWVID 353
Query: 139 AIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQ 195
I + ++ GKL Q S + A R + W S NVL + T+
Sbjct: 354 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVLRTE 410
>sp|A4RK68|EIF3M_MAGO7 Eukaryotic translation initiation factor 3 subunit M OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=MGG_01595 PE=3 SV=1
Length = 432
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A+ ++ + +P F+++ +P + L S H +Y LL++F DY +EE +
Sbjct: 216 ALRALRSAISSPTRLSFEDIRALPAVHALSES-HPVHYQLLQIFGEQDLDDYDDFREEHE 274
Query: 89 -LPEMTQLQK----KKLQNLTIVTL---SLESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
E L +K++ LT +L S++++ I Y+ + K L I + D+E I+ I
Sbjct: 275 GFIEKENLDNEVLYRKMRLLTFASLAAASMQTREISYNSITKALQIPS-EDVEMWAIDVI 333
Query: 141 YSDIIHGKLDQR 152
+ ++ GKL Q+
Sbjct: 334 RAGLVEGKLSQK 345
>sp|Q7L2H7|EIF3M_HUMAN Eukaryotic translation initiation factor 3 subunit M OS=Homo
sapiens GN=EIF3M PE=1 SV=1
Length = 374
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A I + L+ P F+F L+ + +K L+ + LL +F Y+K + K
Sbjct: 204 AHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNK 260
Query: 89 -----LPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSD 143
L + + K++ LT + +++E+K I +D + +EL I D+E +I+A+ +
Sbjct: 261 DFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVEAFVIDAVRTK 319
Query: 144 IIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAW 181
+++ K+DQ + + + R + AW
Sbjct: 320 MVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAW 357
>sp|Q5R8C4|EIF3M_PONAB Eukaryotic translation initiation factor 3 subunit M OS=Pongo
abelii GN=EIF3M PE=2 SV=1
Length = 374
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A I + L+ P F+F L+ + +K L+ + LL +F Y+K + K
Sbjct: 204 AHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNK 260
Query: 89 -----LPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSD 143
L + + K++ LT + +++E+K I +D + +EL I D+E +I+A+ +
Sbjct: 261 DFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVEAFVIDAVRTK 319
Query: 144 IIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAW 181
+++ K+DQ + + + R + AW
Sbjct: 320 MVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAW 357
>sp|Q99JX4|EIF3M_MOUSE Eukaryotic translation initiation factor 3 subunit M OS=Mus
musculus GN=Eif3m PE=2 SV=1
Length = 374
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A I + L+ P F+F L+ + +K L+ + LL +F Y+K + K
Sbjct: 204 AHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNK 260
Query: 89 -----LPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSD 143
L + + K++ LT + +++E+K I +D + +EL I D+E +I+A+ +
Sbjct: 261 DFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVEAFVIDAVRTK 319
Query: 144 IIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAW 181
+++ K+DQ + + + R + AW
Sbjct: 320 MVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAW 357
>sp|B4KT65|EIF3M_DROMO Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
mojavensis GN=Tango7 PE=3 SV=1
Length = 387
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ + +D L KEL I N ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESYPEMTFDTLTKELQI-NEDEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI----ETQIG 197
+ ++ +LDQ N + + + R + QAW ++ ++V + + Q+
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVREGLTNVSSAQLD 378
Query: 198 KANSEKHQH 206
A S+K H
Sbjct: 379 LARSQKLIH 387
>sp|Q9UUJ7|CSN7_SCHPO COP9 signalosome complex subunit 7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn71 PE=1 SV=1
Length = 205
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 31 ELIKQVLEAPGIFMFKEL-IDMPLIKELDTSP-HAGYYHLLKLFAHGTYQDYLKQKEELK 88
E I Q ++ P +F F+EL I+ +++ + P + L++F G +D + EL+
Sbjct: 3 EKISQAIDDPNVFCFQELWIECQEVQK--SQPIDSAVLRTLEIFCRGDIRDASSEWNELR 60
Query: 89 LPEMTQLQKKKLQNLTIVTLSLE--SKCIPYDKLLKELDISNVRD------LEDLIIEAI 140
KKL+ LT++ L+ + ++ +L L + + +E I++A+
