Query psy10905
Match_columns 219
No_of_seqs 29 out of 31
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 21:33:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10905.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10905hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gre_A Serine/threonine-protei 97.8 0.0022 7.6E-08 54.4 18.7 152 16-175 216-379 (437)
2 3mmy_A MRNA export factor; mRN 97.8 0.004 1.4E-07 50.1 18.6 172 15-194 87-346 (368)
3 1gxr_A ESG1, transducin-like e 97.7 0.0031 1.1E-07 50.2 16.8 143 8-175 45-192 (337)
4 3odt_A Protein DOA1; ubiquitin 97.7 0.0095 3.3E-07 47.0 19.1 135 15-181 143-282 (313)
5 1p22_A F-BOX/WD-repeat protein 97.7 0.0047 1.6E-07 53.1 18.7 136 16-183 215-353 (435)
6 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.0069 2.4E-07 51.9 19.4 127 16-174 161-287 (445)
7 1p22_A F-BOX/WD-repeat protein 97.6 0.012 4.2E-07 50.5 20.4 139 15-183 174-313 (435)
8 1gxr_A ESG1, transducin-like e 97.6 0.011 3.7E-07 47.1 18.4 134 12-174 95-232 (337)
9 4gqb_B Methylosome protein 50; 97.6 0.007 2.4E-07 51.9 18.0 145 12-183 125-277 (344)
10 3v7d_B Cell division control p 97.6 0.0085 2.9E-07 51.2 18.3 153 14-176 162-320 (464)
11 4g56_B MGC81050 protein; prote 97.5 0.0039 1.3E-07 53.1 15.6 146 12-184 137-290 (357)
12 1yfq_A Cell cycle arrest prote 97.5 0.014 4.9E-07 47.0 18.1 159 13-191 149-321 (342)
13 3k26_A Polycomb protein EED; W 97.5 0.0028 9.7E-08 51.1 13.9 152 14-173 115-292 (366)
14 1pgu_A Actin interacting prote 97.5 0.015 5.1E-07 50.7 19.3 133 16-174 208-347 (615)
15 2ovr_B FBW7, F-BOX/WD repeat p 97.5 0.012 3.9E-07 50.6 18.3 128 17-177 122-249 (445)
16 3zwl_B Eukaryotic translation 97.5 0.02 6.7E-07 46.0 18.3 137 17-183 178-334 (369)
17 1pgu_A Actin interacting prote 97.5 0.011 3.9E-07 51.4 18.1 143 13-183 445-602 (615)
18 1r5m_A SIR4-interacting protei 97.5 0.032 1.1E-06 45.7 20.5 152 16-183 110-266 (425)
19 3zwl_B Eukaryotic translation 97.5 0.028 9.7E-07 45.1 19.2 145 14-175 74-227 (369)
20 2aq5_A Coronin-1A; WD40 repeat 97.5 0.037 1.3E-06 46.8 20.5 142 16-183 83-238 (402)
21 2vdu_B TRNA (guanine-N(7)-)-me 97.4 0.022 7.6E-07 49.3 19.3 154 16-185 197-374 (450)
22 1got_B GT-beta; complex (GTP-b 97.4 0.028 9.5E-07 46.9 19.2 141 15-183 185-331 (340)
23 3f3f_A Nucleoporin SEH1; struc 97.4 0.019 6.3E-07 45.2 17.0 148 14-176 57-224 (351)
24 3jrp_A Fusion protein of prote 97.4 0.017 5.8E-07 46.7 16.9 136 15-176 12-157 (379)
25 1k8k_C P40, ARP2/3 complex 41 97.4 0.029 9.8E-07 45.6 18.3 158 14-183 96-262 (372)
26 1r5m_A SIR4-interacting protei 97.3 0.013 4.6E-07 48.0 16.0 130 15-175 248-403 (425)
27 4aez_A CDC20, WD repeat-contai 97.3 0.013 4.5E-07 49.8 16.1 122 25-175 104-226 (401)
28 3k26_A Polycomb protein EED; W 97.3 0.017 5.8E-07 46.5 16.0 147 13-183 17-180 (366)
29 1yfq_A Cell cycle arrest prote 97.3 0.014 4.9E-07 46.9 15.5 139 15-182 12-166 (342)
30 4a11_B DNA excision repair pro 97.3 0.0091 3.1E-07 48.9 14.2 140 14-176 43-196 (408)
31 1sq9_A Antiviral protein SKI8; 97.3 0.046 1.6E-06 45.1 18.4 149 15-183 122-310 (397)
32 3v7d_B Cell division control p 97.2 0.063 2.2E-06 45.8 19.6 144 14-182 203-368 (464)
33 3bws_A Protein LP49; two-domai 97.2 0.061 2.1E-06 45.1 18.9 127 15-173 254-407 (433)
34 3gre_A Serine/threonine-protei 97.2 0.029 9.9E-07 47.5 17.0 152 7-175 54-223 (437)
35 1k8k_C P40, ARP2/3 complex 41 97.2 0.021 7.3E-07 46.3 15.5 142 15-183 9-161 (372)
36 4gga_A P55CDC, cell division c 97.2 0.052 1.8E-06 46.5 18.3 139 17-183 233-383 (420)
37 3i2n_A WD repeat-containing pr 97.2 0.017 5.7E-07 46.5 14.3 125 25-174 181-329 (357)
38 3vl1_A 26S proteasome regulato 97.1 0.056 1.9E-06 45.0 17.9 154 12-176 137-300 (420)
39 3jrp_A Fusion protein of prote 97.1 0.046 1.6E-06 44.2 16.7 137 14-175 55-215 (379)
40 3f3f_A Nucleoporin SEH1; struc 97.1 0.037 1.3E-06 43.4 15.3 131 14-163 11-151 (351)
41 3ow8_A WD repeat-containing pr 97.1 0.065 2.2E-06 44.8 17.6 156 12-175 30-215 (321)
42 3ei3_B DNA damage-binding prot 97.0 0.064 2.2E-06 44.5 17.3 136 14-176 73-214 (383)
43 4ggc_A P55CDC, cell division c 97.0 0.059 2E-06 42.7 16.3 142 17-183 153-303 (318)
44 2pm9_A Protein WEB1, protein t 97.0 0.021 7.2E-07 47.3 14.1 148 15-183 166-325 (416)
45 1erj_A Transcriptional repress 97.0 0.079 2.7E-06 45.2 18.0 153 14-175 165-361 (393)
46 4ery_A WD repeat-containing pr 97.0 0.1 3.5E-06 42.1 17.8 134 12-175 21-158 (312)
47 2pbi_B Guanine nucleotide-bind 97.0 0.14 4.8E-06 43.2 19.2 131 16-174 198-334 (354)
48 3ow8_A WD repeat-containing pr 96.9 0.14 4.7E-06 42.8 18.4 138 17-184 167-310 (321)
49 3mkq_A Coatomer beta'-subunit; 96.9 0.049 1.7E-06 49.9 16.7 134 14-175 140-279 (814)
50 3iz6_a 40S ribosomal protein R 96.9 0.048 1.6E-06 46.3 15.5 145 17-183 208-363 (380)
51 3i2n_A WD repeat-containing pr 96.9 0.059 2E-06 43.3 15.2 141 10-175 61-218 (357)
52 3mkq_A Coatomer beta'-subunit; 96.8 0.14 4.7E-06 46.9 18.7 143 14-183 97-247 (814)
53 4e54_B DNA damage-binding prot 96.8 0.037 1.3E-06 47.8 14.2 133 16-175 121-259 (435)
54 1sq9_A Antiviral protein SKI8; 96.8 0.11 3.7E-06 42.8 16.4 148 17-176 189-364 (397)
55 2ynn_A Coatomer subunit beta'; 96.8 0.17 5.7E-06 41.5 17.5 134 15-175 141-279 (304)
56 3mmy_A MRNA export factor; mRN 96.8 0.15 5.2E-06 40.7 19.2 131 15-176 40-180 (368)
57 4aez_A CDC20, WD repeat-contai 96.7 0.22 7.4E-06 42.2 20.9 131 14-176 134-269 (401)
58 2pm9_A Protein WEB1, protein t 96.7 0.044 1.5E-06 45.3 13.8 153 13-184 66-235 (416)
59 3odt_A Protein DOA1; ubiquitin 96.7 0.15 5.2E-06 40.0 17.3 139 9-176 12-152 (313)
60 2pbi_B Guanine nucleotide-bind 96.7 0.2 6.9E-06 42.2 17.7 81 82-183 173-259 (354)
61 2ynn_A Coatomer subunit beta'; 96.7 0.21 7.1E-06 40.9 19.6 143 14-183 97-247 (304)
62 1vyh_C Platelet-activating fac 96.7 0.27 9.4E-06 42.3 19.5 155 16-184 194-358 (410)
63 1l0q_A Surface layer protein; 96.6 0.24 8.3E-06 40.9 20.8 125 16-172 117-249 (391)
64 3vl1_A 26S proteasome regulato 96.6 0.25 8.7E-06 41.1 20.0 144 14-183 181-353 (420)
65 4gga_A P55CDC, cell division c 96.6 0.026 8.8E-07 48.4 11.5 76 80-174 120-197 (420)
66 1got_B GT-beta; complex (GTP-b 96.5 0.28 9.4E-06 40.8 18.4 130 17-176 100-236 (340)
67 4aow_A Guanine nucleotide-bind 96.5 0.13 4.6E-06 41.0 14.7 117 14-153 215-335 (340)
68 3dwl_C Actin-related protein 2 96.5 0.061 2.1E-06 44.3 12.9 159 14-184 100-271 (377)
69 4a11_B DNA excision repair pro 96.5 0.18 6.1E-06 41.1 15.5 153 16-184 188-354 (408)
70 2vdu_B TRNA (guanine-N(7)-)-me 96.4 0.39 1.3E-05 41.4 18.5 123 14-163 149-279 (450)
71 3jro_A Fusion protein of prote 96.4 0.12 4.1E-06 48.9 16.1 137 14-175 53-213 (753)
72 3ei3_B DNA damage-binding prot 96.4 0.3 1E-05 40.5 16.7 142 12-183 116-270 (383)
73 4g56_B MGC81050 protein; prote 96.3 0.21 7.3E-06 42.3 15.9 141 16-184 183-332 (357)
74 3jro_A Fusion protein of prote 96.3 0.2 6.9E-06 47.3 17.1 136 15-176 10-155 (753)
75 2xyi_A Probable histone-bindin 96.3 0.13 4.3E-06 44.5 14.3 146 9-176 123-287 (430)
76 4ery_A WD repeat-containing pr 96.2 0.35 1.2E-05 38.9 18.8 135 16-175 151-288 (312)
77 3sfz_A APAF-1, apoptotic pepti 96.2 0.49 1.7E-05 46.0 19.5 153 15-176 700-892 (1249)
78 4aow_A Guanine nucleotide-bind 96.2 0.36 1.2E-05 38.5 19.4 132 25-184 141-275 (340)
79 4gqb_B Methylosome protein 50; 96.1 0.51 1.8E-05 40.2 17.3 141 15-183 170-319 (344)
80 1vyh_C Platelet-activating fac 96.1 0.58 2E-05 40.2 18.9 130 17-175 237-389 (410)
81 3sfz_A APAF-1, apoptotic pepti 96.0 0.59 2E-05 45.4 19.1 140 14-183 615-762 (1249)
82 2aq5_A Coronin-1A; WD40 repeat 96.0 0.15 5.3E-06 42.9 13.1 130 25-175 48-185 (402)
83 3lrv_A PRE-mRNA-splicing facto 96.0 0.29 1E-05 40.5 14.5 133 27-185 88-235 (343)
84 2xyi_A Probable histone-bindin 95.9 0.29 1E-05 42.1 15.1 141 15-183 232-398 (430)
85 1erj_A Transcriptional repress 95.9 0.68 2.3E-05 39.4 17.0 128 17-175 126-265 (393)
86 3q7m_A Lipoprotein YFGL, BAMB; 95.9 0.1 3.5E-06 43.8 11.5 113 24-169 239-351 (376)
87 3vgz_A Uncharacterized protein 95.8 0.56 1.9E-05 37.7 17.3 125 18-164 92-224 (353)
88 3dsm_A Uncharacterized protein 95.8 0.13 4.4E-06 43.3 11.8 114 23-162 6-121 (328)
89 3lrv_A PRE-mRNA-splicing facto 95.7 0.38 1.3E-05 39.7 14.3 136 16-176 172-321 (343)
90 4ggc_A P55CDC, cell division c 95.7 0.19 6.6E-06 39.7 11.9 78 80-176 40-119 (318)
91 3frx_A Guanine nucleotide-bind 95.7 0.73 2.5E-05 38.0 16.9 154 14-175 17-205 (319)
92 3bws_A Protein LP49; two-domai 95.6 0.34 1.2E-05 40.6 13.8 122 30-175 95-220 (433)
93 2hes_X YDR267CP; beta-propelle 95.6 0.8 2.7E-05 37.9 16.3 138 14-174 14-161 (330)
94 3dw8_B Serine/threonine-protei 95.6 0.38 1.3E-05 40.2 13.8 146 16-184 95-305 (447)
95 1nr0_A Actin interacting prote 95.5 1.1 3.8E-05 40.8 17.7 133 16-174 192-332 (611)
96 3dw8_B Serine/threonine-protei 95.5 0.4 1.4E-05 40.1 13.7 161 14-176 28-236 (447)
97 3q7m_A Lipoprotein YFGL, BAMB; 95.5 0.3 1E-05 40.9 13.0 119 19-162 48-169 (376)
98 2oaj_A Protein SNI1; WD40 repe 95.5 0.52 1.8E-05 46.2 16.4 134 9-175 12-160 (902)
99 3dwl_C Actin-related protein 2 95.5 0.12 4.2E-06 42.4 10.3 141 16-183 13-165 (377)
100 3vgz_A Uncharacterized protein 95.4 0.81 2.8E-05 36.8 18.5 141 18-186 188-336 (353)
101 1pby_B Quinohemoprotein amine 95.4 0.46 1.6E-05 37.7 13.2 123 27-172 4-140 (337)
102 2pm7_B Protein transport prote 95.3 0.97 3.3E-05 36.7 16.6 137 12-173 7-152 (297)
103 3v9f_A Two-component system se 95.2 1.1 3.9E-05 42.1 17.3 121 17-155 68-192 (781)
104 3g4e_A Regucalcin; six bladed 95.2 0.49 1.7E-05 38.8 13.1 96 25-145 161-262 (297)
105 3dm0_A Maltose-binding peripla 95.0 2.1 7.1E-05 39.3 18.4 154 15-176 383-571 (694)
106 3v9f_A Two-component system se 95.0 0.62 2.1E-05 43.9 14.9 142 17-185 365-516 (781)
107 2oaj_A Protein SNI1; WD40 repe 95.0 1.2 4E-05 43.7 17.2 142 15-176 489-690 (902)
108 1jmx_B Amine dehydrogenase; ox 95.0 0.66 2.2E-05 37.1 12.9 116 25-162 11-144 (349)
109 3fm0_A Protein CIAO1; WDR39,SG 94.8 1.5 5.1E-05 36.5 16.9 135 14-174 61-202 (345)
110 4a2l_A BT_4663, two-component 94.7 1.7 5.8E-05 41.0 17.0 116 17-155 408-526 (795)
111 1nir_A Nitrite reductase; hemo 94.7 2 6.8E-05 39.4 17.1 126 17-158 181-314 (543)
112 1pby_B Quinohemoprotein amine 94.7 1.3 4.3E-05 35.1 14.7 97 35-163 220-318 (337)
113 4a2l_A BT_4663, two-component 94.5 1.8 6E-05 40.9 16.6 150 17-185 217-378 (795)
114 2xzm_R RACK1; ribosome, transl 94.5 1.8 6E-05 35.8 18.1 152 14-174 21-221 (343)
115 1l0q_A Surface layer protein; 94.5 1.7 5.9E-05 35.7 21.4 131 10-172 27-163 (391)
116 1nir_A Nitrite reductase; hemo 94.5 1.7 5.8E-05 39.9 16.0 103 29-163 154-265 (543)
117 3bg1_A Protein SEC13 homolog; 94.4 0.98 3.3E-05 37.1 12.9 135 12-172 11-156 (316)
118 4h5i_A Guanine nucleotide-exch 94.3 2 6.8E-05 36.4 15.2 150 9-182 171-330 (365)
119 1nr0_A Actin interacting prote 94.2 3.2 0.00011 37.7 18.2 141 16-183 450-599 (611)
120 2iwa_A Glutamine cyclotransfer 94.1 1.4 4.9E-05 38.0 14.0 136 18-162 24-188 (266)
121 3vu4_A KMHSV2; beta-propeller 94.1 0.92 3.2E-05 38.2 12.5 119 28-183 75-214 (355)
122 3iz6_a 40S ribosomal protein R 94.1 1.6 5.6E-05 36.8 14.1 122 16-157 251-377 (380)
123 1jmx_B Amine dehydrogenase; ox 93.7 1.5 5E-05 35.0 12.4 69 25-104 104-185 (349)
124 2ymu_A WD-40 repeat protein; u 93.7 3.3 0.00011 36.0 20.5 136 15-183 427-568 (577)
125 2j04_B YDR362CP, TAU91; beta p 93.4 1.7 6E-05 40.0 14.0 133 17-174 269-405 (524)
126 3hxj_A Pyrrolo-quinoline quino 93.3 0.6 2.1E-05 37.5 9.6 105 17-154 217-323 (330)
127 3dsm_A Uncharacterized protein 93.2 3.2 0.00011 34.7 18.6 120 18-163 47-169 (328)
128 1ri6_A Putative isomerase YBHE 93.1 2.7 9.1E-05 33.3 16.2 110 17-155 40-160 (343)
129 3dm0_A Maltose-binding peripla 93.0 5.4 0.00018 36.6 17.5 132 14-173 472-609 (694)
130 3ott_A Two-component system se 92.9 4.5 0.00016 37.9 16.2 132 17-175 105-240 (758)
131 4e54_B DNA damage-binding prot 92.7 1.3 4.5E-05 38.0 11.4 122 18-166 213-338 (435)
132 3nol_A Glutamine cyclotransfer 92.6 1 3.5E-05 39.4 10.7 36 76-111 183-218 (262)
133 3nok_A Glutaminyl cyclase; bet 92.4 0.54 1.9E-05 41.4 8.7 80 25-110 146-226 (268)
134 2oit_A Nucleoporin 214KDA; NH2 92.3 4.4 0.00015 35.8 14.6 133 15-176 93-250 (434)
135 2oiz_A Aromatic amine dehydrog 92.2 4.9 0.00017 34.3 15.0 122 26-173 213-354 (361)
136 3frx_A Guanine nucleotide-bind 92.0 4.4 0.00015 33.2 19.3 130 14-173 107-244 (319)
137 2z2n_A Virginiamycin B lyase; 92.0 3.6 0.00012 32.1 13.7 109 17-155 185-295 (299)
138 1qks_A Cytochrome CD1 nitrite 91.8 3.6 0.00012 38.6 14.1 100 31-162 174-282 (567)
139 3mbr_X Glutamine cyclotransfer 91.8 2.5 8.7E-05 36.3 12.1 110 25-148 115-228 (243)
140 3hxj_A Pyrrolo-quinoline quino 91.8 0.74 2.5E-05 37.0 8.1 94 25-153 148-242 (330)
141 3fm0_A Protein CIAO1; WDR39,SG 91.8 5 0.00017 33.3 18.8 133 16-175 18-159 (345)
142 1pjx_A Dfpase, DIISOPROPYLFLUO 91.7 4.1 0.00014 32.3 13.5 105 25-153 188-297 (314)
143 4h5i_A Guanine nucleotide-exch 91.7 5.3 0.00018 33.8 13.8 126 25-174 95-227 (365)
144 2pm7_B Protein transport prote 91.6 4.6 0.00016 32.7 15.4 134 15-173 54-211 (297)
145 2ymu_A WD-40 repeat protein; u 91.5 6.5 0.00022 34.1 18.2 128 14-174 262-393 (577)
146 2ghs_A AGR_C_1268P; regucalcin 91.5 5 0.00017 33.5 13.3 103 25-157 62-172 (326)
147 3nok_A Glutaminyl cyclase; bet 91.3 2.9 9.9E-05 36.8 12.1 112 19-162 59-171 (268)
148 3bg1_A Protein SEC13 homolog; 90.8 3.9 0.00013 33.5 11.8 150 14-173 57-219 (316)
149 1ri6_A Putative isomerase YBHE 90.6 5.4 0.00018 31.5 17.8 138 17-173 131-283 (343)
150 3sjl_D Methylamine dehydrogena 90.3 4.5 0.00016 36.7 12.8 111 25-161 239-369 (386)
151 3ott_A Two-component system se 89.9 3.7 0.00013 38.5 12.1 107 17-154 65-173 (758)
152 3mbr_X Glutamine cyclotransfer 89.8 8.9 0.0003 32.9 15.0 114 18-162 24-140 (243)
153 3vu4_A KMHSV2; beta-propeller 89.7 8.1 0.00028 32.3 13.6 99 30-154 155-270 (355)
154 2dg1_A DRP35, lactonase; beta 89.6 7.1 0.00024 31.5 16.6 110 18-155 48-171 (333)
155 2j04_B YDR362CP, TAU91; beta p 89.4 6.8 0.00023 36.0 13.3 128 28-172 177-314 (524)
156 3nol_A Glutamine cyclotransfer 88.5 6.5 0.00022 34.3 12.0 112 19-161 47-161 (262)
157 3e5z_A Putative gluconolactona 87.8 9.2 0.00031 30.5 14.7 64 26-100 42-105 (296)
158 2iwa_A Glutamine cyclotransfer 87.6 8.8 0.0003 33.0 12.2 119 25-156 117-238 (266)
159 2qc5_A Streptogramin B lactona 86.1 10 0.00036 29.4 14.4 118 7-154 9-133 (300)
160 2fp8_A Strictosidine synthase; 85.7 13 0.00043 30.6 11.7 103 25-153 197-311 (322)
161 3g4e_A Regucalcin; six bladed 85.5 13 0.00045 30.1 14.5 100 25-154 26-138 (297)
162 3sjl_D Methylamine dehydrogena 84.9 14 0.00048 33.5 12.5 114 25-162 45-176 (386)
163 2ghs_A AGR_C_1268P; regucalcin 84.0 17 0.00058 30.2 12.2 96 25-146 191-293 (326)
164 3u4y_A Uncharacterized protein 83.4 15 0.00053 29.2 15.9 116 27-173 13-134 (331)
165 1rwi_B Serine/threonine-protei 82.9 14 0.00049 28.4 12.2 111 18-159 27-142 (270)
166 1qks_A Cytochrome CD1 nitrite 82.8 14 0.00049 34.5 12.0 91 7-105 189-286 (567)
167 2hz6_A Endoplasmic reticulum t 81.8 1.1 3.7E-05 38.7 3.8 69 24-103 9-77 (369)
168 4gq1_A NUP37; propeller, trans 81.4 21 0.00072 30.2 11.7 139 25-171 157-302 (393)
169 3dr2_A Exported gluconolactona 81.0 18 0.00061 29.4 10.7 93 25-148 200-300 (305)
170 2mad_H Methylamine dehydrogena 80.7 28 0.00094 30.2 15.2 111 27-162 228-357 (373)
171 2hes_X YDR267CP; beta-propelle 80.4 23 0.00077 29.0 16.3 133 15-173 59-204 (330)
172 3e5z_A Putative gluconolactona 79.7 21 0.00073 28.4 13.0 98 25-155 184-286 (296)
173 1rwi_B Serine/threonine-protei 79.6 19 0.00066 27.7 12.0 111 18-158 70-183 (270)
174 2xzm_R RACK1; ribosome, transl 79.2 25 0.00085 28.8 18.0 141 14-183 118-273 (343)
175 3scy_A Hypothetical bacterial 79.2 24 0.00084 28.7 16.4 134 18-173 158-312 (361)
176 3c75_H MADH, methylamine dehyd 78.9 29 0.001 31.6 12.4 104 34-162 99-216 (426)
177 3u4y_A Uncharacterized protein 78.6 23 0.00079 28.1 16.2 112 18-158 131-255 (331)
178 2ad6_A Methanol dehydrogenase 78.2 38 0.0013 31.3 13.2 61 85-165 444-504 (571)
179 2j04_A TAU60, YPL007P, hypothe 77.5 53 0.0018 31.8 14.3 131 17-175 132-273 (588)
180 3sre_A PON1, serum paraoxonase 77.2 28 0.00094 31.1 11.5 115 25-152 233-354 (355)
181 4gq1_A NUP37; propeller, trans 76.2 34 0.0012 28.9 14.3 152 11-173 183-366 (393)
182 3hfq_A Uncharacterized protein 75.7 30 0.001 27.9 16.8 139 17-173 143-292 (347)
183 2oiz_A Aromatic amine dehydrog 75.3 37 0.0013 28.8 15.6 105 32-161 29-146 (361)
184 1q7f_A NHL, brain tumor CG1071 69.9 38 0.0013 26.5 16.0 114 18-159 167-284 (286)
185 2hz6_A Endoplasmic reticulum t 69.4 9.8 0.00034 32.7 6.4 119 25-175 93-211 (369)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 69.3 39 0.0013 26.5 16.1 114 18-154 21-161 (314)
187 2oit_A Nucleoporin 214KDA; NH2 67.1 65 0.0022 28.2 13.4 102 16-141 151-255 (434)
188 2z2n_A Virginiamycin B lyase; 64.7 46 0.0016 25.6 16.8 107 17-153 17-127 (299)
189 1kb0_A Quinohemoprotein alcoho 64.1 98 0.0034 29.2 14.2 60 85-164 457-516 (677)
190 2w18_A PALB2, fancn, partner a 64.1 85 0.0029 28.4 13.7 23 80-102 198-220 (356)
191 1npe_A Nidogen, entactin; glyc 62.6 19 0.00064 28.6 6.4 69 25-105 179-249 (267)
192 2ad6_A Methanol dehydrogenase 61.1 1E+02 0.0035 28.5 12.0 123 21-163 59-193 (571)
193 2be1_A Serine/threonine-protei 60.5 91 0.0031 27.6 11.4 118 26-164 12-139 (339)
194 2mad_H Methylamine dehydrogena 59.7 40 0.0014 29.2 8.5 78 25-104 78-167 (373)
195 3c75_H MADH, methylamine dehyd 58.6 1.1E+02 0.0037 27.8 14.3 113 25-162 277-409 (426)
196 2qc5_A Streptogramin B lactona 55.5 69 0.0023 24.6 15.3 107 17-153 106-216 (300)
197 2ecf_A Dipeptidyl peptidase IV 51.3 1.2E+02 0.0039 27.5 10.3 105 64-173 39-158 (741)
198 2w18_A PALB2, fancn, partner a 48.9 44 0.0015 30.3 7.2 70 27-102 253-322 (356)
199 1kb0_A Quinohemoprotein alcoho 48.9 1.8E+02 0.006 27.4 12.9 124 21-164 74-208 (677)
200 3no2_A Uncharacterized protein 48.6 1.1E+02 0.0038 25.0 11.3 96 25-146 137-233 (276)
201 1q7f_A NHL, brain tumor CG1071 47.1 1E+02 0.0034 24.1 16.1 113 17-154 32-150 (286)
202 1xip_A Nucleoporin NUP159; bet 46.6 1.6E+02 0.0055 26.3 16.7 126 12-176 86-223 (388)
203 1xip_A Nucleoporin NUP159; bet 45.5 63 0.0021 29.1 7.6 48 129-177 90-137 (388)
204 1yiq_A Quinohemoprotein alcoho 45.0 54 0.0019 31.0 7.4 76 76-164 72-149 (689)
205 1mda_H Methylamine dehydrogena 44.5 94 0.0032 27.4 8.5 67 76-163 33-113 (368)
206 2dg1_A DRP35, lactonase; beta 44.3 1.2E+02 0.0041 24.1 13.9 122 17-162 137-269 (333)
207 3ei3_A DNA damage-binding prot 42.0 1.9E+02 0.0064 29.8 11.3 80 84-184 806-904 (1158)
208 1flg_A Protein (quinoprotein e 41.2 96 0.0033 28.8 8.4 71 75-160 69-141 (582)
209 1w6s_A Methanol dehydrogenase 40.9 2.4E+02 0.0081 26.6 11.5 121 21-159 59-195 (599)
210 1mda_H Methylamine dehydrogena 39.6 1.1E+02 0.0037 27.0 8.1 60 35-104 47-115 (368)
211 1kv9_A Type II quinohemoprotei 39.4 83 0.0028 29.6 7.7 61 85-165 438-498 (668)
212 1flg_A Protein (quinoprotein e 38.8 2.4E+02 0.0082 26.1 13.0 61 84-164 465-525 (582)
213 1kv9_A Type II quinohemoprotei 38.3 2.5E+02 0.0087 26.2 11.6 121 22-163 64-195 (668)
214 3b7f_A Glycosyl hydrolase, BNR 36.3 2E+02 0.0067 24.3 11.8 121 25-160 23-154 (394)
215 3fvz_A Peptidyl-glycine alpha- 35.2 1.8E+02 0.0062 23.6 14.9 107 35-162 70-181 (329)
216 3hrp_A Uncharacterized protein 34.9 2.2E+02 0.0077 24.6 11.0 111 18-155 134-249 (409)
217 3no2_A Uncharacterized protein 32.5 2E+02 0.0069 23.3 12.6 67 26-103 7-73 (276)
218 2qe8_A Uncharacterized protein 32.2 2.1E+02 0.0073 23.5 8.4 77 63-157 68-156 (343)
219 1fwx_A Nitrous oxide reductase 32.0 94 0.0032 30.1 6.9 82 18-104 280-381 (595)
220 1yiq_A Quinohemoprotein alcoho 31.9 1.3E+02 0.0044 28.5 7.7 60 85-164 455-514 (689)
221 3hfq_A Uncharacterized protein 31.7 2E+02 0.0067 23.0 15.8 118 26-162 52-181 (347)
222 2p9w_A MAL S 1 allergenic prot 31.0 2.9E+02 0.0099 24.7 11.9 121 25-156 25-169 (334)
223 2p4o_A Hypothetical protein; p 30.5 2.2E+02 0.0074 23.0 9.7 91 25-146 179-279 (306)
224 2z3z_A Dipeptidyl aminopeptida 28.3 2.2E+02 0.0076 25.5 8.3 64 25-96 324-393 (706)
225 3fvz_A Peptidyl-glycine alpha- 26.8 1.7E+02 0.0057 23.9 6.7 85 18-103 146-236 (329)
226 1ok0_A Tendamistat, alpha-amyl 25.9 41 0.0014 24.7 2.4 20 168-187 42-61 (74)
227 3scy_A Hypothetical bacterial 24.7 2.7E+02 0.0093 22.3 18.2 113 18-155 214-339 (361)
228 1jof_A Carboxy-CIS,CIS-muconat 24.2 3E+02 0.01 22.6 16.4 78 17-98 147-230 (365)
229 2ece_A 462AA long hypothetical 22.3 1.9E+02 0.0066 27.1 6.9 23 82-104 225-247 (462)
230 2qe8_A Uncharacterized protein 22.0 3.3E+02 0.011 22.3 13.6 133 18-153 70-224 (343)
231 1k32_A Tricorn protease; prote 21.3 5.1E+02 0.018 25.0 9.9 74 17-98 381-465 (1045)
232 1jof_A Carboxy-CIS,CIS-muconat 20.9 3.5E+02 0.012 22.1 9.8 62 32-98 117-181 (365)
233 3dr2_A Exported gluconolactona 20.5 3.3E+02 0.011 21.7 12.5 100 26-154 59-177 (305)
No 1
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.85 E-value=0.0022 Score=54.42 Aligned_cols=152 Identities=10% Similarity=0.108 Sum_probs=100.3
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCC--CCceEEEEEeCCcEEEEEe
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPS--TSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~--~~~~Vwsyv~pg~~Vyqw~ 91 (219)
.+.++++-+ ..|-+|..+|.|.||+++.......-.+.|. ..|..++..+. ........-..+..|+.||
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH------APITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC------EEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC------CceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 466777654 7799999999999999997544332222332 24666643221 1122333344556899999
Q ss_pred cccceeeeeeecc-------ccccCCCCcccccccccccccCceeeeEeeecc-eEEEecceeEEEEEecCcceeeeeec
Q psy10905 92 TQARSIVNKLDCS-------KLVPCSESLQSICIEEPLRQDQCHVTSVCILDT-CLYIGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 92 ~~tr~I~~~LD~s-------kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~-~LYIGTtwG~iiVaea~tLrPit~fr 163 (219)
..+++....+.-. ++.|..+.+..+.+.. ......|++|+..++ .|+.|..-|.|.+-+..+.+++..+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG--IRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC--CCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecc--cccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 9999988888743 3444444443333222 125667999999875 68889889999999999999999999
Q ss_pred ccccceeEEeee
Q psy10905 164 PYEELVTAILPL 175 (219)
Q Consensus 164 p~e~~V~~Ii~l 175 (219)
++......+.++
T Consensus 368 ~~~~~~~~~~~~ 379 (437)
T 3gre_A 368 SPSRFSDVFIPT 379 (437)
T ss_dssp CC--CCCEEEEE
T ss_pred cccccCceEEEE
Confidence 877666555554
No 2
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.81 E-value=0.004 Score=50.09 Aligned_cols=172 Identities=12% Similarity=0.088 Sum_probs=108.0
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
..+.+++.-+ ..|-+|..+|.|.||++++..... ...|..+ |..+.-.+............+-.|+.||.
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~------v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ--IAQHDAP------VKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--EEECSSC------EEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee--eccccCc------eEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 3467777765 679999999999999999776543 3345443 44444211112223333444567899999
Q ss_pred ccceeeeeeeccc-----------------------------------------------------------cccCCCC-
Q psy10905 93 QARSIVNKLDCSK-----------------------------------------------------------LVPCSES- 112 (219)
Q Consensus 93 ~tr~I~~~LD~sk-----------------------------------------------------------l~PcSEs- 112 (219)
.+++...+++... ++-+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 159 RSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG 238 (368)
T ss_dssp SCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS
T ss_pred CCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC
Confidence 8888777766432 1111110
Q ss_pred -ccccccccc--------ccccCc------------eeeeEeeec--ceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 113 -LQSICIEEP--------LRQDQC------------HVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 113 -l~si~iee~--------l~~~~~------------qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
++-.+++.. +..... .|++++... ..|+.|..-|.|-+-|..+.+++..+..|.+.|
T Consensus 239 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v 318 (368)
T 3mmy_A 239 RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPI 318 (368)
T ss_dssp EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCE
T ss_pred cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCc
Confidence 000011100 000011 489998865 589999999999999999999999999999999
Q ss_pred eEEeeec-C-eEEEe-ccccccceeecc
Q psy10905 170 TAILPLG-G-DIVTI-GRGYRSLVSRYT 194 (219)
Q Consensus 170 ~~Ii~l~-g-~l~Ti-G~GyR~L~~r~~ 194 (219)
+.+.--+ | .|++. ++||...++-|.
T Consensus 319 ~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 319 SACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred eEEEECCCCCeEEEEecccccccccccC
Confidence 9886443 4 35555 447766666554
No 3
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.73 E-value=0.0031 Score=50.23 Aligned_cols=143 Identities=13% Similarity=0.139 Sum_probs=94.2
Q ss_pred EEeeCCCceeeeeeeec--ceeeecccCCcEEEEEccCCceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCC
Q psy10905 8 LTELGASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG 84 (219)
Q Consensus 8 ltelg~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg 84 (219)
+..++....+.+++.-+ .-|-+|. +|.|.||++..+... ....+.... .+..+..++-.+ +...+.+. ..+
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~-~~~~l~~~-~~d 118 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLN---RDNYIRSCKLLP-DGCTLIVG-GEA 118 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSC---TTSBEEEEEECT-TSSEEEEE-ESS
T ss_pred ceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccC---CCCcEEEEEEcC-CCCEEEEE-cCC
Confidence 34556666677888776 6788887 999999999865322 222221100 122466665444 33344443 445
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeee
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~f 162 (219)
..|+.||.++++...... +. .....|++++... ..|++|..-|.|.+-+..+.+++..+
T Consensus 119 ~~i~~~d~~~~~~~~~~~---------------~~----~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAE---------------LT----SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp SEEEEEECCCC--EEEEE---------------EE----CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CcEEEEECCCCCcceeee---------------cc----cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee
Confidence 689999998876322111 11 1234577777753 68999999999999999999999999
Q ss_pred cccccceeEEeee
Q psy10905 163 RPYEELVTAILPL 175 (219)
Q Consensus 163 rp~e~~V~~Ii~l 175 (219)
+.|.+.|+++.--
T Consensus 180 ~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 180 QGHTDGASCIDIS 192 (337)
T ss_dssp CCCSSCEEEEEEC
T ss_pred ecccCceEEEEEC
Confidence 9999999988654
No 4
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.0095 Score=47.03 Aligned_cols=135 Identities=11% Similarity=0.065 Sum_probs=93.4
Q ss_pred ceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 15 SVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 15 ~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..+.+++..+ ..|.+|..+|.|.+|+.. .........|. ..+..++..+ +. . ......+..|+.||
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~------~~i~~~~~~~-~~-~-~~~~~~dg~i~i~d 211 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHN------DVVRHLAVVD-DG-H-FISCSNDGLIKLVD 211 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCS------SCEEEEEEEE-TT-E-EEEEETTSEEEEEE
T ss_pred CceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCc------ccEEEEEEcC-CC-e-EEEccCCCeEEEEE
Confidence 3356676664 789999999999999733 21111111132 2355555322 22 2 34455566899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEEecceeEEEEEecCcceeeeeeccccccee
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVT 170 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~ 170 (219)
..+++...++. .....|++++... ++|+.|..-|.|.+-+..+-+++..+..+.+.|.
T Consensus 212 ~~~~~~~~~~~---------------------~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~ 270 (313)
T 3odt_A 212 MHTGDVLRTYE---------------------GHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIW 270 (313)
T ss_dssp TTTCCEEEEEE---------------------CCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEE
T ss_pred CCchhhhhhhh---------------------cCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEE
Confidence 99988776653 1234578888875 4899999999999999999999999999999999
Q ss_pred EEeeec-CeEEE
Q psy10905 171 AILPLG-GDIVT 181 (219)
Q Consensus 171 ~Ii~l~-g~l~T 181 (219)
++.--+ |.+++
T Consensus 271 ~~~~~~~~~~~~ 282 (313)
T 3odt_A 271 SVDCMSNGDIIV 282 (313)
T ss_dssp EEEECTTSCEEE
T ss_pred EEEEccCCCEEE
Confidence 887554 44554
No 5
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.70 E-value=0.0047 Score=53.11 Aligned_cols=136 Identities=18% Similarity=0.194 Sum_probs=97.3
Q ss_pred eeeeeeeecceeeecccCCcEEEEEccCCc-eEe-eeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 16 VLHAITAVPGELWCGESDGNISIYTMSEHS-VTS-HDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 16 ~i~s~a~v~~eLW~G~~~g~Isi~~l~~~~-vs~-~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
.+.+++.-+..|-+|..+|.|.+|+++... +.. .....|.. .|..+. -+...+.+.- -+..|+.||.+
T Consensus 215 ~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~------~v~~~~---~~~~~l~s~~-~dg~i~vwd~~ 284 (435)
T 1p22_A 215 AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------AVNVVD---FDDKYIVSAS-GDRTIKVWNTS 284 (435)
T ss_dssp CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS------CEEEEE---EETTEEEEEE-TTSEEEEEETT
T ss_pred cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC------cEEEEE---eCCCEEEEEe-CCCeEEEEECC
Confidence 356666655888999999999999988553 222 22233322 355554 2334444443 45678999999
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccccceeEEe
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAIL 173 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii 173 (219)
+++...++.- ....|++++..++.|..|..-|.|-+-|..+.+++..++.|.+.|+++.
T Consensus 285 ~~~~~~~~~~---------------------~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 343 (435)
T 1p22_A 285 TCEFVRTLNG---------------------HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 343 (435)
T ss_dssp TCCEEEEEEC---------------------CSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred cCcEEEEEcC---------------------CCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEE
Confidence 9887766531 2345788888899999999999999999999999999999999999987
Q ss_pred eecC-eEEEec
Q psy10905 174 PLGG-DIVTIG 183 (219)
Q Consensus 174 ~l~g-~l~TiG 183 (219)
. +| .|++.+
T Consensus 344 ~-~~~~l~sg~ 353 (435)
T 1p22_A 344 F-DNKRIVSGA 353 (435)
T ss_dssp C-CSSEEEEEE
T ss_pred e-cCCEEEEEe
Confidence 7 55 344444
No 6
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.69 E-value=0.0069 Score=51.95 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=71.7
Q ss_pred eeeeeeeecceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 16 VLHAITAVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 16 ~i~s~a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
.+.+++.-+.-|.+|..+|.|.+|++.++.... ..-.|.. .|..+.- +...+ .....+..|+.||.+++
T Consensus 161 ~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~h~~------~v~~~~~---~~~~l-~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 161 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIH-TLYGHTS------TVRCMHL---HEKRV-VSGSRDATLRVWDIETG 229 (445)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEEE-EECCCSS------CEEEEEE---ETTEE-EEEETTSEEEEEESSSC
T ss_pred CEEEEEecCCEEEEEeCCCeEEEEECCcCcEEE-EECCCCC------cEEEEEe---cCCEE-EEEeCCCEEEEEECCCC
Confidence 356666656789999999999999988664332 1113332 3555552 23333 33445667999999988
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccccceeEEee
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILP 174 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~ 174 (219)
+....+.- ....|++++..++.|+.|..-|.|.+-|..+.+++..+..|.+.|.++..
T Consensus 230 ~~~~~~~~---------------------~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 230 QCLHVLMG---------------------HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp CEEEEEEC---------------------CSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred cEEEEEcC---------------------CcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 87666532 12234444444445555555555555555444555555555555444443
No 7
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.65 E-value=0.012 Score=50.52 Aligned_cols=139 Identities=12% Similarity=0.097 Sum_probs=93.0
Q ss_pred ceeeeeeeecceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 15 SVLHAITAVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 15 ~~i~s~a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
..+.+++.=...|.+|..+|.|.||+++++..... .-.|.+ .|..+.- +...+. ....+..|+.||.++
T Consensus 174 ~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~------~v~~l~~---~~~~l~-s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 174 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNT-LIHHCE------AVLHLRF---NNGMMV-TCSKDRSIAVWDMAS 242 (435)
T ss_dssp SCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEE-ECCCCS------CEEEEEC---CTTEEE-EEETTSCEEEEECSS
T ss_pred CcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEE-EcCCCC------cEEEEEE---cCCEEE-EeeCCCcEEEEeCCC
Confidence 34666666337888888888999998876543311 112322 3555552 233333 334456788888877
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccccceeEEee
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILP 174 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~ 174 (219)
++...... .+......|++++..+++|+.|..-|.|.+-|..+.+++..+..|.+.|.++..
T Consensus 243 ~~~~~~~~------------------~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 304 (435)
T 1p22_A 243 PTDITLRR------------------VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 304 (435)
T ss_dssp SSCCEEEE------------------EECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCceeee------------------EecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe
Confidence 65332110 112345678899999999999999999999999999999999999999998765
Q ss_pred ecC-eEEEec
Q psy10905 175 LGG-DIVTIG 183 (219)
Q Consensus 175 l~g-~l~TiG 183 (219)
+| .+++.+
T Consensus 305 -~~~~l~~g~ 313 (435)
T 1p22_A 305 -RDRLVVSGS 313 (435)
T ss_dssp -ETTEEEEEE
T ss_pred -CCCEEEEEe
Confidence 43 344433
No 8
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.62 E-value=0.011 Score=47.06 Aligned_cols=134 Identities=13% Similarity=0.187 Sum_probs=91.1
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
+....+.+++.-+ ..|.+|..+|.|.+|+++.........+.... ..+..++-.+ +...+.+.- .+..|+.
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~i~~~~~~~-~~~~l~~~~-~dg~v~~ 167 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISP-DSKVCFSCC-SDGNIAV 167 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSS-----SCEEEEEECT-TSSEEEEEE-TTSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCC-----CceEEEEECC-CCCEEEEEe-CCCcEEE
Confidence 3444577777776 67999999999999999876543333332212 2355665433 334454444 4456999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
||.++++...++.. ....|++++.. +..|+.|+.-|.|.+-|..+.+++..+ ++.+
T Consensus 168 ~d~~~~~~~~~~~~---------------------~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~ 225 (337)
T 1gxr_A 168 WDLHNQTLVRQFQG---------------------HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTS 225 (337)
T ss_dssp EETTTTEEEEEECC---------------------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSS
T ss_pred EeCCCCceeeeeec---------------------ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-cCCC
Confidence 99999887665431 22357777775 468999999999999999999888876 4777
Q ss_pred ceeEEee
Q psy10905 168 LVTAILP 174 (219)
Q Consensus 168 ~V~~Ii~ 174 (219)
.|..+.-
T Consensus 226 ~v~~~~~ 232 (337)
T 1gxr_A 226 QIFSLGY 232 (337)
T ss_dssp CEEEEEE
T ss_pred ceEEEEE
Confidence 8877654
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.58 E-value=0.007 Score=51.90 Aligned_cols=145 Identities=14% Similarity=0.228 Sum_probs=97.5
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
|-...+.++++-+ ..|=+|..+|.|.||+++.+... ...-.|.+ .|..++-.+ +...+......+..|+.
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~-~~~~~h~~------~V~~~~~~~-~~~~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL-SSYRAHAA------QVTCVAASP-HKDSVFLSCSEDNRILL 196 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EEECCCSS------CEEEEEECS-SCTTEEEEEETTSCEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-EEEcCcCC------ceEEEEecC-CCCCceeeecccccccc
Confidence 3334477777766 78999999999999999876443 22223533 366665433 33346656666778999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCcceeeeeecccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDSLRPITVFRPYE 166 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~tLrPit~frp~e 166 (219)
||.++++...++.... ....|++++... ..|..|..-|.|-+-|..+.+++..|+.|.
T Consensus 197 wd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~ 257 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSA-------------------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS 257 (344)
T ss_dssp EETTSSSCEEECC-----------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS
T ss_pred ccccccceeeeeecce-------------------eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC
Confidence 9999998777664321 223466777653 345668888999999999999999999999
Q ss_pred cceeEEeee-cC--eEEEec
Q psy10905 167 ELVTAILPL-GG--DIVTIG 183 (219)
Q Consensus 167 ~~V~~Ii~l-~g--~l~TiG 183 (219)
+.|+++.-- +| -|+|.+
T Consensus 258 ~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEE
T ss_pred CCEEEEEEccCCCeEEEEEe
Confidence 999998633 23 255554
No 10
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.58 E-value=0.0085 Score=51.22 Aligned_cols=153 Identities=13% Similarity=0.084 Sum_probs=98.3
Q ss_pred Cceeeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 14 SSVLHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 14 ~~~i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
...+.+++.-+ ..|-+|..+|.|.||+++++.... ..-.|.. .|..+...+............+..|+.||.
T Consensus 162 ~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~-~~~~h~~------~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~ 234 (464)
T 3v7d_B 162 DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTH-VFEGHNS------TVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 234 (464)
T ss_dssp SSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEE-EECCCSS------CEEEEEEEESSSCEEEEEEETTSCEEEEEC
T ss_pred CcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEE-EECCCCC------ccEEEEEecCCCCCEEEEEcCCCcEEEeeC
Confidence 44467777765 578899999999999998764321 1112433 355554322222233344455667999999
Q ss_pred ccceeeeeeeccccccC-----CCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 93 QARSIVNKLDCSKLVPC-----SESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 93 ~tr~I~~~LD~skl~Pc-----SEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
.+++.........-.|. .++...+. .+......|.++...++.|+.|..-|.|.+-|..+.+++..+.+|.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 311 (464)
T 3v7d_B 235 PKESSVPDHGEEHDYPLVFHTPEENPYFVG---VLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD 311 (464)
T ss_dssp CCCCCC------CCSSEEESCGGGCTTEEE---EECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCcccccccccCCcceEeeccCCCeEEEE---EccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 98876655443321110 00000011 12335567888888899999999999999999999999999999999
Q ss_pred ceeEEeeec
Q psy10905 168 LVTAILPLG 176 (219)
Q Consensus 168 ~V~~Ii~l~ 176 (219)
.|.++.--+
T Consensus 312 ~v~~~~~~~ 320 (464)
T 3v7d_B 312 RIYSTIYDH 320 (464)
T ss_dssp CEEEEEEET
T ss_pred CEEEEEEcC
Confidence 998887543
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.53 E-value=0.0039 Score=53.06 Aligned_cols=146 Identities=12% Similarity=0.172 Sum_probs=100.5
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
|-...+.++++-+ ..|=+|..+|.|.||+++....... .-.|.. .|..++..+ +...+......+-.|+.
