Your job contains 1 sequence.
>psy10889
MVAEKASGVGTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTS
PHAGYYHLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKL
LKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQA
WSDSCANVLKAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQSQDTDDMMGS
DNVVDKIGKKYKIKSNRGTSNTKFWQK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10889
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C3R1 - symbol:COPS7B "Uncharacterized protein... 584 9.6e-57 1
UNIPROTKB|Q2KI56 - symbol:COPS7B "COP9 signalosome comple... 571 2.3e-55 1
UNIPROTKB|E2R501 - symbol:COPS7B "Uncharacterized protein... 571 2.3e-55 1
UNIPROTKB|Q9H9Q2 - symbol:COPS7B "COP9 signalosome comple... 570 2.9e-55 1
RGD|1306918 - symbol:Cops7b "COP9 signalosome subunit 7B"... 569 3.7e-55 1
MGI|MGI:1349388 - symbol:Cops7b "COP9 (constitutive photo... 568 4.8e-55 1
UNIPROTKB|F1NGK0 - symbol:COPS7A "Uncharacterized protein... 555 1.1e-53 1
UNIPROTKB|E2RED3 - symbol:COPS7A "Uncharacterized protein... 541 3.5e-52 1
UNIPROTKB|Q9UBW8 - symbol:COPS7A "COP9 signalosome comple... 541 3.5e-52 1
MGI|MGI:1349400 - symbol:Cops7a "COP9 (constitutive photo... 539 5.6e-52 1
UNIPROTKB|F1MAA2 - symbol:Cops7a "Protein Cops7a" species... 539 5.6e-52 1
UNIPROTKB|F6QE33 - symbol:COPS7A "Uncharacterized protein... 536 1.2e-51 1
FB|FBgn0028836 - symbol:CSN7 "COP9 complex homolog subuni... 533 2.4e-51 1
UNIPROTKB|F5GYF7 - symbol:COPS7A "COP9 signalosome comple... 515 2.0e-49 1
UNIPROTKB|F5H248 - symbol:COPS7A "COP9 signalosome comple... 512 4.1e-49 1
UNIPROTKB|F5H7C6 - symbol:COPS7A "COP9 signalosome comple... 480 1.0e-45 1
UNIPROTKB|F1SMV1 - symbol:COPS7B "Uncharacterized protein... 478 1.6e-45 1
DICTYBASE|DDB_G0271282 - symbol:csn7 "proteasome componen... 447 3.2e-42 1
RGD|1310070 - symbol:Cops7a "COP9 signalosome subunit 7A"... 414 9.9e-39 1
TAIR|locus:2205593 - symbol:FUS5 "FUSCA 5" species:3702 "... 373 2.2e-34 1
UNIPROTKB|F5H4U8 - symbol:COPS7A "COP9 signalosome comple... 302 7.3e-27 1
ASPGD|ASPL0000016167 - symbol:acoB species:162425 "Emeric... 261 1.6e-22 1
TAIR|locus:2076517 - symbol:AT3G02200 "AT3G02200" species... 154 1.3e-08 1
TAIR|locus:504955552 - symbol:AT4G19006 "AT4G19006" speci... 150 1.8e-08 2
DICTYBASE|DDB_G0287005 - symbol:DDB_G0287005 "proteasome ... 150 3.5e-08 1
TAIR|locus:2171998 - symbol:AT5G45620 "AT5G45620" species... 145 1.0e-07 2
WB|WBGene00019543 - symbol:cif-1 species:6239 "Caenorhabd... 141 3.8e-07 1
UNIPROTKB|Q94261 - symbol:cif-1 "COP9/Signalosome and eIF... 141 3.8e-07 1
FB|FBgn0028691 - symbol:Rpn9 "Regulatory particle non-ATP... 125 2.6e-05 1
TAIR|locus:2180917 - symbol:AT5G15610 "AT5G15610" species... 115 3.0e-05 2
POMBASE|SPAC1952.12c - symbol:csn71 "COP9/signalosome com... 118 3.3e-05 1
FB|FBgn0033902 - symbol:Tango7 "Transport and Golgi organ... 123 4.5e-05 1
UNIPROTKB|Q292F0 - symbol:Tango7 "Eukaryotic translation ... 121 7.5e-05 1
POMBASE|SPAC1751.03 - symbol:SPAC1751.03 "translation ini... 121 8.1e-05 1
UNIPROTKB|A4RK68 - symbol:MGG_01595 "Eukaryotic translati... 121 9.1e-05 1
SGD|S000002835 - symbol:RPN9 "Non-ATPase regulatory subun... 118 0.00017 1
UNIPROTKB|E2QWG8 - symbol:EIF3M "Uncharacterized protein"... 117 0.00021 1
UNIPROTKB|Q7L2H7 - symbol:EIF3M "Eukaryotic translation i... 117 0.00021 1
UNIPROTKB|F1SGR0 - symbol:EIF3M "Uncharacterized protein"... 117 0.00021 1
MGI|MGI:1351744 - symbol:Eif3m "eukaryotic translation in... 117 0.00021 1
UNIPROTKB|F1N5F7 - symbol:EIF3M "Eukaryotic translation i... 116 0.00027 1
DICTYBASE|DDB_G0285105 - symbol:psmD13 "26S proteasome no... 113 0.00061 1
UNIPROTKB|Q3T148 - symbol:EIF3M "Eukaryotic translation i... 112 0.00076 1
ZFIN|ZDB-GENE-040426-2643 - symbol:eif3m "eukaryotic tran... 112 0.00077 1
UNIPROTKB|Q5ZJ64 - symbol:EIF3M "Eukaryotic translation i... 111 0.00099 1
UNIPROTKB|F1NZE2 - symbol:EIF3M "Eukaryotic translation i... 111 0.00099 1
>UNIPROTKB|E1C3R1 [details] [associations]
symbol:COPS7B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388
GeneTree:ENSGT00390000013069 OMA:NTLQEWC EMBL:AADN02020653
IPI:IPI00587621 Ensembl:ENSGALT00000012571 Uniprot:E1C3R1
Length = 267
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 116/229 (50%), Positives = 157/229 (68%)
Query: 12 NPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKL 71
N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y+ LL L
Sbjct: 10 NLLEQFILLAKGTSGSALTALINQVLEAPGVYVFGELLELTNVQELAEGSNAAYFQLLNL 69
Query: 72 FAHGTYQDYLK-QKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
FA+GTY DY+ + LPE+T QK KL++LTIV+L+ KCIPY LLK+LD+ N+R
Sbjct: 70 FAYGTYPDYVALTANKDNLPELTATQKNKLKHLTIVSLASRMKCIPYSVLLKDLDMRNLR 129
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D++N++ Q W D C VL
Sbjct: 130 ELEDLIIEAVYTDIIQGKLDQRNQMLEVDFCIGRDIQKKDISNIVKTLQEWCDGCEAVLL 189
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMM 238
IE Q+ +AN K H ++ME+ NIKK+LK + S Q+ + +
Sbjct: 190 GIEQQVLRANQYKENHHRTQQQVEMEVTNIKKTLKATASSSAQEMEQQL 238
>UNIPROTKB|Q2KI56 [details] [associations]
symbol:COPS7B "COP9 signalosome complex subunit 7b"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0008180 GO:GO:0010388
eggNOG:NOG289374 HOGENOM:HOG000006003 HOVERGEN:HBG051138 KO:K12180
GeneTree:ENSGT00390000013069 EMBL:BC112763 IPI:IPI00714582
RefSeq:NP_001040077.1 UniGene:Bt.26541 STRING:Q2KI56 PRIDE:Q2KI56
Ensembl:ENSBTAT00000006858 GeneID:617995 KEGG:bta:617995 CTD:64708
InParanoid:Q2KI56 OMA:NTLQEWC OrthoDB:EOG4M65JC NextBio:20900938
Uniprot:Q2KI56
Length = 264
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 113/229 (49%), Positives = 155/229 (67%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE L PE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 69 LFAYGTYPDYIANKESL--PELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLL 186
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMM 238
IE Q+ +AN K H ++ E+ NIKK+LK + S Q+ + +
Sbjct: 187 GIEQQVLRANQYKENHSRTQQQVEAEVTNIKKTLKATASSSAQEMEQQL 235
>UNIPROTKB|E2R501 [details] [associations]
symbol:COPS7B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 KO:K12180
GeneTree:ENSGT00390000013069 CTD:64708 OMA:NTLQEWC
EMBL:AAEX03014439 RefSeq:XP_852665.1 PRIDE:E2R501
Ensembl:ENSCAFT00000017690 GeneID:610156 KEGG:cfa:610156
NextBio:20895723 Uniprot:E2R501
Length = 264
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 113/229 (49%), Positives = 155/229 (67%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE L PE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 69 LFAYGTYPDYIANKESL--PELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLL 186
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMM 238
IE Q+ +AN K H ++ E+ NIKK+LK + S Q+ + +
Sbjct: 187 GIEQQVLRANQYKENHSRTQQQVEAEVTNIKKTLKATASSSAQEMEQQL 235
>UNIPROTKB|Q9H9Q2 [details] [associations]
symbol:COPS7B "COP9 signalosome complex subunit 7b"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 EMBL:CH471063 GO:GO:0008180
GO:GO:0010388 eggNOG:NOG289374 HOGENOM:HOG000006003
HOVERGEN:HBG051138 KO:K12180 CTD:64708 OrthoDB:EOG4M65JC
EMBL:AK022674 EMBL:AK024273 EMBL:AC073476 EMBL:BC010739