Sbjct: 61 F--------KKLRLLTLIDLANRHVGSSVSFETILVHLQLDRLPPSDPTFTVEYYIMQAM 112
Query: 141 YSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE--TQIGK 198
+ I+ GK++ + +L + +A+ R ++ + M + + C+N+L ++ T
Sbjct: 113 MNQILVGKINAKTQTLHVSWALERFLDSKRIDEMKYSLDRFIERCSNILFQLDAGTPSVS 172
Query: 199 ANSEKHQHLAHSNAIDMEILN 219
+ ++ ++ S+ ID + +
Sbjct: 173 KSFKRASRMSSSDGIDYMVFD 193
>sp|B4MY75|EIF3M_DROWI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
willistoni GN=Tango7 PE=3 SV=1
Length = 387
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ EE K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSEKLPAYVEFYEEHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ + + ++ L KEL I+ ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESNAEMSFEALTKELQITE-NEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI----ETQIG 197
+ ++ +LDQ N + + + R + QAW ++ ++V + + Q+
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVREGLTNVASAQLD 378
Query: 198 KANSEKHQH 206
A S+K H
Sbjct: 379 LARSQKLIH 387
>sp|B4QFD2|EIF3M_DROSI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
simulans GN=Tango7 PE=3 SV=1
Length = 387
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ +
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSEKLPAYVQFYEDHR 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ S + ++ L KEL I N ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQI-NEDEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET----QIG 197
+ ++ +LDQ N + + + R + QAW ++ + V + + + Q+
Sbjct: 319 TKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQLD 378
Query: 198 KANSEKHQH 206
A S+K H
Sbjct: 379 LARSQKLIH 387
>sp|B4HR14|EIF3M_DROSE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
sechellia GN=Tango7 PE=3 SV=1
Length = 387
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ +
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSEKLPAYVQFYEDHR 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ S + ++ L KEL I N ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQI-NEDEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET----QIG 197
+ ++ +LDQ N + + + R + QAW ++ + V + + + Q+
Sbjct: 319 TKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQLD 378
Query: 198 KANSEKHQH 206
A S+K H
Sbjct: 379 LARSQKLIH 387
>sp|Q7JVI3|EIF3M_DROME Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
melanogaster GN=Tango7 PE=2 SV=1
Length = 387
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ +
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSEKLPAYVQFYEDHR 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ S + ++ L KEL I N ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQI-NEDEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET----QIG 197
+ ++ +LDQ N + + + R + QAW ++ + V + + + Q+
Sbjct: 319 TKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQLD 378
Query: 198 KANSEKHQH 206
A S+K H
Sbjct: 379 LARSQKLIH 387
>sp|B4JW83|EIF3M_DROGR Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
grimshawi GN=Tango7 PE=3 SV=1
Length = 387
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ + +D L KEL I N ++E +IE +
Sbjct: 262 --EFVNSQGLNHDQNMKKMRLLTFMQLAESYPEMSFDTLTKELQI-NDDEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI----ETQIG 197
+ ++ +LDQ N + + + R + QAW ++ ++V + + Q+
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVREGLTNVSSAQLD 378
Query: 198 KANSEKHQH 206
A ++K H
Sbjct: 379 LARTQKLIH 387
>sp|B4P6M6|EIF3M_DROYA Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
yakuba GN=Tango7 PE=2 SV=1
Length = 387
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ +
Sbjct: 205 AMKCIVTALADPNTFLLDPLLALKPVRFLEGD---LIHDLLSIFVSEKLPAYVQFYEDHR 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ S + ++ L KEL I N ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQI-NEDEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET----QIG 197
+ ++ +LDQ N + + + R + QAW ++ + V + + + Q+
