Your job contains 1 sequence.
>psy10895
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLL
WLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSF
QWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSG
DPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGA
KKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMV
SLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVT
ATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSW
HGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVA
PHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAV
SYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKD
ALDSIRKYTATADPAILLWSFFITGLAIIYLRGGPKHTASAKESHGKSKSQQQHQSSGSK
N
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10895
(661 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:2146015 - symbol:Lmf2 "lipase maturation factor 2... 1140 1.2e-115 1
UNIPROTKB|Q9BU23 - symbol:LMF2 "Lipase maturation factor ... 1119 1.9e-113 1
UNIPROTKB|A1L504 - symbol:LMF2 "Lipase maturation factor ... 1117 3.2e-113 1
RGD|1306274 - symbol:Lmf2 "lipase maturation factor 2" sp... 1113 8.4e-113 1
ZFIN|ZDB-GENE-080723-47 - symbol:lmf2a "lipase maturation... 1104 7.6e-112 1
UNIPROTKB|Q5ZKZ9 - symbol:LMF2 "Lipase maturation factor ... 1055 1.2e-106 1
ZFIN|ZDB-GENE-070206-11 - symbol:lmf2b "lipase maturation... 935 6.1e-94 1
WB|WBGene00019657 - symbol:K11G12.6 species:6239 "Caenorh... 424 8.4e-70 2
MGI|MGI:1923733 - symbol:Lmf1 "lipase maturation factor 1... 360 8.3e-53 2
UNIPROTKB|Q96S06 - symbol:LMF1 "Lipase maturation factor ... 348 2.1e-52 2
UNIPROTKB|E1C1X8 - symbol:E1C1X8 "Uncharacterized protein... 341 3.4e-51 2
UNIPROTKB|Q0P5C0 - symbol:LMF1 "Lipase maturation factor ... 345 6.2e-51 2
DICTYBASE|DDB_G0287645 - symbol:DDB_G0287645 "DUF1222 fam... 335 9.6e-47 3
UNIPROTKB|H3BVI4 - symbol:LMF1 "Lipase maturation factor ... 262 3.0e-33 2
UNIPROTKB|B3KS80 - symbol:LA16c-360B4.1 "Lipase maturatio... 262 2.9e-31 2
RGD|1310180 - symbol:Lmf1 "lipase maturation factor 1" sp... 250 1.9e-29 2
UNIPROTKB|F1RG34 - symbol:LMF1 "Uncharacterized protein" ... 254 6.4e-29 2
UNIPROTKB|H3BN37 - symbol:LMF1 "Lipase maturation factor ... 275 3.9e-23 1
GENEDB_PFALCIPARUM|PFF0645c - symbol:PFF0645c "integral m... 166 8.1e-12 3
UNIPROTKB|C6KSX6 - symbol:PFF0645c "Integral membrane pro... 166 8.1e-12 3
>MGI|MGI:2146015 [details] [associations]
symbol:Lmf2 "lipase maturation factor 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:2146015 GO:GO:0016021
GO:GO:0005789 eggNOG:NOG81106 GeneTree:ENSGT00530000063702
InterPro:IPR009613 Pfam:PF06762 CTD:91289 HOGENOM:HOG000019333
HOVERGEN:HBG108090 OrthoDB:EOG4W6NVR EMBL:AK084606 EMBL:AK149916
EMBL:AK149934 EMBL:AK171488 EMBL:BC079532 IPI:IPI00310701
RefSeq:NP_849250.1 UniGene:Mm.34511 ProteinModelPortal:Q8C3X8
PhosphoSite:Q8C3X8 PaxDb:Q8C3X8 PRIDE:Q8C3X8
Ensembl:ENSMUST00000023283 GeneID:105847 KEGG:mmu:105847
UCSC:uc007xgd.2 InParanoid:Q8C3X8 OMA:LYTQIPG NextBio:357928
Bgee:Q8C3X8 CleanEx:MM_LMF2 Genevestigator:Q8C3X8 Uniprot:Q8C3X8
Length = 702
Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
Identities = 248/661 (37%), Positives = 359/661 (54%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
+ LFL+ + VY+FAFASLY QIPGL+G GILPAR L + L ++L PTLLW
Sbjct: 8 QQLFLQGVAAVYLFAFASLYTQIPGLYGPEGILPARRTLR-PQGKGLWQQLWETPTLLWE 66
Query: 63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
AP +GL T +D+++L+G LA + + LW Y S +QVGQ F+ FQW
Sbjct: 67 APRLGLDTAQGLDLLTLLGTVLALGALLLNSLRHPFVYLLLWVAYRSAYQVGQVFLYFQW 126
Query: 123 DTLLLETGFLCIIVSPF-GINKDSSRKG----SSPSDQVKFWLVRWLLFRLIVTSPINKL 177
D+LLLETGFL I+V+P G +K +G + P + + FWLVRWLLFRL+ S + KL
Sbjct: 127 DSLLLETGFLAILVAPLRGPSKHKILQGRLAGALPHEDLPFWLVRWLLFRLMFASGVVKL 186
Query: 178 SSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXX 237
+S P+WW L AL H+++ LPTP AW++HHLP W +L+ + E
Sbjct: 187 TSRCPTWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPI 246
Query: 238 KGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFY--PDLN-RKKNKXX- 293
+ + AFY Q LQ+ II TGN+N++NLLT+ L +LLDD + P L KK
Sbjct: 247 RRLRLTAFYAQALLQVLIIITGNYNFFNLLTLVLTTALLDDRHLSAEPGLRCHKKMPTSW 306
Query: 294 -----XXXXXXXXXXXFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLIL 348
+G + FG++VD + + S+ TF+ Q+ +L +
Sbjct: 307 PKALLTALSLLLELTVYGLLAYGTVYYFGLEVDWQQHIILSKTTFTFHQFSQWLKTVTLP 366
Query: 349 ALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPA 408
++LG AS LW ++ K ++ + S ++ +F I+ VP + + P
Sbjct: 367 TVWLGTASLAWELLVVLWRWIQVQGWSRKFSAGIQLSVLGTATVALFLISLVPYSYVEPG 426
Query: 409 VNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYK 468
+ L G + HL ++N Y LFR MTGV GRPEV++EG+ + Q WTEI F YK
Sbjct: 427 THGRLWTGAHRLFGSVEHLQLANSYGLFRRMTGVGGRPEVVLEGSYDGQH-WTEIEFMYK 485
Query: 469 PGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDS--TH 526
PGNV+R PF+ PHQPRLDWQMWFAALG + +PW + L R+L + V+ L+ S +
Sbjct: 486 PGNVSRPPPFLTPHQPRLDWQMWFAALGPHTHSPWFTGLVLRLLQGKEPVIRLVQSHVAN 545
Query: 527 YPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGIL 586
YPF + P +LRA YKY ++ ++ +WW R+ EE+FP L L QFG+
Sbjct: 546 YPFHERPPTYLRAQRYKYWFSKPGDQS-RWWHRQWVEEFFPSVSLGDPTLETLLQQFGLK 604
Query: 587 KKRKPEHIEPQ--VKDALDSIRKYTATADPAILLWSFF--ITGLAIIYLRGGPKHTASAK 642
K P P + L+ +R + +P ILLW F + + ++ P+ S+K
Sbjct: 605 DKSPPRARSPSNGLAQTLNWVRTQLSPLEPPILLWGLFGAVVAIRVVQTLLAPRPLQSSK 664
Query: 643 E 643
+
Sbjct: 665 Q 665
>UNIPROTKB|Q9BU23 [details] [associations]
symbol:LMF2 "Lipase maturation factor 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
GO:GO:0016021 GO:GO:0005789 EMBL:U62317 eggNOG:NOG81106
InterPro:IPR009613 Pfam:PF06762 CTD:91289 HOGENOM:HOG000019333
HOVERGEN:HBG108090 OrthoDB:EOG4W6NVR EMBL:CR456605 EMBL:BC002942
EMBL:BC014652 EMBL:BC021143 EMBL:AK130818 IPI:IPI00385495
IPI:IPI00852693 IPI:IPI00854764 RefSeq:NP_149977.2
UniGene:Hs.150540 PhosphoSite:Q9BU23 DMDM:74733167 PaxDb:Q9BU23
PRIDE:Q9BU23 DNASU:91289 Ensembl:ENST00000216080
Ensembl:ENST00000380796 Ensembl:ENST00000474879 GeneID:91289
KEGG:hsa:91289 UCSC:uc003blo.2 UCSC:uc003blp.2
GeneCards:GC22M050941 H-InvDB:HIX0016614 HGNC:HGNC:25096
neXtProt:NX_Q9BU23 PharmGKB:PA162394144 InParanoid:Q9BU23
ChiTaRS:LMF2 GenomeRNAi:91289 NextBio:77159 Bgee:Q9BU23
CleanEx:HS_LMF2 Genevestigator:Q9BU23 Uniprot:Q9BU23
Length = 707
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 240/649 (36%), Positives = 356/649 (54%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
R LFL+ + V++FAFASLY QIPGL+G GILPAR L + ++L PTLLW
Sbjct: 8 RQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLR-PQGKGRWQQLWETPTLLWE 66
Query: 63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
AP +GL T ++++SL+G +A + + LW+ Y S QVGQ F+ FQW
Sbjct: 67 APRLGLDTAQGLELLSLLGALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQW 126
Query: 123 DTLLLETGFLCIIVSPF---GINKDSSR---KGSSPSDQVKFWLVRWLLFRLIVTSPINK 176
