Query psy10901
Match_columns 137
No_of_seqs 107 out of 1078
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 21:28:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fqi_A RGS9, regulator of G-pr 100.0 2.7E-35 9.2E-40 204.4 11.6 127 5-131 20-146 (147)
2 2bv1_A Regulator of G-protein 100.0 2.9E-35 1E-39 203.8 11.3 125 4-128 20-144 (145)
3 2oj4_A RGS3, regulator of G-pr 100.0 1.7E-35 5.8E-40 200.4 8.8 122 4-125 5-127 (127)
4 2dlv_A RGS18, regulator of G-p 100.0 4.5E-35 1.6E-39 201.5 10.8 125 4-128 13-138 (140)
5 2a72_A Regulator of G-protein 100.0 5.2E-35 1.8E-39 202.7 11.1 127 4-130 11-137 (146)
6 1zv4_X RGS17, regulator of G-p 100.0 9.5E-35 3.3E-39 204.0 10.7 127 4-130 31-158 (158)
7 2jm5_A RGS18, regulator of G-p 100.0 8.4E-35 2.9E-39 202.7 10.2 128 4-131 9-137 (151)
8 3c7l_A Regulator of G-protein 100.0 7.4E-35 2.5E-39 200.0 9.7 121 4-124 16-137 (137)
9 2crp_A RGS5, regulator of G-pr 100.0 1.7E-34 5.8E-39 200.9 11.4 125 4-128 23-148 (150)
10 2af0_A Regulator of G-protein 100.0 1.3E-34 4.4E-39 200.6 9.8 124 4-127 21-145 (146)
11 2ihd_A RGS8, regulator of G-pr 100.0 2.1E-34 7.3E-39 201.6 8.9 121 5-125 34-155 (155)
12 2dlr_A RGS10, regulator of G-p 100.0 1.3E-34 4.4E-39 201.3 7.5 128 4-132 13-141 (149)
13 1cmz_A Protein (GAIP (G-alpha 100.0 2.2E-34 7.5E-39 200.7 8.0 129 4-132 18-147 (152)
14 1dk8_A Axin; alpha-helix, PI-h 100.0 2.5E-34 8.7E-39 199.2 6.0 128 4-131 10-145 (147)
15 1agr_E RGS4; GI-alpha-1, hydro 100.0 1.3E-33 4.4E-38 205.7 8.8 131 4-134 57-188 (205)
16 2ebz_A RGS12, regulator of G-p 100.0 4.5E-33 1.5E-37 194.7 9.6 122 4-126 13-137 (155)
17 2ihb_B Regulator of G-protein 100.0 1.1E-33 3.6E-38 197.6 6.1 123 4-127 29-152 (153)
18 2jnu_A RGS14, regulator of G-p 100.0 3.6E-33 1.2E-37 195.1 5.9 124 4-128 9-135 (154)
19 2pbi_A Regulator of G-protein 100.0 3.2E-31 1.1E-35 210.4 11.3 127 5-131 297-423 (424)
20 3v5w_A G-protein coupled recep 99.0 4.9E-10 1.7E-14 93.6 6.0 121 7-127 52-178 (689)
21 3cx8_B RHO guanine nucleotide 99.0 1.8E-08 6.1E-13 72.0 12.2 107 8-115 24-132 (203)
22 2acx_A G protein-coupled recep 98.9 1.2E-08 4.3E-13 83.8 10.4 118 8-125 51-172 (576)
23 4gou_A EHRGS-rhogef; RGS domai 98.6 1.4E-07 4.7E-12 70.9 8.2 112 4-116 11-130 (518)
24 1iap_A Guanine nucleotide exch 98.5 4.8E-07 1.6E-11 64.8 7.8 80 8-87 6-85 (211)
25 3ab3_B RHO guanine nucleotide 98.2 5E-07 1.7E-11 65.9 3.1 98 9-106 61-163 (246)
26 3c4z_A Rhodopsin kinase; Ser/T 97.8 0.00012 4E-09 59.7 10.1 113 10-125 58-173 (543)
27 2lh0_A Histone chaperone RTT10 30.6 59 0.002 18.9 3.2 28 74-101 11-40 (70)
28 1xc0_A Pardaxin P-4, PA4; BEND 23.4 10 0.00035 18.1 -0.8 21 110-130 5-25 (33)
No 1
>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B*
Probab=100.00 E-value=2.7e-35 Score=204.42 Aligned_cols=127 Identities=46% Similarity=0.774 Sum_probs=121.9
Q ss_pred chhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHHH
Q psy10901 5 QPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELTR 84 (137)
Q Consensus 5 ~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i~ 84 (137)
+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++....++...|..||++||.++||.+|||++.+|+.+.
T Consensus 20 ~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~~r~~i~ 99 (147)
T 1fqi_A 20 RWAFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYGDQSKVKEKAEEIYKLFLAPGARRWINIDGKTMDITV 99 (147)
T ss_dssp HTTTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHH
T ss_pred HHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCcccCCCHHHHHHHH
Confidence 69999999999999999999999999999999999999999999877899999999999999999999999999999999
Q ss_pred HhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCC
Q psy10901 85 KNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKS 131 (137)
Q Consensus 85 ~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~ 131 (137)
..+..|++++|+.||.+|+.+|+.|+||+|++|+.|.+++++...|.