Sbjct: 319 TKLVRARLDQANHKVHITSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQVD 378
Query: 198 KANSEKHQH 206
A S+K H
Sbjct: 379 LARSQKLIH 387
>sp|B3NRC6|EIF3M_DROER Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
erecta GN=Tango7 PE=3 SV=1
Length = 387
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 98 KKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLE 157
KK++ LT + L+ S + ++ L KEL I N ++E +IE + + ++ +LDQ N +
Sbjct: 276 KKMRLLTFMQLAESSPEMTFETLTKELQI-NEDEVEPFVIEVLKTKLVRARLDQANHKVH 334
Query: 158 LDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET----QIGKANSEKHQH 206
+ + R + QAW ++ + V + + + Q+ A S+K H
Sbjct: 335 ITSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQLDLARSQKLIH 387
>sp|Q292F0|EIF3M_DROPS Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
pseudoobscura pseudoobscura GN=Tango7 PE=3 SV=1
Length = 387
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLALKPVRFLEGD---LIHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ + + +D L KEL I+ ++E +I+ +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESNPEMTFDTLTKELQITE-DEVEPFVIQVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKANS 201
+ ++ +LDQ N + + + R + QAW ++ ++V + T + A
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVRDGL-TNVSSAQL 377
Query: 202 E--KHQHLAH 209
E + Q L H
Sbjct: 378 ELARTQKLIH 387
>sp|B4LJT9|EIF3M_DROVI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
virilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGD---LIHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ + +D L KEL I ++E +IE +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESYPEMTFDTLTKELQIGE-DEVEPFVIEVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI----ETQIG 197
+ ++ +LDQ N + + + R + QAW ++ ++V + + Q+
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVREGLTNVSSAQLD 378
Query: 198 KANSEKHQH 206
A ++K H
Sbjct: 379 LARTQKLIH 387
>sp|Q3T148|EIF3M_BOVIN Eukaryotic translation initiation factor 3 subunit M OS=Bos taurus
GN=EIF3M PE=2 SV=2
Length = 373
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHG--TYQDYLKQKEE 86
A I + L+ P F+F L+ + +K L+ + LL +F Y + + ++
Sbjct: 204 AHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLAYVKFYQNNKD 260
Query: 87 L--KLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDI 144
L + + K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +
Sbjct: 261 FIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVEAFVIDAVRTKM 319
Query: 145 IHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAW 181
++ K+DQ + + + R + AW
Sbjct: 320 VYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAW 356
>sp|Q7T3B0|EIF3M_DANRE Eukaryotic translation initiation factor 3 subunit M OS=Danio rerio
GN=eif3m PE=2 SV=2
Length = 375
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQK---- 84
A I + L+ P ++F L+ + ++ L+ + LL +F Y+K
Sbjct: 204 AHRCIVRALKDPNTYLFDHLLALKPVRFLEGEL---IHDLLTIFVSAKLISYVKFYQSNK 260
Query: 85 ---EELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E L L + K +L LT + +++E K I ++ + +EL I D+E +I+A+
Sbjct: 261 DFIESLGLSHEQNMSKMRL--LTFMGMAVEMKEISFETMQQELQI-GAEDVEAFVIDAVR 317
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET 194
+ +++ K+DQ + + + R + +W + + V +++T
Sbjct: 318 TKMVYSKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLCSWKQNLSTVKSSLQT 370
>sp|Q54NQ0|PSD13_DICDI 26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium
discoideum GN=psmD13 PE=2 SV=1
Length = 385
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 20 LAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQD 79
+++ + + A L L ++ F +LI P++K L+ S H LK F G Q
Sbjct: 193 ISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQQ 252
Query: 80 Y---LKQKEEL-----KLPEMTQLQKKKLQNLTIVTLSLES----KCIPYDKLLKELDIS 127
+ + Q ++ + Q ++K+ L+++ L+ + + I + K+ + +
Sbjct: 253 FEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKLP 312
Query: 128 NVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCAN 187