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~-~~~h~~------~v~~v~~s~-~~~~~~~s~~~dg~v~~ 208 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS-YNAHSS------EVNCVAACP-GKDTIFLSCGEDGRILL 208 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE-ECCCSS------CEEEEEECT-TCSSCEEEEETTSCEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-EcCCCC------CEEEEEEcc-CCCceeeeeccCCceEE
Confidence 4344577887776 7888999999999999987644321 112332 366665433 33345555666778999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCcceeeeeecccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDSLRPITVFRPYE 166 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~tLrPit~frp~e 166 (219)
||.++++....+.. ......|++++... ..|..|..-|.|-+-|..+.+++..++.+.
T Consensus 209 wd~~~~~~~~~~~~-------------------~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~ 269 (357)
T 4g56_B 209 WDTRKPKPATRIDF-------------------CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS 269 (357)
T ss_dssp CCTTSSSCBCBCCC-------------------TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS
T ss_pred EECCCCceeeeeee-------------------ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc
Confidence 99988765544322 12445678888752 467789999999999999999999999999
Q ss_pred cceeEEeee-cC--eEEEecc
Q psy10905 167 ELVTAILPL-GG--DIVTIGR 184 (219)
Q Consensus 167 ~~V~~Ii~l-~g--~l~TiG~ 184 (219)
+.|+++.-- +| -|+|.+.
T Consensus 270 ~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 270 QNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp SCEEEEEECSSSSCCEEEEET
T ss_pred eeEEEEEEcCCCCCEEEEEeC
Confidence 999988632 33 2666553
No 12
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.53 E-value=0.014 Score=46.95 Aligned_cols=159 Identities=11% Similarity=0.086 Sum_probs=104.5
Q ss_pred CCceeeeeeeecceeeecccCCcEEEEEccC-CceEe-eeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 13 ASSVLHAITAVPGELWCGESDGNISIYTMSE-HSVTS-HDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 13 ~~~~i~s~a~v~~eLW~G~~~g~Isi~~l~~-~~vs~-~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
.+..+.+++.-+..+.+|..+|.|.+|+++. ..... .....|. ..+..++-.+.+...+.+ ..-+-.|+.|
T Consensus 149 ~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~i~~i~~~~~~~~~l~~-~~~dg~i~i~ 221 (342)
T 1yfq_A 149 VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK------YQIRDVALLPKEQEGYAC-SSIDGRVAVE 221 (342)
T ss_dssp SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCS------SCEEEEEECSGGGCEEEE-EETTSEEEEE
T ss_pred eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCC------CceeEEEECCCCCCEEEE-EecCCcEEEE
Confidence 3445778887776699999999999999987 43221 1122222 245666533212333433 3446678899
Q ss_pred ecccc------eeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeee
Q psy10905 91 DTQAR------SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 91 ~~~tr------~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~f 162 (219)
+.+++ +....+.+.+-.+.. ......|++++.. +..|+.|..-|.|.+-+..+.+++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKD------------TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTC------------CSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EEcCCCcccccccceeeecccccccc------------cccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 98876 555555443211100 1234578888885 477999999999999999999999999
Q ss_pred ccc-ccceeEEeeecCe-EEEe-cccc-cccee
Q psy10905 163 RPY-EELVTAILPLGGD-IVTI-GRGY-RSLVS 191 (219)
Q Consensus 163 rp~-e~~V~~Ii~l~g~-l~Ti-G~Gy-R~L~~ 191 (219)
..| .+.|.++. -+|. |++. .+|| ....+
T Consensus 290 ~~~h~~~v~~~~-~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 290 AKFNEDSVVKIA-CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CCCSSSEEEEEE-ECSSEEEEEEECTHHHHCSS
T ss_pred hcccCCCceEec-CCCCeEEEEecCCccccccc
Confidence 999 99999999 5664 4443 4676 44443
No 13
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.53 E-value=0.0028 Score=51.09 Aligned_cols=152 Identities=12% Similarity=0.065 Sum_probs=96.3
Q ss_pred Cceeeeeeeec---ceeeecccCCcEEEEEccCCceEeee-e-eeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 14 SSVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHD-T-VNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 14 ~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~-~-l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
...+.+++.-+ ..|-+|..+|.|.||+++........ . -.|. ..|..++-.+ +...+.+ ...+-.|+
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~v~~~~~~~-~~~~l~~-~~~dg~i~ 186 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR------DEVLSADYDL-LGEKIMS-CGMDHSLK 186 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS------SCEEEEEECT-TSSEEEE-EETTSCEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc------CceeEEEECC-CCCEEEE-ecCCCCEE
Confidence 44477777764 67999999999999999876433221 1 1232 2466666444 3333443 34466899
Q ss_pred EEecccceeeeeeeccc-cccCCCCccccccccc------ccccCceeeeEeeecceEEEecceeEEEEEecCccee---
Q psy10905 89 QWDTQARSIVNKLDCSK-LVPCSESLQSICIEEP------LRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRP--- 158 (219)
Q Consensus 89 qw~~~tr~I~~~LD~sk-l~PcSEsl~si~iee~------l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrP--- 158 (219)
.||.++++....++... +.|-...+.......+ +......|++++..++.|..|..-|.|.+-+..+.++
T Consensus 187 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 266 (366)
T 3k26_A 187 LWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDID 266 (366)
T ss_dssp EEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGG
T ss_pred EEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCcccccc
Confidence 99999998877665421 2222211111111100 1125667999999999999999999999999877643
Q ss_pred -----------eeeecccccceeEEe
Q psy10905 159 -----------ITVFRPYEELVTAIL 173 (219)
Q Consensus 159 -----------it~frp~e~~V~~Ii 173 (219)
+..+..+.+.|.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~ 292 (366)
T 3k26_A 267 KIKPSESNVTILGRFDYSQCDIWYMR 292 (366)
T ss_dssp GCCTTCCCEEEEEEEECSSCCSSCCC
T ss_pred ccccCCcchheeccccccCCcEEEEE
Confidence 666666666665543
No 14
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.52 E-value=0.015 Score=50.72 Aligned_cols=133 Identities=14% Similarity=0.014 Sum_probs=95.3
Q ss_pred eeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeee---eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 16 VLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTV---NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 16 ~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l---~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
.+.+++.-+ ..|-+|..+|.|.+|++++........- .|.. .|..+.-. +...+. ....+..|+.
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~------~v~~~~~~--~~~~l~-~~~~d~~i~~ 278 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG------GIFALSWL--DSQKFA-TVGADATIRV 278 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS------CEEEEEES--SSSEEE-EEETTSEEEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCC------ceEEEEEc--CCCEEE-EEcCCCcEEE
Confidence 467777765 4799999999999999987654322111 3432 46666542 333343 3445667999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEee-ecceEEEecceeEEEEEecCcceeeeeecccccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI-LDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEEL 168 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~-~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~ 168 (219)
||..+++...++...+ ......+.++.. .++.+..|+.-|.|.+-+..+.+|+..++.|.+.
T Consensus 279 wd~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 341 (615)
T 1pgu_A 279 WDVTTSKCVQKWTLDK-----------------QQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKG 341 (615)
T ss_dssp EETTTTEEEEEEECCT-----------------TCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSC
T ss_pred EECCCCcEEEEEcCCC-----------------CcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCC
Confidence 9999999888877553 112233444444 6799999999999999999999999999999999
Q ss_pred eeEEee
Q psy10905 169 VTAILP 174 (219)
Q Consensus 169 V~~Ii~ 174 (219)
|+++..
T Consensus 342 v~~~~~ 347 (615)
T 1pgu_A 342 ITALTV 347 (615)
T ss_dssp EEEEET
T ss_pred EEEEEe
Confidence 988876
No 15
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.51 E-value=0.012 Score=50.56 Aligned_cols=128 Identities=11% Similarity=0.134 Sum_probs=94.0
Q ss_pred eeeeeeecceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce
Q psy10905 17 LHAITAVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS 96 (219)
Q Consensus 17 i~s~a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~ 96 (219)
+.+++.=...|-+|..+|.|.||++.+...... .-.|.. .|..+.. +...+.+ ...+..|+.||.++++
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~------~v~~~~~---~~~~l~s-~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT-LVGHTG------GVWSSQM---RDNIIIS-GSTDRTLKVWNAETGE 190 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEEE-CCCCSS------CEEEEEE---ETTEEEE-EETTSCEEEEETTTTE
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEE-EcCCCC------CEEEEEe---cCCEEEE-EeCCCeEEEEECCcCc
Confidence 444444348899999999999999986654321 113433 3555552 2333433 3456679999999988
Q ss_pred eeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccccceeEEeeec
Q psy10905 97 IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPLG 176 (219)
Q Consensus 97 I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l~ 176 (219)
...++. .....|++++..++.|+.|..-|.|.+-+..+-+++..++.|.+.|+++.. +
T Consensus 191 ~~~~~~---------------------~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~ 248 (445)
T 2ovr_B 191 CIHTLY---------------------GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 248 (445)
T ss_dssp EEEEEC---------------------CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-C
T ss_pred EEEEEC---------------------CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-C
Confidence 766542 123468889999999999999999999999999999999999999999876 5
Q ss_pred C
Q psy10905 177 G 177 (219)
Q Consensus 177 g 177 (219)
|
T Consensus 249 ~ 249 (445)
T 2ovr_B 249 G 249 (445)
T ss_dssp S
T ss_pred C
Confidence 5
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.02 Score=46.02 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=93.2
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
+.+++.-+ ..|-+|..+|.|.+|+++...-.....-.|.. .|..++-.+ +...+.+. ..+..|+.||..+
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~v~~~~~~~-~~~~l~~~-~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK------SISDMQFSP-DLTYFITS-SRDTNSFLVDVST 249 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS------CEEEEEECT-TSSEEEEE-ETTSEEEEEETTT
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC------ceeEEEECC-CCCEEEEe-cCCceEEEEECCC
Confidence 45555544 68899999999999999874333333333433 366665433 34444444 4556899999999
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEeccee--------------EEEEEecCccee
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWG--------------CIVVAEKDSLRP 158 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG--------------~iiVaea~tLrP 158 (219)
++....++.. ..+++++.. +..+++|..-| .|.+-+..+.++
T Consensus 250 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 250 LQVLKKYETD----------------------CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp CCEEEEEECS----------------------SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE
T ss_pred CceeeeecCC----------------------CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 9888777621 123444443 47788887777 899999999999
Q ss_pred eeeecccccceeEEeeec-C-eEEEec
Q psy10905 159 ITVFRPYEELVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 159 it~frp~e~~V~~Ii~l~-g-~l~TiG 183 (219)
+..+..|.+.|+++.--+ | .|+|.|
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred hhheecccCcEEEEEECCCCCEEEEEc
Confidence 999999999999876443 4 355554
No 17
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.48 E-value=0.011 Score=51.44 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=97.6
Q ss_pred CCceeeeeeeecceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 13 ASSVLHAITAVPGELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 13 ~~~~i~s~a~v~~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
....+.++++-...|-+|.. +|.|.+|++.+..+.......|. ..|..++-++ +...+.+. .-+-.|+.||
T Consensus 445 ~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~------~~v~~~~~s~-~g~~l~~~-~~dg~i~iw~ 516 (615)
T 1pgu_A 445 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR------AKPSYISISP-SETYIAAG-DVMGKILLYD 516 (615)
T ss_dssp CSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCS------SCEEEEEECT-TSSEEEEE-ETTSCEEEEE
T ss_pred cCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCcc------CceEEEEECC-CCCEEEEc-CCCCeEEEee
Confidence 33445566555678888988 99999999886544322222232 3466776443 33444443 4456799999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEee------------ecceEEEecceeEEEEEecCcc-ee
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI------------LDTCLYIGTTWGCIVVAEKDSL-RP 158 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~------------~~~~LYIGTtwG~iiVaea~tL-rP 158 (219)
.++++...++.. +....|++++. .+..|..|..-|.|-+-+..+. ++
T Consensus 517 ~~~~~~~~~~~~--------------------~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 576 (615)
T 1pgu_A 517 LQSREVKTSRWA--------------------FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI 576 (615)
T ss_dssp TTTTEEEECCSC--------------------CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC
T ss_pred CCCCcceeEeec--------------------CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCcee
Confidence 999988655321 12356777777 4578889999999999999888 89
Q ss_pred eeeecccccceeEEeeec-CeEEEec
Q psy10905 159 ITVFRPYEELVTAILPLG-GDIVTIG 183 (219)
Q Consensus 159 it~frp~e~~V~~Ii~l~-g~l~TiG 183 (219)
+..++.|.+.|.++.-.+ |.|+|.|
T Consensus 577 ~~~~~~h~~~v~~l~~s~~~~l~s~~ 602 (615)
T 1pgu_A 577 IKALNAHKDGVNNLLWETPSTLVSSG 602 (615)
T ss_dssp EEETTSSTTCEEEEEEEETTEEEEEE
T ss_pred chhhhcCccceEEEEEcCCCCeEEec
Confidence 999999999999886443 3355544
No 18
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.032 Score=45.73 Aligned_cols=152 Identities=10% Similarity=0.087 Sum_probs=98.3
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
.+.+++.-+ ..|-+|..+|.|.||+.+...+... -.|.. .|..++-.+ +...+.+. ..+..|+.||.+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~--~~~~~------~v~~~~~~~-~~~~l~~~-~~d~~i~iwd~~ 179 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVL--NFHRA------PIVSVKWNK-DGTHIISM-DVENVTILWNVI 179 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE--CCCCS------CEEEEEECT-TSSEEEEE-ETTCCEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeec--cCCCc------cEEEEEECC-CCCEEEEE-ecCCeEEEEECC
Confidence 467777766 7899999999999998443332221 12322 466665433 34445544 445678999999
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEEecceeEEEEEecCcceeeeeecccccceeEE
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAI 172 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~I 172 (219)
+++...++...+--+. .+. ... .......|.+++... +.+++|+.-|.|.+.+..+-+++..+.++.+.|+++
T Consensus 180 ~~~~~~~~~~~~~~~~--~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~ 253 (425)
T 1r5m_A 180 SGTVMQHFELKETGGS--SIN---AEN-HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVL 253 (425)
T ss_dssp TTEEEEEECCC---------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEE
T ss_pred CCcEEEEeeccccCcc--cee---ecc-ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEE
Confidence 9999988876542211 111 111 122333366666644 889999999999999999999999999999999988
Q ss_pred eeec-C-eEEEec
Q psy10905 173 LPLG-G-DIVTIG 183 (219)
Q Consensus 173 i~l~-g-~l~TiG 183 (219)
.--+ | .|++.+
T Consensus 254 ~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 254 EFNDTNKLLLSAS 266 (425)
T ss_dssp EEETTTTEEEEEE
T ss_pred EECCCCCEEEEEc
Confidence 7654 3 355544
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.028 Score=45.07 Aligned_cols=145 Identities=12% Similarity=0.069 Sum_probs=98.8
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeC----CcEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYP----GCSV 87 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~p----g~~V 87 (219)
...+.+++.-+ ..|-+|..+|.|.+|+++........ .|.. ++..+.-.+ +...+...... ...|
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~------~v~~~~~~~-~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW--KSPV------PVKRVEFSP-CGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--ECSS------CEEEEEECT-TSSEEEEEECCBTTBCCEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ecCC------CeEEEEEcc-CCCEEEEecCCccCCCCEE
Confidence 33467777765 77889999999999999876544322 2433 355555433 33444444433 2679
Q ss_pred EEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCc-ceeeeeecc
Q psy10905 88 YQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDS-LRPITVFRP 164 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~t-LrPit~frp 164 (219)
+.||..+.+....+...+- +.+..+ ..| .....|++++... ..|++|+.-|.|.+-|..+ .+++..+..
T Consensus 145 ~~~d~~~~~~~~~~~~~~~----~~~~~~--~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSE----EPIHKI--ITH--EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp EEEEEEECTTTCCEEEECS----SCSEEE--ECC--TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC
T ss_pred EEEEecCCccceeeccccc----ceeeec--cCC--cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec
Confidence 9999998877666554321 122222 221 2444788888864 6899999999999999998 899999999
Q ss_pred cccceeEEeee
Q psy10905 165 YEELVTAILPL 175 (219)
Q Consensus 165 ~e~~V~~Ii~l 175 (219)
+.+.|+.+.--
T Consensus 217 ~~~~v~~~~~~ 227 (369)
T 3zwl_B 217 HEKSISDMQFS 227 (369)
T ss_dssp CSSCEEEEEEC
T ss_pred CCCceeEEEEC
Confidence 99999988754
No 20
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.45 E-value=0.037 Score=46.75 Aligned_cols=142 Identities=16% Similarity=0.164 Sum_probs=96.9
Q ss_pred eeeeeeeec---ceeeecccCCcEEEEEccCCceE-----ee-eeeeccCCccccceeEEEeecCCCCceEEEEEeCCcE
Q psy10905 16 VLHAITAVP---GELWCGESDGNISIYTMSEHSVT-----SH-DTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCS 86 (219)
Q Consensus 16 ~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs-----~~-~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~ 86 (219)
.+.+++.-+ ..|-+|..+|.|.||++.++... .. ..-.|.. .|..++-.+.+.. +.....-+..
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~------~v~~~~~~p~~~~-~l~s~~~dg~ 155 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK------RVGIVAWHPTAQN-VLLSAGCDNV 155 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS------CEEEEEECSSBTT-EEEEEETTSC
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC------eEEEEEECcCCCC-EEEEEcCCCE
Confidence 366777654 67899999999999999876431 11 1122432 4666664443323 3334455667
Q ss_pred EEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeee-c
Q psy10905 87 VYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVF-R 163 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~f-r 163 (219)
|+.||.++++...++.. . .....|++++.. +.+|+.|..-|.|.+-|..+.+++..+ .
T Consensus 156 i~iwd~~~~~~~~~~~~---------------~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 216 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGP---------------D----VHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR 216 (402)
T ss_dssp EEEEETTTTEEEEEECT---------------T----TCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCCccEEEec---------------C----CCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc
Confidence 99999999887766531 1 123467888885 478999999999999999999999999 8
Q ss_pred ccccc-eeEEeee-cCeEEEec
Q psy10905 164 PYEEL-VTAILPL-GGDIVTIG 183 (219)
Q Consensus 164 p~e~~-V~~Ii~l-~g~l~TiG 183 (219)
+|++. +..+.-. +|.++..|
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp SSCSSSCCEEEECSTTEEEEEE
T ss_pred CCCCCcceEEEEcCCCcEEEEe
Confidence 89886 6655543 35566655
No 21
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.022 Score=49.26 Aligned_cols=154 Identities=14% Similarity=0.136 Sum_probs=103.2
Q ss_pred eeeeeeeecc-----eeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 16 VLHAITAVPG-----ELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 16 ~i~s~a~v~~-----eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
.+.+++.-+. .|-+|..+|.|.||+++...........|.. .|..++-. +...+.+ ...+..|+.|
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~------~v~~~~~s--d~~~l~s-~~~d~~v~vw 267 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH------FVSSICCG--KDYLLLS-AGGDDKIFAW 267 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS------CEEEEEEC--STTEEEE-EESSSEEEEE
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC------ceEEEEEC--CCCEEEE-EeCCCeEEEE
Confidence 3666666654 6889999999999999866543332234533 46666643 3333443 3466789999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccc----------cccCceeeeEeee--cceEEEec-ceeEEEEEec----
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPL----------RQDQCHVTSVCIL--DTCLYIGT-TWGCIVVAEK---- 153 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l----------~~~~~qVtaL~~~--~~~LYIGT-twG~iiVaea---- 153 (219)
|..+++.+..++....+. ++....|. ......|++++.. +..||+|. .-|.|.+-+.
T Consensus 268 d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~ 341 (450)
T 2vdu_B 268 DWKTGKNLSTFDYNSLIK------PYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ 341 (450)
T ss_dssp ETTTCCEEEEEECHHHHG------GGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS
T ss_pred ECCCCcEeeeecchhhhh------hhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC
Confidence 999999999988654211 11111111 1244568888887 57899998 8899999988
Q ss_pred -CcceeeeeecccccceeEEeeecC-eEEEeccc
Q psy10905 154 -DSLRPITVFRPYEELVTAILPLGG-DIVTIGRG 185 (219)
Q Consensus 154 -~tLrPit~frp~e~~V~~Ii~l~g-~l~TiG~G 185 (219)
.+|+++..+..+ +.|..+.--++ .+++.++.
T Consensus 342 ~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 342 KGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp TTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred CCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence 667888888877 88888775554 46666654
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.43 E-value=0.028 Score=46.90 Aligned_cols=141 Identities=14% Similarity=0.136 Sum_probs=96.7
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
..+.+++.-+ .-|=+|..+|.|.+|+++..... ...-.|.. .|..++-.+ +.. ....-..+..|+.||.
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~-~~~~~h~~------~v~~v~~~p-~~~-~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR-QTFTGHES------DINAICFFP-NGN-AFATGSDDATCRLFDL 255 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE-EEECCCSS------CEEEEEECT-TSS-EEEEEETTSCEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeE-EEEcCCcC------CEEEEEEcC-CCC-EEEEEcCCCcEEEEEC
Confidence 3466766665 66889999999999999865432 12223433 355565433 233 3334455668999999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeeccccccee
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVT 170 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~ 170 (219)
.+++....+.. + ...+.|++++... ..|..|..-|.|-+-|..+..++..+..|.+.|.
T Consensus 256 ~~~~~~~~~~~---------------~----~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~ 316 (340)
T 1got_B 256 RADQELMTYSH---------------D----NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 316 (340)
T ss_dssp TTTEEEEEECC---------------T----TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCcEEEEEcc---------------C----CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEE
Confidence 98876544321 1 2334688888754 7899999999999999999999999999999999
Q ss_pred EEeeec-C-eEEEec
Q psy10905 171 AILPLG-G-DIVTIG 183 (219)
Q Consensus 171 ~Ii~l~-g-~l~TiG 183 (219)
++.--+ | .|+|.|
T Consensus 317 ~~~~s~dg~~l~s~s 331 (340)
T 1got_B 317 CLGVTDDGMAVATGS 331 (340)
T ss_dssp EEEECTTSSCEEEEE
T ss_pred EEEEcCCCCEEEEEc
Confidence 876443 3 255544
No 23
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.42 E-value=0.019 Score=45.18 Aligned_cols=148 Identities=9% Similarity=0.006 Sum_probs=96.5
Q ss_pred Cceeeeeeeec----ceeeecccCCcEEEEEccCCce-------Eeeeee-eccCCccccceeEEEeecCCC-CceEEEE
Q psy10905 14 SSVLHAITAVP----GELWCGESDGNISIYTMSEHSV-------TSHDTV-NHFHPVISNVDVSFLVSSPST-SAWVWSY 80 (219)
Q Consensus 14 ~~~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~v-------s~~~~l-~h~~~~~~~~~V~~L~~~~~~-~~~Vwsy 80 (219)
...+.+++.-+ ..|-+|..+|.|.||+++.... .....+ .|. ..|..++-.+.. .. ....
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~-~l~~ 129 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSK------GSLYSVKFAPAHLGL-KLAC 129 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCS------SCEEEEEECCGGGCS-EEEE
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccC------CceeEEEEcCCCCCc-EEEE
Confidence 44477887764 6789999999999999986532 112222 232 246666543321 33 3334
Q ss_pred EeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-----cceEEEecceeEEEEEecCc
Q psy10905 81 VYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-----DTCLYIGTTWGCIVVAEKDS 155 (219)
Q Consensus 81 v~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-----~~~LYIGTtwG~iiVaea~t 155 (219)
...+..|+.||..+++....+....-.. .+.+. .......|++++.. ++.|.+|+.-|.+++-....
T Consensus 130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~ 201 (351)
T 3f3f_A 130 LGNDGILRLYDALEPSDLRSWTLTSEMK------VLSIP--PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD 201 (351)
T ss_dssp EETTCEEEEEECSSTTCTTCCEEEEEEE------SCSCC--CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTT
T ss_pred ecCCCcEEEecCCChHHhcccccccccc------ccccc--cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCC
Confidence 4556789999999998877766543111 11111 12455667788774 68999999999998776444
Q ss_pred --ceeeeeecccccceeEEeeec
Q psy10905 156 --LRPITVFRPYEELVTAILPLG 176 (219)
Q Consensus 156 --LrPit~frp~e~~V~~Ii~l~ 176 (219)
++++..+..|.+.|+++.--+
T Consensus 202 ~~~~~~~~~~~h~~~i~~~~~~p 224 (351)
T 3f3f_A 202 GKLHVAAKLPGHKSLIRSISWAP 224 (351)
T ss_dssp SCEEEEEECCCCCSCEEEEEECC
T ss_pred CceeeeeecCCCCcceeEEEECC
Confidence 456888899999998887543
No 24
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.017 Score=46.75 Aligned_cols=136 Identities=15% Similarity=0.041 Sum_probs=90.3
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeee-eccCCccccceeEEEeecCC-CCceEEEEEeCCcEEEEE
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTV-NHFHPVISNVDVSFLVSSPS-TSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l-~h~~~~~~~~~V~~L~~~~~-~~~~Vwsyv~pg~~Vyqw 90 (219)
..|.+++.-+ ..|-+|..+|.|.||++..+.......+ .|.. .|..+.-.+. +...+.+. .-+-.|+.|
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~~~l~s~-~~dg~v~iw 84 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG------PVWRVDWAHPKFGTILASC-SYDGKVLIW 84 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS------CEEEEEECCGGGCSEEEEE-ETTSCEEEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCC------cEEEEEeCCCCCCCEEEEe-ccCCEEEEE
Confidence 4477777765 6788998999999999986554443333 2433 4666653222 13334443 445678999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEecCcc--eeeeeecc
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAEKDSL--RPITVFRP 164 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVaea~tL--rPit~frp 164 (219)
|.++++....... ......|++++.. +..|+.|..-|.|.+-+..+. .+...+..
T Consensus 85 d~~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 85 KEENGRWSQIAVH-------------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp EEETTEEEEEEEE-------------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC
T ss_pred EcCCCceeEeeee-------------------cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC
Confidence 9998763221111 1234568888887 458999999999999997665 44556778
Q ss_pred cccceeEEeeec
Q psy10905 165 YEELVTAILPLG 176 (219)
Q Consensus 165 ~e~~V~~Ii~l~ 176 (219)
+.+.|+++.--+
T Consensus 146 ~~~~v~~~~~~~ 157 (379)
T 3jrp_A 146 HAIGVNSASWAP 157 (379)
T ss_dssp CTTCEEEEEECC
T ss_pred CCCceEEEEEcC
Confidence 889999887554
No 25
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.38 E-value=0.029 Score=45.57 Aligned_cols=158 Identities=12% Similarity=0.101 Sum_probs=98.9
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCc-eEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHS-VTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~-vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
...+.+++.-+ ..|-+|..+|.|.+|+++... ......+.... ...+..+.-.+ +.. .......+-.|+.|
T Consensus 96 ~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~----~~~i~~~~~~~-~~~-~l~~~~~dg~i~~~ 169 (372)
T 1k8k_C 96 NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI----RSTVLSLDWHP-NSV-LLAAGSCDFKCRIF 169 (372)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC----CSCEEEEEECT-TSS-EEEEEETTSCEEEE
T ss_pred CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc----CCCeeEEEEcC-CCC-EEEEEcCCCCEEEE
Confidence 33466776665 789999999999999998654 22222221111 22466665433 333 33334456688999
Q ss_pred ecccceeeeeeecccc---ccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeeccc
Q psy10905 91 DTQARSIVNKLDCSKL---VPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPY 165 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl---~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~ 165 (219)
|..++++..+.+-... .|-.+.++. +......|++++... ..|+.|..-|.|-+-|..+.+++..++.+
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 170 SAYIKEVEERPAPTPWGSKMPFGELMFE------SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp ECCCTTTSCCCCCBTTBSCCCTTCEEEE------CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred EcccccccccccccccccccchhhheEe------cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 9876554333221110 011111111 223455788888854 68999999999999999999999999999
Q ss_pred ccceeEEeee-cCeEEEec
Q psy10905 166 EELVTAILPL-GGDIVTIG 183 (219)
Q Consensus 166 e~~V~~Ii~l-~g~l~TiG 183 (219)
.+.|..+.-- +|.++..|
T Consensus 244 ~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 244 TLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp SCCEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEecCCCEEEEE
Confidence 9999988655 35444444
No 26
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.013 Score=47.96 Aligned_cols=130 Identities=10% Similarity=0.028 Sum_probs=91.7
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
..+.+++.-+ ..|.+|..+|.|.+|+++........ -.|. ..+..++-.+ +. .......+..|+.||.
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~------~~i~~~~~~~-~~--~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCF-YGHS------QSIVSASWVG-DD--KVISCSMDGSVRLWSL 317 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEE-CCCS------SCEEEEEEET-TT--EEEEEETTSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEe-cCCC------ccEEEEEECC-CC--EEEEEeCCCcEEEEEC
Confidence 4467777765 77999999999999988864322111 1232 2456665433 22 4444556678999999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcce-------------
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLR------------- 157 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLr------------- 157 (219)
.+++....+.. ....|++++.. +..|++|..-|.|.+-+..+.+
T Consensus 318 ~~~~~~~~~~~---------------------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 376 (425)
T 1r5m_A 318 KQNTLLALSIV---------------------DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGI 376 (425)
T ss_dssp TTTEEEEEEEC---------------------TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------------
T ss_pred CCCcEeEeccc---------------------CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccc
Confidence 99887776642 12356777775 4789999999999999988888
Q ss_pred -------eeeeeccccc--ceeEEeee
Q psy10905 158 -------PITVFRPYEE--LVTAILPL 175 (219)
Q Consensus 158 -------Pit~frp~e~--~V~~Ii~l 175 (219)
++..++.+.+ .|..+.--
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~~~~~s 403 (425)
T 1r5m_A 377 LNPLPIPLYASYQSSQDNDYIFDLSWN 403 (425)
T ss_dssp --CEECCEEEEECCTTCCCCEEEEEEC
T ss_pred cCcccchhhhhhcCcccCCceEEEEcc
Confidence 8999999977 88887644
No 27
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.31 E-value=0.013 Score=49.77 Aligned_cols=122 Identities=12% Similarity=0.071 Sum_probs=91.3
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
..+-+|..+|.|.+|++..+.........|.. .|..++-.+ +...+.+.-. +..|+.||.++++...++.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~------~v~~v~~s~-~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~-- 173 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDEST------YVASVKWSH-DGSFLSVGLG-NGLVDIYDVESQTKLRTMA-- 173 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTC------CEEEEEECT-TSSEEEEEET-TSCEEEEETTTCCEEEEEC--
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCC------CEEEEEECC-CCCEEEEECC-CCeEEEEECcCCeEEEEec--
Confidence 66888889999999999987766544444433 366665444 4444444443 4589999999987766542
Q ss_pred ccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecC-cceeeeeecccccceeEEeee
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKD-SLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~-tLrPit~frp~e~~V~~Ii~l 175 (219)
.....|++++..++.|+.|..-|.|.+-+.. .-.++..+..|.+.|+++.--
T Consensus 174 -------------------~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 174 -------------------GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp -------------------CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred -------------------CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence 2345688888889999999999999999977 567888999999999988754
No 28
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.31 E-value=0.017 Score=46.48 Aligned_cols=147 Identities=5% Similarity=-0.027 Sum_probs=98.5
Q ss_pred CCceeeeeeeec------ceeeecccCCcEEEEEccCCc-eEeeeeeeccCCccccceeEEEeecCCCC--ceEEEEEeC
Q psy10905 13 ASSVLHAITAVP------GELWCGESDGNISIYTMSEHS-VTSHDTVNHFHPVISNVDVSFLVSSPSTS--AWVWSYVYP 83 (219)
Q Consensus 13 ~~~~i~s~a~v~------~eLW~G~~~g~Isi~~l~~~~-vs~~~~l~h~~~~~~~~~V~~L~~~~~~~--~~Vwsyv~p 83 (219)
-...|.++++-+ ..+.++..+|.|.||++..+. +........+ ..+..|..++-.+... ......-.-
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA---DADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECS---CTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecccc---CCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 345588888873 459999999999999998543 3332222211 1123456654333211 123333445
Q ss_pred CcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee---cceEEEecceeEEEEEecCcceeee
Q psy10905 84 GCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL---DTCLYIGTTWGCIVVAEKDSLRPIT 160 (219)
Q Consensus 84 g~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~---~~~LYIGTtwG~iiVaea~tLrPit 160 (219)
+..|+.||.++++....+. .....|++++.. +..|+.|..-|.|.+-+..+-+++.
T Consensus 94 dg~i~v~d~~~~~~~~~~~---------------------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYV---------------------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVA 152 (366)
T ss_dssp TCEEEEECTTTCCEEEEEE---------------------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEEchhceEeeeec---------------------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEE
Confidence 5689999999988766552 123467888875 3789999999999999999999999
Q ss_pred ee---cccccceeEEeeec-C-eEEEec
Q psy10905 161 VF---RPYEELVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 161 ~f---rp~e~~V~~Ii~l~-g-~l~TiG 183 (219)
.+ .+|.+.|+++.--+ | .|++.|
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEE
T ss_pred EecccccccCceeEEEECCCCCEEEEec
Confidence 98 78999999887543 3 355554
No 29
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.31 E-value=0.014 Score=46.95 Aligned_cols=139 Identities=12% Similarity=0.150 Sum_probs=94.8
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCc--eEeeeeeeccCCccccceeEEEeecCCCCc-eEEEEEeCCcEEEE
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHS--VTSHDTVNHFHPVISNVDVSFLVSSPSTSA-WVWSYVYPGCSVYQ 89 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~--vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~-~Vwsyv~pg~~Vyq 89 (219)
..|.+++.-+ ..|.+|..+|.|.||++.... ........|..+ |..++-.+ +.. .+.+.- .+..|+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~------v~~~~~~~-~~~~~l~~~~-~dg~i~~ 83 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHP------LLCCNFID-NTDLQIYVGT-VQGEILK 83 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSC------EEEEEEEE-SSSEEEEEEE-TTSCEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCc------eEEEEECC-CCCcEEEEEc-CCCeEEE
Confidence 3478888776 779999999999999998665 112233355433 55554333 344 455544 3457999
Q ss_pred Eec-ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecCc---------cee
Q psy10905 90 WDT-QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKDS---------LRP 158 (219)
Q Consensus 90 w~~-~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~t---------LrP 158 (219)
||. ++++.. + +.. ......|++|+.. ++.|+.|..-|.|.+-+..+ .+|
T Consensus 84 wd~~~~~~~~-~-----------------~~~--~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (342)
T 1yfq_A 84 VDLIGSPSFQ-A-----------------LTN--NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN 143 (342)
T ss_dssp ECSSSSSSEE-E-----------------CBS--CCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred EEeccCCceE-e-----------------ccc--cCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCe
Confidence 999 887641 1 111 0034568888887 79999999999999999888 888
Q ss_pred eeeecccccceeEEeeecCeEEEe
Q psy10905 159 ITVFRPYEELVTAILPLGGDIVTI 182 (219)
Q Consensus 159 it~frp~e~~V~~Ii~l~g~l~Ti 182 (219)
+..+. +.+.|+++..-+..+++.
T Consensus 144 ~~~~~-~~~~v~~~~~~~~~l~~~ 166 (342)
T 1yfq_A 144 SNNTK-VKNKIFTMDTNSSRLIVG 166 (342)
T ss_dssp SSSSS-SCCCEEEEEECSSEEEEE
T ss_pred eeEEe-eCCceEEEEecCCcEEEE
Confidence 88887 889999877654334433
No 30
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.28 E-value=0.0091 Score=48.86 Aligned_cols=140 Identities=17% Similarity=0.163 Sum_probs=94.7
Q ss_pred Cceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeee-ee-----ccCCccccceeEEEeecCCCCceEEEEEeCC
Q psy10905 14 SSVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDT-VN-----HFHPVISNVDVSFLVSSPSTSAWVWSYVYPG 84 (219)
Q Consensus 14 ~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~-l~-----h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg 84 (219)
...|.++++-+ ..|-+|..+|.|.||++.......... .. ...+...+..|..++-.+.+...+.+ ...+
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~~d 121 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS-SSFD 121 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE-EETT
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE-EeCC
Confidence 34578888765 779999999999999998653331111 00 00001123457777654433333444 4456
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-----cceEEEecceeEEEEEecCcceee
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-----DTCLYIGTTWGCIVVAEKDSLRPI 159 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-----~~~LYIGTtwG~iiVaea~tLrPi 159 (219)
..|+.||..+++....++... .+.+++.. +..+++|+.-|.|.+-+..+-+++
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEE----------------------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSS----------------------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred CeEEEeeCCCCccceeccCCC----------------------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 689999999998887765322 12233332 247999999999999999999999
Q ss_pred eeecccccceeEEeeec
Q psy10905 160 TVFRPYEELVTAILPLG 176 (219)
Q Consensus 160 t~frp~e~~V~~Ii~l~ 176 (219)
..++.|.+.|++|.--+
T Consensus 180 ~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 180 HILQGHRQEILAVSWSP 196 (408)
T ss_dssp EEECCCCSCEEEEEECS
T ss_pred eeecCCCCcEEEEEECC
Confidence 99999999999987554
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.25 E-value=0.046 Score=45.06 Aligned_cols=149 Identities=12% Similarity=0.090 Sum_probs=98.0
Q ss_pred ceeeeeeee----c--ce-eeecccCCcEEEEEccC------C-ceEe--eeeee----ccCCccccceeEEEeecCCCC
Q psy10905 15 SVLHAITAV----P--GE-LWCGESDGNISIYTMSE------H-SVTS--HDTVN----HFHPVISNVDVSFLVSSPSTS 74 (219)
Q Consensus 15 ~~i~s~a~v----~--~e-LW~G~~~g~Isi~~l~~------~-~vs~--~~~l~----h~~~~~~~~~V~~L~~~~~~~ 74 (219)
..+.+++.- + .. |-+|..+|.|.+|+++. . .+.. ...+. .++ ..+..+..++-.+ +.
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~-~~ 198 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM--TPSQFATSVDISE-RG 198 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSS--SSCCCCCEEEECT-TS
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecccc--CCCCCceEEEECC-Cc
Confidence 457888888 5 55 99999999999999987 3 2220 00110 000 0122355554333 22
Q ss_pred ceEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecce---eEEE
Q psy10905 75 AWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTW---GCIV 149 (219)
Q Consensus 75 ~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtw---G~ii 149 (219)
.......+..|+.||..+++...++... ..| ......|++++.. +..|+.|..- |.|.
T Consensus 199 --~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------~~h-~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 199 --LIATGFNNGTVQISELSTLRPLYNFESQ--------------HSM-INNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp --EEEEECTTSEEEEEETTTTEEEEEEECC--------------C----CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred --eEEEEeCCCcEEEEECCCCceeEEEecc--------------ccc-cccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 3344455678999999999888777641 011 0124567788774 4788999988 9999
Q ss_pred EEecCcceeeeeecc-------------cccceeEEeeec-C-eEEEec
Q psy10905 150 VAEKDSLRPITVFRP-------------YEELVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 150 Vaea~tLrPit~frp-------------~e~~V~~Ii~l~-g-~l~TiG 183 (219)
+-|..+.+++..+.. |.+.|.++.--+ | .|++.+
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 999999999999998 999999887553 3 344444
No 32
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.24 E-value=0.063 Score=45.79 Aligned_cols=144 Identities=12% Similarity=0.062 Sum_probs=92.6
Q ss_pred Cceeeeeeeec----ceeeecccCCcEEEEEccCCceEeeeeeec--------cCC-c-------cccceeEEEeecCCC
Q psy10905 14 SSVLHAITAVP----GELWCGESDGNISIYTMSEHSVTSHDTVNH--------FHP-V-------ISNVDVSFLVSSPST 73 (219)
Q Consensus 14 ~~~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h--------~~~-~-------~~~~~V~~L~~~~~~ 73 (219)
...+.++++.+ ..|-+|..+|.|.+|+++...........+ ++. + -....+..+. .+
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~ 279 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS---GH 279 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE---EE
T ss_pred CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc---CC
Confidence 34477787774 679999999999999998654221110000 000 0 0012233332 23
Q ss_pred CceEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEE
Q psy10905 74 SAWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVA 151 (219)
Q Consensus 74 ~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVa 151 (219)
...+.+. ..+..|+.||..+++...++. .....|++++... .+|+.|..-|.|-+-
T Consensus 280 ~~~l~~~-~~d~~i~vwd~~~~~~~~~~~---------------------~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 280 GNIVVSG-SYDNTLIVWDVAQMKCLYILS---------------------GHTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp TTEEEEE-ETTSCEEEEETTTTEEEEEEC---------------------CCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCEEEEE-eCCCeEEEEECCCCcEEEEec---------------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 3334333 345579999999988766552 1234577777764 689999999999999
Q ss_pred ecCcceeeeeecccccceeEEeeecCeEEEe
Q psy10905 152 EKDSLRPITVFRPYEELVTAILPLGGDIVTI 182 (219)
Q Consensus 152 ea~tLrPit~frp~e~~V~~Ii~l~g~l~Ti 182 (219)
|..+-+++..++.|.+.|+++..-+..|++.
T Consensus 338 d~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~ 368 (464)
T 3v7d_B 338 DLENGELMYTLQGHTALVGLLRLSDKFLVSA 368 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSEEEEE
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCEEEEE
Confidence 9999999999999999999877543233333
No 33
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.20 E-value=0.061 Score=45.15 Aligned_cols=127 Identities=12% Similarity=0.201 Sum_probs=86.0
Q ss_pred ceeeeeeeec--ceeeecc--------cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCC
Q psy10905 15 SVLHAITAVP--GELWCGE--------SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG 84 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~--------~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg 84 (219)
..+.++++-+ ..||++. .+|.|.+|++++..+... +.|.. .+..++-.+ +...+|..-..+
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~--~~~~~------~~~~~~~~~-~g~~l~~~~~~~ 324 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT--IGPPG------NKRHIVSGN-TENKIYVSDMCC 324 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE--EEEEE------CEEEEEECS-STTEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee--ccCCC------CcceEEECC-CCCEEEEEecCC
Confidence 3355666554 6899887 478999999987654432 33332 244454333 444677777888
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecce---------------eE
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTW---------------GC 147 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtw---------------G~ 147 (219)
..|+.||.+++++...++.. ..+.+++.. +..||++... |.
T Consensus 325 ~~v~v~d~~~~~~~~~~~~~----------------------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 325 SKIEVYDLKEKKVQKSIPVF----------------------DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp TEEEEEETTTTEEEEEEECS----------------------SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred CEEEEEECCCCcEEEEecCC----------------------CCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 89999999999887766421 124466665 3578888763 79
Q ss_pred EEEEecCcceeeeeecccccceeEEe
Q psy10905 148 IVVAEKDSLRPITVFRPYEELVTAIL 173 (219)
Q Consensus 148 iiVaea~tLrPit~frp~e~~V~~Ii 173 (219)
|.+.|..+.+++..+.. ...+..+.
T Consensus 383 v~~~d~~~~~~~~~~~~-~~~~~~~~ 407 (433)
T 3bws_A 383 VYVIDTTTDTVKEFWEA-GNQPTGLD 407 (433)
T ss_dssp EEEEETTTTEEEEEEEC-SSSEEEEE
T ss_pred EEEEECCCCcEEEEecC-CCCCceEE
Confidence 99999999999888876 44555543
No 34
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.029 Score=47.52 Aligned_cols=152 Identities=14% Similarity=0.173 Sum_probs=101.2
Q ss_pred EEEee--CCCceeeeeeeec---ceeeecccCCcEEEEEccC---Cc-eEeeeeeeccCCccccceeEEEeecCCCCceE
Q psy10905 7 VLTEL--GASSVLHAITAVP---GELWCGESDGNISIYTMSE---HS-VTSHDTVNHFHPVISNVDVSFLVSSPSTSAWV 77 (219)
Q Consensus 7 ~ltel--g~~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~---~~-vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~V 77 (219)
.+.+| |-...|.++++-+ ..|-+|..||.|.||++.. +. ........|.. .|..++-.+ +...+
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~------~v~~~~~~~-~~~~l 126 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSS------TVTQITMIP-NFDAF 126 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSS------CEEEEEECT-TSSEE
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCC------CEEEEEEeC-CCCEE
Confidence 45566 2235588888877 5799999999999999875 32 22223334533 466776433 33334
Q ss_pred EEEEeCCcEEEEEecc---cceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEE
Q psy10905 78 WSYVYPGCSVYQWDTQ---ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVV 150 (219)
Q Consensus 78 wsyv~pg~~Vyqw~~~---tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiV 150 (219)
.+ ...+..|+.||.+ +++....+... .++.+.... ......++++... +..|+.|+.-|.|.+
T Consensus 127 ~s-~s~dg~i~vwd~~~~~~~~~~~~~~~~-------~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 196 (437)
T 3gre_A 127 AV-SSKDGQIIVLKVNHYQQESEVKFLNCE-------CIRKINLKN--FGKNEYAVRMRAFVNEEKSLLVALTNLSRVII 196 (437)
T ss_dssp EE-EETTSEEEEEEEEEEEETTEEEEEEEE-------EEEEEEGGG--GSSCCCEEEEEEEECSSCEEEEEEETTSEEEE
T ss_pred EE-EeCCCEEEEEEeccccCCceeeccccc-------eeEEEEccC--cccccCceEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 43 4456679999995 55554433322 233333322 1155667777755 689999999999999
Q ss_pred EecCcceeeeeecc--cccceeEEeee
Q psy10905 151 AEKDSLRPITVFRP--YEELVTAILPL 175 (219)
Q Consensus 151 aea~tLrPit~frp--~e~~V~~Ii~l 175 (219)
-|..+.+++..++. |.+.|+++.--
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s 223 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICID 223 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEEC
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEEC
Confidence 99999999999987 89999988743
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.19 E-value=0.021 Score=46.31 Aligned_cols=142 Identities=11% Similarity=0.064 Sum_probs=93.5
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeee-eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..|.++++-+ .-|-+|..+|.|.||++..+.+.....+ .|.. .|..++-.+ +...+.+. ..+..|+.||
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~------~v~~~~~~~-~~~~l~~~-~~dg~i~vwd 80 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG------QVTGVDWAP-DSNRIVTC-GTDRNAYVWT 80 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS------CEEEEEEET-TTTEEEEE-ETTSCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC------cccEEEEeC-CCCEEEEE-cCCCeEEEEE
Confidence 3467777776 7789998999999999998764433333 3433 466665433 34444443 3456799999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCccee----eeeeccc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRP----ITVFRPY 165 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrP----it~frp~ 165 (219)
.++++....+... .....|++++.. +..|++|..-|.|.+-+..+-.+ .....+|
T Consensus 81 ~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 141 (372)
T 1k8k_C 81 LKGRTWKPTLVIL-------------------RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI 141 (372)
T ss_dssp EETTEEEEEEECC-------------------CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC
T ss_pred CCCCeeeeeEEee-------------------cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc
Confidence 9988755443322 123457777775 46899999999999877555442 3444788
Q ss_pred ccceeEEeeec-C-eEEEec
Q psy10905 166 EELVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 166 e~~V~~Ii~l~-g-~l~TiG 183 (219)
.+.|.++.--+ | .+++.+
T Consensus 142 ~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 142 RSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp CSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEc
Confidence 89999887553 3 255544
No 36
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.16 E-value=0.052 Score=46.51 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=91.1
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceE---eeeeeeccCCccccceeEEEeecCCCCceEEEEE-eCCcEEEEE
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVT---SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYV-YPGCSVYQW 90 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs---~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv-~pg~~Vyqw 90 (219)
++.++.-+ ..|-+|..+|.|.||++..+... ......| ...|..++-.+.+...+.+.. ..+-.|+.|
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~------~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH------QGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC------SSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred eeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeeccc------CCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 44444444 78999999999999998854322 1112222 223555554333333333322 234579999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEec--ceeEEEEEecCcceeeeeecccc
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT--TWGCIVVAEKDSLRPITVFRPYE 166 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT--twG~iiVaea~tLrPit~frp~e 166 (219)
|..+++....++.. .+|+++... +++|..|+ .-|.|.|-+..+++++..|+.|+
T Consensus 307 d~~t~~~~~~~~~~----------------------~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 307 NVCSGACLSAVDAH----------------------SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp ETTTTEEEEEEECS----------------------SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred eCCccccceeeccc----------------------cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence 99999988776532 245555543 36777765 56899999999999999999999
Q ss_pred cceeEEeee-cC-eEEEec
Q psy10905 167 ELVTAILPL-GG-DIVTIG 183 (219)
Q Consensus 167 ~~V~~Ii~l-~g-~l~TiG 183 (219)
+.|.++.-- +| .|+|.|
T Consensus 365 ~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp SCEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEe
Confidence 999997643 34 377765
No 37
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.15 E-value=0.017 Score=46.55 Aligned_cols=125 Identities=10% Similarity=0.058 Sum_probs=87.2
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCC--CCceEEEEEeCCcEEEEEecccceeeeeee
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPS--TSAWVWSYVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~--~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
..|-+|..+|.|.+|+++....... ..|.. .+..+.-.+. +...+.+. ..+..|+.||..+++...++.