D+LLLETGFL ++V+P K++ + G+ P + + FWLVRWLLFRL+ S + K
Sbjct: 127 DSLLLETGFLAVLVAPLRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVK 186
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
L+S P+WW L AL H+++ LPTP AW++HHLP W +L+ + E
Sbjct: 187 LTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAP 246
Query: 237 XKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDL---NRKKNKXX 293
+ + AFY Q+ LQ+ II TGN+N++NL+T+ L +LLDD + + +RKK
Sbjct: 247 IRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATS 306
Query: 294 ------XXXXXXXXXXXFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLI 347
+G + FG++VD + T+ S+ TF+ Q+ +L +
Sbjct: 307 WPKALLATLSLLLELAVYGLLAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTL 366
Query: 348 LALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHP 407
++LG+AS + +ALW + L KL+++V S ++ +F I+ VP + + P
Sbjct: 367 PTVWLGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEP 426
Query: 408 AVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRY 467
+ L G + HL ++N Y LFR MTG+ GRPEV++EG+ + WTEI F Y
Sbjct: 427 GTHGRLWTGAHRLFGAVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHH-WTEIEFMY 485
Query: 468 KPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDS--T 525
KPGN++R P V PHQPRLDWQMWFAALG + +PW +SL R+L + V+ L+ S
Sbjct: 486 KPGNLSRPPPVVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVA 545
Query: 526 HYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGI 585
YPF + P ++RA YKY ++ + QWW R+ EE+FP L L QFG+
Sbjct: 546 RYPFHKQPPTYVRAQRYKYWFSQPGEQG-QWWRRQWVEEFFPSVSLGDPTLETLLRQFGL 604
Query: 586 LKKRKPE--HIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLR 632
+K P + AL R + + LLW + A+ +++
Sbjct: 605 QEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLMAVGAVRFVQ 653
>UNIPROTKB|A1L504 [details] [associations]
symbol:LMF2 "Lipase maturation factor 2" species:9913 "Bos
taurus" [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] GO:GO:0016021
GO:GO:0005789 eggNOG:NOG81106 InterPro:IPR009613 Pfam:PF06762
EMBL:BT029791 EMBL:BC108115 IPI:IPI00685637 IPI:IPI00889480
RefSeq:NP_001032532.1 UniGene:Bt.3942 GeneID:510646 KEGG:bta:510646
CTD:91289 HOGENOM:HOG000019333 HOVERGEN:HBG108090 InParanoid:A1L504
OrthoDB:EOG4W6NVR NextBio:20869547 Uniprot:A1L504
Length = 703
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 245/662 (37%), Positives = 360/662 (54%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
R LFL+ + V++FAFASLY QIPGL+G GILPAR L + ++L PTLLW
Sbjct: 8 RQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLR-PQGKGRWQQLWETPTLLWE 66
Query: 63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
AP +GL T ++++SL+G LA ++++ + LW+ Y S+ QVGQ F+ FQW
Sbjct: 67 APLLGLDTAQGLELLSLLGTVLALGALLTRQLHHPLVYLLLWAAYLSVCQVGQVFLYFQW 126
Query: 123 DTLLLETGFLCIIVSPFGI---NKDS--SRKGS-SPSDQVKFWLVRWLLFRLIVTSPINK 176
D+LLLETGFL ++V+P G+ +K + R G SP + + FWLVRWLLFRL+ S + K
Sbjct: 127 DSLLLETGFLAMLVAPLGLPPNHKQAPQGRPGGVSPHEGLPFWLVRWLLFRLMFASGVVK 186
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
L+S P+WW L AL H+++ LPTP AW++HHLP W +L+ + E
Sbjct: 187 LTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAP 246
Query: 237 XKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKXXXXX 296
+ + AFY Q+ LQ+ II TGN+N++NLLT+ L +LLDD++ + + K
Sbjct: 247 VRRLRLAAFYSQVLLQVLIILTGNYNFFNLLTLVLTTALLDDTHLAAKSSTSRRKRMPSS 306
Query: 297 ---------XXXXXXXXFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLI 347
+G FG++VD + V+S+ F+ Q +L +
Sbjct: 307 WPKALLAMLTLLLELAVYGLLACGVVHYFGLEVDWEQHVVRSRTMFTFHQLSQWLKTVTL 366
Query: 348 LALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHP 407
++LG AS TALW ++ L KL + V S + ++ +F I+ VP + + P
Sbjct: 367 PTMWLGAASLAWELLTALWRWVQVRGSLRKLCAAVQLSVFGTATVALFLISLVPYSYMEP 426
Query: 408 AVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRY 467
+ + L + HL ++N Y LFR MTG+ GRPEV++EG+ + WTEI F Y
Sbjct: 427 SSHGRLWTGAHRLFSTVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGH-QWTEIEFMY 485
Query: 468 KPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDS--T 525
KPGN++R P V PHQPRLDWQMWFAALG + +PW +SL R+L + V+ L+ +
Sbjct: 486 KPGNLSRPPPIVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQNHVP 545
Query: 526 HYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGI 585
YPF + P ++RA YKY ++ + QWW R+ EE+FP L L QFG+
Sbjct: 546 SYPFHQQPPTYVRAQLYKYWFSHPWEQG-QWWRRQWVEEFFPSVSLGDPALDMLLRQFGL 604
Query: 586 LKKRKPEH--IEPQVKDALDSIRKYTATADPAILLWSFF--ITGLAIIYLRGGPKHTASA 641
K P + AL +RK + + LLW + + ++ GP+
Sbjct: 605 QDKSPPRAGGSSNTLSQALHWVRKQLSPLEAPALLWGLLGAVGAIKVMQALLGPQSLPRT 664
Query: 642 KE 643
KE
Sbjct: 665 KE 666
>RGD|1306274 [details] [associations]
symbol:Lmf2 "lipase maturation factor 2" species:10116 "Rattus
norvegicus" [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
RGD:1306274 GO:GO:0016021 GO:GO:0005789 eggNOG:NOG81106
GeneTree:ENSGT00530000063702 InterPro:IPR009613 Pfam:PF06762
CTD:91289 HOGENOM:HOG000019333 HOVERGEN:HBG108090 OrthoDB:EOG4W6NVR
OMA:LYTQIPG EMBL:BC088333 EMBL:BC129102 IPI:IPI00361476
RefSeq:NP_001073408.1 UniGene:Rn.38271 PRIDE:A1L1J9
Ensembl:ENSRNOT00000049538 GeneID:315218 KEGG:rno:315218
InParanoid:A1L1J9 NextBio:668918 Genevestigator:A1L1J9
Uniprot:A1L1J9
Length = 702
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 247/663 (37%), Positives = 360/663 (54%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
+ LFL+ + VY+FAFASLY QIPGL+G GILPAR L + ++L PT+LW
Sbjct: 8 QQLFLQGVAAVYLFAFASLYTQIPGLYGPEGILPARRTLR-PQGKGRWQQLWETPTILWE 66
Query: 63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
AP +GL T +D+++L+G LA + + LW+ Y S QVGQ F+ FQW
Sbjct: 67 APRLGLDTAQGLDLLTLLGTVLALGALLLNSLRHPFIYLLLWAAYLSACQVGQVFLYFQW 126
Query: 123 DTLLLETGFLCIIVSPFGINKDSSRK-------GSSPSDQVKFWLVRWLLFRLIVTSPIN 175
D+LLLETGFL I+V+P + + S K G+ P + + FWLVRWLLFRL+ S +
Sbjct: 127 DSLLLETGFLAILVAP--LRRPSKHKIPQGGLAGALPHEDLPFWLVRWLLFRLMFASGVV 184
Query: 176 KLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXX 235
KL+S P+WW L AL H+++ LPTP AW++HHLP W RL+ + E
Sbjct: 185 KLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHRLSVVATFLIEIAVPPLFFA 244
Query: 236 XXKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFY--PDLN-RKKNKX 292
+ + AFY Q LQ+ II TGN+N++NLLT+ L +LLDD + P+L KK
Sbjct: 245 PIRRLRLSAFYAQALLQILIIITGNYNFFNLLTLVLTTALLDDRHLSAEPELRCHKKMPT 304
Query: 293 X------XXXXXXXXXXXFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGL 346
+G + FG++VD + V S+ TF+ Q+ +L
Sbjct: 305 SWPKTLLTSLSLMLELTVYGLLAYGTIYYFGLEVDWQQQIVLSKTTFTFHQFSQWLKMVT 364
Query: 347 ILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLH 406
+ ++LG AS ALW ++ K + + S ++ +F I+ VP + +
Sbjct: 365 LPTVWLGTASLAWELLIALWRWIQVQGWSRKFFAGIQLSVLGTATVFLFLISLVPYSYVE 424
Query: 407 PAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFR 466
P + L + HL ++N Y LFR MTG+ GRPEV++EG+ + WTEI F
Sbjct: 425 PGTHGRLWTGAHRLFSSVEHLQLANSYGLFRRMTGLGGRPEVVLEGSHDGHH-WTEIEFM 483