T Consensus 100 ~~l~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~~p~ 146 (147)
T 1fqi_A 100 KGLKHPHRYVLDAAQTHIYMLMKKDSYARYLKSPIYKEMLAKAIEPQ 146 (147)
T ss_dssp HHTTSCCTTTTHHHHHHHHHHHHHHTHHHHHTSHHHHHHHHHSCCC-
T ss_pred HHhcCCCHHHHHHHHHHHHHHHhhCcHHHHhcCHHHHHHHHHhhCCC
Confidence 99988999999999999999999999999999999999999987764
No 2
>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C*
Probab=100.00 E-value=2.9e-35 Score=203.75 Aligned_cols=125 Identities=42% Similarity=0.679 Sum_probs=120.4
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELT 83 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i 83 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++....++...|..||++||.++||.+|||++.+|+.+
T Consensus 20 ~~~~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~~r~~i 99 (145)
T 2bv1_A 20 MQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACEDYKKTESDLLPCKAEEIYKAFVHSDAAKQINIDFRTREST 99 (145)
T ss_dssp HHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHH
T ss_pred HHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHCCCCCCcccCcCHHHHHHH
Confidence 37899999999999999999999999999999999999999999987779999999999999999999999999999999
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccC
Q psy10901 84 RKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSK 128 (137)
Q Consensus 84 ~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~ 128 (137)
...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++++.
T Consensus 100 ~~~l~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~ 144 (145)
T 2bv1_A 100 AKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQ 144 (145)
T ss_dssp HHHHTSCCTTTTHHHHHHHHHHHHHTHHHHHHTSHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHhhChhhhhccCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998764
No 3
>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=200.39 Aligned_cols=122 Identities=39% Similarity=0.677 Sum_probs=116.1
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|++..+ .++...|..||++||.++||.+||||+.+|+.
T Consensus 5 ~~w~~sl~~iL~~~~g~~~F~~Fl~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~a~~I~~~yi~~~s~~evni~~~~r~~ 84 (127)
T 2oj4_A 5 LKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH 84 (127)
T ss_dssp HHHTTCHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHH
T ss_pred HHHHhHHHHHHCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCCCcCccCCHHHHHH
Confidence 47999999999999999999999999999999999999999999853 56889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHh
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLN 125 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~ 125 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++
T Consensus 85 i~~~l~~~~~~~F~~aq~~v~~~m~~d~~~rFl~S~~y~~~l~ 127 (127)
T 2oj4_A 85 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN 127 (127)
T ss_dssp HHHTTSSCCTTTTHHHHHHHHHHHHHTHHHHHHHSHHHHTTTC
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHhhChhhhhccCHHHHHHhC
Confidence 9999999999999999999999999999999999999998763
No 4
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=100.00 E-value=4.5e-35 Score=201.48 Aligned_cols=125 Identities=39% Similarity=0.685 Sum_probs=119.6
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+ .++...|..||++||.++||.+||||+.+++.
T Consensus 13 ~~w~~sl~~iL~~~~~~~~F~~Fl~~e~s~enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~~r~~ 92 (140)
T 2dlv_A 13 VKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEV 92 (140)
T ss_dssp HHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSTTCCCCCHHHHHH
T ss_pred HHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCccccCCcHHHHHH
Confidence 36899999999999999999999999999999999999999999874 57889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccC
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSK 128 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~ 128 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+
T Consensus 93 i~~~l~~p~~~~F~~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~ 138 (140)
T 2dlv_A 93 ITNSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLDLMSGPS 138 (140)
T ss_dssp HHHGGGSCCTTTTHHHHHHHHHHHHHTHHHHHHTSHHHHHHHCCSS
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHhhCcchhhccCHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999998765
No 5
>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A
Probab=100.00 E-value=5.2e-35 Score=202.72 Aligned_cols=127 Identities=48% Similarity=0.879 Sum_probs=119.2
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELT 83 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i 83 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++....++...|..||++||.++||.+||||+.+++.+
T Consensus 11 ~~w~~sl~~iL~~p~g~~~F~~Fl~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~~i 90 (146)
T 2a72_A 11 KRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPIKEVPSRVQEIWQEFLAPGAPSAINLDSKSYDKT 90 (146)
T ss_dssp HHGGGCHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHH
T ss_pred HHHHhHHHHHhCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcCCCCcccCCCCHHHHHHH
Confidence 37999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCC
Q psy10901 84 RKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKK 130 (137)
Q Consensus 84 ~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~ 130 (137)
...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+..
T Consensus 91 ~~~l~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~~~ 137 (146)
T 2a72_A 91 THNVKEPGRYTFEDAQEHIYKLMKSDSYPRFIRSSAYQELLQAKKKS 137 (146)
T ss_dssp HHHHHSTTTTTTHHHHHHHHHHHHHTHHHHHHHSHHHHHHHHC----
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHhChhHhHhcCHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999987654
No 6
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.5e-35 Score=204.00 Aligned_cols=127 Identities=31% Similarity=0.625 Sum_probs=118.7
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+ .++...|..||++||.++||.+|||++.+|+.