EMBL:BC091493 IPI:IPI00009301 IPI:IPI00445209 IPI:IPI00478990
RefSeq:NP_073567.1 UniGene:Hs.335061 ProteinModelPortal:Q9H9Q2
SMR:Q9H9Q2 DIP:DIP-53525N IntAct:Q9H9Q2 STRING:Q9H9Q2
PhosphoSite:Q9H9Q2 DMDM:55976598 PaxDb:Q9H9Q2 PRIDE:Q9H9Q2
DNASU:64708 Ensembl:ENST00000350033 Ensembl:ENST00000373608
Ensembl:ENST00000409091 Ensembl:ENST00000410024 GeneID:64708
KEGG:hsa:64708 UCSC:uc002vsg.1 UCSC:uc002vsh.1
GeneCards:GC02P232646 HGNC:HGNC:16760 HPA:HPA034675
neXtProt:NX_Q9H9Q2 PharmGKB:PA26759 PhylomeDB:Q9H9Q2
ChEMBL:CHEMBL5706 ChiTaRS:COPS7B GenomeRNAi:64708 NextBio:66639
ArrayExpress:Q9H9Q2 Bgee:Q9H9Q2 CleanEx:HS_COPS7B
Genevestigator:Q9H9Q2 GermOnline:ENSG00000144524 Uniprot:Q9H9Q2
Length = 264
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 113/229 (49%), Positives = 155/229 (67%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE L PE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 69 LFAYGTYPDYIANKESL--PELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLL 186
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMM 238
IE Q+ +AN K H ++ E+ NIKK+LK + S Q+ + +
Sbjct: 187 GIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQL 235
>RGD|1306918 [details] [associations]
symbol:Cops7b "COP9 signalosome subunit 7B" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008180 "signalosome" evidence=ISO] [GO:0010388 "cullin
deneddylation" evidence=ISO] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 RGD:1306918 KO:K12180 GeneTree:ENSGT00390000013069
CTD:64708 OrthoDB:EOG4M65JC EMBL:CH474004 IPI:IPI00194396
RefSeq:NP_001102277.1 UniGene:Rn.33834 Ensembl:ENSRNOT00000025411
GeneID:363273 KEGG:rno:363273 UCSC:RGD:1306918 NextBio:683080
Uniprot:D3ZU52
Length = 322
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 113/229 (49%), Positives = 155/229 (67%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 67 SNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 126
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE L PE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 127 LFAYGTYPDYIANKESL--PELSAAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 184
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 185 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIQKKDINNIVKTLHEWCDGCEAVLL 244
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMM 238
IE Q+ +AN K H ++ E+ NIKK+LK + S Q+ + +
Sbjct: 245 GIEQQVLRANQYKENHHRTQQQVEAEVSNIKKTLKATASSSAQEMEQQL 293
>MGI|MGI:1349388 [details] [associations]
symbol:Cops7b "COP9 (constitutive photomorphogenic) homolog,
subunit 7b (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349388 GO:GO:0005737 GO:GO:0008180 GO:GO:0010388
eggNOG:NOG289374 HOGENOM:HOG000006003 HOVERGEN:HBG051138 KO:K12180
GeneTree:ENSGT00390000013069 CTD:64708 OMA:NTLQEWC
OrthoDB:EOG4M65JC ChiTaRS:COPS7B EMBL:AF071317 EMBL:AK081309
EMBL:AK168740 EMBL:BC012659 IPI:IPI00453769 RefSeq:NP_766562.1
UniGene:Mm.12973 ProteinModelPortal:Q8BV13 SMR:Q8BV13 STRING:Q8BV13
PhosphoSite:Q8BV13 PaxDb:Q8BV13 PRIDE:Q8BV13 DNASU:26895
Ensembl:ENSMUST00000027446 Ensembl:ENSMUST00000121534 GeneID:26895
KEGG:mmu:26895 UCSC:uc007bvr.1 InParanoid:Q8BV13 NextBio:304731
Bgee:Q8BV13 Genevestigator:Q8BV13 GermOnline:ENSMUSG00000026240
Uniprot:Q8BV13
Length = 264
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 113/229 (49%), Positives = 155/229 (67%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE L PE++ Q+ KL++LTIV+L+ KCIPY LLK+L++ N+R
Sbjct: 69 LFAYGTYPDYIANKESL--PELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLK 190
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W D C VL
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLL 186
Query: 191 AIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMM 238
IE Q+ +AN K H ++ E+ NIKK+LK + S Q+ + +
Sbjct: 187 GIEQQVLRANQYKENHHRTQQQVEAEVSNIKKTLKATASSSAQEMEQQL 235
>UNIPROTKB|F1NGK0 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 OMA:HNVRQLE
GeneTree:ENSGT00390000013069 EMBL:AADN02061125 IPI:IPI00598529
Ensembl:ENSGALT00000023360 Uniprot:F1NGK0
Length = 275
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 112/229 (48%), Positives = 153/229 (66%)
Query: 1 MVAE-KASGVGTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDT 59
M AE K +G EQF+LLAK +GAA LI QVLEAPGI++F EL+DMP ++EL
Sbjct: 1 MAAEGKVTGQSQ---EQFLLLAKAARGAALASLIHQVLEAPGIYVFGELLDMPAVRELAD 57
Query: 60 SPHAGYYHLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDK 119
S + +HLL +FA GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY
Sbjct: 58 SEFSPVFHLLTIFACGTYADYLA--EAANLPPLTEAQKNKLRHLSVVTLAAKIKCIPYSV 115
Query: 120 LLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQ 179
LL++L + NVR LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI +++ + Q
Sbjct: 116 LLEQLQLKNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIRREELSTITRTLQ 175
Query: 180 AWSDSCANVLKAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
W C VL IE Q+ +AN K Q LA I+ E+ N+KK++K T
Sbjct: 176 EWCQGCEVVLSGIEEQVSRANQHKEQQLALKQQIESEVANLKKTIKVTT 224
>UNIPROTKB|E2RED3 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813 KO:K12180
OMA:HNVRQLE GeneTree:ENSGT00390000013069 EMBL:AAEX03015279
RefSeq:XP_003639987.1 RefSeq:XP_543849.2 Ensembl:ENSCAFT00000023365
GeneID:486722 KEGG:cfa:486722 NextBio:20860455 Uniprot:E2RED3
Length = 275
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 109/219 (49%), Positives = 148/219 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAITRTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
IE Q+ +AN K Q L I+ E+ N+KK++K T
Sbjct: 186 SGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTT 224
>UNIPROTKB|Q9UBW8 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 EMBL:CH471116
GO:GO:0008180 GO:GO:0010388 EMBL:AF210052 EMBL:AB014764
EMBL:AB033603 EMBL:AF193844 EMBL:AK001318 EMBL:AK021721
EMBL:AK022488 EMBL:AK292621 EMBL:BC011789 IPI:IPI00301419
RefSeq:NP_001157565.1 RefSeq:NP_001157566.1 RefSeq:NP_001157567.1
RefSeq:NP_057403.1 UniGene:Hs.530823 ProteinModelPortal:Q9UBW8
SMR:Q9UBW8 DIP:DIP-53412N IntAct:Q9UBW8 MINT:MINT-1393951
STRING:Q9UBW8 PhosphoSite:Q9UBW8 DMDM:55976618 PaxDb:Q9UBW8
PeptideAtlas:Q9UBW8 PRIDE:Q9UBW8 DNASU:50813
Ensembl:ENST00000229251 Ensembl:ENST00000442593
Ensembl:ENST00000534877 Ensembl:ENST00000534947
Ensembl:ENST00000539735 Ensembl:ENST00000543155 GeneID:50813
KEGG:hsa:50813 UCSC:uc001qqh.3 CTD:50813 GeneCards:GC12P006833
HGNC:HGNC:16758 HPA:HPA026915 neXtProt:NX_Q9UBW8 PharmGKB:PA26758
eggNOG:NOG289374 HOGENOM:HOG000006003 HOVERGEN:HBG051138
InParanoid:Q9UBW8 KO:K12180 OMA:HNVRQLE OrthoDB:EOG42Z4R2
PhylomeDB:Q9UBW8 ChiTaRS:COPS7A GenomeRNAi:50813 NextBio:53257
ArrayExpress:Q9UBW8 Bgee:Q9UBW8 CleanEx:HS_COPS7A
Genevestigator:Q9UBW8 GermOnline:ENSG00000111652 Uniprot:Q9UBW8
Length = 275
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 109/219 (49%), Positives = 148/219 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
IE Q+ +AN K Q L I+ E+ N+KK++K T
Sbjct: 186 SGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTT 224
>MGI|MGI:1349400 [details] [associations]
symbol:Cops7a "COP9 (constitutive photomorphogenic) homolog,