Query: 467 YKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDS-- 524
YKPGNV+R PF+ PHQPRLDWQMWFAALG + +PW +SL R+L + V+ L+ +
Sbjct: 484 YKPGNVSRPPPFLIPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLIQNQV 543
Query: 525 THYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFG 584
+YPF+ + P +LRA YKY ++ ++ +WW R+ EE+FP L L QFG
Sbjct: 544 ANYPFREQPPTYLRAQRYKYWFSKPGDQS-RWWHRQWVEEFFPSVSLGDPTLETLLQQFG 602
Query: 585 ILKKRKPEHIEPQ--VKDALDSIRKYTATADPAILLWSFFITGLAIIYLRG--GPKHTAS 640
+ K P + + L+ +R + +P+ILLW +AI +R P+ S
Sbjct: 603 LKDKSPPRARSSKNALAQTLNWVRAQLSPLEPSILLWGLLGAVVAIRVVRTLLTPRPLQS 662
Query: 641 AKE 643
+K+
Sbjct: 663 SKQ 665
>ZFIN|ZDB-GENE-080723-47 [details] [associations]
symbol:lmf2a "lipase maturation factor 2a"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-080723-47 eggNOG:NOG81106
GeneTree:ENSGT00530000063702 InterPro:IPR009613 Pfam:PF06762
HOGENOM:HOG000019333 HOVERGEN:HBG108090 OrthoDB:EOG4W6NVR
OMA:LYTQIPG EMBL:CU499387 EMBL:BC163708 IPI:IPI00896842
RefSeq:NP_001122236.1 UniGene:Dr.148367 Ensembl:ENSDART00000111343
Ensembl:ENSDART00000128890 GeneID:571852 KEGG:dre:571852 CTD:571852
NextBio:20890727 Uniprot:B3DK37
Length = 737
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 234/644 (36%), Positives = 361/644 (56%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
R++FL + ++Y+FAFAS+Y+QIPGL+G++G+LP R ++ + ++L PTLLW
Sbjct: 8 RHMFLWCLSVIYMFAFASIYVQIPGLYGNDGVLPVRWRMRVSGK-SVVEQLKDSPTLLWF 66
Query: 63 APFIGLSTEYMMDVISLVGIFLAF-TGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQ 121
AP +GL ++ M+++SL+G L+ T + C+ F LW+LY SL+QVGQ F+ FQ
Sbjct: 67 APRLGLDSQQCMELLSLIGTLLSLMTVALPVLRDCRV-FLLLWTLYLSLYQVGQVFLYFQ 125
Query: 122 WDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGD 181
WD LLLETGFL I+++P + S + D V FWL+RWLLFRL+ S + KL+S
Sbjct: 126 WDNLLLETGFLAILIAPMKMPWSSKVR---LYDNVTFWLLRWLLFRLMFASGVVKLTSRC 182
Query: 182 PSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKGAK 241
P+WW L AL H+++ +PTPLAW++H LP WF +L+ + E + +
Sbjct: 183 PTWWGLTALTYHYETQCIPTPLAWFAHQLPVWFQKLSVVGTYVIEIAVPFLFFSPIRRHR 242
Query: 242 KIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSY--FY---PDLNRKKNKXXXXX 296
AFY Q+ LQ+ II +GN+N++N+LTI LCLSLLDD + F+ P +K
Sbjct: 243 LAAFYMQVLLQVLIILSGNYNFFNILTITLCLSLLDDQHVNFWLRRPTTKTEKTSLQTLF 302
Query: 297 XXXXXXXXFGATVFAFY---KLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLG 353
G Y K F ++VD + +V S+ F+ +++ +L + ++++G
Sbjct: 303 SALTVMLEIGVYALLCYWTVKYFDLQVDWEKKSVSSKTAFTYFEFNGFLKIVTLPSIWIG 362
Query: 354 LASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTL 413
+ S TA++ L +L + + + ++ +F+I+ VP + + L
Sbjct: 363 VLSLTWEIITAMFRCACVKGVLWRLWTSIQWAVMAAATVSMFAISLVPYTYIEYDAHSKL 422
Query: 414 HPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVN 473
P +++ ++N Y LFR MTGV GRPEV+IEG+ +R WTEI F YKPGN++
Sbjct: 423 WPGIRTAFEITDRYQLANSYGLFRRMTGVGGRPEVVIEGSMDRH-TWTEIEFMYKPGNMS 481
Query: 474 RTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLL--DSTHYPFKA 531
P V PHQPRLDWQMWFAALG + Q+PW SSL +R+L + +V+ L+ D + YPF
Sbjct: 482 AAPPVVTPHQPRLDWQMWFAALGPHTQSPWFSSLLHRLLQGKADVVKLIQTDESQYPFSK 541
Query: 532 KAPAFLRAVSYKYVYTPANTKAT---QWWIRKREEEYFPEFEANHQPLIAYLTQFGILKK 588
+ P +LRA YKY ++ + +WW R EE++P + L L Q + K
Sbjct: 542 QPPVYLRAHRYKYWFSEPKADGSFPQRWWRRVYVEEFYPIVQLGDSYLEQMLVQHDLKDK 601
Query: 589 RKPEHIEPQVKDA-LDSIRKYTATADPAILLWSFFITGLAIIYL 631
P H+ + L + + +LLW+ FI+ + L
Sbjct: 602 APPRHVSKGLLPRFLRCVGDHVREIPAPLLLWTLFISAATLCLL 645
>UNIPROTKB|Q5ZKZ9 [details] [associations]
symbol:LMF2 "Lipase maturation factor 2" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
GO:GO:0016021 GO:GO:0005789 eggNOG:NOG81106 InterPro:IPR009613
Pfam:PF06762 CTD:91289 HOVERGEN:HBG108090 OrthoDB:EOG4W6NVR
EMBL:AJ719935 IPI:IPI00588576 RefSeq:NP_001026743.1
UniGene:Gga.22535 GeneID:429380 KEGG:gga:429380
HOGENOM:HOG000213150 NextBio:20830057 Uniprot:Q5ZKZ9
Length = 714
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 235/646 (36%), Positives = 341/646 (52%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
R LFL + Y+ AF SLY+QIPGL+G +GILPAR L L ++L PTLLWL
Sbjct: 9 RELFLAGLAAAYLAAFVSLYLQIPGLYGRDGILPARRVLRLSGK-GLWEQLRDVPTLLWL 67
Query: 63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
P +GL TE M+++ L+G + + F L Y SL+QVGQ F+ FQW
Sbjct: 68 GPQLGLDTEQGMELLCLLGAVASMGALLCAPLRDCLLFAVLRVFYLSLYQVGQVFLYFQW 127
Query: 123 DTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDP 182
D+LLLE GFL ++V+P + K S P D V FWLVRWLLFRL+ S + KL+S P
Sbjct: 128 DSLLLEAGFLAVLVAPLRLFKWRSTAWR-PHDSVTFWLVRWLLFRLMFASGVVKLTSRCP 186
Query: 183 SWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKGAKK 242
+WW L AL H+++ +PTP AWY+H LP WF + + + E + +
Sbjct: 187 TWWGLTALTYHYETQCIPTPAAWYAHQLPVWFQKFSVVATYVIEIAVPLLFFMPIRRLRL 246
Query: 243 IAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKXXXXXXXXXXX 302
AFY Q+ LQ+ II TGN+N++N LTI L SLLD+ + + R K K
Sbjct: 247 FAFYCQVLLQILIILTGNYNFFNALTIVLAFSLLDEEHMGRWMGRGKRKHGSSAWPPTLL 306
Query: 303 XXFGATV-FAFYKL--------FGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLG 353
+ A Y L F +++D + ++S++ F+ ++ +L + + LG
Sbjct: 307 SFLSTLLELATYALLLYWSVHYFSLEIDWEKGLLESKVAFTYHEFTQWLRAVTLPLVGLG 366
Query: 354 LASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTL 413
S +AL+ KL + + + + ++ +F+I+ VP + N L
Sbjct: 367 FLSLSWEILSALYRCACVRGFFWKLWATLQWAVFATATVGMFAISLVPFTYIDYESNGKL 426
Query: 414 HPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVN 473
P + + + N Y LFR MTGV GRPEV++EG+ ++Q WTEI F YKPGNV+
Sbjct: 427 WPGIHQMFSAVERFQVVNSYGLFRRMTGVGGRPEVVLEGSYDKQS-WTEIEFMYKPGNVS 485
Query: 474 RTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLL--DSTHYPFKA 531
VAPHQPRLDWQMWFAAL + +PW +S +R+L + +V+ L+ D YPF
Sbjct: 486 AAPAVVAPHQPRLDWQMWFAALAHHSSSPWFASFVHRLLQGKEDVIRLVQVDEDKYPFST 545
Query: 532 KAPAFLRAVSYKYVYT---PANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKK 588
+ P +LRA YKY +T + A QWW R+ +E+FP L L Q G LK
Sbjct: 546 QPPVYLRAQLYKYWFTHSAESGAGAAQWWRRQHVQEFFPTVSVGDPTLDGLLAQHG-LKD 604
Query: 589 RKP--EHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLR 632
+ P ++ + L S+R+ + P ++LWS ++ LR
Sbjct: 605 KLPLKRPVDAFLPWLLSSVRQLSRPFSPHVVLWSLYVVAATTCLLR 650
>ZFIN|ZDB-GENE-070206-11 [details] [associations]
symbol:lmf2b "lipase maturation factor 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-070206-11 GeneTree:ENSGT00530000063702
InterPro:IPR009613 Pfam:PF06762 EMBL:CU861462 IPI:IPI00513363
RefSeq:NP_001136035.1 UniGene:Dr.17394 Ensembl:ENSDART00000030738
GeneID:407708 KEGG:dre:407708 CTD:407708 NextBio:20818566
Uniprot:F1Q4Q4
Length = 713
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 221/650 (34%), Positives = 336/650 (51%)
Query: 3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
R FL SI L+Y AFAS+Y+QIPGL+GD GILP R Q+ + PL ++L P+LLWL
Sbjct: 8 RKWFLSSIALIYACAFASVYVQIPGLYGDEGILPVRLQMPKMQR-PLLEQLQASPSLLWL 66