T Consensus 31 ~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~~ 110 (158)
T 1zv4_X 31 LSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLDSRVREV 110 (158)
T ss_dssp HHHTTCHHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCC-CCCCCCCHHHHHH
T ss_pred HHHHhhHHHHhCCHHHHHHHHHHHHHccCHhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCCCCceeecCHHHHHH
Confidence 37999999999999999999999999999999999999999999865 56889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCC
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKK 130 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~ 130 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+.+
T Consensus 111 i~~~l~~p~~~~Fd~aq~~V~~lm~~d~fprFl~S~~y~~~l~~~~~~ 158 (158)
T 1zv4_X 111 INRNLLDPNPHMYEDAQLQIYTLMHRDSFPRFLNSQIYKSFVESTAGS 158 (158)
T ss_dssp HHHTTSSCCTTTTHHHHHHHHHHHHHTTHHHHTTSHHHHHHHHHHC--
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHChHHhHhcCHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999987653
No 7
>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A
Probab=100.00 E-value=8.4e-35 Score=202.73 Aligned_cols=128 Identities=38% Similarity=0.678 Sum_probs=120.4
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+ .++...|..||++||.++||.+||||+.+++.
T Consensus 9 ~~w~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~~ 88 (151)
T 2jm5_A 9 VKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEV 88 (151)
T ss_dssp HHHTTCHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTTCSSSSSCCCCCHHHHHH
T ss_pred HHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHccCcchhhcCCCHHHHHH
Confidence 47999999999999999999999999999999999999999999874 57889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCC
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKS 131 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~ 131 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+...
T Consensus 89 i~~~l~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~~~~ 137 (151)
T 2jm5_A 89 ITNSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLDLMEGRPQRP 137 (151)
T ss_dssp HHHHTTSCCTTTTHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTSCC---
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHhhChhHhHhcCHHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999999999999987644
No 8
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*
Probab=100.00 E-value=7.4e-35 Score=200.03 Aligned_cols=121 Identities=37% Similarity=0.618 Sum_probs=115.8
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+ .++...|..||++||.++||.+||||+.+|+.
T Consensus 16 ~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~~ 95 (137)
T 3c7l_A 16 LGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNIDHETREL 95 (137)
T ss_dssp HHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHH
T ss_pred HHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCCccCCCCHHHHHH
Confidence 47999999999999999999999999999999999999999999975 67889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHH
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFL 124 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l 124 (137)
+...+..|++++|++||.+|+.+|+.|+||||++|+.|.+++
T Consensus 96 i~~~l~~~~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l 137 (137)
T 3c7l_A 96 TKTNLQAATTSCFDVAQGKTRTLMEKDSYPRFLKSPAYRDLA 137 (137)
T ss_dssp HHHHHHTTCTTTTHHHHHHHHHHHHTTHHHHHHTSHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHChhHhhCcCHHHHHhC
Confidence 999999999999999999999999999999999999998764
No 9
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=200.94 Aligned_cols=125 Identities=36% Similarity=0.639 Sum_probs=119.7
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+ .++...|..||++||.++||.+||||+.+|+.
T Consensus 23 ~~w~~sl~~iL~~~~g~~~F~~Fl~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~~ 102 (150)
T 2crp_A 23 LQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDI 102 (150)
T ss_dssp THHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCCTTHHHHHHHHHHHHTSSTTCSSCCSCCHHHHHH
T ss_pred HHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHccCCCCccCCCCHHHHHH
Confidence 46899999999999999999999999999999999999999999874 67899999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccC
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSK 128 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~ 128 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+
T Consensus 103 i~~~l~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~ 148 (150)
T 2crp_A 103 TMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELISGPS 148 (150)
T ss_dssp HHHTTSSCSSGGGHHHHHHHHHHHHHTHHHHHHHSHHHHHHHSSSS
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999998764
No 10
>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B*
Probab=100.00 E-value=1.3e-34 Score=200.64 Aligned_cols=124 Identities=34% Similarity=0.596 Sum_probs=118.4
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCC-CcchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLP-LADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~-~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++.. ..++...|..||++||.++||.+||||+.+|+.
T Consensus 21 ~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~~ 100 (146)
T 2af0_A 21 QLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 100 (146)
T ss_dssp HHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHH
T ss_pred HHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCCcccCcCHHHHHH
Confidence 3689999999999999999999999999999999999999999987 357889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhcc
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGS 127 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~ 127 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.+++++.
T Consensus 101 i~~~l~~~~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~ 145 (146)
T 2af0_A 101 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKP 145 (146)
T ss_dssp HHHHGGGCCTTTTHHHHHHHHHHHHHTHHHHHHHSHHHHHHHCCC
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHhhChHHhHccCHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999864
No 11
>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A
Probab=100.00 E-value=2.1e-34 Score=201.62 Aligned_cols=121 Identities=43% Similarity=0.669 Sum_probs=115.4
Q ss_pred chhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCC-CcchHHHHHHHHHhccCCCCCCCCCCChHHHHHH
Q psy10901 5 QPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLP-LADVPAKAEEIWSEFLAVDASCPINVDSRSHELT 83 (137)
Q Consensus 5 ~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~-~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i 83 (137)
+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++.. ..++...|..||++||.++||.+||||+.+|+.|
T Consensus 34 ~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNI~~~~r~~i 113 (155)
T 2ihd_A 34 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREAT 113 (155)
T ss_dssp HTTSCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHH
T ss_pred HHHHhHHHHHCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCccccCCCHHHHHHH
Confidence 589999999999999999999999999999999999999999987 4578899999999999999999999999999999
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHh
Q psy10901 84 RKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLN 125 (137)
Q Consensus 84 ~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~ 125 (137)
...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++
T Consensus 114 ~~~l~~p~~~~Fd~aq~~V~~~m~~d~f~rFl~S~~y~~~l~ 155 (155)
T 2ihd_A 114 RKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLS 155 (155)
T ss_dssp HHHTTSCCTTTTHHHHHHHHHHHHHTHHHHHHTSHHHHTTC-
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHhhChhHhhccCHHHHHHHC
Confidence 999999999999999999999999999999999999998763
No 12
>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=201.31 Aligned_cols=128 Identities=36% Similarity=0.610 Sum_probs=120.3
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCc-chHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLA-DVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~-~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+. ++...|..||++||.++||.+|||++.+|.
