Query psy10892
Match_columns 135
No_of_seqs 146 out of 1494
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 21:08:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fsp_A A/G-specific adenine gl 99.8 7.5E-22 2.6E-26 157.8 4.5 127 3-130 175-304 (369)
2 3gg6_A Nudix motif 18, nucleos 99.7 5.1E-18 1.7E-22 119.0 9.0 71 63-133 17-87 (156)
3 3grn_A MUTT related protein; s 99.7 1.5E-17 5.3E-22 116.3 11.0 71 63-133 5-77 (153)
4 4dyw_A MUTT/nudix family prote 99.7 3.9E-17 1.3E-21 115.2 10.4 68 65-133 28-95 (157)
5 3id9_A MUTT/nudix family prote 99.7 2.8E-17 9.6E-22 116.9 9.5 85 31-133 3-87 (171)
6 3gwy_A Putative CTP pyrophosph 99.7 4.8E-17 1.6E-21 112.2 9.9 67 66-133 6-75 (140)
7 3exq_A Nudix family hydrolase; 99.7 2.1E-17 7.1E-22 117.1 8.1 69 65-133 9-78 (161)
8 3q93_A 7,8-dihydro-8-oxoguanin 99.7 5.8E-17 2E-21 116.7 10.5 69 65-133 23-91 (176)
9 1nqz_A COA pyrophosphatase (MU 99.7 3.6E-17 1.2E-21 118.9 8.6 97 36-132 3-104 (194)
10 3shd_A Phosphatase NUDJ; nudix 99.7 7.9E-17 2.7E-21 112.4 9.4 65 67-133 6-70 (153)
11 3oga_A Nucleoside triphosphata 99.7 8.4E-17 2.9E-21 113.8 9.5 67 65-131 26-94 (165)
12 3r03_A Nudix hydrolase; struct 99.7 7.9E-17 2.7E-21 111.0 9.1 68 64-131 6-74 (144)
13 1sjy_A MUTT/nudix family prote 99.7 1.1E-16 3.7E-21 112.0 9.9 70 64-133 11-84 (159)
14 3i7u_A AP4A hydrolase; nudix p 99.7 5.5E-17 1.9E-21 112.3 8.2 62 66-132 4-65 (134)
15 1rya_A GDP-mannose mannosyl hy 99.7 1.3E-16 4.5E-21 111.7 10.3 68 65-132 17-86 (160)
16 3cng_A Nudix hydrolase; struct 99.7 3.2E-16 1.1E-20 113.9 11.6 67 66-133 40-106 (189)
17 3ees_A Probable pyrophosphohyd 99.7 1.7E-16 5.7E-21 110.1 9.5 67 66-132 21-88 (153)
18 3hhj_A Mutator MUTT protein; n 99.7 1.2E-16 4.2E-21 112.2 8.4 68 64-131 27-95 (158)
19 2w4e_A MUTT/nudix family prote 99.7 1E-16 3.5E-21 111.7 7.7 64 66-129 5-69 (145)
20 2rrk_A ORF135, CTP pyrophospho 99.7 2.9E-16 9.9E-21 107.6 9.1 63 70-132 12-75 (140)
21 3eds_A MUTT/nudix family prote 99.7 8.8E-17 3E-21 112.8 6.5 64 65-132 20-83 (153)
22 1vcd_A NDX1; nudix protein, di 99.7 2.5E-16 8.5E-21 106.2 8.5 62 67-132 3-64 (126)
23 2fb1_A Conserved hypothetical 99.7 2.9E-16 9.9E-21 117.7 9.5 69 65-133 12-83 (226)
24 3f6a_A Hydrolase, nudix family 99.7 1.4E-16 4.9E-21 112.1 7.4 61 65-129 5-65 (159)
25 2b0v_A Nudix hydrolase; struct 99.7 2.8E-16 9.7E-21 109.2 8.7 61 72-132 13-73 (153)
26 3u53_A BIS(5'-nucleosyl)-tetra 99.7 3.5E-16 1.2E-20 109.9 9.3 55 75-131 21-75 (155)
27 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 5.8E-16 2E-20 106.5 9.8 68 65-134 8-79 (139)
28 2pbt_A AP4A hydrolase; nudix p 99.7 3.5E-16 1.2E-20 106.4 8.2 62 66-132 4-65 (134)
29 3i9x_A MUTT/nudix family prote 99.6 5.9E-16 2E-20 112.1 9.4 57 77-133 45-108 (187)
30 2o1c_A DATP pyrophosphohydrola 99.6 8.9E-16 3.1E-20 105.9 9.4 60 65-126 8-68 (150)
31 3gz5_A MUTT/nudix family prote 99.6 6E-16 2.1E-20 117.0 8.8 69 65-133 21-94 (240)
32 3f13_A Putative nudix hydrolas 99.6 5.8E-16 2E-20 110.6 8.2 63 67-133 16-78 (163)
33 2kdv_A RNA pyrophosphohydrolas 99.6 1.4E-15 4.9E-20 108.2 10.0 65 64-131 6-70 (164)
34 2fkb_A Putative nudix hydrolas 99.6 1.6E-15 5.6E-20 108.5 10.2 70 63-132 34-106 (180)
35 2b06_A MUTT/nudix family prote 99.6 5.4E-16 1.8E-20 108.3 7.3 67 65-133 7-77 (155)
36 1f3y_A Diadenosine 5',5'''-P1, 99.6 7.3E-16 2.5E-20 108.1 7.9 59 64-124 12-70 (165)
37 3son_A Hypothetical nudix hydr 99.6 1.8E-15 6.3E-20 105.1 9.6 49 75-126 17-65 (149)
38 2yvp_A NDX2, MUTT/nudix family 99.6 4.9E-16 1.7E-20 111.7 6.9 65 66-130 41-106 (182)
39 3h95_A Nucleoside diphosphate- 99.6 1.3E-15 4.4E-20 111.5 9.3 66 66-132 26-92 (199)
40 1q27_A Putative nudix hydrolas 99.6 8.7E-16 3E-20 109.1 8.1 67 66-132 34-103 (171)
41 1ktg_A Diadenosine tetraphosph 99.6 1.1E-15 3.9E-20 104.5 8.3 61 67-129 4-67 (138)
42 1hzt_A Isopentenyl diphosphate 99.6 1.1E-15 3.7E-20 110.8 8.4 65 65-129 31-99 (190)
43 3q1p_A Phosphohydrolase (MUTT/ 99.6 1.4E-15 4.8E-20 112.1 9.0 64 66-133 68-131 (205)
44 2fvv_A Diphosphoinositol polyp 99.6 1.9E-15 6.4E-20 110.8 9.4 65 67-133 41-107 (194)
45 3fk9_A Mutator MUTT protein; s 99.6 2.3E-15 7.9E-20 109.5 9.6 62 68-133 6-67 (188)
46 2azw_A MUTT/nudix family prote 99.6 1.6E-15 5.4E-20 104.7 7.9 64 65-132 17-81 (148)
47 1mut_A MUTT, nucleoside tripho 99.6 1.3E-16 4.4E-21 107.8 2.0 61 70-130 8-69 (129)
48 1v8y_A ADP-ribose pyrophosphat 99.6 2.2E-15 7.6E-20 107.3 8.1 63 67-131 35-98 (170)
49 1k2e_A Nudix homolog; nudix/MU 99.6 7.7E-16 2.6E-20 108.3 5.6 57 68-128 3-59 (156)
50 2pqv_A MUTT/nudix family prote 99.6 3.9E-15 1.3E-19 104.0 8.8 63 64-132 17-79 (154)
51 3fcm_A Hydrolase, nudix family 99.6 4.3E-15 1.5E-19 108.4 9.4 57 63-122 42-99 (197)
52 1vk6_A NADH pyrophosphatase; 1 99.6 5.3E-15 1.8E-19 113.9 10.1 60 72-132 145-204 (269)
53 1vhz_A ADP compounds hydrolase 99.6 3.9E-15 1.3E-19 109.3 8.9 64 68-132 51-115 (198)
54 1x51_A A/G-specific adenine DN 99.6 3.1E-15 1E-19 104.8 7.6 73 57-129 10-88 (155)
55 3o8s_A Nudix hydrolase, ADP-ri 99.6 4.4E-15 1.5E-19 109.4 8.6 64 65-133 69-132 (206)
56 1mk1_A ADPR pyrophosphatase; n 99.6 4.8E-15 1.6E-19 109.2 7.9 65 67-131 44-110 (207)
57 1g0s_A Hypothetical 23.7 kDa p 99.6 1.4E-14 4.7E-19 107.2 9.6 65 67-131 58-129 (209)
58 3e57_A Uncharacterized protein 99.6 2.4E-15 8.1E-20 112.2 5.0 71 64-134 65-146 (211)
59 2jvb_A Protein PSU1, mRNA-deca 99.6 2.8E-15 9.4E-20 103.7 4.9 55 68-125 6-61 (146)
60 3o6z_A GDP-mannose pyrophospha 99.5 1.5E-14 5.2E-19 105.4 8.4 64 67-131 46-117 (191)
61 2fml_A MUTT/nudix family prote 99.5 4.6E-14 1.6E-18 108.4 10.8 67 66-132 39-110 (273)
62 2qjo_A Bifunctional NMN adenyl 99.5 2.1E-14 7.3E-19 111.9 8.8 61 65-126 202-262 (341)
63 2qjt_B Nicotinamide-nucleotide 99.5 2.2E-14 7.6E-19 112.5 8.8 60 65-125 207-266 (352)
64 2a6t_A SPAC19A8.12; alpha/beta 99.5 2.4E-14 8.3E-19 110.1 7.2 57 67-125 102-159 (271)
65 3q91_A Uridine diphosphate glu 99.5 7.8E-14 2.7E-18 104.3 7.5 66 66-131 36-137 (218)
66 2dsc_A ADP-sugar pyrophosphata 99.5 1.3E-13 4.5E-18 101.8 7.7 52 78-129 77-129 (212)
67 1u20_A U8 snoRNA-binding prote 99.4 1.3E-13 4.6E-18 102.1 6.1 50 73-126 51-101 (212)
68 2dho_A Isopentenyl-diphosphate 99.4 1.5E-12 5E-17 98.3 9.7 62 63-124 56-129 (235)
69 3fjy_A Probable MUTT1 protein; 99.4 4.8E-13 1.6E-17 106.1 6.9 56 75-133 35-90 (364)
70 2pny_A Isopentenyl-diphosphate 99.4 1.4E-12 4.8E-17 99.1 8.3 62 63-124 67-140 (246)
71 3dup_A MUTT/nudix family prote 99.3 1.1E-11 3.6E-16 96.8 8.6 64 62-125 114-183 (300)
72 3qsj_A Nudix hydrolase; struct 99.2 7.7E-12 2.6E-16 94.4 5.6 61 65-125 7-93 (232)
73 1q33_A Pyrophosphatase, ADP-ri 99.2 1.9E-11 6.6E-16 94.8 7.6 42 79-123 140-181 (292)
74 2xsq_A U8 snoRNA-decapping enz 99.2 1.6E-11 5.4E-16 91.6 4.8 43 79-125 66-109 (217)
75 3bho_A Cleavage and polyadenyl 99.2 1.2E-10 4.2E-15 86.1 9.3 50 68-121 61-112 (208)
76 3kvh_A Protein syndesmos; NUDT 99.0 1.3E-10 4.4E-15 85.5 3.1 41 91-131 53-95 (214)
77 3rh7_A Hypothetical oxidoreduc 98.9 3E-09 1E-13 83.6 6.1 59 67-134 184-243 (321)
78 3n5n_X A/G-specific adenine DN 91.1 0.017 5.8E-07 44.5 -2.1 52 2-53 185-236 (287)
79 1kg2_A A/G-specific adenine gl 89.8 0.025 8.6E-07 41.7 -2.1 53 2-54 165-217 (225)
80 1kea_A Possible G-T mismatches 88.9 0.041 1.4E-06 40.5 -1.6 47 3-49 171-217 (221)
81 2abk_A Endonuclease III; DNA-r 80.3 0.4 1.4E-05 34.8 0.4 44 4-47 162-205 (211)
82 1orn_A Endonuclease III; DNA r 69.5 0.68 2.3E-05 34.0 -0.8 46 5-50 168-213 (226)
83 4efo_A Serine/threonine-protei 25.1 86 0.0029 19.7 3.6 30 100-130 29-58 (94)
84 1wj7_A Hypothetical protein (R 22.1 12 0.00043 24.2 -0.9 29 3-31 26-54 (104)
No 1
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.84 E-value=7.5e-22 Score=157.79 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=107.8
Q ss_pred cccccccccccccchhhHHHhhCCCcccCCCCCCCCCccccccccccCCCCC--CccccccCCcccEEEEEEEEcCCCeE
Q psy10892 3 RYSKNIMANHEAIITPVLENIFSGKVCHDGEDQCDYDLTEQADFAPARGVIP--ESFVPRLKKTVTYIVMAVIINSKNAV 80 (135)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~c~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~~v~~~i~~~~~~v 80 (135)
.+++.+++.......+++.+.+|...|.+..|.|+.|+....|.+...+.+. |...++.......++++++.+++++|
T Consensus 175 ~~~~~~~p~~~~~~~~~~l~~~G~~~C~~~~P~C~~Cpl~~~C~~~~~~~~~~~PvK~~kk~~~~~~~~~~vi~~~~g~v 254 (369)