Query: 63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
P +GL + ++++I L+G+ L+ + + LW+LY SL+ VG F+ +W
Sbjct: 67 GPSLGLEPQQVLELICLLGVLLSLGAVLLGTLRDSLTYLCLWALYLSLYNVGGDFLHSEW 126
Query: 123 DTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDP 182
D LLLE GFL ++V+P G+ + SR D + FW++RWL FRL ++ ++KL++GDP
Sbjct: 127 DVLLLEAGFLAVLVAPLGLLRSHSRHAFH--DSLTFWMIRWLFFRLTFSTGVSKLATGDP 184
Query: 183 SWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX-XKGAK 241
+W+ L AL H + PT LAWY H LP W L+L L + + +
Sbjct: 185 AWYDLSALSHHLEDQMSPTLLAWYVHQLPEWLLKLGAVVMLHSGICIPLLTFFAPIRRLR 244
Query: 242 KIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFY-PDLNRKKNKXXXXXXXXX 300
FY QLFLQL I TGN + NLL+IAL SLLDD +F P RK +
Sbjct: 245 LFGFYVQLFLQLFHILTGNCSLLNLLSIALSFSLLDDDHFNTPSKKRKGQEKKTRSWLQT 304
Query: 301 XXXXF----GATVFAF--YK---LFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALY 351
F V+AF Y L+ +++D + V ++ FS ++ ++ L ++
Sbjct: 305 LASGFVLLVELAVYAFILYSAITLYQLQIDWEQKRVSAKTDFSHGRFAAFVLHIQELTIW 364
Query: 352 LGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNK 411
+G+ SF A A+ + T + KL SL+ + ++ +F+++ VP + L +
Sbjct: 365 VGVLSFTWEAVNAMLKCLCTRGIVSKLWSLIQWALVTAAAVAVFALSVVPYSTLPGMSST 424
Query: 412 TLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGN 471
T+ P V + + H+ Y + +GRPE+I+EG+ + WTE+ YKPG+
Sbjct: 425 TVFPKVLDLYRAVEKFHLVGAYGVQHRPISTEGRPEIILEGSYDGL-TWTEMNPMYKPGD 483
Query: 472 VNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLL--DSTHYPF 529
VN P PHQPRL+ M+ A + NPW + L R+L + +V+ LL D YPF
Sbjct: 484 VNDIPPVAGPHQPRLESMMFQATQKGHDHNPWFAGLLQRLLQGKADVIGLLQVDEAQYPF 543
Query: 530 KAKAPAFLRAVSYKYVYT-PANTKATQ--WWIRKREEEYFPEFEANHQPLIAYLTQFGIL 586
K PA ++A Y Y +T P K Q WW R+ ++E+ P + L L + G L
Sbjct: 544 SQKPPALIKAKLYHYHFTDPVKDKTHQKAWWRRQYKKEFSPAVNLDDPKLNRLLDESG-L 602
Query: 587 KKRKPEHIEPQVKDALDS----IRKYTATADPAILLWSFFITGLAIIYLR 632
K++ P I+P L IR A+++ S T +I +R
Sbjct: 603 KEKFP--IQPATDTPLSQTLILIRDPIKHLSGALVISSLLATVASIFLIR 650
>WB|WBGene00019657 [details] [associations]
symbol:K11G12.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:FO081325
GeneTree:ENSGT00530000063702 InterPro:IPR009613 Pfam:PF06762
HOGENOM:HOG000019333 OMA:LYTQIPG GeneID:180941
KEGG:cel:CELE_K11G12.6 UCSC:K11G12.6b CTD:180941 NextBio:911662
RefSeq:NP_001041274.2 EnsemblMetazoa:K11G12.6b WormBase:K11G12.6b
InParanoid:Q2L6Y0 ArrayExpress:Q2L6Y0 Uniprot:Q2L6Y0
Length = 624
Score = 424 (154.3 bits), Expect = 8.4e-70, Sum P(2) = 8.4e-70
Identities = 89/250 (35%), Positives = 139/250 (55%)
Query: 373 SKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLH--PMVKSWHGQLAHLHIS 430
S+ G++ V +F + + L + +PL + + + + P+V + + + ++
Sbjct: 355 SQNGRMKKWVHLAFVLCSVLFLGVYGNIPLLRMDEKLAQRTYEPPVVMTMYKTVNSWSVA 414
Query: 431 NPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQM 490
N Y +R MTG GRPE++IEG+ + +GPW EI F KPG V++ F++PH PRLD QM
Sbjct: 415 NSYGSYRQMTGTHGRPEIVIEGSHHIEGPWREIEFTSKPGKVSKRPRFISPHHPRLDMQM 474
Query: 491 WFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKA-PA-FLRAVSYKYVYTP 548
++AA GTY QNP+ SL Y ++ + EV++L++ YPFK ++ P F RA Y Y +T
Sbjct: 475 YYAAEGTYQQNPFFLSLVYHLMQNTTEVVNLIED--YPFKNRSEPMRFARAKLYMYHFTD 532
Query: 549 ANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKY 608
K WW R +EEY P F + L+ YLT+ I+ KRK E + + L +
Sbjct: 533 IGDK--NWWTRSFQEEYMPTFNKGNDALLNYLTEHKIINKRKSEFVNGPLGKYLKQCHRL 590
Query: 609 TATADPAILL 618
TA D L+
Sbjct: 591 TAGIDEIALI 600
Score = 336 (123.3 bits), Expect = 8.4e-70, Sum P(2) = 8.4e-70
Identities = 86/268 (32%), Positives = 133/268 (49%)
Query: 12 LVYVF-AFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLST 70
L+ +F AF+S+Y QI GLFG+ G++P LE +E +L P L + + LS
Sbjct: 18 LIVLFTAFSSIYPQIHGLFGERGLVPVAPMLECEEESIFQCRL---PLLRSVCQILHLSP 74
Query: 71 EYMMDVISLVGIFLAFTGFVSQKFCCKP--NFFALWSLYYSLFQVGQTFMSFQWDTLLLE 128
+ LVG+FL+ F K C+ + L+ LY ++++ G FM +QWD LLLE
Sbjct: 75 SVGLQAFCLVGLFLS--AFAIYKPRCQNIITYLILYLLYRTIYEAGGVFMYYQWDALLLE 132
Query: 129 TGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLK 188
+ I++ F + P+D + + + LL R++ + KL S P+WW L
Sbjct: 133 STVYVAILAWFD---------NGPADSIALFGIVSLLLRVVFMNGATKLLSKCPTWWNLT 183
Query: 189 ALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKGAKKIAFYFQ 248
AL HF+S LPTP AWY+H+ P +F +L T E + F+ Q
Sbjct: 184 ALNYHFESQPLPTPFAWYAHYFPQFFKQLATLQMNFIEILLPPLFLIPLIHVRYFVFFCQ 243
Query: 249 LFLQLTIIATGNFNWYNLLTIALCLSLL 276
+ L + TGN ++N + L +SLL
Sbjct: 244 VLLTTLTLFTGNNGFFNYNILVLMVSLL 271
>MGI|MGI:1923733 [details] [associations]
symbol:Lmf1 "lipase maturation factor 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0009306 "protein
secretion" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0033578
"protein glycosylation in Golgi" evidence=IMP] [GO:0034382
"chylomicron remnant clearance" evidence=IMP] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IMP;IDA]
[GO:0051604 "protein maturation" evidence=IDA] [GO:0090181
"regulation of cholesterol metabolic process" evidence=IMP]
[GO:0090207 "regulation of triglyceride metabolic process"
evidence=IMP] MGI:MGI:1923733 GO:GO:0016021 GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 GO:GO:0051006 GO:GO:0090181
GO:GO:0006888 GO:GO:0051604 GO:GO:0034382 GO:GO:0090207
GO:GO:0033578 CTD:64788 eggNOG:NOG81106
GeneTree:ENSGT00530000063702 HOGENOM:HOG000242315
HOVERGEN:HBG101974 OrthoDB:EOG43FGWS InterPro:IPR009613
Pfam:PF06762 EMBL:AK010312 EMBL:AK035119 EMBL:AK041659
EMBL:AK154622 EMBL:AK169983 EMBL:BC020104 IPI:IPI00405437
IPI:IPI00828587 IPI:IPI00828677 IPI:IPI00828922 RefSeq:NP_083900.3
UniGene:Mm.12787 ProteinModelPortal:Q3U3R4 STRING:Q3U3R4
PhosphoSite:Q3U3R4 PaxDb:Q3U3R4 PRIDE:Q3U3R4
Ensembl:ENSMUST00000116641 GeneID:76483 KEGG:mmu:76483
UCSC:uc008bbe.2 UCSC:uc008bbf.2 InParanoid:Q3U3R4 NextBio:345228
Bgee:Q3U3R4 CleanEx:MM_LMF1 Genevestigator:Q3U3R4 Uniprot:Q3U3R4
Length = 574
Score = 360 (131.8 bits), Expect = 8.3e-53, Sum P(2) = 8.3e-53
Identities = 90/283 (31%), Positives = 144/283 (50%)
Query: 2 TRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEG-DESLPLSKKLHR---KP 57
TR + LR++ +Y AF + Q L GD G+LP + L+ E S P
Sbjct: 52 TRIVLLRALAFIYFVAFLVAFNQNKALIGDRGLLPCKLYLKNVQEYFQGSTGWAAWTYAP 111
Query: 58 TLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFF-ALWSLYYSLFQVGQT 116
T++WL + ++ + +D+I+L+G L + FV C ALW+LY SL VGQ
Sbjct: 112 TIMWLLDWSDMN--FNLDLIALLG--LGISSFVLVTGCANMILMTALWALYMSLVNVGQI 167
Query: 117 FMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINK 176
+ SF W++ LLETGFL I +SP S ++P+ Q+ W RWL+FR+++ + + K
Sbjct: 168 WYSFGWESQLLETGFLGIFLSPLWTL--SRLPKNTPTSQIVLWGFRWLIFRIMLGAGLIK 225
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
+ GD W L + H+++ +P P+A+Y H P WF R T + E
Sbjct: 226 VR-GDKCWLDLTCMDFHYETQPVPNPIAYYLHRSPWWFHRFETLSNHFVELLVPFFLFLG 284
Query: 237 XKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