T Consensus 13 ~~w~~sl~~iL~~~~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~- 91 (149)
T 2dlr_A 13 AKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRL- 91 (149)
T ss_dssp HHHHHCHHHHHHSHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTTSSTTCSSCCCCSCGGGC-
T ss_pred HHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCCccccCCHHHHH-
Confidence 479999999999999999999999999999999999999999998754 788999999999999999999999999998
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCCc
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKSS 132 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~~ 132 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+.+++
T Consensus 92 ~~~~~~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~~~~~ 141 (149)
T 2dlr_A 92 NEKILEEPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEED 141 (149)
T ss_dssp CHHHHHSCCTTHHHHHHHHHHHHHHHTTHHHHHHSHHHHHHHHHHSCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHChHHHHhcCHHHHHHHHhhccccc
Confidence 87778889999999999999999999999999999999999999877654
No 13
>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1
Probab=100.00 E-value=2.2e-34 Score=200.70 Aligned_cols=129 Identities=36% Similarity=0.591 Sum_probs=116.1
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCC-CcchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLP-LADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~-~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++.. ..++...|..||++||.++||.+|||++.+|+.
T Consensus 18 ~~~~~sl~~iL~~p~~~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~~r~~ 97 (152)
T 1cmz_A 18 QSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG 97 (152)
T ss_dssp HHHTTCSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHTTTCSSSCCCSCCSHHHHH
T ss_pred HHHHhhHHHHHCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCceeeCCHHHHHH
Confidence 3689999999999999999999999999999999999999999986 456889999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCCc
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKSS 132 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~~ 132 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..+.++.
T Consensus 98 i~~~l~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~~~~~ 147 (152)
T 1cmz_A 98 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLPWVDSSSS 147 (152)
T ss_dssp HHHHSSSCCTTSTHHHHHHHHHHHHHHTHHHHTTCHHHHTTC--------
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHChHHhHhcCHHHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999999999999998876553
No 14
>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A
Probab=100.00 E-value=2.5e-34 Score=199.20 Aligned_cols=128 Identities=23% Similarity=0.358 Sum_probs=119.4
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCC----C-cchHHHHHHHHHhcc-CCCCCCCCCCCh
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLP----L-ADVPAKAEEIWSEFL-AVDASCPINVDS 77 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~----~-~~~~~~a~~I~~~yi-~~~s~~eini~~ 77 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++.. + .++...|..||++|| .++||.+|||++
T Consensus 10 ~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~~~~~a~~Iy~~yi~~~~s~~~vni~~ 89 (147)
T 1dk8_A 10 LKWAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIVSRQTKP 89 (147)
T ss_dssp HHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTSHHHHHSCH
T ss_pred HHHHhCHHHHHCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHhCCccCCCCCCCCH
Confidence 4799999999999999999999999999999999999999999983 2 368899999999999 999999999999
Q ss_pred HHHHHHHHhhc--CCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCC
Q psy10901 78 RSHELTRKNIE--NPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKS 131 (137)
Q Consensus 78 ~~r~~i~~~~~--~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~ 131 (137)
.+++.|...+. .|++++|++||.+|+.+|+.|+||+|++|+.|.+++++.+.++
T Consensus 90 ~~r~~i~~~l~~~~~~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~~~~~ 145 (147)
T 1dk8_A 90 ATKSFIKGCIMKQLIDPAMFDQAQTEIQATMEENTYPSFLKSDIYLEYTRTGSESP 145 (147)
T ss_dssp HHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHTHHHHHTTSHHHHTTTTSCCCCC
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHhcccCC
Confidence 99999998885 4788999999999999999999999999999999999988765
No 15
>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A
Probab=100.00 E-value=1.3e-33 Score=205.69 Aligned_cols=131 Identities=34% Similarity=0.577 Sum_probs=116.7
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCC-CcchHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLP-LADVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~-~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++.. ..++...|..||++||.++||.+|||++.+|+.
T Consensus 57 ~~w~~sle~IL~dp~g~~~F~~FL~~e~s~EnL~Fw~ave~yk~~~~~~~~~~~A~~Iy~~YI~~~Sp~evNI~~~~r~~ 136 (205)
T 1agr_E 57 KKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 136 (205)
T ss_dssp HHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTTTHHHHHHHHHHHHTSTTCTTCCCCCHHHHHH
T ss_pred HHHHhhHHHHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCchhhhccHHHHHH
Confidence 3689999999999999999999999999999999999999999987 467899999999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCCccc
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKSSMK 134 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~~~~ 134 (137)
|...+..|++++|++||.+|+.+|+.|+||+|++|+.|.+++++.+.....+
T Consensus 137 i~~~l~~p~~~lFd~aq~~V~~lM~~d~fprFl~S~~Y~~~l~~~~~~~~~~ 188 (205)
T 1agr_E 137 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLTNPSSCGAEKQ 188 (205)
T ss_dssp HHHHTTSCCTTTTHHHHHHHHHHHHHTHHHHHTTSHHHHTCC----------
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHhcCHHHHHHHHhhcccCCCC
Confidence 9999999999999999999999999999999999999999999887766443
No 16
>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=194.73 Aligned_cols=122 Identities=37% Similarity=0.689 Sum_probs=113.1
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC---cchHHHHHHHHHhccCCCCCCCCCCChHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL---ADVPAKAEEIWSEFLAVDASCPINVDSRSH 80 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~---~~~~~~a~~I~~~yi~~~s~~eini~~~~r 80 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++... .++...|..||++||.++||.+|||++.+|
T Consensus 13 ~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~~r 92 (155)
T 2ebz_A 13 ASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQ 92 (155)
T ss_dssp THHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHSSSSCSSCCSSCGGGC
T ss_pred HHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCCccCCCHHHH
Confidence 57999999999999999999999999999999999999999999864 357889999999999999999999999987
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhc
Q psy10901 81 ELTRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNG 126 (137)
Q Consensus 81 ~~i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~ 126 (137)
.+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++.
