BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10892
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3U2V3|NUD18_MOUSE 8-oxo-dGDP phosphatase NUDT18 OS=Mus musculus GN=Nudt18 PE=2 SV=1
Length = 323
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 40 LTEQADFAPARGVIPESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAG 99
L + D PA + F RL+K V Y+V+AV +N ++ VLM+QEAK C G WYLPAG
Sbjct: 20 LVQSCDSEPAGKPL---FPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKRECRGTWYLPAG 76
Query: 100 KVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132
++E GET+ EA++REV EE GL P TLL+VE
Sbjct: 77 RMEPGETIVEAMQREVKEEAGLLCEPVTLLSVE 109
>sp|Q641Y7|NUD18_RAT 8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus GN=Nudt18 PE=2
SV=2
Length = 323
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
Query: 40 LTEQADFAPARGVIPESFVP-RLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPA 98
L + D PA + +P RL+K V Y+V+AV +N ++ VLM+QEAK C G WYLPA
Sbjct: 20 LVQSCDSEPAG----KPLLPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKRECRGTWYLPA 75
Query: 99 GKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132
G++E GET+ EA++REV EE GL P TLL+VE
Sbjct: 76 GRMEPGETIVEAMQREVKEEAGLLCEPVTLLSVE 109
>sp|Q6ZVK8|NUD18_HUMAN 8-oxo-dGDP phosphatase NUDT18 OS=Homo sapiens GN=NUDT18 PE=1 SV=3
Length = 323
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Query: 45 DFAPARGVIPESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEG 104
D APA G P RL+K V Y+V+AV ++ ++ VL++QEAK C G+WYLPAG++E G
Sbjct: 25 DSAPA-GEPPAPV--RLRKNVCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPG 81
Query: 105 ETLEEAVKREVLEETGLEMAPTTLLAVE 132
ET+ EA++REV EE GL P TLL+VE
Sbjct: 82 ETIVEALQREVKEEAGLHCEPETLLSVE 109
>sp|Q568Q0|NUD18_DANRE 8-oxo-dGDP phosphatase NUDT18 OS=Danio rerio GN=nudt18 PE=2 SV=1
Length = 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 61 LKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETG 120
L+K V YIV AVI NSK VLM+QEAK C G WYLPAG++EE E++ EA++REV EE G
Sbjct: 35 LRKNVCYIVGAVIFNSKEEVLMVQEAKRECYGRWYLPAGRMEECESILEALQREVREEAG 94
Query: 121 LEMAPTTLLAVE 132
++ P TLL V+
Sbjct: 95 IDCQPITLLLVQ 106
>sp|O45830|NDX1_CAEEL Putative nudix hydrolase 1 OS=Caenorhabditis elegans GN=ndx-1 PE=3
SV=1
Length = 365
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 60 RLKKTVTYIVMAVIINSKN---AVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVL 116
RL V Y+ A+I+ ++ VL++QEAK C G WY+PAG+VE GET+EEAV REV
Sbjct: 67 RLHDNVNYVAAAIILRNQGDDTEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVK 126
Query: 117 EETGLEMAPTTLLAVE 132
EETG LL+++
Sbjct: 127 EETGYSCDVVELLSLQ 142
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V ++++ + VL+M+ A NG W LP+G VE GE++EEA+ RE+ EETGL++ L
Sbjct: 278 VAGIVMDERGRVLLMKRAD---NGCWGLPSGHVERGESVEEAIVREIREETGLQVEVMRL 334
Query: 129 LAV 131
+ +
Sbjct: 335 VGL 337
>sp|Q9CA40|NUDT1_ARATH Nudix hydrolase 1 OS=Arabidopsis thaliana GN=NUDT1 PE=1 SV=1
Length = 147
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 63 KTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLE 122
+ + + + V I + N++L+ + SI N + LP G +E GE+ EE REV+EETGL+
Sbjct: 5 EAIPRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETGLK 64
Query: 123 MAPTTLLAV 131
+ LL V
Sbjct: 65 IEKMKLLTV 73