+ + + Q+ Q+ +I +GN ++ N LTI L+ DD+
Sbjct: 285 RR-MRILHGVLQILFQVILIISGNLSFLNWLTIVPSLACFDDA 326
Score = 252 (93.8 bits), Expect = 8.3e-53, Sum P(2) = 8.3e-53
Identities = 61/150 (40%), Positives = 81/150 (54%)
Query: 427 LHISNPYALFRVMTGVDGRPEVIIEG--AQNRQGP---WTEIPFRYKPGNVNRTLPFVAP 481
L I N Y F +T R EVI++G + N P W + F+ KPG+ R ++P
Sbjct: 402 LRIVNTYGAFGSVT--KERTEVILQGTVSPNASAPDAVWEDYEFKCKPGDPWRQPCLISP 459
Query: 482 HQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPA-FLRAV 540
+ RLDW MWFAA TY QN WI LA ++L E L+LL PF+ + P ++R
Sbjct: 460 YHYRLDWLMWFAAFQTYEQNEWILHLAGKLLAGDSEALALLAVN--PFEGRTPPRWIRGE 517
Query: 541 SYKYVYT-PANTKATQ--WWIRKREEEYFP 567
Y+Y ++ P ATQ WWIRKR YFP
Sbjct: 518 HYRYKFSLPGGQHATQGKWWIRKRIGPYFP 547
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 346 LILALYLGLASFI-VTAT------TALWDTMRTPSKLGKL 378
LI L LG++SF+ VT TALW + +G++
Sbjct: 128 LIALLGLGISSFVLVTGCANMILMTALWALYMSLVNVGQI 167
>UNIPROTKB|Q96S06 [details] [associations]
symbol:LMF1 "Lipase maturation factor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0009306
"protein secretion" evidence=IEA] [GO:0033578 "protein
glycosylation in Golgi" evidence=IEA] [GO:0034382 "chylomicron
remnant clearance" evidence=IEA] [GO:0051006 "positive regulation
of lipoprotein lipase activity" evidence=IEA] [GO:0051604 "protein
maturation" evidence=IEA] [GO:0090181 "regulation of cholesterol
metabolic process" evidence=IEA] [GO:0090207 "regulation of
triglyceride metabolic process" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] GO:GO:0016021
GO:GO:0005794 GO:GO:0005789 GO:GO:0009306 GO:GO:0051006
GO:GO:0090181 GO:GO:0006888 GO:GO:0051604 GO:GO:0034382
Orphanet:411 GO:GO:0090207 GO:GO:0033578 EMBL:AE006465 CTD:64788
eggNOG:NOG81106 HOGENOM:HOG000242315 HOVERGEN:HBG101974 OMA:NFAWLNW
OrthoDB:EOG43FGWS InterPro:IPR009613 Pfam:PF06762 EMBL:AK022743
EMBL:AK025955 EMBL:AB075873 EMBL:BC010738 IPI:IPI00304223
RefSeq:NP_073610.2 UniGene:Hs.732776 ProteinModelPortal:Q96S06
STRING:Q96S06 PhosphoSite:Q96S06 DMDM:74717262 PRIDE:Q96S06
DNASU:64788 Ensembl:ENST00000262301 GeneID:64788 KEGG:hsa:64788
UCSC:uc002ckk.2 GeneCards:GC16M000903 HGNC:HGNC:14154 HPA:HPA018147
MIM:246650 MIM:611761 neXtProt:NX_Q96S06 PharmGKB:PA25540
InParanoid:Q96S06 ChiTaRS:LMF1 GenomeRNAi:64788 NextBio:66846
ArrayExpress:Q96S06 Bgee:Q96S06 CleanEx:HS_LMF1
Genevestigator:Q96S06 Uniprot:Q96S06
Length = 567
Score = 348 (127.6 bits), Expect = 2.1e-52, Sum P(2) = 2.1e-52
Identities = 88/283 (31%), Positives = 140/283 (49%)
Query: 2 TRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKK----LHRKP 57
TR + L+++ VY AF + Q L GD G+LP R L+ + + P
Sbjct: 52 TRIVLLKALAFVYFVAFLVAFHQNKQLIGDRGLLPCRVFLKNFQQYFQDRTSWEVFSYMP 111
Query: 58 TLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFA-LWSLYYSLFQVGQT 116
T+LWL + +++ +D+++L+G L + FV C A LW LY SL VG
Sbjct: 112 TILWLMDWSDMNSN--LDLLALLG--LGISSFVLITGCANMLLMAALWGLYMSLVNVGHV 167
Query: 117 FMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINK 176
+ SF W++ LLETGFL I + P S +P+ ++ W RWL+FR+++ + + K
Sbjct: 168 WYSFGWESQLLETGFLGIFLCPLWTL--SRLPQHTPTSRIVLWGFRWLIFRIMLGAGLIK 225
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
+ GD W L + H+++ +P P+A+Y HH P WF R T + E
Sbjct: 226 IR-GDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLG 284
Query: 237 XKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
+ A I Q+ Q +I +GN ++ N LT+ L+ DD+
Sbjct: 285 RR-ACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDA 326
Score = 262 (97.3 bits), Expect = 2.1e-52, Sum P(2) = 2.1e-52
Identities = 60/150 (40%), Positives = 81/150 (54%)
Query: 427 LHISNPYALFRVMTGVDGRPEVIIEG--AQNRQGP---WTEIPFRYKPGNVNRTLPFVAP 481
LHI N Y F +T R EVI++G + N P W + F+ KPG+ +R ++P
Sbjct: 400 LHIVNTYGAFGSIT--KERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISP 457
Query: 482 HQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPA-FLRAV 540
+ RLDW MWFAA TY N WI LA ++L E LSLL H PF + P ++R
Sbjct: 458 YHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLL--AHNPFAGRPPPRWVRGE 515
Query: 541 SYKYVYT-PANTKATQ--WWIRKREEEYFP 567
Y+Y ++ P A + WW+RKR YFP
Sbjct: 516 HYRYKFSRPGGRHAAEGKWWVRKRIGAYFP 545
>UNIPROTKB|E1C1X8 [details] [associations]
symbol:E1C1X8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0009306 "protein secretion" evidence=IEA] [GO:0033578 "protein
glycosylation in Golgi" evidence=IEA] [GO:0034382 "chylomicron
remnant clearance" evidence=IEA] [GO:0051006 "positive regulation
of lipoprotein lipase activity" evidence=IEA] [GO:0051604 "protein
maturation" evidence=IEA] [GO:0090181 "regulation of cholesterol
metabolic process" evidence=IEA] [GO:0090207 "regulation of
triglyceride metabolic process" evidence=IEA] GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 GO:GO:0051006 GO:GO:0090181
GO:GO:0006888 GO:GO:0051604 GO:GO:0090207 GO:GO:0033578
GeneTree:ENSGT00530000063702 InterPro:IPR009613 Pfam:PF06762
EMBL:AADN02023685 EMBL:AADN02023686 EMBL:AADN02023687
EMBL:AADN02023688 EMBL:AADN02023689 EMBL:AADN02023690
IPI:IPI00575697 Ensembl:ENSGALT00000008468 OMA:VITSCAN
Uniprot:E1C1X8
Length = 571
Score = 341 (125.1 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 87/280 (31%), Positives = 137/280 (48%)
Query: 5 LFLRSICLVY-VFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSK----KLHRKPTL 59
+ LR++ LVY V AF Y Q L G+ G+LP + L+ + K L PT+
Sbjct: 60 VLLRAVALVYLVVAFLVAYHQNKQLIGEKGLLPCKLYLQNVKKYFKGKINLDALSYAPTI 119
Query: 60 LWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFA-LWSLYYSLFQVGQTFM 118
+W + + + ++D ISL+G L + FV C A LW LY SL VGQ +
Sbjct: 120 IWFLDWSDMDS--ILDYISLLG--LVISAFVLITGCANMVLMAVLWVLYLSLVNVGQIWY 175
Query: 119 SFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLS 178
SF W++ LLETGFL + + P R S+P + W RWL+FR+++ + + K+
Sbjct: 176 SFGWESQLLETGFLGMFLCPLWTLSRLPR--STPPSSIVIWGFRWLIFRIMLGAGLIKIR 233
Query: 179 SGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXK 238
D W L + H+++ +P P+A++ H P WF + T F+ E K
Sbjct: 234 E-DHCWRDLTCMNYHYETQPVPNPIAYFMHRSPGWFHQFETLFNHFIELVVPFFIFMGRK 292
Query: 239 GAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDD 278
+ Q+ Q+ +I +GN ++ N LTI ++ DD
Sbjct: 293 MCM-VHGVLQILFQVLLIISGNLSFLNWLTIVPSIACFDD 331
Score = 259 (96.2 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 62/150 (41%), Positives = 84/150 (56%)
Query: 427 LHISNPYALFRVMTGVDGRPEVIIEGAQNRQ--GP---WTEIPFRYKPGNVNRTLPFVAP 481
L I N Y F +T R EVI++G + P W E F+ KPG++ R F++P
Sbjct: 404 LRIVNTYGAFGSIT--KERTEVILQGTSSPDPNDPAAVWQEFDFKCKPGDLWRRPCFISP 461
Query: 482 HQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAK-APAFLRAV 540
+ RLDW MWFAA TY QN WI LA ++L + E LSL+ +T+ PF K P ++R
Sbjct: 462 YHYRLDWLMWFAAFQTYEQNEWIIHLAGKLLAQEEEALSLI-ATN-PFAGKDPPRWIRGE 519
Query: 541 SYKYVYT-PANTKATQ--WWIRKREEEYFP 567
+KY ++ P A + WWIRKR YFP
Sbjct: 520 HFKYKFSKPGGAHAAEGKWWIRKRIGPYFP 549
>UNIPROTKB|Q0P5C0 [details] [associations]