T Consensus 93 -~~~~~~~~p~~~~Fd~aq~~V~~lm~~d~~~rFl~S~~y~~~l~~ 137 (155)
T 2ebz_A 93 -LADDVLRAPHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILA 137 (155)
T ss_dssp -HHHHHHHSCCTTHHHHHHHHHHHHHHHTHHHHHHHSHHHHHHHHH
T ss_pred -HHHHHhcCCCHHHHHHHHHHHHHHHHHChhHHHhhCHHHHHHHHH
Confidence 555566779999999999999999999999999999999999875
No 17
>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A
Probab=100.00 E-value=1.1e-33 Score=197.56 Aligned_cols=123 Identities=37% Similarity=0.623 Sum_probs=102.1
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCc-chHHHHHHHHHhccCCCCCCCCCCChHHHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLA-DVPAKAEEIWSEFLAVDASCPINVDSRSHEL 82 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~-~~~~~a~~I~~~yi~~~s~~eini~~~~r~~ 82 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++..+. ++...|..||++||.++||.+|||+..++.
T Consensus 29 ~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~~r~- 107 (153)
T 2ihb_B 29 AKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRL- 107 (153)
T ss_dssp HHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCC-----
T ss_pred HHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCHHHHH-
Confidence 368999999999999999999999999999999999999999998764 788999999999999999999999999998
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhcc
Q psy10901 83 TRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGS 127 (137)
Q Consensus 83 i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~ 127 (137)
+...+..|++++|++||.+|+.+|+.|+||+|++|+.|.++++..
T Consensus 108 ~~~~~~~p~~~~Fd~aq~~V~~~m~~d~~~rFl~S~~y~~~l~~~ 152 (153)
T 2ihb_B 108 NEKILEEPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTE 152 (153)
T ss_dssp -------CCTTTTHHHHHHHHHHHHHTHHHHHTTSTTTC------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHChHHhhccCHHHHHHHhcc
Confidence 777777799999999999999999999999999999999999864
No 18
>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.98 E-value=3.6e-33 Score=195.06 Aligned_cols=124 Identities=37% Similarity=0.683 Sum_probs=113.6
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCC---cchHHHHHHHHHhccCCCCCCCCCCChHHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPL---ADVPAKAEEIWSEFLAVDASCPINVDSRSH 80 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~---~~~~~~a~~I~~~yi~~~s~~eini~~~~r 80 (137)
.+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++... .++...|..||++||.++||.+|||++.+|
T Consensus 9 ~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~~r 88 (154)
T 2jnu_A 9 ASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPVNIDRQAW 88 (154)
T ss_dssp GGGGTCHHHHHHSHHHHHHHHHHTTTSSCTHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHTSTTCSSCCCSCCTTC
T ss_pred HHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCcccCCcHHHH
Confidence 58999999999999999999999999999999999999999999864 357889999999999999999999999987
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccC
Q psy10901 81 ELTRKNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSK 128 (137)
Q Consensus 81 ~~i~~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~ 128 (137)
.....+..|++++|++||.+|+.+|+.|+||+|++|+.|.+++....
T Consensus 89 -~~~~~~~~p~~~~Fd~aq~~V~~lm~~d~~~rFl~S~~y~~~l~~~~ 135 (154)
T 2jnu_A 89 -LGEEVLAEPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYRECLLAEA 135 (154)
T ss_dssp -CCHHHHHSCCTTTTHHHHHHHHHHHHTTHHHHHTTSTTHHHHHCSSC
T ss_pred -HHHHHhcCCCHHHHHHHHHHHHHHHHhChhHhhccCHHHHHHHHHHh
Confidence 23345567899999999999999999999999999999999998744
No 19
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=3.2e-31 Score=210.35 Aligned_cols=127 Identities=46% Similarity=0.767 Sum_probs=122.5
Q ss_pred chhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHHH
Q psy10901 5 QPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELTR 84 (137)
Q Consensus 5 ~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i~ 84 (137)
+|..+|++||.||.|+.+|++||++++|.|||.||++|++|++....++...|..||++||+++||.+|||++.+++.+.
T Consensus 297 ~w~~sle~LL~dp~g~~~F~~FL~~e~s~EnL~Fwlave~fk~~~~~~~~~~A~~Iy~~YI~~~Sp~eVNId~~~r~~i~ 376 (424)
T 2pbi_A 297 RWAFNFSELIRDPKGRQSFQYFLKKEFSGENLGFWEACEDLKYGDQSKVKEKAEEIYKLFLAPGARRWINIDGKTMDITV 376 (424)
T ss_dssp HTTTCHHHHHHSHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHH
T ss_pred hhhcCHHHHHCCHHHHHHHHHHHHHhCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCccccCCCHHHHHHHH
Confidence 68899999999999999999999999999999999999999998777899999999999999999999999999999999
Q ss_pred HhhcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhccCCCC
Q psy10901 85 KNIENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGSKKKS 131 (137)
Q Consensus 85 ~~~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~~~~~ 131 (137)
..+..|++++|+.||.+|+.+|+.|+||+|++|+.|.+++++...|.