>sp|Q58549|ADPP_METJA ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=nudF PE=1 SV=1
Length = 169
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 61 LKKTVTYIVMAV----IINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVL 116
LKK Y+ AV II N +L+++ + G + LP G VE GET+EEAV RE+
Sbjct: 32 LKKYRLYLHPAVAVDGIIEKDNKILLIKRKNNPFKGCFALPGGFVECGETVEEAVVREIK 91
Query: 117 EETGLEMAPTTLLAVETA 134
EETGL +LL V ++
Sbjct: 92 EETGLIPKVKSLLGVYSS 109
>sp|P32090|MUTT_PROVU 8-oxo-dGTP diphosphatase OS=Proteus vulgaris GN=mutT PE=3 SV=1
Length = 112
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 61 LKKTVTYIVMAVIINSKNAVLMMQEA-KSICNGAWYLPAGKVEEGETLEEAVKREVLEET 119
+ K +I VI + N V + Q KS G W P GK+E+ ET E+A+ RE+ EE
Sbjct: 2 MDKKKLHIAAGVICDKHNNVFIAQRPLKSHMGGFWEFPGGKLEDNETPEQALLRELQEEI 61
Query: 120 GLEMAPTTLL 129
G+++ TLL
Sbjct: 62 GIDVTQCTLL 71
>sp|P53369|8ODP_RAT 7,8-dihydro-8-oxoguanine triphosphatase OS=Rattus norvegicus
GN=Nudt1 PE=1 SV=1
Length = 156
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 64 TVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEM 123
+ + + V++ VL+ + + G W GKV+EGET+E+ KRE+LEE+GL +
Sbjct: 2 STSRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGAKRELLEESGLRV 61
>sp|P53368|8ODP_MOUSE 7,8-dihydro-8-oxoguanine triphosphatase OS=Mus musculus GN=Nudt1
PE=1 SV=1
Length = 156
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 64 TVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
+ + + V++ VL+ + + G W GKV+EGET+E+ KRE+LEE+GL
Sbjct: 2 STSRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGAKRELLEESGL 59
>sp|Q94A82|NUD19_ARATH Nudix hydrolase 19, chloroplastic OS=Arabidopsis thaliana GN=NUDT19
PE=1 SV=1
Length = 438
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E+ R+ V +V+ ++I+ +N ++ W AG +E GE+LEEAV+RE
Sbjct: 233 ETCRKRVYPRVDPVVIMLVIDRENDRALLSRQSRYVPRMWSCLAGFIEPGESLEEAVRRE 292
Query: 115 VLEETGLEMA 124
EETG+E+
Sbjct: 293 TWEETGIEVG 302
>sp|Q4FQ54|RPPH_PSYA2 RNA pyrophosphohydrolase OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=rppH PE=3 SV=1
Length = 173
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V ++ N++ VL AK I + AW P G ++ GET +A+ RE+ EE GL L
Sbjct: 11 VGIILANTQGQVLW---AKRIGHNAWQFPQGGIDRGETPMDAMYRELWEEVGLHPRHVDL 67
Query: 129 LAV 131
LAV
Sbjct: 68 LAV 70
>sp|A6VMA3|RPPH_ACTSZ RNA pyrophosphohydrolase OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=rppH PE=3 SV=1
Length = 197
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI N K VL AK +W P G + EGET E+A+ RE+ EE GL+ +
Sbjct: 11 VGIVICNRKGQVLW---AKRYGQNSWQFPQGGINEGETPEQAMFRELFEEVGLQKKDVRV 67
Query: 129 L 129
L
Sbjct: 68 L 68
>sp|Q1Q8B6|RPPH_PSYCK RNA pyrophosphohydrolase OS=Psychrobacter cryohalolentis (strain
K5) GN=rppH PE=3 SV=1
Length = 173
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V ++ N++ VL AK I + AW P G ++ GET +A+ RE+ EE GL L
Sbjct: 11 VGIILANTQGQVLW---AKRIGHNAWQFPQGGIDRGETPMDAMYRELWEEVGLHPRHVDL 67
Query: 129 LAV 131
LAV
Sbjct: 68 LAV 70
>sp|A1SS92|RPPH_PSYIN RNA pyrophosphohydrolase OS=Psychromonas ingrahamii (strain 37)
GN=rppH PE=3 SV=1
Length = 181
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 70 MAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129
+ +II + NA ++ AK +W P G ++EGET E+A+ RE+ EE GL+ LL
Sbjct: 11 VGIIICNNNAQVLW--AKRFGQHSWQFPQGGIKEGETPEQAMYRELYEEVGLKPEHVKLL 68