T 3fsp_A 175 QIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRV 254 (369)
T ss_dssp HHHHHHCCSSSHHHHHHHHHHHHHHTSCSSSCCTTTCTTGGGCHHHHHTCGGGCSCCCCCCCCEEEEEEEEEEECSSSEE
T ss_pred HHHHHhCChhhHHHHHHHHHHHHHHhcCCCCCCCCCCCChhhhHHHhcCCcccCCccccccCcceEEEEEEEEEeCCCEE
Confidence 4556777888889999999999999999999999999999999998888755 44555555566667777788888999
Q ss_pred EEEEeec-CCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEE
Q psy10892 81 LMMQEAK-SICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLA 130 (135)
Q Consensus 81 LL~~r~~-~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~ 130 (135)
||+||.. +.|+|.|+||||++++| ++++|+.||++||+|+.+...++++
T Consensus 255 LL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~ 304 (369)
T 3fsp_A 255 LIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIV 304 (369)
T ss_dssp EEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCC
T ss_pred EEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccc
Confidence 9999975 46899999999999999 9999999999999999887665444
No 2
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.75 E-value=5.1e-18 Score=118.97 Aligned_cols=71 Identities=55% Similarity=0.965 Sum_probs=62.6
Q ss_pred CcccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 63 KTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 63 ~~~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.....++++++++++++|||++|.+.+++|.|+||||++++||++++||.||++||||+.+...+++++..
T Consensus 17 ~~~~~~v~~~i~~~~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~ 87 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEE 87 (156)
T ss_dssp TTCEEEEEEECBCTTSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEE
T ss_pred CceEEEEEEEEEeCCCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEc
Confidence 34556777778888899999999876678999999999999999999999999999999999888888754
No 3
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.74 E-value=1.5e-17 Score=116.30 Aligned_cols=71 Identities=38% Similarity=0.600 Sum_probs=61.9
Q ss_pred CcccEEEEEEEEcCCCeEEEEEeec--CCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 63 KTVTYIVMAVIINSKNAVLMMQEAK--SICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 63 ~~~~~~v~~~i~~~~~~vLL~~r~~--~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.+.+..+++++++.+++|||++|.. ..++|.|+||||++++||++.+||.||++||||+.+...+++++..
T Consensus 5 ~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~ 77 (153)
T 3grn_A 5 KPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVN 77 (153)
T ss_dssp SCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEE
T ss_pred CceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEE
Confidence 3456677788888888999999985 4578999999999999999999999999999999999888887653
No 4
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.72 E-value=3.9e-17 Score=115.20 Aligned_cols=68 Identities=34% Similarity=0.486 Sum_probs=58.9
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.+..+++++++ +++|||++|.+.+++|.|+||||++++||++.+||.||++||||+.+...+++++..
T Consensus 28 ~~~~v~~vi~~-~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 95 (157)
T 4dyw_A 28 PRVGCGAAIVR-DGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVVD 95 (157)
T ss_dssp CEEEEEEEEEE-TTEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEEE
T ss_pred ceeEEEEEEEE-CCEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEEE
Confidence 45566666766 689999999876678999999999999999999999999999999999888887654
No 5
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.72 E-value=2.8e-17 Score=116.92 Aligned_cols=85 Identities=35% Similarity=0.547 Sum_probs=55.5
Q ss_pred CCCCCCCCCccccccccccCCCCCCccccccCCcccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHH
Q psy10892 31 DGEDQCDYDLTEQADFAPARGVIPESFVPRLKKTVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEA 110 (135)
Q Consensus 31 ~~~~~c~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~a 110 (135)
+..+.|.+|+....|. .......+++++++ +++|||++|... +|.|+||||++++||++++|
T Consensus 3 ~~~~~~~~~~~~~~~~---------------~~~~~~~v~~ii~~-~~~vLL~~r~~~--~~~w~~PgG~ve~gEs~~~a 64 (171)
T 3id9_A 3 LEGFICKFNRKRRLYI---------------ENIMQVRVTGILIE-DEKVLLVKQKVA--NRDWSLPGGRVENGETLEEA 64 (171)
T ss_dssp ----------------------------------CEEEEEEEEEE-TTEEEEEECSST--TCCEECCEEECCTTCCHHHH
T ss_pred ccccccccChhhhhcc---------------CCceEEEEEEEEEE-CCEEEEEEEECC--CCeEECCCccCCCCCCHHHH
Confidence 4456777776644331 12244455565655 479999998764 68999999999999999999
Q ss_pred HHHHHHHHHCCccccceEEEEEe
Q psy10892 111 VKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 111 a~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
|+||++||||+.+...+++++..
T Consensus 65 a~REl~EEtGl~~~~~~~~~~~~ 87 (171)
T 3id9_A 65 MIREMREETGLEVKIKKLLYVCD 87 (171)
T ss_dssp HHHHHHHHHCCCEEEEEEEEEEE
T ss_pred HHHHHHHHHCCccccceEEEEEc
Confidence 99999999999998888877764
No 6
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.71 E-value=4.8e-17 Score=112.22 Aligned_cols=67 Identities=33% Similarity=0.422 Sum_probs=52.5
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCC---CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSI---CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~---~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
..++++++.+ +++|||+||.... ++|.|+||||++++||++.+||.||++||||+.+...+++++..
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~ 75 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVH 75 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEE
Confidence 3345555555 6899999997644 78999999999999999999999999999999998888877654
No 7
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.71 E-value=2.1e-17 Score=117.06 Aligned_cols=69 Identities=29% Similarity=0.445 Sum_probs=60.2
Q ss_pred ccEEEEEEEEcCC-CeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVIINSK-NAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~~~~-~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.+.++.+++++++ ++|||++|.+..|.|.|+||||++++||++.+||.||++||||+.+...+++++..
T Consensus 9 ~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 78 (161)
T 3exq_A 9 VELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCE 78 (161)
T ss_dssp EEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEE
T ss_pred ceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEe
Confidence 5556667777766 69999999877788889999999999999999999999999999999888888754
No 8
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.71 E-value=5.8e-17 Score=116.71 Aligned_cols=69 Identities=28% Similarity=0.447 Sum_probs=59.4
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.+.++++++++++++|||++|.+..++|.|+||||++++||++++||.||++||||+.+...++++...
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~ 91 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIV 91 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEE
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEE
Confidence 444555666677789999999776678999999999999999999999999999999999888887653
No 9
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.70 E-value=3.6e-17 Score=118.90 Aligned_cols=97 Identities=22% Similarity=0.214 Sum_probs=64.6
Q ss_pred CCCCccccccccccCCCCCCcccc-ccCCcccEEEEEEEEcCCC--eEEEEEeec--CCCCCeEEeeeEecCCCCCHHHH
Q psy10892 36 CDYDLTEQADFAPARGVIPESFVP-RLKKTVTYIVMAVIINSKN--AVLMMQEAK--SICNGAWYLPAGKVEEGETLEEA 110 (135)
Q Consensus 36 c~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~v~~~i~~~~~--~vLL~~r~~--~~~~g~w~~PgG~i~~gEs~~~a 110 (135)
++-++.+..|.+...+......+. .........+++++++.++ +|||++|.+ ..++|.|+||||++++||++++|
T Consensus 3 ~p~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~a 82 (194)
T 1nqz_A 3 APHDPLDDIQADPWALWLSGRTRTALELPHYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQA 82 (194)
T ss_dssp -CCCHHHHHHTCTTCCCBCC----------CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHH
T ss_pred CCCCcCCHHHHHHHHHHHhhcChhhccCCCCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHH
Confidence 344556667776666654322111 1112233444455557666 899999875 34689999999999999999999
Q ss_pred HHHHHHHHHCCccccceEEEEE
Q psy10892 111 VKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 111 a~REl~EE~Gl~~~~~~~~~~~ 132 (135)
|.||++||||+++...++++..