T Consensus 377 ~~l~~P~~~lFd~AQ~~V~~lM~~DsyprFl~S~~Y~~~Lq~~~~p~ 423 (424)
T 2pbi_A 377 KGLRHPHRYVLDAAQTHIYMLMKKDSYARYLKSPIYKEMLAKAIEPQ 423 (424)
T ss_dssp HHTTSCCTTTTHHHHHHHHHHHHHTHHHHHHTSHHHHHHHHHCBCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHhhCchHhHhcCHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999999988764
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=98.98 E-value=4.9e-10 Score=93.64 Aligned_cols=121 Identities=14% Similarity=0.283 Sum_probs=101.1
Q ss_pred hhhHHHHhcChhhHHHHHHHHHhh--cchhhHHHHHHHHhhcCCCC-cchHHHHHHHHHhccCCCCCCCC-CCChHHHHH
Q psy10901 7 ASSFRELLKDPLGRDHFTKFLDKE--FSGENLKFWEAVQELKCLPL-ADVPAKAEEIWSEFLAVDASCPI-NVDSRSHEL 82 (137)
Q Consensus 7 ~~sl~~iL~~p~~~~~F~~Fl~~~--~~~e~l~F~~~ve~fk~~~~-~~~~~~a~~I~~~yi~~~s~~ei-ni~~~~r~~ 82 (137)
...++.|...|+|+.+|++||.+. .....+.||.+|++|....+ .++...+..|+++|+.+.+...+ .++......
T Consensus 52 ~~~~~~i~~q~ig~~~f~~f~~~~~~~~~~~~~~~~~v~~~~~~~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 131 (689)
T 3v5w_A 52 EVTFEKIFSQKLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFDSYIMKELLACSHPFSKSATEH 131 (689)
T ss_dssp CCSHHHHHTSHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTSHHHHHHHSSSSCCCHHHHHH
T ss_pred ccccceecCccHHHHHHHHHhcCcchhhhHHHHHHHHHHhhhccCchhhHHHHHHHHHHHhcchhhhhccCccchHHHHH
Confidence 345788889999999999998765 44468999999999998764 56889999999999987654333 678888888
Q ss_pred HHHhhc--CCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHhcc
Q psy10901 83 TRKNIE--NPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLNGS 127 (137)
Q Consensus 83 i~~~~~--~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~~~ 127 (137)
+..... .+.+++|..+.+.|...|..+.|+.|+.|+.|.++++..
T Consensus 132 ~~~~~~~~~~~~~lf~~~~~~~~~~l~~~~f~~~~~s~~~~r~~q~k 178 (689)
T 3v5w_A 132 VQGHLGKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWK 178 (689)
T ss_dssp HHHHHHTTCCCTTTTHHHHHHHHHHHTTHHHHHHHHSHHHHHHHHHH
T ss_pred HHHhhhhccCChHHHHHHHHHHHHHhccCcccccccChhHHHHHhcc
Confidence 877664 467799999999999999999999999999999988754
No 21
>3cx8_B RHO guanine nucleotide exchange factor 11; signal transduction, protein complex, GTP-binding, lipoprotein, membrane, nucleotide-binding; HET: GSP; 2.00A {Rattus norvegicus} PDB: 3cx6_B* 3cx7_B* 1htj_F
Probab=98.95 E-value=1.8e-08 Score=72.01 Aligned_cols=107 Identities=14% Similarity=0.196 Sum_probs=91.8
Q ss_pred hhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHHHHhh
Q psy10901 8 SSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELTRKNI 87 (137)
Q Consensus 8 ~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i~~~~ 87 (137)
-+++.+...|..+..|..|+..+.....|.||+-++-|+....++....|..|+..||.++||..|++|..+...|...+
T Consensus 24 ~sle~Lk~rPAHLavFL~yvlsq~dP~~LlfyL~~d~yk~~~~Ke~rk~a~ei~stFL~~~ApL~v~vp~~~~~eid~~L 103 (203)
T 3cx8_B 24 QDLEKLKSHPAYLVVFLRYILSQADPGPLLFYLCSEVYQQTNPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDLRL 103 (203)
T ss_dssp HCHHHHHTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHTSCTTTCHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHHHHH
T ss_pred cCHHHHhcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHhccChHHHHHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHh
Confidence 36788899999999999999999999999999999999999888999999999999999999999999999988887766
Q ss_pred c--CCCHHHHHHHHHHHHHHhhcCcccchh
Q psy10901 88 E--NPTRWSFDTAAAHVYHLMKSDSYSRYL 115 (137)
Q Consensus 88 ~--~~~~~~F~~a~~~V~~~l~~d~fp~F~ 115 (137)
. +..+..|.++++.+...+. .....|.