Query: 130 AV 131
A
Sbjct: 69 AT 70
>sp|P65553|GMM_SHIFL GDP-mannose mannosyl hydrolase OS=Shigella flexneri GN=gmm PE=3
SV=1
Length = 159
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E F ++ T + ++ NS+ L+ + G W++P G+V++ ETLE A +R
Sbjct: 6 EDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERL 65
Query: 115 VLEETGLEMAPT 126
+ E GL + T
Sbjct: 66 TMAELGLRLPIT 77
>sp|P65552|GMM_ECO57 GDP-mannose mannosyl hydrolase OS=Escherichia coli O157:H7 GN=gmm
PE=3 SV=1
Length = 159
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E F ++ T + ++ NS+ L+ + G W++P G+V++ ETLE A +R
Sbjct: 6 EDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERL 65
Query: 115 VLEETGLEMAPT 126
+ E GL + T
Sbjct: 66 TMAELGLRLPIT 77
>sp|P32056|GMM_ECOLI GDP-mannose mannosyl hydrolase OS=Escherichia coli (strain K12)
GN=gmm PE=1 SV=2
Length = 159
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E F ++ T + ++ NS+ L+ + G W++P G+V++ ETLE A +R
Sbjct: 6 EDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERL 65
Query: 115 VLEETGLEMAPT 126
+ E GL + T
Sbjct: 66 TMAELGLRLPIT 77
>sp|C4LD21|RPPH_TOLAT RNA pyrophosphohydrolase OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=rppH PE=3 SV=1
Length = 174
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI N VL A+ +W P G V++GET E+A+ RE+ EE GL+ T+
Sbjct: 11 VGIVICNRNGQVLW---ARRYGQHSWQFPQGGVDDGETPEQAMFRELYEEIGLKQDDVTI 67
Query: 129 LA 130
LA
Sbjct: 68 LA 69
>sp|A4SIW4|RPPH_AERS4 RNA pyrophosphohydrolase OS=Aeromonas salmonicida (strain A449)
GN=rppH PE=3 SV=1
Length = 175
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI N VL AK +W P G V++GET E+A+ RE+ EE GL+ T+
Sbjct: 11 VGIVICNRDGQVLW---AKRYGQHSWQFPQGGVDDGETPEQAMYRELYEEIGLKPEDVTI 67
Query: 129 LA 130
+A
Sbjct: 68 MA 69
>sp|A0KG29|RPPH_AERHH RNA pyrophosphohydrolase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=rppH PE=3 SV=1
Length = 175
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI N VL AK +W P G V++GET E+A+ RE+ EE GL+ T+
Sbjct: 11 VGIVICNRDGQVLW---AKRYGQHSWQFPQGGVDDGETPEQAMYRELYEEIGLKPEDVTI 67
Query: 129 LA 130
+A
Sbjct: 68 MA 69
>sp|B8F8N4|RPPH_HAEPS RNA pyrophosphohydrolase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=rppH PE=3 SV=1
Length = 200
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI N + VL AK +W P G + EGE +E+A+ RE+ EE GL L
Sbjct: 11 VGIVICNKQGQVLW---AKRFGQNSWQFPQGGINEGENIEQAMYRELYEEVGLAKKDVRL 67
Query: 129 L 129
L
Sbjct: 68 L 68
>sp|A2SD39|RPPH_METPP RNA pyrophosphohydrolase OS=Methylibium petroleiphilum (strain PM1)
GN=rppH PE=3 SV=1
Length = 199
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V V++N +N V K I +W P G ++ GET E+A+ RE+ EE GL+ +
Sbjct: 11 VGIVLLNQRNQVFW---GKRIRTHSWQFPQGGIKYGETPEQAMYRELHEEVGLQPEHVRI 67
Query: 129 LA 130
LA
Sbjct: 68 LA 69
>sp|A1WKI2|RPPH_VEREI RNA pyrophosphohydrolase OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rppH PE=3 SV=1
Length = 221
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
V V++N KN V K I +W P G ++ GET E+A+ RE+ EE GL
Sbjct: 11 VGIVLLNQKNQVFW---GKRIRTHSWQFPQGGIDRGETPEQAMFRELHEEVGL 60
>sp|B8CQL0|RPPH_SHEPW RNA pyrophosphohydrolase OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=rppH PE=3 SV=1
Length = 173