subunit 7a (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349400 GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813
eggNOG:NOG289374 HOGENOM:HOG000006003 HOVERGEN:HBG051138 KO:K12180
OMA:HNVRQLE OrthoDB:EOG42Z4R2 EMBL:AF071316 EMBL:AK010726
EMBL:AK013155 EMBL:AK019122 EMBL:BC003724 EMBL:AF240179
IPI:IPI00123465 IPI:IPI00317701 RefSeq:NP_001157561.1
RefSeq:NP_036133.1 UniGene:Mm.244536 ProteinModelPortal:Q9CZ04
SMR:Q9CZ04 STRING:Q9CZ04 PhosphoSite:Q9CZ04 PaxDb:Q9CZ04
PRIDE:Q9CZ04 DNASU:26894 Ensembl:ENSMUST00000032220
Ensembl:ENSMUST00000112439 GeneID:26894 KEGG:mmu:26894
UCSC:uc009dsr.2 UCSC:uc009dss.2 GeneTree:ENSGT00390000013069
NextBio:304727 Bgee:Q9CZ04 Genevestigator:Q9CZ04
GermOnline:ENSMUSG00000030127 Uniprot:Q9CZ04
Length = 275
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 109/219 (49%), Positives = 147/219 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
IE Q+ +AN K Q L I+ E+ N+KK++K T
Sbjct: 186 SGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTT 224
>UNIPROTKB|F1MAA2 [details] [associations]
symbol:Cops7a "Protein Cops7a" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1310070 GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813
KO:K12180 OMA:HNVRQLE GeneTree:ENSGT00390000013069 IPI:IPI00365695
RefSeq:NP_001040563.2 UniGene:Rn.154627 PRIDE:F1MAA2
Ensembl:ENSRNOT00000022874 GeneID:312710 KEGG:rno:312710
NextBio:665200 Uniprot:F1MAA2
Length = 277
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 109/219 (49%), Positives = 148/219 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELADSDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
IE Q+ +AN K Q L I+ E+ N+KK++K T
Sbjct: 186 SGIEEQVSRANLHKEQQLGLKQQIESEVANLKKTIKVTT 224
>UNIPROTKB|F6QE33 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813 KO:K12180
OMA:HNVRQLE GeneTree:ENSGT00390000013069 EMBL:DAAA02014461
IPI:IPI00907970 RefSeq:NP_001098801.2 RefSeq:NP_001157560.1
UniGene:Bt.42676 Ensembl:ENSBTAT00000014754 GeneID:505079
KEGG:bta:505079 NextBio:20866973 Uniprot:F6QE33
Length = 275
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 108/219 (49%), Positives = 148/219 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQR+ LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRHQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
IE Q+ +AN K Q L I+ E+ N+KK++K T
Sbjct: 186 SGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTT 224
>FB|FBgn0028836 [details] [associations]
symbol:CSN7 "COP9 complex homolog subunit 7" species:7227
"Drosophila melanogaster" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome" evidence=ISS;IDA;IPI]
[GO:0050821 "protein stabilization" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] [GO:0046331
"lateral inhibition" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:AE013599 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 GO:GO:0048477 GO:GO:0046331
GO:GO:0008180 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG289374
KO:K12180 GeneTree:ENSGT00390000013069 OMA:NTLQEWC EMBL:BT012433
RefSeq:NP_610379.2 UniGene:Dm.7312 ProteinModelPortal:Q9V4S8
SMR:Q9V4S8 IntAct:Q9V4S8 MINT:MINT-884309 STRING:Q9V4S8
PaxDb:Q9V4S8 EnsemblMetazoa:FBtr0088742 GeneID:35816
KEGG:dme:Dmel_CG2038 CTD:35816 FlyBase:FBgn0028836
InParanoid:Q9V4S8 OrthoDB:EOG4GHX50 PhylomeDB:Q9V4S8 ChiTaRS:CSN7
GenomeRNAi:35816 NextBio:795352 Bgee:Q9V4S8 GermOnline:CG2038
Uniprot:Q9V4S8
Length = 278
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 109/228 (47%), Positives = 158/228 (69%)
Query: 14 LEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFA 73
LE+F +LAK++ GAA +++I+Q LEAP +F+F EL+ P + +L P + ++ L LFA
Sbjct: 20 LEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFA 79
Query: 74 HGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLE 133
+GTY++Y Q E K E+T +KKLQ+LTIV+L++++K IPY LL EL+I NVR LE
Sbjct: 80 YGTYKEYRAQPE--KFIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLE 137
Query: 134 DLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE 193
D+IIEAIY+DIIHGKL Q LE+D+A GRDI PG ++ QAW +SC +V IE
Sbjct: 138 DIIIEAIYADIIHGKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIE 197
Query: 194 TQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQSQDTDDMMGSD 241
QI AN+EK + L + ++ +++N+KK LK+QT+ D+D+ M D
Sbjct: 198 MQIKYANAEKSKRLINKERVEQDLINLKKVLKSQTS---DSDESMQID 242
>UNIPROTKB|F5GYF7 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758 ChiTaRS:COPS7A
EMBL:AC125494 IPI:IPI01012686 ProteinModelPortal:F5GYF7 SMR:F5GYF7
Ensembl:ENST00000538753 ArrayExpress:F5GYF7 Bgee:F5GYF7
Uniprot:F5GYF7
Length = 213
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 104/208 (50%), Positives = 140/208 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDMEI 217
IE Q+ +AN K Q L I+ E+
Sbjct: 186 SGIEEQVSRANQHKEQQLGLKQQIESEV 213
>UNIPROTKB|F5H248 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758 ChiTaRS:COPS7A
EMBL:AC125494 IPI:IPI01015612 ProteinModelPortal:F5H248 SMR:F5H248
Ensembl:ENST00000538410 ArrayExpress:F5H248 Bgee:F5H248
Uniprot:F5H248
Length = 262
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 104/207 (50%), Positives = 139/207 (67%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVL 185
Query: 190 KAIETQIGKANSEKHQHLAHSNAIDME 216
IE Q+ +AN K Q L I+ E
Sbjct: 186 SGIEEQVSRANQHKEQQLGLKQQIESE 212
>UNIPROTKB|F5H7C6 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758 ChiTaRS:COPS7A
EMBL:AC125494 IPI:IPI01013606 ProteinModelPortal:F5H7C6 SMR:F5H7C6
Ensembl:ENST00000541866 ArrayExpress:F5H7C6 Bgee:F5H7C6
Uniprot:F5H7C6
Length = 192
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 97/187 (51%), Positives = 130/187 (69%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
Query: 130 RDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVL 189
R LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D++ + Q W C VL
Sbjct: 126 RQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVL 185
Query: 190 KAIETQI 196
IE Q+
Sbjct: 186 SGIEEQV 192
>UNIPROTKB|F1SMV1 [details] [associations]
symbol:COPS7B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388
GeneTree:ENSGT00390000013069 EMBL:CU929067 EMBL:FP015777
Ensembl:ENSSSCT00000023412 OMA:VKTLHEX Uniprot:F1SMV1
Length = 177
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 92/171 (53%), Positives = 125/171 (73%)
Query: 11 TNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLK 70
+N LEQF+LLAK T G+A LI QVLEAPG+++F EL+++ ++EL +A Y LL
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 71 LFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
LFA+GTY DY+ KE L PE++ Q+ KL++LTIV+L+ KCIPY LL++L++ N+R
Sbjct: 69 LFAYGTYPDYIANKESL--PELSTAQQNKLKHLTIVSLASRMKCIPYSVLLRDLEMRNLR 126
Query: 131 DLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAW 181
+LEDLIIEA+Y+DII GKLDQRN LE+DF IGRDI D+ N++ W
Sbjct: 127 ELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEW 177
>DICTYBASE|DDB_G0271282 [details] [associations]
symbol:csn7 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0271282 GO:GO:0005737
GenomeReviews:CM000151_GR EMBL:AAFI02000006 GO:GO:0008180
eggNOG:NOG289374 KO:K12180 EMBL:DQ309435 RefSeq:XP_645677.1