T Consensus 104 ~~ee~~R~~f~~~q~~~~~~I~-~qL~dFr 132 (203)
T 3cx8_B 104 RNNEDPRNVLCEAQEAVMLEIQ-EQINDYR 132 (203)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 4 3467899998887776554 2344443
No 22
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=98.87 E-value=1.2e-08 Score=83.78 Aligned_cols=118 Identities=19% Similarity=0.315 Sum_probs=99.7
Q ss_pred hhHHHHh-cChhhHHHHHHHHHhh-cchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCC-CCChHHHHHHH
Q psy10901 8 SSFRELL-KDPLGRDHFTKFLDKE-FSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPI-NVDSRSHELTR 84 (137)
Q Consensus 8 ~sl~~iL-~~p~~~~~F~~Fl~~~-~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~ei-ni~~~~r~~i~ 84 (137)
.+++.|. .+|+|+.+|++||.+. .....+.||.+|++|+.....++...|..|+++|+.+.++..+ .+|..+.+.+.
T Consensus 51 ~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 130 (576)
T 2acx_A 51 RDYHSLCERNPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCT 130 (576)
T ss_dssp CCHHHHHTTSHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHSCSSSCCSSTTCCHHHHHHHH
T ss_pred cCHHHhhccCchhHHHHHHHHhcCcchhHHHHHHHHHHhhhcccchhHHHHHHHHHHHhcCcccccccccCCHHHHHHHH
Confidence 3577886 6899999999999977 5668899999999999988888999999999999999998776 79999988866
Q ss_pred Hhhc-CCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHh
Q psy10901 85 KNIE-NPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLN 125 (137)
Q Consensus 85 ~~~~-~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~ 125 (137)
+.+. .|..++|.++...+...+....+..|..|..+.++++
T Consensus 131 ~~l~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~s~~~~~~~~ 172 (576)
T 2acx_A 131 QRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQ 172 (576)
T ss_dssp HHHHHCCCTTTTHHHHHHHHHHHTTHHHHHHHTSHHHHHHHH
T ss_pred HHHhcCchHHHHHHHHHHHHHhhccCcchhhcchhhhhhhhh
Confidence 6665 4778899999988888887667888888887776653
No 23
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=98.62 E-value=1.4e-07 Score=70.94 Aligned_cols=112 Identities=20% Similarity=0.271 Sum_probs=94.4
Q ss_pred cchhhhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHH----hhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHH
Q psy10901 4 LQPASSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQ----ELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRS 79 (137)
Q Consensus 4 ~~~~~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve----~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~ 79 (137)
..|. .+.++|.|....++.+-||..+.++||+.|++.|- +|.++.+.-+.+...-|-+.|+..+|..++|++..+
T Consensus 11 egwp-tlqevledsfmkrllrcylsderseenldflesvglyesqfdkltpkvrlealnfikdqfldrnserqvnlsyqi 89 (518)
T 4gou_A 11 EGWP-TLQEVLEDSFMKRLLRCYLSDERSEENLDFLESVGLYESQFDKLTPKVRLEALNFIKDQFLDRNSERQVNLSYQI 89 (518)
T ss_dssp TTSC-CHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHH
T ss_pred cCCh-hHHHHHHHHHHHHHHHHHcccccchhhhhHHHhccchHhhhhhcCchhhHHHHHhHHHHhhcccchhhcchhHHH
Confidence 3454 79999999999999999999999999999999994 566666656667777899999999999999999999
Q ss_pred HHHHHHhhcC----CCHHHHHHHHHHHHHHhhcCcccchhc
Q psy10901 80 HELTRKNIEN----PTRWSFDTAAAHVYHLMKSDSYSRYLR 116 (137)
Q Consensus 80 r~~i~~~~~~----~~~~~F~~a~~~V~~~l~~d~fp~F~~ 116 (137)
.+.|...+.+ .+.++|.+|.+..-.+|-+..|.-|++
T Consensus 90 qqsilkklsevtsnapkdvfneakkateyllyteqytyfin 130 (518)
T 4gou_A 90 QQSILKKLSEVTSNAPKDVFNEAKKATEYLLYTEQYTYFIN 130 (518)
T ss_dssp HHHHHHHHHTCCSSCCTTTTHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHhhhHHhhhHHHHHHHHH
Confidence 9988877764 356899999999888887666766654
No 24
>1iap_A Guanine nucleotide exchange factor P115rhogef; RGS, RGRGS, signaling protein; 1.90A {Homo sapiens} SCOP: a.91.1.1
Probab=98.49 E-value=4.8e-07 Score=64.82 Aligned_cols=80 Identities=13% Similarity=0.092 Sum_probs=74.5
Q ss_pred hhHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHHHHhh
Q psy10901 8 SSFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELTRKNI 87 (137)
Q Consensus 8 ~sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i~~~~ 87 (137)
-+++.+...|..+..|..|+..+....+|.||+-.+-|+...+.+.+..|..|+..||.++||..+++|..+...|....
T Consensus 6 qsl~~Lk~rPAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~~~Ke~rk~~~Ei~stFL~~~ApL~v~v~e~i~~eiD~~r 85 (211)
T 1iap_A 6 QSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTR 85 (211)
T ss_dssp SCHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHTTCC
T ss_pred cCHHHHhhccHHHHHHHHHHHHcCCchhhHHHHHHHHHhccChHHHHHHHHHHHHHHhCCCCCccccCCHHHHHHHHHHH
Confidence 36888899999999999999999999999999999999999988999999999999999999999999999988886653
No 25
>3ab3_B RHO guanine nucleotide exchange factor 1; signal transduction, protein complex, GTP-binding, membrane, transducer, lipoprotein, nucleotide-binding; HET: GDP; 2.40A {Homo sapiens} PDB: 1shz_C*
Probab=98.25 E-value=5e-07 Score=65.93 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=71.1
Q ss_pred hHHHHhcChhhHHHHHHHHHhhcchhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCCCCChHHHHHHHHhhc
Q psy10901 9 SFRELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPINVDSRSHELTRKNIE 88 (137)
Q Consensus 9 sl~~iL~~p~~~~~F~~Fl~~~~~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~eini~~~~r~~i~~~~~ 88 (137)
++..+...|..+..|..|+..+..-..|.||+-.+-|+....++.++.|..|+..||.++||..+++|..+...|...+.