T Consensus 83 a~REl~EEtGl~~~~~~~l~~~ 104 (194)
T 1nqz_A 83 ALREAQEEVALDPAAVTLLGEL 104 (194)
T ss_dssp HHHHHHHHHCCCGGGCEEEEEC
T ss_pred HHHHHHHHHCCCccceEEEEEc
Confidence 9999999999999888877654
No 10
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.70 E-value=7.9e-17 Score=112.39 Aligned_cols=65 Identities=31% Similarity=0.549 Sum_probs=54.3
Q ss_pred EEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 67 YIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 67 ~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.++++ ++++++++||++|. ...+|.|.||||++++|||+++||.||++||||+++...+++++..
T Consensus 6 ~~v~~-ii~~~~~vLl~~r~-~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 70 (153)
T 3shd_A 6 VTVAC-VVHAEGKFLVVEET-INGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQ 70 (153)
T ss_dssp EEEEE-EEEETTEEEEEEEE-ETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_pred eEEEE-EEEeCCEEEEEEec-CCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEE
Confidence 33444 44556899999987 3346899999999999999999999999999999999988888763
No 11
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.70 E-value=8.4e-17 Score=113.82 Aligned_cols=67 Identities=28% Similarity=0.506 Sum_probs=53.0
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecC--CCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKS--ICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~--~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
.+..+++++++.+++|||++|... .++|.|+||||++++||++++||.||++||||+.+...+++++
T Consensus 26 ~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~ 94 (165)
T 3oga_A 26 RQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPW 94 (165)
T ss_dssp EEEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred ceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeee
Confidence 344455556666789999998743 5789999999999999999999999999999999987776653
No 12
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.70 E-value=7.9e-17 Score=111.04 Aligned_cols=68 Identities=32% Similarity=0.561 Sum_probs=57.7
Q ss_pred cccEEEEEEEEcCCCeEEEEEeec-CCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEAK-SICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~~-~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
....++++++++.+++|||+||.. +.++|.|+||||++++||++.+||.||++||||+.+...++..+
T Consensus 6 ~~~~~~~~vi~~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~ 74 (144)
T 3r03_A 6 PILLVTAAALIDPDGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPL 74 (144)
T ss_dssp CEEEEEEEEEBCTTSCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred ceeEEEEEEEEcCCCEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEE
Confidence 345566777788888999999974 55889999999999999999999999999999999988754444
No 13
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.69 E-value=1.1e-16 Score=112.05 Aligned_cols=70 Identities=33% Similarity=0.548 Sum_probs=59.0
Q ss_pred cccEEEEEEEEcCCCeEEEEEeec----CCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEAK----SICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~~----~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
..+..++++++++++++||++|.. ..++|.|+||||++++||++.+||.||++||||+.+...++++...
T Consensus 11 ~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~ 84 (159)
T 1sjy_A 11 VELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYL 84 (159)
T ss_dssp CCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEE
T ss_pred eEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEe
Confidence 345566777788788999999874 3367999999999999999999999999999999998877777654
No 14
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.69 E-value=5.5e-17 Score=112.32 Aligned_cols=62 Identities=29% Similarity=0.516 Sum_probs=51.7
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
..++++++++ +++|||+||. .|.|.||||++++|||+.+||.||++||||+.+...++++..
T Consensus 4 ~~aag~vv~~-~~~vLL~~r~----~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~ 65 (134)
T 3i7u_A 4 EFSAGGVLFK-DGEVLLIKTP----SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEI 65 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECT----TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred EEEEEEEEEE-CCEEEEEEeC----CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeee
Confidence 3455566665 4799999875 378999999999999999999999999999999887777653
No 15
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.69 E-value=1.3e-16 Score=111.70 Aligned_cols=68 Identities=26% Similarity=0.475 Sum_probs=57.7
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccc--cceEEEEE
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMA--PTTLLAVE 132 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~--~~~~~~~~ 132 (135)
....+++++++.+++|||++|.+.+++|.|+||||++++||++.+||.||++||||+.+. ..+++++.
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~ 86 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVW 86 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEE
T ss_pred cEEEEEEEEEcCCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEE
Confidence 445677788887889999999876678999999999999999999999999999999864 45666554
No 16
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.68 E-value=3.2e-16 Score=113.87 Aligned_cols=67 Identities=36% Similarity=0.456 Sum_probs=56.5
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
..++++++++ +++|||++|.+.+..|.|+||||++++||++++||+||++||||+.+....++++..
T Consensus 40 ~~~v~~ii~~-~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 106 (189)
T 3cng_A 40 KVIVGCIPEW-ENKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVYS 106 (189)
T ss_dssp EEEEEEEEEE-TTEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_pred ceEEEEEEEe-CCEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEEe
Confidence 3455666666 679999999876567899999999999999999999999999999988777777643
No 17
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.68 E-value=1.7e-16 Score=110.11 Aligned_cols=67 Identities=34% Similarity=0.479 Sum_probs=57.2
Q ss_pred cEEEEEEEEcCCCeEEEEEeec-CCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAK-SICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~-~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
+..+++++++.+++|||++|.. +.++|.|+||||++++||++.+||.||+.||||+.+....++++.
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~ 88 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLAC 88 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEE
T ss_pred eEEEEEEEEEECCEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEE
Confidence 4455556667778999999975 467899999999999999999999999999999999888877664
No 18
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.68 E-value=1.2e-16 Score=112.21 Aligned_cols=68 Identities=32% Similarity=0.591 Sum_probs=57.5
Q ss_pred cccEEEEEEEEcCCCeEEEEEee-cCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEA-KSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~-~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
....++++++++.+++|||++|. .+.++|.|+||||++++||++.+||.||++||||+.+...++..+
T Consensus 27 ~~~~~~~~~i~~~~~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 95 (158)
T 3hhj_A 27 SLLIVVACALLDQDNRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPL 95 (158)
T ss_dssp CEEEEEEEEEBCTTSEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred ceEEEEEEEEEeCCCEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEE
Confidence 34556667777888999999987 456889999999999999999999999999999999988765433
No 19
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.68 E-value=1e-16 Score=111.68 Aligned_cols=64 Identities=25% Similarity=0.301 Sum_probs=52.2
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCC-CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEE
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSI-CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~-~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~ 129 (135)
+.+++++++++++++||+++.+.+ .++.|+||||++++|||+++||.||++||||+.+...+.+
T Consensus 5 ~~~v~vi~~~~~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l 69 (145)
T 2w4e_A 5 PRAVFILPVTAQGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPL 69 (145)
T ss_dssp CEEEEEEEEETTSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEEC
T ss_pred CCEEEEEEEcCCCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEE
Confidence 346677778888899888765433 4569999999999999999999999999999988755444
No 20
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.67 E-value=2.9e-16 Score=107.57 Aligned_cols=63 Identities=33% Similarity=0.491 Sum_probs=53.2
Q ss_pred EEEEEcCCCeEEEEEeec-CCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 70 MAVIINSKNAVLMMQEAK-SICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 70 ~~~i~~~~~~vLL~~r~~-~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
++++++++++|||++|.. ..++|.|+||||++++||++++||.||++||||+.+...++++..
T Consensus 12 ~~~ii~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~ 75 (140)
T 2rrk_A 12 VAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASH 75 (140)
T ss_dssp EEEEEEETTEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEE
T ss_pred EEEEEEcCCEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEE
Confidence 334446678999999864 457899999999999999999999999999999999877777654
No 21
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.67 E-value=8.8e-17 Score=112.82 Aligned_cols=64 Identities=44% Similarity=0.511 Sum_probs=54.2
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
.+.++++++++.+++|||++|. +|.|+||||++++||++.+||.||++||||+.+...+++++.
T Consensus 20 ~~~~v~~ii~~~~~~vLL~~r~----~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 83 (153)
T 3eds_A 20 FXPSVAAVIKNEQGEILFQYPG----GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVF 83 (153)
T ss_dssp EEEEEEEEEBCTTCCEEEECC-------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEE
T ss_pred EeeeEEEEEEcCCCeEEEEEcC----CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEe
Confidence 4556677777888899998887 589999999999999999999999999999999888888764
No 22
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.66 E-value=2.5e-16 Score=106.25 Aligned_cols=62 Identities=39% Similarity=0.562 Sum_probs=54.6
Q ss_pred EEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 67 YIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 67 ~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
..++++++++++++||+||++ |.|+||||++++||++.+||.||++||||+.+...++++..
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~----g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~ 64 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM----GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPT 64 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT----SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCEEEEEEECC----CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEE
Confidence 456778888888999999864 78999999999999999999999999999999887777664
No 23
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.66 E-value=2.9e-16 Score=117.71 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=58.6
Q ss_pred ccEEEEEEEE---cCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVII---NSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~---~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
....++++|+ +++++|||++|...+++|.|.+|||++++|||+++||.||++||||+.+...+.+++..
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~~ 83 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAFG 83 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEEC
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEeC
Confidence 4556666666 55679999999876778999999999999999999999999999999998777777653
No 24
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.66 E-value=1.4e-16 Score=112.12 Aligned_cols=61 Identities=30% Similarity=0.345 Sum_probs=52.2
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEE
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~ 129 (135)
.+.++++++++ +++|||++|++ +|.|.||||++++|||+.+||+||++||||+.+...+++
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~---~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~ 65 (159)
T 3f6a_A 5 RHFTVSVFIVC-KDKVLLHLHKK---AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPI 65 (159)
T ss_dssp SCEEEEEEEEE-TTEEEEEECSS---SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCC
T ss_pred ceEEEEEEEEE-CCEEEEEEcCC---CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccc
Confidence 45566777777 57999999875 589999999999999999999999999999988765544
No 25
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.66 E-value=2.8e-16 Score=109.25 Aligned_cols=61 Identities=33% Similarity=0.480 Sum_probs=51.8
Q ss_pred EEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 72 VIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 72 ~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
+++.++++|||++|.+...+|.|+||||++++||++++||.||++||||+.+...+++++.