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~------~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNMALRWE--TNIKN------GVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEE--EECSS------CEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEE
T ss_pred CEEEEEccCCeEEEEECccCceeee--cCCCC------ceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCccccee
Confidence 7889999999999999997765322 34433 3666654432 34445544 456689999999887666554
Q ss_pred ccccccCCCCcccccccccccccCceeeeEeeecc---eEEEecceeEEEEEecC-------------------cceeee
Q psy10905 103 CSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDT---CLYIGTTWGCIVVAEKD-------------------SLRPIT 160 (219)
Q Consensus 103 ~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~---~LYIGTtwG~iiVaea~-------------------tLrPit 160 (219)
... . ......|++++...+ .|+.|..-|.|-+-+.. +++++.
T Consensus 252 ~~~------------~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (357)
T 3i2n_A 252 SVS------------E----KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQ 315 (357)
T ss_dssp EEE------------E----ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEE
T ss_pred eec------------c----CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceee
Confidence 432 1 124557888888763 58888889999998865 446788
Q ss_pred eecccccceeEEee
Q psy10905 161 VFRPYEELVTAILP 174 (219)
Q Consensus 161 ~frp~e~~V~~Ii~ 174 (219)
.+..|.+.|.++.-
T Consensus 316 ~~~~~~~~v~~~~~ 329 (357)
T 3i2n_A 316 NVTLSTQPISSLDW 329 (357)
T ss_dssp EEECCSSCEEEEEE
T ss_pred ccccCCCCeeEEEE
Confidence 88899988888653
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.14 E-value=0.056 Score=45.04 Aligned_cols=154 Identities=12% Similarity=0.134 Sum_probs=98.1
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
+-...+.+++.-+ ..|.+|..+|.|.||+++...... ..-.|.. .|..++-.+ +...+.+ ...+-.|+.
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-~~~~h~~------~v~~~~~~~-~~~~l~s-~~~d~~v~i 207 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR-TLIGHRA------TVTDIAIID-RGRNVLS-ASLDGTIRL 207 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE-EEECCSS------CEEEEEEET-TTTEEEE-EETTSCEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce-EEcCCCC------cEEEEEEcC-CCCEEEE-EcCCCcEEE
Confidence 3445578888776 789999999999999998654321 1123433 366665433 3333443 344567999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccc-----cccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeee
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEE-----PLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee-----~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~f 162 (219)
||..+++....+...+ .....+.++..-. -.......|++++.. +..|+.|+.-|.|.+-|..+-+++..+
T Consensus 208 wd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKE--NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL 285 (420)
T ss_dssp EETTTTEEEEEECBTT--BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred eECCCCceeEEeecCC--CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc
Confidence 9999999998887543 1222222222110 001123455666654 368999999999999998888766555
Q ss_pred -cccccceeEEeeec
Q psy10905 163 -RPYEELVTAILPLG 176 (219)
Q Consensus 163 -rp~e~~V~~Ii~l~ 176 (219)
.+|.+.|.++.--+
T Consensus 286 ~~~~~~~v~~~~~~~ 300 (420)
T 3vl1_A 286 PSKFTCSCNSLTVDG 300 (420)
T ss_dssp CCTTSSCEEEEEECS
T ss_pred ccccCCCceeEEEeC
Confidence 55888898887543
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.046 Score=44.19 Aligned_cols=137 Identities=10% Similarity=0.009 Sum_probs=90.9
Q ss_pred Cceeeeeeee----cceeeecccCCcEEEEEccCCceEeeeeee-ccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 14 SSVLHAITAV----PGELWCGESDGNISIYTMSEHSVTSHDTVN-HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 14 ~~~i~s~a~v----~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~-h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
...+.+++.. ...|-+|..+|.|.||+++.+.......+. |.. .|..++-.+............+..|+
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA------SVNSVQWAPHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS------CEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc------ceEEEEeCCCCCCCEEEEecCCCcEE
Confidence 3447788876 378999999999999999987654333332 432 46666544332123445556677899
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee---------------cceEEEecceeEEEEEec
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL---------------DTCLYIGTTWGCIVVAEK 153 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~---------------~~~LYIGTtwG~iiVaea 153 (219)
.||..+.+....+- ++ .....|++++.. +..|..|..-|.|.+-|.
T Consensus 129 v~d~~~~~~~~~~~---------------~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 129 VVEFKENGTTSPII---------------ID----AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 189 (379)
T ss_dssp EEECCTTSCCCEEE---------------EE----CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEE
T ss_pred EEecCCCCceeeEE---------------ec----CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEe
Confidence 99998864332221 11 223446666664 478999999999999875
Q ss_pred Cc----ceeeeeecccccceeEEeee
Q psy10905 154 DS----LRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 154 ~t----LrPit~frp~e~~V~~Ii~l 175 (219)
.+ ..++..++.|.+.|+++.--
T Consensus 190 ~~~~~~~~~~~~~~~h~~~v~~~~~s 215 (379)
T 3jrp_A 190 NSDAQTYVLESTLEGHSDWVRDVAWS 215 (379)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred cCCCcceeeEEEEecccCcEeEEEEC
Confidence 44 35777888999999988644
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.07 E-value=0.037 Score=43.42 Aligned_cols=131 Identities=11% Similarity=0.110 Sum_probs=82.5
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCc--eEeeeee-eccCCccccceeEEEeecCC-CCceEEEEEeCCcEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHS--VTSHDTV-NHFHPVISNVDVSFLVSSPS-TSAWVWSYVYPGCSV 87 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~--vs~~~~l-~h~~~~~~~~~V~~L~~~~~-~~~~Vwsyv~pg~~V 87 (219)
...|.+++.-+ ..|-+|..+|.|.||+++.+. ......+ .|.. .|..+.-.+. +...+.+ ...+..|
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~d~~~l~s-~~~dg~v 83 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS------SIVAIDWASPEYGRIIAS-ASYDKTV 83 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS------CEEEEEECCGGGCSEEEE-EETTSCE
T ss_pred ccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC------cEEEEEEcCCCCCCEEEE-EcCCCeE
Confidence 34478888766 779999999999999998542 2233333 2433 4666654333 2333444 4456679
Q ss_pred EEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEecCcceeeeeec
Q psy10905 88 YQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVaea~tLrPit~fr 163 (219)
+.||.++++.... .+..+.+. .+......|++++.. +..|+.|+.-|.|.+-|..+.+++..+.
T Consensus 84 ~vwd~~~~~~~~~---------~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 84 KLWEEDPDQEECS---------GRRWNKLC---TLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp EEEEECTTSCTTS---------SCSEEEEE---EECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred EEEecCCCccccc---------ccCcceee---eecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccc
Confidence 9999988754210 00111111 012345678888887 4589999999999999987777665554
No 41
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.05 E-value=0.065 Score=44.77 Aligned_cols=156 Identities=12% Similarity=0.140 Sum_probs=101.6
Q ss_pred CCCceeeeeeeec------ceeeecccCCcEEEEEccCCceEeeeee-eccCCccccceeEEEeecCCCCceEEEEEeCC
Q psy10905 12 GASSVLHAITAVP------GELWCGESDGNISIYTMSEHSVTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG 84 (219)
Q Consensus 12 g~~~~i~s~a~v~------~eLW~G~~~g~Isi~~l~~~~vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg 84 (219)
|-...|.+++.-+ ..|=+|..||.|.||+++++.......+ .|.. .|..+...+ +.. ....-..+
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~------~v~~~~~~~-~~~-~l~s~s~D 101 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL------GVVSVDISH-TLP-IAASSSLD 101 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS------CEEEEEECS-SSS-EEEEEETT
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC------CEEEEEECC-CCC-EEEEEeCC
Confidence 4445577887754 3588999999999999987766544333 2432 355554322 222 33334556
Q ss_pred cEEEEEecccceeeeeeeccc-------cccCCCCccc---------ccccc-----cccccCceeeeEeeec--ceEEE
Q psy10905 85 CSVYQWDTQARSIVNKLDCSK-------LVPCSESLQS---------ICIEE-----PLRQDQCHVTSVCILD--TCLYI 141 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~sk-------l~PcSEsl~s---------i~iee-----~l~~~~~qVtaL~~~~--~~LYI 141 (219)
..|+.||.++++....++..+ +.|..+.|-+ .+++. .+......|++++... .+|..
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 789999999998887776432 2232222211 11111 1122344688888754 68999
Q ss_pred ecceeEEEEEecCcceeeeeecccccceeEEeee
Q psy10905 142 GTTWGCIVVAEKDSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 142 GTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l 175 (219)
|..-|.|.+-|..+-+++..++.|...|+++.--
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 215 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC
T ss_pred EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc
Confidence 9999999999999999999999999999987643
No 42
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.05 E-value=0.064 Score=44.55 Aligned_cols=136 Identities=11% Similarity=-0.010 Sum_probs=92.5
Q ss_pred Cceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeee-eeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 14 SSVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDT-VNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 14 ~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~-l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
...+.+++.-+ .-|-+|..+|.|.||++.......... ..|.. .|..+.-.+.+.. .......+..|+.
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~-~l~s~~~d~~i~i 145 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGD------AITGMKFNQFNTN-QLFVSSIRGATTL 145 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTC------BEEEEEEETTEEE-EEEEEETTTEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCC------ceeEEEeCCCCCC-EEEEEeCCCEEEE
Confidence 45578888777 469999999999999999665443222 23433 3666653332223 3334455678999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
||.+++++.. +. .| ......|++++.. +..|+.|..-|.|.+-|. +-+|+..++.|.+
T Consensus 146 wd~~~~~~~~-~~-----------------~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 146 RDFSGSVIQV-FA-----------------KT-DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA 205 (383)
T ss_dssp EETTSCEEEE-EE-----------------CC-CCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS
T ss_pred EECCCCceEE-Ee-----------------cc-CCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC
Confidence 9998644321 11 10 1233567777776 478999999999999997 6789999999999
Q ss_pred ceeEEeeec
Q psy10905 168 LVTAILPLG 176 (219)
Q Consensus 168 ~V~~Ii~l~ 176 (219)
.|+++.--+
T Consensus 206 ~v~~~~~~~ 214 (383)
T 3ei3_B 206 KVTHAEFNP 214 (383)
T ss_dssp CEEEEEECS
T ss_pred cEEEEEECC
Confidence 999987544
No 43
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.03 E-value=0.059 Score=42.67 Aligned_cols=142 Identities=11% Similarity=0.107 Sum_probs=86.2
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEE-eCCcEEEEEecc
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYV-YPGCSVYQWDTQ 93 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv-~pg~~Vyqw~~~ 93 (219)
+.+++.-. ..|.+|..+|.|.||+++.+.........+.. ....|..++..+.+...+..+. .....|..||..
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ---HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC---CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecc---cCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 44444444 78999999999999999854322111111111 1223455544333344344332 234578999988
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEee--ecceEEEec--ceeEEEEEecCcceeeeeecccccce
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--LDTCLYIGT--TWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~~~~LYIGT--twG~iiVaea~tLrPit~frp~e~~V 169 (219)
+.+....... ...|.+++. .++++++++ .-|.|.+-|..+.+++..|+.|++.|
T Consensus 230 ~~~~~~~~~~----------------------~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V 287 (318)
T 4ggc_A 230 SGACLSAVDA----------------------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 287 (318)
T ss_dssp TCCEEEEEEC----------------------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred cccccccccc----------------------eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 8776544322 122334443 336777655 56899999999999999999999999
Q ss_pred eEEeeec-C-eEEEec
Q psy10905 170 TAILPLG-G-DIVTIG 183 (219)
Q Consensus 170 ~~Ii~l~-g-~l~TiG 183 (219)
+++.--+ | .|+|.|
T Consensus 288 ~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 288 LSLTMSPDGATVASAA 303 (318)
T ss_dssp EEEEECTTSSCEEEEE
T ss_pred EEEEEcCCCCEEEEEe
Confidence 9976432 4 355543
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.02 E-value=0.021 Score=47.28 Aligned_cols=148 Identities=11% Similarity=0.040 Sum_probs=97.0
Q ss_pred ceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCC--cEEEE
Q psy10905 15 SVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG--CSVYQ 89 (219)
Q Consensus 15 ~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg--~~Vyq 89 (219)
..+.+++.-+ ..|-+|..+|.|.||+++.......... |......+..+..++-.+.....+.+.-.-| ..|+.
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSY-TSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECC-CCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEec-cccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 3466777765 5788999999999999987654322221 1100001345777765443333444444433 28999
Q ss_pred Eecccce-eeeeeeccccccCCCCcccccccccccccCceeeeEeee---cceEEEecceeEEEEEecCcceeeeeeccc
Q psy10905 90 WDTQARS-IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL---DTCLYIGTTWGCIVVAEKDSLRPITVFRPY 165 (219)
Q Consensus 90 w~~~tr~-I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~---~~~LYIGTtwG~iiVaea~tLrPit~frp~ 165 (219)
||..+.+ ....+. ......|++++.. +..|+.|..-|.|.+-+..+.+++..++.|
T Consensus 245 ~d~~~~~~~~~~~~--------------------~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 245 WDLRNANTPLQTLN--------------------QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp EETTSTTSCSBCCC--------------------SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred EeCCCCCCCcEEee--------------------cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 9998752 221111 0234568888884 478899999999999999999999999999
Q ss_pred ccceeEEeeec-C--eEEEec
Q psy10905 166 EELVTAILPLG-G--DIVTIG 183 (219)
Q Consensus 166 e~~V~~Ii~l~-g--~l~TiG 183 (219)
.+.|.++.--+ | .|++.+
T Consensus 305 ~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 305 GNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp SSCCCCEEECTTCTTEEEECC
T ss_pred CCceEEEEECCCCCCEEEEEe
Confidence 99998876543 3 355554
No 45
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.01 E-value=0.079 Score=45.18 Aligned_cols=153 Identities=16% Similarity=0.221 Sum_probs=90.4
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.+++.-+ ..|-+|..+|.|.+|+++.+.... .+.|.+ .+..++..+.+.. ....-..+..|+.||
T Consensus 165 ~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~--~~~~~~------~v~~~~~~~~~~~-~l~~~s~d~~v~iwd 235 (393)
T 1erj_A 165 EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL--TLSIED------GVTTVAVSPGDGK-YIAAGSLDRAVRVWD 235 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--EEECSS------CEEEEEECSTTCC-EEEEEETTSCEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE--EEEcCC------CcEEEEEECCCCC-EEEEEcCCCcEEEEE
Confidence 33467777765 778899999999999998765432 223322 2444443332333 333344566789999
Q ss_pred cccceeeeeeeccc--------------cccCCCCccc---------ccccc-----------------cccccCceeee
Q psy10905 92 TQARSIVNKLDCSK--------------LVPCSESLQS---------ICIEE-----------------PLRQDQCHVTS 131 (219)
Q Consensus 92 ~~tr~I~~~LD~sk--------------l~PcSEsl~s---------i~iee-----------------~l~~~~~qVta 131 (219)
.++++...+++... +.|....|-+ -+++. .+..-...|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 315 (393)
T 1erj_A 236 SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 315 (393)
T ss_dssp TTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEE
T ss_pred CCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEE
Confidence 99888877764211 1222221211 11111 00111234666
Q ss_pred Eeeec--ceEEEecceeEEEEEecCcceeeeeecccccceeEEeee
Q psy10905 132 VCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 132 L~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l 175 (219)
++... .+|..|..-|.|.+-|..+-+|+..++.|.+.|.++...
T Consensus 316 ~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 316 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEec
Confidence 66653 466777777888888888888888888888888776544
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.98 E-value=0.1 Score=42.11 Aligned_cols=134 Identities=13% Similarity=0.104 Sum_probs=94.1
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
|-...|.++++-+ ..|=+|..+|.|.||++.++.+... .-.|.. .|..++-.+ +.. .......+..|+.
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~-~~~h~~------~v~~~~~~~-~~~-~l~s~~~d~~i~v 91 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKL------GISDVAWSS-DSN-LLVSASDDKTLKI 91 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE-ECCCSS------CEEEEEECT-TSS-EEEEEETTSEEEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchh-hccCCC------ceEEEEEcC-CCC-EEEEECCCCEEEE
Confidence 3345577887776 6688899999999999886654321 122322 366665433 233 3344456678999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
||.++++...++.- ....|++++.. ++.|+.|..-|.|.+-|..+.+++..+..|.+
T Consensus 92 wd~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 150 (312)
T 4ery_A 92 WDVSSGKCLKTLKG---------------------HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 150 (312)
T ss_dssp EETTTCCEEEEEEC---------------------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EECCCCcEEEEEcC---------------------CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence 99999876655431 23346666664 37889999999999999999999999999999
Q ss_pred ceeEEeee
Q psy10905 168 LVTAILPL 175 (219)
Q Consensus 168 ~V~~Ii~l 175 (219)
.|.++.--
T Consensus 151 ~v~~~~~~ 158 (312)
T 4ery_A 151 PVSAVHFN 158 (312)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEc
Confidence 99887643
No 47
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.96 E-value=0.14 Score=43.23 Aligned_cols=131 Identities=15% Similarity=0.097 Sum_probs=88.5
Q ss_pred eeeeeeeec----ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 16 VLHAITAVP----GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 16 ~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
.+.++++-+ ..|.+|..+|.|.+|+++...... ..-.|.. .|..++-.+ +.. ....-.-+..|+.||
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~-~~~~h~~------~v~~v~~~p-~~~-~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ-AFETHES------DVNSVRYYP-SGD-AFASGSDDATCRLYD 268 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE-EECCCSS------CEEEEEECT-TSS-EEEEEETTSCEEEEE
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE-EecCCCC------CeEEEEEeC-CCC-EEEEEeCCCeEEEEE
Confidence 355555543 579999999999999998765321 1123433 355555433 223 333344567899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
..+.+....+.-. .....|++++.. +..|..|..-|.|-+-|..+-.++..+..|++.|
T Consensus 269 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v 329 (354)
T 2pbi_B 269 LRADREVAIYSKE-------------------SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV 329 (354)
T ss_dssp TTTTEEEEEECCT-------------------TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE
T ss_pred CCCCcEEEEEcCC-------------------CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE
Confidence 9887654433211 122346666664 5789999999999999999999999999999999
Q ss_pred eEEee
Q psy10905 170 TAILP 174 (219)
Q Consensus 170 ~~Ii~ 174 (219)
.++.-
T Consensus 330 ~~l~~ 334 (354)
T 2pbi_B 330 STLRV 334 (354)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88753
No 48
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.92 E-value=0.14 Score=42.80 Aligned_cols=138 Identities=20% Similarity=0.240 Sum_probs=93.9
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
+.+++.-+ ..|-+|..+|.|.||+++...... ..-.|.. +|..++-.+ +...+ ..-..+..|+.||.++
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~-~~~~h~~------~v~~l~~sp-d~~~l-~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH-TLEGHAM------PIRSLTFSP-DSQLL-VTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCCSS------CCCEEEECT-TSCEE-EEECTTSCEEEEETTT
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE-EEcccCC------ceeEEEEcC-CCCEE-EEEcCCCeEEEEECCC
Confidence 55666555 778999999999999998764431 1112322 344554333 23323 3334566799999998
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccccceeEE
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAI 172 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~I 172 (219)
++...++. .-...|++++.. +.+|..|..-|.|-+-|..+-+++..|..|.+.|.++
T Consensus 238 ~~~~~~~~---------------------~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v 296 (321)
T 3ow8_A 238 ANLAGTLS---------------------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 296 (321)
T ss_dssp CCEEEEEC---------------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred cceeEEEc---------------------CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEE
Confidence 87665431 123457888875 4678889999999999999999999999999999887
Q ss_pred eeec-C-eEEEecc
Q psy10905 173 LPLG-G-DIVTIGR 184 (219)
Q Consensus 173 i~l~-g-~l~TiG~ 184 (219)
.--+ | .|++.|.
T Consensus 297 ~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 297 KYNGNGSKIVSVGD 310 (321)
T ss_dssp EECTTSSEEEEEET
T ss_pred EECCCCCEEEEEeC
Confidence 5433 3 3666553
No 49
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.91 E-value=0.049 Score=49.85 Aligned_cols=134 Identities=13% Similarity=0.179 Sum_probs=91.2
Q ss_pred Cceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCC-CCceEEEEEeCCcEEEE
Q psy10905 14 SSVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPS-TSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 14 ~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~-~~~~Vwsyv~pg~~Vyq 89 (219)
...+.+++.-+ ..|-+|..+|.|.+|+++...........|.. .+..+.-.+. +...+.+ ...+..|+.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~l~~-~~~dg~i~~ 212 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER------GVNYVDYYPLPDKPYMIT-ASDDLTIKI 212 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTT------CCCEEEECCSTTCCEEEE-ECTTSEEEE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCC------CEEEEEEEECCCCCEEEE-EeCCCEEEE
Confidence 34467777664 67889999999999999865433222222211 2333432221 2333333 334558999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
||..+++....+.- ....|++++... ..|..|..-|.|.+-+..+.+++..++.+.+
T Consensus 213 ~d~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 271 (814)
T 3mkq_A 213 WDYQTKSCVATLEG---------------------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE 271 (814)
T ss_dssp EETTTTEEEEEEEC---------------------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSS
T ss_pred EECCCCcEEEEEcC---------------------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC
Confidence 99999887666531 223577777764 5789999999999999999999999999999
Q ss_pred ceeEEeee
Q psy10905 168 LVTAILPL 175 (219)
Q Consensus 168 ~V~~Ii~l 175 (219)
.|.++.--
T Consensus 272 ~v~~~~~~ 279 (814)
T 3mkq_A 272 RSWCIATH 279 (814)
T ss_dssp SEEEEEEC
T ss_pred cEEEEEEc
Confidence 99888743
No 50
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.88 E-value=0.048 Score=46.32 Aligned_cols=145 Identities=12% Similarity=0.066 Sum_probs=90.5
Q ss_pred eeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 17 LHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 17 i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
+.++++-. .-|=+|..||.|.+|+++...-.....-.|..+ |..++-.+ +...+ ..-..+-.|+.||..
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~------v~~v~~~p-~~~~l-~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD------INSVKFFP-DGQRF-GTGSDDGTCRLFDMR 279 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC------CCEEEECT-TSSEE-EEECSSSCEEEEETT
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCC------eEEEEEec-CCCeE-EEEcCCCeEEEEECC
Confidence 45555433 567889999999999998432222222234333 44444322 22223 333455679999999
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeee----ccccc
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVF----RPYEE 167 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~f----rp~e~ 167 (219)
+++.+..+....- . .....+.|++++.. +..|+.|..-|.|.+-|..+-+.+..+ .+|++
T Consensus 280 ~~~~~~~~~~~~~---~-----------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 345 (380)
T 3iz6_a 280 TGHQLQVYNREPD---R-----------NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG 345 (380)
T ss_dssp TTEEEEEECCCCS---S-----------SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC
T ss_pred CCcEEEEeccccc---c-----------cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC
Confidence 9988776654320 0 01233457888774 589999999999999998766655544 68888
Q ss_pred ceeEEeee-cC-eEEEec
Q psy10905 168 LVTAILPL-GG-DIVTIG 183 (219)
Q Consensus 168 ~V~~Ii~l-~g-~l~TiG 183 (219)
.|.++.-- +| .|+|.|
T Consensus 346 ~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 346 RISCLGLSSDGSALCTGS 363 (380)
T ss_dssp CCCEEEECSSSSEEEEEC
T ss_pred ceEEEEECCCCCEEEEee
Confidence 88876532 24 355544
No 51
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.88 E-value=0.059 Score=43.27 Aligned_cols=141 Identities=12% Similarity=0.079 Sum_probs=88.7
Q ss_pred eeCCCceeeeeeeec-----ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeec-----CCCCceEEE
Q psy10905 10 ELGASSVLHAITAVP-----GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSS-----PSTSAWVWS 79 (219)
Q Consensus 10 elg~~~~i~s~a~v~-----~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~-----~~~~~~Vws 79 (219)
+++....+.+++.-+ ..|.+|..+|.|.+|++..........-.|.++ |..+.-. ..+...+.+
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~s~~~~~l~~ 134 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEI------INAIDGIGGLGIGEGAPEIVT 134 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSC------EEEEEEESGGGCC-CCCEEEE
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccc------eEEEeeccccccCCCccEEEE
Confidence 444455567777765 568999999999999998654112222234333 4444210 112333433
Q ss_pred EEeCCcEEEEEecccce-eeeeeeccccccCCCCcccccccccccccCceeeeEe------eecceEEEecceeEEEEEe
Q psy10905 80 YVYPGCSVYQWDTQARS-IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVC------ILDTCLYIGTTWGCIVVAE 152 (219)
Q Consensus 80 yv~pg~~Vyqw~~~tr~-I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~------~~~~~LYIGTtwG~iiVae 152 (219)
...+..|+.||..+++ ....+.. |-......|.+++ -.+..|+.|..-|.|.+-+
T Consensus 135 -~~~d~~i~vwd~~~~~~~~~~~~~-----------------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 196 (357)
T 3i2n_A 135 -GSRDGTVKVWDPRQKDDPVANMEP-----------------VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFD 196 (357)
T ss_dssp -EETTSCEEEECTTSCSSCSEEECC-----------------CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEE
T ss_pred -EeCCCeEEEEeCCCCCCcceeccc-----------------cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEE
Confidence 3445679999998876 3333322 1122344666766 3568899999999999999
Q ss_pred cCcceeeeeecccccceeEEeee
Q psy10905 153 KDSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 153 a~tLrPit~frp~e~~V~~Ii~l 175 (219)
..+.+++. ...+.+.|.++.--
T Consensus 197 ~~~~~~~~-~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 197 LRNMALRW-ETNIKNGVCSLEFD 218 (357)
T ss_dssp TTTTEEEE-EEECSSCEEEEEES
T ss_pred CccCceee-ecCCCCceEEEEcC
Confidence 98888744 47788889888755
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.79 E-value=0.14 Score=46.88 Aligned_cols=143 Identities=11% Similarity=0.058 Sum_probs=96.8
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.+++.-+ ..|-+|..+|.|.||+++.+.......-.|.. .|+.++-.+.+.. .......+..|+.||
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~------~v~~~~~~p~~~~-~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH------FVMCVAFNPKDPS-TFASGCLDRTVKVWS 169 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS------CEEEEEEETTEEE-EEEEEETTSEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC------cEEEEEEEcCCCC-EEEEEeCCCeEEEEE
Confidence 34467777766 56889999999999999875333333334433 3666654332333 344445566899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEee----ecceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI----LDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~----~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
..+++...++... ....|++++. .+..|++|+.-|.|.+-+..+-+++..++.|.+
T Consensus 170 ~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 229 (814)
T 3mkq_A 170 LGQSTPNFTLTTG--------------------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (814)
T ss_dssp TTCSSCSEEEECC--------------------CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCCCcceeEEecC--------------------CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 9877654444321 2234556665 457899999999999999999999999999999
Q ss_pred ceeEEeeec-C-eEEEec
Q psy10905 168 LVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 168 ~V~~Ii~l~-g-~l~TiG 183 (219)
.|+++.--+ | .|++.|
T Consensus 230 ~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 230 NVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp CEEEEEECSSSSEEEEEE
T ss_pred CEEEEEEcCCCCEEEEEe
Confidence 999887543 3 244444
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.79 E-value=0.037 Score=47.81 Aligned_cols=133 Identities=11% Similarity=0.084 Sum_probs=87.9
Q ss_pred eeeeeeeec---ceeeecccCCcEEEEEccCCc-eEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 16 VLHAITAVP---GELWCGESDGNISIYTMSEHS-VTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 16 ~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~-vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
.|.|++.=+ .-|=+|..+|.|.||++.... .......-|..+ |+.|+-.|.+...+.+. .-+..|..||
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~------V~~l~f~p~~~~~l~s~-s~D~~v~iwd 193 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGS------ITGLKFNPLNTNQFYAS-SMEGTTRLQD 193 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCC------CCEEEECSSCTTEEEEE-CSSSCEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCC------EEEEEEeCCCCCEEEEE-eCCCEEEEee
Confidence 377887754 457789999999999987553 333334445443 56665444444444443 3445689999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
.+++.+...... ......|++++.. +..|..|..-|.|.+-+... +++..++.|.+.|
T Consensus 194 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v 253 (435)
T 4e54_B 194 FKGNILRVFASS-------------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKV 253 (435)
T ss_dssp TTSCEEEEEECC-------------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCE
T ss_pred ccCCceeEEecc-------------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceE
Confidence 987655322111 1233445666664 36888999999999999654 7788899999999
Q ss_pred eEEeee
Q psy10905 170 TAILPL 175 (219)
Q Consensus 170 ~~Ii~l 175 (219)
.+|.--
T Consensus 254 ~~v~~~ 259 (435)
T 4e54_B 254 THVALN 259 (435)
T ss_dssp EEEEEC
T ss_pred Eeeeec
Confidence 987643
No 54
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.78 E-value=0.11 Score=42.84 Aligned_cols=148 Identities=14% Similarity=0.081 Sum_probs=95.4
Q ss_pred eeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeee--ccCCccccceeEEEeecCCCCceEEEEEeCC--cEEEEEe
Q psy10905 17 LHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVN--HFHPVISNVDVSFLVSSPSTSAWVWSYVYPG--CSVYQWD 91 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~--h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg--~~Vyqw~ 91 (219)
+.+++.-+ ..|-+|..+|.|.+|+++........... |.. .+..+..++-.+ +...+.+.-.-+ ..|+.||
T Consensus 189 i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~---~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 189 ATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMIN---NSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---C---CCCCEEEEEECS-STTEEEEEEEETTEEEEEEEE
T ss_pred ceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccc---cCCccceEEECC-CCCEEEEEecCCCCceEEEEE
Confidence 56666654 37888999999999999875433221110 311 123466666444 344444443332 6899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeec------
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFR------ 163 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~fr------ 163 (219)
..+++...++.... .|.... +.. .+....|++++.. +..|+.|..-|.|.+-|..+.+++..+.
T Consensus 265 ~~~~~~~~~~~~~~-~~~~~~-----~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 336 (397)
T 1sq9_A 265 TEFGERIGSLSVPT-HSSQAS-----LGE--FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 336 (397)
T ss_dssp TTTCCEEEEECBC--------------CC--BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred CCCCcccceeccCc-cccccc-----ccc--cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcc
Confidence 99998887765421 010000 110 1245678888886 5789999999999999999999999999
Q ss_pred cc---------------ccceeEEeeec
Q psy10905 164 PY---------------EELVTAILPLG 176 (219)
Q Consensus 164 p~---------------e~~V~~Ii~l~ 176 (219)
.| .+.|..+.-.+
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 337 EIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp SSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred cchhhhhccccccccccCCceeEEEecc
Confidence 88 77787776543
No 55
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.77 E-value=0.17 Score=41.47 Aligned_cols=134 Identities=13% Similarity=0.137 Sum_probs=87.4
Q ss_pred ceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 15 SVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 15 ~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..+.++++-+ ..|=+|..||.|.||+++...........|.. .+..+.-.+.........-..+..|+.||
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER------GVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTT------CEEEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcC------cEEEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 3466777654 56889999999999999754322221112211 12223221211212223334566899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
.++++....+. .| ...|++++... ..|.-|..=|.|-+=+..+.+++..+..+.+.|
T Consensus 215 ~~~~~~~~~~~-----------------~h----~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~ 273 (304)
T 2ynn_A 215 YQTKSCVATLE-----------------GH----MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERS 273 (304)
T ss_dssp TTTTEEEEEEE-----------------CC----SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSE
T ss_pred CCCCccceeeC-----------------CC----CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccE
Confidence 99988766553 22 23477777755 457788888999999999999999999999999
Q ss_pred eEEeee
Q psy10905 170 TAILPL 175 (219)
Q Consensus 170 ~~Ii~l 175 (219)
.++.-.
T Consensus 274 ~~~~~~ 279 (304)
T 2ynn_A 274 WCIATH 279 (304)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 887644
No 56
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.76 E-value=0.15 Score=40.75 Aligned_cols=131 Identities=14% Similarity=0.145 Sum_probs=89.2
Q ss_pred ceeeeeeeec-----ceeeecccCCcEEEEEccCCceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 15 SVLHAITAVP-----GELWCGESDGNISIYTMSEHSVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 15 ~~i~s~a~v~-----~eLW~G~~~g~Isi~~l~~~~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
..|.+++.-+ ..|.+|..+|.|.||+++..... ....-.|.. .|..++-.+ +...+.+. ..+-.|+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~------~v~~~~~~~-~~~~l~s~-~~dg~v~ 111 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG------PVLDVCWSD-DGSKVFTA-SCDKTAK 111 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSS------CEEEEEECT-TSSEEEEE-ETTSEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccC------CEEEEEECc-CCCEEEEE-cCCCcEE
Confidence 4477887776 46999999999999999863333 233334533 366665433 44444444 4566899
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEee--e--cceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--L--DTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~--~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
.||.++++..... .....|++++. . +..|+.|..-|.|.+-|..+-+++..+..
T Consensus 112 iwd~~~~~~~~~~----------------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 169 (368)
T 3mmy_A 112 MWDLSSNQAIQIA----------------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL 169 (368)
T ss_dssp EEETTTTEEEEEE----------------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC
T ss_pred EEEcCCCCceeec----------------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec
Confidence 9999998866422 12345777776 3 25689999999999999999999988887
Q ss_pred cccceeEEeeec
Q psy10905 165 YEELVTAILPLG 176 (219)
Q Consensus 165 ~e~~V~~Ii~l~ 176 (219)
++ .+.++.+..
T Consensus 170 ~~-~~~~~~~~~ 180 (368)
T 3mmy_A 170 PE-RCYCADVIY 180 (368)
T ss_dssp SS-CEEEEEEET
T ss_pred CC-CceEEEecC
Confidence 65 444444443
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.74 E-value=0.22 Score=42.21 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=92.7
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.+++.-+ ..|-+|..+|.|.||++......... -.|.. .|..+.- +.. .......+..|+.||
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~------~v~~~~~---~~~-~l~~~~~dg~i~i~d 202 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM-AGHQA------RVGCLSW---NRH-VLSSGSRSGAIHHHD 202 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSS------CEEEEEE---ETT-EEEEEETTSEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe-cCCCC------ceEEEEE---CCC-EEEEEcCCCCEEEEe
Confidence 44477777766 78999999999999999865433211 13322 3555652 223 444556677899999
Q ss_pred cccc-eeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccccc
Q psy10905 92 TQAR-SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEEL 168 (219)
Q Consensus 92 ~~tr-~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~ 168 (219)
..+. +....+ . .....|++++.. +.+|..|+.-|.|.+-|..+.+|+..+.++.+.
T Consensus 203 ~~~~~~~~~~~-----------------~----~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 261 (401)
T 4aez_A 203 VRIANHQIGTL-----------------Q----GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA 261 (401)
T ss_dssp TTSSSCEEEEE-----------------E----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC
T ss_pred cccCcceeeEE-----------------c----CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce
Confidence 9843 222221 1 234568888885 468999999999999999999999999999999
Q ss_pred eeEEeeec
Q psy10905 169 VTAILPLG 176 (219)
Q Consensus 169 V~~Ii~l~ 176 (219)
|+++.--+
T Consensus 262 v~~~~~~p 269 (401)
T 4aez_A 262 VKAVAWCP 269 (401)
T ss_dssp CCEEEECT
T ss_pred EEEEEECC
Confidence 99987665
No 58
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.044 Score=45.33 Aligned_cols=153 Identities=9% Similarity=0.069 Sum_probs=95.5
Q ss_pred CCceeeeeeeec--ceeeecccCCcEEEEEccCC--ce-EeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEE
Q psy10905 13 ASSVLHAITAVP--GELWCGESDGNISIYTMSEH--SV-TSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSV 87 (219)
Q Consensus 13 ~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~--~v-s~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~V 87 (219)
....+.+++.-+ ..|-+|..+|.|.||++... .. .......|.. .|..+.-.+.+...+.+ ...+..|
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~~l~s-~~~dg~v 138 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSS------SVKTVKFNAKQDNVLAS-GGNNGEI 138 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSS------CCCEEEECSSSTTBEEE-ECSSSCE
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCcc------ceEEEEEcCCCCCEEEE-EcCCCeE
Confidence 344467777655 77899989999999998862 11 1222223433 35555543322333433 3445679
Q ss_pred EEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 88 YQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
+.||..+++-... ...+ ..+. .+......|++++... ..|+.|..-|.|.+-|..+.+++..+..
T Consensus 139 ~iwd~~~~~~~~~----~~~~-------~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 206 (416)
T 2pm9_A 139 FIWDMNKCTESPS----NYTP-------LTPG-QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSY 206 (416)
T ss_dssp EBCBTTTTSSCTT----TCCC-------BCCC-CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECC
T ss_pred EEEECCCCccccc----cccc-------cccc-cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEec
Confidence 9999988761100 0000 0000 0123455788888874 5789999999999999999999999988
Q ss_pred c------ccceeEEeeec-C--eEEEecc
Q psy10905 165 Y------EELVTAILPLG-G--DIVTIGR 184 (219)
Q Consensus 165 ~------e~~V~~Ii~l~-g--~l~TiG~ 184 (219)
+ .+.|+++.--+ | .+++.+.
T Consensus 207 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 207 TSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp CCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred cccccccCCceEEEEECCCCCCEEEEEEC
Confidence 7 78888877554 3 3555544
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.15 Score=40.04 Aligned_cols=139 Identities=12% Similarity=0.016 Sum_probs=93.3
Q ss_pred EeeCC-Cceeeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcE
Q psy10905 9 TELGA-SSVLHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCS 86 (219)
Q Consensus 9 telg~-~~~i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~ 86 (219)
.+|.. ...|.+++.-+ ..|-+|..+|.|.||++++..... ..-.|.. .|..++-.+ +...+.+.- .+..
T Consensus 12 ~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~~~~~------~v~~~~~~~-~~~~l~~~~-~dg~ 82 (313)
T 3odt_A 12 ATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGT-VVYTGQG------FLNSVCYDS-EKELLLFGG-KDTM 82 (313)
T ss_dssp EEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEE-EEEECSS------CEEEEEEET-TTTEEEEEE-TTSC
T ss_pred HHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEE-EeecCCc------cEEEEEECC-CCCEEEEec-CCCe
Confidence 44433 44588888833 779999999999999997654332 2223422 355565433 334444443 4556
Q ss_pred EEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccc
Q psy10905 87 VYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYE 166 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e 166 (219)
|+.|+..+.+-. +.++. +......|++++..++.|+.|..-|.|.+-+ +-+++..++.+.
T Consensus 83 i~~~~~~~~~~~------------~~~~~------~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~ 142 (313)
T 3odt_A 83 INGVPLFATSGE------------DPLYT------LIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHN 142 (313)
T ss_dssp EEEEETTCCTTS------------CC-CE------ECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCS
T ss_pred EEEEEeeecCCC------------Ccccc------hhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCC
Confidence 788887653211 00111 1234567889999999999999999999999 778899999999
Q ss_pred cceeEEeeec
Q psy10905 167 ELVTAILPLG 176 (219)
Q Consensus 167 ~~V~~Ii~l~ 176 (219)
+.|..+.-.+
T Consensus 143 ~~v~~~~~~~ 152 (313)
T 3odt_A 143 ASVWDAKVVS 152 (313)
T ss_dssp SCEEEEEEEE
T ss_pred CceeEEEEcc
Confidence 9999887664
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.66 E-value=0.2 Score=42.24 Aligned_cols=81 Identities=12% Similarity=0.126 Sum_probs=60.7
Q ss_pred eCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEecCcce
Q psy10905 82 YPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAEKDSLR 157 (219)
Q Consensus 82 ~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVaea~tLr 157 (219)
.-+..|+.||.++++.+..+. . -...|+++++. ++.|+.|..-|.|.+-|..+-+
T Consensus 173 s~D~~v~lwd~~~~~~~~~~~-----------------~----h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 173 SGDGTCALWDVESGQLLQSFH-----------------G----HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-----------------C----CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred eCCCcEEEEeCCCCeEEEEEc-----------------C----CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 345678999999988766552 1 12346677663 3689999999999999999999
Q ss_pred eeeeecccccceeEEeeec-C-eEEEec
Q psy10905 158 PITVFRPYEELVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 158 Pit~frp~e~~V~~Ii~l~-g-~l~TiG 183 (219)
++..|..|++.|.++.--+ | .|+|.|
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s 259 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGS 259 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEe
Confidence 9999999999999887543 3 244444
No 61
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.66 E-value=0.21 Score=40.89 Aligned_cols=143 Identities=11% Similarity=0.064 Sum_probs=93.9
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.++++-+ ..|=+|..||.|.+|+++++.......-.|.. .|..++-.+.+.. ....-..+..|+.||
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~------~v~~v~~~p~~~~-~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH------FVMCVAFNPKDPS-TFASGCLDRTVKVWS 169 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS------CEEEEEECTTCTT-EEEEEETTSEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC------cEEEEEECCCCCC-EEEEEeCCCeEEEEE
Confidence 34467777666 67889999999999999865333333333433 3666654443333 344445566899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
..+.+...++.. .....|.++... +..|..|..-|.|-+-|..+-+++..+..|.+
T Consensus 170 ~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~ 229 (304)
T 2ynn_A 170 LGQSTPNFTLTT--------------------GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (304)
T ss_dssp TTCSSCSEEEEC--------------------CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCCCCccceecc--------------------CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC
Confidence 876654333221 112234555543 25788899999999999999999999999999
Q ss_pred ceeEEeeec-C-eEEEec
Q psy10905 168 LVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 168 ~V~~Ii~l~-g-~l~TiG 183 (219)
.|.++.--+ + .|+|.|
T Consensus 230 ~v~~~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 230 NVSFAVFHPTLPIIISGS 247 (304)
T ss_dssp CEEEEEECSSSSEEEEEE
T ss_pred CEEEEEECCCCCEEEEEc
Confidence 999876443 2 255544
No 62
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.65 E-value=0.27 Score=42.29 Aligned_cols=155 Identities=10% Similarity=0.113 Sum_probs=92.9
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
.+.++++-+ ..|-+|..+|.|.+|+++.+... ...-.|.+. |..+.-.+ +.. .......+..|+.||..
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~-~~~~~h~~~------v~~~~~~~-~g~-~l~s~s~D~~v~vwd~~ 264 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV-KTFTGHREW------VRMVRPNQ-DGT-LIASCSNDQTVRVWVVA 264 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSC------EEEEEECT-TSS-EEEEEETTSCEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-EEEeCCCcc------EEEEEECC-CCC-EEEEEcCCCeEEEEECC
Confidence 366777665 67899999999999999865432 122234332 44443222 233 33344556789999999
Q ss_pred cceeeeeeeccccccCCCCccccccccc-----cc-ccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEP-----LR-QDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~-----l~-~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
+++....+..- ...+.+++.... +. +.........-.+..|..|..-|.|-+-|..+-+++..+..|.+
T Consensus 265 ~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 339 (410)
T 1vyh_C 265 TKECKAELREH-----RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 (410)
T ss_dssp TCCEEEEECCC-----SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCceeeEecCC-----CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC
Confidence 98877665321 111112211100 00 00000011111256799999999999999999999999999999
Q ss_pred ceeEEeeec-C-eEEEecc
Q psy10905 168 LVTAILPLG-G-DIVTIGR 184 (219)
Q Consensus 168 ~V~~Ii~l~-g-~l~TiG~ 184 (219)
.|+++.--+ | .|+|.|.
T Consensus 340 ~v~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCAD 358 (410)
T ss_dssp CEEEEEECSSSSCEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeC
Confidence 999886443 3 3666554
No 63
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.59 E-value=0.24 Score=40.86 Aligned_cols=125 Identities=12% Similarity=0.191 Sum_probs=84.2
Q ss_pred eeeeeeeec--ceee-ecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 16 VLHAITAVP--GELW-CGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 16 ~i~s~a~v~--~eLW-~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
.+.++++-+ ..|+ ++..+|.|.+|+++....... +.+... +..++-.+ +...+|..-..+..|+.||.
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~--~~~~~~------~~~~~~~~-dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT--VSVGRS------PKGIAVTP-DGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE--EECCSS------EEEEEECT-TSSEEEEEETTTTEEEEEET
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE--EecCCC------cceEEECC-CCCEEEEEeCCCCEEEEEEC
Confidence 345666554 5675 777799999999987655432 222122 34444333 45568877777889999999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEec---ceeEEEEEecCcceeeeeeccccc
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT---TWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT---twG~iiVaea~tLrPit~frp~e~ 167 (219)
.+++....+... ..+.+++.. +.+||++. .-|.|.+.|..+.+++..+..+.+
T Consensus 188 ~~~~~~~~~~~~----------------------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 245 (391)
T 1l0q_A 188 VTNSVIDTVKVE----------------------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD 245 (391)
T ss_dssp TTTEEEEEEECS----------------------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS
T ss_pred CCCeEEEEEecC----------------------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC
Confidence 999877665421 134556554 46899998 579999999999999888876543
Q ss_pred ceeEE
Q psy10905 168 LVTAI 172 (219)
Q Consensus 168 ~V~~I 172 (219)
+..+
T Consensus 246 -~~~~ 249 (391)
T 1l0q_A 246 -PAGI 249 (391)
T ss_dssp -EEEE
T ss_pred -ccEE
Confidence 4443
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.59 E-value=0.25 Score=41.05 Aligned_cols=144 Identities=13% Similarity=0.163 Sum_probs=92.6
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEee---------------------c
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVS---------------------S 70 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~---------------------~ 70 (219)
...+.+++.-+ ..|-+|..+|.|.+|+++.......... |..+ ...+..++. .
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR-KENP---HDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB-TTBT---TCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec-CCCC---CCCccEEEEecCCcceeeecccCcccceEEc
Confidence 34467777765 7799999999999999987644322111 1111 111222211 1
Q ss_pred CCCCceEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecc---eEEEecceeE
Q psy10905 71 PSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDT---CLYIGTTWGC 147 (219)
Q Consensus 71 ~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~---~LYIGTtwG~ 147 (219)
+ +...+.+. ..+..|+.||..+++...++.. .....|++++...+ .|+.|..-|.
T Consensus 257 ~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 257 T-YGKYVIAG-HVSGVITVHNVFSKEQTIQLPS--------------------KFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp C-TTEEEEEE-ETTSCEEEEETTTCCEEEEECC--------------------TTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred C-CCCEEEEE-cCCCeEEEEECCCCceeEEccc--------------------ccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 1 23334443 3445699999998876555421 23457888888764 8999999999
Q ss_pred EEEEecCcc-eeeeeecc-cccceeEEeeecC-eEEEec
Q psy10905 148 IVVAEKDSL-RPITVFRP-YEELVTAILPLGG-DIVTIG 183 (219)
Q Consensus 148 iiVaea~tL-rPit~frp-~e~~V~~Ii~l~g-~l~TiG 183 (219)
|.+-|..+. +|+..+.. +...|..+..-+| .|+|.|
T Consensus 315 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~ 353 (420)
T 3vl1_A 315 LAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSG 353 (420)
T ss_dssp EEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEET
T ss_pred EEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEec
Confidence 999999887 67888887 6677777765565 355554
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.55 E-value=0.026 Score=48.39 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=63.9
Q ss_pred EEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcce
Q psy10905 80 YVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLR 157 (219)
Q Consensus 80 yv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLr 157 (219)
++--|..||.||.+|+++...++... ....|++|+... .+|.+|+.-|.|.+-+..+-+
T Consensus 120 Avgld~tV~lWd~~tg~~~~~~~~~~-------------------~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 120 AVALDNSVYLWSASSGDILQLLQMEQ-------------------PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCS-------------------TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCEEEEEECCCCCEEEEEEecC-------------------CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 45558999999999999887665432 345689998864 789999999999999999999
Q ss_pred eeeeecccccceeEEee
Q psy10905 158 PITVFRPYEELVTAILP 174 (219)
Q Consensus 158 Pit~frp~e~~V~~Ii~ 174 (219)
++..+..|...|.++-.