STRING:Q55BD5 PRIDE:Q55BD5 EnsemblProtists:DDB0233106
GeneID:8617870 KEGG:ddi:DDB_G0271282 OMA:LEISESM
ProtClustDB:CLSZ2497283 Uniprot:Q55BD5
Length = 259
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 101/255 (39%), Positives = 151/255 (59%)
Query: 1 MVAEKASGVGTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTS 60
M ++ + N L+QFV+LAK++KG A V +I++ L P +F+F EL+DMP +++L +
Sbjct: 1 MTTQQETLTDGNALKQFVVLAKSSKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKET 60
Query: 61 PHAGYYHLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKL 120
YY LL +FA+G++ DY +K+ L P++T KL+ LTIV LS S IPY L
Sbjct: 61 EFKNYYDLLLIFAYGSFIDYKNKKDSL--PQLTPQMITKLKQLTIVFLSSTSNVIPYSVL 118
Query: 121 LKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQA 180
++++I+NVR+LEDLII++IY +II GKLDQ+N LE+DF+IGRD+ P + +MI
Sbjct: 119 QEQIEITNVRELEDLIIDSIYQNIIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNN 178
Query: 181 WSDSCANVLKAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQSQ-DTDDMMG 239
WS + +L I I ++ Q+ + + K + KN + Q D M
Sbjct: 179 WSSTSQKLLDDISGLITHSDKVHLQYRKEKEEFESKFEIAKLNTKNDSPAEQLYYDSMEY 238
Query: 240 SDNVVDKIGKKYKIK 254
SD V K G K K K
Sbjct: 239 SDEVRMKKGPKIKGK 253
>RGD|1310070 [details] [associations]
symbol:Cops7a "COP9 signalosome subunit 7A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome" evidence=ISO]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 RGD:1310070 CTD:50813 eggNOG:NOG289374
HOGENOM:HOG000006003 HOVERGEN:HBG051138 KO:K12180 OrthoDB:EOG42Z4R2
IPI:IPI00365695 RefSeq:NP_001040563.2 UniGene:Rn.154627
GeneID:312710 KEGG:rno:312710 NextBio:665200 EMBL:AB259153
RefSeq:NP_001157563.1 STRING:Q1JU69 PRIDE:Q1JU69 UCSC:RGD:1310070
InParanoid:Q1JU69 ArrayExpress:Q1JU69 Genevestigator:Q1JU69
Uniprot:Q1JU69
Length = 229
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 83/178 (46%), Positives = 116/178 (65%)
Query: 51 MPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSL 110
MP ++EL S A + LL +FA+GTY DYL E LP +T+ QK KL++L++VTL+
Sbjct: 1 MPNVRELADSDFASTFRLLTVFAYGTYADYLA--EARNLPLLTEAQKNKLRHLSVVTLAA 58
Query: 111 ESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGD 170
+ KCIPY LL+ L + NVR LEDL+IEA+Y+D++ G LDQRN LE+D++IGRDI D
Sbjct: 59 KVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQD 118
Query: 171 VTNMITEFQAWSDSCANVLKAIETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQT 228
++ + Q W C VL IE Q+ +AN K Q L I+ E+ N+KK++K T
Sbjct: 119 LSAIAQTLQEWCVGCEVVLSGIEEQVSRANLHKEQQLGLKQQIESEVANLKKTIKVTT 176
>TAIR|locus:2205593 [details] [associations]
symbol:FUS5 "FUSCA 5" species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0004708 "MAP kinase
kinase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] [GO:0008180
"signalosome" evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009585
GO:GO:0008180 EMBL:U89959 GO:GO:0010388 GO:GO:0010387
eggNOG:NOG289374 HOGENOM:HOG000006003 KO:K12180 OMA:NTLQEWC
EMBL:AF063852 EMBL:AF395065 EMBL:AF395066 EMBL:AF372934
EMBL:AY133518 EMBL:AY087971 IPI:IPI00523211 IPI:IPI00526282
PIR:T52188 RefSeq:NP_563645.1 RefSeq:NP_849576.1 UniGene:At.10718
PDB:3CHM PDBsum:3CHM ProteinModelPortal:Q94JU3 SMR:Q94JU3
IntAct:Q94JU3 STRING:Q94JU3 PaxDb:Q94JU3 PRIDE:Q94JU3
EnsemblPlants:AT1G02090.1 GeneID:839241 KEGG:ath:AT1G02090
GeneFarm:4561 TAIR:At1g02090 InParanoid:Q94JU3 PhylomeDB:Q94JU3
ProtClustDB:CLSN2687617 EvolutionaryTrace:Q94JU3
Genevestigator:Q94JU3 Uniprot:Q94JU3
Length = 260
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 83/235 (35%), Positives = 135/235 (57%)
Query: 14 LEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFA 73
++Q V A T K A LI + P +F F E++ +P + +L+ + + Y LL+LFA
Sbjct: 11 IDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDSVYLDLLRLFA 70
Query: 74 HGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLE 133
HGT+ DY + +LP ++ Q KL+ LT++TL+ +K +PYD L+ ELD+SNVR+LE
Sbjct: 71 HGTWGDY--KCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELE 128
Query: 134 DLII-EAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
D +I E +Y+ I+ GKLDQ E+ FA GRD+ PG + NM+ W ++ N+L +I
Sbjct: 129 DFLINECMYAGIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISI 188
Query: 193 ETQIGKANSEKHQHLAHSNAIDMEILNIKKSLKNQTNQS-QDTDDMMGSDN-VVD 245
+ +I A++ H + + +KKSL + + + +M G + V+D
Sbjct: 189 QDKIKWADNMSEMDKKHRKEAEEGVEEVKKSLSMKGDVDIRGNKEMFGEPSGVMD 243
>UNIPROTKB|F5H4U8 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758
ChiTaRS:COPS7A EMBL:AC125494 IPI:IPI01014125
ProteinModelPortal:F5H4U8 SMR:F5H4U8 Ensembl:ENST00000544725
ArrayExpress:F5H4U8 Bgee:F5H4U8 Uniprot:F5H4U8
Length = 125
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 64/120 (53%), Positives = 85/120 (70%)
Query: 10 GTNPLEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLL 69
G N EQF+LLAK+ KGAA LI QVLEAPG+++F EL+DMP ++EL S A + LL
Sbjct: 9 GQNQ-EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLL 67
Query: 70 KLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNV 129
+FA+GTY DYL E LP +T+ QK KL++L++VTL+ + KCIPY LL+ L + NV
Sbjct: 68 TVFAYGTYADYLA--EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNV 125
>ASPGD|ASPL0000016167 [details] [associations]
symbol:acoB species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IPI] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 EMBL:BN001302 EMBL:AACD01000061 GO:GO:0008180
eggNOG:NOG289374 KO:K12180 EMBL:U18265 RefSeq:XP_661227.1
STRING:Q00648 EnsemblFungi:CADANIAT00005117 GeneID:2873045
KEGG:ani:AN3623.2 HOGENOM:HOG000192225 OMA:LLEIFAW
OrthoDB:EOG43NBNQ Uniprot:Q00648
Length = 327
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 64/215 (29%), Positives = 117/215 (54%)
Query: 14 LEQFVLLAKTTKGAAA---VELIKQVLEAPGIFMFKELIDMPLIKEL---DT-SPHAGYY 66
L+ F+ L ++ + +I +P ++F EL++ P ++ L DT + Y
Sbjct: 12 LQSFIALTDSSSATSPRYIASIITNATSSPHTYVFAELLERPAVQALRSPDTPAEFQSYL 71
Query: 67 HLLKLFAHGTYQDYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDI 126
LL++FA GT+QDY ++ LP +++ Q +KL+ LT+++L+ K + Y+ L+ L +
Sbjct: 72 TLLEIFAWGTWQDY---QQTPNLPPLSEEQARKLRLLTLLSLASTIKPLTYEALMTSLSL 128
Query: 127 SNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDF-AIG--RDINPGDVTNMITEFQAWSD 183
S +LE L+ AIYS +I G+L + ++ ++ RD+ P + MI+ AW
Sbjct: 129 SAPSELESLVTTAIYSSLITGRLSPATNPPTVNVTSVAPLRDVKPSSLPTMISTLTAWEA 188
Query: 184 SCANVLKAIETQIGK--ANSEKHQHLAHSNAIDME 216
C +V+ IET+I K A+S + + H+ A+ +E
Sbjct: 189 RCGSVISDIETEIAKIRADSAQRRQKEHARAVAIE 223
>TAIR|locus:2076517 [details] [associations]
symbol:AT3G02200 "AT3G02200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000502 UniGene:At.41171 eggNOG:NOG253821 KO:K15030
OMA:IQANKVT EMBL:AY062722 EMBL:AY093343 IPI:IPI00518990
RefSeq:NP_186869.2 UniGene:At.21256 UniGene:At.67677
UniGene:At.73005 ProteinModelPortal:Q8W4A0 STRING:Q8W4A0
PaxDb:Q8W4A0 PRIDE:Q8W4A0 DNASU:821267 EnsemblPlants:AT3G02200.2
GeneID:821267 KEGG:ath:AT3G02200 TAIR:At3g02200
HOGENOM:HOG000005880 InParanoid:Q8W4A0 PhylomeDB:Q8W4A0
ProtClustDB:CLSN2687479 Genevestigator:Q8W4A0 Uniprot:Q8W4A0
Length = 417
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/200 (26%), Positives = 101/200 (50%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDT-SPHAGYYHLLKLFAHGTYQDYLK-QKEE 86