T Consensus 13 ~ii~~~~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 73 (153)
T 2b0v_A 13 AVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIY 73 (153)
T ss_dssp EECEETTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEE
Confidence 3344568999999875433789999999999999999999999999999999888877765
No 26
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.66 E-value=3.5e-16 Score=109.91 Aligned_cols=55 Identities=33% Similarity=0.474 Sum_probs=47.9
Q ss_pred cCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 75 NSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 75 ~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
+++.++||+||+++ +|.|.||||++++|||+.+||.||++||||+.+....+++.
T Consensus 21 n~~~e~LL~~r~~~--~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~ 75 (155)
T 3u53_A 21 NNAIEFLLLQASDG--IHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEG 75 (155)
T ss_dssp SCSEEEEEEEESSS--SCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred CCCcEEEEEEecCC--CCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeee
Confidence 45568999999765 47899999999999999999999999999999887766654
No 27
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.66 E-value=5.8e-16 Score=106.50 Aligned_cols=68 Identities=32% Similarity=0.397 Sum_probs=54.8
Q ss_pred ccEEEEEEEEc--CCCe--EEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEeC
Q psy10892 65 VTYIVMAVIIN--SKNA--VLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVETA 134 (135)
Q Consensus 65 ~~~~v~~~i~~--~~~~--vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~~ 134 (135)
....+++++++ ++++ +||++|.+.+ +.|+||||++++|||+++||.||++||||+.+...+++++.+.
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~~--~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~ 79 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYPP--VGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSD 79 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSSS--CSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECC
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCCC--CcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECC
Confidence 34455566655 5677 9999987643 3499999999999999999999999999999988888777653
No 28
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.65 E-value=3.5e-16 Score=106.40 Aligned_cols=62 Identities=29% Similarity=0.512 Sum_probs=53.0
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
..++++++++ +++|||++|.+ |.|+||||++++|||+.+||.||++||||+.+...++++..
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~----~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~ 65 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS----NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEI 65 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT----SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC----CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEE
Confidence 3455666666 46999999865 89999999999999999999999999999999887777664
No 29
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.65 E-value=5.9e-16 Score=112.08 Aligned_cols=57 Identities=32% Similarity=0.522 Sum_probs=50.7
Q ss_pred CCeEEEEEee-------cCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 77 KNAVLMMQEA-------KSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 77 ~~~vLL~~r~-------~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
+++|||++|. ...++|.|.||||++++||++++||+||++||||+++...+++++..
T Consensus 45 ~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~ 108 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVFD 108 (187)
T ss_dssp EEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEEC
T ss_pred CCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEEEEEc
Confidence 3589999994 34678999999999999999999999999999999999888888754
No 30
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.64 E-value=8.9e-16 Score=105.92 Aligned_cols=60 Identities=33% Similarity=0.483 Sum_probs=51.3
Q ss_pred ccEEEEEEEEcCC-CeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccc
Q psy10892 65 VTYIVMAVIINSK-NAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPT 126 (135)
Q Consensus 65 ~~~~v~~~i~~~~-~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~ 126 (135)
.+..+.+++++.+ +++||++|+.. +|.|+||||++++||++.+||.||++||||+.+...
T Consensus 8 ~~~~v~~~i~~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~ 68 (150)
T 2o1c_A 8 RPVSILVVIYAQDTKRVLMLQRRDD--PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAE 68 (150)
T ss_dssp CSEEEEEEEEETTTCEEEEEECSSS--TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHH
T ss_pred CceEEEEEEEeCCCCEEEEEEecCC--CCceECCccccCCCCCHHHHHHHHHHHHhCCCcccc
Confidence 3356777777764 89999998765 689999999999999999999999999999988763
No 31
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.64 E-value=6e-16 Score=117.00 Aligned_cols=69 Identities=29% Similarity=0.399 Sum_probs=57.7
Q ss_pred ccEEEEEEEE---cCCCeEEEEEeecCCCCCeEEeeeEecCC--CCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVII---NSKNAVLMMQEAKSICNGAWYLPAGKVEE--GETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~---~~~~~vLL~~r~~~~~~g~w~~PgG~i~~--gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
..+.+.++|+ +++++|||++|.+.+++|.|.+|||++++ |||+++||.||++||||+++...+.+++..
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~ 94 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVG 94 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeC
Confidence 3455556655 44569999999877778999999999999 999999999999999999998777777654
No 32
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.64 E-value=5.8e-16 Score=110.64 Aligned_cols=63 Identities=32% Similarity=0.441 Sum_probs=50.5
Q ss_pred EEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 67 YIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 67 ~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
..++++++..++++||++|+ +|.|.||||++++|||+++||.||++||||+.+...+.++...
T Consensus 16 ~~~~~~ii~~~~~vLL~~r~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~ 78 (163)
T 3f13_A 16 ARRATAIIEMPDGVLVTASR----GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHI 78 (163)
T ss_dssp EEEEEEECEETTEEEEEECC-------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_pred eEEEEEEEEeCCEEEEEEEC----CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEe
Confidence 34445555566799999886 4899999999999999999999999999999998888777654
No 33
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.64 E-value=1.4e-15 Score=108.25 Aligned_cols=65 Identities=31% Similarity=0.461 Sum_probs=57.1
Q ss_pred cccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
..+..+++++++.+++|||++|.. +|.|.+|||++++|||+++||.||++||||+.+...++++.
T Consensus 6 ~~~~~v~~~i~~~~~~vLl~~r~~---~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~ 70 (164)
T 2kdv_A 6 GYRPNVGIVICNRQGQVMWARRFG---QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILAS 70 (164)
T ss_dssp SEEEEEEEEEECTTSEEEEEEETT---CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred CCCcEEEEEEEccCCEEEEEEEcC---CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEE
Confidence 356677888888889999998865 58999999999999999999999999999999988777765
No 34
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.63 E-value=1.6e-15 Score=108.53 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=58.0
Q ss_pred CcccEEEEEEEEcCCCeEEEEEeecC--CCCCeEEe-eeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 63 KTVTYIVMAVIINSKNAVLMMQEAKS--ICNGAWYL-PAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 63 ~~~~~~v~~~i~~~~~~vLL~~r~~~--~~~g~w~~-PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
...+.++++++++.+++|||++|... .++|.|+| |||++++||++.+||+||++||||+.+.....++..
T Consensus 34 ~~~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~ 106 (180)
T 2fkb_A 34 CLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQF 106 (180)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEE
T ss_pred CceeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEE
Confidence 34556777788888889999888643 35899999 999999999999999999999999988776666543
No 35
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.63 E-value=5.4e-16 Score=108.32 Aligned_cols=67 Identities=25% Similarity=0.454 Sum_probs=51.9
Q ss_pred ccEEEEEEEEcCCCe----EEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVIINSKNA----VLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~----vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
.+.++++++.++ ++ +||++|....|+| |.||||++++||++++||.||++||||+.+...+++++..
T Consensus 7 ~~~~~~~ii~~~-~~~~~~vLl~~r~~~~~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 77 (155)
T 2b06_A 7 TILTNICLIEDL-ETQRVVMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKN 77 (155)
T ss_dssp EEEEEEEEEEET-TTTEEEEEEEC-----CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEE
T ss_pred cEEEEEEEEEEC-CCCeEEEEEEECCCCCCCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEe
Confidence 455566666664 45 8888887655777 9999999999999999999999999999999888887654
No 36
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.63 E-value=7.3e-16 Score=108.07 Aligned_cols=59 Identities=29% Similarity=0.456 Sum_probs=51.6
Q ss_pred cccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccc
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMA 124 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~ 124 (135)
..+..+++++++.+++|||++|... +|.|++|||++++|||+++||.||++||||+.+.
T Consensus 12 ~~~~~v~~~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 70 (165)
T 1f3y_A 12 GYRRNVGICLMNNDKKIFAASRLDI--PDAWQMPQGGIDEGEDPRNAAIRELREETGVTSA 70 (165)
T ss_dssp SCCCEEEEEEECTTSCEEEEEETTE--EEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSE
T ss_pred ceeeeEEEEEECCCCcEEEEecCCC--CCcEECCeeccCCCCCHHHHHHHHHHHhhCCChh
Confidence 3566677888888899999998743 4899999999999999999999999999999864
No 37
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.63 E-value=1.8e-15 Score=105.09 Aligned_cols=49 Identities=24% Similarity=0.447 Sum_probs=44.4
Q ss_pred cCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccc
Q psy10892 75 NSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPT 126 (135)
Q Consensus 75 ~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~ 126 (135)
+++++|||++|.+. |.|+||||++++|||+.+||.||++||||+++...
T Consensus 17 ~~~~~vLl~~r~~~---g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 65 (149)
T 3son_A 17 EANYQFGVLHRTDA---DVWQFVAGGGEDEEAISETAKRESIEELNLDVDVK 65 (149)
T ss_dssp SSSEEEEEEEESSS---SCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCC
T ss_pred CCCeEEEEEEEcCC---CCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccc
Confidence 56679999998763 89999999999999999999999999999998874
No 38
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.63 E-value=4.9e-16 Score=111.71 Aligned_cols=65 Identities=29% Similarity=0.396 Sum_probs=55.3
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCC-CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEE
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSI-CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLA 130 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~-~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~ 130 (135)
+.++++++++.++++||++|.+.+ ++|.|+||||++++|||+++||.||++||||+.+...++++
T Consensus 41 ~~~v~v~i~~~~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~ 106 (182)
T 2yvp_A 41 VAASFVLPVTERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLP 106 (182)
T ss_dssp CEEEEEEEBCTTSEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECC
T ss_pred CCEEEEEEEcCCCEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEE
Confidence 446777788888899999987533 57899999999999999999999999999999887666554
No 39
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=111.48 Aligned_cols=66 Identities=26% Similarity=0.480 Sum_probs=54.8
Q ss_pred cEEEEEEEEc-CCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 66 TYIVMAVIIN-SKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 66 ~~~v~~~i~~-~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
...+++++++ ++++|||+||+. +++|.|.||||++++||++++||.||++||||+.+...+++++.