T Consensus 181 ~~~~~~~h~~~v~~~s~ 197 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSW 197 (420)
T ss_dssp EEEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCCceEEEee
Confidence 99999999999988754
No 66
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.53 E-value=0.28 Score=40.81 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=86.9
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCC--ceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEH--SVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~--~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
+.+++.-+ ..|=+|..+|.|.||+++.. .+. ....-.|... |..+.-. ....+ .....+..|+.||
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~------v~~~~~~--~~~~l-~s~s~d~~i~~wd 170 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY------LSCCRFL--DDNQI-VTSSGDTTCALWD 170 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSC------EEEEEEE--ETTEE-EEEETTSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCcc------EEEEEEC--CCCcE-EEEECCCcEEEEE
Confidence 45555544 66778889999999998854 222 2223334332 3333211 11122 2334466799999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
.++++....+. . -...|++++... ..|..|..-|.|-+-|..+-+++..|..|.+.|
T Consensus 171 ~~~~~~~~~~~-----------------~----h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v 229 (340)
T 1got_B 171 IETGQQTTTFT-----------------G----HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229 (340)
T ss_dssp TTTTEEEEEEC-----------------C----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE
T ss_pred CCCCcEEEEEc-----------------C----CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCE
Confidence 99988765542 1 233577888764 578888889999999999999999999999999
Q ss_pred eEEeeec
Q psy10905 170 TAILPLG 176 (219)
Q Consensus 170 ~~Ii~l~ 176 (219)
.++.--+
T Consensus 230 ~~v~~~p 236 (340)
T 1got_B 230 NAICFFP 236 (340)
T ss_dssp EEEEECT
T ss_pred EEEEEcC
Confidence 9887543
No 67
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.50 E-value=0.13 Score=41.01 Aligned_cols=117 Identities=21% Similarity=0.296 Sum_probs=73.6
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.++++-+ ..|-+|..||.|.+|+++..... ..+.+.+ .+..+.-.+ +.. +.+..-+..|+.||
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~--~~~~~~~------~v~~~~~~~-~~~--~~~~~~d~~i~iwd 283 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL--YTLDGGD------IINALCFSP-NRY--WLCAATGPSIKIWD 283 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE--EEEECSS------CEEEEEECS-SSS--EEEEEETTEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee--eeecCCc------eEEeeecCC-CCc--eeeccCCCEEEEEE
Confidence 34466776655 77889999999999999865432 2233332 244444322 222 23334567899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEec
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEK 153 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea 153 (219)
.++++...++.-..... ........|++|+... ..|+.|..=|.|-|=+.
T Consensus 284 ~~~~~~~~~~~~~~~~~------------~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 284 LEGKIIVDELKQEVIST------------SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp TTTTEEEEEECCC-------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCCeEEEeccccceee------------eccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 99999988876443111 1124566799998865 57888877788777553
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.47 E-value=0.061 Score=44.27 Aligned_cols=159 Identities=10% Similarity=0.032 Sum_probs=95.1
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCc-eEeeeeee--ccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHS-VTSHDTVN--HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~-vs~~~~l~--h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
...+.+++.-+ ..|-+|..+|.|.+|+++... ......+. |. ..|..++-.+ +...+.+ ...+..|+
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~------~~v~~~~~~~-~~~~l~~-~~~d~~i~ 171 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR------STILSLDWHP-NNVLLAA-GCADRKAY 171 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCC------SCEEEEEECT-TSSEEEE-EESSSCEE
T ss_pred CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccC------CCeEEEEEcC-CCCEEEE-EeCCCEEE
Confidence 34467777665 778999999999999988653 11222232 32 2466665433 3333433 34456799
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCccee----eeee
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRP----ITVF 162 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrP----it~f 162 (219)
.||.+++++..+..-.. -.+.+.+-..-..+ .....|++++... .+|+.|..-|.|-+-+..+-.+ +..+
T Consensus 172 iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASV---WGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV 247 (377)
T ss_dssp EEEECCSSCC-CCCSCS---SCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE
T ss_pred EEEEEecccCCCccccc---cccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee
Confidence 99998877655443221 11111111111112 3455688988854 6789999999999999877766 8889
Q ss_pred cccccceeEEeee-cCe-EEEecc
Q psy10905 163 RPYEELVTAILPL-GGD-IVTIGR 184 (219)
Q Consensus 163 rp~e~~V~~Ii~l-~g~-l~TiG~ 184 (219)
..|.+.|.++.-- +|. |++.++
T Consensus 248 ~~~~~~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 248 KLSQLPLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp ECSSSCEEEEEEEETTEEEEEESS
T ss_pred cCCCCceEEEEEcCCCCEEEEEcC
Confidence 9999999987654 353 444333
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.47 E-value=0.18 Score=41.15 Aligned_cols=153 Identities=14% Similarity=0.067 Sum_probs=92.4
Q ss_pred eeeeeeeec--c-eeeecccCCcEEEEEccCCceEeeeeeeccCC---------ccccceeEEEeecCCCCceEEEEEeC
Q psy10905 16 VLHAITAVP--G-ELWCGESDGNISIYTMSEHSVTSHDTVNHFHP---------VISNVDVSFLVSSPSTSAWVWSYVYP 83 (219)
Q Consensus 16 ~i~s~a~v~--~-eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~---------~~~~~~V~~L~~~~~~~~~Vwsyv~p 83 (219)
.+.+++.-+ . -|-+|..+|.|.+|+++...-.....-.|... ...+..|..++-.+ +...+.+. ..
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~~ 265 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTV-GT 265 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEE-ET
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEe-cC
Confidence 366777665 3 38899999999999998653221111001000 11244577776444 33444444 44
Q ss_pred CcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeec
Q psy10905 84 GCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 84 g~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~fr 163 (219)
+..|+.||..+++....+.-.. +... ..........-.+..+..+..-|.|-+-+..+-+++..+.
T Consensus 266 dg~i~vwd~~~~~~~~~~~~~~---~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 266 DNRMRLWNSSNGENTLVNYGKV---CNNS-----------KKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp TSCEEEEETTTCCBCCCCCCCC---CCCC-----------SSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred CCeEEEEECCCCccceeccccc---cccc-----------cccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 5579999999987643322111 1100 1111112222234677777888999999999999999999
Q ss_pred ccccceeEEeeec-C-eEEEecc
Q psy10905 164 PYEELVTAILPLG-G-DIVTIGR 184 (219)
Q Consensus 164 p~e~~V~~Ii~l~-g-~l~TiG~ 184 (219)
+|.+.|.++.--+ | .|+|.|.
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEET
T ss_pred cCCCeEEEEEEcCCCCEEEEECC
Confidence 9999999986554 3 3666653
No 70
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.39 Score=41.39 Aligned_cols=123 Identities=12% Similarity=0.065 Sum_probs=81.6
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEe---eeeeeccCCccccceeEEEeecCC-C-CceEEEEEeCCcE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTS---HDTVNHFHPVISNVDVSFLVSSPS-T-SAWVWSYVYPGCS 86 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~---~~~l~h~~~~~~~~~V~~L~~~~~-~-~~~Vwsyv~pg~~ 86 (219)
+..+.+++.-+ ..|-+|..+|.|.+|++.+..... .....|.. .|..++-.+. + ...+ ..-..+..
T Consensus 149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~------~v~~~~~sp~~~~~~~l-~s~~~d~~ 221 (450)
T 2vdu_B 149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVS------MLTDVHLIKDSDGHQFI-ITSDRDEH 221 (450)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSS------CEEEEEEEECTTSCEEE-EEEETTSC
T ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccC------ceEEEEEcCCCCCCcEE-EEEcCCCc
Confidence 44456666665 789999999999999987654321 11223432 3556654332 0 2233 33445678
Q ss_pred EEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecCcceeeeeec
Q psy10905 87 VYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~tLrPit~fr 163 (219)
|+.||..+++....+ +. .-...|++++.. +.+|+.|..-|.|.+-|..+-+++..+.
T Consensus 222 i~vwd~~~~~~~~~~----------------~~----~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 222 IKISHYPQCFIVDKW----------------LF----GHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEEEEESCTTCEEEE----------------CC----CCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCceeeee----------------ec----CCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 999999888765443 11 123567788775 6789999999999999999888888776
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.12 Score=48.87 Aligned_cols=137 Identities=10% Similarity=0.001 Sum_probs=91.4
Q ss_pred Cceeeeeeeec----ceeeecccCCcEEEEEccCCceEeeeeee-ccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 14 SSVLHAITAVP----GELWCGESDGNISIYTMSEHSVTSHDTVN-HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 14 ~~~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~vs~~~~l~-h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
...+.+++.-+ ..|-+|..+|.|.||+++++.......+. |.. .|..+.-.+............+-.|+
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~------~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA------SVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS------CEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCC------CeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 34477887753 67899999999999999987644333332 332 46777654432122444445667899
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee---------------cceEEEecceeEEEEEec
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL---------------DTCLYIGTTWGCIVVAEK 153 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~---------------~~~LYIGTtwG~iiVaea 153 (219)
.||..+++...... +.. ....|++++.. +..|+.|..-|.|.+-|.
T Consensus 127 vwdl~~~~~~~~~~---------------~~~----~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~ 187 (753)
T 3jro_A 127 VVEFKENGTTSPII---------------IDA----HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (753)
T ss_dssp EEECCSSSCCCCEE---------------EEC----CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEE
T ss_pred EEEeecCCCcceeE---------------eec----CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEec
Confidence 99998874322221 122 23456666664 478999999999999986
Q ss_pred Ccc----eeeeeecccccceeEEeee
Q psy10905 154 DSL----RPITVFRPYEELVTAILPL 175 (219)
Q Consensus 154 ~tL----rPit~frp~e~~V~~Ii~l 175 (219)
.+- .++..+..|.+.|+++.--
T Consensus 188 ~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 188 NSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred cCCcccceeeeeecCCCCcEEEEEec
Confidence 544 7888899999999988643
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.38 E-value=0.3 Score=40.47 Aligned_cols=142 Identities=10% Similarity=0.026 Sum_probs=91.6
Q ss_pred CCCceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 12 GASSVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 12 g~~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
|-...+.+++.-+ ..|-+|..+|.|.+|++++..+..... |.. ....|..++-.+ +...+.+ -..+..|+
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~---~~~~v~~~~~~~-~~~~l~~-~~~d~~i~ 188 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK--TDS---WDYWYCCVDVSV-SRQMLAT-GDSTGRLL 188 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC--CCC---SSCCEEEEEEET-TTTEEEE-EETTSEEE
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec--cCC---CCCCeEEEEECC-CCCEEEE-ECCCCCEE
Confidence 4445577888765 678899999999999998654432222 211 112455665433 3334444 34556899
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecc---eEEEecceeEEEEEecCc----ceeeee
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDT---CLYIGTTWGCIVVAEKDS----LRPITV 161 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~---~LYIGTtwG~iiVaea~t----LrPit~ 161 (219)
.||.. ++...++ . .....|++++...+ .|+.|..-|.|-+-|..+ -+++..
T Consensus 189 i~d~~-~~~~~~~-----------------~----~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 189 LLGLD-GHEIFKE-----------------K----LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp EEETT-SCEEEEE-----------------E----CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE
T ss_pred EEECC-CCEEEEe-----------------c----cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE
Confidence 99984 3322222 1 23457888888763 789999999999999887 556666
Q ss_pred ecccccceeEEeee--cC-eEEEec
Q psy10905 162 FRPYEELVTAILPL--GG-DIVTIG 183 (219)
Q Consensus 162 frp~e~~V~~Ii~l--~g-~l~TiG 183 (219)
+ +|.+.|+++.-- +| .|++.+
T Consensus 247 ~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 247 M-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp E-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred e-cCCCceEEEEEcCCCCCEEEEEc
Confidence 6 799999988744 34 244444
No 73
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.34 E-value=0.21 Score=42.26 Aligned_cols=141 Identities=13% Similarity=0.123 Sum_probs=88.7
Q ss_pred eeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 16 VLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 16 ~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
.+.++++-+ ..+-+|..+|.|.||+++........... ..+..+..++-.+.... +...-..+..|+.||.
T Consensus 183 ~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-----~~~~~v~~v~~sp~~~~-~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-----ASDTIPTSVTWHPEKDD-TFACGDETGNVSLVNI 256 (357)
T ss_dssp CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-----TCCSCEEEEEECTTSTT-EEEEEESSSCEEEEES
T ss_pred CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec-----cccccccchhhhhcccc-eEEEeecccceeEEEC
Confidence 366776654 45778889999999998865332211111 11234566654443332 3333345667999999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--c-eEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--T-CLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~-~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
.+++....+. .....|++|+... . .|..|-.=|.|-|-|..+-+++..+ .|.+.|
T Consensus 257 ~~~~~~~~~~---------------------~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V 314 (357)
T 4g56_B 257 KNPDSAQTSA---------------------VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFV 314 (357)
T ss_dssp SCGGGCEEEC---------------------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCE
T ss_pred CCCcEeEEEe---------------------ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCE
Confidence 8876554332 2234578888753 2 3555666688999999888777654 799999
Q ss_pred eEEe--eecC-eEEEecc
Q psy10905 170 TAIL--PLGG-DIVTIGR 184 (219)
Q Consensus 170 ~~Ii--~l~g-~l~TiG~ 184 (219)
+++. |.+| .|+|.|.
T Consensus 315 ~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 315 TGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EEEEECSSSTTEEEEEET
T ss_pred EEEEEeCCCCCEEEEEcC
Confidence 9986 4555 4777763
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.2 Score=47.30 Aligned_cols=136 Identities=15% Similarity=0.046 Sum_probs=90.1
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeee-eccCCccccceeEEEeecCCC-CceEEEEEeCCcEEEEE
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTV-NHFHPVISNVDVSFLVSSPST-SAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l-~h~~~~~~~~~V~~L~~~~~~-~~~Vwsyv~pg~~Vyqw 90 (219)
..+.+++.-+ ..|=+|..+|.|.||++..+.......+ .|.. .|..+.-.+.. ...+.+ ..-+..|+.|
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~------~V~~l~~s~~~~~~~l~s-~s~Dg~I~vw 82 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG------PVWRVDWAHPKFGTILAS-CSYDGKVLIW 82 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSS------CEEEEEECCTTSCSEEEE-EETTSCEEEE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcC------ceEEEEecCCCCCCEEEE-EeCCCeEEEE
Confidence 4467777655 6688999999999999886544433333 3433 46666543321 333433 4456679999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEecCcc--eeeeeecc
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAEKDSL--RPITVFRP 164 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVaea~tL--rPit~frp 164 (219)
|..+++...... +......|++++.. ++.++.|+.-|.|.+-+..+- .+...+..
T Consensus 83 d~~~~~~~~~~~-------------------~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 83 KEENGRWSQIAV-------------------HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEETTEEEEEEE-------------------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred ECCCCccccccc-------------------ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence 998876322111 11234568888887 568999999999999886554 55667788
Q ss_pred cccceeEEeeec
Q psy10905 165 YEELVTAILPLG 176 (219)
Q Consensus 165 ~e~~V~~Ii~l~ 176 (219)
+.+.|.++.--+
T Consensus 144 ~~~~v~~l~~~p 155 (753)
T 3jro_A 144 HAIGVNSASWAP 155 (753)
T ss_dssp CSSCEEEEEECC
T ss_pred CCCceEEEEecC
Confidence 899999887543
No 75
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.26 E-value=0.13 Score=44.46 Aligned_cols=146 Identities=9% Similarity=0.073 Sum_probs=92.7
Q ss_pred EeeCCCceeeeeeeec---ceeeecccCCcEEEEEccCC--------ceE-eeeeeeccCCccccceeEEEeecCCCCce
Q psy10905 9 TELGASSVLHAITAVP---GELWCGESDGNISIYTMSEH--------SVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAW 76 (219)
Q Consensus 9 telg~~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~--------~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~ 76 (219)
..++-+..+.+++.-+ .-|-+|..+|.|.||++..+ ... ....-.|.. .+..|.-.+. ...
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~------~v~~l~~~~~-~~~ 195 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK------EGYGLSWNPN-LNG 195 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS------CCCCEEECTT-STT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC------CeEEEEeCCC-CCC
Confidence 3444455567777776 56889999999999999852 111 122223433 2444443332 222
Q ss_pred EEEEEeCCcEEEEEecccceeee-eeeccccccCCCCcccccccccccccCceeeeEeee---cceEEEecceeEEEEEe
Q psy10905 77 VWSYVYPGCSVYQWDTQARSIVN-KLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL---DTCLYIGTTWGCIVVAE 152 (219)
Q Consensus 77 Vwsyv~pg~~Vyqw~~~tr~I~~-~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~---~~~LYIGTtwG~iiVae 152 (219)
....-..+-.|+.||..+.+-.. .++..+ .+......|++++.. +..+..|..-|.|.+-+
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---------------~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKN---------------IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSE---------------EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccce---------------eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 44444566779999998843221 111111 011234558888875 36777888999999999
Q ss_pred cCcc---eeeeeecccccceeEEeeec
Q psy10905 153 KDSL---RPITVFRPYEELVTAILPLG 176 (219)
Q Consensus 153 a~tL---rPit~frp~e~~V~~Ii~l~ 176 (219)
..+. +|+..+++|...|++|.--+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~v~~i~~~p 287 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDAHTAEVNCLSFNP 287 (430)
T ss_dssp TTCSCSSSCSEEEECCSSCEEEEEECS
T ss_pred CCCCCCCcceeEeecCCCCeEEEEeCC
Confidence 8776 79999999999999987554
No 76
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.24 E-value=0.35 Score=38.92 Aligned_cols=135 Identities=12% Similarity=0.151 Sum_probs=85.3
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
.+.+++.-+ ..|-+|..+|.|.+|+++........ ..+. +.++..++-.+ +...+.+ ...+..|+.||..
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~-----~~~~~~~~~~~-~~~~l~~-~~~d~~i~iwd~~ 222 (312)
T 4ery_A 151 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDD-----NPPVSFVKFSP-NGKYILA-ATLDNTLKLWDYS 222 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-CCSS-----CCCEEEEEECT-TSSEEEE-EETTTEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE-eccC-----CCceEEEEECC-CCCEEEE-EcCCCeEEEEECC
Confidence 355665544 67889999999999999865432211 1111 12345554333 3334444 3455689999999
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEee-ecceEEEecceeEEEEEecCcceeeeeecccccceeEE
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI-LDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAI 172 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~-~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~I 172 (219)
+++....+.-.+ ....+-...... .+..|..|..-|.|.+-+..+-+++..+++|++.|.++
T Consensus 223 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 223 KGKCLKTYTGHK-----------------NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 285 (312)
T ss_dssp TTEEEEEECSSC-----------------CSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCcEEEEEEecC-----------------CceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEE
Confidence 988766553211 111111111221 23568888889999999999999999999999998876
Q ss_pred eee
Q psy10905 173 LPL 175 (219)
Q Consensus 173 i~l 175 (219)
.--
T Consensus 286 ~~~ 288 (312)
T 4ery_A 286 ACH 288 (312)
T ss_dssp EEC
T ss_pred eec
Confidence 543
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.21 E-value=0.49 Score=46.00 Aligned_cols=153 Identities=14% Similarity=0.145 Sum_probs=98.9
Q ss_pred ceeeeeeeec----ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 15 SVLHAITAVP----GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 15 ~~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
..+.+++.-+ .-+-+|..+|.|.+|+++...... ....|.. .|..++-.+ +...+.+ ...+-.|+.|
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~-~~~~h~~------~v~~~~~sp-~~~~l~s-~s~dg~v~vw 770 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN-TMFGHTN------SVNHCRFSP-DDELLAS-CSADGTLRLW 770 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE-EECCCSS------CEEEEEECS-STTEEEE-EESSSEEEEE
T ss_pred CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh-eecCCCC------CEEEEEEec-CCCEEEE-EECCCeEEEE
Confidence 3356666655 346688899999999998765332 2223433 366665444 3333443 4455679999
Q ss_pred ecccceeeeeeeccccccCCCC--------ccccc--------------------cc------ccccccCceeeeEeee-
Q psy10905 91 DTQARSIVNKLDCSKLVPCSES--------LQSIC--------------------IE------EPLRQDQCHVTSVCIL- 135 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEs--------l~si~--------------------ie------e~l~~~~~qVtaL~~~- 135 (219)
|..+++....+...+....++. +.+++ ++ .-.......|++++..
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 9999998888876653332211 11110 00 0001234566777765
Q ss_pred -cceEEEecceeEEEEEecCcceeeeeecccccceeEEeeec
Q psy10905 136 -DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPLG 176 (219)
Q Consensus 136 -~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l~ 176 (219)
+..+.+|+.-|.|.+-+..+-+++..+++|.+.|+++.--+
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 48899999999999999999999999999999999887543
No 78
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.19 E-value=0.36 Score=38.52 Aligned_cols=132 Identities=11% Similarity=0.039 Sum_probs=88.5
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
..|-+|..+|.+.+|++............|.+ .+..+.-.+.....+......+..|+.||..+++....+.-
T Consensus 141 ~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~- 213 (340)
T 4aow_A 141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE------WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG- 213 (340)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSSCSS------CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-
T ss_pred ccceeecCCCeEEEEEeCCCceEEEEeccccC------cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-
Confidence 66788889999999987755443333333332 24444332233334555666777899999999887765421
Q ss_pred ccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccccceeEEeeec-CeEEE
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPLG-GDIVT 181 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l~-g~l~T 181 (219)
-...|++++.. +.+|+.|..-|.|.+-|..+.+++..+... +.|.++.--+ +.+++
T Consensus 214 --------------------h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 214 --------------------HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLC 272 (340)
T ss_dssp --------------------CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEE
T ss_pred --------------------CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceee
Confidence 22357888775 468889999999999999999999887654 5677766554 34554
Q ss_pred ecc
Q psy10905 182 IGR 184 (219)
Q Consensus 182 iG~ 184 (219)
.|.
T Consensus 273 ~~~ 275 (340)
T 4aow_A 273 AAT 275 (340)
T ss_dssp EEE
T ss_pred ccC
Confidence 443
No 79
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.14 E-value=0.51 Score=40.20 Aligned_cols=141 Identities=15% Similarity=0.068 Sum_probs=85.1
Q ss_pred ceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 15 SVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 15 ~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..+.++++-+ .-|=.|..||.|.||+++.......-... ..+..+..++-.+.+. .+...-.-+-.|+.||
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~-~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS-----APGYLPTSLAWHPQQS-EVFVFGDENGTVSLVD 243 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------CCCEEEEEECSSCT-TEEEEEETTSEEEEEE
T ss_pred CceEEEEecCCCCCceeeeccccccccccccccceeeeeecc-----eeeccceeeeecCCCC-cceEEeccCCcEEEEE
Confidence 3466666655 34567888999999999865433221111 1122355555333233 3444445566899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCcceeeeeecccccc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDSLRPITVFRPYEEL 168 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~tLrPit~frp~e~~ 168 (219)
..+++.+.+|. . -...|++++... ..|.-|..=|.|-|-|..+-+.+ .++.|++.
T Consensus 244 ~~~~~~~~~~~-----------------~----h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~ 301 (344)
T 4gqb_B 244 TKSTSCVLSSA-----------------V----HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDF 301 (344)
T ss_dssp SCC--CCEEEE-----------------C----CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSC
T ss_pred CCCCcEEEEEc-----------------C----CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCC
Confidence 99887665442 1 234588888763 23556767788999998776654 57899999
Q ss_pred eeEEeee-cC-e-EEEec
Q psy10905 169 VTAILPL-GG-D-IVTIG 183 (219)
Q Consensus 169 V~~Ii~l-~g-~-l~TiG 183 (219)
|+++.=- +| . |+|.|
T Consensus 302 V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 302 VRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEEEEECSSSTTEEEEEE
T ss_pred EEEEEEeCCCCeEEEEEc
Confidence 9987521 23 2 55665
No 80
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.11 E-value=0.58 Score=40.22 Aligned_cols=130 Identities=12% Similarity=0.138 Sum_probs=86.2
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCC-------------------CCc
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPS-------------------TSA 75 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~-------------------~~~ 75 (219)
+.+++.-+ .-|-+|..+|.|.||+++...... ....|..+ |..+.-.+. ...
T Consensus 237 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~-~~~~h~~~------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 309 (410)
T 1vyh_C 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-ELREHRHV------VECISWAPESSYSSISEATGSETKKSGKPGP 309 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCSSC------EEEEEECCSCGGGGGGGCCSCC-------CC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceee-EecCCCce------EEEEEEcCcccccchhhhccccccccCCCCC
Confidence 44444333 678999999999999998654332 22233322 333322111 012
Q ss_pred eEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEec
Q psy10905 76 WVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEK 153 (219)
Q Consensus 76 ~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea 153 (219)
.+. .-..+..|+.||..+++....+. . -...|++++... ..|+.|..-|.|-+-|.
T Consensus 310 ~l~-sgs~D~~i~iwd~~~~~~~~~~~-----------------~----h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 310 FLL-SGSRDKTIKMWDVSTGMCLMTLV-----------------G----HDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp EEE-EEETTSEEEEEETTTTEEEEEEE-----------------C----CSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred EEE-EEeCCCeEEEEECCCCceEEEEE-----------------C----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 233 33455679999999988765542 1 123577777753 67888888899999999
Q ss_pred CcceeeeeecccccceeEEeee
Q psy10905 154 DSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 154 ~tLrPit~frp~e~~V~~Ii~l 175 (219)
.+-+++..+..|++.|.++.--
T Consensus 368 ~~~~~~~~~~~h~~~v~~l~~~ 389 (410)
T 1vyh_C 368 KNKRCMKTLNAHEHFVTSLDFH 389 (410)
T ss_dssp TTSCCCEEEECCSSCEEEEEEC
T ss_pred CCCceEEEEcCCCCcEEEEEEc
Confidence 9999999999999999887643
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.03 E-value=0.59 Score=45.44 Aligned_cols=140 Identities=9% Similarity=0.036 Sum_probs=96.8
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.++++-+ .-|=+|..+|.|.||++..+..... .-.|.+ .|..++-++ +...+-+. ..+..|+.||
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~-~~~h~~------~v~~~~~s~-~~~~l~s~-~~d~~v~vwd 685 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD-IKAHED------EVLCCAFSS-DDSYIATC-SADKKVKIWD 685 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE-ECCCSS------CEEEEEECT-TSSEEEEE-ETTSEEEEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE-eccCCC------CEEEEEEec-CCCEEEEE-eCCCeEEEEE
Confidence 34467777666 7788888999999999986543211 113433 466665444 33344444 3456799999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec----ceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD----TCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~----~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
..+++...++.- ....|++++... ..+..|..-|.|.+-+..+-+++..++.|.+
T Consensus 686 ~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~ 744 (1249)
T 3sfz_A 686 SATGKLVHTYDE---------------------HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN 744 (1249)
T ss_dssp TTTCCEEEEEEC---------------------CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS
T ss_pred CCCCceEEEEcC---------------------CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC
Confidence 999987776531 234577777754 3577788889999999999999999999999
Q ss_pred ceeEEeeec-C-eEEEec
Q psy10905 168 LVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 168 ~V~~Ii~l~-g-~l~TiG 183 (219)
.|+++.--+ | .++|.+
T Consensus 745 ~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp CEEEEEECSSTTEEEEEE
T ss_pred CEEEEEEecCCCEEEEEE
Confidence 999886544 3 244443
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.97 E-value=0.15 Score=42.89 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=87.0
Q ss_pred ceeeecccCCcEEEEEccCCceE--eee-eeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeee
Q psy10905 25 GELWCGESDGNISIYTMSEHSVT--SHD-TVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKL 101 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs--~~~-~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~L 101 (219)
.=+|.|..+|.|.||++....-. ... .-.| +..|..++-.+.+...+.+ -.-+..|+.||..+++....+
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h------~~~V~~~~~~p~~~~~l~s-~s~dg~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH------TAPVLDIAWCPHNDNVIAS-GSEDCTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCC------SSCEEEEEECTTCTTEEEE-EETTSEEEEEECCTTCCSSCB
T ss_pred EEEEEEcCCCEEEEEECccCCCCCCCCceEecC------CCCEEEEEeCCCCCCEEEE-EeCCCeEEEEEccCCCCcccc
Confidence 45788888999999998753221 111 1123 2347777654423343444 455678999999988654322
Q ss_pred eccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCcceeeeee--cccccceeEEeee
Q psy10905 102 DCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDSLRPITVF--RPYEELVTAILPL 175 (219)
Q Consensus 102 D~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~tLrPit~f--rp~e~~V~~Ii~l 175 (219)
. +.++. ++ .....|++++... +.|+.|..-|.|.+-|..+-+++..+ ..|.+.|.++.--
T Consensus 121 ~--------~~~~~--~~----~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 121 R--------EPVIT--LE----GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp C--------SCSEE--EE----CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC
T ss_pred C--------CceEE--ec----CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC
Confidence 1 11111 22 2345788888874 46889999999999999999999999 8899999988754
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.96 E-value=0.29 Score=40.47 Aligned_cols=133 Identities=9% Similarity=0.008 Sum_probs=83.0
Q ss_pred eeecccCCcEEEEEccC---------CceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccccee
Q psy10905 27 LWCGESDGNISIYTMSE---------HSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSI 97 (219)
Q Consensus 27 LW~G~~~g~Isi~~l~~---------~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I 97 (219)
+=+|..||.|.+|+.+. ..+.......|.+ +|..+.-.+...........-+-.|+.||.++++.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~ 161 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN------EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ 161 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS------CEEEEECCC---CCEEEEEETTCCEEEEESSSSCE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC------CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 55566677777775553 3322222223322 46666643311222333445666899999998876
Q ss_pred eeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceee-eeecc-cccceeEEe
Q psy10905 98 VNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPI-TVFRP-YEELVTAIL 173 (219)
Q Consensus 98 ~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPi-t~frp-~e~~V~~Ii 173 (219)
....+- .....|++++... ..|..|..-|.|-+-|..+.+++ ..|.. |++.|+++.
T Consensus 162 ~~~~~~--------------------~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 162 YIVHSA--------------------KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVK 221 (343)
T ss_dssp EEEECC--------------------CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEE
T ss_pred EEEEec--------------------CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEE
Confidence 433211 1223377777754 67778899999999999999888 78888 999999887
Q ss_pred eec-C-eEEEeccc
Q psy10905 174 PLG-G-DIVTIGRG 185 (219)
Q Consensus 174 ~l~-g-~l~TiG~G 185 (219)
--+ | .|++.+++
T Consensus 222 fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 222 FADNGYWMVVECDQ 235 (343)
T ss_dssp ECTTSSEEEEEESS
T ss_pred EeCCCCEEEEEeCC
Confidence 543 3 36666655
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.95 E-value=0.29 Score=42.15 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=91.2
Q ss_pred ceeeeeeeec---ceeeecccCCcEEEEEccCCc-eEeeeee-eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 15 SVLHAITAVP---GELWCGESDGNISIYTMSEHS-VTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 15 ~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~-vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
..+.+++.-+ .-+-+|..+|.|.||+++... ......+ .|. ..|..++-.+ +...+...-.-+..|+.
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~------~~v~~i~~~p-~~~~~l~tg~~dg~v~v 304 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT------AEVNCLSFNP-YSEFILATGSADKTVAL 304 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS------SCEEEEEECS-SCTTEEEEEETTSEEEE
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC------CCeEEEEeCC-CCCCEEEEEeCCCeEEE
Confidence 3366777654 678889899999999999652 1111112 332 2466776544 23335545555667999
Q ss_pred Eeccc-ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCc----------
Q psy10905 90 WDTQA-RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDS---------- 155 (219)
Q Consensus 90 w~~~t-r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~t---------- 155 (219)
||..+ ++....+. .....|++++... ..|..|..-|.|.|-+..+
T Consensus 305 wd~~~~~~~~~~~~---------------------~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 363 (430)
T 2xyi_A 305 WDLRNLKLKLHSFE---------------------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 363 (430)
T ss_dssp EETTCTTSCSEEEE---------------------CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHH
T ss_pred EeCCCCCCCeEEee---------------------cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccc
Confidence 99987 33222221 2245688888865 2377788889999999877
Q ss_pred ----ceeeeeecccccceeEEeeec-C--eEEEec
Q psy10905 156 ----LRPITVFRPYEELVTAILPLG-G--DIVTIG 183 (219)
Q Consensus 156 ----LrPit~frp~e~~V~~Ii~l~-g--~l~TiG 183 (219)
.+++..+..|.+.|+.+.--+ | .|++.+
T Consensus 364 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 364 EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 467888889999999887554 2 355544
No 85
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.92 E-value=0.68 Score=39.36 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=84.7
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
+.+++.-+ ..|=+|..+|.|.||++.+...... .-.|.. .|..+.-.+ +...+.+ ..-+..|+.||..+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~-~~~h~~------~v~~~~~~p-~~~~l~s-~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMI-LQGHEQ------DIYSLDYFP-SGDKLVS-GSGDRTVRIWDLRT 196 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-ECCCSS------CEEEEEECT-TSSEEEE-EETTSEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE-EccCCC------CEEEEEEcC-CCCEEEE-ecCCCcEEEEECCC
Confidence 45555554 7788899999999999986643321 123433 355555333 3333433 34566899999999
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee---cceEEEecceeEEEEEecCcceeeeee-------cc
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL---DTCLYIGTTWGCIVVAEKDSLRPITVF-------RP 164 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~---~~~LYIGTtwG~iiVaea~tLrPit~f-------rp 164 (219)
++....+... ..|++++.. +..|..|..-|.|-+-|..+-+++..+ ..
T Consensus 197 ~~~~~~~~~~----------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 197 GQCSLTLSIE----------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG 254 (393)
T ss_dssp TEEEEEEECS----------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CC
T ss_pred CeeEEEEEcC----------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCC
Confidence 8876555321 135666664 367888999999999998877766665 56
Q ss_pred cccceeEEeee
Q psy10905 165 YEELVTAILPL 175 (219)
Q Consensus 165 ~e~~V~~Ii~l 175 (219)
|.+.|.++.--
T Consensus 255 h~~~v~~v~~~ 265 (393)
T 1erj_A 255 HKDSVYSVVFT 265 (393)
T ss_dssp CSSCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 78888887644
No 86
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.87 E-value=0.1 Score=43.84 Aligned_cols=113 Identities=10% Similarity=0.061 Sum_probs=79.2
Q ss_pred cceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeec
Q psy10905 24 PGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDC 103 (219)
Q Consensus 24 ~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~ 103 (219)
+..+|.|..+|.+..++++++.+.+...+.. ...++ .+...+|..... -.||.+|.+|++++-+.+-
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~---------~~~~~---~~~~~l~~~~~~-g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGS---------VNDFI---VDGNRIYLVDQN-DRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCC---------EEEEE---EETTEEEEEETT-CCEEEEETTTCCEEEEECT
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCC---------CCCce---EECCEEEEEcCC-CeEEEEECCCCcEEEeecc
Confidence 3889999889999999998887776654321 12233 245568877654 4689999999998776541
Q ss_pred cccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 104 SKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 104 skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
. + ...+++..+.++.||+|+.-|-|.++|+.+=+.+..++...+.+
T Consensus 306 ~---~-----------------~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~ 351 (376)
T 3q7m_A 306 L---L-----------------HRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGF 351 (376)
T ss_dssp T---T-----------------TSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCB
T ss_pred c---C-----------------CCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcc
Confidence 1 1 11233556678999999999999999998888776665433333
No 87
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.82 E-value=0.56 Score=37.68 Aligned_cols=125 Identities=10% Similarity=0.129 Sum_probs=79.4
Q ss_pred eeeeeec--ceeeeccc-CCcEEEEEccCCceEeeeeeeccCCc--cccceeEEEeecCCCCceEEEEE-eCCcEEEEEe
Q psy10905 18 HAITAVP--GELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPV--ISNVDVSFLVSSPSTSAWVWSYV-YPGCSVYQWD 91 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~--~~~~~V~~L~~~~~~~~~Vwsyv-~pg~~Vyqw~ 91 (219)
+.+++-+ ..+|++.. ++.|.+|++++..+.....+.+...+ ........++.++ +...+|..- ..+..|+.||
T Consensus 92 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEc
Confidence 3444444 55776644 68999999987776544444322111 0011244454433 445577766 4577899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEee--ecceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--LDTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
.+++++..+++...- .+.+++. .+..||++..-|.|.+.|..+.+.+..+..
T Consensus 171 ~~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 171 GGNIKLKTAIQNTGK---------------------MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp TTTTEEEEEECCCCT---------------------TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCceEEEecCCCC---------------------ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc
Confidence 999999887762210 1223333 457899999999999999988888766654
No 88
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.77 E-value=0.13 Score=43.34 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=77.1
Q ss_pred ecceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeee
Q psy10905 23 VPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 23 v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
|-.|=|-|..++.|++++.+.+.+.-.-....-..+. +-....|+ -+...+|.....+-.|+.||.+|++++.++.
T Consensus 6 v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~l-g~~~~~i~---~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 6 ITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKL-GDVAQSMV---IRDGIGWIVVNNSHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp EEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCC-BSCEEEEE---EETTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred EEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCccc-CccceEEE---EECCEEEEEEcCCCEEEEEECcccEEEEEcC
Confidence 3467788988999999999877765321110001111 11234454 2456799999988899999999999998882
Q ss_pred ccccccCCCCcccccccccccccCceeeeEee-ecceEEEec-ceeEEEEEecCcceeeeee
Q psy10905 103 CSKLVPCSESLQSICIEEPLRQDQCHVTSVCI-LDTCLYIGT-TWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 103 ~skl~PcSEsl~si~iee~l~~~~~qVtaL~~-~~~~LYIGT-twG~iiVaea~tLrPit~f 162 (219)
- . .....|++ .+++|||.. --|-|.+.|..+.+.+..+
T Consensus 82 ~------~----------------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 82 G------F----------------TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp C------C----------------SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred C------C----------------CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 1 1 12335666 567999998 5588999999888765443
No 89
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.38 Score=39.74 Aligned_cols=136 Identities=11% Similarity=0.007 Sum_probs=76.3
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
.+.++++-+ .-|-+|..+|.|.||+++..... ......|.. +|..+.-.+ +...+-+.- -+ .|+.||.
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~------~v~~l~fs~-~g~~l~s~~-~~-~v~iwd~ 242 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA------KIKEVKFAD-NGYWMVVEC-DQ-TVVCFDL 242 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS------CEEEEEECT-TSSEEEEEE-SS-BEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC------CEEEEEEeC-CCCEEEEEe-CC-eEEEEEc
Confidence 356666655 67888999999999999976543 211123543 466666433 344454544 45 9999999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecc-eeEEEEEecC----ccee----eee
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTT-WGCIVVAEKD----SLRP----ITV 161 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTt-wG~iiVaea~----tLrP----it~ 161 (219)
.+.+...++.-- ..++ ..... ++++.. +.+|.+|.. -|.|-|-+-. .... ...
T Consensus 243 ~~~~~~~~~~~~------------~~~~--~~~~~--~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~ 306 (343)
T 3lrv_A 243 RKDVGTLAYPTY------------TIPE--FKTGT--VTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALC 306 (343)
T ss_dssp TSSTTCBSSCCC------------BC-------CC--EEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECC
T ss_pred CCCCcceeeccc------------cccc--ccccc--eEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEe
Confidence 887654433211 0000 00000 456665 356666556 6666666432 2232 456
Q ss_pred ecccccceeEEeeec
Q psy10905 162 FRPYEELVTAILPLG 176 (219)
Q Consensus 162 frp~e~~V~~Ii~l~ 176 (219)
|.||.++++.++...
T Consensus 307 ~~~~~~~~~~l~~~~ 321 (343)
T 3lrv_A 307 LQSDTADFTDMDVVC 321 (343)
T ss_dssp C----CCCCEEEEEE
T ss_pred cCccccccceeEEEe
Confidence 888888999988765
No 90
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.70 E-value=0.19 Score=39.68 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=62.7
Q ss_pred EEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcce
Q psy10905 80 YVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLR 157 (219)
Q Consensus 80 yv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLr 157 (219)
++--+..|+.||.+|++.+..+.... ....|++++... .+|..|..-|.|.+-+..+.+
T Consensus 40 Avg~D~tV~iWd~~tg~~~~~~~~~~-------------------~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 40 AVALDNSVYLWSASSGDILQLLQMEQ-------------------PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCS-------------------TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEeCCEEEEEECCCCCEEEEEEecC-------------------CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 34447889999999999887665432 334588888754 788999999999999999999
Q ss_pred eeeeecccccceeEEeeec
Q psy10905 158 PITVFRPYEELVTAILPLG 176 (219)
Q Consensus 158 Pit~frp~e~~V~~Ii~l~ 176 (219)
++..+..|...+.++-+-.
T Consensus 101 ~~~~~~~h~~~~~~~~~~~ 119 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNS 119 (318)
T ss_dssp EEEEEECCSSCEEEEEEET
T ss_pred eEEEecCccceEEEeecCC
Confidence 9999999999988876544
No 91
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.69 E-value=0.73 Score=37.99 Aligned_cols=154 Identities=8% Similarity=0.064 Sum_probs=95.0
Q ss_pred Cceeeeeeeec---ceeeecccCCcEEEEEccCCceE----eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcE
Q psy10905 14 SSVLHAITAVP---GELWCGESDGNISIYTMSEHSVT----SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCS 86 (219)
Q Consensus 14 ~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs----~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~ 86 (219)
...+.++++-+ .-|=+|..||.|.+|++...... ....-.|..+ |..++-.+ +...+ ..-.-+..
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~------v~~~~~s~-dg~~l-~s~s~D~~ 88 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI------VQDCTLTA-DGAYA-LSASWDKT 88 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSC------EEEEEECT-TSSEE-EEEETTSE
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCccc------EEEEEECC-CCCEE-EEEeCCCE
Confidence 34477877764 56889999999999988743221 1122234333 44444322 33333 33455678
Q ss_pred EEEEecccceeeeeeecc-------ccccCCCCc---------ccccccc----cccccCceeeeEeeec--------ce
Q psy10905 87 VYQWDTQARSIVNKLDCS-------KLVPCSESL---------QSICIEE----PLRQDQCHVTSVCILD--------TC 138 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~s-------kl~PcSEsl---------~si~iee----~l~~~~~qVtaL~~~~--------~~ 138 (219)
|+.||.++++...++.-- .+-|....| +=-+++. .+......|+++.... ..
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 999999999887665311 112222111 1111111 0112234577777754 26
Q ss_pred EEEecceeEEEEEecCcceeeeeecccccceeEEeee
Q psy10905 139 LYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 139 LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l 175 (219)
|+.|..-|.|-+-+..+.++...|..|.+.|.++.--
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s 205 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS 205 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc
Confidence 8889999999999999999999999999999987644
No 92
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.63 E-value=0.34 Score=40.57 Aligned_cols=122 Identities=8% Similarity=-0.039 Sum_probs=76.9
Q ss_pred cccCCcEEEEEccC--CceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeeccccc
Q psy10905 30 GESDGNISIYTMSE--HSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLV 107 (219)
Q Consensus 30 G~~~g~Isi~~l~~--~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~ 107 (219)
|..+|.+.||.++. +.+.....+.+... +..++-.+ ...++..-..+..|+.||.++++....+....+
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~------~~~~~~s~--~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~- 165 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTGFQ------PKSVRFID--NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKY- 165 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECSSC------BCCCEESS--SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHH-
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCCCC------ceEEEEeC--CCeEEEEeCCCCeEEEEECCCCeEeeecCcccc-
Confidence 44455455555553 45555454544332 11233222 345666666677899999999988754432221
Q ss_pred cCCCCcccccccccccccCceeeeEeeec-ceEE-EecceeEEEEEecCcceeeeeecccccceeEEeee
Q psy10905 108 PCSESLQSICIEEPLRQDQCHVTSVCILD-TCLY-IGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 108 PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LY-IGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l 175 (219)
......|++++... +.+| .|..-|.|.+-+..+.+++..+.++...++++.--
T Consensus 166 ---------------~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 220 (433)
T 3bws_A 166 ---------------KKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYD 220 (433)
T ss_dssp ---------------HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEE
T ss_pred ---------------cccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEc
Confidence 12345788888743 4444 45556999999999999999999888888887644
No 93
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.8 Score=37.92 Aligned_cols=138 Identities=15% Similarity=0.159 Sum_probs=84.4
Q ss_pred CceeeeeeeecceeeecccCCcEEEEEccCCceEeeeeee---ccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 14 SSVLHAITAVPGELWCGESDGNISIYTMSEHSVTSHDTVN---HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 14 ~~~i~s~a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~---h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
...+.+++.-+..|=+|..||.|.+|+++.+.......+. |.+ .|..++-.+ +.. ....-..+..|+.|
T Consensus 14 ~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~------~v~~v~~sp-~~~-~las~s~D~~v~iw 85 (330)
T 2hes_X 14 KEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKK------AIRSVAWRP-HTS-LLAAGSFDSTVSIW 85 (330)
T ss_dssp SSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCS------CEEEEEECT-TSS-EEEEEETTSCEEEE
T ss_pred CCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccC------CEEEEEECC-CCC-EEEEEeCCCcEEEE
Confidence 3447777776678889999999999999876554444442 433 356665433 222 33333456678999
Q ss_pred ecccceee-eeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEec----Ccceeeeeec
Q psy10905 91 DTQARSIV-NKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEK----DSLRPITVFR 163 (219)
Q Consensus 91 ~~~tr~I~-~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea----~tLrPit~fr 163 (219)
|.++.+-. ...++. +. ++. -...|++++... .+|..|..=|.|.+-|. ...+++..++
T Consensus 86 ~~~~~~~~~~~~~~~---------~~--~~~----h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 86 AKEESADRTFEMDLL---------AI--IEG----HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp EC-------CCCEEE---------EE--EC--------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred EcccCcCccccceeE---------EE--EcC----CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 98643210 000110 01 222 345688888864 57777777889999886 3457888999
Q ss_pred ccccceeEEee
Q psy10905 164 PYEELVTAILP 174 (219)
Q Consensus 164 p~e~~V~~Ii~ 174 (219)
.|.+.|+++.-
T Consensus 151 ~h~~~v~~v~~ 161 (330)
T 2hes_X 151 EHSQDVKHVIW 161 (330)
T ss_dssp CCSSCEEEEEE
T ss_pred cCCCceEEEEE
Confidence 99999998863
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.56 E-value=0.38 Score=40.24 Aligned_cols=146 Identities=14% Similarity=0.190 Sum_probs=94.8
Q ss_pred eeeeeeeecc----eeeecccCCcEEEEEccCCceEee-------------------------------------ee--e
Q psy10905 16 VLHAITAVPG----ELWCGESDGNISIYTMSEHSVTSH-------------------------------------DT--V 52 (219)
Q Consensus 16 ~i~s~a~v~~----eLW~G~~~g~Isi~~l~~~~vs~~-------------------------------------~~--l 52 (219)
.|.+++..+. .|=+|..+|.|.+|++.+...... .. -
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 3667777662 578888999999999875433100 00 1
Q ss_pred eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc-cceeeeeeeccccccCCCCcccccccccccccCceeee
Q psy10905 53 NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ-ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTS 131 (219)
Q Consensus 53 ~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~-tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVta 131 (219)
.| ...|..++-.+ +...+-+. -+..|+.||.+ +++....++.. |. .++ .-...|++
T Consensus 175 ~h------~~~v~~~~~~~-~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~---~~-------~~~----~~~~~v~~ 231 (447)
T 3dw8_B 175 AH------TYHINSISINS-DYETYLSA--DDLRINLWHLEITDRSFNIVDIK---PA-------NME----ELTEVITA 231 (447)
T ss_dssp CC------SSCCCEEEECT-TSSEEEEE--CSSEEEEEETTEEEEEEEEEECC---CS-------SGG----GCCCCEEE
T ss_pred CC------CcceEEEEEcC-CCCEEEEe--CCCeEEEEECCCCCceeeeeecc---cc-------ccc----ccCcceEE
Confidence 12 22355555434 44455565 48899999999 56666666554 21 122 34567899
Q ss_pred Eeeec---ceEEEecceeEEEEEecCccee----eeeeccccc------------ceeEEeeec-Ce-EEEecc
Q psy10905 132 VCILD---TCLYIGTTWGCIVVAEKDSLRP----ITVFRPYEE------------LVTAILPLG-GD-IVTIGR 184 (219)
Q Consensus 132 L~~~~---~~LYIGTtwG~iiVaea~tLrP----it~frp~e~------------~V~~Ii~l~-g~-l~TiG~ 184 (219)
++... ..|..|..-|.|.+-|..+.++ +..|..+++ .|.++.--+ |. |++.+.