AV + + ++A IF +L+D+P + +L+ + +A Y LLK+F Y + Q
Sbjct: 223 AVRAVIEFVKASSIFQC-DLLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNAN 281
Query: 87 LKLPEMTQLQKK----KLQNLTIVTL-SLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
+ L + K++ L++V L S ES IPY + L + N +D+E I++AI
Sbjct: 282 SGFLQSYGLSNEDCVTKMRLLSLVDLASDESGKIPYTSIKDTLQV-NEQDVELWIVKAIT 340
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKANS 201
+ +I K+DQ N L + + R+ ++ T+ W D+ ++++ IE+ K
Sbjct: 341 AKLIECKMDQMNQVLIVSRSSEREFGTKQWQSLRTKLATWKDNISSIITTIESN--KVTE 398
Query: 202 EKHQHLAHSNAIDMEILNIK 221
E Q + S+A ++ L+++
Sbjct: 399 EGSQ-ASSSSAAAIQGLSVR 417
>TAIR|locus:504955552 [details] [associations]
symbol:AT4G19006 "AT4G19006" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0030163 GO:GO:0000502
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
EMBL:AY230842 EMBL:AK117761 IPI:IPI00529601 RefSeq:NP_680721.2
UniGene:At.21756 ProteinModelPortal:Q8GYA6 IntAct:Q8GYA6
STRING:Q8GYA6 PaxDb:Q8GYA6 PRIDE:Q8GYA6 EnsemblPlants:AT4G19006.1
GeneID:827638 KEGG:ath:AT4G19006 TAIR:At4g19006 InParanoid:Q8GYA6
PhylomeDB:Q8GYA6 ProtClustDB:CLSN2690225 Genevestigator:Q8GYA6
Uniprot:Q8GYA6
Length = 386
Score = 150 (57.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 20 LAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT--- 76
L+++ K A +L L I+ F EL+ P++K L + YH+L+ F HG
Sbjct: 193 LSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYHILQAFNHGDLVQ 252
Query: 77 YQDYLK-QKEELKL-PEMTQLQKKKLQNLTIVTL-------SLESKCIPYDKLLKELDIS 127
YQ+ + L P + + +KK L+ + I+ L E + IP + + +S
Sbjct: 253 YQELCRVHNASLSAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTIPLSVIAERTKLS 312
Query: 128 NVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCAN 187
+ D+E L+++++ +I G LDQ N ++ + +A R + + ++ + +W D
Sbjct: 313 -IEDVEHLLMKSLSVHLIEGILDQVNGTVYVSWAQPRVLGIPQIKSLRDQLDSWVDKVHT 371
Query: 188 VLKAIETQ 195
L ++E +
Sbjct: 372 TLLSVEAE 379
Score = 38 (18.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 11 TNPLEQFVLLAKTTKGAAAVEL 32
T LEQF+ L+ G A ++L
Sbjct: 37 TLKLEQFIALSVFQAGDALIQL 58
>DICTYBASE|DDB_G0287005 [details] [associations]
symbol:DDB_G0287005 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0287005 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AAFI02000095 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 RefSeq:XP_637434.1 STRING:Q54KZ8
EnsemblProtists:DDB0238518 GeneID:8625903 KEGG:ddi:DDB_G0287005
OMA:IQANKVT Uniprot:Q54KZ8
Length = 401
Score = 150 (57.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 43/173 (24%), Positives = 83/173 (47%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELD---TSPHAGYYHLLKLFAHGTYQDYLK-QK 84
AV + + + ++ L+D+P ++ L+ S ++ Y L+K+FA +L+ Q+
Sbjct: 215 AVRVCIESISLQELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQ 274
Query: 85 EELKLPEMTQLQK----KKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
+ L +K++ L++ TL+ E +PY + K L I ++E +I A+
Sbjct: 275 KNPNFLSTIGLSNDDCLQKIRLLSLATLTSEQSKVPYSLISKMLQIDE-NEVEMWVINAM 333
Query: 141 YSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE 193
D++ KLDQ N + ++ + R N + + F W S N+L+ IE
Sbjct: 334 EGDLLDAKLDQLNRIVNVNSSTQRVFNKSQWSQLGQRFSVWKSSVKNLLQVIE 386
>TAIR|locus:2171998 [details] [associations]
symbol:AT5G45620 "AT5G45620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000502 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV ProtClustDB:CLSN2690225
EMBL:AY093136 EMBL:BT003384 EMBL:AY230841 IPI:IPI00516535
RefSeq:NP_199375.2 UniGene:At.23294 UniGene:At.74818
ProteinModelPortal:Q8RWF0 IntAct:Q8RWF0 STRING:Q8RWF0 PaxDb:Q8RWF0
PRIDE:Q8RWF0 EnsemblPlants:AT5G45620.1 GeneID:834602
KEGG:ath:AT5G45620 TAIR:At5g45620 InParanoid:Q8RWF0
PhylomeDB:Q8RWF0 ArrayExpress:Q8RWF0 Genevestigator:Q8RWF0
Uniprot:Q8RWF0
Length = 386
Score = 145 (56.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 44/188 (23%), Positives = 89/188 (47%)
Query: 20 LAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGT--- 76
L+++ K A +L L I+ F EL+ P++K L + YH+L+ F HG
Sbjct: 193 LSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYHILQAFNHGDLVQ 252
Query: 77 YQDYLKQKEE--LKLPEMTQLQKKKLQNLTIVTL-------SLESKCIPYDKLLKELDIS 127
YQ+ + + P + + +KK L+ + I+ L E + IP + + +S
Sbjct: 253 YQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLS 312
Query: 128 NVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCAN 187
+ D+E L+++++ +I G +DQ N ++ + +A R + + + + +W D
Sbjct: 313 -IEDVEHLLMKSLSVHLIEGIIDQVNGTIYVSWAQPRVLGIPQIKALRDQLDSWVDKVHT 371
Query: 188 VLKAIETQ 195
L ++E +
Sbjct: 372 TLLSVEAE 379
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 11 TNPLEQFVLLAKTTKGAAAVE 31
T LEQF+ LA G A ++
Sbjct: 37 TLKLEQFIALAVFQAGDALIQ 57
>WB|WBGene00019543 [details] [associations]
symbol:cif-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0009792
GO:GO:0005737 GO:GO:0030154 GO:GO:0000003 GO:GO:0048477
GO:GO:0003743 GO:GO:0008180 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 EMBL:FO081041 PIR:T30020 RefSeq:NP_500618.1
ProteinModelPortal:Q94261 SMR:Q94261 DIP:DIP-27147N IntAct:Q94261
MINT:MINT-1039802 STRING:Q94261 PaxDb:Q94261
EnsemblMetazoa:K08F11.3.1 EnsemblMetazoa:K08F11.3.2
EnsemblMetazoa:K08F11.3.3 EnsemblMetazoa:K08F11.3.4 GeneID:177236
KEGG:cel:CELE_K08F11.3 UCSC:K08F11.3.1 CTD:177236 WormBase:K08F11.3
GeneTree:ENSGT00390000004456 HOGENOM:HOG000112352 InParanoid:Q94261
OMA:PNTFLLD NextBio:895926 Uniprot:Q94261
Length = 390
Score = 141 (54.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/136 (33%), Positives = 72/136 (52%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLK--QK-- 84
A+E ++ + P F F L + +K L TS + L+LF GT +DY + K
Sbjct: 212 AMECVRTAVVDPKSFSFDHLERLSAVKALKTSDPL-MFTALELFISGTLKDYKEFVAKNP 270
Query: 85 ----EELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
E LK+ E L KK++ LT+++L+ E I D+L K+LDI LE+ +I+AI
Sbjct: 271 KFVTEHLKVDETILL--KKIRLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVIDAI 328
Query: 141 YSDIIHGKLDQRNSSL 156
+ I GK+++ +L
Sbjct: 329 QVNAISGKINEMARTL 344
>UNIPROTKB|Q94261 [details] [associations]
symbol:cif-1 "COP9/Signalosome and eIF3 complex-shared
subunit 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0030154
GO:GO:0000003 GO:GO:0048477 GO:GO:0003743 GO:GO:0008180
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 EMBL:FO081041 PIR:T30020
RefSeq:NP_500618.1 ProteinModelPortal:Q94261 SMR:Q94261
DIP:DIP-27147N IntAct:Q94261 MINT:MINT-1039802 STRING:Q94261
PaxDb:Q94261 EnsemblMetazoa:K08F11.3.1 EnsemblMetazoa:K08F11.3.2
EnsemblMetazoa:K08F11.3.3 EnsemblMetazoa:K08F11.3.4 GeneID:177236
KEGG:cel:CELE_K08F11.3 UCSC:K08F11.3.1 CTD:177236 WormBase:K08F11.3
GeneTree:ENSGT00390000004456 HOGENOM:HOG000112352 InParanoid:Q94261
OMA:PNTFLLD NextBio:895926 Uniprot:Q94261
Length = 390
Score = 141 (54.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/136 (33%), Positives = 72/136 (52%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLK--QK-- 84
A+E ++ + P F F L + +K L TS + L+LF GT +DY + K
Sbjct: 212 AMECVRTAVVDPKSFSFDHLERLSAVKALKTSDPL-MFTALELFISGTLKDYKEFVAKNP 270
Query: 85 ----EELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