T Consensus 26 ~v~v~~~v~~~~~~~vLL~~r~~-~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~ 92 (199)
T 3h95_A 26 QVGVAGAVFDESTRKILVVQDRN-KLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIR 92 (199)
T ss_dssp CCEEEEEEEETTTTEEEEEEESS-SSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred cceEEEEEEeCCCCEEEEEEEcC-CCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEE
Confidence 3445455555 458999999865 35799999999999999999999999999999999888888764
No 40
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.63 E-value=8.7e-16 Score=109.13 Aligned_cols=67 Identities=28% Similarity=0.361 Sum_probs=56.7
Q ss_pred cEEEEEEEEcCCCeEEEEEeecC--CCCCeEE-eeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKS--ICNGAWY-LPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~--~~~g~w~-~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
+.++++++++.++++||++|... .++|.|+ ||||++++|||+.+||.||++||||+.+...++..+.
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~ 103 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLA 103 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEE
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEE
Confidence 66777888888889999998543 3689998 9999999999999999999999999999886544443
No 41
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.62 E-value=1.1e-15 Score=104.50 Aligned_cols=61 Identities=28% Similarity=0.318 Sum_probs=49.1
Q ss_pred EEEEEEEEcC---CCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEE
Q psy10892 67 YIVMAVIINS---KNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129 (135)
Q Consensus 67 ~~v~~~i~~~---~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~ 129 (135)
.+++++++++ +++|||+||+. .+|.|+||||++++||++++||.||++||||+.+...+++
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~--~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~ 67 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASY--PPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIH 67 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESS--TTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEEEecCCCcEEEEEEccC--CCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEe
Confidence 4456666654 36899999873 2579999999999999999999999999999976655443
No 42
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.62 E-value=1.1e-15 Score=110.84 Aligned_cols=65 Identities=26% Similarity=0.430 Sum_probs=55.5
Q ss_pred ccEEEEEEEEcCCCeEEEEEeec--CCCCCeEEe-eeEecCCCCCHHHHHHHHHHHHHCCccccc-eEE
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAK--SICNGAWYL-PAGKVEEGETLEEAVKREVLEETGLEMAPT-TLL 129 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~--~~~~g~w~~-PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~-~~~ 129 (135)
.+.+++++++++++++||++|.. ..++|.|++ |||++++|||+++||.||++||||+.+... .++
T Consensus 31 ~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~ 99 (190)
T 1hzt_A 31 LHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIY 99 (190)
T ss_dssp CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEE
T ss_pred eEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheee
Confidence 44567788888888999999864 346899999 999999999999999999999999998876 444
No 43
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.62 E-value=1.4e-15 Score=112.07 Aligned_cols=64 Identities=34% Similarity=0.550 Sum_probs=53.1
Q ss_pred cEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 66 TYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 66 ~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
...+.+++++ +++|||++|.. +|.|.||||++++|||+.+||.||++||||+.+...+++++..
T Consensus 68 ~~~v~~vv~~-~~~vLLv~r~~---~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~ 131 (205)
T 3q1p_A 68 KVDIRAVVFQ-NEKLLFVKEKS---DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFD 131 (205)
T ss_dssp EEEEEEEEEE-TTEEEEEEC------CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEE
T ss_pred cceEEEEEEE-CCEEEEEEEcC---CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Confidence 3455666666 67999999874 5899999999999999999999999999999999888888764
No 44
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.62 E-value=1.9e-15 Score=110.83 Aligned_cols=65 Identities=25% Similarity=0.393 Sum_probs=53.3
Q ss_pred EEEEEEEE--cCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 67 YIVMAVII--NSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 67 ~~v~~~i~--~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
..++++++ +.+++|||++|.+. +|.|+||||++++||++++||+||++||||+.+...+++++..
T Consensus 41 ~~~~~vi~~~~~~~~vLLv~r~~~--~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~ 107 (194)
T 2fvv_A 41 KRAACLCFRSESEEEVLLVSSSRH--PDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFE 107 (194)
T ss_dssp EEEEEEEESSTTCCEEEEEECSSC--TTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEE
T ss_pred ccEEEEEEEECCCCEEEEEEEeCC--CCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEE
Confidence 33445554 44689999998754 4899999999999999999999999999999998877777653
No 45
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.62 E-value=2.3e-15 Score=109.53 Aligned_cols=62 Identities=34% Similarity=0.673 Sum_probs=52.9
Q ss_pred EEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 68 IVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 68 ~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
++.+++.+ +++|||++|.. +|.|.+|||++++||++++||.||++||||+.+...+++++..
T Consensus 6 v~~~vi~~-~~~vLL~~r~~---~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 67 (188)
T 3fk9_A 6 VTNCIVVD-HDQVLLLQKPR---RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFS 67 (188)
T ss_dssp EEEEEEEE-TTEEEEEECTT---TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEE
T ss_pred EEEEEEEE-CCEEEEEEeCC---CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEE
Confidence 44555555 57999999854 6899999999999999999999999999999999888877754
No 46
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.61 E-value=1.6e-15 Score=104.74 Aligned_cols=64 Identities=36% Similarity=0.639 Sum_probs=53.2
Q ss_pred ccEEEEEEEEcC-CCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 65 VTYIVMAVIINS-KNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 65 ~~~~v~~~i~~~-~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
.+..++++++++ +++|||++|. +|.|+||||++++||++++||.||++||||+.+...++++..
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 81 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP----NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEA 81 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT----TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred eeeEEEEEEECCCCCeEEEEEcC----CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEE
Confidence 344555666665 6899999973 389999999999999999999999999999999887777653
No 47
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.61 E-value=1.3e-16 Score=107.75 Aligned_cols=61 Identities=33% Similarity=0.498 Sum_probs=51.3
Q ss_pred EEEEEcCCCeEEEEEeecC-CCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEE
Q psy10892 70 MAVIINSKNAVLMMQEAKS-ICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLA 130 (135)
Q Consensus 70 ~~~i~~~~~~vLL~~r~~~-~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~ 130 (135)
+++++++++++||+||... .++|.|+||||++++||++.+||.||++||||+.+...++++
T Consensus 8 ~~ii~~~~~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~ 69 (129)
T 1mut_A 8 VGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFE 69 (129)
T ss_dssp CEECEETTTEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCC
T ss_pred EEEEEecCCEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEE
Confidence 3445677789999998754 578999999999999999999999999999999887554443
No 48
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.60 E-value=2.2e-15 Score=107.30 Aligned_cols=63 Identities=29% Similarity=0.405 Sum_probs=52.7
Q ss_pred EEEEEEEEcCCCeEEEEEeecCC-CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 67 YIVMAVIINSKNAVLMMQEAKSI-CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 67 ~~v~~~i~~~~~~vLL~~r~~~~-~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
.++++++++ ++++||+++.+.+ ++|.|+||||++++|||+++||.||++||||+ +...+.++.
T Consensus 35 ~~v~vii~~-~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~ 98 (170)
T 1v8y_A 35 PAVAVIALR-EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFS 98 (170)
T ss_dssp CEEEEEEEE-TTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEE
T ss_pred CeEEEEEEE-CCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEE
Confidence 356667777 7899999886543 68899999999999999999999999999999 776666554
No 49
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.60 E-value=7.7e-16 Score=108.28 Aligned_cols=57 Identities=37% Similarity=0.617 Sum_probs=48.7
Q ss_pred EEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceE
Q psy10892 68 IVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTL 128 (135)
Q Consensus 68 ~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~ 128 (135)
++++++++ +++|||++|.+ +|.|.||||++++|||+++||.||++||||+.+.....
T Consensus 3 ~~~~vi~~-~~~vLL~~r~~---~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~ 59 (156)
T 1k2e_A 3 VTSGVLVE-NGKVLLVKHKR---LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGF 59 (156)
T ss_dssp EEEEECEE-TTEEEEEECTT---TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCC
T ss_pred EEEEEEEE-CCEEEEEEEcC---CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccc
Confidence 45566666 78999999865 58999999999999999999999999999998876543
No 50
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.60 E-value=3.9e-15 Score=103.97 Aligned_cols=63 Identities=29% Similarity=0.447 Sum_probs=52.6
Q ss_pred cccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
..+..+++++++ +++|||++| +|.|.||||++++||++++||.||++||||+.+...+++++.
T Consensus 17 ~~~~~~~~ii~~-~~~vLl~~r-----~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~ 79 (154)
T 2pqv_A 17 VFGVRATALIVQ-NHKLLVTKD-----KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVV 79 (154)
T ss_dssp EEEEEEEECCEE-TTEEEEEEE-----TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred eEeEEEEEEEEE-CCEEEEEec-----CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEE
Confidence 344555666665 579999998 489999999999999999999999999999999877776654
No 51
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.60 E-value=4.3e-15 Score=108.43 Aligned_cols=57 Identities=19% Similarity=0.344 Sum_probs=49.9
Q ss_pred CcccEEEEEEEEcCCC-eEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCc
Q psy10892 63 KTVTYIVMAVIINSKN-AVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLE 122 (135)
Q Consensus 63 ~~~~~~v~~~i~~~~~-~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~ 122 (135)
...+.+++++++++++ +|||++|+. .|.|.||||++++|||+.+||+||++||||+.
T Consensus 42 ~~~h~~~~~vv~~~~~~~vLL~~r~~---~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKERNKFLMIHHNI---YNSWAWTGGHSDNEKDQLKVAIKELKEETGVK 99 (197)
T ss_dssp SSEEEEEEEEEECTTSCEEEEEEETT---TTEEECEEEECTTCCBHHHHHHHHHHHHHCCS
T ss_pred CCccEEEEEEEEECCCCEEEEEEecC---CCCEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 3466777888888765 999999774 58999999999999999999999999999997
No 52
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.59 E-value=5.3e-15 Score=113.87 Aligned_cols=60 Identities=38% Similarity=0.582 Sum_probs=51.8
Q ss_pred EEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 72 VIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 72 ~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
+++..+++|||+||...+ +|.|++|||++++|||+++||.||++||||+++...++++..