T Consensus 232 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 99875 5799999999999999888776 788888886 787776443 42 555544
No 95
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.50 E-value=1.1 Score=40.75 Aligned_cols=133 Identities=15% Similarity=0.122 Sum_probs=89.6
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeee-e-----eeccCCccccceeEEEeecCCCCceEEEEEeCCcEE
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHD-T-----VNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSV 87 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~-~-----l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~V 87 (219)
.+.++++-+ ..|=+|..||.|.+|++.++...... . ..|.+ .|..++-.+ +...+ .....+-.|
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~------~V~~v~~sp-dg~~l-~s~s~D~~v 263 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG------SVFGLTWSP-DGTKI-ASASADKTI 263 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS------CEEEEEECT-TSSEE-EEEETTSEE
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCC------CEEEEEECC-CCCEE-EEEeCCCeE
Confidence 366766655 66778889999999998865433211 0 02432 466665433 33333 334456789
Q ss_pred EEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 88 YQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
..||.++++...++.... ....++.++...+..|..|..-|.|.+-+..+-+++..+..|.+
T Consensus 264 ~lWd~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~ 325 (611)
T 1nr0_A 264 KIWNVATLKVEKTIPVGT------------------RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK 325 (611)
T ss_dssp EEEETTTTEEEEEEECCS------------------SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS
T ss_pred EEEeCCCCceeeeecCCC------------------CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC
Confidence 999999999888775431 01112334444667888888889999999888889999999999
Q ss_pred ceeEEee
Q psy10905 168 LVTAILP 174 (219)
Q Consensus 168 ~V~~Ii~ 174 (219)
.|+++.-
T Consensus 326 ~v~~l~~ 332 (611)
T 1nr0_A 326 AITALSS 332 (611)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 9988763
No 96
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.50 E-value=0.4 Score=40.11 Aligned_cols=161 Identities=12% Similarity=0.092 Sum_probs=87.0
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCce---------E-eeeeeeccCC--ccc----cceeEEEeecCCCC-
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSV---------T-SHDTVNHFHP--VIS----NVDVSFLVSSPSTS- 74 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~v---------s-~~~~l~h~~~--~~~----~~~V~~L~~~~~~~- 74 (219)
...|.+++.=+ .-|=+|..+|.|.||++.+..- . ....-.|..+ ... +..|..++-.+...
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 34477777666 6788899999999999886541 1 1122234310 000 12355555433222
Q ss_pred ceEEEEEeCCcEEEEEecccceeeee-------------------eeccccccCCCCcccccccccccccCceeeeEeee
Q psy10905 75 AWVWSYVYPGCSVYQWDTQARSIVNK-------------------LDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL 135 (219)
Q Consensus 75 ~~Vwsyv~pg~~Vyqw~~~tr~I~~~-------------------LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~ 135 (219)
..+-+. ..+..|+.||..+++.... +...++-|..-.+..-.....+......|++++..
T Consensus 108 ~~l~s~-s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 108 AQFLLS-TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SEEEEE-ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred ceEEEe-CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 233333 5567899999988765311 00000001000000000000012345678888886
Q ss_pred c--ceEEEecceeEEEEEecC-cceeee-------eecccccceeEEeeec
Q psy10905 136 D--TCLYIGTTWGCIVVAEKD-SLRPIT-------VFRPYEELVTAILPLG 176 (219)
Q Consensus 136 ~--~~LYIGTtwG~iiVaea~-tLrPit-------~frp~e~~V~~Ii~l~ 176 (219)
. ..|..| .-|.|.+-|.. .-+++. .+..|.+.|+++.--+
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 236 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP 236 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC
Confidence 4 677778 78999999977 445554 3667888888877443
No 97
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.50 E-value=0.3 Score=40.93 Aligned_cols=119 Identities=8% Similarity=0.018 Sum_probs=79.6
Q ss_pred eeeeecceeeecccCCcEEEEEccCCceEeeeeeeccCC---ccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 19 AITAVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHP---VISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 19 s~a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~---~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
+.++.+..||++..+|.|..|+.+++.+.+...+....+ ..........+ .+...||..... -.||.+|.+|+
T Consensus 48 ~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~v~~~~-g~l~a~d~~tG 123 (376)
T 3q7m_A 48 HPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT---VSGGHVYIGSEK-AQVYALNTSDG 123 (376)
T ss_dssp CCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE---EETTEEEEEETT-SEEEEEETTTC
T ss_pred ccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce---EeCCEEEEEcCC-CEEEEEECCCC
Confidence 445555899999889999999998888887766532211 00111122233 245568876644 57999999999
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeee
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~f 162 (219)
+++-+.+...-+ .++..+.++.+|+||..|.|...|+.+=+.+--+
T Consensus 124 ~~~W~~~~~~~~---------------------~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 124 TVAWQTKVAGEA---------------------LSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp CEEEEEECSSCC---------------------CSCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCCce---------------------EcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 999877664310 1123456899999999999999998766554333
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.47 E-value=0.52 Score=46.16 Aligned_cols=134 Identities=14% Similarity=0.045 Sum_probs=90.7
Q ss_pred EeeCCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcE
Q psy10905 9 TELGASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCS 86 (219)
Q Consensus 9 telg~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~ 86 (219)
..+|-+..+.++|+=+ .-|=+|..+|.|.||+....... ..+.|. ..|..|+-.+ .. .-.....+..
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--~~~~~~------~~V~~l~fsp--g~-~L~S~s~D~~ 80 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--IKLEDR------SAIKEMRFVK--GI-YLVVINAKDT 80 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--EECSSC------CCEEEEEEET--TT-EEEEEETTCE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--EEcCCC------CCEEEEEEcC--CC-EEEEEECcCe
Confidence 4456667788888776 66778999999999976654332 223342 2466665433 22 3334456788
Q ss_pred EEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceee-----
Q psy10905 87 VYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPI----- 159 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPi----- 159 (219)
|+.||.++++.+..+. | ...|++++.. ++.|++|+.-|.|.+-|..+-+..
T Consensus 81 v~lWd~~~~~~~~~~~------------------~----~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~ 138 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVF------------------V----PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD 138 (902)
T ss_dssp EEEEETTTCSEEEEEE------------------C----SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEc------------------C----CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceec
Confidence 9999999998776652 0 1257888775 489999999999999997765543
Q ss_pred ------eeecccccceeEEeee
Q psy10905 160 ------TVFRPYEELVTAILPL 175 (219)
Q Consensus 160 ------t~frp~e~~V~~Ii~l 175 (219)
..++.|.+.|++|.--
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEE
T ss_pred cccccccccccCCCCeEEEEEc
Confidence 2345677778776543
No 99
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.46 E-value=0.12 Score=42.41 Aligned_cols=141 Identities=10% Similarity=0.027 Sum_probs=82.3
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeee-eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
.|.++++-+ ..|-+|..+|.|.||++..+.......+ .|.. .|..++-.+ +...+.+. ..+..|+.||.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~------~v~~~~~s~-~~~~l~s~-s~d~~v~vwd~ 84 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK------IVTCVDWAP-KSNRIVTC-SQDRNAYVYEK 84 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS------CEEEEEECT-TTCCEEEE-ETTSSEEEC--
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc------eEEEEEEeC-CCCEEEEE-eCCCeEEEEEc
Confidence 367777765 7788998999999999987643322222 2322 466665433 23334433 44567999999
Q ss_pred ccce-eeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcce---eeeeecc-c
Q psy10905 93 QARS-IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLR---PITVFRP-Y 165 (219)
Q Consensus 93 ~tr~-I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLr---Pit~frp-~ 165 (219)
++++ ..... .+. .....|++++.. +..|+.|..-|.|.+-+..+-+ .+..+.. |
T Consensus 85 ~~~~~~~~~~---------------~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h 145 (377)
T 3dwl_C 85 RPDGTWKQTL---------------VLL----RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPL 145 (377)
T ss_dssp ----CCCCEE---------------ECC----CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSC
T ss_pred CCCCceeeee---------------Eec----ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeeccc
Confidence 9887 11100 111 234468888875 4689999999999998876655 3555555 9
Q ss_pred ccceeEEeeec-C-eEEEec
Q psy10905 166 EELVTAILPLG-G-DIVTIG 183 (219)
Q Consensus 166 e~~V~~Ii~l~-g-~l~TiG 183 (219)
.+.|.+|.--+ | .|++.+
T Consensus 146 ~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 146 RSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CSCEEEEEECTTSSEEEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEe
Confidence 99999887543 3 255444
No 100
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.42 E-value=0.81 Score=36.77 Aligned_cols=141 Identities=12% Similarity=0.147 Sum_probs=89.6
Q ss_pred eeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 18 HAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
+++++-+ ..|+.+..+|.|.+|++++..+.....+.... +...+..++-++ +...+|..-..+..|+.||.+++
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDG---KEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS---SCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTC
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC---CCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCC
Confidence 3444443 77999988999999999877665443331111 112344444333 55568887777799999999999
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEee--ecceEEEecc-eeEEEEEecCcceeeeeecccccceeEE
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--LDTCLYIGTT-WGCIVVAEKDSLRPITVFRPYEELVTAI 172 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~~~~LYIGTt-wG~iiVaea~tLrPit~frp~e~~V~~I 172 (219)
+++.+++..+ | .+++. .+++||+... -|-|.+.|..+.+.+..+.. .+.+..+
T Consensus 264 ~~~~~~~~~~--~---------------------~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~ 319 (353)
T 3vgz_A 264 NILAKVAAPE--S---------------------LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSL 319 (353)
T ss_dssp CEEEEEECSS--C---------------------CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEE
T ss_pred cEEEEEEcCC--C---------------------ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeE
Confidence 9988887422 1 12333 3467999874 68999999999888877654 3344444
Q ss_pred eee-cCe--EEEecccc
Q psy10905 173 LPL-GGD--IVTIGRGY 186 (219)
Q Consensus 173 i~l-~g~--l~TiG~Gy 186 (219)
.-- +|. .++..+|+
T Consensus 320 ~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQKS 336 (353)
T ss_dssp EECTTSCEEEEEEECCC
T ss_pred EEcCCCCEEEEEEcccc
Confidence 322 353 44444444
No 101
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.41 E-value=0.46 Score=37.67 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=75.5
Q ss_pred eeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecccc
Q psy10905 27 LWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCSKL 106 (219)
Q Consensus 27 LW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl 106 (219)
|-++..+|+|.+|++.+..+.....+.+.. ..+..++-++ +...+|..-..+..|+.||.++++++.+++...
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~- 76 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAG-----PTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLST- 76 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCT-----TCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCB-
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCC-----CCccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC-
Confidence 446677899999999876655433332210 0122333222 445677777778899999999999998887643
Q ss_pred ccCCCCcccccccccccccCceeeeEeee--cceEEEec------------ceeEEEEEecCcceeeeeecccccceeEE
Q psy10905 107 VPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT------------TWGCIVVAEKDSLRPITVFRPYEELVTAI 172 (219)
Q Consensus 107 ~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT------------twG~iiVaea~tLrPit~frp~e~~V~~I 172 (219)
|.. ....+..+++. +.+||++. .-|.|.+.+..+.+++..+.. ...++.+
T Consensus 77 -~~~--------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~ 140 (337)
T 1pby_B 77 -PEE--------------RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITML 140 (337)
T ss_dssp -TTE--------------EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCE
T ss_pred -ccc--------------ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCccee
Confidence 110 00112344443 46889886 348999999888877655543 3334433
No 102
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.25 E-value=0.97 Score=36.70 Aligned_cols=137 Identities=13% Similarity=0.062 Sum_probs=82.6
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEe-eeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTS-HDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~-~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
|-...++++++=+ ..|=+|..||.|.||++..+.... ...-.|.++ |..++-++...........-+..|+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~------V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGP------VWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSC------EEEEEECCGGGCSEEEEEETTTEEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCC------eEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4444577777654 778899999999999987542221 222234333 5555422111112333445567899
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEecCcce--eeeee
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAEKDSLR--PITVF 162 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVaea~tLr--Pit~f 162 (219)
.||.++++.... .. +.. ....|++++.. +..|..|..-|.|-+-+..+-. ....+
T Consensus 81 iWd~~~~~~~~~-------------~~--~~~----h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 81 IWKEENGRWSQI-------------AV--HAV----HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp EEEBSSSCBCCC-------------EE--ECC----CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred EEEcCCCceEEE-------------EE--eec----CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence 999987642110 00 111 23457888876 3578899999999998865432 23567
Q ss_pred cccccceeEEe
Q psy10905 163 RPYEELVTAIL 173 (219)
Q Consensus 163 rp~e~~V~~Ii 173 (219)
..|...|.++.
T Consensus 142 ~~h~~~v~~~~ 152 (297)
T 2pm7_B 142 DAHAIGVNSAS 152 (297)
T ss_dssp ECCSSCEEEEE
T ss_pred ecccCccceEe
Confidence 78888887764
No 103
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.20 E-value=1.1 Score=42.08 Aligned_cols=121 Identities=17% Similarity=0.278 Sum_probs=71.6
Q ss_pred eeeeeeec-ce-eeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEE-eCCcEEEEEecc
Q psy10905 17 LHAITAVP-GE-LWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYV-YPGCSVYQWDTQ 93 (219)
Q Consensus 17 i~s~a~v~-~e-LW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv-~pg~~Vyqw~~~ 93 (219)
|.+++.-. .. ||.|-.+|.+..|+.+.+.+.............+.-.|..++....+...+|... ..| +|.+|.+
T Consensus 68 I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~g--l~~~~~~ 145 (781)
T 3v9f_A 68 LNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRG--IEYLDIA 145 (781)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSC--EEEEETT
T ss_pred cceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCC--eeEEECC
Confidence 56655443 55 9999766589999988777653311000111233446777763110035699987 344 8899998
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecCc
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKDS 155 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~t 155 (219)
++++.. +...+. + ......|.+|+.. ++.|||||..+-|...+..+
T Consensus 146 ~~~~~~-~~~~~~-~--------------~l~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~ 192 (781)
T 3v9f_A 146 TGKFTH-YNKSTV-P--------------ALPSEQTWTATEAEDGKLYIGHVEGGLSILSLND 192 (781)
T ss_dssp TTEEEE-ESTTTC-T--------------TCSCCCEEEEEEEETTEEEEEETTTEEEEEETTT
T ss_pred CCeEEe-eccCcc-c--------------CCCccceEEEEECCCCCEEEEecCCCeEEEcCCC
Confidence 887643 211100 0 0122457888775 69999999883466666555
No 104
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.17 E-value=0.49 Score=38.81 Aligned_cols=96 Identities=11% Similarity=0.216 Sum_probs=62.9
Q ss_pred cee-eecccCCcEEEEEcc--CCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeee
Q psy10905 25 GEL-WCGESDGNISIYTMS--EHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKL 101 (219)
Q Consensus 25 ~eL-W~G~~~g~Isi~~l~--~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~L 101 (219)
..| |+...+++|.+|+++ ++.++....+....+ ......-|+.. .+..+|.+...|..|+.||.+|++++.++
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~--~~~~p~g~~~d--~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK--EEQIPDGMCID--AEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG--GGCEEEEEEEB--TTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC--CCCCCCeeEEC--CCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 445 566667899999884 445554333333221 11233445532 23369999999999999999999988877
Q ss_pred eccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecce
Q psy10905 102 DCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTW 145 (219)
Q Consensus 102 D~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtw 145 (219)
.. | ..++++++..+ +.|||.|..
T Consensus 237 ~~----p-----------------~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 237 KL----P-----------------VDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EC----S-----------------SSBEEEEEEESGGGCEEEEEEBC
T ss_pred EC----C-----------------CCCceEEEEeCCCCCEEEEEcCC
Confidence 42 2 13578888764 689998864
No 105
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.03 E-value=2.1 Score=39.30 Aligned_cols=154 Identities=13% Similarity=0.076 Sum_probs=96.5
Q ss_pred ceeeeeeeec---ceeeecccCCcEEEEEccCCc----eEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEE
Q psy10905 15 SVLHAITAVP---GELWCGESDGNISIYTMSEHS----VTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSV 87 (219)
Q Consensus 15 ~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~----vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~V 87 (219)
..+.+++.-+ .-|=+|..||.|.||++..+. ........|... |..++-++ +...+- .-.-+..|
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~------v~~v~~s~-~g~~l~-sgs~Dg~v 454 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHF------VEDVVLSS-DGQFAL-SGSWDGEL 454 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSC------EEEEEECT-TSSEEE-EEETTSEE
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCc------EEEEEECC-CCCEEE-EEeCCCcE
Confidence 3467777653 457789999999999998542 222333345433 55554333 333333 33456688
Q ss_pred EEEecccceeeeeeec-------cccccCCCCccccc-----------------ccccccccCceeeeEeeec----ceE
Q psy10905 88 YQWDTQARSIVNKLDC-------SKLVPCSESLQSIC-----------------IEEPLRQDQCHVTSVCILD----TCL 139 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~-------skl~PcSEsl~si~-----------------iee~l~~~~~qVtaL~~~~----~~L 139 (219)
+.||..+++...++.- -.+.|....|-|-+ +.+........|++++... ..|
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 9999988877665421 12234333222221 1111112334588888865 358
Q ss_pred EEecceeEEEEEecCcceeeeeecccccceeEEeeec
Q psy10905 140 YIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPLG 176 (219)
Q Consensus 140 YIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l~ 176 (219)
..|..-|.|.+-|..+.++...++.|.+.|+++.--+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC
Confidence 8888889999999999999999999999999887543
No 106
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.03 E-value=0.62 Score=43.86 Aligned_cols=142 Identities=18% Similarity=0.288 Sum_probs=83.0
Q ss_pred eeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 17 LHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
+.+++.-. ..||.|-.++.|..|+.+...+... +.+...+.-.|..++. .....+|...+- --++.+|.+++
T Consensus 365 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~----~~~~~~~~~~v~~i~~--d~~g~lWigt~~-~Gl~~~~~~~~ 437 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYN----KENRELLSNSVLCSLK--DSEGNLWFGTYL-GNISYYNTRLK 437 (781)
T ss_dssp EEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC---------CCCSBEEEEEE--CTTSCEEEEETT-EEEEEECSSSC
T ss_pred eEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEc----cCCCCCCCcceEEEEE--CCCCCEEEEecc-CCEEEEcCCCC
Confidence 56665544 7899997678899997764433321 1112344556777773 224469998863 35899999988
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecCcceeeeeeccc-----ccce
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKDSLRPITVFRPY-----EELV 169 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~tLrPit~frp~-----e~~V 169 (219)
++..-.. + ......|.+++.. ++.|||||.-| |...+..+-+-.....+- ...|
T Consensus 438 ~~~~~~~-----~--------------~~~~~~v~~i~~d~~g~lwigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i 497 (781)
T 3v9f_A 438 KFQIIEL-----E--------------KNELLDVRVFYEDKNKKIWIGTHAG-VFVIDLASKKVIHHYDTSNSQLLENFV 497 (781)
T ss_dssp EEEECCS-----T--------------TTCCCCEEEEEECTTSEEEEEETTE-EEEEESSSSSCCEEECTTTSSCSCSCE
T ss_pred cEEEecc-----C--------------CCCCCeEEEEEECCCCCEEEEECCc-eEEEeCCCCeEEecccCccccccccee
Confidence 7653210 0 1123457788776 48999999965 666665543221111111 3567
Q ss_pred eEEeeec-Ce--EEEeccc
Q psy10905 170 TAILPLG-GD--IVTIGRG 185 (219)
Q Consensus 170 ~~Ii~l~-g~--l~TiG~G 185 (219)
++|..-. |. +.|-|+|
T Consensus 498 ~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 498 RSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp EEEEECTTCCEEEEESSSC
T ss_pred EEEEEcCCCCEEEEEcCCC
Confidence 7775433 32 6666666
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.01 E-value=1.2 Score=43.70 Aligned_cols=142 Identities=13% Similarity=0.117 Sum_probs=92.4
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEee----------------------------------------eee
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSH----------------------------------------DTV 52 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~----------------------------------------~~l 52 (219)
..+.++|+=+ ..|=+|..+|.|.||+++.+...+. ..+
T Consensus 489 ~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 568 (902)
T 2oaj_A 489 LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPS 568 (902)
T ss_dssp CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEE
T ss_pred CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcccee
Confidence 3467777665 8899999999999999885421100 000
Q ss_pred eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeE
Q psy10905 53 NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSV 132 (219)
Q Consensus 53 ~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL 132 (219)
...+ ..+..|+.|+-++ + +.-..-..+-.|+.||+++++++.+-.|+.+- ......|+++
T Consensus 569 ~~l~--~h~~~V~svafSp-d--G~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~---------------~gh~~~V~sv 628 (902)
T 2oaj_A 569 TAVH--ANKGKTSAINNSN-I--GFVGIAYAAGSLMLIDRRGPAIIYMENIREIS---------------GAQSACVTCI 628 (902)
T ss_dssp EEEC--CCSCSEEEEEECB-T--SEEEEEETTSEEEEEETTTTEEEEEEEGGGTC---------------SSCCCCEEEE
T ss_pred EEEE--cCCCcEEEEEecC-C--cEEEEEeCCCcEEEEECCCCeEEEEeehhHhc---------------cccccceEEE
Confidence 0000 0123455665322 2 22223345668999999999998765543321 1345679999
Q ss_pred eee-----c-----ceEEEecceeEEEEEec---Ccceeeeeecccc-----cceeEEeeec
Q psy10905 133 CIL-----D-----TCLYIGTTWGCIVVAEK---DSLRPITVFRPYE-----ELVTAILPLG 176 (219)
Q Consensus 133 ~~~-----~-----~~LYIGTtwG~iiVaea---~tLrPit~frp~e-----~~V~~Ii~l~ 176 (219)
+.. . ..|..|+.-|.|.+-+- .+=+.+..|.++. +.|-.|.|++
T Consensus 629 ~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~ 690 (902)
T 2oaj_A 629 EFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFS 690 (902)
T ss_dssp EEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEE
T ss_pred EEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEe
Confidence 988 4 48999999999999996 5555667777774 7788888875
No 108
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.97 E-value=0.66 Score=37.11 Aligned_cols=116 Identities=12% Similarity=0.101 Sum_probs=71.3
Q ss_pred ceeee-cccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeec
Q psy10905 25 GELWC-GESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDC 103 (219)
Q Consensus 25 ~eLW~-G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~ 103 (219)
..++. +..+|.|.+|++++..+...-.+ ++. ..+..++-++ +...+|..-..+..|+.||.++++++.+++.
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~----~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDK----FGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEEC--SSC----CSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEec--CCC----CCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 34443 44679999999987665433222 220 0122333222 4456777777788999999999999888775
Q ss_pred cccccCCCCcccccccccccccCceeeeEeee--cceEEEecce------------eEEEEEecCc---ceeeeee
Q psy10905 104 SKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTW------------GCIVVAEKDS---LRPITVF 162 (219)
Q Consensus 104 skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtw------------G~iiVaea~t---LrPit~f 162 (219)
.+. | ......+.+++.. +.+||++..- +.|.+.|..+ .+++..+
T Consensus 84 ~~~-~--------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 84 SSV-P--------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp CCS-T--------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred ccc-c--------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 321 1 0011224455664 4689998865 8999999887 4444444
No 109
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.82 E-value=1.5 Score=36.53 Aligned_cols=135 Identities=12% Similarity=0.136 Sum_probs=86.2
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeee-ccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVN-HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~-h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
...+.+++.-+ ..|=+|..+|.|.||+++.+.......+. |.+ .|..++-.+ +.. .......+..|+.|
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~------~v~~v~~sp-~~~-~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN------EVKSVAWAP-SGN-LLATCSRDKSVWVW 132 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS------CEEEEEECT-TSS-EEEEEETTSCEEEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC------CceEEEEeC-CCC-EEEEEECCCeEEEE
Confidence 34467777665 67889999999999999877655444443 433 356665433 233 33334456679999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCc--ceeeeeecccc
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDS--LRPITVFRPYE 166 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~t--LrPit~frp~e 166 (219)
|..+.+-...+.. +. .....|++++... ..|..|..-|.|-+-+..+ ..++..+..|+
T Consensus 133 d~~~~~~~~~~~~--------------~~----~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~ 194 (345)
T 3fm0_A 133 EVDEEDEYECVSV--------------LN----SHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE 194 (345)
T ss_dssp EECTTSCEEEEEE--------------EC----CCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred ECCCCCCeEEEEE--------------ec----CcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC
Confidence 9877542221110 11 2234577777753 6788888888888877554 35677889999
Q ss_pred cceeEEee
Q psy10905 167 ELVTAILP 174 (219)
Q Consensus 167 ~~V~~Ii~ 174 (219)
+.|.++.-
T Consensus 195 ~~v~~l~~ 202 (345)
T 3fm0_A 195 STVWSLAF 202 (345)
T ss_dssp SCEEEEEE
T ss_pred CceEEEEE
Confidence 99988753
No 110
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.73 E-value=1.7 Score=41.01 Aligned_cols=116 Identities=16% Similarity=0.243 Sum_probs=72.9
Q ss_pred eeeeeeec-ce-eeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP-GE-LWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~-~e-LW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
+++++.-. .. ||+|-..+.|..|+.+.+.+.-. .+.++..+.-.|..++. .....+|...+.| ++.||.++
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~---~~~~~~l~~~~v~~i~~--d~~g~lwigt~~G--l~~~~~~~ 480 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF---NQRNSQLVNENVYAILP--DGEGNLWLGTLSA--LVRFNPEQ 480 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE---CTTTSCCSCSCEEEEEE--CSSSCEEEEESSC--EEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe---ecCCCCcCCCeeEEEEE--CCCCCEEEEecCc--eeEEeCCC
Confidence 56666543 66 99997778899998887665432 22233344556777773 2234599999855 89999999
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecCc
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKDS 155 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~t 155 (219)
++...-... .. .+ ......|.++... ++.|||||.-| |...+..+
T Consensus 481 ~~~~~~~~~-------~~------~~--~~~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~ 526 (795)
T 4a2l_A 481 RSFTTIEKE-------KD------GT--PVVSKQITTLFRDSHKRLWIGGEEG-LSVFKQEG 526 (795)
T ss_dssp TEEEECCBC-------TT------CC--BCCCCCEEEEEECTTCCEEEEESSC-EEEEEEET
T ss_pred CeEEEcccc-------cc------cc--ccCCceEEEEEECCCCCEEEEeCCc-eEEEeCCC
Confidence 876542111 00 00 1123567787765 48899999955 55555443
No 111
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.70 E-value=2 Score=39.44 Aligned_cols=126 Identities=9% Similarity=0.006 Sum_probs=80.1
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCC---CCceEEEEEeCCcEEEEEe
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPS---TSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~---~~~~Vwsyv~pg~~Vyqw~ 91 (219)
.+++++-+ +.|+++..+|.|++|++..........+.+.. ...+++-++. +...+|+.-+-+..|..||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 56555554 88999999999999999322233333444422 3566664331 5667999988778889999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEec-ceeEEEEEecCccee
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT-TWGCIVVAEKDSLRP 158 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT-twG~iiVaea~tLrP 158 (219)
.+|++++.+++....-.-. .+-| ...+|.++... +.++|+.. --|-|.+.+..+...
T Consensus 255 ~~t~~~~~~i~~~g~~~~~-------~~~~---~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~ 314 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDT-------QTYH---PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN 314 (543)
T ss_dssp TTTCCEEEEEECCEECSSS-------CCEE---SCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS
T ss_pred ccccccceeecccCcccCc-------cccc---cCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc
Confidence 9999999988764310000 0111 22367777776 35666543 247788888776543
No 112
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.69 E-value=1.3 Score=35.12 Aligned_cols=97 Identities=8% Similarity=0.104 Sum_probs=62.2
Q ss_pred cEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcc
Q psy10905 35 NISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQ 114 (219)
Q Consensus 35 ~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~ 114 (219)
.|.+|+++...+.....-.|. ..+..++-++ +...+|.. ...|+.||.++++++.+++..+
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~------~~~~~~~~s~-dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~~--------- 280 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMD------VFYFSTAVNP-AKTRAFGA---YNVLESFDLEKNASIKRVPLPH--------- 280 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECS------SCEEEEEECT-TSSEEEEE---ESEEEEEETTTTEEEEEEECSS---------
T ss_pred ceEEEeCCCCCceEeecCCCC------CceeeEEECC-CCCEEEEe---CCeEEEEECCCCcCcceecCCC---------
Confidence 468888887766522221121 1233344333 45567766 5789999999999887765321
Q ss_pred cccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeec
Q psy10905 115 SICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 115 si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~fr 163 (219)
.+.+++.. +.+||++..-|.|.+.|..+.+.+..+.
T Consensus 281 -------------~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 281 -------------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp -------------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred -------------ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 12345554 4689999888999999988887765543
No 113
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.52 E-value=1.8 Score=40.89 Aligned_cols=150 Identities=13% Similarity=0.161 Sum_probs=85.9
Q ss_pred eeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 17 LHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
+.+++.-. ..||.|-.++.+..|+.+.+.+.....-...+...++-.|..+.. .....+|...+-| |+.||.+++
T Consensus 217 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~--d~~g~lWigt~~G--l~~~~~~~~ 292 (795)
T 4a2l_A 217 IQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAM--DSQNRLWIGTFND--LNIYHEGTD 292 (795)
T ss_dssp EEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEE--CTTSCEEEEESSC--EEEEETTTT
T ss_pred eEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEE--cCCCCEEEEeCCh--hheEcCCCC
Confidence 44444333 789999766679999877665543211100012344556888873 2244699999865 889999888
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEEecceeEEEEEecCcceeeeeeccc-------cc
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTTWGCIVVAEKDSLRPITVFRPY-------EE 167 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTtwG~iiVaea~tLrPit~frp~-------e~ 167 (219)
++..-. -.+.-| -+.....|.+|.... +.|||||..|=|...+..+- ....+++. ..
T Consensus 293 ~~~~~~-~~~~~~-------------~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~l~~~ 357 (795)
T 4a2l_A 293 SFASYS-SNPVEN-------------GSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN-RFKNIRNIPYKNSLSDN 357 (795)
T ss_dssp EEEEEC-CCTTST-------------TSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG-SSEEECCCTTSSSCSCS
T ss_pred eEEEEe-cCCCCC-------------CCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc-cceEEcCCCCCCCCCCC
Confidence 765321 110001 122345688888754 89999998766777665432 12223221 23
Q ss_pred ceeEEeeec-Ce--EEEeccc
Q psy10905 168 LVTAILPLG-GD--IVTIGRG 185 (219)
Q Consensus 168 ~V~~Ii~l~-g~--l~TiG~G 185 (219)
.|++|..=. |. +.|-+.|
T Consensus 358 ~V~~i~~d~~g~lWiGt~~~G 378 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWIGTNDGG 378 (795)
T ss_dssp SEEEEEECTTSCEEEEESSSC
T ss_pred eeEEEEECCCCCEEEEECCCC
Confidence 577776543 32 4454445
No 114
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.47 E-value=1.8 Score=35.83 Aligned_cols=152 Identities=17% Similarity=0.111 Sum_probs=90.7
Q ss_pred Cceeeeeee-----e--c-ceeeecccCCcEEEEEccCCce-----E-eeeeeeccCCccccceeEEEeecCCCCceEEE
Q psy10905 14 SSVLHAITA-----V--P-GELWCGESDGNISIYTMSEHSV-----T-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWS 79 (219)
Q Consensus 14 ~~~i~s~a~-----v--~-~eLW~G~~~g~Isi~~l~~~~v-----s-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vws 79 (219)
...+.++++ - + .-|=+|..||.|.||++..+.. . ....-.|.. .|..++-.+ +...+ .
T Consensus 21 ~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~------~V~~~~~~~-~~~~l-~ 92 (343)
T 2xzm_R 21 SDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH------FVSDLALSQ-ENCFA-I 92 (343)
T ss_dssp SSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS------CEEEEEECS-STTEE-E
T ss_pred hhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC------ceEEEEECC-CCCEE-E
Confidence 344677776 2 2 5688999999999999875421 1 111223322 355555333 22222 2
Q ss_pred EEeCCcEEEEEecccceeeeeeec-------cccccCCCCccccc---------ccc-------cccccCceeeeEeeec
Q psy10905 80 YVYPGCSVYQWDTQARSIVNKLDC-------SKLVPCSESLQSIC---------IEE-------PLRQDQCHVTSVCILD 136 (219)
Q Consensus 80 yv~pg~~Vyqw~~~tr~I~~~LD~-------skl~PcSEsl~si~---------iee-------~l~~~~~qVtaL~~~~ 136 (219)
.-.-+..|+.||.++++...++.- -.+-|....|-+-+ ++. ........|++++...
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 334566889999998887665531 12334333222221 110 0012234577777654
Q ss_pred ------------ceEEEecceeEEEEEecCcceeeeeecccccceeEEee
Q psy10905 137 ------------TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILP 174 (219)
Q Consensus 137 ------------~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~ 174 (219)
..|..|..-|.|.+-+ ...+++..|++|++.|.++.-
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEE
Confidence 4688888889999999 566888899999999988754
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.46 E-value=1.7 Score=35.71 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=85.8
Q ss_pred eeCCCceeeeeeeec--cee-eecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcE
Q psy10905 10 ELGASSVLHAITAVP--GEL-WCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCS 86 (219)
Q Consensus 10 elg~~~~i~s~a~v~--~eL-W~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~ 86 (219)
++.....+.++++-+ ..| .+|..+|.|.+|+++.+.+... +.+.. .+..++-.+ +...++..-..+..
T Consensus 27 ~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~--~~~~~------~v~~~~~sp-dg~~l~~~~~~~~~ 97 (391)
T 1l0q_A 27 TIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT--VPAGS------SPQGVAVSP-DGKQVYVTNMASST 97 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE--EECSS------SEEEEEECT-TSSEEEEEETTTTE
T ss_pred EeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE--EECCC------CccceEECC-CCCEEEEEECCCCE
Confidence 333333356666655 456 4666889999999987655432 33322 355565433 45567777777789
Q ss_pred EEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEE-EecceeEEEEEecCcceeeeeec
Q psy10905 87 VYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLY-IGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LY-IGTtwG~iiVaea~tLrPit~fr 163 (219)
|+.||.+++++...+... ..+.+++... ..|| .+..-|.|.+.|..+-+++..+.
T Consensus 98 v~v~d~~~~~~~~~~~~~----------------------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVKTG----------------------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp EEEEETTTTEEEEEEECS----------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEeCC----------------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 999999999887665421 1345666653 4675 55557899999999988888877
Q ss_pred ccccceeEE
Q psy10905 164 PYEELVTAI 172 (219)
Q Consensus 164 p~e~~V~~I 172 (219)
... .+..+
T Consensus 156 ~~~-~~~~~ 163 (391)
T 1l0q_A 156 VGR-SPKGI 163 (391)
T ss_dssp CCS-SEEEE
T ss_pred cCC-CcceE
Confidence 653 44444
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.46 E-value=1.7 Score=39.93 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=69.6
Q ss_pred ecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec--ccceeeeeeecccc
Q psy10905 29 CGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT--QARSIVNKLDCSKL 106 (219)
Q Consensus 29 ~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~--~tr~I~~~LD~skl 106 (219)
++..+|.|++|+.....+...-.+-| .+..++.++ +...+|+.-+- -.|+.||. +|++++.++....
T Consensus 154 s~~~d~~V~v~D~~t~~~~~~i~~g~--------~~~~v~~sp-dg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~~g~- 222 (543)
T 1nir_A 154 TLRDAGQIALVDGDSKKIVKVIDTGY--------AVHISRMSA-SGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIKIGI- 222 (543)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECST--------TEEEEEECT-TSCEEEEEETT-SEEEEEETTSSSCEEEEEEECCS-
T ss_pred EEcCCCeEEEEECCCceEEEEEecCc--------ccceEEECC-CCCEEEEECCC-CeEEEEECcCCCCcEEEEEecCC-
Confidence 45567899999988766653332212 133343333 56678877654 88999999 8888877764211
Q ss_pred ccCCCCcccccccccccccCceeeeEeee------cceEEEecce-eEEEEEecCcceeeeeec
Q psy10905 107 VPCSESLQSICIEEPLRQDQCHVTSVCIL------DTCLYIGTTW-GCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 107 ~PcSEsl~si~iee~l~~~~~qVtaL~~~------~~~LYIGTtw-G~iiVaea~tLrPit~fr 163 (219)
.+..+++. +.+||++..+ |-|.|.|..+++|+..+.
T Consensus 223 ---------------------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 223 ---------------------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp ---------------------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred ---------------------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 12344443 5789999865 889999999999988775
No 117
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.36 E-value=0.98 Score=37.14 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=80.5
Q ss_pred CCCceeeeeeeec--ceeeecccCCcEEEEEccCCceEe-eeeeeccCCccccceeEEEeecC-CCCceEEEEEeCCcEE
Q psy10905 12 GASSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTS-HDTVNHFHPVISNVDVSFLVSSP-STSAWVWSYVYPGCSV 87 (219)
Q Consensus 12 g~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~-~~~l~h~~~~~~~~~V~~L~~~~-~~~~~Vwsyv~pg~~V 87 (219)
|-...+.++++=+ ..|=+|..||.|.||+++++.... ...-.|..+ |..++-.+ .+...+-+ ..-+..|
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~------V~~v~~~~~~~~~~l~s-~s~D~~v 83 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGP------VWQVAWAHPMYGNILAS-CSYDRKV 83 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSC------EEEEEECCGGGSSCEEE-EETTSCE
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCcc------EEEEEeCCCCCCCEEEE-EECCCEE
Confidence 3344567777655 778899999999999998764332 222245443 55554321 12233333 3456679
Q ss_pred EEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec----ceEEEecceeEEEEEecCc---ceeee
Q psy10905 88 YQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD----TCLYIGTTWGCIVVAEKDS---LRPIT 160 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~----~~LYIGTtwG~iiVaea~t---LrPit 160 (219)
+.||.++++..... .+.. -...|++++... ..|..|..-|.|.+-+..+ ..+..
T Consensus 84 ~iWd~~~~~~~~~~---------------~~~~----h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~ 144 (316)
T 3bg1_A 84 IIWREENGTWEKSH---------------EHAG----HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK 144 (316)
T ss_dssp EEECCSSSCCCEEE---------------EECC----CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC
T ss_pred EEEECCCCcceEEE---------------EccC----CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee
Confidence 99999876421110 1122 234577887753 4688888888888877554 34456
Q ss_pred eecccccceeEE
Q psy10905 161 VFRPYEELVTAI 172 (219)
Q Consensus 161 ~frp~e~~V~~I 172 (219)
.+..|...|.++
T Consensus 145 ~~~~h~~~v~~~ 156 (316)
T 3bg1_A 145 INNAHTIGCNAV 156 (316)
T ss_dssp BTTSSSSCBCCC
T ss_pred eeccccCCcceE
Confidence 667777777654
No 118
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.34 E-value=2 Score=36.43 Aligned_cols=150 Identities=8% Similarity=0.037 Sum_probs=84.1
Q ss_pred EeeCCCceeeeeeeec-ceeeecccCCcEEEEEccCCceEeee-eeeccCCccccceeEEEeecCCCCceEEEEEeCC--
Q psy10905 9 TELGASSVLHAITAVP-GELWCGESDGNISIYTMSEHSVTSHD-TVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG-- 84 (219)
Q Consensus 9 telg~~~~i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~-~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg-- 84 (219)
.+++...++.++++=+ .++-+..+++.+.+|....+...... ...| +..|+.++-.+ +...+.+.-..+
T Consensus 171 ~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~v~fsp-dg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 171 FEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDK------NWSLSKINFIA-DDTVLIAASLKKGK 243 (365)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCT------TEEEEEEEEEE-TTEEEEEEEESSSC
T ss_pred EEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCC------CCCEEEEEEcC-CCCEEEEEecCCcc
Confidence 3444444466666554 23333335677777766654333221 1222 22344443222 333333333333
Q ss_pred -cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeee
Q psy10905 85 -CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITV 161 (219)
Q Consensus 85 -~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~ 161 (219)
..++.|+..+.+..... ...+.. ....|++|+... ..|..|..=|-|-+-|..+.+|+..
T Consensus 244 ~~~i~~~~~~~~~~~~~~-------------~~~~~~----~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLR-------------SKQVTN----RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI 306 (365)
T ss_dssp CEEEEEEEEETTEEEEEE-------------EEEEES----SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eeEEeecccccceeccee-------------eeeecC----CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE
Confidence 36777877665432110 111222 344588888865 6788898999999999999999976
Q ss_pred e-cccccceeEEeee-cC-eEEEe
Q psy10905 162 F-RPYEELVTAILPL-GG-DIVTI 182 (219)
Q Consensus 162 f-rp~e~~V~~Ii~l-~g-~l~Ti 182 (219)
| +.|.+.|+++.=- +| .|+|.
T Consensus 307 ~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 307 FKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp ETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ecCcccCCEEEEEECCCCCEEEEE
Confidence 5 7899999987532 34 24443
No 119
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.18 E-value=3.2 Score=37.69 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=90.0
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
.+.++++-+ .-|-+|..+|.|.+|+++...+.......|..+ |..++-++ +...+- .-..+..|+.||.+
T Consensus 450 ~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~------v~~v~fsp-dg~~la-s~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 450 NSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE------ITSVAFSN-NGAFLV-ATDQSRKVIPYSVA 521 (611)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSC------EEEEEECT-TSSEEE-EEETTSCEEEEEGG
T ss_pred CceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCc------eEEEEECC-CCCEEE-EEcCCCCEEEEEcC
Confidence 345565554 778899999999999998766543333566544 66665444 333333 33456678999998
Q ss_pred c-ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcce-e-eeeeccc-cc
Q psy10905 94 A-RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLR-P-ITVFRPY-EE 167 (219)
Q Consensus 94 t-r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLr-P-it~frp~-e~ 167 (219)
+ +++.... + . ..-...|++++... .+|.-|..=|.|.+=+..+-. + +.++..| .+
T Consensus 522 ~~~~~~~~~----~-----------~----~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~ 582 (611)
T 1nr0_A 522 NNFELAHTN----S-----------W----TFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS 582 (611)
T ss_dssp GTTEESCCC----C-----------C----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTS
T ss_pred CCCceeeee----e-----------e----eecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCccc
Confidence 7 5443210 0 0 11245688888865 467777778889988876542 3 3678888 88
Q ss_pred ceeEEeeec-CeEEEec
Q psy10905 168 LVTAILPLG-GDIVTIG 183 (219)
Q Consensus 168 ~V~~Ii~l~-g~l~TiG 183 (219)
.|.++.-.+ |.|+|.|
T Consensus 583 ~v~~v~fs~d~~l~s~~ 599 (611)
T 1nr0_A 583 SVNSVIWLNETTIVSAG 599 (611)
T ss_dssp CEEEEEEEETTEEEEEE
T ss_pred CeeEEEEcCCCEEEEec
Confidence 888876443 4455544
No 120
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.13 E-value=1.4 Score=38.01 Aligned_cols=136 Identities=8% Similarity=0.051 Sum_probs=82.7
Q ss_pred eeeeeec-ceeeecc---cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 18 HAITAVP-GELWCGE---SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 18 ~s~a~v~-~eLW~G~---~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
+.+++-+ ..||.+. .+++|.+++++.+.+.....+. +. ....-++ -+...+|......-.|+.+|.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~--~~----~fgeGi~---~~g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD--DS----YFGEGLT---LLNEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC--TT----CCEEEEE---EETTEEEEEETTCSEEEEEETT
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC--CC----cceEEEE---EeCCEEEEEEecCCEEEEEECC
Confidence 5677666 7899863 3589999999988777554441 11 1112233 2345799999999999999999
Q ss_pred cceeeeeeecc-----cccc---------CCCCcccccccccccccCc----------eeeeEeeecceEEEecc-eeEE
Q psy10905 94 ARSIVNKLDCS-----KLVP---------CSESLQSICIEEPLRQDQC----------HVTSVCILDTCLYIGTT-WGCI 148 (219)
Q Consensus 94 tr~I~~~LD~s-----kl~P---------cSEsl~si~iee~l~~~~~----------qVtaL~~~~~~LYIGTt-wG~i 148 (219)
|++++.++..- .|-| .|.+|.-||-+.+--...- +...|...+++||+..- .+.|
T Consensus 95 t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 95 TLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCI 174 (266)
T ss_dssp TTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEE
T ss_pred CCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeE
Confidence 99999999765 1222 3334444442211001111 23345555667776652 4677
Q ss_pred EEEecCcceeeeee
Q psy10905 149 VVAEKDSLRPITVF 162 (219)
Q Consensus 149 iVaea~tLrPit~f 162 (219)
.|.|..|.+.+..+
T Consensus 175 ~vID~~tg~V~~~I 188 (266)
T 2iwa_A 175 ARISAKDGTLLGWI 188 (266)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 77777776655443
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.13 E-value=0.92 Score=38.17 Aligned_cols=119 Identities=9% Similarity=-0.022 Sum_probs=69.7
Q ss_pred eecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc-eeeeeeecccc
Q psy10905 28 WCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR-SIVNKLDCSKL 106 (219)
Q Consensus 28 W~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr-~I~~~LD~skl 106 (219)
-+|..++.|.||+++.+.... .+.|.. +|..+.. +.+....+. +..|+.||..+. +.+.+++-
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~--~~~~~~------~v~~v~~---~~~~~~~~~--~~~i~i~d~~~~~~~~~~~~~--- 138 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVS--RIKVDA------PVKDLFL---SREFIVVSY--GDVISVFKFGNPWKRITDDIR--- 138 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEE--EEECSS------CEEEEEE---CSSEEEEEE--TTEEEEEESSTTCCBSSCCEE---
T ss_pred EEECCccEEEEEECCCCcEEE--EEECCC------ceEEEEE---cCCEEEEEE--cCEEEEEECCCCceeeEEecc---
Confidence 567777899999888664432 233433 3444542 223333332 557889998876 54444432
Q ss_pred ccCCCCcccccccccccccCceeeeEeeecceEEE--ecceeEEEEEecCcc---------------ee-eeeecccccc
Q psy10905 107 VPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYI--GTTWGCIVVAEKDSL---------------RP-ITVFRPYEEL 168 (219)
Q Consensus 107 ~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYI--GTtwG~iiVaea~tL---------------rP-it~frp~e~~ 168 (219)
| ..+.+++. ..|-+ |..-|.|-+-|..+. +| +..++.|.+.
T Consensus 139 -~------------------~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~ 197 (355)
T 3vu4_A 139 -F------------------GGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP 197 (355)
T ss_dssp -E------------------EEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC
T ss_pred -C------------------CceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc
Confidence 1 01122222 44444 788899999887654 47 8999999999
Q ss_pred eeEEeeec-C-eEEEec
Q psy10905 169 VTAILPLG-G-DIVTIG 183 (219)
Q Consensus 169 V~~Ii~l~-g-~l~TiG 183 (219)
|+++.--+ | .|+|.+
T Consensus 198 v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCS 214 (355)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCEEEEEe
Confidence 99886432 3 245544
No 122
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.11 E-value=1.6 Score=36.76 Aligned_cols=122 Identities=14% Similarity=0.175 Sum_probs=72.8
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCC-ccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHP-VISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~-~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
.+.+++.-+ ..|-+|..||.|.||+++.+....... .|++. ......|+.++-++ +...+.+ -..+-.|+.||.
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~-~g~~l~~-g~~dg~i~vwd~ 327 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN-REPDRNDNELPIVTSVAFSI-SGRLLFA-GYSNGDCYVWDT 327 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC-CCCSSSCCSSCSCSEEEECS-SSSEEEE-ECTTSCEEEEET
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec-ccccccccccCceEEEEECC-CCCEEEE-EECCCCEEEEEC
Confidence 356666665 789999999999999999764332111 11111 01111244454333 3333444 345668999999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcce
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLR 157 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLr 157 (219)
.+++...++.-.. ..-...|++|+... ..|..|..=|.|-+=+-..-|
T Consensus 328 ~~~~~~~~~~~~~-----------------~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 328 LLAEMVLNLGTLQ-----------------NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp TTCCEEEEECCSC-----------------SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCceEEEEeccc-----------------CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 9888776553210 12345688888864 567777777777776654433
No 123
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.72 E-value=1.5 Score=35.03 Aligned_cols=69 Identities=10% Similarity=0.203 Sum_probs=43.0
Q ss_pred ceeeecccC------------CcEEEEEccCCceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 25 GELWCGESD------------GNISIYTMSEHSVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 25 ~eLW~G~~~------------g~Isi~~l~~~~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..|.++..+ +.|.+|+++++.+. ......++. .+..++-++ +.. +|.. +..|+.||
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~------~~~~~~~s~-dg~-l~~~---~~~i~~~d 172 (349)
T 1jmx_B 104 KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR------QVYLMRAAD-DGS-LYVA---GPDIYKMD 172 (349)
T ss_dssp SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS------SCCCEEECT-TSC-EEEE---SSSEEEEC
T ss_pred CEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC------cccceeECC-CCc-EEEc---cCcEEEEe
Confidence 678888755 89999998864322 223333322 133343222 333 6552 44599999
Q ss_pred cccceeeeeeecc
Q psy10905 92 TQARSIVNKLDCS 104 (219)
Q Consensus 92 ~~tr~I~~~LD~s 104 (219)
.++++++.++...