symbol:LMF1 "Lipase maturation factor 1" species:9913 "Bos
taurus" [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0090207 "regulation of triglyceride metabolic process"
evidence=IEA] [GO:0090181 "regulation of cholesterol metabolic
process" evidence=IEA] [GO:0051604 "protein maturation"
evidence=IEA] [GO:0051006 "positive regulation of lipoprotein
lipase activity" evidence=IEA] [GO:0034382 "chylomicron remnant
clearance" evidence=IEA] [GO:0033578 "protein glycosylation in
Golgi" evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] GO:GO:0016021 GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 GO:GO:0051006 GO:GO:0090181
GO:GO:0006888 GO:GO:0051604 GO:GO:0034382 GO:GO:0090207
GO:GO:0033578 EMBL:BC120253 IPI:IPI00711283 RefSeq:NP_001068658.1
UniGene:Bt.44828 PRIDE:Q0P5C0 Ensembl:ENSBTAT00000004206
GeneID:505124 KEGG:bta:505124 CTD:64788 eggNOG:NOG81106
GeneTree:ENSGT00530000063702 HOGENOM:HOG000242315
HOVERGEN:HBG101974 InParanoid:Q0P5C0 OMA:NFAWLNW OrthoDB:EOG43FGWS
NextBio:20866991 ArrayExpress:Q0P5C0 InterPro:IPR009613
Pfam:PF06762 Uniprot:Q0P5C0
Length = 561
Score = 345 (126.5 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 90/285 (31%), Positives = 140/285 (49%)
Query: 2 TRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESL---PLS-KKLHRKP 57
TR + LR++ VY AF + Q L GD G+LP R+ L+ + +S L P
Sbjct: 45 TRIVLLRALAFVYFVAFLVAFHQNKQLIGDRGLLPCRAYLQSVQRHFGGRVSWDALSYAP 104
Query: 58 TLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFA-LWSLYYSLFQVGQT 116
T+LWL + + +D ++L+G L + F+ C A LW LY SL VGQ
Sbjct: 105 TILWLLDWSHMDAN--LDALALLG--LGISSFILVSGCANMVLMAALWVLYMSLVNVGQI 160
Query: 117 FMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINK 176
+ SF W++ LLETGFL I + P R +P+ V W RWL+FR+++ + + K
Sbjct: 161 WYSFGWESQLLETGFLGIFLCPLWTLSALPR--GTPTSWVVMWGFRWLIFRIMLGAGLIK 218
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
+ GD W L + H+++ +P P+A++ H P WF R T L+
Sbjct: 219 IR-GDRCWRDLTCMDFHYETQPVPNPVAYFLHRSPWWFHRFET---LSNHFLELVVPFFI 274
Query: 237 XKGAKKIAFY--FQLFLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
G + + Q+ Q+ +I +GN ++ N LTI L+ DD+
Sbjct: 275 FLGRRMCIVHGALQVLFQVVLIISGNLSFLNWLTIVPSLACFDDA 319
Score = 251 (93.4 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 65/184 (35%), Positives = 91/184 (49%)
Query: 407 PAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEG--AQNRQGP---WT 461
P V L P + + L I N Y F +T R EVI++G + N P W
Sbjct: 375 PVVLNLLSPR-QVMNSSFNPLRIVNTYGAFGSITRE--RTEVILQGTASANASAPDSAWE 431
Query: 462 EIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSL 521
+ F+ KPG+ R ++P+ RLDW MWFAA TY N WI LA ++L + + LSL
Sbjct: 432 DYEFKCKPGDPRRRPCLISPYHHRLDWLMWFAAFQTYEHNEWIIHLAGKLLANDAQALSL 491
Query: 522 LDSTHYPFKAK-APAFLRAVSYKYVYT-PANTKATQ--WWIRKREEEYFPEFEANHQPLI 577
L PF+ + P ++R Y+Y ++ P A + WWIR+R YFP + Q L
Sbjct: 492 L--ARNPFEGRDPPRWVRGEHYRYKFSRPGGRHAAEGKWWIRRRLGPYFPPL--SRQDLR 547
Query: 578 AYLT 581
Y T
Sbjct: 548 GYFT 551
>DICTYBASE|DDB_G0287645 [details] [associations]
symbol:DDB_G0287645 "DUF1222 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0287645 EMBL:AAFI02000103 eggNOG:NOG81106
InterPro:IPR009613 Pfam:PF06762 RefSeq:XP_637151.1
EnsemblProtists:DDB0238347 GeneID:8626246 KEGG:ddi:DDB_G0287645
Uniprot:Q54K13
Length = 771
Score = 335 (123.0 bits), Expect = 9.6e-47, Sum P(3) = 9.6e-47
Identities = 89/279 (31%), Positives = 143/279 (51%)
Query: 5 LFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAP 64
+FL+ I ++ A S +IQI GL G++GILP LE + S +++ + + P
Sbjct: 48 IFLKMISIITFIALFSAFIQIRGLVGEDGILPVGDILEKQVA---SNEIN-SIWIFFTHP 103
Query: 65 F--IGLSTEYMMDVISLVGI-FLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQ 121
+G S + ++ VG+ F A + F + +W YY + VGQ F ++Q
Sbjct: 104 TKGMGFSVNNTLHMLCFVGLSFSALSIFTTT---IATYIGVMWFCYYCIVDVGQLFFAYQ 160
Query: 122 WDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGD 181
WD LLLE +L I +SPF N K ++P +++ L++WLLFRL+ S + KL+
Sbjct: 161 WDQLLLEALYLAIFLSPF--NPKYEEKPNTP---IRY-LLKWLLFRLMFGSGLVKLT--- 211
Query: 182 PSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKGAK 241
P W L+A+ +++ +P L+WY + +P F T LA E + K
Sbjct: 212 PIWAGLQAMNFQYETQCIPNILSWYLNQMPHVFHEFETMMVLAIEILLPALYFAP-RMYK 270
Query: 242 KIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSY 280
A + Q+ I TGN+N++N LTI LC L+DD++
Sbjct: 271 LFASLTTVLYQMAIFLTGNYNFFNYLTIGLCTLLMDDAF 309
Score = 178 (67.7 bits), Expect = 9.6e-47, Sum P(3) = 9.6e-47
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 388 IVTSLLIFSINTVPLANLHPAVNKTLHP-MVKSWHGQLAHLHISNPYALFRVMTGVDGRP 446
++ + I T L N+ K P +++ H L+ H++ Y LF + R
Sbjct: 357 LLVPFVFILIGTSSLVNVTQYFQKQTTPSLIQRIHSTLSLYHLTGTYGLFSHVN--TERY 414
Query: 447 EVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAP-HQPRLDWQMWFAALGT 497
E+IIEG+ ++ W F YKPGN++R PFV P HQPRLDWQMW A T
Sbjct: 415 EIIIEGSYDKTN-WFAYEFYYKPGNLSRHPPFVFPGHQPRLDWQMWSIAQTT 465
Score = 95 (38.5 bits), Expect = 9.6e-47, Sum P(3) = 9.6e-47
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 500 QNPWISSLAYRILTHQPEVLSLLDSTHYPFKA-KAPAFLRAVSYKYVYTPANTK 552
Q+ W+ + ++L PEVLSLL+ + PF K P ++RA Y+Y +T N +
Sbjct: 515 QSKWVINFMIKLLQGSPEVLSLLE--YSPFTTDKPPIYIRAQKYRYKFTTFNNE 566
>UNIPROTKB|H3BVI4 [details] [associations]
symbol:LMF1 "Lipase maturation factor 1" species:9606 "Homo
sapiens" [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0009306
"protein secretion" evidence=IEA] [GO:0033578 "protein
glycosylation in Golgi" evidence=IEA] [GO:0034382 "chylomicron
remnant clearance" evidence=IEA] [GO:0051006 "positive regulation
of lipoprotein lipase activity" evidence=IEA] [GO:0051604 "protein
maturation" evidence=IEA] [GO:0090181 "regulation of cholesterol
metabolic process" evidence=IEA] [GO:0090207 "regulation of
triglyceride metabolic process" evidence=IEA] GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 EMBL:CH471112 GO:GO:0051006
GO:GO:0090181 GO:GO:0006888 GO:GO:0051604 GO:GO:0034382
GO:GO:0090207 EMBL:AC009041 GO:GO:0033578 InterPro:IPR009613
Pfam:PF06762 UniGene:Hs.732776 HGNC:HGNC:14154 ChiTaRS:LMF1
EMBL:AL008727 EMBL:AL031008 EMBL:AL031716 EMBL:Z93041
Ensembl:ENST00000568897 Uniprot:H3BVI4
Length = 350
Score = 262 (97.3 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 60/150 (40%), Positives = 81/150 (54%)
Query: 427 LHISNPYALFRVMTGVDGRPEVIIEG--AQNRQGP---WTEIPFRYKPGNVNRTLPFVAP 481
LHI N Y F +T R EVI++G + N P W + F+ KPG+ +R ++P
Sbjct: 183 LHIVNTYGAFGSIT--KERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISP 240
Query: 482 HQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPA-FLRAV 540
+ RLDW MWFAA TY N WI LA ++L E LSLL H PF + P ++R
Sbjct: 241 YHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLL--AHNPFAGRPPPRWVRGE 298
Query: 541 SYKYVYT-PANTKATQ--WWIRKREEEYFP 567
Y+Y ++ P A + WW+RKR YFP
Sbjct: 299 HYRYKFSRPGGRHAAEGKWWVRKRIGAYFP 328