T Consensus 145 v~v~~~~~vLL~rr~~~~-~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~ 204 (269)
T 1vk6_A 145 VAIRRDDSILLAQHTRHR-NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 204 (269)
T ss_dssp EEEEETTEEEEEEETTTC-SSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEE
T ss_pred EEEEeCCEEEEEEecCCC-CCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEE
Confidence 344456899999987654 689999999999999999999999999999999888877764
No 53
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.59 E-value=3.9e-15 Score=109.30 Aligned_cols=64 Identities=27% Similarity=0.324 Sum_probs=53.2
Q ss_pred EEEEEEEcCCCeEEEEEeecC-CCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 68 IVMAVIINSKNAVLMMQEAKS-ICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 68 ~v~~~i~~~~~~vLL~~r~~~-~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
++++++++++ +|||+++.+. ..++.|+||||++++||++++||.||++||||+.+...++++..
T Consensus 51 av~vl~~~~~-~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~ 115 (198)
T 1vhz_A 51 AVMIVPIVDD-HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKL 115 (198)
T ss_dssp EEEEEEEETT-EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred EEEEEEEECC-EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEE
Confidence 4556666766 9999987653 35679999999999999999999999999999999877776654
No 54
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.59 E-value=3.1e-15 Score=104.84 Aligned_cols=73 Identities=21% Similarity=0.286 Sum_probs=54.7
Q ss_pred cccccCCcccEEEEEEEEcC---CCeEEEEEeec-CCCCCeEEeeeEecCCCCCHH-HHHHHHHHHHHC-CccccceEE
Q psy10892 57 FVPRLKKTVTYIVMAVIINS---KNAVLMMQEAK-SICNGAWYLPAGKVEEGETLE-EAVKREVLEETG-LEMAPTTLL 129 (135)
Q Consensus 57 ~~~~~~~~~~~~v~~~i~~~---~~~vLL~~r~~-~~~~g~w~~PgG~i~~gEs~~-~aa~REl~EE~G-l~~~~~~~~ 129 (135)
..++.+......+++++.++ +++|||+||.. ..++|.|+||||++++||+++ +||.||++|||| +.+...+.+
T Consensus 10 k~~k~~~~~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l 88 (155)
T 1x51_A 10 KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHL 88 (155)
T ss_dssp SSSCSCTTEEEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEEC
T ss_pred cCCCCCCCeEEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeec
Confidence 33334444444555555554 47999999874 468899999999999999996 999999999999 776654443
No 55
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.58 E-value=4.4e-15 Score=109.43 Aligned_cols=64 Identities=28% Similarity=0.540 Sum_probs=54.6
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
....+.++++++ ++|||++|. .|.|+||||++++||++.+||.||++||||+.+...+++++..
T Consensus 69 ~~~~v~~vv~~~-~~vLLvrr~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~ 132 (206)
T 3o8s_A 69 PKLDTRAAIFQE-DKILLVQEN----DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILD 132 (206)
T ss_dssp CEEEEEEEEEET-TEEEEEECT----TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEE
T ss_pred CCccEEEEEEEC-CEEEEEEec----CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEe
Confidence 344555666664 799999987 5899999999999999999999999999999998888887754
No 56
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.57 E-value=4.8e-15 Score=109.25 Aligned_cols=65 Identities=26% Similarity=0.392 Sum_probs=55.4
Q ss_pred EEEEEEEEcCCCeEEEEEeecCC-CCCeEEeeeEecC-CCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 67 YIVMAVIINSKNAVLMMQEAKSI-CNGAWYLPAGKVE-EGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 67 ~~v~~~i~~~~~~vLL~~r~~~~-~~g~w~~PgG~i~-~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
.++++++++.+++|||+++.+.+ +++.|+||||+++ +||++++||.||++||||+.+...++++.
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~ 110 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVD 110 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEE
T ss_pred CEEEEEEEcCCCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEE
Confidence 35667777888999999987543 5789999999999 99999999999999999999887766653
No 57
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.56 E-value=1.4e-14 Score=107.18 Aligned_cols=65 Identities=23% Similarity=0.389 Sum_probs=52.8
Q ss_pred EEEEEEEEc-CCCeEEEEEeecCC------CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 67 YIVMAVIIN-SKNAVLMMQEAKSI------CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 67 ~~v~~~i~~-~~~~vLL~~r~~~~------~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
.++++++++ ++++|||+++.+.+ .++.|+||||++++||++++||.||++||||+.+...+.++.
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~ 129 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLS 129 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEE
Confidence 356666777 56899998765432 257899999999999999999999999999999987766654
No 58
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.56 E-value=2.4e-15 Score=112.23 Aligned_cols=71 Identities=23% Similarity=0.343 Sum_probs=53.0
Q ss_pred cccEEEEEEEEcCCCeEEEEEeecCC----CCCeEEe-eeEecCCCCC--H----HHHHHHHHHHHHCCccccceEEEEE
Q psy10892 64 TVTYIVMAVIINSKNAVLMMQEAKSI----CNGAWYL-PAGKVEEGET--L----EEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 64 ~~~~~v~~~i~~~~~~vLL~~r~~~~----~~g~w~~-PgG~i~~gEs--~----~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
..+.++..+++.+++++||++|.+.. .+|.|.+ |||++++||| + ++||+||++||||+++...+++++.
T Consensus 65 ~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~ 144 (211)
T 3e57_A 65 TTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLI 144 (211)
T ss_dssp TEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEE
Confidence 34445555566667899999997543 4578998 9999999998 4 9999999999999999888898887
Q ss_pred eC
Q psy10892 133 TA 134 (135)
Q Consensus 133 ~~ 134 (135)
+.
T Consensus 145 ~~ 146 (211)
T 3e57_A 145 NS 146 (211)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 59
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.55 E-value=2.8e-15 Score=103.73 Aligned_cols=55 Identities=29% Similarity=0.559 Sum_probs=47.1
Q ss_pred EEEEEEEcCC-CeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCcccc
Q psy10892 68 IVMAVIINSK-NAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAP 125 (135)
Q Consensus 68 ~v~~~i~~~~-~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~ 125 (135)
++++++++++ ++|||++|.. +|.|.||||++++|||+++||.||++||||+.+..
T Consensus 6 ~~~~~i~~~~~~~vLl~~r~~---~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 61 (146)
T 2jvb_A 6 VRGAAIFNENLSKILLVQGTE---SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTD 61 (146)
T ss_dssp CEEEEEBCTTSSEEEEECCSS---SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSS
T ss_pred EEEEEEEeCCCCEEEEEEEcC---CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchH
Confidence 3556666665 8999998764 58999999999999999999999999999998764
No 60
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.55 E-value=1.5e-14 Score=105.41 Aligned_cols=64 Identities=20% Similarity=0.292 Sum_probs=51.2
Q ss_pred EEEEEEEEcC-CCeEEEEEeecCC-------CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEE
Q psy10892 67 YIVMAVIINS-KNAVLMMQEAKSI-------CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAV 131 (135)
Q Consensus 67 ~~v~~~i~~~-~~~vLL~~r~~~~-------~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~ 131 (135)
.+++++++++ ++++||+++.+.+ .++.|+||||+++ ||++++||.||++||||+.+...+.++.
T Consensus 46 ~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~ 117 (191)
T 3o6z_A 46 NGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFE 117 (191)
T ss_dssp CEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEE
Confidence 3456666664 5899999876422 4689999999999 9999999999999999999987776664
No 61
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.54 E-value=4.6e-14 Score=108.44 Aligned_cols=67 Identities=28% Similarity=0.457 Sum_probs=52.9
Q ss_pred cEEEEEEEEc--C---CCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEE
Q psy10892 66 TYIVMAVIIN--S---KNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVE 132 (135)
Q Consensus 66 ~~~v~~~i~~--~---~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~ 132 (135)
...+.++++. + +++|||++|.+.+++|.|.+|||++++||++++||.||++||||+.+....+..+.
T Consensus 39 ~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~ 110 (273)
T 2fml_A 39 SLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLH 110 (273)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEE
T ss_pred ceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEE
Confidence 3445555543 2 34899999987777899999999999999999999999999999877655444443
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.53 E-value=2.1e-14 Score=111.95 Aligned_cols=61 Identities=31% Similarity=0.376 Sum_probs=52.0
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccc
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPT 126 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~ 126 (135)
.+.++.++++ ++++|||++|.+.+++|.|++|||++++||++++||.||++||||+++...
T Consensus 202 ~~~~v~~vi~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 262 (341)
T 2qjo_A 202 TFITTDAVVV-QAGHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLP 262 (341)
T ss_dssp CEEEEEEEEE-ETTEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHH
T ss_pred CceEEEEEEE-eCCEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccc
Confidence 4455666666 467999999987666899999999999999999999999999999998754
No 63
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.53 E-value=2.2e-14 Score=112.53 Aligned_cols=60 Identities=32% Similarity=0.496 Sum_probs=51.4
Q ss_pred ccEEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCcccc
Q psy10892 65 VTYIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAP 125 (135)
Q Consensus 65 ~~~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~ 125 (135)
....+.++++ ++++|||++|.+.+++|.|+||||++++|||+++||.||++||||+++..
T Consensus 207 ~~~~v~~vv~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~ 266 (352)
T 2qjt_B 207 NFVTVDALVI-VNDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTH 266 (352)
T ss_dssp EEEEEEEEEE-ETTEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCH
T ss_pred CceEEEEEEE-ECCEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCccc
Confidence 4455666666 56799999998766679999999999999999999999999999998874
No 64
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.51 E-value=2.4e-14 Score=110.12 Aligned_cols=57 Identities=25% Similarity=0.496 Sum_probs=48.7
Q ss_pred EEEEEEEEcC-CCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCcccc
Q psy10892 67 YIVMAVIINS-KNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAP 125 (135)
Q Consensus 67 ~~v~~~i~~~-~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~ 125 (135)
.+++++++++ +++|||++|.+. +|.|++|||++++||++++||+||++||||+++..