T Consensus 173 ~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 173 VKTGKYTVALPLR 185 (349)
T ss_dssp TTTCCEEEEECST
T ss_pred CCCCceecccccc
Confidence 9999998887654
No 124
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.67 E-value=3.3 Score=36.04 Aligned_cols=136 Identities=11% Similarity=0.137 Sum_probs=87.4
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
..+.++++-+ ..|=+|..+|.|.+|++....+. ....|.. .|..++-++ +.. .......+..|+.||.
T Consensus 427 ~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~--~~~~~~~------~v~~~~~sp-d~~-~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQ--TLTGHSS------SVRGVAFSP-DGQ-TIASASDDKTVKLWNR 496 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEE--EEECCSS------CEEEEEECT-TSC-EEEEEETTSEEEEEET
T ss_pred CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEE--EEcCCCC------CEEEEEEcC-CCC-EEEEEeCCCEEEEEcC
Confidence 3456666654 67778888999999987654332 2223433 366665433 333 3333455678999995
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeeccccccee
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVT 170 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~ 170 (219)
+++...++. . -...|++|+... .+|..|..-|.|-+-|. +-+++..++.|.+.|.
T Consensus 497 -~~~~~~~~~-----------------~----h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~ 553 (577)
T 2ymu_A 497 -NGQLLQTLT-----------------G----HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 553 (577)
T ss_dssp -TSCEEEEEE-----------------C----CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEE
T ss_pred -CCCEEEEEe-----------------C----CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEE
Confidence 444433332 1 234588888764 67888888899999885 5588899999999999
Q ss_pred EEeeec-C-eEEEec
Q psy10905 171 AILPLG-G-DIVTIG 183 (219)
Q Consensus 171 ~Ii~l~-g-~l~TiG 183 (219)
++.--+ | .|+|.|
T Consensus 554 ~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 554 GVAFSPDGQTIASAS 568 (577)
T ss_dssp EEEECTTSSCEEEEE
T ss_pred EEEEcCCCCEEEEEe
Confidence 875432 4 266654
No 125
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.41 E-value=1.7 Score=39.98 Aligned_cols=133 Identities=11% Similarity=0.086 Sum_probs=80.5
Q ss_pred eeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEe-ecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLV-SSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~-~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
+.+++.-+ ..|-+|..||.|.+|+++.........-.|.. .|..++ +-+.+.........-+-.|..||..+
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~------~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS------YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSS------CEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccc------cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 56666544 67999999999999999854221111223433 355552 11122213555566778999999988
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec-c-eEEEecceeEEEEEecCcceeeeeecccccceeEE
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-T-CLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAI 172 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~-~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~I 172 (219)
.+....+. .|. ....|.+++... . .+..|..-+-|-+-+..+.+.+..+..|.+.|.+|
T Consensus 343 ~~~~~~~~-----------------~~~--~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sv 403 (524)
T 2j04_B 343 IATTKTTV-----------------SRF--RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp HHHHCEEE-----------------EEC--SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred CCcccccc-----------------ccc--ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEE
Confidence 76433221 111 112255566654 2 33344455567788877777777888999999987
Q ss_pred ee
Q psy10905 173 LP 174 (219)
Q Consensus 173 i~ 174 (219)
--
T Consensus 404 a~ 405 (524)
T 2j04_B 404 GV 405 (524)
T ss_dssp EC
T ss_pred Ee
Confidence 63
No 126
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.33 E-value=0.6 Score=37.50 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=62.5
Q ss_pred eeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 17 LHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
+.+++.-. -.||.|-.+|.|..|+.+. ....... ...+ . ...++. .....+|.....| .||.+|. ++
T Consensus 217 ~~~~~~~~~g~l~v~t~~~gl~~~~~~g-~~~~~~~--~~~~-~----~~~~~~--~~~g~l~v~t~~g-gl~~~d~-~g 284 (330)
T 3hxj_A 217 VTRPAISEDGTIYVTSLDGHLYAINPDG-TEKWRFK--TGKR-I----ESSPVI--GNTDTIYFGSYDG-HLYAINP-DG 284 (330)
T ss_dssp CSCCEECTTSCEEEEETTTEEEEECTTS-CEEEEEE--CSSC-C----CSCCEE--CTTSCEEEECTTC-EEEEECT-TS
T ss_pred eeceEECCCCeEEEEcCCCeEEEECCCC-CEeEEee--CCCC-c----cccceE--cCCCeEEEecCCC-CEEEECC-CC
Confidence 34444443 5899998889999985433 3222221 1111 1 111221 2244699887754 6888996 66
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEee-ecceEEEecceeEEEEEecC
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI-LDTCLYIGTTWGCIVVAEKD 154 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~-~~~~LYIGTtwG~iiVaea~ 154 (219)
+...+.+.. ...+.++.. .+++|||||..|.+.+....
T Consensus 285 ~~~~~~~~~---------------------~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 285 TEKWNFETG---------------------SWIIATPVIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp CEEEEEECS---------------------SCCCSCCEECTTCCEEEECTTSCEEEEEC-
T ss_pred cEEEEEEcC---------------------CccccceEEcCCCEEEEEcCCCeEEEEecc
Confidence 666555421 123456666 56899999999988876644
No 127
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.23 E-value=3.2 Score=34.67 Aligned_cols=120 Identities=7% Similarity=0.132 Sum_probs=78.1
Q ss_pred eeeeeecceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce
Q psy10905 18 HAITAVPGELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS 96 (219)
Q Consensus 18 ~s~a~v~~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~ 96 (219)
+.+++-+..||.... +|+|.|++.+...+...- .... ....++.. ....+|..-.-+-.|+.||.+|++
T Consensus 47 ~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i--~~~~------~p~~i~~~--~~g~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI--TGFT------SPRYIHFL--SDEKAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp EEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE--ECCS------SEEEEEEE--ETTEEEEEEBSCSEEEEEETTTTE
T ss_pred eEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc--CCCC------CCcEEEEe--CCCeEEEEECCCCeEEEEECCCCe
Confidence 455554578888755 588999998876654322 2222 23455532 223688777557899999999999
Q ss_pred eeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecc--eeEEEEEecCcceeeeeec
Q psy10905 97 IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT--WGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 97 I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt--wG~iiVaea~tLrPit~fr 163 (219)
++.++..-+- . ....+...|++.++.|||... -+-|.|.|..+.+.+..+.
T Consensus 117 ~~~~i~~g~~---~-------------~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 117 ITGYIECPDM---D-------------MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp EEEEEECTTC---C-------------TTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCc---c-------------ccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 9988765431 0 011123356667899999963 5789999988876655443
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.09 E-value=2.7 Score=33.31 Aligned_cols=110 Identities=12% Similarity=0.140 Sum_probs=66.1
Q ss_pred eeeeeeec--ceeeecccC-CcEEEEEcc--CCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 17 LHAITAVP--GELWCGESD-GNISIYTMS--EHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~-g~Isi~~l~--~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..++++-+ ..|+++..+ |.|.+|+++ .+.+.....+.... .+..++-++ +...+|..-+.+..|+.||
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~-dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG------SLTHISTDH-QGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS------CCSEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC------CCcEEEEcC-CCCEEEEEecCCCeEEEEE
Confidence 34555444 568888776 999999998 55555444443322 233444333 5556888888788899999
Q ss_pred c---ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEec-ceeEEEEEecCc
Q psy10905 92 T---QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT-TWGCIVVAEKDS 155 (219)
Q Consensus 92 ~---~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT-twG~iiVaea~t 155 (219)
. .++++...++.. .++.+++.. +.+||++. .-|.|.+.+..+
T Consensus 113 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGL----------------------DGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EETTEEEEEEEEECCC----------------------TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCccccccccccCC----------------------CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 9 444444433211 123444444 35788876 667787766443
No 129
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.99 E-value=5.4 Score=36.55 Aligned_cols=132 Identities=12% Similarity=0.091 Sum_probs=84.8
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceE-eeee-eeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVT-SHDT-VNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs-~~~~-l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
...+.+++.-+ ..|-+|..||.|.||++...... .... -.|. ..|..+.-.+.........-..+..|+.
T Consensus 472 ~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 472 TKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHR------DWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCS------SCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCC------CcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 34466766655 77899999999999987644221 1110 1122 2355565433332233444455678999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeeccccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPYEE 167 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~e~ 167 (219)
||..+++....+. . -...|++++... ..|..|..-|.|.+-|..+-+++..+.. ..
T Consensus 546 wd~~~~~~~~~~~-----------------~----h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~ 603 (694)
T 3dm0_A 546 WNLSNCKLRSTLA-----------------G----HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NS 603 (694)
T ss_dssp EETTTCCEEEEEC-----------------C----CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SS
T ss_pred EECCCCcEEEEEc-----------------C----CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CC
Confidence 9998877654432 2 234688888864 6788888889999999998888877654 44
Q ss_pred ceeEEe
Q psy10905 168 LVTAIL 173 (219)
Q Consensus 168 ~V~~Ii 173 (219)
.|+++.
T Consensus 604 ~v~~~~ 609 (694)
T 3dm0_A 604 VIHALC 609 (694)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 566654
No 130
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.92 E-value=4.5 Score=37.85 Aligned_cols=132 Identities=14% Similarity=0.270 Sum_probs=74.1
Q ss_pred eeeeeeecceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce
Q psy10905 17 LHAITAVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS 96 (219)
Q Consensus 17 i~s~a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~ 96 (219)
+.+++.-+..||.|-. +.+..|+.+.+.+.... ..++..+.-.|..++. .....+|.....| ++.++..+++
T Consensus 105 i~~i~~~~g~lWigt~-~Gl~~~~~~~~~~~~~~---~~~~~l~~~~i~~i~~--d~~g~lWigt~~G--l~~~~~~~~~ 176 (758)
T 3ott_A 105 VRTMALQGDTLWLGAL-NGLYTYQLQSRKLTSFD---TRRNGLPNNTIYSIIR--TKDNQIYVGTYNG--LCRYIPSNGK 176 (758)
T ss_dssp EEEEEEETTEEEEEET-TEEEEEETTTCCEEEEC---HHHHCCSCSCEEEEEE--CTTCCEEEEETTE--EEEEETTTTE
T ss_pred EEEEEecCCcEEEEcC-CcceeEeCCCCeEEEec---cCCCCcCCCeEEEEEE--cCCCCEEEEeCCC--HhhCccCCCc
Confidence 5555433478999954 57888877766554321 1111233445777762 2244699998755 8899988877
Q ss_pred eeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCc--ceeeeeecccccceeEE
Q psy10905 97 IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDS--LRPITVFRPYEELVTAI 172 (219)
Q Consensus 97 I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~t--LrPit~frp~e~~V~~I 172 (219)
... +. .|... ......|.+|.... +.|||||.-| |...+..+ ++++..+ -...|++|
T Consensus 177 ~~~-~~----~~~~~-----------~~~~~~i~~i~~d~~~~~lWigt~~G-l~~~~~~~~~~~~~~~l--~~~~i~~i 237 (758)
T 3ott_A 177 FEG-IP----LPVHS-----------SQSNLFVNSLLEDTTRQCVWIGTEGY-LFQYFPSTGQIKQTEAF--HNNSIKSL 237 (758)
T ss_dssp EEE-EC----CCCCT-----------TCSSCCEEEEEEETTTTEEEEEEEEE-EEEEETTTTEEEEEEEE--EEEEEEEE
T ss_pred eEE-ec----CCCcc-----------ccccceeEEEEEECCCCEEEEEECCC-CeEEcCCCCeEEeccCC--CCCeEEEE
Confidence 642 11 12111 11234578888764 4699999655 55566443 3333211 12346666
Q ss_pred eee
Q psy10905 173 LPL 175 (219)
Q Consensus 173 i~l 175 (219)
..-
T Consensus 238 ~~d 240 (758)
T 3ott_A 238 ALD 240 (758)
T ss_dssp EEC
T ss_pred EEc
Confidence 654
No 131
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.75 E-value=1.3 Score=38.02 Aligned_cols=122 Identities=15% Similarity=0.152 Sum_probs=75.7
Q ss_pred eeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 18 HAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
.++++-+ .-|-+|..+|.|.+|+++...+.. .-.|. ..|..++-.+. ...+...-..+..|+.||..+.
T Consensus 213 ~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~--~~~h~------~~v~~v~~~p~-~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 213 CSLDVSASSRMVVTGDNVGNVILLNMDGKELWN--LRMHK------KKVTHVALNPC-CDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp CCEEEETTTTEEEEECSSSBEEEEESSSCBCCC--SBCCS------SCEEEEEECTT-CSSEEEEEETTSBCCEEETTTC
T ss_pred EEEEECCCCCEEEEEeCCCcEeeeccCcceeEE--Eeccc------ceEEeeeecCC-CceEEEEecCcceeeEEecccc
Confidence 4444444 678999999999999987543321 11232 24666654442 2334444456677899998776
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccc
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYE 166 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e 166 (219)
+-...+-.. ..-...|++++.. +.+|..|..-|.|-+-+..+......+.+|.
T Consensus 284 ~~~~~~~~~------------------~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 284 RGKASFLYS------------------LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp CSSSCCSBC------------------CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred cccceEEEe------------------eeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 533222111 1223457888775 4678888888999999988776666555554
No 132
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.59 E-value=1 Score=39.37 Aligned_cols=36 Identities=8% Similarity=0.223 Sum_probs=33.1
Q ss_pred eEEEEEeCCcEEEEEecccceeeeeeeccccccCCC
Q psy10905 76 WVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSE 111 (219)
Q Consensus 76 ~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSE 111 (219)
.+|..++..-.|++-|.+|++++.++|++.|.|-.+
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~ 218 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAG 218 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSC
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccc
Confidence 599999999999999999999999999999888553
No 133
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.45 E-value=0.54 Score=41.43 Aligned_cols=80 Identities=14% Similarity=0.240 Sum_probs=53.7
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeee-ccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeec
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVN-HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDC 103 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~-h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~ 103 (219)
..||...-.++|.+++..+..+...-.+. ++.+ .. .+..|.- .+. .+|..++.+-.|++-|.+|++++.++|+
T Consensus 146 ~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~-v~--~lNeLe~--~dG-~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 146 GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP-VE--LINELEC--ANG-VIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp TEEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CC--CEEEEEE--ETT-EEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc-cc--cccccEE--eCC-EEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 67888776777777766654444333332 1111 11 2233321 133 5999999999999999999999999999
Q ss_pred cccccCC
Q psy10905 104 SKLVPCS 110 (219)
Q Consensus 104 skl~PcS 110 (219)
+.|.|-.
T Consensus 220 ~~L~~~~ 226 (268)
T 3nok_A 220 SALTRAV 226 (268)
T ss_dssp HHHHHHH
T ss_pred CCCcccc
Confidence 9887744
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.35 E-value=4.4 Score=35.79 Aligned_cols=133 Identities=19% Similarity=0.140 Sum_probs=79.3
Q ss_pred ceeeeeeeec--ceee----ecccCCcEEEEEccCC---------ceEeeeee-eccCCccccceeEEEeecCCCCceEE
Q psy10905 15 SVLHAITAVP--GELW----CGESDGNISIYTMSEH---------SVTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVW 78 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW----~G~~~g~Isi~~l~~~---------~vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vw 78 (219)
..+.+++.=+ ..|= .|..+|.|.||++++. .+.....+ .|. ..|..++-.+.... ..
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~------~~V~~v~~~p~~~~-~l 165 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG------GMVIDMKWNPTVPS-MV 165 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG------GSEEEEEECSSCTT-EE
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC------CceEEEEECCCCCC-EE
Confidence 3456666554 6677 6888999999998743 11111111 132 34666764443233 44
Q ss_pred EEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcc
Q psy10905 79 SYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSL 156 (219)
Q Consensus 79 syv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tL 156 (219)
....-+-.|+.||..+++...... + ....|++++.. +.+|++|..-|.|.+-|.. .
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~-----~----------------~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~ 223 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATL-----P----------------STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-L 223 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEE-----C----------------GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-C
T ss_pred EEEECCCeEEEEEcCCCcceeecc-----C----------------CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-C
Confidence 445557789999999874322111 1 13457788775 5899999999999999976 3
Q ss_pred eeeeeeccc---c----cceeEEeeec
Q psy10905 157 RPITVFRPY---E----ELVTAILPLG 176 (219)
Q Consensus 157 rPit~frp~---e----~~V~~Ii~l~ 176 (219)
.+...+..+ + ..|.+|...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 224 QEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp CEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred cccccccCCcccCCCCceeEEEEEEec
Confidence 333333221 1 2566666554
No 135
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=92.23 E-value=4.9 Score=34.28 Aligned_cols=122 Identities=11% Similarity=0.133 Sum_probs=75.2
Q ss_pred eeeecccCCcEEEEEccCCceEeeeeeeccCC------ccccceeEEEeecCCCCceEEEEEeC----------CcEEEE
Q psy10905 26 ELWCGESDGNISIYTMSEHSVTSHDTVNHFHP------VISNVDVSFLVSSPSTSAWVWSYVYP----------GCSVYQ 89 (219)
Q Consensus 26 eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~------~~~~~~V~~L~~~~~~~~~Vwsyv~p----------g~~Vyq 89 (219)
.+|..-.+|+++++++..+.+.......-..+ ..|.. ..+++.. .+...+|....| +..|+.
T Consensus 213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g-~~~~a~~-~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG-YNLVGLH-RASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC-SSCEEEE-TTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCC-eeEEEEe-cCCCeEEEEEccCCCcccccCCCceEEE
Confidence 33333346788888887665443332221110 00111 0112322 355678887762 458999
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEee--ecceEEEecceeEEEEEecCcc--eeeeeeccc
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--LDTCLYIGTTWGCIVVAEKDSL--RPITVFRPY 165 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~~~~LYIGTtwG~iiVaea~tL--rPit~frp~ 165 (219)
||.+|+|++.++..-+ | .++++ .+..||++-- |.|-|.|+.+. +++..+.+.
T Consensus 291 iD~~t~~~v~~i~~~~--p---------------------~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~ 346 (361)
T 2oiz_A 291 MDTKTKQRVARIPGRD--A---------------------LSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA 346 (361)
T ss_dssp EETTTTEEEEEEECTT--C---------------------CEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS
T ss_pred EECCCCcEEEEEecCC--e---------------------eEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC
Confidence 9999999999986554 3 24444 3578888775 99999999988 998777666
Q ss_pred ccceeEEe
Q psy10905 166 EELVTAIL 173 (219)
Q Consensus 166 e~~V~~Ii 173 (219)
-+.-+.|.
T Consensus 347 G~~P~~~~ 354 (361)
T 2oiz_A 347 AEASLQVQ 354 (361)
T ss_dssp CSSEEEEE
T ss_pred CCCcEEEE
Confidence 66555554
No 136
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.98 E-value=4.4 Score=33.20 Aligned_cols=130 Identities=12% Similarity=0.124 Sum_probs=84.4
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCC----CceEEEEEeCCcEE
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPST----SAWVWSYVYPGCSV 87 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~----~~~Vwsyv~pg~~V 87 (219)
...+.++++-+ ..|-+|..||.|.||+++...+. ....|.+. |..+...+.. .......-..+..|
T Consensus 107 ~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~--~~~~h~~~------v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 107 KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLA--TLLGHNDW------VSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEE--EECCCSSC------EEEEEECCC------CCEEEEEETTSCE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE--EEeccCCc------EEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 34466666655 67889999999999999865433 22344333 3333321111 11133334456679
Q ss_pred EEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceeeeeeccc
Q psy10905 88 YQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPITVFRPY 165 (219)
Q Consensus 88 yqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPit~frp~ 165 (219)
+.||.++.++..++. .-...|++|+... .+|..|..-|.|.+-|..+.+++..+...
T Consensus 179 ~~wd~~~~~~~~~~~---------------------~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 237 (319)
T 3frx_A 179 KAWNLNQFQIEADFI---------------------GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 237 (319)
T ss_dssp EEEETTTTEEEEEEC---------------------CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred EEEECCcchhheeec---------------------CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 999999887665431 1234578888764 57888888899999999999998888764
Q ss_pred ccceeEEe
Q psy10905 166 EELVTAIL 173 (219)
Q Consensus 166 e~~V~~Ii 173 (219)
++|.++.
T Consensus 238 -~~v~~~~ 244 (319)
T 3frx_A 238 -DEVFSLA 244 (319)
T ss_dssp -SCEEEEE
T ss_pred -CcEEEEE
Confidence 5666654
No 137
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.98 E-value=3.6 Score=32.08 Aligned_cols=109 Identities=12% Similarity=0.133 Sum_probs=66.0
Q ss_pred eeeeeeec-ceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP-GELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
..++++-. ..||.+.. .+.|.+|+. ++.+.... + + .....+..++..+ ...+|..-..+-.|+.||. +
T Consensus 185 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~--~---~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~d~-~ 254 (299)
T 2z2n_A 185 PVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK-I--P---TPNARPHAITAGA--GIDLWFTEWGANKIGRLTS-N 254 (299)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-C--S---STTCCEEEEEECS--TTCEEEEETTTTEEEEEET-T
T ss_pred ceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE-C--C---CCCCCceeEEECC--CCCEEEeccCCceEEEECC-C
Confidence 34555443 67999864 678999988 55544211 1 1 1122345555322 2359998877888999998 4
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCc
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDS 155 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~t 155 (219)
+++. .+. +|. ....+.+++..++.||||+..|-|+..+..+
T Consensus 255 g~~~-~~~----~~~---------------~~~~~~~i~~~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 255 NIIE-EYP----IQI---------------KSAEPHGICFDGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp TEEE-EEE----CSS---------------SSCCEEEEEECSSCEEEEETTTEEEEEEEC-
T ss_pred CceE-EEe----CCC---------------CCCccceEEecCCCEEEEecCCcEEEEEcCc
Confidence 4432 221 121 1234677777668999999878888876543
No 138
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.80 E-value=3.6 Score=38.57 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=66.9
Q ss_pred ccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc--cceeeeeeecccccc
Q psy10905 31 ESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ--ARSIVNKLDCSKLVP 108 (219)
Q Consensus 31 ~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~--tr~I~~~LD~skl~P 108 (219)
..+|+|+|++.....+...-.+ .. .+..++-++ +...+|+.-+ +-.|+.||.. |+++..++..-. -|
T Consensus 174 ~~~~~V~viD~~t~~v~~~i~~--g~------~p~~v~~Sp-DGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G~-~P 242 (567)
T 1qks_A 174 RDAGQIALIDGSTYEIKTVLDT--GY------AVHISRLSA-SGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIGS-EA 242 (567)
T ss_dssp TTTTEEEEEETTTCCEEEEEEC--SS------CEEEEEECT-TSCEEEEEET-TSEEEEEETTSSSCCEEEEEECCS-EE
T ss_pred CCCCeEEEEECCCCeEEEEEeC--CC------CccceEECC-CCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecCC-CC
Confidence 3568999998887666543222 11 122344333 5556777654 4489999996 999888775422 11
Q ss_pred CCCCcccccccccccccCceeeeEeee------cceEEEecce-eEEEEEecCcceeeeee
Q psy10905 109 CSESLQSICIEEPLRQDQCHVTSVCIL------DTCLYIGTTW-GCIVVAEKDSLRPITVF 162 (219)
Q Consensus 109 cSEsl~si~iee~l~~~~~qVtaL~~~------~~~LYIGTtw-G~iiVaea~tLrPit~f 162 (219)
..+++. +.+||++.-+ |-|.|.|+.||+|+..+
T Consensus 243 ---------------------~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 243 ---------------------RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp ---------------------EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred ---------------------ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 144444 5789999988 88999999999998764
No 139
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=91.79 E-value=2.5 Score=36.34 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=70.6
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeee-ccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeec
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVN-HFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDC 103 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~-h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~ 103 (219)
..||...-.++|++++..+..+...-.+. ++. +... +..|.. ....+|..+...-.|..-|.+|++++.++|+
T Consensus 115 ~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~-~~~~--lNeLe~---~~G~lyanvw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 115 SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR-PLDN--LNELEW---VNGELLANVWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp SCEEEECSSSEEEEECTTTCCEEEEEECEETTE-ECCC--EEEEEE---ETTEEEEEETTTTEEEEECTTTCBEEEEEEC
T ss_pred CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc-cccc--ceeeEE---eCCEEEEEECCCCeEEEEECCCCCEEEEEEC
Confidence 78999988889988877765555444442 222 2222 233331 2335999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccCceeeeEeee--cceEEE-ecceeEE
Q psy10905 104 SKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYI-GTTWGCI 148 (219)
Q Consensus 104 skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYI-GTtwG~i 148 (219)
+.|.|-.+.+. .+...--+.+|.. ++.||| |--|--+
T Consensus 189 ~~l~~~~~~~~--------~~~~~vlNGIA~d~~~~~lfVTGK~wp~~ 228 (243)
T 3mbr_X 189 QALVPDADALT--------DSTNDVLNGIAFDAEHDRLFVTGKRWPML 228 (243)
T ss_dssp GGGSTTTTSCC--------CTTSSCEEEEEEETTTTEEEEEETTCSEE
T ss_pred CcCcccccccc--------CCcCCceEEEEEcCCCCEEEEECCCCCcE
Confidence 99988554310 0111223566665 367776 4444433
No 140
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.75 E-value=0.74 Score=36.98 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=50.5
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
..||.|..+|.|..|+.+ +.+.....+. .+ .+..++. .....+|... ..||.+| .+++..-+.+.
T Consensus 148 g~l~vgt~~~~l~~~d~~-g~~~~~~~~~--~~-----~~~~~~~--d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~- 212 (330)
T 3hxj_A 148 GTIYVGSNDNYLYAINPD-GTEKWRFKTN--DA-----ITSAASI--GKDGTIYFGS---DKVYAIN-PDGTEKWNFYA- 212 (330)
T ss_dssp SCEEEECTTSEEEEECTT-SCEEEEEECS--SC-----CCSCCEE--CTTCCEEEES---SSEEEEC-TTSCEEEEECC-
T ss_pred CEEEEEcCCCEEEEECCC-CCEeEEEecC--CC-----ceeeeEE--cCCCEEEEEe---CEEEEEC-CCCcEEEEEcc-
Confidence 557777666667666555 3333332221 11 1122221 1233466665 4566777 55544443331
Q ss_pred ccccCCCCcccccccccccccCceeeeEeeec-ceEEEecceeEEEEEec
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTTWGCIVVAEK 153 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTtwG~iiVaea 153 (219)
....+++++... +.|||||.-|-|...+.
T Consensus 213 --------------------~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 213 --------------------GYWTVTRPAISEDGTIYVTSLDGHLYAINP 242 (330)
T ss_dssp --------------------SSCCCSCCEECTTSCEEEEETTTEEEEECT
T ss_pred --------------------CCcceeceEECCCCeEEEEcCCCeEEEECC
Confidence 113466777765 49999998777777775
No 141
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.75 E-value=5 Score=33.30 Aligned_cols=133 Identities=17% Similarity=0.122 Sum_probs=85.7
Q ss_pred eeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeee--eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 16 VLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTV--NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 16 ~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l--~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
++.+++.=+ ..|=+|..||.|.||++..+.......+ .|.. .|..++-++ +...+-+ -.-+..|+.||
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~------~v~~~~~sp-~g~~l~s-~s~D~~v~iw~ 89 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR------TVRKVAWSP-CGNYLAS-ASFDATTCIWK 89 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSS------CEEEEEECT-TSSEEEE-EETTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCC------cEEEEEECC-CCCEEEE-EECCCcEEEEE
Confidence 567777665 6677888999999999987654433333 2432 366665433 3333333 34456788899
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCc---ceeeeeecccc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDS---LRPITVFRPYE 166 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~t---LrPit~frp~e 166 (219)
.++++.... + .++. -...|++++.. +.+|..|..=|.|.+-+..+ .+++..+..|.
T Consensus 90 ~~~~~~~~~----~-----------~~~~----h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 90 KNQDDFECV----T-----------TLEG----HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp ECCC-EEEE----E-----------EECC----CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred ccCCCeEEE----E-----------EccC----CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 877643211 0 0122 23468888875 46788888889998888644 46678899999
Q ss_pred cceeEEeee
Q psy10905 167 ELVTAILPL 175 (219)
Q Consensus 167 ~~V~~Ii~l 175 (219)
++|+++.--
T Consensus 151 ~~v~~~~~~ 159 (345)
T 3fm0_A 151 QDVKHVVWH 159 (345)
T ss_dssp SCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999987643
No 142
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.72 E-value=4.1 Score=32.29 Aligned_cols=105 Identities=7% Similarity=0.064 Sum_probs=63.7
Q ss_pred ceeeecc-cCCcEEEEEcc-CCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeee
Q psy10905 25 GELWCGE-SDGNISIYTMS-EHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 25 ~eLW~G~-~~g~Isi~~l~-~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
..||.+. .+++|.+|+++ ++.+.....+....... ......++.. ....+|.....+..|+.||.+++++...+.
T Consensus 188 ~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~~p~~i~~d--~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 188 YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH-EGGADGMDFD--EDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS-SCEEEEEEEB--TTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC-CCCCCceEEC--CCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 4688875 46899999887 44554333332222100 0223445532 233699998888899999999887765553
Q ss_pred ccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecce-eEEEEEec
Q psy10905 103 CSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTW-GCIVVAEK 153 (219)
Q Consensus 103 ~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtw-G~iiVaea 153 (219)
. | ...+++++... +.|||++.. |.|.+.+.
T Consensus 265 ~----~-----------------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 265 C----P-----------------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp C----S-----------------SSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred C----C-----------------CCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 2 1 13466777633 459999875 45666653
No 143
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.68 E-value=5.3 Score=33.80 Aligned_cols=126 Identities=7% Similarity=-0.079 Sum_probs=68.6
Q ss_pred ceeeecccCCcEEEEEccCC--ceEeeeeeeccCCccccceeEEEeecCCCCceEEEEE-eCCcEEEEEecccceeeeee
Q psy10905 25 GELWCGESDGNISIYTMSEH--SVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYV-YPGCSVYQWDTQARSIVNKL 101 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~--~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv-~pg~~Vyqw~~~tr~I~~~L 101 (219)
..||.|..++.|.+|.+... .+............-+...++.++-+| +...+-.+- .-...|+.||.++++.+..+
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred cEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 56899999999999988743 344333332211111111223232222 333333332 23467999999999887765
Q ss_pred eccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCcceee--eeecccccceeEEee
Q psy10905 102 DCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDSLRPI--TVFRPYEELVTAILP 174 (219)
Q Consensus 102 D~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~tLrPi--t~frp~e~~V~~Ii~ 174 (219)
+-. ..|.+|+... .+|..|+ .+-+++.+..+=+++ .....+.+.|+++.-
T Consensus 174 ~~~----------------------~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 174 ETR----------------------GEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp ECS----------------------SCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred CCC----------------------CceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 421 1255666543 3444444 455666665544433 456677778887653
No 144
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=91.65 E-value=4.6 Score=32.66 Aligned_cols=134 Identities=11% Similarity=0.021 Sum_probs=77.1
Q ss_pred ceeeeeeeec----ceeeecccCCcEEEEEccCCceEeeeee-eccCCccccceeEEEeecCCCCceEEEEEeCCcEEEE
Q psy10905 15 SVLHAITAVP----GELWCGESDGNISIYTMSEHSVTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQ 89 (219)
Q Consensus 15 ~~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyq 89 (219)
..+.+++.-+ ..|=.|..||.|.||+++.+.......+ .|.. .|..++-.+............+..|+.
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~------~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSA------SVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSS------CEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCC------ceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 3467777642 4678888999999999986543221112 2322 355554333211123333455668899
Q ss_pred EecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec---------------ceEEEecceeEEEEEecC
Q psy10905 90 WDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---------------TCLYIGTTWGCIVVAEKD 154 (219)
Q Consensus 90 w~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---------------~~LYIGTtwG~iiVaea~ 154 (219)
||..+.+.... ..++. ....|++++... ..|..|..=|.|-+-+..
T Consensus 128 wd~~~~~~~~~---------------~~~~~----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~ 188 (297)
T 2pm7_B 128 VEFKENGTTSP---------------IIIDA----HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (297)
T ss_dssp EEBCSSSCBCC---------------EEEEC----CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE
T ss_pred EEecCCCceee---------------eeeec----ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc
Confidence 99876531100 00111 122344444432 467778888888888754
Q ss_pred cc----eeeeeecccccceeEEe
Q psy10905 155 SL----RPITVFRPYEELVTAIL 173 (219)
Q Consensus 155 tL----rPit~frp~e~~V~~Ii 173 (219)
+- .++..++.|.+.|+++.
T Consensus 189 ~~~~~~~~~~~l~~H~~~V~~v~ 211 (297)
T 2pm7_B 189 SDAQTYVLESTLEGHSDWVRDVA 211 (297)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEE
T ss_pred CCCceEEEEEEecCCCCceEEEE
Confidence 43 36678889999998876
No 145
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.50 E-value=6.5 Score=34.14 Aligned_cols=128 Identities=12% Similarity=0.132 Sum_probs=82.6
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
...+.++++-+ ..|=+|..+|.|.+|+.....+.. ...|.. .|..++..+ +...+-+ ...+-.|+.||
T Consensus 262 ~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~--~~~h~~------~v~~~~~~~-~~~~l~t-~~~d~~i~~w~ 331 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQT--LTGHSS------SVWGVAFSP-DGQTIAS-ASDDKTVKLWN 331 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE--ECCCSS------CEEEEEECT-TSSEEEE-EETTSCEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEE--EecCCC------CeEEEEECC-CCCEEEE-EeCCCeEEEEe
Confidence 33456666655 678889899999999866443321 223433 355555333 3333333 34455789999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCcceeeeeecccccce
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELV 169 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V 169 (219)
.+++++.. + . .....|++++.. +..|..|..-|.|.+-+. +-+++..+..|.+.|
T Consensus 332 ~~~~~~~~-~-----------------~----~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v 388 (577)
T 2ymu_A 332 RNGQHLQT-L-----------------T----GHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 388 (577)
T ss_dssp TTSCEEEE-E-----------------C----CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCE
T ss_pred CCCCeeEE-E-----------------e----CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCe
Confidence 87765421 1 1 123457777775 468888999999999885 457788899999999
Q ss_pred eEEee
Q psy10905 170 TAILP 174 (219)
Q Consensus 170 ~~Ii~ 174 (219)
+++.-
T Consensus 389 ~~~~~ 393 (577)
T 2ymu_A 389 RGVAF 393 (577)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98753
No 146
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=91.49 E-value=5 Score=33.47 Aligned_cols=103 Identities=14% Similarity=0.080 Sum_probs=62.3
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
.-+|++...++|..|+++.+.+.. +.+++ .+..++-. ....+|.....| ||.||.+++++..-.+..
T Consensus 62 ~l~~~d~~~~~i~~~d~~~~~~~~---~~~~~------~v~~i~~~--~dg~l~v~~~~g--l~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 62 TAWWFNILERELHELHLASGRKTV---HALPF------MGSALAKI--SDSKQLIASDDG--LFLRDTATGVLTLHAELE 128 (326)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEE---EECSS------CEEEEEEE--ETTEEEEEETTE--EEEEETTTCCEEEEECSS
T ss_pred EEEEEECCCCEEEEEECCCCcEEE---EECCC------cceEEEEe--CCCeEEEEECCC--EEEEECCCCcEEEEeeCC
Confidence 457888888999999888765542 22221 34445421 233578777544 999999998865322110
Q ss_pred ccccCCCCcccccccccccccCceeeeEeeec-ceEEEecc-------eeEEEEEecCcce
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTT-------WGCIVVAEKDSLR 157 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTt-------wG~iiVaea~tLr 157 (219)
. .....++..+++.. +.+|||+. .|-|...+..+++
T Consensus 129 ---------------~--~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~ 172 (326)
T 2ghs_A 129 ---------------S--DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT 172 (326)
T ss_dssp ---------------T--TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE
T ss_pred ---------------C--CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEE
Confidence 0 01234677777754 67999986 3677777733333
No 147
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.30 E-value=2.9 Score=36.78 Aligned_cols=112 Identities=10% Similarity=0.136 Sum_probs=80.5
Q ss_pred eeeeecceeeecccC-CcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccccee
Q psy10905 19 AITAVPGELWCGESD-GNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSI 97 (219)
Q Consensus 19 s~a~v~~eLW~G~~~-g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I 97 (219)
.+..-+..||.+.-+ |+|.+++++++.+.... +. +. ..-.-++ -....+|.....+-.++.+|.+|.++
T Consensus 59 GL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--~~----~FgeGit---~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL--GN----IFAEGLA---SDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC--TT----CCEEEEE---ECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred eEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--CC----cceeEEE---EeCCEEEEEEccCCEEEEEECCcCcE
Confidence 344334888876543 67999999988777555 42 11 1112233 24557999999999999999999999
Q ss_pred eeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeee
Q psy10905 98 VNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 98 ~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~f 162 (219)
+.++.... | + -+|+-.+..||+.-..+-|.+.|+.|++.+...
T Consensus 129 ~~ti~~~~--------------e----G----wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 129 ERTTRYSG--------------E----G----WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp EEEEECSS--------------C----C----CCEEEETTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred EEEEeCCC--------------c----e----eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 99998631 1 1 256666899999998999999999998665443
No 148
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.79 E-value=3.9 Score=33.52 Aligned_cols=150 Identities=8% Similarity=0.036 Sum_probs=72.9
Q ss_pred Cceeeeeeeec----ceeeecccCCcEEEEEccCCceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 14 SSVLHAITAVP----GELWCGESDGNISIYTMSEHSVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 14 ~~~i~s~a~v~----~eLW~G~~~g~Isi~~l~~~~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
...+.+++.-+ ..|=+|..||.|.||+++.+... ....-.|..+ |..++-.+.........-..+-.|+
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~------V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSS------VNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSC------CCEEEECCTTTCSCEEEECSSSCEE
T ss_pred CccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCc------eEEEEECCCCCCcEEEEEcCCCCEE
Confidence 34467777642 56788889999999998865432 2222234333 4444332221112223333455788
Q ss_pred EEecccceeeeeeecccccc-CCCCcccccccccccccCceeee----EeeecceEEEecceeEEEEEecCc---ceeee
Q psy10905 89 QWDTQARSIVNKLDCSKLVP-CSESLQSICIEEPLRQDQCHVTS----VCILDTCLYIGTTWGCIVVAEKDS---LRPIT 160 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~P-cSEsl~si~iee~l~~~~~qVta----L~~~~~~LYIGTtwG~iiVaea~t---LrPit 160 (219)
.||..+++. .++.+..+ ....+..++......... -+.. ..-.+.+|..|..=|.|-+-+..+ .+++.
T Consensus 131 lwd~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 131 LLTYTGEGQ---WEVKKINNAHTIGCNAVSWAPAVVPGS-LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp EEEECSSSC---EEECCBTTSSSSCBCCCEECCCCCC-------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE
T ss_pred EEecCCCCC---cceeeeeccccCCcceEEEccccCCcc-ccccccccCccccceEEEecCCCeEEEEEeCCCCccceee
Confidence 898876531 11111111 111111111110000000 0000 000023555566666666666543 46788
Q ss_pred eecccccceeEEe
Q psy10905 161 VFRPYEELVTAIL 173 (219)
Q Consensus 161 ~frp~e~~V~~Ii 173 (219)
.++.|.+.|+++.
T Consensus 207 ~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 207 KLEAHSDWVRDVA 219 (316)
T ss_dssp CCBCCSSCEEEEE
T ss_pred ecccCCCceEEEE
Confidence 8999999999876
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.55 E-value=5.4 Score=31.52 Aligned_cols=138 Identities=17% Similarity=0.243 Sum_probs=79.7
Q ss_pred eeeeeeec--ceeeecc-cCCcEEEEEccC-CceEeee--eeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 17 LHAITAVP--GELWCGE-SDGNISIYTMSE-HSVTSHD--TVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~-~~g~Isi~~l~~-~~vs~~~--~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
++++++-+ ..|+++. .+++|.+|++++ +.+.... .+.-.. +..+..++-.+ +...+|..-..+..|+.|
T Consensus 131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~ 205 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE----GAGPRHMVFHP-NEQYAYCVNELNSSVDVW 205 (343)
T ss_dssp BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST----TCCEEEEEECT-TSSEEEEEETTTTEEEEE
T ss_pred ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC----CCCcceEEECC-CCCEEEEEeCCCCEEEEE
Confidence 34454444 5688776 789999999986 5555322 221111 12345555433 455677777678889999
Q ss_pred ecc--cceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEec-ceeEEEEEecC----cceeeee
Q psy10905 91 DTQ--ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT-TWGCIVVAEKD----SLRPITV 161 (219)
Q Consensus 91 ~~~--tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT-twG~iiVaea~----tLrPit~ 161 (219)
|.+ +++.... ...+.+|.. ......+.+++.. +.+||+.. .-|.|.+.+.. +++++..
T Consensus 206 ~~~~~~g~~~~~-~~~~~~~~~------------~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 206 ELKDPHGNIECV-QTLDMMPEN------------FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp ESSCTTSCCEEE-EEEECSCTT------------CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred EecCCCCcEEEE-eeccccCcc------------ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 984 4543221 111112211 1234456677776 45899766 46888888876 6777766
Q ss_pred ecccccceeEEe
Q psy10905 162 FRPYEELVTAIL 173 (219)
Q Consensus 162 frp~e~~V~~Ii 173 (219)
+..... ++.+.
T Consensus 273 ~~~~~~-~~~~~ 283 (343)
T 1ri6_A 273 QPTETQ-PRGFN 283 (343)
T ss_dssp EECSSS-CCCEE
T ss_pred ecCCCc-cceEE
Confidence 655443 55443
No 150
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=90.31 E-value=4.5 Score=36.74 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=73.4
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCC-c-----cc-cceeEEEeecCCCCceEEEEEe---------CCcEEE
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHP-V-----IS-NVDVSFLVSSPSTSAWVWSYVY---------PGCSVY 88 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~-~-----~~-~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vy 88 (219)
+.+|.-. +|+++++++.++.++....++-+.+ . -| +.+..-+- .+....|.... ||..|.
T Consensus 239 ~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~---~~~~~lyV~~~~~~~~~hk~~~~~V~ 314 (386)
T 3sjl_D 239 RLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH---RALDRIYLLVDQRDEWRHKTASRFVV 314 (386)
T ss_dssp EEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE---TTTTEEEEEEEECCTTCTTSCEEEEE
T ss_pred cEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeEC---CCCCeEEEEeccccccccCCCCCEEE
Confidence 4678775 6999999998776665444432221 0 00 11222222 35667888875 678999
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecc---eEEEecc-eeEEEEEecCcceeeee
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDT---CLYIGTT-WGCIVVAEKDSLRPITV 161 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~---~LYIGTt-wG~iiVaea~tLrPit~ 161 (219)
..|.+|+|++.+++.-+ .+.+|++..+ +||+..- -|-|.|.|+.+++.+.-
T Consensus 315 viD~~t~kv~~~i~vg~----------------------~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 315 VLDAKTGERLAKFEMGH----------------------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp EEETTTCCEEEEEEEEE----------------------EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEECCCCeEEEEEECCC----------------------CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 99999999999998763 2335666442 5777543 57899999999987543
No 151
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.87 E-value=3.7 Score=38.48 Aligned_cols=107 Identities=16% Similarity=0.231 Sum_probs=65.3
Q ss_pred eeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 17 LHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
|.+++.-. ..||.|-. +.+..|+...+.+.. +.... .-.|..++ .+...+|..... -+|.+|.+++
T Consensus 65 i~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~~------~~~~~-~~~i~~i~---~~~g~lWigt~~--Gl~~~~~~~~ 131 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTD-NGILVYNYRADRYEQ------PETDF-PTDVRTMA---LQGDTLWLGALN--GLYTYQLQSR 131 (758)
T ss_dssp EEEEEEETTTEEEEEET-TEEEEEETTTTEECC------CSCCC-CSCEEEEE---EETTEEEEEETT--EEEEEETTTC
T ss_pred EEEEEEcCCCcEEEEeC-CCeEEEeCCCCEEEC------cccCC-CceEEEEE---ecCCcEEEEcCC--cceeEeCCCC
Confidence 55554433 78999954 669999888765532 11111 12355555 234569999875 5889999887
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecC
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKD 154 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~ 154 (219)
++.. ++-. + . ......|.+|+.. ++.|||||..|.. ..+..
T Consensus 132 ~~~~-~~~~---~-----------~--~l~~~~i~~i~~d~~g~lWigt~~Gl~-~~~~~ 173 (758)
T 3ott_A 132 KLTS-FDTR---R-----------N--GLPNNTIYSIIRTKDNQIYVGTYNGLC-RYIPS 173 (758)
T ss_dssp CEEE-ECHH---H-----------H--CCSCSCEEEEEECTTCCEEEEETTEEE-EEETT
T ss_pred eEEE-eccC---C-----------C--CcCCCeEEEEEEcCCCCEEEEeCCCHh-hCccC
Confidence 7643 2110 0 0 1123457788776 6899999988844 44543
No 152
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.81 E-value=8.9 Score=32.90 Aligned_cols=114 Identities=11% Similarity=0.158 Sum_probs=82.4
Q ss_pred eeeeeecceeeecccC---CcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 18 HAITAVPGELWCGESD---GNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 18 ~s~a~v~~eLW~G~~~---g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
..+++-+..||.+.-+ ++|++++++++.+.....+. +.+ .-.-++ -....+|......-.++.+|.+|
T Consensus 24 qGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~--~~~----fgeGi~---~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVP--PPY----FGAGIV---AWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp EEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECC--TTC----CEEEEE---EETTEEEEEESSSSEEEEEETTT
T ss_pred ccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCC--CCc----ceeEEE---EeCCEEEEEEeeCCEEEEEECCc
Confidence 4555555789987544 48999999988887665541 111 111122 23567999999999999999999
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeee
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~f 162 (219)
.+++.++.... + + -+|+-.+..||+.--.+-|.+.|+.|++.+...
T Consensus 95 l~~~~ti~~~~--------------~----G----wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 95 LTPRARFRYPG--------------E----G----WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp TEEEEEEECSS--------------C----C----CEEEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred CcEEEEEeCCC--------------C----c----eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 99999987531 1 1 255556789999999999999999998665444
No 153
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=89.73 E-value=8.1 Score=32.32 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=63.6
Q ss_pred cccCCcEEEEEccCCceE---------------eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 30 GESDGNISIYTMSEHSVT---------------SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 30 G~~~g~Isi~~l~~~~vs---------------~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
|..+|.|.||+++...-. ....-.|. ..|..++-.+ +...+-+.-.-|+.|+.||.++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~------~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT------NPIKMVRLNR-KSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCS------SCEEEEEECT-TSSEEEEEETTCSEEEEEETTT
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC------CceEEEEECC-CCCEEEEEeCCCCEEEEEECCC
Confidence 778899999988864300 11122332 3467776544 4455666666666699999999
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecC
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKD 154 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~ 154 (219)
++.+.++.-. .....|++++... ..|..|..-|.|-+-+..