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 70 MAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129
+ +II +++ +M A+ +W P G V+EGE+ EEA+ RE+ EE GL +L
Sbjct: 11 VGIIICNRSGQVMW--ARRFGQHSWQFPQGGVDEGESAEEAMYRELYEEVGLRPEHVQIL 68
Query: 130 A 130
A
Sbjct: 69 A 69
>sp|Q6LUM5|RPPH_PHOPR RNA pyrophosphohydrolase OS=Photobacterium profundum GN=rppH PE=3
SV=1
Length = 174
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI NS V A+ +W P G ++EGET E+A+ RE+ EE GL +
Sbjct: 11 VGIVICNSHGQVFW---ARRYGQHSWQFPQGGIDEGETPEQAMYRELYEEVGLTKKDVRI 67
Query: 129 LA 130
LA
Sbjct: 68 LA 69
>sp|A4VLQ5|NUDC_PSEU5 NADH pyrophosphatase OS=Pseudomonas stutzeri (strain A1501) GN=nudC
PE=3 SV=1
Length = 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 42 EQADFAPARGVIPESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKV 101
E+A + PA GV PRL ++ +++ ++ L++ + G + AG V
Sbjct: 125 ERAMYCPACGV---QHYPRLSPSM------IVLVTRGDELLLARSPRFAPGVYSTLAGYV 175
Query: 102 EEGETLEEAVKREVLEETGLEMAPTTLLAVE 132
E GE++E+ V REV EE G+++ P +A +
Sbjct: 176 EPGESVEQCVAREVREEVGVDIHPPQYIASQ 206
>sp|Q21YZ6|RPPH_RHOFD RNA pyrophosphohydrolase OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=rppH PE=3 SV=1
Length = 213
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
V V++N KN V K I +W P G ++ GET E+A+ RE+ EE GL
Sbjct: 11 VGIVLLNQKNQVFW---GKRIRTHSWQFPQGGIDRGETPEQAMIRELHEEVGL 60
>sp|Q94B74|NUDT2_ARATH Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
Length = 278
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 69 VMAVIINSKNAVLMMQE--AKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPT 126
+ A +IN VL++QE + G W P G V EGE + + REV EETG++
Sbjct: 115 IGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFD 174
Query: 127 TLLAV 131
+LA
Sbjct: 175 QILAF 179
>sp|Q0HSH4|RPPH_SHESR RNA pyrophosphohydrolase OS=Shewanella sp. (strain MR-7) GN=rppH
PE=3 SV=1
Length = 174
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 70 MAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129
+ +II ++ +M A+ +W P G V++GET EEA+ RE+ EE GL T+L
Sbjct: 11 VGIIICNRYGQVMW--ARRFGQHSWQFPQGGVDDGETAEEAMYRELYEEVGLRPEHVTIL 68
>sp|Q0HG81|RPPH_SHESM RNA pyrophosphohydrolase OS=Shewanella sp. (strain MR-4) GN=rppH
PE=3 SV=1
Length = 174
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 70 MAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129
+ +II ++ +M A+ +W P G V++GET EEA+ RE+ EE GL T+L
Sbjct: 11 VGIIICNRYGQVMW--ARRFGQHSWQFPQGGVDDGETAEEAMYRELYEEVGLRPEHVTIL 68
>sp|Q82UZ9|RPPH_NITEU RNA pyrophosphohydrolase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rppH PE=3 SV=1
Length = 187
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V +++NS+N V + A+ +W P G ++ GET EA+ RE+ EETGL+ +
Sbjct: 11 VGIILLNSQNQVFWGKRARQ---DSWQFPQGGIKSGETPTEAMYRELAEETGLQPVHVEI 67
Query: 129 LA 130
L
Sbjct: 68 LG 69
>sp|Q2YBW4|RPPH_NITMU RNA pyrophosphohydrolase OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rppH PE=3 SV=1
Length = 187
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V +++NSKN V K I +W P G ++ GE+ E+A+ RE+ EE GL +
Sbjct: 11 VGIILLNSKNEVFW---GKRIRQDSWQFPQGGIKPGESPEQAMYRELTEEVGLRPWHVQI 67
Query: 129 LA 130
L
Sbjct: 68 LG 69
>sp|O06972|YVCI_BACSU Uncharacterized Nudix hydrolase YvcI OS=Bacillus subtilis (strain
168) GN=yvcI PE=3 SV=1
Length = 158