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~~--~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~ 159 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWKA--SSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSS 159 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESST--TCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTT
T ss_pred CeEEEEEEECCCCEEEEEEEeCC--CCeEECCcccCCCCcCHHHHHHHHHHHHhCCCcee
Confidence 3456666665 489999998654 58899999999999999999999999999998875
No 65
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.47 E-value=7.8e-14 Score=104.29 Aligned_cols=66 Identities=24% Similarity=0.352 Sum_probs=51.7
Q ss_pred cEEEEEEEEc-CCCeEEEEEeecCC-C-------------------------------CCeEEeeeEecCC-CCCHHHHH
Q psy10892 66 TYIVMAVIIN-SKNAVLMMQEAKSI-C-------------------------------NGAWYLPAGKVEE-GETLEEAV 111 (135)
Q Consensus 66 ~~~v~~~i~~-~~~~vLL~~r~~~~-~-------------------------------~g~w~~PgG~i~~-gEs~~~aa 111 (135)
+.+|++++++ .++++||+++.+.+ + ++.|+||+|++++ |||+++||
T Consensus 36 ~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~eaA 115 (218)
T 3q91_A 36 HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVA 115 (218)
T ss_dssp CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCHHHHH
T ss_pred CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCHHHHH
Confidence 4566777777 45789998865422 1 5799999999999 99999999
Q ss_pred HHHHHHHHCCcc--ccceEEEE
Q psy10892 112 KREVLEETGLEM--APTTLLAV 131 (135)
Q Consensus 112 ~REl~EE~Gl~~--~~~~~~~~ 131 (135)
+||++||||+.+ .....++.
T Consensus 116 ~REl~EEtGl~~~~~~l~~l~~ 137 (218)
T 3q91_A 116 CKEAWEECGYHLAPSDLRRVAT 137 (218)
T ss_dssp HHHHHHHHCBCCCGGGCEEEEE
T ss_pred HHHHHHHhCCccccCceEEEEE
Confidence 999999999998 44454443
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.46 E-value=1.3e-13 Score=101.85 Aligned_cols=52 Identities=27% Similarity=0.368 Sum_probs=43.7
Q ss_pred CeEEEEEeecCC-CCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEE
Q psy10892 78 NAVLMMQEAKSI-CNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLL 129 (135)
Q Consensus 78 ~~vLL~~r~~~~-~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~ 129 (135)
++|||+++.+.+ .++.|+||||++++||++++||.||++||||+.+...+++
T Consensus 77 ~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l 129 (212)
T 2dsc_A 77 ECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 129 (212)
T ss_dssp CEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred cEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEe
Confidence 489998865433 4568999999999999999999999999999988765554
No 67
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.43 E-value=1.3e-13 Score=102.11 Aligned_cols=50 Identities=34% Similarity=0.532 Sum_probs=43.8
Q ss_pred EEcCCCeEEEEEeecCCCCCeEEeeeEecCCCC-CHHHHHHHHHHHHHCCccccc
Q psy10892 73 IINSKNAVLMMQEAKSICNGAWYLPAGKVEEGE-TLEEAVKREVLEETGLEMAPT 126 (135)
Q Consensus 73 i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gE-s~~~aa~REl~EE~Gl~~~~~ 126 (135)
++++++++||++| ++|.|+||||++++|| ++++||.||++||||+.+...
T Consensus 51 i~~~~~~vLl~~r----~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~ 101 (212)
T 1u20_A 51 RVPIRRVLLMMMR----FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATV 101 (212)
T ss_dssp TEECCEEEEEEEE----TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGC
T ss_pred EEecCCEEEEEEe----CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCcccc
Confidence 3466678988887 3689999999999999 999999999999999998754
No 68
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.40 E-value=1.5e-12 Score=98.27 Aligned_cols=62 Identities=15% Similarity=0.251 Sum_probs=53.0
Q ss_pred CcccEEEEEEEEcCCCeEEEEEeec--CCCCCeEEee-eEecCCC------CC---HHHHHHHHHHHHHCCccc
Q psy10892 63 KTVTYIVMAVIINSKNAVLMMQEAK--SICNGAWYLP-AGKVEEG------ET---LEEAVKREVLEETGLEMA 124 (135)
Q Consensus 63 ~~~~~~v~~~i~~~~~~vLL~~r~~--~~~~g~w~~P-gG~i~~g------Es---~~~aa~REl~EE~Gl~~~ 124 (135)
...+.++.+++++.++++||+||+. ..++|.|++| ||++++| |+ +++||+||++||||+.+.
T Consensus 56 g~~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~ 129 (235)
T 2dho_A 56 GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLE 129 (235)
T ss_dssp TCCEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGG
T ss_pred CceEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 4467788888999889999999874 3478999999 5999999 77 599999999999999865
No 69
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.39 E-value=4.8e-13 Score=106.12 Aligned_cols=56 Identities=30% Similarity=0.391 Sum_probs=48.7
Q ss_pred cCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCccccceEEEEEe
Q psy10892 75 NSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEMAPTTLLAVET 133 (135)
Q Consensus 75 ~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~~~~ 133 (135)
+++.+|||++|.. .|.|+||||++++|||+++||.||++||||+++...+++++..
T Consensus 35 ~~~~~vLLv~r~~---~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~ 90 (364)
T 3fjy_A 35 LDSIEVCIVHRPK---YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVE 90 (364)
T ss_dssp HTTEEEEEEEETT---TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC
T ss_pred CCceEEEEEEcCC---CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEE
Confidence 4456999999854 4899999999999999999999999999999998888777643
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.37 E-value=1.4e-12 Score=99.07 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=53.2
Q ss_pred CcccEEEEEEEEcCCCeEEEEEeec--CCCCCeEEeee-EecCCC------CCH---HHHHHHHHHHHHCCccc
Q psy10892 63 KTVTYIVMAVIINSKNAVLMMQEAK--SICNGAWYLPA-GKVEEG------ETL---EEAVKREVLEETGLEMA 124 (135)
Q Consensus 63 ~~~~~~v~~~i~~~~~~vLL~~r~~--~~~~g~w~~Pg-G~i~~g------Es~---~~aa~REl~EE~Gl~~~ 124 (135)
...+.++.+++++.++++||+||+. ..++|.|++|+ |++++| |++ ++||+||++||||+.+.
T Consensus 67 g~~h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~ 140 (246)
T 2pny_A 67 GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGE 140 (246)
T ss_dssp TCCEEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTT
T ss_pred CcEEEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 3467788888899889999999874 34799999985 999999 887 99999999999999865
No 71
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.28 E-value=1.1e-11 Score=96.81 Aligned_cols=64 Identities=19% Similarity=0.129 Sum_probs=54.3
Q ss_pred CCcccEEEEEEEEcCCC---eEEEEEeec--CCCCCeEE-eeeEecCCCCCHHHHHHHHHHHHHCCcccc
Q psy10892 62 KKTVTYIVMAVIINSKN---AVLMMQEAK--SICNGAWY-LPAGKVEEGETLEEAVKREVLEETGLEMAP 125 (135)
Q Consensus 62 ~~~~~~~v~~~i~~~~~---~vLL~~r~~--~~~~g~w~-~PgG~i~~gEs~~~aa~REl~EE~Gl~~~~ 125 (135)
..-.++++.+.+++.++ ++||+||+. ..|+|.|. +++|++++||++.+||.||+.||+|+....
T Consensus 114 ~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~ 183 (300)
T 3dup_A 114 FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEAL 183 (300)
T ss_dssp GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHH
T ss_pred cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhh
Confidence 34567778888877766 899999973 55999995 999999999999999999999999998653
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.24 E-value=7.7e-12 Score=94.35 Aligned_cols=61 Identities=26% Similarity=0.384 Sum_probs=47.2
Q ss_pred ccEEEEEEEEcC--C--CeEEEEEeecCC--CCCeEEeeeEecCCCCC--------------------HHHHHHHHHHHH
Q psy10892 65 VTYIVMAVIINS--K--NAVLMMQEAKSI--CNGAWYLPAGKVEEGET--------------------LEEAVKREVLEE 118 (135)
Q Consensus 65 ~~~~v~~~i~~~--~--~~vLL~~r~~~~--~~g~w~~PgG~i~~gEs--------------------~~~aa~REl~EE 118 (135)
.+.+..++++.+ + .+|||+||.... ++|.|.||||++|++|+ +..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 334444554443 2 389999998643 58999999999999886 589999999999
Q ss_pred HCCcccc
Q psy10892 119 TGLEMAP 125 (135)
Q Consensus 119 ~Gl~~~~ 125 (135)
||+.+..
T Consensus 87 ~Gl~l~~ 93 (232)
T 3qsj_A 87 IGWLLAV 93 (232)
T ss_dssp HSCCCSE
T ss_pred hCceecc
Confidence 9997653
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.23 E-value=1.9e-11 Score=94.77 Aligned_cols=42 Identities=29% Similarity=0.559 Sum_probs=38.5
Q ss_pred eEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCCcc
Q psy10892 79 AVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGLEM 123 (135)
Q Consensus 79 ~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl~~ 123 (135)
+|||++|.. .|.|.+|||++++||++.+||+||++||||+.+
T Consensus 140 ~vLl~~r~~---~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 140 QFVAIKRKD---CGEWAIPGGMVDPGEKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEECTT---TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGG
T ss_pred EEEEEEecC---CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcc
Confidence 699998865 389999999999999999999999999999973
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.18 E-value=1.6e-11 Score=91.58 Aligned_cols=43 Identities=35% Similarity=0.536 Sum_probs=37.7
Q ss_pred eEEEEEeecCCCCCeEEeeeEecCCCC-CHHHHHHHHHHHHHCCcccc
Q psy10892 79 AVLMMQEAKSICNGAWYLPAGKVEEGE-TLEEAVKREVLEETGLEMAP 125 (135)
Q Consensus 79 ~vLL~~r~~~~~~g~w~~PgG~i~~gE-s~~~aa~REl~EE~Gl~~~~ 125 (135)
++||+.|. +|.|+||||++++|| ++++||.||++||||+.+..