T Consensus 228 ~~~~~~~~~g-------------------~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 228 GVLVREFRRG-------------------LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CCEEEEEECT-------------------TCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CcEEEEEEcC-------------------CCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 9887766311 1234677888754 678888888889888753
No 154
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.58 E-value=7.1 Score=31.48 Aligned_cols=110 Identities=9% Similarity=0.138 Sum_probs=67.4
Q ss_pred eeeeeec-ceee-ecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCC----cEEEEEe
Q psy10905 18 HAITAVP-GELW-CGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG----CSVYQWD 91 (219)
Q Consensus 18 ~s~a~v~-~eLW-~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg----~~Vyqw~ 91 (219)
.+.++-. ..|| ++..++.|.+|+++.+.+..... .+. ..+..++-.+ ...+|.....+ ..|+.||
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~------~~~~~i~~~~--dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-SHK------ANPAAIKIHK--DGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-CSS------SSEEEEEECT--TSCEEEEECTTSSSCCEEEEEC
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee-CCC------CCcceEEECC--CCcEEEEeCCCCCCCceEEEEe
Confidence 3444333 5688 56677899999887665543211 111 2355665322 23588887766 6899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecce-------eEEEEEecCc
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTW-------GCIVVAEKDS 155 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtw-------G~iiVaea~t 155 (219)
.+++++...+. .. + ....+..++.. ++.+||++.. |-|...+..+
T Consensus 119 ~~~~~~~~~~~--~~-~----------------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 119 ENGDNLQDIIE--DL-S----------------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TTSCSCEEEEC--SS-S----------------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCEEEEEEc--cC-c----------------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 99988753321 00 0 12356667665 4789999874 6788887654
No 155
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.37 E-value=6.8 Score=36.03 Aligned_cols=128 Identities=14% Similarity=0.096 Sum_probs=75.3
Q ss_pred eecccCCcEEEEEccCCceEe--eeeeeccCCccccceeEEEeecCC----CCceEEEEEeCCcEEEEEecccceeee--
Q psy10905 28 WCGESDGNISIYTMSEHSVTS--HDTVNHFHPVISNVDVSFLVSSPS----TSAWVWSYVYPGCSVYQWDTQARSIVN-- 99 (219)
Q Consensus 28 W~G~~~g~Isi~~l~~~~vs~--~~~l~h~~~~~~~~~V~~L~~~~~----~~~~Vwsyv~pg~~Vyqw~~~tr~I~~-- 99 (219)
=.|..+|.|.||++..+.... ...+.|... .|..+.-.+. .....-.....+..|..||..+.+...
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~-----~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG-----EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEECCC-----SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEecCC-----cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 345677899999987654322 222343222 2444433222 011244445556789999998764321
Q ss_pred eeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEEecceeEEEEEecCcc-eeeeeecccccceeEE
Q psy10905 100 KLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTTWGCIVVAEKDSL-RPITVFRPYEELVTAI 172 (219)
Q Consensus 100 ~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTtwG~iiVaea~tL-rPit~frp~e~~V~~I 172 (219)
.+...+ | .. .+. .....|++++... +.|..|..=|-|-+-|..+- .|+..++.|.+.|++|
T Consensus 252 ~~~~~~--p----~~--~l~----~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv 314 (524)
T 2j04_B 252 FKMCEK--P----SL--TLS----LADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSV 314 (524)
T ss_dssp EECCCS--C----SE--EEC----CTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEE
T ss_pred ceeecC--c----eE--EEE----cCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEE
Confidence 011110 1 01 122 2346788998754 78999999999999998754 6888899999999999
No 156
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=88.53 E-value=6.5 Score=34.27 Aligned_cols=112 Identities=9% Similarity=0.071 Sum_probs=78.7
Q ss_pred eeeeecceeeecccC---CcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccc
Q psy10905 19 AITAVPGELWCGESD---GNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQAR 95 (219)
Q Consensus 19 s~a~v~~eLW~G~~~---g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr 95 (219)
.+.+-+..||.+.-+ ++|.+++++++.+.....+. +. ..-.-++ -....+|.....+-.++.+|.+|.
T Consensus 47 GL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~----~FgeGit---~~g~~ly~ltw~~~~v~v~D~~t~ 117 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KR----YFGEGIS---DWKDKIVGLTWKNGLGFVWNIRNL 117 (262)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TT----CCEEEEE---EETTEEEEEESSSSEEEEEETTTC
T ss_pred eEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC--Cc----cceeEEE---EeCCEEEEEEeeCCEEEEEECccC
Confidence 344334788877543 38999999988887665541 11 1112233 245579999999999999999999
Q ss_pred eeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeee
Q psy10905 96 SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITV 161 (219)
Q Consensus 96 ~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~ 161 (219)
+++.++.... + + -+|+-.+..||+.--.+-|.+.|+.|++.+..
T Consensus 118 ~~~~ti~~~~--------------e----G----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~ 161 (262)
T 3nol_A 118 RQVRSFNYDG--------------E----G----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRT 161 (262)
T ss_dssp CEEEEEECSS--------------C----C----CCEEECSSCEEECCSSSEEEEECTTTCSEEEE
T ss_pred cEEEEEECCC--------------C----c----eEEecCCCEEEEECCCCeEEEEcCCCCeEEEE
Confidence 9999998742 1 0 14555678899987678899999998865444
No 157
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=87.81 E-value=9.2 Score=30.54 Aligned_cols=64 Identities=2% Similarity=-0.112 Sum_probs=43.0
Q ss_pred eeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeee
Q psy10905 26 ELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNK 100 (219)
Q Consensus 26 eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~ 100 (219)
=+|++..+|+|..|+.+.+ +.-. ..+ ...+..|+..+ ...+|....-+-.|+.||.++++++.-
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~---~~~-----~~~~~~l~~~~--dg~l~v~~~~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPE---MHP-----SHHQNGHCLNK--QGHLIACSHGLRRLERQREPGGEWESI 105 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEE---ESS-----CSSEEEEEECT--TCCEEEEETTTTEEEEECSTTCCEEEE
T ss_pred EEEEeCCCCEEEEEECCCC-eEEE---ECC-----CCCcceeeECC--CCcEEEEecCCCeEEEEcCCCCcEEEE
Confidence 3899988999999988865 3322 111 12345565322 234888877778899999988886543
No 158
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=87.62 E-value=8.8 Score=33.03 Aligned_cols=119 Identities=8% Similarity=0.080 Sum_probs=77.1
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
..||.....++|++++.+...+...-.+.-...+.. ....|.. .+ ..+|.....+-.|..-|.+|++++.++|+.
T Consensus 117 ~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~--~~nele~--~d-g~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 117 KILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVI--RLNELEY--IN-GEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp SSEEEECSSSEEEEECTTTCCEEEEEECEETTEECC--CEEEEEE--ET-TEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccc--cceeEEE--EC-CEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 778888877888888776555443333321111111 1233432 13 369999999999999999999999999998
Q ss_pred ccccCCCCcccccccccccccCceeeeEeee--cceEEEe-cceeEEEEEecCcc
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIG-TTWGCIVVAEKDSL 156 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIG-TtwG~iiVaea~tL 156 (219)
.+.|-. + -+. .+....-..++.. +++|||. --|+-|-+.+..+.
T Consensus 192 g~~~~~-----~-~~~--~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 192 NLRKKL-----I-DEG--FRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHHH-----H-HTT--CTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred Cccccc-----c-ccc--ccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 654410 0 000 1233456778776 3689995 48999999885543
No 159
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=86.07 E-value=10 Score=29.39 Aligned_cols=118 Identities=15% Similarity=0.146 Sum_probs=70.8
Q ss_pred EEEeeCCCc---eeeeeeeec-ceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEE
Q psy10905 7 VLTELGASS---VLHAITAVP-GELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYV 81 (219)
Q Consensus 7 ~ltelg~~~---~i~s~a~v~-~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv 81 (219)
.+.|+..|. ..++++.=. -.||.+.. +|+|.+|+.+ +.+.... .+. ....+..|+.. ....+|...
T Consensus 9 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~---~~~---~~~~~~~i~~~--~~g~l~v~~ 79 (300)
T 2qc5_A 9 YLEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFE---VPT---PDAKVMCLIVS--SLGDIWFTE 79 (300)
T ss_dssp EEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE---CSS---TTCCEEEEEEC--TTSCEEEEE
T ss_pred eEEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEE---CCC---CCCcceeEEEC--CCCCEEEEe
Confidence 456665433 245665544 77999974 6899999877 5554321 111 11245556532 223599988
Q ss_pred eCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecc-eeEEEEEecC
Q psy10905 82 YPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTT-WGCIVVAEKD 154 (219)
Q Consensus 82 ~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTt-wG~iiVaea~ 154 (219)
..+-.|+.+|.+ +++. ++.. | .....+.+|++. ++.|||++. -|.|...+..
T Consensus 80 ~~~~~v~~~d~~-g~~~-~~~~----~---------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 80 NGANKIGKLSKK-GGFT-EYPL----P---------------QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp TTTTEEEEECTT-SCEE-EEEC----S---------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred cCCCeEEEECCC-CCeE-EecC----C---------------CCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 877889999988 6553 2211 1 012456677776 478999887 4567666643
No 160
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.69 E-value=13 Score=30.59 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=60.0
Q ss_pred ceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeC----------CcEEEEEecc
Q psy10905 25 GELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYP----------GCSVYQWDTQ 93 (219)
Q Consensus 25 ~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~p----------g~~Vyqw~~~ 93 (219)
..||.... .++|.+|+++.+.....+.+... ++ -.-|+.. ....+|.+... +..|+.+|.+
T Consensus 197 ~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~----~g--P~gi~~d--~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 197 SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI----PN--PGNIKRN--ADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp SEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC----SS--EEEEEEC--TTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CEEEEEeCCCCeEEEEECCCCcCCccceEEeC----CC--CCCeEEC--CCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 45888754 48999999885322111111111 11 2234422 22359999876 5679999985
Q ss_pred cceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecc-eeEEEEEec
Q psy10905 94 ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT-WGCIVVAEK 153 (219)
Q Consensus 94 tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt-wG~iiVaea 153 (219)
++++..+.... ......+++++..+++|||++. -+.|.+.+.
T Consensus 269 -G~~~~~~~~~~-----------------g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 269 -GNILEVIPLPP-----------------PFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp -SCEEEEEECCT-----------------TTTTSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred -CCEEEEEECCC-----------------CCccccceEEEEeCCEEEEeecCCCceEEEec
Confidence 56655554321 0113456677777899999975 456666653
No 161
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.55 E-value=13 Score=30.14 Aligned_cols=100 Identities=12% Similarity=0.061 Sum_probs=61.6
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
.=+|+...+++|..|+++.+.+.. ..++. .+..++-.+ +. .+|... +..|+.||.++++++.-.+..
T Consensus 26 ~l~~~d~~~~~i~~~d~~~~~~~~---~~~~~------~~~~i~~~~-dG-~l~v~~--~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 26 SLLFVDIPAKKVCRWDSFTKQVQR---VTMDA------PVSSVALRQ-SG-GYVATI--GTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEE---EECSS------CEEEEEEBT-TS-SEEEEE--TTEEEEEETTTTEEEEEEECC
T ss_pred EEEEEECCCCEEEEEECCCCcEEE---EeCCC------ceEEEEECC-CC-CEEEEE--CCeEEEEECCCCcEEEEEecC
Confidence 446777778899999888665432 22221 345555322 33 378776 568999999998875433221
Q ss_pred ccccCCCCcccccccccccccCceeeeEeeec-ceEEEecc------------eeEEEEEecC
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTT------------WGCIVVAEKD 154 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTt------------wG~iiVaea~ 154 (219)
. .....++..+++.. +.+|+||. .|.|...+..
T Consensus 93 ~-----------------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 93 N-----------------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp T-----------------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred C-----------------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC
Confidence 0 12345567777753 67999984 3677777753
No 162
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.85 E-value=14 Score=33.52 Aligned_cols=114 Identities=7% Similarity=-0.080 Sum_probs=73.5
Q ss_pred ceeeeccc-----CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEe---------CCcEEEEE
Q psy10905 25 GELWCGES-----DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVY---------PGCSVYQW 90 (219)
Q Consensus 25 ~eLW~G~~-----~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vyqw 90 (219)
..++.-.. .|+++|++.+...+...-.+- ..+ +++.++ +...+|..-. .+-.|..|
T Consensus 45 ~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-------~~P--~va~sp-DG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 45 RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-------FLP--NPVVAD-DGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-------SSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-------CCC--cEEECC-CCCEEEEEcccccccccCCCCCEEEEE
Confidence 55555533 478999988877776544331 112 354444 6666887652 34679999
Q ss_pred ecccceeeeeeeccc--cccCCCCcccccccccccccCceeeeEeeecceEEEecc--eeEEEEEecCcceeeeee
Q psy10905 91 DTQARSIVNKLDCSK--LVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT--WGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 91 ~~~tr~I~~~LD~sk--l~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt--wG~iiVaea~tLrPit~f 162 (219)
|.+|++++.++.+-. -... ....+=-++.-.+.+|||.-. -+.|-|.|..+.+.+..+
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~--------------g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLV--------------GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCB--------------SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEEEEECCCcccccc--------------CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 999999999997631 0000 011121233445689999863 588999999999887665
No 163
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=84.04 E-value=17 Score=30.16 Aligned_cols=96 Identities=8% Similarity=0.117 Sum_probs=55.5
Q ss_pred ceeeecc-cCCcEEEEEcc--CC-ceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeee
Q psy10905 25 GELWCGE-SDGNISIYTMS--EH-SVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNK 100 (219)
Q Consensus 25 ~eLW~G~-~~g~Isi~~l~--~~-~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~ 100 (219)
..||... .+++|.+|+++ ++ .++....+...+. ......-++. .....+|.+..-+..|+.||. +++++.+
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~--~~~~p~gi~~--d~~G~lwva~~~~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG--IKGGMDGSVC--DAEGHIWNARWGEGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT--SSSEEEEEEE--CTTSCEEEEEETTTEEEEECT-TCCEEEE
T ss_pred CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC--CCCCCCeeEE--CCCCCEEEEEeCCCEEEEECC-CCCEEEE
Confidence 4576553 45889999986 33 3332222222111 0112233442 223359999988889999998 4555544
Q ss_pred eeccccccCCCCcccccccccccccCceeeeEeeec---ceEEEeccee
Q psy10905 101 LDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWG 146 (219)
Q Consensus 101 LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG 146 (219)
+.. | ..++++++..+ +.|||++..+
T Consensus 266 i~~----~-----------------~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 266 YEV----P-----------------GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEC----S-----------------CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEC----C-----------------CCCcEEEEEecCCCCEEEEEecCC
Confidence 431 2 13578888762 6899998765
No 164
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=83.43 E-value=15 Score=29.16 Aligned_cols=116 Identities=13% Similarity=-0.040 Sum_probs=71.3
Q ss_pred eeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccccee-eeeeeccc
Q psy10905 27 LWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSI-VNKLDCSK 105 (219)
Q Consensus 27 LW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I-~~~LD~sk 105 (219)
+.++..+|.|.+|++..+.+.....+. ..+. .++-++ +...+|..-..+..|+.||.+++++ ...+....
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLG-------YDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECC-------CCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred EEEecCCCeEEEEeCcccceeeeEEcc-------CCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 445667899999999877665433321 1123 454333 4556888888788999999999887 33332110
Q ss_pred cccCCCCcccccccccccccCceeeeEeee--cceEEEeccee---EEEEEecCcceeeeeecccccceeEEe
Q psy10905 106 LVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWG---CIVVAEKDSLRPITVFRPYEELVTAIL 173 (219)
Q Consensus 106 l~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG---~iiVaea~tLrPit~frp~e~~V~~Ii 173 (219)
.+ ..++++. +.+||++..-| .|.+.+..+.+++..+.. ....+.+.
T Consensus 84 -----------------~~----~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~ 134 (331)
T 3u4y_A 84 -----------------SS----MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIA 134 (331)
T ss_dssp -----------------SC----CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEE
T ss_pred -----------------CC----ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceE
Confidence 01 1124443 46788554443 899999988888776644 33344443
No 165
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=82.88 E-value=14 Score=28.45 Aligned_cols=111 Identities=11% Similarity=0.106 Sum_probs=61.9
Q ss_pred eeeeeec-ceeee-c-ccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 18 HAITAVP-GELWC-G-ESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 18 ~s~a~v~-~eLW~-G-~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
+++++=. ..||. + ..+++|.+|+.......... ..+. .....|+..+ + ..+|..-. +-.|+.||.++
T Consensus 27 ~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~~~------~~p~~i~~~~-~-g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FNGL------YQPQGLAVDG-A-GTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECC-----EECC-CCSC------CSCCCEEECT-T-CCEEEEET-TTEEEEECTTC
T ss_pred cceEECCCCCEEEEccCCCCcEEEecCCCcccceEe-eCCc------CCcceeEECC-C-CCEEEEcC-CCEEEEEeCCC
Confidence 4555433 67998 7 45688999966543322111 1111 1223344322 2 24888877 77899999887
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecc-eeEEEEEecCcceee
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTT-WGCIVVAEKDSLRPI 159 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTt-wG~iiVaea~tLrPi 159 (219)
+++.. + +. .....+.+|++. ++.|||+.. -|.|.+.+..+.+..
T Consensus 97 ~~~~~-~------~~--------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 97 NNQTV-L------PF--------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp SCCEE-C------CC--------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred ceEee-e------ec--------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence 76532 1 10 112345677776 467999864 567888787665443
No 166
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=82.76 E-value=14 Score=34.53 Aligned_cols=91 Identities=11% Similarity=0.065 Sum_probs=61.3
Q ss_pred EEEeeCCCceeeeeeeec--ceeeecccCCcEEEEEcc--CCceEeeeeeeccCCccccceeEEEeecC---CCCceEEE
Q psy10905 7 VLTELGASSVLHAITAVP--GELWCGESDGNISIYTMS--EHSVTSHDTVNHFHPVISNVDVSFLVSSP---STSAWVWS 79 (219)
Q Consensus 7 ~ltelg~~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~--~~~vs~~~~l~h~~~~~~~~~V~~L~~~~---~~~~~Vws 79 (219)
++.++..+...|.+++=+ +.|+++..+|.|+++++. ...+. ..+.. +..-.+++.++ -+..++|.
T Consensus 189 v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~------G~~P~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 189 IKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKI------GSEARSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEEC------CSEEEEEEECCSTTCTTTEEEE
T ss_pred EEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEec------CCCCceeEEccccCCCCCEEEE
Confidence 334444444446555443 889999889999999995 33332 22322 12235665432 26678999
Q ss_pred EEeCCcEEEEEecccceeeeeeeccc
Q psy10905 80 YVYPGCSVYQWDTQARSIVNKLDCSK 105 (219)
Q Consensus 80 yv~pg~~Vyqw~~~tr~I~~~LD~sk 105 (219)
.-+-+..|..+|..|.+++.+++...
T Consensus 261 ~n~~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 261 GAYWPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCE
T ss_pred EEccCCeEEEEECCCCcEEEEEeccc
Confidence 99988889999999999999988653
No 167
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=81.80 E-value=1.1 Score=38.71 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=39.2
Q ss_pred cceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeec
Q psy10905 24 PGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDC 103 (219)
Q Consensus 24 ~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~ 103 (219)
+..|++|..+|.|..|+.+++.+.+.... ++.. ..++ + ....++..-..+..||.||.+|++.+-+++.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~-s~p~---~----~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVL-QVPT---H----VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSC-CCC------------CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC---CCce-ecce---E----cCCCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 37889998999999999998888876654 2211 1111 1 1112333223456799999999988766643
No 168
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=81.42 E-value=21 Score=30.19 Aligned_cols=139 Identities=7% Similarity=-0.091 Sum_probs=60.9
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
..|=.|..|+.|.||+++.+.- ......|..+ |..++-.|.+ ......-..+-.|+.||..+++...+++-.
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~~-~~~~~~~~~~------v~~v~~~p~~-~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~ 228 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEGP-ILAGYPLSSP------GISVQFRPSN-PNQLIVGERNGNIRIFDWTLNLSAEENSQT 228 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTEE-EEEEEECSSC------EEEEEEETTE-EEEEEEEETTSEEEEEETTCCC--------
T ss_pred CEEEEEECCCeEEEEECCCCce-eeeecCCCCC------cEEEEECCCC-CceEEecCCCCEEEEEECCCCccccccccc
Confidence 4677788999999999986532 2233445444 3333322322 223333445667999999999876665433
Q ss_pred ccccCCCC----cccccccccccccCceeeeEeee---cceEEEecceeEEEEEecCcceeeeeecccccceeE
Q psy10905 105 KLVPCSES----LQSICIEEPLRQDQCHVTSVCIL---DTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTA 171 (219)
Q Consensus 105 kl~PcSEs----l~si~iee~l~~~~~qVtaL~~~---~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~ 171 (219)
...-.... ........+.......|.++... +.+|+-|..-|-+.+-+..+-+....+..+..++..
T Consensus 229 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~ 302 (393)
T 4gq1_A 229 ELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGP 302 (393)
T ss_dssp --CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------
T ss_pred CCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCcccc
Confidence 21111000 00000001112234556677654 367888887788888776665555555555444443
No 169
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=81.02 E-value=18 Score=29.37 Aligned_cols=93 Identities=10% Similarity=0.207 Sum_probs=54.3
Q ss_pred ceeeecccC------CcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceee
Q psy10905 25 GELWCGESD------GNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIV 98 (219)
Q Consensus 25 ~eLW~G~~~------g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~ 98 (219)
..||...+. ++|.+|+++++.++....+....+-. ..-|+. .....+|.... .-|+.|+.+ ++.+
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~----pdgi~~--d~~G~lwv~~~--~gv~~~~~~-g~~~ 270 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL----PDGFCV--DRGGWLWSSSG--TGVCVFDSD-GQLL 270 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC----CCSEEE--CTTSCEEECCS--SEEEEECTT-SCEE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC----CCeEEE--CCCCCEEEecC--CcEEEECCC-CCEE
Confidence 568888775 78999999876655444433222111 112332 12234888873 349999985 5555
Q ss_pred eeeeccccccCCCCcccccccccccccCceeeeEee--ecceEEEecceeEE
Q psy10905 99 NKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--LDTCLYIGTTWGCI 148 (219)
Q Consensus 99 ~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~~~~LYIGTtwG~i 148 (219)
.+++... .++.++. .++.|||+|.-|..
T Consensus 271 ~~~~~~~----------------------~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 271 GHIPTPG----------------------TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp EEEECSS----------------------CCCEEEECTTSCEEEEEETTEEE
T ss_pred EEEECCC----------------------ceeEEEEeCCCCEEEEEcCCeEE
Confidence 5554321 2445555 34689999986643
No 170
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=80.69 E-value=28 Score=30.23 Aligned_cols=111 Identities=9% Similarity=0.044 Sum_probs=67.8
Q ss_pred eeecccCCcEEEEEccCCceEeeeeeeccCC------ccccceeEEEeecCCCCceEEEEEe---------CCcEEEEEe
Q psy10905 27 LWCGESDGNISIYTMSEHSVTSHDTVNHFHP------VISNVDVSFLVSSPSTSAWVWSYVY---------PGCSVYQWD 91 (219)
Q Consensus 27 LW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~------~~~~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vyqw~ 91 (219)
+|.. .+|.+++.++..+.......+....+ ..|.. ...++.. .+...+|.... ++..|+..|
T Consensus 228 ~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~~~~~~s-~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 228 VWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGG-WQQVAYL-KSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred EEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCc-eEeEEEC-CCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 4444 46788888886554333233322111 01111 1112222 35567888775 456899999
Q ss_pred cccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cc-eEEEec-ceeEEEEEecCcceeeeee
Q psy10905 92 TQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DT-CLYIGT-TWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 92 ~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~-~LYIGT-twG~iiVaea~tLrPit~f 162 (219)
.+|++++.++..-. +...|++. +. .||++- .-|.|-|.|..+++.+...
T Consensus 305 ~~t~~vv~~i~~g~----------------------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 305 GLVGQTSSQISLGH----------------------DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCEEEEEEECCC----------------------CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 99999999996543 11244444 45 688866 3799999999999987553
No 171
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.39 E-value=23 Score=29.04 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=77.5
Q ss_pred ceeeeeeeec--ceeeecccCCcEEEEEccCCc-----eEeeeee-eccCCccccceeEEEeecCCCCceEEEEEeCCcE
Q psy10905 15 SVLHAITAVP--GELWCGESDGNISIYTMSEHS-----VTSHDTV-NHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCS 86 (219)
Q Consensus 15 ~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~-----vs~~~~l-~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~ 86 (219)
..+.+++.-+ ..|=+|..+|.|.||++.+.. ......+ .|.+ .|..++-.+ +.. .......+..
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~------~V~~v~~sp-~g~-~las~s~D~~ 130 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHEN------EVKGVAWSN-DGY-YLATCSRDKS 130 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----------CEEEEEECT-TSC-EEEEEETTSC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCC------cEEEEEECC-CCC-EEEEEeCCCE
Confidence 3467777655 667788899999999886321 1111112 2322 355565433 222 3334455678
Q ss_pred EEEEecccc-eeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCc--ceeeee
Q psy10905 87 VYQWDTQAR-SIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDS--LRPITV 161 (219)
Q Consensus 87 Vyqw~~~tr-~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~t--LrPit~ 161 (219)
|+.||..+. +....+ + . +.. -...|++++.. +.+|..|..=|.|-+-+..+ .+++..
T Consensus 131 v~iwd~~~~~~~~~~~---~---------~--~~~----h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 131 VWIWETDESGEEYECI---S---------V--LQE----HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAV 192 (330)
T ss_dssp EEEEECCTTCCCCEEE---E---------E--ECC----CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEEeccCCCCCeEEE---E---------E--ecc----CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEE
Confidence 999998432 211100 0 0 122 23457788775 36777777778888877544 478999
Q ss_pred ecccccceeEEe
Q psy10905 162 FRPYEELVTAIL 173 (219)
Q Consensus 162 frp~e~~V~~Ii 173 (219)
++.|.+.|.++-
T Consensus 193 ~~~h~~~v~~~~ 204 (330)
T 2hes_X 193 LNGHEGTVWSSD 204 (330)
T ss_dssp ECCCSSCEEEEE
T ss_pred ccCCCCcEEEEE
Confidence 999999998865
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.74 E-value=21 Score=28.35 Aligned_cols=98 Identities=12% Similarity=0.179 Sum_probs=58.6
Q ss_pred ceeeecccCCcEEEEEcc-CCce-EeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeee
Q psy10905 25 GELWCGESDGNISIYTMS-EHSV-TSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~-~~~v-s~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
.-||++..+++|.+|+++ ++.+ +....+ ..... ....|+.. ....+|... +..|+.||.+ ++.+.++.
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~----~p~~i~~d--~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPG----KTDGLRVD--AGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSS----CCCSEEEB--TTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCC----CCCeEEEC--CCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 567888888999999997 4566 433333 22221 12234421 223599988 7789999987 45444443
Q ss_pred ccccccCCCCcccccccccccccCceeeeEeeec---ceEEEecceeEEEEEecCc
Q psy10905 103 CSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD---TCLYIGTTWGCIVVAEKDS 155 (219)
Q Consensus 103 ~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~---~~LYIGTtwG~iiVaea~t 155 (219)
.. .. +++++..+ ..|||+|.-| |.-++..+
T Consensus 254 ~~--------------------~~--~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 254 TP--------------------QT--TSNLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp CS--------------------SC--CCEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred CC--------------------CC--ceeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 21 11 66666632 4799999855 44555433
No 173
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=79.58 E-value=19 Score=27.74 Aligned_cols=111 Identities=11% Similarity=0.053 Sum_probs=65.3
Q ss_pred eeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce
Q psy10905 18 HAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS 96 (219)
Q Consensus 18 ~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~ 96 (219)
+++++-. ..||.+..+++|.+|+.+...+.... ... ......|+..+ ...+|..-..+..|+.|+..+.+
T Consensus 70 ~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~-~~~------~~~p~~i~~~~--~g~l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP-FDG------LNYPEGLAVDT--QGAVYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp CCEEECTTCCEEEEETTTEEEEECTTCSCCEECC-CCS------CSSEEEEEECT--TCCEEEEEGGGTEEEEECTTCCS
T ss_pred ceeEECCCCCEEEEcCCCEEEEEeCCCceEeeee-cCC------cCCCcceEECC--CCCEEEEECCCCEEEEEECCCce
Confidence 4555543 56999877889999987754433211 001 11344555322 23488887777788999766544
Q ss_pred eeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecce-eEEEEEecCccee
Q psy10905 97 IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTW-GCIVVAEKDSLRP 158 (219)
Q Consensus 97 I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtw-G~iiVaea~tLrP 158 (219)
.... + . .....+.+|++. ++.|||++.. |.|.+.+..+-..
T Consensus 141 ~~~~-------~----------~----~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 141 QTVL-------P----------F----TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CEEC-------C----------C----CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred eEee-------c----------c----ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 3211 0 0 112234567765 3679999864 6888888766443
No 174
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=79.21 E-value=25 Score=28.80 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=78.6
Q ss_pred Cceeeeeeeec--ceeeecccCCcEEEEEccCCceEe-eeeeeccCCccccceeEEEeecCCCC--------ceEEEEEe
Q psy10905 14 SSVLHAITAVP--GELWCGESDGNISIYTMSEHSVTS-HDTVNHFHPVISNVDVSFLVSSPSTS--------AWVWSYVY 82 (219)
Q Consensus 14 ~~~i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~-~~~l~h~~~~~~~~~V~~L~~~~~~~--------~~Vwsyv~ 82 (219)
...+.++++-+ ..|-+|..+|.|.+|++....... ...-.|.+ .|..+.-.+... ........
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD------WVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS------CEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc------eeeeeeeccccccccccCCCCCEEEEEc
Confidence 44467777665 789999999999999987432211 11112322 244443222110 01333445
Q ss_pred CCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecceeEEEEEecCc-ceee
Q psy10905 83 PGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWGCIVVAEKDS-LRPI 159 (219)
Q Consensus 83 pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG~iiVaea~t-LrPi 159 (219)
.+..|+.||.. .+....+ +. -...|++++... .+|..|..-|.|.+-|... -.|.
T Consensus 192 ~d~~i~iwd~~-~~~~~~~-----------------~~----h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 192 WDGRLKVWNTN-FQIRYTF-----------------KA----HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp TTSEEEEEETT-TEEEEEE-----------------EC----CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred CCCEEEEEcCC-CceeEEE-----------------cC----ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 56789999943 3332221 12 234578888754 5788888899999999743 3454
Q ss_pred eeecccccceeEEeeec-CeEEEec
Q psy10905 160 TVFRPYEELVTAILPLG-GDIVTIG 183 (219)
Q Consensus 160 t~frp~e~~V~~Ii~l~-g~l~TiG 183 (219)
..+ ++...|.++.--+ |.+++.|
T Consensus 250 ~~~-~~~~~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 250 REF-DAGSTINQIAFNPKLQWVAVG 273 (343)
T ss_dssp EEE-ECSSCEEEEEECSSSCEEEEE
T ss_pred eee-cCCCcEEEEEECCCCCEEEEE
Confidence 444 3344566554222 3444444
No 175
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.17 E-value=24 Score=28.72 Aligned_cols=134 Identities=7% Similarity=0.107 Sum_probs=76.8
Q ss_pred eeeeeec--ceeeecc-cCCcEEEEEccCCc-------eEee---eeeeccCCccccceeEEEeecCCCCceEEEEEeCC
Q psy10905 18 HAITAVP--GELWCGE-SDGNISIYTMSEHS-------VTSH---DTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG 84 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~-~~g~Isi~~l~~~~-------vs~~---~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg 84 (219)
+++++-+ ..|++.. .++.|.+|+++.+. +... ....... +....+++-++ +...+|..-+.+
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~sp-dg~~l~v~~~~~ 232 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP----GSGPRHLIFNS-DGKFAYLINEIG 232 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT----TCCEEEEEECT-TSSEEEEEETTT
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC----CCCCeEEEEcC-CCCEEEEEcCCC
Confidence 4455544 5677654 47899999988543 4322 1111111 12345565444 555688887778
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecce--eEEEEEec----Ccc
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTW--GCIVVAEK----DSL 156 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtw--G~iiVaea----~tL 156 (219)
..|+.||.+++++...-.... .| .......++++. +.+||+.... +.|-|.+. .++
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~-~~---------------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~ 296 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAA-DT---------------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL 296 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEES-CS---------------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE
T ss_pred CeEEEEEecCCceEEeEEEec-CC---------------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE
Confidence 899999999886643322221 11 111223566664 4679997765 66777543 367
Q ss_pred eeeeeecccccceeEEe
Q psy10905 157 RPITVFRPYEELVTAIL 173 (219)
Q Consensus 157 rPit~frp~e~~V~~Ii 173 (219)
+++..+.. ...++.+.
T Consensus 297 ~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 297 TKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEC-SSCCCEEE
T ss_pred EEeeEecC-CCCCceEE
Confidence 77776655 44555543
No 176
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=78.89 E-value=29 Score=31.61 Aligned_cols=104 Identities=6% Similarity=-0.056 Sum_probs=68.5
Q ss_pred CcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEe---------CCcEEEEEecccceeeeeeecc
Q psy10905 34 GNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVY---------PGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 34 g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
|.|+|+++....+...-.+-. .+ .++-++ +...+|..-+ .+-.|..+|..|+++..++.+-
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-------~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-------LP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-------SC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECCCCEEEEEEECCC-------CC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 689999998887775555421 23 454433 5667887764 4568999999999999999874
Q ss_pred --c-cccCCCCcccccccccccccCceeeeEeeecceEEEecc--eeEEEEEecCcceeeeee
Q psy10905 105 --K-LVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT--WGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 105 --k-l~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt--wG~iiVaea~tLrPit~f 162 (219)
| .+. ... .+=-++.-.+.+|||.-. -+.|.|.|..+++-+..+
T Consensus 169 g~~r~~~-g~~--------------P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 169 DAPRFLV-GTY--------------QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp TCCCCCB-SCC--------------GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred Ccccccc-CCC--------------cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 1 000 001 111133335689999753 578999999998766543
No 177
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=78.59 E-value=23 Score=28.10 Aligned_cols=112 Identities=12% Similarity=0.102 Sum_probs=68.3
Q ss_pred eeeeeec--ceeeeccc-CCc-EEEEEccCCc-eEee--eeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 18 HAITAVP--GELWCGES-DGN-ISIYTMSEHS-VTSH--DTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~~-~g~-Isi~~l~~~~-vs~~--~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
+++++-+ ..|+.... ++. |.+|+++.+. +... ..+.+ +.....++-++ +...+|..-..+..|+.|
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~ 203 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG------GTRPFNITFTP-DGNFAFVANLIGNSIGIL 203 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS------SSSEEEEEECT-TSSEEEEEETTTTEEEEE
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC------CCCccceEECC-CCCEEEEEeCCCCeEEEE
Confidence 4555544 45776644 478 9999998543 3322 22211 12245554333 455688888888999999
Q ss_pred eccccee---eeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecc-eeEEEEEecCccee
Q psy10905 91 DTQARSI---VNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTT-WGCIVVAEKDSLRP 158 (219)
Q Consensus 91 ~~~tr~I---~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTt-wG~iiVaea~tLrP 158 (219)
|.+++++ +.+++.. ..+.+++.. +.+||+... -+.|.+.|..+-+.
T Consensus 204 d~~~~~~~~~~~~~~~~----------------------~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 204 ETQNPENITLLNAVGTN----------------------NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp ECSSTTSCEEEEEEECS----------------------SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred ECCCCcccceeeeccCC----------------------CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 9999988 4444311 223345554 456888764 67788888766544
No 178
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=78.19 E-value=38 Score=31.34 Aligned_cols=61 Identities=7% Similarity=-0.050 Sum_probs=46.9
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
-.||-||.+|++++-+.+... | . .-+++...++.+|+|+.-|.|.++|+.|-+.+--|+.
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~--~----------------~--~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKF--A----------------A--WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESS--C----------------C--CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECCCCCEEEEecCCC--C----------------c--cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 579999999999988876532 1 0 0124555679999999999999999999988877764
Q ss_pred c
Q psy10905 165 Y 165 (219)
Q Consensus 165 ~ 165 (219)
-
T Consensus 504 ~ 504 (571)
T 2ad6_A 504 P 504 (571)
T ss_dssp S
T ss_pred C
Confidence 3
No 179
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=77.45 E-value=53 Score=31.81 Aligned_cols=131 Identities=16% Similarity=0.147 Sum_probs=85.3
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCce------EeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSV------TSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~v------s~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
++++|.=+ .-|=.|..+|.|.||+++++.+ .-...-.|+.. ..-.|..++-+| ++ -.+..-+-.||
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g--h~~~V~sVawSP---dg-Laass~D~tVr 205 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAG--SKDWVTHIVWYE---DV-LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTT--CCCCEEEEEEET---TE-EEEEETTCCEE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccc--ccccEEEEEEcC---Cc-EEEEeCCCeEE
Confidence 67777655 8888999999999999998753 11222122221 012466665433 22 45556688999
Q ss_pred EEecccceee---eeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeeccc
Q psy10905 89 QWDTQARSIV---NKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPY 165 (219)
Q Consensus 89 qw~~~tr~I~---~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~ 165 (219)
.||.+++++. .+| . ...+-+|.+++.++..|-++ ..|-|-+-+..+-+..+....|
T Consensus 206 lWd~~~~~~~~~~~tL-----------------~---~~h~~~V~svaFsg~~LASa-~~~tIkLWd~~~~~~~~~~~gh 264 (588)
T 2j04_A 206 SMTVSASSHQPVSRMI-----------------Q---NASRRKITDLKIVDYKVVLT-CPGYVHKIDLKNYSISSLKTGS 264 (588)
T ss_dssp EECCCSSSSCCCEEEE-----------------E---CCCSSCCCCEEEETTEEEEE-CSSEEEEEETTTTEEEEEECSC
T ss_pred EEECCCCccccceeee-----------------c---ccccCcEEEEEEECCEEEEE-eCCeEEEEECCCCeEEEEEcCC
Confidence 9999988732 111 1 12345788888885444444 5699999998888886666579
Q ss_pred ccceeEEeee
Q psy10905 166 EELVTAILPL 175 (219)
Q Consensus 166 e~~V~~Ii~l 175 (219)
.+.|..| ++
T Consensus 265 ~~~V~~v-a~ 273 (588)
T 2j04_A 265 LENFHII-PL 273 (588)
T ss_dssp CSCCCEE-EE
T ss_pred CceEEEE-Ee
Confidence 9888884 66
No 180
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=77.21 E-value=28 Score=31.09 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=67.8
Q ss_pred ceeeeccc-CCcEEEEEccCC-ceEeeeeeeccCCccccceeEEEeecCCCC--ceEEEEEeCC-cEEEEEeccc--cee
Q psy10905 25 GELWCGES-DGNISIYTMSEH-SVTSHDTVNHFHPVISNVDVSFLVSSPSTS--AWVWSYVYPG-CSVYQWDTQA--RSI 97 (219)
Q Consensus 25 ~eLW~G~~-~g~Isi~~l~~~-~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~--~~Vwsyv~pg-~~Vyqw~~~t--r~I 97 (219)
..|+...+ .++|.+|+++++ .++..+.+.. + ..---|+. +. -.+|++..|+ ..|.+|+.+. ...
T Consensus 233 ~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~--~----g~PDGi~v---D~e~G~lwva~~~~g~~v~~~~P~~~~~s~ 303 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKHANWTLTPLRVLSF--D----TLVDNISV---DPVTGDLWVGCHPNGMRIFFYDAENPPGSE 303 (355)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC--S----SEEEEEEE---CTTTCCEEEEEESCHHHHHSCCTTSCCCEE
T ss_pred CEEEEEeCCCCeEEEEEECCCCcEecCEEEeC--C----CCCceEEE---eCCCCcEEEEecCCceEEEEECCCCCCCCE
Confidence 57777664 578999999854 5665554422 1 12233442 32 3699977644 6777777763 344
Q ss_pred eeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEe
Q psy10905 98 VNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAE 152 (219)
Q Consensus 98 ~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVae 152 (219)
..|+.-. -+|..+...+-+.=+.....+|.....+++||||+.-.=++.+|
T Consensus 304 v~rI~~~----~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGsv~~~~l~c~ 354 (355)
T 3sre_A 304 VLRIQDI----LSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGTVFHKALYCD 354 (355)
T ss_dssp EEEEECT----TSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEESSSCEEEEE
T ss_pred EEEEEcc----CCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEEcCCCceecc
Confidence 4444421 23444433332222344456666667889999999777666655
No 181
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=76.21 E-value=34 Score=28.86 Aligned_cols=152 Identities=13% Similarity=0.093 Sum_probs=73.0
Q ss_pred eCCCceeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCC---cc------c----------cceeEEEe
Q psy10905 11 LGASSVLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHP---VI------S----------NVDVSFLV 68 (219)
Q Consensus 11 lg~~~~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~---~~------~----------~~~V~~L~ 68 (219)
++-...+.+++.-+ ..|-.|..+|.|.+|+++........ ..++.. .+ + .-.+..+.
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN-SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc-cccCCcccceEEecccccceeeeecccccccceeee
Confidence 33344466777765 57999999999999999865332111 001100 00 0 00111111
Q ss_pred ecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc-------ccccCCCCcccccccccccccCceeeeEee-ecceEE
Q psy10905 69 SSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS-------KLVPCSESLQSICIEEPLRQDQCHVTSVCI-LDTCLY 140 (219)
Q Consensus 69 ~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s-------kl~PcSEsl~si~iee~l~~~~~qVtaL~~-~~~~LY 140 (219)
-.+.+...+.+ ...+-.+..||..+++...++... .+.|..+.+.+ ....+.++.. ..+.+|
T Consensus 262 ~~~~dg~~l~s-~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 262 WIGSDGSGILA-MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL---------FPSLLGACPHPRYMDYF 331 (393)
T ss_dssp EETTTTCEEEE-ECTTSEEEEEEC-------------------CCSCSEEEECS---------SCCSSCCEECSSCTTEE
T ss_pred eecCCCCEEEE-EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc---------cCcceeEEEccCCCCEE
Confidence 01122333433 344667899999998877766432 12222211111 1111112211 113444
Q ss_pred E--ecceeEEEEEecCcceeeeeecccccceeEEe
Q psy10905 141 I--GTTWGCIVVAEKDSLRPITVFRPYEELVTAIL 173 (219)
Q Consensus 141 I--GTtwG~iiVaea~tLrPit~frp~e~~V~~Ii 173 (219)
+ |..-|.|-+-+..+-+++..+..+.+.|+++.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~sva 366 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFC 366 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEE
Confidence 3 55578999999999999999999999988754
No 182
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=75.74 E-value=30 Score=27.92 Aligned_cols=139 Identities=11% Similarity=0.156 Sum_probs=78.9
Q ss_pred eeeeeeec-ceeeecc-cCCcEEEEEcc-CCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc
Q psy10905 17 LHAITAVP-GELWCGE-SDGNISIYTMS-EHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ 93 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~-~~g~Isi~~l~-~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~ 93 (219)
++++++-+ .+|++.. .+++|.+|+++ ++.+.....+.... +....+++-++ +...+|..-..+..|+.|+.+
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~----g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA----GFGPRHLVFSP-DGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT----TCCEEEEEECT-TSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC----CCCCceEEECC-CCCEEEEEeCCCCEEEEEEec
Confidence 34455444 3377654 46789999998 45555433332211 11234555444 455677777777777777766
Q ss_pred --cceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec--ceEEEecc-eeEEEEEecC---cceeeeeeccc
Q psy10905 94 --ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTT-WGCIVVAEKD---SLRPITVFRPY 165 (219)
Q Consensus 94 --tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTt-wG~iiVaea~---tLrPit~frp~ 165 (219)
++++...-.... .|.. ......+.++++.. .+||+... -+.|.+.+.. +++++..+..+
T Consensus 218 ~~~g~~~~~~~~~~-~~~~------------~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~ 284 (347)
T 3hfq_A 218 TQTGAFTQLGIVKT-IPAD------------YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE 284 (347)
T ss_dssp TTTTEEEEEEEEES-SCTT------------CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS
T ss_pred CCCCceEEeeeeee-cCCC------------CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC
Confidence 465433222211 1211 11234677777764 57988665 5777777754 77777777665
Q ss_pred ccceeEEe
Q psy10905 166 EELVTAIL 173 (219)
Q Consensus 166 e~~V~~Ii 173 (219)
...++.|.
T Consensus 285 ~~~~~~~~ 292 (347)
T 3hfq_A 285 GDFPRDFD 292 (347)
T ss_dssp SSCCCEEE
T ss_pred CCCcCeEE
Confidence 55566554
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=75.26 E-value=37 Score=28.76 Aligned_cols=105 Identities=7% Similarity=0.031 Sum_probs=67.9
Q ss_pred cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEe---------CCcEEEEEecccceeeeeee
Q psy10905 32 SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVY---------PGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 32 ~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vyqw~~~tr~I~~~LD 102 (219)
.+|.|++|+..+..+...-.. ...+ +++-++ +...+|+.-+ .+-.|..||.+|.++..++.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~-------g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~ 98 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPT-------AFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS 98 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEEC-------CEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecC-------CCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE
Confidence 467999998887766532111 1223 555444 5667888764 34579999999999999987
Q ss_pred ccccccCCCCcccccccccccccCceeeeEee--ecceEEEecc--eeEEEEEecCcceeeee
Q psy10905 103 CSKLVPCSESLQSICIEEPLRQDQCHVTSVCI--LDTCLYIGTT--WGCIVVAEKDSLRPITV 161 (219)
Q Consensus 103 ~skl~PcSEsl~si~iee~l~~~~~qVtaL~~--~~~~LYIGTt--wG~iiVaea~tLrPit~ 161 (219)
+-. .. . ........+++ .+.+||++-- -+.|-|.|..+.+.+..
T Consensus 99 ~~~---~~-----------~-~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 99 LPP---KR-----------V-QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp ECT---TB-----------C-CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cCc---cc-----------c-ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 642 00 0 01112234444 4689999863 58899999999887765
No 184
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=69.94 E-value=38 Score=26.55 Aligned_cols=114 Identities=5% Similarity=0.063 Sum_probs=66.6
Q ss_pred eeeeeec-ceeeecc-cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCc-EEEEEeccc
Q psy10905 18 HAITAVP-GELWCGE-SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGC-SVYQWDTQA 94 (219)
Q Consensus 18 ~s~a~v~-~eLW~G~-~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~-~Vyqw~~~t 94 (219)
..+++=. -+||... .+++|.+|+.+...+.... .... ......++..+ ...+|..-..+- .|+.||.+.
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~---~~g~---~~~p~~i~~d~--~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIG---GEGI---TNYPIGVGINS--NGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEES---CTTT---SCSEEEEEECT--TCCEEEEECSSSCEEEEECTTS
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEc---cCCc---cCCCcEEEECC--CCCEEEEeCCCCEEEEEECCCC
Confidence 4555443 6799875 4789999987654333211 1000 01234455322 235888887764 999999654
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecceeEEEEEecCcceee
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWGCIVVAEKDSLRPI 159 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG~iiVaea~tLrPi 159 (219)
+.+..+... .....+.++++. +++|||...-+.|.|.+-....|+
T Consensus 239 -~~~~~~~~~-------------------~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 239 -QLISALESK-------------------VKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp -CEEEEEEES-------------------SCCSCEEEEEEETTTEEEEEETTTEEEEEECSCCCCT
T ss_pred -CEEEEEccc-------------------CCCCcceeEEECCCCcEEEECCCCeEEEEEccccccc
Confidence 444444221 011234567765 368999876678888887776665
No 185
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=69.36 E-value=9.8 Score=32.67 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=62.4
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
..|.+|..+|.|..++.+++.+.+......... ++ + +...|++.- .+-.||.||.+|++++-+++..
T Consensus 93 ~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~---------~~--p-~~~~v~~~~-~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLTGEKQQTLSSAFADS---------LS--P-STSLLYLGR-TEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp --CCCCEEEEEEEEECCC----------------------------------EEEEE-EEEEEECCCSSSSSCCCEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEecCCCccc---------cc--c-cCCEEEEEe-cCCEEEEEECCCCCEEEeEecc
Confidence 567888888889999888776655433321111 11 1 233355443 2457999999999988887643
Q ss_pred ccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecccccceeEEeee
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPL 175 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l 175 (219)
.. .+..+.. .. ..++.+|+|+.-|.|...|+.+=+.+--++ +...+-.+..+
T Consensus 160 ~~-------~~~~~~~-----~~------~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~ 211 (369)
T 2hz6_A 160 DY-------AASLPED-----DV------DYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVW 211 (369)
T ss_dssp EE-------CCBCCCC-----CT------TCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEEC
T ss_pred cc-------cCccccC-----Cc------cccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEe
Confidence 21 0111111 00 134789999999999999988776655544 44455443333
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=69.29 E-value=39 Score=26.50 Aligned_cols=114 Identities=11% Similarity=-0.041 Sum_probs=64.5
Q ss_pred eeeeeec-ceeeec--------ccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 18 HAITAVP-GELWCG--------ESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 18 ~s~a~v~-~eLW~G--------~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
.+++.-. ..||.+ ..+|+|.+|+++++.+..... ++..-....+..++..+ +...+|.....+ .|+
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---~~~~~~~~~~~~i~~~~-~~g~l~v~~~~~-~l~ 95 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK---PEVNGYGGIPAGCQCDR-DANQLFVADMRL-GLL 95 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC---CEETTEECCEEEEEECS-SSSEEEEEETTT-EEE
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe---cccCCCCCCCceEEEec-CCCcEEEEECCC-CEE
Confidence 3455433 678877 567899999887766642211 10000011344555322 214588887644 799
Q ss_pred EEecccceeeee-eeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecce----------------eEEEE
Q psy10905 89 QWDTQARSIVNK-LDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTW----------------GCIVV 150 (219)
Q Consensus 89 qw~~~tr~I~~~-LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtw----------------G~iiV 150 (219)
.||.+ +++..- .+. .+ .....++.+++.. ++.|||++.. |-|..