E LK+ E L KK++ LT+++L+ E I D+L K+LDI LE+ +I+AI
Sbjct: 271 KFVTEHLKVDETILL--KKIRLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVIDAI 328
Query: 141 YSDIIHGKLDQRNSSL 156
+ I GK+++ +L
Sbjct: 329 QVNAISGKINEMARTL 344
>FB|FBgn0028691 [details] [associations]
symbol:Rpn9 "Regulatory particle non-ATPase 9" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0007096 "regulation of exit from mitosis"
evidence=IMP] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:AE014297 GO:GO:0006508 GO:GO:0004175 GO:GO:0008541
eggNOG:NOG272621 KO:K03039 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:AF145311 EMBL:AY061232 RefSeq:NP_651177.1 RefSeq:NP_732899.1
UniGene:Dm.3423 IntAct:Q7KMP8 STRING:Q7KMP8
EnsemblMetazoa:FBtr0084469 EnsemblMetazoa:FBtr0084470 GeneID:42802
KEGG:dme:Dmel_CG10230 UCSC:CG10230-RA CTD:42802 FlyBase:FBgn0028691
InParanoid:Q7KMP8 OrthoDB:EOG4K0P3Z GenomeRNAi:42802 NextBio:830641
Uniprot:Q7KMP8
Length = 382
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/162 (20%), Positives = 77/162 (47%)
Query: 41 GIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEEL-KLPEMTQLQKKK 99
G++ EL+ P+++ L + + LLK F G + K+ K+P++ + K
Sbjct: 214 GVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFNDMKKIWSKIPDLAAQEVKL 273
Query: 100 LQNLTIVTL-SLESKCIPYDKLLKELDISN-----VRDLEDLIIEAIYSDIIHGKLDQRN 153
Q ++++ L + K ++ + DI+ +++E LI++A+ D++ G++DQ
Sbjct: 274 RQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELLIMKALALDLVRGEIDQVA 333
Query: 154 SSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQ 195
+ + + R +N + M + W + N+ K +E +
Sbjct: 334 GVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLMENR 375
>TAIR|locus:2180917 [details] [associations]
symbol:AT5G15610 "AT5G15610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
EMBL:CP002688 GO:GO:0000502 EMBL:AL391143 KO:K15030
HOGENOM:HOG000005880 ProtClustDB:CLSN2687479 EMBL:AY099844
EMBL:BT000340 IPI:IPI00545684 PIR:T51539 RefSeq:NP_197065.1
UniGene:At.25003 ProteinModelPortal:Q9LF21 SMR:Q9LF21 PRIDE:Q9LF21
EnsemblPlants:AT5G15610.1 GeneID:831413 KEGG:ath:AT5G15610
TAIR:At5g15610 InParanoid:Q9LF21 OMA:RCAEREF PhylomeDB:Q9LF21
Genevestigator:Q9LF21 Uniprot:Q9LF21
Length = 442
Score = 115 (45.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPH-AGYYHLLKLFAHGTYQDYLK-QKEE 86
AV + + ++AP IF +L+D P + +L+ P+ A Y LLK+F Y++ Q
Sbjct: 223 AVRAVIEFVKAPSIFQC-DLLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNAN 281
Query: 87 LKLPEMTQLQKK----KLQNLTIVTL-SLESKCIPYDKLLKELDISNVRDLEDLIIEAIY 141
+ L ++ K++ L++V L S +S IPY + L + N ++E +++AI
Sbjct: 282 SGFLQTYGLVEEDCVAKMRLLSLVDLASDDSGKIPYASIKNTLQV-NDEEVELWVVKAIT 340
Query: 142 SDIIHGKLDQRN 153
+ ++ K+DQ N
Sbjct: 341 AKLVACKMDQMN 352
Score = 50 (22.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 176 TEFQAWSDSCANVLKAIETQIGKANSEKHQ 205
T+ AW D+ NV+ IE+ KA E Q
Sbjct: 404 TKLAAWRDNVRNVISTIESN--KATEEGTQ 431
>POMBASE|SPAC1952.12c [details] [associations]
symbol:csn71 "COP9/signalosome complex subunit 7a
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPAC1952.12c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0008180 GO:GO:0010388 PIR:T37940
RefSeq:NP_594814.1 STRING:Q9UUJ7 EnsemblFungi:SPAC1952.12c.1
GeneID:2542127 KEGG:spo:SPAC1952.12c eggNOG:KOG3250
OrthoDB:EOG4DRDP5 NextBio:20803199 Uniprot:Q9UUJ7
Length = 205
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 44/210 (20%), Positives = 100/210 (47%)
Query: 31 ELIKQVLEAPGIFMFKEL-IDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELKL 89
E I Q ++ P +F F+EL I+ +++ A L++F G +D + EL+
Sbjct: 3 EKISQAIDDPNVFCFQELWIECQEVQKSQPIDSA-VLRTLEIFCRGDIRDASSEWNELRF 61
Query: 90 PEMTQLQKKKLQNLTIVTLSLE--SKCIPYDKLLKELDISNV--RD----LEDLIIEAIY 141
KKL+ LT++ L+ + ++ +L L + + D +E I++A+
Sbjct: 62 --------KKLRLLTLIDLANRHVGSSVSFETILVHLQLDRLPPSDPTFTVEYYIMQAMM 113
Query: 142 SDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIE--TQIGKA 199
+ I+ GK++ + +L + +A+ R ++ + M + + C+N+L ++ T
Sbjct: 114 NQILVGKINAKTQTLHVSWALERFLDSKRIDEMKYSLDRFIERCSNILFQLDAGTPSVSK 173
Query: 200 NSEKHQHLAHSNAIDMEILNIKKSLKNQTN 229
+ ++ ++ S+ ID + + K+ + T+
Sbjct: 174 SFKRASRMSSSDGIDYMVFD-KRPRPDDTD 202
>FB|FBgn0033902 [details] [associations]
symbol:Tango7 "Transport and Golgi organization 7"
species:7227 "Drosophila melanogaster" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 EMBL:AE013599 GO:GO:0005829
GO:GO:0005794 GO:GO:0005875 GO:GO:0003824 GO:GO:0009306
GO:GO:0003743 GO:GO:0007030 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY118924 RefSeq:NP_610932.1 UniGene:Dm.3068
ProteinModelPortal:Q7JVI3 SMR:Q7JVI3 IntAct:Q7JVI3 STRING:Q7JVI3
PaxDb:Q7JVI3 PRIDE:Q7JVI3 EnsemblMetazoa:FBtr0087579 GeneID:36565
KEGG:dme:Dmel_CG8309 CTD:36565 FlyBase:FBgn0033902
InParanoid:Q7JVI3 OrthoDB:EOG4TTF0C PhylomeDB:Q7JVI3
GenomeRNAi:36565 NextBio:799232 Bgee:Q7JVI3 Uniprot:Q7JVI3
Length = 387
Score = 123 (48.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/188 (23%), Positives = 84/188 (44%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHG---TY-QDYLKQK 84
A++ I L P F+ L+ + ++ L+ + LL +F Y Q Y +
Sbjct: 205 AMKCIVTALADPNTFLLDPLLSLKPVRFLEGDL---IHDLLSIFVSEKLPAYVQFYEDHR 261
Query: 85 EELKLPEMTQLQK-KKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSD 143
E + + Q KK++ LT + L+ S + ++ L KEL I N ++E +IE + +
Sbjct: 262 EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQI-NEDEVEPFVIEVLKTK 320
Query: 144 IIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKANSE- 202
++ +LDQ N + + + R + QAW ++ + V + + T + A +
Sbjct: 321 LVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGL-TSVSSAQLDL 379
Query: 203 -KHQHLAH 209
+ Q L H
Sbjct: 380 ARSQKLIH 387
>UNIPROTKB|Q292F0 [details] [associations]
symbol:Tango7 "Eukaryotic translation initiation factor 3
subunit M" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 GO:GO:0005794 GO:GO:0003824
GO:GO:0009306 GO:GO:0003743 EMBL:CM000071 GenomeReviews:CM000071_GR
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 OMA:PNTFLLD
OrthoDB:EOG4TTF0C RefSeq:XP_001360337.1 GeneID:4803654
KEGG:dpo:Dpse_GA20974 FlyBase:FBgn0080963 InParanoid:Q292F0
Uniprot:Q292F0
Length = 387
Score = 121 (47.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 42/188 (22%), Positives = 84/188 (44%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLK----QK 84
A++ I L P F+ L+ + ++ L+ + LL +F Y++ K
Sbjct: 205 AMKCIVTALADPNTFLLDPLLALKPVRFLEGDL---IHDLLSIFVSDKLPSYVQFYEDHK 261
Query: 85 EELKLPEMTQLQK-KKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSD 143
E + + Q KK++ LT + L+ + + +D L KEL I+ ++E +I+ + +
Sbjct: 262 EFVNSQGLNHEQNMKKMRLLTFMQLAESNPEMTFDTLTKELQITE-DEVEPFVIQVLKTK 320
Query: 144 IIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKANSE- 202
++ +LDQ N + + + R + QAW ++ ++V + T + A E
Sbjct: 321 LVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVRDGL-TNVSSAQLEL 379
Query: 203 -KHQHLAH 209
+ Q L H
Sbjct: 380 ARTQKLIH 387
>POMBASE|SPAC1751.03 [details] [associations]
symbol:SPAC1751.03 "translation initiation factor eIF3m"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IDA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IC]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 PomBase:SPAC1751.03