Score = 133 (51.9 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 180 GDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKG 239
GD W L + H+++ +P P+A+Y HH P WF R T + E +
Sbjct: 11 GDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRR- 69
Query: 240 AKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
A I Q+ Q +I +GN ++ N LT+ L+ DD+
Sbjct: 70 ACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDA 109
>UNIPROTKB|B3KS80 [details] [associations]
symbol:LA16c-360B4.1 "Lipase maturation factor 1"
species:9606 "Homo sapiens" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0009306 "protein secretion" evidence=IEA] [GO:0033578 "protein
glycosylation in Golgi" evidence=IEA] [GO:0034382 "chylomicron
remnant clearance" evidence=IEA] [GO:0051006 "positive regulation
of lipoprotein lipase activity" evidence=IEA] [GO:0051604 "protein
maturation" evidence=IEA] [GO:0090181 "regulation of cholesterol
metabolic process" evidence=IEA] [GO:0090207 "regulation of
triglyceride metabolic process" evidence=IEA] GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 EMBL:CH471112 GO:GO:0051006
GO:GO:0090181 GO:GO:0006888 GO:GO:0051604 GO:GO:0034382
GO:GO:0090207 EMBL:AC009041 GO:GO:0033578 CTD:64788
HOGENOM:HOG000242315 HOVERGEN:HBG101974 InterPro:IPR009613
Pfam:PF06762 RefSeq:NP_073610.2 UniGene:Hs.732776 DNASU:64788
GeneID:64788 KEGG:hsa:64788 HGNC:HGNC:14154 PharmGKB:PA25540
ChiTaRS:LMF1 GenomeRNAi:64788 NextBio:66846 EMBL:AL008727
EMBL:AL031008 EMBL:AL031716 EMBL:Z93041 EMBL:AK093050
IPI:IPI00646812 STRING:B3KS80 Ensembl:ENST00000543238
Uniprot:B3KS80
Length = 330
Score = 262 (97.3 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 60/150 (40%), Positives = 81/150 (54%)
Query: 427 LHISNPYALFRVMTGVDGRPEVIIEG--AQNRQGP---WTEIPFRYKPGNVNRTLPFVAP 481
LHI N Y F +T R EVI++G + N P W + F+ KPG+ +R ++P
Sbjct: 163 LHIVNTYGAFGSIT--KERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISP 220
Query: 482 HQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPA-FLRAV 540
+ RLDW MWFAA TY N WI LA ++L E LSLL H PF + P ++R
Sbjct: 221 YHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLL--AHNPFAGRPPPRWVRGE 278
Query: 541 SYKYVYT-PANTKATQ--WWIRKREEEYFP 567
Y+Y ++ P A + WW+RKR YFP
Sbjct: 279 HYRYKFSRPGGRHAAEGKWWVRKRIGAYFP 308
Score = 114 (45.2 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 190 LGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKGAKKIAFYFQL 249
+ H+++ +P P+A+Y HH P WF R T + E + A I Q+
Sbjct: 1 MDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRR-ACIIHGVLQI 59
Query: 250 FLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
Q +I +GN ++ N LT+ L+ DD+
Sbjct: 60 LFQAVLIVSGNLSFLNWLTMVPSLACFDDA 89
>RGD|1310180 [details] [associations]
symbol:Lmf1 "lipase maturation factor 1" species:10116 "Rattus
norvegicus" [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0009306 "protein secretion" evidence=ISO]
[GO:0033578 "protein glycosylation in Golgi" evidence=ISO]
[GO:0034382 "chylomicron remnant clearance" evidence=ISO]
[GO:0051006 "positive regulation of lipoprotein lipase activity"
evidence=ISO] [GO:0051604 "protein maturation" evidence=ISO]
[GO:0090181 "regulation of cholesterol metabolic process"
evidence=ISO] [GO:0090207 "regulation of triglyceride metabolic
process" evidence=ISO] RGD:1310180 GeneTree:ENSGT00530000063702
InterPro:IPR009613 Pfam:PF06762 IPI:IPI00650133
Ensembl:ENSRNOT00000066887 UCSC:RGD:1310180 ArrayExpress:F1M5Z6
Uniprot:F1M5Z6
Length = 357
Score = 250 (93.1 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 61/150 (40%), Positives = 79/150 (52%)
Query: 427 LHISNPYALFRVMTGVDGRPEVIIEGAQN--RQGP---WTEIPFRYKPGNVNRTLPFVAP 481
L I N Y F +T R EVI++G N P W + F+ KPG+ R ++P
Sbjct: 184 LRIVNTYGAFGSIT--KERTEVILQGTANPNASAPDAVWEDYEFKCKPGDPWRRPCLISP 241
Query: 482 HQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPA-FLRAV 540
+ RLDW MWFAA TY QN WI L ++L E LSLL PF+ +AP ++R
Sbjct: 242 YHYRLDWLMWFAAFQTYEQNEWIIHLTGKLLADDAEALSLLALN--PFEGRAPPRWIRGE 299
Query: 541 SYKYVYT-PANTKATQ--WWIRKREEEYFP 567
Y+Y ++ P A Q WWIRKR YFP
Sbjct: 300 HYRYKFSLPGGQHAAQGKWWIRKRIGPYFP 329
Score = 133 (51.9 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 180 GDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKG 239
GD W L + H+++ +P P+A+Y H P WF R T L+ G
Sbjct: 10 GDKCWLDLTCMDFHYETQPVPNPMAYYLHRSPRWFHRFET---LSNHFLELLVPFFLFLG 66
Query: 240 AKKIAFY--FQLFLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
+ + Q+ Q+ +I +GN ++ N LTI L+ DD+
Sbjct: 67 RRMCVLHGVLQILFQVVLIISGNLSFLNWLTIVPSLACFDDA 108
>UNIPROTKB|F1RG34 [details] [associations]
symbol:LMF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090207 "regulation of triglyceride metabolic process"
evidence=IEA] [GO:0090181 "regulation of cholesterol metabolic
process" evidence=IEA] [GO:0051604 "protein maturation"
evidence=IEA] [GO:0051006 "positive regulation of lipoprotein
lipase activity" evidence=IEA] [GO:0034382 "chylomicron remnant
clearance" evidence=IEA] [GO:0033578 "protein glycosylation in
Golgi" evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 GO:GO:0051006 GO:GO:0090181
GO:GO:0006888 GO:GO:0051604 GO:GO:0034382 GO:GO:0090207
GO:GO:0033578 GeneTree:ENSGT00530000063702 InterPro:IPR009613
Pfam:PF06762 EMBL:FP016225 Ensembl:ENSSSCT00000008777 OMA:QMMNTSF
Uniprot:F1RG34
Length = 331
Score = 254 (94.5 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 69/195 (35%), Positives = 97/195 (49%)
Query: 383 VTSFYIVTSLLIFSINTVPLANLH-PAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTG 441
V ++ V L+ V +A L P V L P + + L I N Y F +T
Sbjct: 120 VQTYGCVARRLVNLAMGVLIAGLSVPVVLNLLSPR-QIMNSSFHPLRIVNTYGAFGSIT- 177
Query: 442 VDGRPEVIIEG--AQNRQGP---WTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALG 496
R EVI++G + N P W + F+ KPG++ R ++P+ RLDW MWFAA
Sbjct: 178 -KERTEVILQGTASPNASAPDAEWKDYEFKCKPGDLRRRPCLISPYHYRLDWLMWFAAFQ 236
Query: 497 TYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPA-FLRAVSYKYVYT-PANTKAT 554
TY N WI LA ++L + + LSLL PF+ AP ++R Y+Y ++ P A
Sbjct: 237 TYEHNEWIIHLAGKLLANDAQALSLLGVN--PFEGTAPPRWVRGEHYRYKFSRPGGRHAA 294
Query: 555 Q--WWIRKREEEYFP 567
+ WWIRKR YFP
Sbjct: 295 EGKWWIRKRLGPYFP 309
Score = 100 (40.3 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 190 LGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXXKGAKKIAFY--F 247
+ H+++ +P P+A+ H P WF R T L+ G +
Sbjct: 1 MDFHYETQPVPNPMAYVLHRSPWWFHRFET---LSNHFLELVVPFFVFLGRSMCILHGAL 57
Query: 248 QLFLQLTIIATGNFNWYNLLTIALCLSLLDDS 279
Q+ Q+ +I +GN ++ N LTI L+ DD+
Sbjct: 58 QILFQVVLIVSGNLSFLNWLTIVPSLACFDDA 89
>UNIPROTKB|H3BN37 [details] [associations]
symbol:LMF1 "Lipase maturation factor 1" species:9606 "Homo
sapiens" [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0009306
"protein secretion" evidence=IEA] [GO:0033578 "protein
glycosylation in Golgi" evidence=IEA] [GO:0034382 "chylomicron