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 65 VTYI--VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLE 122
+TY+ V ++ + + VL++Q+ + G W P GK+E GE++ ++V RE EETG+
Sbjct: 1 MTYLQRVTNCVLQTDDKVLLLQKPR---RGWWVAPGGKMESGESVRDSVIREYREETGIY 57
Query: 123 MAPTTLLAVET 133
+ L V T
Sbjct: 58 IINPQLKGVFT 68
>sp|Q4V8V2|NUD17_DANRE Nucleoside diphosphate-linked moiety X motif 17 OS=Danio rerio
GN=nudt17 PE=2 SV=1
Length = 300
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 10 ANHEAIITPVLEN---IFSGKVCHDGEDQCDYDLTEQADFAPARGVIPESFVPRLKKTVT 66
A +A ++ LEN I ++C G ++A F P + + V +T++
Sbjct: 35 AEDQATVSCSLENNRFILGDRLCDGGVP------LKRASFCPIKYLSDSEAVSLPSETLS 88
Query: 67 YIV---MAVIINSKNA-VLMMQEAKSICN--GAWYLPAGKVEEGETLEEAVKREVLEETG 120
V +AV++ S N +L+ + A S+ + W P G VE E L +A RE+LEETG
Sbjct: 89 RGVDVGVAVLLQSANQKLLLTRRASSLRSFPNVWVPPGGHVELDEKLLDAGLRELLEETG 148
Query: 121 LEMAP 125
L ++P
Sbjct: 149 LNLSP 153
>sp|P96590|MUTT_BACSU Putative 8-oxo-dGTP diphosphatase OS=Bacillus subtilis (strain 168)
GN=mutT PE=3 SV=1
Length = 149
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 66 TYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAP 125
T +++N +L+++ W LP G+V+ GE+ EEA RE+LEETG A
Sbjct: 3 TQGAFVIVLNESQQILLVKRKDVPL---WDLPGGRVDPGESAEEAAVREILEETGYNAAL 59
Query: 126 TTLLAV 131
+ + V
Sbjct: 60 SAKIGV 65
>sp|A6TGQ3|NUDC_KLEP7 NADH pyrophosphatase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=nudC PE=3 SV=1
Length = 257
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E + P++ + V I +A+L+ Q + NG + AG VE GETLE+AV RE
Sbjct: 121 ERYYPQIAPCII-----VAIRRDDAILLAQHTRHR-NGVHTVLAGFVEVGETLEQAVARE 174
Query: 115 VLEETGLEM 123
V+EE+G+ +
Sbjct: 175 VMEESGIRV 183
>sp|P57809|RPPH_PASMU RNA pyrophosphohydrolase OS=Pasteurella multocida (strain Pm70)
GN=rppH PE=3 SV=1
Length = 198
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI NSK VL AK +W P G + + E+ E+A+ RE+ EE GL +
Sbjct: 11 VGIVICNSKGQVLW---AKRYGQNSWQFPQGGINDNESAEQAMYRELFEEVGLSPKDVKI 67
Query: 129 LAV 131
L +
Sbjct: 68 LYI 70
>sp|Q15P42|RPPH_PSEA6 RNA pyrophosphohydrolase OS=Pseudoalteromonas atlantica (strain T6c
/ ATCC BAA-1087) GN=rppH PE=3 SV=1
Length = 174
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 69 VMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128
V VI NS V A+ +W P G ++EGET E+ + RE+ EE GL+ +
Sbjct: 11 VGIVICNSLGQVFW---ARRYGQHSWQFPQGGIDEGETAEQTMYRELYEEVGLKPEHVKI 67
Query: 129 LAV 131
LAV
Sbjct: 68 LAV 70
>sp|P36639|8ODP_HUMAN 7,8-dihydro-8-oxoguanine triphosphatase OS=Homo sapiens GN=NUDT1
PE=1 SV=3
Length = 197
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 72 VIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
V++ VL+ + + G W GKV+EGET+E+ +RE+ EE+GL
Sbjct: 51 VLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL 100
>sp|Q9SJC4|NUDT6_ARATH Nudix hydrolase 6 OS=Arabidopsis thaliana GN=NUDT6 PE=1 SV=1
Length = 283
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 26 GKVCHDGEDQCDYDLTEQADFAPARGVIPESFVPRLKKTVTYIVMAVIINSKNA-VLMMQ 84
G VCH E + + AD P+ +P + R+ V A ++N K VL++Q
Sbjct: 72 GFVCHHAEREYTMLTSWIAD-VPS--TLPANASHRIG------VGAFVLNKKTKEVLVVQ 122
Query: 85 EAKSICNGA--WYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLA 130
E G W LP G V+EGE + E REV EETG++ +LA
Sbjct: 123 EIDGHFKGTGVWKLPTGVVKEGENIWEGALREVEEETGIKTKFVEVLA 170