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003743 GO:GO:0002183 GO:GO:0016282 GO:GO:0071541 KO:K15030
HAMAP:MF_03012 OMA:IQANKVT OrthoDB:EOG441TM5 EMBL:AB016218
PIR:T43387 PIR:T50090 RefSeq:NP_592913.2 STRING:Q09722
EnsemblFungi:SPAC1751.03.1 GeneID:2542347 KEGG:spo:SPAC1751.03
NextBio:20803407 Uniprot:Q09722
Length = 402
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 46/202 (22%), Positives = 92/202 (45%)
Query: 14 LEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFA 73
L + V + +T A EL+++ + +P F F +++ +P +++L+ S LL + +
Sbjct: 196 LLEAVKMDNSTADEAVRELVQRAVNSPKYFFFDDIVTLPPVQQLEQST----LQLLGILS 251
Query: 74 HGTYQDYLKQKEE-------LKLPEMTQLQKKKLQNLTIVTLSLES--KCIPYDKLLKEL 124
G DY+ E K E +K KL LTI +L+ ++ + Y + K L
Sbjct: 252 GGMTDDYVSWVAENHAHCQHQKFDEDAIARKMKL--LTIASLATQAPNNTLSYGDVAKSL 309
Query: 125 DISNVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDS 184
I ++E II+ I + ++ G++ Q +L + + R + + + W S
Sbjct: 310 KIDE-NEVELWIIDVIRAGLVEGRMSQLTKTLSIHRSSYRVFGKHEWVALHEKLAKWGSS 368
Query: 185 CANVLKAIETQIGK---ANSEK 203
+L+ +E + A+S+K
Sbjct: 369 LRYMLQVMEQPLSSFTIASSKK 390
>UNIPROTKB|A4RK68 [details] [associations]
symbol:MGG_01595 "Eukaryotic translation initiation factor
3 subunit M" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003743 EMBL:CM001232 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OrthoDB:EOG441TM5 RefSeq:XP_003714574.1
STRING:A4RK68 EnsemblFungi:MGG_01595T0 GeneID:2679451
KEGG:mgr:MGG_01595 Uniprot:A4RK68
Length = 432
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 40/191 (20%), Positives = 85/191 (44%)
Query: 29 AVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK 88
A+ ++ + +P F+++ +P + L S H +Y LL++F DY +EE +
Sbjct: 216 ALRALRSAISSPTRLSFEDIRALPAVHALSES-HPVHYQLLQIFGEQDLDDYDDFREEHE 274
Query: 89 -LPEMTQLQK----KKLQNLTIVTL---SLESKCIPYDKLLKELDISNVRDLEDLIIEAI 140
E L +K++ LT +L S++++ I Y+ + K L I + D+E I+ I
Sbjct: 275 GFIEKENLDNEVLYRKMRLLTFASLAAASMQTREISYNSITKALQIPS-EDVEMWAIDVI 333
Query: 141 YSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIETQIGKAN 200
+ ++ GKL Q+ + R + + + + + +L+ + + A
Sbjct: 334 RAGLVEGKLSQKKKVFLIHSVRYRVFGEKQWRQLASSLEKTKKTVSTLLQTLRREEANAQ 393
Query: 201 SEKHQHLAHSN 211
E + L ++
Sbjct: 394 QEAERKLVEAS 404
>SGD|S000002835 [details] [associations]
symbol:RPN9 "Non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0034515 "proteasome storage granule"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 SGD:S000002835 EMBL:U33007 GO:GO:0005198
EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043248
GO:GO:0008541 GO:GO:0006511 RefSeq:NP_010720.3 GeneID:852042
KEGG:sce:YDR432W GO:GO:0034515 PDB:4B4T PDBsum:4B4T
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
GeneTree:ENSGT00390000001802 OrthoDB:EOG4XSPZG PIR:S69708
RefSeq:NP_010715.3 ProteinModelPortal:Q04062 DIP:DIP-5261N
IntAct:Q04062 MINT:MINT-529103 STRING:Q04062 PaxDb:Q04062
PeptideAtlas:Q04062 EnsemblFungi:YDR427W GeneID:852037
KEGG:sce:YDR427W CYGD:YDR427w NextBio:970278 Genevestigator:Q04062
GermOnline:YDR427W Uniprot:Q04062
Length = 393
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 14 LEQFVLLAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKEL-DTSPHAGYYHLLKLF 72
LE + + A +L L I+ F EL+ P+++ + + S + + LL
Sbjct: 199 LEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNAL 258
Query: 73 AHGTYQ--DYLKQKEELKLPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVR 130
G + D L + + K+P + Q + Q + ++TL +E+ + ++L DIS
Sbjct: 259 TVGDFDKFDSLIKVQISKIPILAQHESFLRQKICLMTL-IETVFVKNIRMLSFEDISKAT 317
Query: 131 DL-----EDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSC 185
L E L++ AI ++ G +DQ N + + + R I+ +T M W+D
Sbjct: 318 HLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISGDQITKMKDRLVEWNDQV 377
Query: 186 ANVLKAIETQ 195
+ K +E +
Sbjct: 378 EKLGKKMEAR 387
>UNIPROTKB|E2QWG8 [details] [associations]
symbol:EIF3M "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005852 "eukaryotic translation initiation
factor 3 complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005852
CTD:10480 KO:K15030 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AAEX03011403 RefSeq:XP_533160.1 ProteinModelPortal:E2QWG8
SMR:E2QWG8 PRIDE:E2QWG8 Ensembl:ENSCAFT00000011822 GeneID:475950
KEGG:cfa:475950 NextBio:20851694 Uniprot:E2QWG8
Length = 374
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 208 IVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNKDFID 264
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVRTKMVYC 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + AW + V ++
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|Q7L2H7 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9606 "Homo sapiens" [GO:0003743 "translation
initiation factor activity" evidence=IC] [GO:0006413 "translational
initiation" evidence=IC] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:CH471064 GO:GO:0006413 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 OMA:PNTFLLD EMBL:AY769947
EMBL:AF064603 EMBL:CR450300 EMBL:AK222564 EMBL:AK292139
EMBL:AK312512 EMBL:BC019103 EMBL:BC051292 EMBL:DQ185042
EMBL:AF277183 IPI:IPI00102069 RefSeq:NP_006351.2 UniGene:Hs.502244
ProteinModelPortal:Q7L2H7 SMR:Q7L2H7 DIP:DIP-31256N IntAct:Q7L2H7
MINT:MINT-4915331 STRING:Q7L2H7 PhosphoSite:Q7L2H7 DMDM:74754296
PaxDb:Q7L2H7 PeptideAtlas:Q7L2H7 PRIDE:Q7L2H7 DNASU:10480
Ensembl:ENST00000531120 GeneID:10480 KEGG:hsa:10480 UCSC:uc001mtu.3
GeneCards:GC11P032564 HGNC:HGNC:24460 HPA:HPA031063 MIM:609641
neXtProt:NX_Q7L2H7 PharmGKB:PA162384944 InParanoid:Q7L2H7
PhylomeDB:Q7L2H7 ChiTaRS:EIF3M GenomeRNAi:10480 NextBio:39758
ArrayExpress:Q7L2H7 Bgee:Q7L2H7 CleanEx:HS_EIF3M
Genevestigator:Q7L2H7 Uniprot:Q7L2H7
Length = 374
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 208 IVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNKDFID 264
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVRTKMVYC 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + AW + V ++
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|F1SGR0 [details] [associations]
symbol:EIF3M "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005852
CTD:10480 KO:K15030 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:CU856194 RefSeq:XP_003122934.1 UniGene:Ssc.3401
Ensembl:ENSSSCT00000014541 GeneID:100513781 KEGG:ssc:100513781
Uniprot:F1SGR0
Length = 374
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 208 IVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNKDFID 264
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVRTKMVYC 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + AW + V ++
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>MGI|MGI:1351744 [details] [associations]
symbol:Eif3m "eukaryotic translation initiation factor 3,
subunit M" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 MGI:MGI:1351744 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AL606494 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 GeneTree:ENSGT00390000004456
OMA:PNTFLLD EMBL:AK077480 EMBL:AK084738 EMBL:AK146222 EMBL:AK168066
EMBL:BC005598 EMBL:BC089568 EMBL:BC103795 EMBL:BC116787