+ ++E L+++++ ++I G +DQ + + + R ++ + +M W++
Sbjct: 313 -LGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQINSMNNRIAEWTEKAKT 371
Query: 188 VLKAIE 193
L+ +E
Sbjct: 372 SLRLVE 377
>sp|Q5ZJ64|EIF3M_CHICK Eukaryotic translation initiation factor 3 subunit M OS=Gallus
gallus GN=EIF3M PE=2 SV=1
Length = 374
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A I + L+ P F+F L+ + +K L+ + LL +F Y+K + K
Sbjct: 204 AHRCIVRALKDPNTFLFDHLLALKPVKFLEGEL---IHDLLTIFVSAKLVSYVKFYQNNK 260
Query: 89 -----LPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSD 143
L + + K++ LT + +++E+K I +D + +EL I D+E +I+A+ +
Sbjct: 261 DFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVEAFVIDAVKTK 319
Query: 144 IIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAW 181
+++ K+DQ + + + R + W
Sbjct: 320 MVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTW 357
>sp|B4GDM5|EIF3M_DROPE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
persimilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A++ I L P F+ L+ + ++ L+ + LL +F Y++ E+ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLALKPVRFLEGD---LIHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 89 LPEMTQLQ-------KKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
E Q KK++ LT + L+ + + +D L KEL I+ ++E +I+ +
Sbjct: 262 --EFVNSQGLNHEQNMKKMRLLTFMQLAESNPEMTFDTLTKELQITE-DEVEPFVIQVLK 318
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANV 188
+ ++ +LDQ N + + + R + QAW ++ ++V
Sbjct: 319 TKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSV 365
>sp|Q04062|RPN9_YEAST 26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN9 PE=1 SV=1
Length = 393
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKEL-DTSPHAGYYHLLKLFAHGTYQ--DYLKQKE 85
A +L L I+ F EL+ P+++ + + S + + LL G + D L + +
Sbjct: 214 AYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFDKFDSLIKVQ 273
Query: 86 ELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDL-----EDLIIEAI 140
K+P + Q + Q + ++TL +E+ + ++L DIS L E L++ AI
Sbjct: 274 ISKIPILAQHESFLRQKICLMTL-IETVFVKNIRMLSFEDISKATHLPKDNVEHLVMRAI 332
Query: 141 YSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQ 195
++ G +DQ N + + + R I+ +T M W+D + K +E +
Sbjct: 333 SLGLLKGSIDQVNELVTISWVQPRIISGDQITKMKDRLVEWNDQVEKLGKKMEAR 387
>sp|P61203|CSN2_RAT COP9 signalosome complex subunit 2 OS=Rattus norvegicus GN=Cops2
PE=2 SV=1
Length = 443
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 115 IPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELD 159
IP+ + KEL+I +V D+E L+++ I + IHG++DQ N LELD
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>sp|P61202|CSN2_MOUSE COP9 signalosome complex subunit 2 OS=Mus musculus GN=Cops2 PE=1
SV=1
Length = 443
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 115 IPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELD 159
IP+ + KEL+I +V D+E L+++ I + IHG++DQ N LELD
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>sp|P61201|CSN2_HUMAN COP9 signalosome complex subunit 2 OS=Homo sapiens GN=COPS2 PE=1
SV=1
Length = 443
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 115 IPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELD 159
IP+ + KEL+I +V D+E L+++ I + IHG++DQ N LELD
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>sp|Q6IR75|CSN2_XENLA COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis
GN=csn2 PE=2 SV=1
Length = 441
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 115 IPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELD 159
IP+ + KEL+I +V D+E L+++ I + IHG++DQ N LELD
Sbjct: 369 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,729,899
Number of Sequences: 539616
Number of extensions: 3827131
Number of successful extensions: 10049
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 9973
Number of HSP's gapped (non-prelim): 137
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)