>sp|C3LR63|NUDC_VIBCM NADH pyrophosphatase OS=Vibrio cholerae serotype O1 (strain M66-2)
GN=nudC PE=3 SV=1
Length = 269
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 72 VIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
V + + +L+ Q + NG + + AG VE GETLE+ V REVLEETG+
Sbjct: 145 VAVRKQQQILLAQHPRHR-NGMYTVIAGFVEVGETLEQCVAREVLEETGI 193
>sp|Q9KV27|NUDC_VIBCH NADH pyrophosphatase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=nudC PE=3 SV=1
Length = 269
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 72 VIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
V + + +L+ Q + NG + + AG VE GETLE+ V REVLEETG+
Sbjct: 145 VAVRKQQQILLAQHPRHR-NGMYTVIAGFVEVGETLEQCVAREVLEETGI 193
>sp|A5F3M9|NUDC_VIBC3 NADH pyrophosphatase OS=Vibrio cholerae serotype O1 (strain ATCC
39541 / Ogawa 395 / O395) GN=nudC PE=3 SV=1
Length = 269
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 72 VIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121
V + + +L+ Q + NG + + AG VE GETLE+ V REVLEETG+
Sbjct: 145 VAVRKQQQILLAQHPRHR-NGMYTVIAGFVEVGETLEQCVAREVLEETGI 193
>sp|B4TQK6|NUDC_SALSV NADH pyrophosphatase OS=Salmonella schwarzengrund (strain CVM19633)
GN=nudC PE=3 SV=1
Length = 257
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E + P++ + V I ++++L+ Q + NG + AG VE GETLE+AV RE
Sbjct: 121 ERYYPQIAPCII-----VAIRREDSILLAQHVRHR-NGVHTVLAGFVEVGETLEQAVARE 174
Query: 115 VLEETGLEM 123
V+EE+G+++
Sbjct: 175 VMEESGIKV 183
>sp|C0Q2S8|NUDC_SALPC NADH pyrophosphatase OS=Salmonella paratyphi C (strain RKS4594)
GN=nudC PE=3 SV=1
Length = 257
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E + P++ + V I ++++L+ Q + NG + AG VE GETLE+AV RE
Sbjct: 121 ERYYPQIAPCII-----VAIRREDSILLAQHVRHR-NGVHTVLAGFVEVGETLEQAVARE 174
Query: 115 VLEETGLEM 123
V+EE+G+++
Sbjct: 175 VMEESGIKV 183
>sp|Q57H59|NUDC_SALCH NADH pyrophosphatase OS=Salmonella choleraesuis (strain SC-B67)
GN=nudC PE=3 SV=1
Length = 257
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E + P++ + V I ++++L+ Q + NG + AG VE GETLE+AV RE
Sbjct: 121 ERYYPQIAPCII-----VAIRREDSILLAQHVRHR-NGVHTVLAGFVEVGETLEQAVARE 174
Query: 115 VLEETGLEM 123
V+EE+G+++
Sbjct: 175 VMEESGIKV 183
>sp|B5F1H9|NUDC_SALA4 NADH pyrophosphatase OS=Salmonella agona (strain SL483) GN=nudC
PE=3 SV=1
Length = 257
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E + P++ + V I ++++L+ Q + NG + AG VE GETLE+AV RE
Sbjct: 121 ERYYPQIAPCII-----VAIRREDSILLAQHVRHR-NGVHTVLAGFVEVGETLEQAVARE 174
Query: 115 VLEETGLEM 123
V+EE+G+++
Sbjct: 175 VMEESGIKV 183
>sp|B5BJR5|NUDC_SALPK NADH pyrophosphatase OS=Salmonella paratyphi A (strain AKU_12601)
GN=nudC PE=3 SV=1
Length = 257
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 55 ESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKRE 114
E + P++ + V I ++++L+ Q + NG + AG VE GETLE+AV RE
Sbjct: 121 ERYYPQIAPCII-----VAIRREDSILLAQHVRHR-NGVHTVLAGFVEVGETLEQAVARE 174
Query: 115 VLEETGLEM 123
V+EE+G+++
Sbjct: 175 VMEESGIKV 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,822,867
Number of Sequences: 539616
Number of extensions: 1779756
Number of successful extensions: 5887
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 5302
Number of HSP's gapped (non-prelim): 627
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)