EMBL:BC116789 IPI:IPI00115580 RefSeq:NP_663355.1 UniGene:Mm.379278
ProteinModelPortal:Q99JX4 SMR:Q99JX4 DIP:DIP-59784N STRING:Q99JX4
PhosphoSite:Q99JX4 PaxDb:Q99JX4 PRIDE:Q99JX4 DNASU:98221
Ensembl:ENSMUST00000028592 GeneID:98221 KEGG:mmu:98221
UCSC:uc008lkl.1 InParanoid:Q99JX4 NextBio:353368 Bgee:Q99JX4
Genevestigator:Q99JX4 Uniprot:Q99JX4
Length = 374
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 208 IVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNKDFID 264
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVRTKMVYC 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + AW + V ++
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|F1N5F7 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005852 IPI:IPI00717799 UniGene:Bt.5114
GeneTree:ENSGT00390000004456 OMA:PNTFLLD EMBL:DAAA02041245
Ensembl:ENSBTAT00000007021 Uniprot:F1N5F7
Length = 374
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 208 IVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLASYVKFYQNNKDFID 264
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELHIG-ADDVEAFVIDAVRTKMVYC 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + AW + V ++
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>DICTYBASE|DDB_G0285105 [details] [associations]
symbol:psmD13 "26S proteasome non-ATPase regulatory
subunit 13" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0285105 GenomeReviews:CM000153_GR GO:GO:0004175
GO:GO:0006511 EMBL:AAFI02000074 GO:GO:0005838 eggNOG:NOG272621
KO:K03039 RefSeq:XP_639866.1 STRING:Q54NQ0
EnsemblProtists:DDB0233004 GeneID:8624937 KEGG:ddi:DDB_G0285105
OMA:LAHPILE ProtClustDB:CLSZ2430421 Uniprot:Q54NQ0
Length = 385
Score = 113 (44.8 bits), Expect = 0.00061, P = 0.00061
Identities = 35/186 (18%), Positives = 86/186 (46%)
Query: 20 LAKTTKGAAAVELIKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQD 79
+++ + + A L L ++ F +LI P++K L+ S H LK F G Q
Sbjct: 193 ISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQQ 252
Query: 80 Y---LKQKEELKLPEMT---QLQK--KKLQNLTIVTLSL----ESKCIPYDKLLKELDIS 127
+ + Q ++ + +QK +K+ L+++ L+ + + I + K+ + +
Sbjct: 253 FEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKLP 312
Query: 128 NVRDLEDLIIEAIYSDIIHGKLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCAN 187
+ ++E L+++++ ++I G +DQ + + + R ++ + +M W++
Sbjct: 313 -LGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQINSMNNRIAEWTEKAKT 371
Query: 188 VLKAIE 193
L+ +E
Sbjct: 372 SLRLVE 377
>UNIPROTKB|Q3T148 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743
EMBL:BC102130 IPI:IPI00717799 RefSeq:NP_001030389.2 UniGene:Bt.5114
STRING:Q3T148 PRIDE:Q3T148 GeneID:515543 KEGG:bta:515543 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844
InParanoid:Q3T148 KO:K15030 OrthoDB:EOG4FFD21 NextBio:20871877
HAMAP:MF_03012 Uniprot:Q3T148
Length = 373
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 34/164 (20%), Positives = 75/164 (45%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHG--TYQDYLKQKEEL--K 88
I + L+ P F+F L+ + +K L+ + LL +F Y + + ++
Sbjct: 208 IVRALKDPNAFLFDHLLTLKPVKFLEGEL---IHDLLTIFVSAKLAYVKFYQNNKDFIDS 264
Query: 89 LPEMTQLQKKKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHGK 148
L + + K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++ K
Sbjct: 265 LGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVRTKMVYCK 323
Query: 149 LDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
+DQ + + + R + AW + V ++
Sbjct: 324 IDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 367
>ZFIN|ZDB-GENE-040426-2643 [details] [associations]
symbol:eif3m "eukaryotic translation initiation
factor 3, subunit M" species:7955 "Danio rerio" [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-2643 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 CTD:10480 eggNOG:NOG253821
HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030 OrthoDB:EOG4FFD21
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY398350 EMBL:CR936403 EMBL:BC053188 IPI:IPI00491150
RefSeq:NP_001019906.1 UniGene:Dr.25567 STRING:Q7T3B0 PRIDE:Q7T3B0
Ensembl:ENSDART00000010256 GeneID:334626 KEGG:dre:334626
InParanoid:Q1L885 NextBio:20810484 Bgee:Q7T3B0 Uniprot:Q7T3B0
Length = 375
Score = 112 (44.5 bits), Expect = 0.00077, P = 0.00077
Identities = 33/167 (19%), Positives = 79/167 (47%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLK----QKEELK 88
I + L+ P ++F L+ + ++ L+ + LL +F Y+K K+ ++
Sbjct: 208 IVRALKDPNTYLFDHLLALKPVRFLEGEL---IHDLLTIFVSAKLISYVKFYQSNKDFIE 264
Query: 89 LPEMTQLQK-KKLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
++ Q K++ LT + +++E K I ++ + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLSHEQNMSKMRLLTFMGMAVEMKEISFETMQQELQIG-AEDVEAFVIDAVRTKMVYS 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAIET 194
K+DQ + + + R + +W + + V +++T
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLCSWKQNLSTVKSSLQT 370
>UNIPROTKB|Q5ZJ64 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9031 "Gallus gallus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 GeneTree:ENSGT00390000004456
OMA:PNTFLLD EMBL:AJ720570 IPI:IPI00587349 RefSeq:NP_001006406.1
UniGene:Gga.2429 STRING:Q5ZJ64 PRIDE:Q5ZJ64
Ensembl:ENSGALT00000019782 GeneID:421602 KEGG:gga:421602
InParanoid:Q5ZJ64 NextBio:20824344 ArrayExpress:Q5ZJ64
Uniprot:Q5ZJ64
Length = 374
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 35/165 (21%), Positives = 76/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 208 IVRALKDPNTFLFDHLLALKPVKFLEGEL---IHDLLTIFVSAKLVSYVKFYQNNKDFID 264
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 265 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVKTKMVYC 323
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + W + V ++
Sbjct: 324 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNQVKNSL 368
>UNIPROTKB|F1NZE2 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9031 "Gallus gallus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005852 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AADN02040176 IPI:IPI00822513 Ensembl:ENSGALT00000040077
ArrayExpress:F1NZE2 Uniprot:F1NZE2
Length = 375
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 35/165 (21%), Positives = 76/165 (46%)
Query: 33 IKQVLEAPGIFMFKELIDMPLIKELDTSPHAGYYHLLKLFAHGTYQDYLKQKEELK--LP 90
I + L+ P F+F L+ + +K L+ + LL +F Y+K + K +
Sbjct: 209 IVRALKDPNTFLFDHLLALKPVKFLEGEL---IHDLLTIFVSAKLVSYVKFYQNNKDFID 265
Query: 91 EMTQLQKK---KLQNLTIVTLSLESKCIPYDKLLKELDISNVRDLEDLIIEAIYSDIIHG 147
+ L ++ K++ LT + +++E+K I +D + +EL I D+E +I+A+ + +++
Sbjct: 266 SLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIG-ADDVEAFVIDAVKTKMVYC 324
Query: 148 KLDQRNSSLELDFAIGRDINPGDVTNMITEFQAWSDSCANVLKAI 192
K+DQ + + + R + W + V ++
Sbjct: 325 KIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNQVKNSL 369
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 267 0.00095 114 3 11 23 0.39 34
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 598 (64 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.17u 0.09s 26.26t Elapsed: 00:00:03
Total cpu time: 26.18u 0.09s 26.27t Elapsed: 00:00:03
Start: Thu Aug 15 13:02:52 2013 End: Thu Aug 15 13:02:55 2013