T Consensus 66 ~~ll~~r~----~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~ 109 (217)
T 2xsq_A 66 AILMQMRF----DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAA 109 (217)
T ss_dssp EEEEEEET----TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGG
T ss_pred cEEEEEcc----CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCcc
Confidence 56666554 588999999999999 99999999999999998873
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.18 E-value=1.2e-10 Score=86.07 Aligned_cols=50 Identities=28% Similarity=0.419 Sum_probs=41.5
Q ss_pred EEEEEEEcCCC--eEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHHCC
Q psy10892 68 IVMAVIINSKN--AVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEETGL 121 (135)
Q Consensus 68 ~v~~~i~~~~~--~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~Gl 121 (135)
+.+++++++++ +|||+|+.. +.|.+|||++++||+.++|+.||+.||+|+
T Consensus 61 V~avil~~~~~~phVLLlq~~~----~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 61 VEGVLIVHEHRLPHVLLLQLGT----TFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp EEEEEEEEETTEEEEEEEEEET----TEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEcCCCCcEEEEEEcCC----CcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 44444555444 799999853 689999999999999999999999999994
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.01 E-value=1.3e-10 Score=85.52 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=33.7
Q ss_pred CCeEEeeeEecCCCC-CHHHHHHHHHHHHHCC-ccccceEEEE
Q psy10892 91 NGAWYLPAGKVEEGE-TLEEAVKREVLEETGL-EMAPTTLLAV 131 (135)
Q Consensus 91 ~g~w~~PgG~i~~gE-s~~~aa~REl~EE~Gl-~~~~~~~~~~ 131 (135)
+|.|+||||+||+|| |+++|+.||+.||+|+ .+...+++..
T Consensus 53 ~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s 95 (214)
T 3kvh_A 53 DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSS 95 (214)
T ss_dssp TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEE
T ss_pred CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEE
Confidence 489999999999999 9999999999999996 5666555543
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.86 E-value=3e-09 Score=83.60 Aligned_cols=59 Identities=25% Similarity=0.323 Sum_probs=45.2
Q ss_pred EEEEEEEEcCCCeEEEEEeecCCCCCeEEeeeEecCCCCCHHHHHHHHHHHHH-CCccccceEEEEEeC
Q psy10892 67 YIVMAVIINSKNAVLMMQEAKSICNGAWYLPAGKVEEGETLEEAVKREVLEET-GLEMAPTTLLAVETA 134 (135)
Q Consensus 67 ~~v~~~i~~~~~~vLL~~r~~~~~~g~w~~PgG~i~~gEs~~~aa~REl~EE~-Gl~~~~~~~~~~~~~ 134 (135)
.++++++ ..+++|||+ .+ .| |.+|||.++.+++ ++|.||++||+ |+++....+++|+..
T Consensus 184 ~~vgaii-~~~g~vLL~--~~---~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v~~~ 243 (321)
T 3rh7_A 184 IRLGAVL-EQQGAVFLA--GN---ET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSVYED 243 (321)
T ss_dssp EEEEEEE-ESSSCEEEB--CS---SE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEEEEC
T ss_pred ceEEEEE-EECCEEEEe--eC---CC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeeceEEEEEEc
Confidence 3444544 556899999 22 57 9999887655444 59999999997 999999999999863
No 78
>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens}
Probab=91.14 E-value=0.017 Score=44.48 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=44.6
Q ss_pred ccccccccccccccchhhHHHhhCCCcccCCCCCCCCCccccccccccCCCC
Q psy10892 2 YRYSKNIMANHEAIITPVLENIFSGKVCHDGEDQCDYDLTEQADFAPARGVI 53 (135)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~c~~~~~~~~~~a~~~~~~ 53 (135)
|.+++.+++.....-.+++.+.+|...|.+..|.|.-|+....|.+...+..
T Consensus 185 ~~~a~~~lp~~~~~~~h~~L~~~Gr~iC~~r~P~C~~Cpl~~~C~~~~~~~~ 236 (287)
T 3n5n_X 185 WGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQ 236 (287)
T ss_dssp HHHHHHHSCSSCHHHHHHHHHHHHHHTSCSSSCCTTSCTTGGGCHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhHHHcCCCCCCCCCCCChhhhHHHHhcch
Confidence 4455677888888889999999999999999999999999999987766544
No 79
>1kg2_A A/G-specific adenine glycosylase; DNA repair, hydrolase; 1.20A {Escherichia coli} SCOP: a.96.1.2 PDB: 1kg3_A 1muy_A 1kg6_A 1kg5_A 1mun_A 1mud_A 1kg4_A 1weg_A 1wei_A* 1wef_A* 1kg7_A 1kqj_A
Probab=89.83 E-value=0.025 Score=41.71 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=44.3
Q ss_pred ccccccccccccccchhhHHHhhCCCcccCCCCCCCCCccccccccccCCCCC
Q psy10892 2 YRYSKNIMANHEAIITPVLENIFSGKVCHDGEDQCDYDLTEQADFAPARGVIP 54 (135)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~c~~~~~~~~~~a~~~~~~~ 54 (135)
+.+++.+++.......+++...+|...|....|.|+-|+....|.+...+...
T Consensus 165 ~~~~~~~~p~~~~~~~~~~lv~~G~~~C~~~~P~C~~Cpl~~~C~~~~~~~~~ 217 (225)
T 1kg2_A 165 WSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWA 217 (225)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHHHTCGG
T ss_pred HHHHHHHCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCChhhCHHHHcCCcc
Confidence 34556677777788889999999999999999999999999999887766553
No 80
>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.96.1.2
Probab=88.85 E-value=0.041 Score=40.50 Aligned_cols=47 Identities=9% Similarity=0.022 Sum_probs=39.0
Q ss_pred cccccccccccccchhhHHHhhCCCcccCCCCCCCCCcccccccccc
Q psy10892 3 RYSKNIMANHEAIITPVLENIFSGKVCHDGEDQCDYDLTEQADFAPA 49 (135)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~c~~~~~~~~~~a~~ 49 (135)
.+++..++.....-.+++...+|...|.+..|.|.-|+....|....
T Consensus 171 ~~ae~~~P~~~~~~~~~~lv~~G~~~C~~~~P~C~~Cpl~~~C~~~~ 217 (221)
T 1kea_A 171 ELAETLVPGGKCRDFNLGLMDFSAIICAPRKPKCEKCGMSKLCSYYE 217 (221)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHH
T ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHcCCCCCCCCCCCChhhchhhh
Confidence 34455577777888899999999999999999999999999997543
No 81
>2abk_A Endonuclease III; DNA-repair, DNA glycosylase; 1.85A {Escherichia coli} SCOP: a.96.1.1
Probab=80.27 E-value=0.4 Score=34.77 Aligned_cols=44 Identities=7% Similarity=-0.017 Sum_probs=37.7
Q ss_pred ccccccccccccchhhHHHhhCCCcccCCCCCCCCCcccccccc
Q psy10892 4 YSKNIMANHEAIITPVLENIFSGKVCHDGEDQCDYDLTEQADFA 47 (135)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~c~~~~~~~~~~a 47 (135)
+++.+++.......+++...+|...|....|.|+-|+....|..
T Consensus 162 ~~~~~~p~~~~~~~~~~l~~~G~~~C~~~~P~C~~Cpl~~~C~~ 205 (211)
T 2abk_A 162 KLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEY 205 (211)
T ss_dssp HHHHHSCGGGTTTHHHHHHHHHHHTSCSSSCCGGGCTTGGGCCC
T ss_pred HHHHhcChhhHHHHHHHHHHHHHHHCCCCCCCCCCCCChhhCCC
Confidence 44556777778888999999999999999999999999999964
No 82
>1orn_A Endonuclease III; DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, hydrolase/DNA complex; HET: PED; 1.70A {Geobacillus stearothermophilus} SCOP: a.96.1.1 PDB: 1orp_A* 1p59_A*
Probab=69.49 E-value=0.68 Score=33.99 Aligned_cols=46 Identities=17% Similarity=0.073 Sum_probs=37.0
Q ss_pred cccccccccccchhhHHHhhCCCcccCCCCCCCCCccccccccccC
Q psy10892 5 SKNIMANHEAIITPVLENIFSGKVCHDGEDQCDYDLTEQADFAPAR 50 (135)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~c~~~~~~~~~~a~~~ 50 (135)
.+.+++........+....+|...|....|.|+-|+....|.....
T Consensus 168 l~~~~p~~~~~~~~~~lv~~G~~~C~~~~P~C~~Cpl~~~C~~~~~ 213 (226)
T 1orn_A 168 LMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKK 213 (226)
T ss_dssp HHHHSCGGGHHHHHHHHHHHHHHTSCSSCCCGGGCTTGGGCHHHHH
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHcCCCCCCCCCCCChhhhhhHhh
Confidence 3445566666778888999999999999999999999999975433
No 83
>4efo_A Serine/threonine-protein kinase TBK1; ubiquitin like domain, transferase; 1.77A {Homo sapiens}
Probab=25.09 E-value=86 Score=19.68 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=21.0
Q ss_pred ecCCCCCHHHHHHHHHHHHHCCccccceEEE
Q psy10892 100 KVEEGETLEEAVKREVLEETGLEMAPTTLLA 130 (135)
Q Consensus 100 ~i~~gEs~~~aa~REl~EE~Gl~~~~~~~~~ 130 (135)
.|++.|++.. ....+.|.||+.....+++.
T Consensus 29 ~I~~~etv~~-~ke~V~eqTgIp~~~Q~LL~ 58 (94)
T 4efo_A 29 YIHSYNTATI-FHELVYKQTKIISSNQELIY 58 (94)
T ss_dssp EEETTCBHHH-HHHHHHHHHCCCGGGEEEEE
T ss_pred EeccchHHHH-HHHHHHHHhCCCHHHHHHHh
Confidence 3456666655 45569999999888776654
No 84
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.12 E-value=12 Score=24.21 Aligned_cols=29 Identities=10% Similarity=0.110 Sum_probs=23.1
Q ss_pred cccccccccccccchhhHHHhhCCCcccC
Q psy10892 3 RYSKNIMANHEAIITPVLENIFSGKVCHD 31 (135)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 31 (135)
|+|++|....++.+++.+..+..++.+..
T Consensus 26 rLAq~i~~~~d~d~eekVk~L~EmtG~se 54 (104)
T 1wj7_A 26 RLAQMISDHNDADFEEKVKQLIDITGKNQ 54 (104)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHhcCCcccHHHHHHHHHHhhCCCH
Confidence 68888888888888888888888766553
Done!