remnant clearance" evidence=IEA] [GO:0051006 "positive regulation
of lipoprotein lipase activity" evidence=IEA] [GO:0051604 "protein
maturation" evidence=IEA] [GO:0090181 "regulation of cholesterol
metabolic process" evidence=IEA] [GO:0090207 "regulation of
triglyceride metabolic process" evidence=IEA] GO:GO:0005794
GO:GO:0005789 GO:GO:0009306 GO:GO:0051006 GO:GO:0090181
GO:GO:0006888 GO:GO:0051604 GO:GO:0034382 GO:GO:0090207
EMBL:AC009041 GO:GO:0033578 InterPro:IPR009613 Pfam:PF06762
HGNC:HGNC:14154 ChiTaRS:LMF1 EMBL:AL008727 EMBL:AL031008
EMBL:AL031716 EMBL:Z93041 Ensembl:ENST00000570014 Bgee:H3BN37
Uniprot:H3BN37
Length = 198
Score = 275 (101.9 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 66/205 (32%), Positives = 104/205 (50%)
Query: 57 PTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFA-LWSLYYSLFQVGQ 115
PT+LWL + +++ +D+++L+G L + FV C A LW LY SL VG
Sbjct: 2 PTILWLMDWSDMNSN--LDLLALLG--LGISSFVLITGCANMLLMAALWGLYMSLVNVGH 57
Query: 116 TFMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPIN 175
+ SF W++ LLETGFL I + P S +P+ ++ W RWL+FR+++ + +
Sbjct: 58 VWYSFGWESQLLETGFLGIFLCPLWTL--SRLPQHTPTSRIVLWGFRWLIFRIMLGAGLI 115
Query: 176 KLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXX 235
K+ GD W L + H+++ +P P+A+Y HH P WF R T + E
Sbjct: 116 KIR-GDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFL 174
Query: 236 XXKGAKKIAFYFQLFLQLTIIATGN 260
+ A I Q+ Q +I +GN
Sbjct: 175 GRR-ACIIHGVLQILFQAVLIVSGN 198
>GENEDB_PFALCIPARUM|PFF0645c [details] [associations]
symbol:PFF0645c "integral membrane protein"
species:5833 "Plasmodium falciparum" [GO:0016021 "integral to
membrane" evidence=ISS] GO:GO:0016021 EMBL:AL844505
InterPro:IPR009613 Pfam:PF06762 RefSeq:XP_966120.2
ProteinModelPortal:C6KSX6 PRIDE:C6KSX6
EnsemblProtists:PFF0645c:mRNA GeneID:3885755 KEGG:pfa:PFF0645c
EuPathDB:PlasmoDB:PF3D7_0613300 ProtClustDB:CLSZ2431975
Uniprot:C6KSX6
Length = 1422
Score = 166 (63.5 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 63/284 (22%), Positives = 131/284 (46%)
Query: 1 YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEG--DE--SLPLSKKLHRK 56
YTR L + CL F+F + Q L G+NG+ PA++ ++ DE + + K
Sbjct: 67 YTRILLIS--CL---FSFIVSWNQNVALIGENGLTPAKNYVDKMFDELQNESIWVKFQNF 121
Query: 57 PTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQT 116
+L W P ++++ +++++++GI L+ + + ++ + S++ +G
Sbjct: 122 HSLFWFIP----ASDFNINLLAIIGIVLSCFSLLFN-YTNLVTLVPIYIILQSIYSIGNI 176
Query: 117 FMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINK 176
+ ++ ++ +LE FLC + PF N +K SP+ +K+ + R +F++++ + + +
Sbjct: 177 WFNYVYEIEILELLFLCFFLVPFCGNH--LKKRFSPTCLIKY-ICRCFVFKVLIGTSLIR 233
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
+ D W L +++ LPT ++ Y H +L F + TE
Sbjct: 234 FKNSD-LWGKLLGKYYLYETQPLPTSIS-YLFHSCITLSKLDNIFCILTECVFSFLILFP 291
Query: 237 XKGAKKI--AFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDD 278
+ + + + F ++ L I TGN + L IA + DD
Sbjct: 292 IRSFRLVGGSLIF-IYCILNFI-TGNSYLFYFLLIAPLMFCFDD 333
Score = 87 (35.7 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 40/159 (25%), Positives = 59/159 (37%)
Query: 421 HGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQ----GPWTEIPFRYKPGNVNRTL 476
+ Q I N Y F + R E++IEG Q+ + W F KP N+ + +
Sbjct: 673 NAQYGSFEIMNIYGSFGKIK--KNRKEILIEGTQSEKIDDNTTWHTYEFYCKPDNIYKNM 730
Query: 477 --------PFVAP-HQPRLDWQMWFAALG-----TYHQNPWISSLAYRILTHQPEVLSLL 522
F+ + RLDWQ F L T QN W + ++ + +LSLL
Sbjct: 731 CTQFRLLYNFIPVLYIDRLDWQ--FNTLSDKEDETILQNEWFKNFLIKLSNNDKNILSLL 788
Query: 523 DSTHYP----FKAKAPAFLRAVSYKYVYTPANTKATQWW 557
+ K FLR + Y + K WW
Sbjct: 789 YKNPFQNIKNINNKNTIFLRISNATYKFAKNGQK--NWW 825
Score = 44 (20.5 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 379 NSLVVTSFYIVTSLLIF 395
NS+V S Y +TS+L +
Sbjct: 548 NSIVTISIYPITSILFY 564
Score = 41 (19.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 379 NSLVVTSFYIVTSLLIFSINTVPLANLHP 407
N V +I+ SLLI N++ +++P
Sbjct: 529 NVSVEIFIHIICSLLIIIFNSIVTISIYP 557
>UNIPROTKB|C6KSX6 [details] [associations]
symbol:PFF0645c "Integral membrane protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016021 "integral to
membrane" evidence=ISS] GO:GO:0016021 EMBL:AL844505
InterPro:IPR009613 Pfam:PF06762 RefSeq:XP_966120.2
ProteinModelPortal:C6KSX6 PRIDE:C6KSX6
EnsemblProtists:PFF0645c:mRNA GeneID:3885755 KEGG:pfa:PFF0645c
EuPathDB:PlasmoDB:PF3D7_0613300 ProtClustDB:CLSZ2431975
Uniprot:C6KSX6
Length = 1422
Score = 166 (63.5 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 63/284 (22%), Positives = 131/284 (46%)
Query: 1 YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEG--DE--SLPLSKKLHRK 56
YTR L + CL F+F + Q L G+NG+ PA++ ++ DE + + K
Sbjct: 67 YTRILLIS--CL---FSFIVSWNQNVALIGENGLTPAKNYVDKMFDELQNESIWVKFQNF 121
Query: 57 PTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQT 116
+L W P ++++ +++++++GI L+ + + ++ + S++ +G
Sbjct: 122 HSLFWFIP----ASDFNINLLAIIGIVLSCFSLLFN-YTNLVTLVPIYIILQSIYSIGNI 176
Query: 117 FMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINK 176
+ ++ ++ +LE FLC + PF N +K SP+ +K+ + R +F++++ + + +
Sbjct: 177 WFNYVYEIEILELLFLCFFLVPFCGNH--LKKRFSPTCLIKY-ICRCFVFKVLIGTSLIR 233
Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXX 236
+ D W L +++ LPT ++ Y H +L F + TE
Sbjct: 234 FKNSD-LWGKLLGKYYLYETQPLPTSIS-YLFHSCITLSKLDNIFCILTECVFSFLILFP 291
Query: 237 XKGAKKI--AFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDD 278
+ + + + F ++ L I TGN + L IA + DD
Sbjct: 292 IRSFRLVGGSLIF-IYCILNFI-TGNSYLFYFLLIAPLMFCFDD 333
Score = 87 (35.7 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 40/159 (25%), Positives = 59/159 (37%)
Query: 421 HGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQ----GPWTEIPFRYKPGNVNRTL 476
+ Q I N Y F + R E++IEG Q+ + W F KP N+ + +
Sbjct: 673 NAQYGSFEIMNIYGSFGKIK--KNRKEILIEGTQSEKIDDNTTWHTYEFYCKPDNIYKNM 730
Query: 477 --------PFVAP-HQPRLDWQMWFAALG-----TYHQNPWISSLAYRILTHQPEVLSLL 522
F+ + RLDWQ F L T QN W + ++ + +LSLL
Sbjct: 731 CTQFRLLYNFIPVLYIDRLDWQ--FNTLSDKEDETILQNEWFKNFLIKLSNNDKNILSLL 788
Query: 523 DSTHYP----FKAKAPAFLRAVSYKYVYTPANTKATQWW 557
+ K FLR + Y + K WW
Sbjct: 789 YKNPFQNIKNINNKNTIFLRISNATYKFAKNGQK--NWW 825
Score = 44 (20.5 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 379 NSLVVTSFYIVTSLLIF 395
NS+V S Y +TS+L +
Sbjct: 548 NSIVTISIYPITSILFY 564
Score = 41 (19.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 379 NSLVVTSFYIVTSLLIFSINTVPLANLHP 407
N V +I+ SLLI N++ +++P
Sbjct: 529 NVSVEIFIHIICSLLIIIFNSIVTISIYP 557
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.443 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 661 620 0.00089 120 3 11 22 0.47 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 629 (67 KB)
Total size of DFA: 369 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 50.52u 0.10s 50.62t Elapsed: 00:01:02
Total cpu time: 50.53u 0.10s 50.63t Elapsed: 00:01:03
Start: Thu Aug 15 13:16:16 2013 End: Thu Aug 15 13:17:19 2013