T Consensus 61 sle~Lk~rPAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~~~Ke~Rk~a~Ei~stFL~~~ApL~v~v~e~ia~eID~~r~ 140 (246)
T 3ab3_B 61 SLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRA 140 (246)
T ss_dssp SGGGTTTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHC-------CCTTHHHHHHTTSTTCTTCCCCCTTGGGC------
T ss_pred CHHHHhccchHHHHHHHHHHhcCCchhhHHHHHHHHHhccChHHHHHHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHH
Confidence 46667789999999999999999999999999999999998888999999999999999999999999998766655543
Q ss_pred C-----CCHHHHHHHHHHHHHHh
Q psy10901 89 N-----PTRWSFDTAAAHVYHLM 106 (137)
Q Consensus 89 ~-----~~~~~F~~a~~~V~~~l 106 (137)
+ .....|.++++.+...+
T Consensus 141 ~~~~ee~~R~~~~~~r~~~~~eI 163 (246)
T 3ab3_B 141 DLISEDVQRRFVQEVVQSQQVAV 163 (246)
T ss_dssp ------CHHHHHHHHHHTTHHHH
T ss_pred hhChHHHHHHHHHHHHHHHHHHH
Confidence 2 23456666665444333
No 26
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=97.84 E-value=0.00012 Score=59.74 Aligned_cols=113 Identities=21% Similarity=0.384 Sum_probs=87.8
Q ss_pred HHHH-hcChhhHHHHHHHHHhhc-chhhHHHHHHHHhhcCCCCcchHHHHHHHHHhccCCCCCCCC-CCChHHHHHHHHh
Q psy10901 10 FREL-LKDPLGRDHFTKFLDKEF-SGENLKFWEAVQELKCLPLADVPAKAEEIWSEFLAVDASCPI-NVDSRSHELTRKN 86 (137)
Q Consensus 10 l~~i-L~~p~~~~~F~~Fl~~~~-~~e~l~F~~~ve~fk~~~~~~~~~~a~~I~~~yi~~~s~~ei-ni~~~~r~~i~~~ 86 (137)
+..+ +..|+|..+|++||.+.. ......||..+++|......++...|..|++.|+.+++...+ .++......+...
T Consensus 58 ~~~~~~~~~ig~~~~~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~ 137 (543)
T 3c4z_A 58 FEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAG 137 (543)
T ss_dssp HHHHHTSSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC
T ss_pred HHHhhccCcccHHHHHHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcC
Confidence 4445 568999999999999774 347778999999999887778999999999999999986655 4555555554332
Q ss_pred hcCCCHHHHHHHHHHHHHHhhcCcccchhccHHHHHHHh
Q psy10901 87 IENPTRWSFDTAAAHVYHLMKSDSYSRYLRSDIYRDFLN 125 (137)
Q Consensus 87 ~~~~~~~~F~~a~~~V~~~l~~d~fp~F~~S~~y~~~l~ 125 (137)
....+|.+....+...+....++.|+.|..+.++++
T Consensus 138 ---~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 173 (543)
T 3c4z_A 138 ---AGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQ 173 (543)
T ss_dssp ------CTTHHHHHHHHHHHTTHHHHHHHTSHHHHHHHH
T ss_pred ---CCchhhHHHHHHHHHhhhcCchHhhhhhhhhhhhhh
Confidence 334577888888888888788999999998888764
No 27
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=30.58 E-value=59 Score=18.91 Aligned_cols=28 Identities=7% Similarity=0.003 Sum_probs=21.4
Q ss_pred CCChHHHHHHHHhhcC-C-CHHHHHHHHHH
Q psy10901 74 NVDSRSHELTRKNIEN-P-TRWSFDTAAAH 101 (137)
Q Consensus 74 ni~~~~r~~i~~~~~~-~-~~~~F~~a~~~ 101 (137)
+||+.++++|.+.+.. | ...+|.++.+.
T Consensus 11 ~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 11 ELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp GSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 8999999999998874 3 44677666555
No 28
>1xc0_A Pardaxin P-4, PA4; BEND-helix-BEND-helix motif, signaling protein; NMR {Synthetic} SCOP: j.6.1.1 PDB: 2kns_A
Probab=23.43 E-value=10 Score=18.13 Aligned_cols=21 Identities=10% Similarity=0.308 Sum_probs=15.7
Q ss_pred cccchhccHHHHHHHhccCCC
Q psy10901 110 SYSRYLRSDIYRDFLNGSKKK 130 (137)
Q Consensus 110 ~fp~F~~S~~y~~~l~~~~~~ 130 (137)
..|.-+.||.|+.++..+++-
T Consensus 5 lipkiissplfktllsavgsa 25 (33)
T 1xc0_A 5 LIPKIISSPLFKTLLSAVGSA 25 (33)
T ss_dssp SHHHHTTTTTHHHHHHHHHHH
T ss_pred hhhHHHccHHHHHHHHHHHHH
Confidence 357778889999888876643
Done!