T Consensus 96 ~~d~~-g~~~~~~~~~------~~-----------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKD------SE-----------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp EEETT-SCEEECCSBC------TT-----------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred EEeCC-CCEEEEEecc------CC-----------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 99988 776432 211 00 0123456677775 3689999874 67777
Q ss_pred EecC
Q psy10905 151 AEKD 154 (219)
Q Consensus 151 aea~ 154 (219)
.+..
T Consensus 158 ~~~~ 161 (314)
T 1pjx_A 158 FTTD 161 (314)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 7753
No 187
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=67.14 E-value=65 Score=28.20 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=61.2
Q ss_pred eeeeeeeec---ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEec
Q psy10905 16 VLHAITAVP---GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDT 92 (219)
Q Consensus 16 ~i~s~a~v~---~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~ 92 (219)
.+.+++.-+ ..|-+|..+|.|.||+++.... ......|.+ .|..++-.+ +...+.+.- .+-.|+.||.
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~-~~~~~~~~~------~v~~v~wsp-dg~~lasgs-~dg~v~iwd~ 221 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK-VCATLPSTV------AVTSVCWSP-KGKQLAVGK-QNGTVVQYLP 221 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE-EEEEECGGG------CEEEEEECT-TSSCEEEEE-TTSCEEEECT
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc-eeeccCCCC------ceeEEEEcC-CCCEEEEEc-CCCcEEEEcc
Confidence 366666654 4578898999999999997632 222333432 466665444 344455555 4457999998
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEE
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYI 141 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYI 141 (219)
+ ++...++.+.. . .+ ......|++++-..+..|+
T Consensus 222 ~-~~~~~~~~~~~------~-----~~---~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 222 T-LQEKKVIPCPP------F-----YE---SDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp T-CCEEEEECCCT------T-----CC---TTSCEEEEEEEEEETTEEE
T ss_pred C-CcccccccCCc------c-----cC---CCCceeEEEEEEecCceEE
Confidence 7 44444433211 1 01 0124578899988877776
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=64.74 E-value=46 Score=25.62 Aligned_cols=107 Identities=14% Similarity=0.138 Sum_probs=65.4
Q ss_pred eeeeeeec-ceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP-GELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
++++++=. -.||.+.. ++.|.+|+.+ +.+.... .+. ....+..++.. ....+|.....+-.|+.||.+
T Consensus 17 ~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~---~~~---~~~~~~~i~~~--~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKANMISCINLD-GKITEYP---LPT---PDAKVMCLTIS--SDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEE---CSS---TTCCEEEEEEC--TTSCEEEEETTTTEEEEECTT-
T ss_pred ccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEec---CCc---ccCceeeEEEC--CCCCEEEeCCCCCeEEEECCC-
Confidence 56666554 78999976 5889999877 5544222 111 12245566532 233599988877889999986
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecce-eEEEEEec
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTW-GCIVVAEK 153 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtw-G~iiVaea 153 (219)
+++ .++. +| .....+.+|+.. ++.|||++.. |-|.+.+.
T Consensus 87 g~~-~~~~----~~---------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 87 GII-KEYT----LP---------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp SCE-EEEE----CS---------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CcE-EEEe----CC---------------CcCCCceeeEECCCCCEEEEecCCceEEEECC
Confidence 332 2222 12 012356677776 4789998764 56666665
No 189
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=64.10 E-value=98 Score=29.19 Aligned_cols=60 Identities=13% Similarity=0.196 Sum_probs=46.5
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
-.|+-||.+|++++=+..... |-. + .++..-++.+|+||.-|-+.+.|+.|-+++--|+-
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~--~~~------------~------g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVS--PWN------------G------GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESS--SCC------------C------CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEeCCCCcEEeecCCCC--CCc------------C------cceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 568999999999988876421 100 0 24556678999999999999999999999888873
No 190
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=64.09 E-value=85 Score=28.45 Aligned_cols=23 Identities=9% Similarity=0.225 Sum_probs=19.2
Q ss_pred EEeCCcEEEEEecccceeeeeee
Q psy10905 80 YVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 80 yv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
.-.-+..|..||.+|++.+..|.
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEEc
Confidence 34567889999999999988885
No 191
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=62.60 E-value=19 Score=28.58 Aligned_cols=69 Identities=10% Similarity=0.084 Sum_probs=45.4
Q ss_pred cee-eecccCCcEEEEEccCCceE-eeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeee
Q psy10905 25 GEL-WCGESDGNISIYTMSEHSVT-SHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 25 ~eL-W~G~~~g~Isi~~l~~~~vs-~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
..| |+-...++|.+++++..... ....+.+ + .-|+ .+...+|.+-.-+-.|+.+|.++++++.++.
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~--------P-~gi~---~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY--------P-FAVT---SYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEECCCS--------E-EEEE---EETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEecCCCC--------c-eEEE---EeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 456 55555678999988754332 2121212 1 2344 2456788888888899999999999998886
Q ss_pred ccc
Q psy10905 103 CSK 105 (219)
Q Consensus 103 ~sk 105 (219)
..+
T Consensus 247 ~g~ 249 (267)
T 1npe_A 247 PHK 249 (267)
T ss_dssp CSS
T ss_pred ccc
Confidence 544
No 192
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=61.05 E-value=1e+02 Score=28.46 Aligned_cols=123 Identities=6% Similarity=-0.002 Sum_probs=75.8
Q ss_pred eeecceeeeccc-CCcEEEEEc-cCCceEeeeeeeccCC----ccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 21 TAVPGELWCGES-DGNISIYTM-SEHSVTSHDTVNHFHP----VISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 21 a~v~~eLW~G~~-~g~Isi~~l-~~~~vs~~~~l~h~~~----~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
++++-.|.++.. +|.+.-++. +++.+.+...+.-... +|....-+-++ -....|+... .+..||-+|.+|
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~v~~-~dg~l~alD~~t 134 (571)
T 2ad6_A 59 LVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLA---YGAGQIVKKQ-ANGHLLALDAKT 134 (571)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCE---EETTEEEEEC-TTSEEEEEETTT
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccE---EECCEEEEEe-CCCEEEEEECCC
Confidence 344577888877 789999999 7888887765532211 01000000011 1233465543 356899999999
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecc------eeEEEEEecCcceeeeeec
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT------WGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt------wG~iiVaea~tLrPit~fr 163 (219)
++++=+.+..+.-+ ....-++..+.++.+|+|+. -|.|...|+.|=+.+=.+.
T Consensus 135 G~~~W~~~~~~~~~----------------~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 135 GKINWEVEVCDPKV----------------GSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp CCEEEEEECCCGGG----------------TCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEecCCCCCc----------------cceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 99998887654110 00011234456899999998 6899999988776554443
No 193
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=60.55 E-value=91 Score=27.65 Aligned_cols=118 Identities=16% Similarity=0.222 Sum_probs=75.8
Q ss_pred eeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCC--CCceEEEEE-eCCcEEEEEecccceeeeeee
Q psy10905 26 ELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPS--TSAWVWSYV-YPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 26 eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~--~~~~Vwsyv-~pg~~Vyqw~~~tr~I~~~LD 102 (219)
-+-.|-.+|.|.-++.+++.+.+........|+. . ..+++ ....+|..- ...=.||.++.+++..+-++.
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-----~--~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-----E--IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-----E--CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-----E--ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence 3556778999999998888999887775222321 0 11111 122455443 346788999999987766666
Q ss_pred ccccccCCCCcccccccccccccCceeeeEee-------ecceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 103 CSKLVPCSESLQSICIEEPLRQDQCHVTSVCI-------LDTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 103 ~skl~PcSEsl~si~iee~l~~~~~qVtaL~~-------~~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
...++-.| +... =+.--+ .++.+|+|+--|-+..+|+.|=+++-.|+.
T Consensus 85 ~~~lv~~S-------------P~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 85 IRQLVSTS-------------PLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHHHTTC-------------SEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cccceecc-------------cccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 65544211 1100 011112 468999999999999999999998888874
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=59.70 E-value=40 Score=29.23 Aligned_cols=78 Identities=9% Similarity=-0.008 Sum_probs=46.4
Q ss_pred ceeeecc----------cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEe-CCcEEEEEecc
Q psy10905 25 GELWCGE----------SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVY-PGCSVYQWDTQ 93 (219)
Q Consensus 25 ~eLW~G~----------~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~-pg~~Vyqw~~~ 93 (219)
+.||... .++.|++|+++...+...-.+.-......+..-..++-+ .+..++|.+-+ ++..|..+| +
T Consensus 78 ~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~s-pDG~~l~v~n~~~~~~v~viD-~ 155 (373)
T 2mad_H 78 SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANT-PNNADLLFFQFAAGPAVGLVV-Q 155 (373)
T ss_pred CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEEC-CCCCEEEEEecCCCCeEEEEE-C
Confidence 7888864 468899998875554433323100000000011233322 35667887765 568899999 9
Q ss_pred cceeeee-eecc
Q psy10905 94 ARSIVNK-LDCS 104 (219)
Q Consensus 94 tr~I~~~-LD~s 104 (219)
|+++..+ +++-
T Consensus 156 t~~~~~~~i~~~ 167 (373)
T 2mad_H 156 GGSSDDQLLSSP 167 (373)
T ss_pred CCCEEeEEcCCC
Confidence 9999999 8763
No 195
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=58.62 E-value=1.1e+02 Score=27.83 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=70.7
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCC-cc-----c-cceeEEEeecCCCCceEEEEEe---------CCcEEE
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHP-VI-----S-NVDVSFLVSSPSTSAWVWSYVY---------PGCSVY 88 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~-~~-----~-~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vy 88 (219)
..+|.--.+|+++|.++.++.++..+......+ .+ | +.+..-+- .+...+|.... ++-.|.
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s---~dg~rlyVa~~~~~~gthk~~s~~Vs 353 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH---RQSDRIYLLVDQRDEWKHKAASRFVV 353 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE---GGGTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc---CCCCEEEEEecccccccccCCCCEEE
Confidence 455555556888888887766654333221100 00 1 11111122 35567888875 345899
Q ss_pred EEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cc-eEEEec-ceeEEEEEecCcceeeeee
Q psy10905 89 QWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DT-CLYIGT-TWGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 89 qw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~-~LYIGT-twG~iiVaea~tLrPit~f 162 (219)
..|.+|++++.++..-. +..+|++. +. .||+.- .-|.|.|.|..+++.+..+
T Consensus 354 VID~~T~kvv~~I~vg~----------------------~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 354 VLNAETGERINKIELGH----------------------EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEEEEEEE----------------------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCeEEEEEECCC----------------------CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999999999997653 12244444 45 788876 4699999999999986554
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=55.45 E-value=69 Score=24.62 Aligned_cols=107 Identities=13% Similarity=0.144 Sum_probs=65.8
Q ss_pred eeeeeeec-ceeeeccc-CCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEeccc
Q psy10905 17 LHAITAVP-GELWCGES-DGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQA 94 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~-~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~t 94 (219)
.+++++-. ..||.+.. ++.|..++.+ +.+.... + +. .......++..+ ...+|.....+..|+.+|. +
T Consensus 106 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~--~~---~~~~~~~i~~d~--~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 106 PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-L--PN---KGSYPAFITLGS--DNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp EEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-C--SS---TTCCEEEEEECT--TSSEEEEETTTTEEEEECT-T
T ss_pred CccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-C--CC---CCCCceeEEECC--CCCEEEEecCCCeEEEECC-C
Confidence 45555543 77998865 6789988776 4444221 1 11 122345565322 2349998888889999998 6
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecce-eEEEEEec
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTW-GCIVVAEK 153 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtw-G~iiVaea 153 (219)
+++.. +.. | .....+.+|++. ++.|||++.. |.|.+.+.
T Consensus 176 g~~~~-~~~----~---------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 176 GKLEE-YPL----P---------------TNAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp CCEEE-EEC----S---------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CcEEE-eeC----C---------------CCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 65542 221 2 122456777776 4789999864 56888775
No 197
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=51.30 E-value=1.2e+02 Score=27.51 Aligned_cols=105 Identities=13% Similarity=0.100 Sum_probs=57.4
Q ss_pred eEEEeecCCCCceEEEEEe-CC----cEEEEEecccceeeeeeeccccccCCCCcccccccccccccC------ceeeeE
Q psy10905 64 VSFLVSSPSTSAWVWSYVY-PG----CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQ------CHVTSV 132 (219)
Q Consensus 64 V~~L~~~~~~~~~Vwsyv~-pg----~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~------~qVtaL 132 (219)
+..++-++ ++..+.+.-. .| ..|+.||.++++....++.....|..+.|. .++...... ..|+++
T Consensus 39 ~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 39 LMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLS---DEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-----------------------CCEESCCC
T ss_pred CCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhccccccccc---chhhhhhhhhhhccccCccee
Confidence 44444333 5555655555 44 499999999999888887766555443322 222111111 336777
Q ss_pred eeec--ceEEEecceeEEEEEecCcce--eeeeecccccceeEEe
Q psy10905 133 CILD--TCLYIGTTWGCIVVAEKDSLR--PITVFRPYEELVTAIL 173 (219)
Q Consensus 133 ~~~~--~~LYIGTtwG~iiVaea~tLr--Pit~frp~e~~V~~Ii 173 (219)
+.+. .+|+.+.. |.|.+.+..+-+ .+..+..+.+.+..+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~ 158 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAK 158 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEE
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCccccccc
Confidence 7754 56777766 899999876651 2223444555665543
No 198
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=48.94 E-value=44 Score=30.34 Aligned_cols=70 Identities=4% Similarity=-0.138 Sum_probs=35.7
Q ss_pred eeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeee
Q psy10905 27 LWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLD 102 (219)
Q Consensus 27 LW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD 102 (219)
+=.|..++.|.+|+++++.......+..++.... .+. ++..+ ...-..-..+-.|+.||.++++.++.|.
T Consensus 253 laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~--~~l---sg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG--RFL---EGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp -----CCEEEEEEETTTTEEEEEEEECCCTTCCC--CEE---EEEEE-TTEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc--eeE---ccccC-CCEEEEEcCCCcEEEEECCCCcEEEEec
Confidence 3468889999999888765443332222222111 111 00000 0112222345589999999999999874
No 199
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=48.88 E-value=1.8e+02 Score=27.43 Aligned_cols=124 Identities=9% Similarity=-0.060 Sum_probs=78.3
Q ss_pred eeecceeeecccCCcEEEEEccCCceEeeeeeeccCCc----cccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce
Q psy10905 21 TAVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHPV----ISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS 96 (219)
Q Consensus 21 a~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~----~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~ 96 (219)
++++-.|..+..+|.+.-++.+++.+.+...+.-.... |-...-+-++ -....|+... .+..||-+|.+|++
T Consensus 74 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a---~~~~~v~v~~-~dg~l~alD~~tG~ 149 (677)
T 1kb0_A 74 VVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVA---LWKGKVYVGA-WDGRLIALDAATGK 149 (677)
T ss_dssp EEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCE---EETTEEEEEC-TTSEEEEEETTTCC
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCce---EECCEEEEEc-CCCEEEEEECCCCC
Confidence 34457788887788999999988888877655322110 1000001111 1233465543 45689999999999
Q ss_pred eeeeeecc-ccccCCCCcccccccccccccCceeeeEeeecceEEEecc------eeEEEEEecCcceeeeeecc
Q psy10905 97 IVNKLDCS-KLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT------WGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 97 I~~~LD~s-kl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt------wG~iiVaea~tLrPit~frp 164 (219)
++=+.+.. +.-+ ..-..++..+.++.+|||+. -|.|...|+.|=+.+=.+..
T Consensus 150 ~~W~~~~~~~~~~----------------~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 150 EVWHQNTFEGQKG----------------SLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEEETTTTCCS----------------SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEeeecCCcCcCc----------------CcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 99998765 2100 11112244567899999997 69999999988777655543
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=48.63 E-value=1.1e+02 Score=24.98 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=59.6
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeecc
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
.-|.+...+|+|.+|+.+ +++.+..... ..+. .+ .. .....++..-..+..|+.+|.+|++++-++.-.
T Consensus 137 ~~lv~~~~~~~v~~~d~~-G~~~w~~~~~--~~~~---~~--~~---~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPN-GQLLNSVKLS--GTPF---SS--AF---LDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEEECS--SCCC---EE--EE---CTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred CEEEEecCCCEEEEECCC-CCEEEEEECC--CCcc---ce--eE---cCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 445556667888888877 6666655442 1111 01 11 122246666667778999999999999988733
Q ss_pred ccccCCCCcccccccccccccCceeeeEeee-cceEEEeccee
Q psy10905 105 KLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTTWG 146 (219)
Q Consensus 105 kl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTtwG 146 (219)
+ ++. .....++++++. ++.+||+..-|
T Consensus 206 ~------------~~~---~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 206 D------------IEG---VQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp G------------SBS---CCCSEEEEEEECTTSCEEEEEECT
T ss_pred C------------CCC---ccccccccceEcCCCCEEEEeccC
Confidence 2 111 234567777776 47888877544
No 201
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=47.07 E-value=1e+02 Score=24.05 Aligned_cols=113 Identities=7% Similarity=0.021 Sum_probs=61.9
Q ss_pred eeeeeeec-ceeeec-ccCCcEEEEEccCCceEeeeeeeccCC-ccccceeEEEeecCCCCceEEEEEeC-CcEEEEEec
Q psy10905 17 LHAITAVP-GELWCG-ESDGNISIYTMSEHSVTSHDTVNHFHP-VISNVDVSFLVSSPSTSAWVWSYVYP-GCSVYQWDT 92 (219)
Q Consensus 17 i~s~a~v~-~eLW~G-~~~g~Isi~~l~~~~vs~~~~l~h~~~-~~~~~~V~~L~~~~~~~~~Vwsyv~p-g~~Vyqw~~ 92 (219)
..++|+=. .+||.+ ..+++|.+|+.+...+.... .... +-.......++... ....+|..-+- ...|+.||
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~---~~~~~~~~~~~p~~i~~~~-~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFG---ECGKRDSQLLYPNRVAVVR-NSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEEC---CBSSSTTCBSSEEEEEEET-TTTEEEEEECGGGCEEEEEC-
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCCCcEEEEec---ccCCCcccccCceEEEEEc-CCCeEEEEcCCCCCEEEEEC-
Confidence 35555443 678887 45689999987743332221 1110 00011234444211 23468888753 67899999
Q ss_pred ccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee-cceEEEecc-eeEEEEEecC
Q psy10905 93 QARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYIGTT-WGCIVVAEKD 154 (219)
Q Consensus 93 ~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYIGTt-wG~iiVaea~ 154 (219)
.+++...++... ...++.+|++. ++.|||+.. -+.|.+.+..
T Consensus 107 ~~g~~~~~~~~~--------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 107 QYGQFVRKFGAT--------------------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TTSCEEEEECTT--------------------TCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcEEEEecCc--------------------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 555655554321 11234566664 357888754 4677777743
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=46.57 E-value=1.6e+02 Score=26.34 Aligned_cols=126 Identities=12% Similarity=0.004 Sum_probs=78.5
Q ss_pred CCCceeeeeeeec-ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE
Q psy10905 12 GASSVLHAITAVP-GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW 90 (219)
Q Consensus 12 g~~~~i~s~a~v~-~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw 90 (219)
..|. ++.+++ + ..|+.| .+|.|.+|++++-. .....-.| +- .+..+.. .... ...+.-.-.|+.|
T Consensus 86 ~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~-~~~~~~~~-~~-----~v~~i~~---~~p~-~av~~~dG~L~v~ 151 (388)
T 1xip_A 86 EIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEELS-EFRTVTSF-EK-----PVFQLKN---VNNT-LVILNSVNDLSAL 151 (388)
T ss_dssp ECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSSTT-CEEEEEEC-SS-----CEEEEEE---CSSE-EEEEETTSEEEEE
T ss_pred eCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchhhh-ccCcccee-ec-----ceeeEEe---cCCC-EEEEECCCCEEEE
Confidence 3455 788888 7 999999 88999999987543 22222222 11 2333321 1112 3334556689999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcc--eeeeee-cc---
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSL--RPITVF-RP--- 164 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tL--rPit~f-rp--- 164 (219)
|..+++... + ...|+|+|.+...+++|..-|-|.+.....- ++...+ +|
T Consensus 152 dl~~~~~~~------~-------------------~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 152 DLRTKSTKQ------L-------------------AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp ETTTCCEEE------E-------------------EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHH
T ss_pred EccCCcccc------c-------------------cCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCccc
Confidence 999887531 0 1268899999988999999888777754332 224333 22
Q ss_pred -----cccceeEEeeec
Q psy10905 165 -----YEELVTAILPLG 176 (219)
Q Consensus 165 -----~e~~V~~Ii~l~ 176 (219)
++-+|.+|.-++
T Consensus 207 ~~~~~~~~~V~sI~wl~ 223 (388)
T 1xip_A 207 EELPVEEYSPLSVTILS 223 (388)
T ss_dssp HTSCTTTSEEEEEEESS
T ss_pred ccccCCCeeEEEEEEec
Confidence 345577777765
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=45.45 E-value=63 Score=29.06 Aligned_cols=48 Identities=15% Similarity=0.260 Sum_probs=40.7
Q ss_pred eeeEeeecceEEEecceeEEEEEecCcceeeeeecccccceeEEeeecC
Q psy10905 129 VTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRPYEELVTAILPLGG 177 (219)
Q Consensus 129 VtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp~e~~V~~Ii~l~g 177 (219)
|++|+..++.|||| .-|.|-+.|..++.-......|+..|..|-++.+
T Consensus 90 V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p 137 (388)
T 1xip_A 90 VIFVCFHGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN 137 (388)
T ss_dssp EEEEEEETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS
T ss_pred eeEEEECCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC
Confidence 99999977999999 7799999998888766777888888888777763
No 204
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=45.02 E-value=54 Score=31.03 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=52.4
Q ss_pred eEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCcee--eeEeeecceEEEecceeEEEEEec
Q psy10905 76 WVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHV--TSVCILDTCLYIGTTWGCIVVAEK 153 (219)
Q Consensus 76 ~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qV--taL~~~~~~LYIGTtwG~iiVaea 153 (219)
.|+.... ...||-+|.+|++++=+.|... +. +. ....+|.+ .++++.++.+|+|+.-|.|+.+|+
T Consensus 72 ~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~--~~---------~~-~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa 138 (689)
T 1yiq_A 72 VMYTTGP-FSVVYALDARDGRLIWKYDPQS--DR---------HR-AGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDA 138 (689)
T ss_dssp EEEEECG-GGCEEEEETTTCCEEEEECCCC--CG---------GG-GGGCTTCSCCCCCEEETTEEEEECTTSEEEEEET
T ss_pred EEEEEcC-CCeEEEEECCCCceeEEEcCCC--Cc---------cc-cccccccCCCCccEEECCEEEEEccCCEEEEEEC
Confidence 4555443 4569999999999999987643 10 00 01123322 346778899999999999999999
Q ss_pred Ccceeeeeecc
Q psy10905 154 DSLRPITVFRP 164 (219)
Q Consensus 154 ~tLrPit~frp 164 (219)
.|=+++=-+..
T Consensus 139 ~TG~~~W~~~~ 149 (689)
T 1yiq_A 139 KTGQRAWSVDT 149 (689)
T ss_dssp TTCCEEEEEEC
T ss_pred CCCCEeeeecC
Confidence 88877755544
No 205
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=44.53 E-value=94 Score=27.43 Aligned_cols=67 Identities=7% Similarity=-0.086 Sum_probs=49.1
Q ss_pred eEEEEEeCCc----EEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecc-------
Q psy10905 76 WVWSYVYPGC----SVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT------- 144 (219)
Q Consensus 76 ~Vwsyv~pg~----~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt------- 144 (219)
.+|..-.-+- .|+..|.+|++++.+++.-+- | + -++.-.+.+|||+.+
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-P-------------------~-i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S-------------------L-AVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C-------------------E-EEECTTSSCEEEEEEEETTTTS
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCC-C-------------------c-eEECCCCCEEEEEccccccccc
Confidence 4555554443 899999999999999987641 2 1 133335689999974
Q ss_pred ---eeEEEEEecCcceeeeeec
Q psy10905 145 ---WGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 145 ---wG~iiVaea~tLrPit~fr 163 (219)
-+.|-|.|..|++++.-+.
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEE
Confidence 5889999999999887764
No 206
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=44.31 E-value=1.2e+02 Score=24.14 Aligned_cols=122 Identities=13% Similarity=0.159 Sum_probs=61.3
Q ss_pred eeeeeeec-ceeeecccC-------CcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEE
Q psy10905 17 LHAITAVP-GELWCGESD-------GNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVY 88 (219)
Q Consensus 17 i~s~a~v~-~eLW~G~~~-------g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vy 88 (219)
+..+++-+ ..+|.+... +.|..++.+...+... ..+.. ....++-. .+...+|..-...-.|+
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~------~~~~i~~~-~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI--IQNIS------VANGIALS-TDEKVLWVTETTANRLH 207 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE--EEEES------SEEEEEEC-TTSSEEEEEEGGGTEEE
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe--ecCCC------cccceEEC-CCCCEEEEEeCCCCeEE
Confidence 34444433 679998653 4555555444344321 11111 12233322 24445777776677899
Q ss_pred EEeccc-ceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEEecce-eEEEEEecCcceeeeee
Q psy10905 89 QWDTQA-RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTTW-GCIVVAEKDSLRPITVF 162 (219)
Q Consensus 89 qw~~~t-r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTtw-G~iiVaea~tLrPit~f 162 (219)
.||.++ ++....+.-..... .. ....+..|++.. +.|||++.- |.|.+.+.. -+.+..+
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~---------~~-----~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~ 269 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYY---------FT-----GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQI 269 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEE---------CC-----SSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEE
T ss_pred EEEecCCCcCcccccceEEEe---------cC-----CCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEE
Confidence 999864 33322221110000 00 112445677653 689999864 678888763 3334444
No 207
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=42.03 E-value=1.9e+02 Score=29.76 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=50.9
Q ss_pred CcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeee------cceEEEec----------ceeE
Q psy10905 84 GCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL------DTCLYIGT----------TWGC 147 (219)
Q Consensus 84 g~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~------~~~LYIGT----------twG~ 147 (219)
.+.|...|..|.+++.++++.+ .|. |.+++.. +.++-||| +.|.
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~----nE~----------------~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gr 865 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQ----NEY----------------ALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR 865 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCT----TEE----------------EEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEE
T ss_pred eEEEEEEeCCCCeEEEEEeCCC----Ccc----------------eEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceE
Confidence 3556777877777766665553 122 2233321 36788899 6799
Q ss_pred EEEEec--CcceeeeeecccccceeEEeeecCe-EEEecc
Q psy10905 148 IVVAEK--DSLRPITVFRPYEELVTAILPLGGD-IVTIGR 184 (219)
Q Consensus 148 iiVaea--~tLrPit~frp~e~~V~~Ii~l~g~-l~TiG~ 184 (219)
|+|.+- ..|+-+.- .+.+|-|++++++.|. |+.+|+
T Consensus 866 i~vf~v~~~kL~lv~~-~~v~g~v~al~~~~g~Lla~ig~ 904 (1158)
T 3ei3_A 866 IVVFQYSDGKLQTVAE-KEVKGAVYSMVEFNGKLLASINS 904 (1158)
T ss_dssp EEEEEEETTEEEEEEE-EEESSCEEEEEEETTEEEEEETT
T ss_pred EEEEEEECCEEEEEEE-EEcCCcCEEEeeeCCEEEEEcCC
Confidence 999884 45555432 3668889999999983 444443
No 208
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=41.21 E-value=96 Score=28.83 Aligned_cols=71 Identities=13% Similarity=0.208 Sum_probs=48.9
Q ss_pred ceEEEEEeCCcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCcee--eeEeeecceEEEecceeEEEEEe
Q psy10905 75 AWVWSYVYPGCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHV--TSVCILDTCLYIGTTWGCIVVAE 152 (219)
Q Consensus 75 ~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qV--taL~~~~~~LYIGTtwG~iiVae 152 (219)
..|+.....+ .||-+|.+|++++=+.+... |-. . ..+|.+ .++++.++.+|+||.-|.|+-+|
T Consensus 69 g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~--~~~-~-----------~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD 133 (582)
T 1flg_A 69 GVIYVTASYS-RLFALDAKTGKRLWTYNHRL--PDD-I-----------RPCCDVVNRGAAIYGDKVFFGTLDASVVALN 133 (582)
T ss_dssp TEEEEEETTT-EEEEEESSSCCEEEEEECCC--CTT-C-----------CCSSCSCCCCCEEETTEEEEEETTTEEEEEE
T ss_pred CEEEEEcCCC-CEEEEECCCCcEEEEEcCCC--Ccc-c-----------ccccccCCCccEEECCEEEEEeCCCEEEEEE
Confidence 3466655433 39999999999998887653 210 0 012221 35567889999999999999999
Q ss_pred cCcceeee
Q psy10905 153 KDSLRPIT 160 (219)
Q Consensus 153 a~tLrPit 160 (219)
+.|=+++=
T Consensus 134 ~~TG~~~W 141 (582)
T 1flg_A 134 KNTGKVVW 141 (582)
T ss_dssp SSSCCEEE
T ss_pred CCCCCEEe
Confidence 87765553
No 209
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=40.86 E-value=2.4e+02 Score=26.59 Aligned_cols=121 Identities=12% Similarity=0.116 Sum_probs=72.8
Q ss_pred eeecceeeeccc-CCcEEEEEc-cCCceEeeeeeeccCCc----cccceeEEEeecCCCCce----EEEEEeCCcEEEEE
Q psy10905 21 TAVPGELWCGES-DGNISIYTM-SEHSVTSHDTVNHFHPV----ISNVDVSFLVSSPSTSAW----VWSYVYPGCSVYQW 90 (219)
Q Consensus 21 a~v~~eLW~G~~-~g~Isi~~l-~~~~vs~~~~l~h~~~~----~~~~~V~~L~~~~~~~~~----Vwsyv~pg~~Vyqw 90 (219)
++++--|.++.. +|.+.-++. +++...+...+...... |-...-+-++..+ .... |+... .+..||-+
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t-~dg~l~Al 136 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQ-LDGNVAAL 136 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEEC-TTSEEEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEc-CCCEEEEE
Confidence 344577888876 788999999 78888877655432110 0000000011100 1222 55543 35689999
Q ss_pred ecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecc------eeEEEEEecCcceee
Q psy10905 91 DTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTT------WGCIVVAEKDSLRPI 159 (219)
Q Consensus 91 ~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTt------wG~iiVaea~tLrPi 159 (219)
|.+|++++=+.+..+.-+ ....-++-.+.++.+|||++ -|.|...|+.|=+.+
T Consensus 137 Da~TG~~~W~~~~~~~~~----------------~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKV----------------GSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp ETTTCCEEEEEECCCGGG----------------TCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred ECCCCCEEEeecCCCCCc----------------cceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEE
Confidence 999999998877654111 11111234556899999996 789999998765443
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=39.62 E-value=1.1e+02 Score=27.05 Aligned_cols=60 Identities=7% Similarity=-0.087 Sum_probs=43.6
Q ss_pred cEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEe---------CCcEEEEEecccceeeeeeecc
Q psy10905 35 NISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVY---------PGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 35 ~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~---------pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
+|+|++.+...+...-.+-. .+ +++-++ +...+|..-. .+-.|..||..|+++..++..-
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-------~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-------LS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-------TC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred eEEEEECCCCeEEEEEeCCC-------CC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 78899888777776555532 23 454333 5667888873 5688999999999999999763
No 211
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=39.39 E-value=83 Score=29.56 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=47.0
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
-.|+-||..|++++=+.+... | ..-.++..-++.+|+||.-|.|.+.|+.+=+++--|+.
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~--~------------------~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPT--H------------------WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESS--S------------------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ceEEEEeCCCCcEEEEccCCC--C------------------CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 458889999999987776321 1 11146777889999999999999999999888877765
Q ss_pred c
Q psy10905 165 Y 165 (219)
Q Consensus 165 ~ 165 (219)
-
T Consensus 498 ~ 498 (668)
T 1kv9_A 498 Q 498 (668)
T ss_dssp S
T ss_pred C
Confidence 3
No 212
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=38.81 E-value=2.4e+02 Score=26.11 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=46.6
Q ss_pred CcEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeec
Q psy10905 84 GCSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 84 g~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~fr 163 (219)
.-.|+-||..|++++=+.+... |. .=.+|..-++.+|+||.-|.|...|+.|=+.+--|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~--~~------------------~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL--PL------------------WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS--CC------------------CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCC--CC------------------cccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 3578899999999987776421 10 112456668999999999999999999998888777
Q ss_pred c
Q psy10905 164 P 164 (219)
Q Consensus 164 p 164 (219)
-
T Consensus 525 ~ 525 (582)
T 1flg_A 525 T 525 (582)
T ss_dssp C
T ss_pred C
Confidence 5
No 213
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=38.25 E-value=2.5e+02 Score=26.23 Aligned_cols=121 Identities=9% Similarity=0.002 Sum_probs=74.7
Q ss_pred eecceeeecccCCcEEEEEccCCceEeeeeeeccCC-----ccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce
Q psy10905 22 AVPGELWCGESDGNISIYTMSEHSVTSHDTVNHFHP-----VISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS 96 (219)
Q Consensus 22 ~v~~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~-----~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~ 96 (219)
+++--|.++..+|.+..++.+++...+...+.-... .|..+. +-.+ -....|+... .+-.||-+|.+|++
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~v~v~~-~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVN-RGVA---LWGDKVYVGT-LDGRLIALDAKTGK 138 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCC-CCCE---EEBTEEEEEC-TTSEEEEEETTTCC
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCc-cceE---EECCEEEEEc-CCCEEEEEECCCCC
Confidence 444777787778889999888888887765432111 010000 0011 0233465543 35689999999999
Q ss_pred eeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecce------eEEEEEecCcceeeeeec
Q psy10905 97 IVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTW------GCIVVAEKDSLRPITVFR 163 (219)
Q Consensus 97 I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtw------G~iiVaea~tLrPit~fr 163 (219)
++=+.+..+ |.. ....-++-.+.++.+|||+.- |.|...|+.|=+.+=.|+
T Consensus 139 ~~W~~~~~~--~~~--------------~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 139 AIWSQQTTD--PAK--------------PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEEECSC--TTS--------------SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EeeeeccCC--CCC--------------cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999887643 100 000112334568999999874 899999998877766554
No 214
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=36.26 E-value=2e+02 Score=24.33 Aligned_cols=121 Identities=13% Similarity=0.031 Sum_probs=63.4
Q ss_pred ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCC---cEEEEEec--ccceeee
Q psy10905 25 GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPG---CSVYQWDT--QARSIVN 99 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg---~~Vyqw~~--~tr~I~~ 99 (219)
..||+|-..| +.+++-+...-++...-.. ..+..|..|+..+.+...+|.....| ..||..+- +|.+-..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~----~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~ 97 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV----FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEAT 97 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE----STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECS
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc----CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECC
Confidence 5799997655 7777554322233322111 12346777875454566799999765 46776542 2333221
Q ss_pred eeeccccccCCCCcccccccccccccCceeeeEeee----cceEEEecceeEEEEEe-c-Ccceeee
Q psy10905 100 KLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL----DTCLYIGTTWGCIVVAE-K-DSLRPIT 160 (219)
Q Consensus 100 ~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~----~~~LYIGTtwG~iiVae-a-~tLrPit 160 (219)
...-+|... ..+. .....+|.+|+.. .+.||+||.-|-|..-+ . .+-+++.
T Consensus 98 ---~~~~~~~~~-----~~~~--~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 98 ---RPPAFNKAP-----EGET--GRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp ---BCCCCCCCC-----------CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECH
T ss_pred ---ccccCCCcc-----cccc--cccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECc
Confidence 100011000 0000 0023478888886 68999999866666654 2 3445543
No 215
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=35.19 E-value=1.8e+02 Score=23.63 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=60.5
Q ss_pred cEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccce-eeeeeeccccccCCCCc
Q psy10905 35 NISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARS-IVNKLDCSKLVPCSESL 113 (219)
Q Consensus 35 ~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~-I~~~LD~skl~PcSEsl 113 (219)
+|.+++.+++.+.......++.. ...++..+ +. .+|..-...-.|+.||.+.+. .+..+.-. ..|.+.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~------p~gia~d~-~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~-~~~g~~-- 138 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYL------PHGLSIDT-DG-NYWVTDVALHQVFKLDPHSKEGPLLILGRS-MQPGSD-- 138 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSS------EEEEEECT-TS-CEEEEETTTTEEEEECTTCSSCCSEEESBT-TBCCCS--
T ss_pred cEEEEECCCCeEEeccCCCccCC------ceEEEECC-CC-CEEEEECCCCEEEEEeCCCCeEEEEEeccc-CCCCCC--
Confidence 68999887666643222122211 23344322 22 388877777899999987653 33333211 112211
Q ss_pred ccccccccccccCceeeeEeee--cceEEEecc--eeEEEEEecCcceeeeee
Q psy10905 114 QSICIEEPLRQDQCHVTSVCIL--DTCLYIGTT--WGCIVVAEKDSLRPITVF 162 (219)
Q Consensus 114 ~si~iee~l~~~~~qVtaL~~~--~~~LYIGTt--wG~iiVaea~tLrPit~f 162 (219)
+ ....+...+++. ++.|||--+ -+.|.+.+. .=+.+..+
T Consensus 139 -----~----~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~ 181 (329)
T 3fvz_A 139 -----Q----NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQW 181 (329)
T ss_dssp -----T----TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEE
T ss_pred -----c----cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEe
Confidence 1 244567889987 589999875 578888873 33334444
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.94 E-value=2.2e+02 Score=24.61 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=61.9
Q ss_pred eeeeeec-ceeeecc-cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCc-EEEEEeccc
Q psy10905 18 HAITAVP-GELWCGE-SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGC-SVYQWDTQA 94 (219)
Q Consensus 18 ~s~a~v~-~eLW~G~-~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~-~Vyqw~~~t 94 (219)
+.+|+=. .+||... .+++|.+++++.+.+...... .+. +. ++.. .+...+|+.-..+. .||.|+..+
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~-----~~--ia~~-~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKG-----GK--PAVT-KDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCB-----CB--CEEC-TTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred eEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCC-----Cc--eeEe-cCCCcEEEEecCCCceEEEEEcCC
Confidence 3454433 5566654 458999999887666533211 111 11 2222 24445666655554 999999987
Q ss_pred ceeeeeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEecceeEEEEEecCc
Q psy10905 95 RSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGTTWGCIVVAEKDS 155 (219)
Q Consensus 95 r~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGTtwG~iiVaea~t 155 (219)
+....++. ++.+ ....++.++++. ++.||+.-.-|.|...+..+
T Consensus 204 ~~~~~~~g--~~~~---------------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 204 GWAPTRIG--QLGS---------------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp TTCEEEEE--ECCT---------------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT
T ss_pred CceeEEee--eccc---------------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC
Confidence 76544441 1101 022334455554 47888866667787777543
No 217
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=32.48 E-value=2e+02 Score=23.35 Aligned_cols=67 Identities=6% Similarity=-0.041 Sum_probs=42.7
Q ss_pred eeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeec
Q psy10905 26 ELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDC 103 (219)
Q Consensus 26 eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~ 103 (219)
-|.+|..+++|.+++.+++.+.+......... +......+ +.. ++. .-+..|+.||. +++++-+++.
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~------~~~~~~~p-dG~-ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE------CNSVAATK-AGE-ILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCC------CCEEEECT-TSC-EEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCC------CcCeEECC-CCC-EEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 46788889999999988888877666532111 11122111 222 333 23456999999 8999988876
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=32.15 E-value=2.1e+02 Score=23.51 Aligned_cols=77 Identities=13% Similarity=0.178 Sum_probs=47.7
Q ss_pred eeEEEeecCCCCceEEEEEeC-----CcEEEEEecccceeeeeeeccc-cccCCCCcccccccccccccCceeeeEeee-
Q psy10905 63 DVSFLVSSPSTSAWVWSYVYP-----GCSVYQWDTQARSIVNKLDCSK-LVPCSESLQSICIEEPLRQDQCHVTSVCIL- 135 (219)
Q Consensus 63 ~V~~L~~~~~~~~~Vwsyv~p-----g~~Vyqw~~~tr~I~~~LD~sk-l~PcSEsl~si~iee~l~~~~~qVtaL~~~- 135 (219)
.+.-++..+ ...+|..=.- +.+|+.||.+|++++.+++..+ ..+ ....+..+++.
T Consensus 68 ~p~gv~~d~--~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~----------------~~~~~~~v~vd~ 129 (343)
T 2qe8_A 68 TVLGIKSDG--NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITL----------------SNSFVNDLAVDL 129 (343)
T ss_dssp CEEEEEECS--SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSC----------------TTCCCCEEEEET
T ss_pred EeeEEEEcC--CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcc----------------cccccceEEEec
Confidence 455555322 2347764321 4789999999999988887643 111 12344566665
Q ss_pred -cceEEEecc----eeEEEEEecCcce
Q psy10905 136 -DTCLYIGTT----WGCIVVAEKDSLR 157 (219)
Q Consensus 136 -~~~LYIGTt----wG~iiVaea~tLr 157 (219)
++.+||.-+ -+.|+|.+..+-+
T Consensus 130 ~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 130 IHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp TTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred CCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 468999754 5678888865443
No 219
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=31.97 E-value=94 Score=30.13 Aligned_cols=82 Identities=13% Similarity=0.267 Sum_probs=53.8
Q ss_pred eeeeeec--ceee-ecccCCcEEEEEccCC------ceEeee-eeeccCCccccceeEEEeecCCCCceEEEEEeCCcEE
Q psy10905 18 HAITAVP--GELW-CGESDGNISIYTMSEH------SVTSHD-TVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSV 87 (219)
Q Consensus 18 ~s~a~v~--~eLW-~G~~~g~Isi~~l~~~------~vs~~~-~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~V 87 (219)
|++++=+ +.+. +|.-.+.++||+++.. .+.-.+ .+... -.+.--.|++-.+ ++ ..|..+.-++.|
T Consensus 280 hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v---~vG~gP~h~aF~~-dG-~aY~t~~ldsqV 354 (595)
T 1fwx_A 280 HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---ELGLGPLHTAFDG-RG-NAYTSLFLDSQV 354 (595)
T ss_dssp CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC---BCCSCEEEEEECT-TS-EEEEEETTTTEE
T ss_pred eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc---CCCCCcceEEECC-CC-eEEEEEecCCcE
Confidence 4554444 4444 5667889999988832 111111 11111 1245567776544 34 799999999999
Q ss_pred EEEeccc----------ceeeeeeecc
Q psy10905 88 YQWDTQA----------RSIVNKLDCS 104 (219)
Q Consensus 88 yqw~~~t----------r~I~~~LD~s 104 (219)
-+||.++ ++++.++|.-
T Consensus 355 ~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 355 VKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp EEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred EEEEhhHhhhhhcccccceeEEEeecc
Confidence 9999999 8999999984
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=31.87 E-value=1.3e+02 Score=28.45 Aligned_cols=60 Identities=8% Similarity=0.114 Sum_probs=46.9
Q ss_pred cEEEEEecccceeeeeeeccccccCCCCcccccccccccccCceeeeEeeecceEEEecceeEEEEEecCcceeeeeecc
Q psy10905 85 CSVYQWDTQARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILDTCLYIGTTWGCIVVAEKDSLRPITVFRP 164 (219)
Q Consensus 85 ~~Vyqw~~~tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~~~LYIGTtwG~iiVaea~tLrPit~frp 164 (219)
-.|+-||.+|++++=++.... |. .-.+|..-++.+|+||.-|-|.+.|+.|=+.|--|+-
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~--~~------------------~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVT--IF------------------NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESS--SC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeEEEEECCCCCeEeEccCCC--Cc------------------cCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 459999999999998876532 10 0025666789999999999999999999988877763
No 221
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=31.74 E-value=2e+02 Score=22.98 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=64.3
Q ss_pred eeeeccc---CCcEEEEEccCCceEeeee-eeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc-cc--eee
Q psy10905 26 ELWCGES---DGNISIYTMSEHSVTSHDT-VNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ-AR--SIV 98 (219)
Q Consensus 26 eLW~G~~---~g~Isi~~l~~~~vs~~~~-l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~-tr--~I~ 98 (219)
.|++... ++.|.+|+++++.+..... ..|... +..++-++ +...+++.-+.+-.|..|+.. ++ +.+
T Consensus 52 ~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~------p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 52 CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP------PAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC------CSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC------CEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 3887755 5899999997766553333 233322 33344333 556688888788899999986 22 223
Q ss_pred eeeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEEecc-eeEEEEEecC---cceeeeee
Q psy10905 99 NKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYIGTT-WGCIVVAEKD---SLRPITVF 162 (219)
Q Consensus 99 ~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYIGTt-wG~iiVaea~---tLrPit~f 162 (219)
.++....--|. ......++.++++.. ++||+... -|.|.+.+.. ++.++..+
T Consensus 125 ~~~~~~~~~p~------------~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~ 181 (347)
T 3hfq_A 125 DTVQHSGHGPR------------PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVL 181 (347)
T ss_dssp EEEECCCCCSS------------TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred ceeecCCCCCC------------ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeE
Confidence 33222111110 012345677777753 34777543 4556666543 45554433
No 222
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=30.98 E-value=2.9e+02 Score=24.71 Aligned_cols=121 Identities=12% Similarity=0.053 Sum_probs=69.3
Q ss_pred ceeeecc-cCCcEEEEEccCCceEeeeeeec---cCCccccceeEEEeecCCC-CceEEEEEeC-------------CcE
Q psy10905 25 GELWCGE-SDGNISIYTMSEHSVTSHDTVNH---FHPVISNVDVSFLVSSPST-SAWVWSYVYP-------------GCS 86 (219)
Q Consensus 25 ~eLW~G~-~~g~Isi~~l~~~~vs~~~~l~h---~~~~~~~~~V~~L~~~~~~-~~~Vwsyv~p-------------g~~ 86 (219)
+-+|.|- -.|+|.+++.+.+.+... .+.+ +-+ +...+.-|..---+ ...+|....+ ...
T Consensus 25 g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~--~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~ 101 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGD--GEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASS 101 (334)
T ss_dssp TEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSC--CSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCE
T ss_pred CEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCC--CcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCE
Confidence 7889987 479999998875544422 2221 011 12234444420001 2347776664 578
Q ss_pred EEEEecc---cceeeeeeeccccccCCCCcccccccccccccCceeeeEeeec-ceEEE-ecce-eEEEEEecCcc
Q psy10905 87 VYQWDTQ---ARSIVNKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCILD-TCLYI-GTTW-GCIVVAEKDSL 156 (219)
Q Consensus 87 Vyqw~~~---tr~I~~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~~-~~LYI-GTtw-G~iiVaea~tL 156 (219)
|+.+|.. |++.+-..|.+++.+.=+.+. ........-|++.. +-.|| |+-- |.|+..++.-.
T Consensus 102 v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~--------g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 102 FHSFNLPLSENSKPVWSVNFEKVQDEFEKKA--------GKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp EEEEESSCCTTCCCSEEEESHHHHHHHHHHH--------SSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred EEEEcCCcCCCCCEEEEecCccccccccccc--------cccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 9999999 999999999987554200000 00111123344433 67777 6766 78888887654
No 223
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=30.47 E-value=2.2e+02 Score=23.04 Aligned_cols=91 Identities=13% Similarity=0.074 Sum_probs=51.4
Q ss_pred ceeeeccc-CCcEEEEEccC-CceEeeee---eeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeee
Q psy10905 25 GELWCGES-DGNISIYTMSE-HSVTSHDT---VNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVN 99 (219)
Q Consensus 25 ~eLW~G~~-~g~Isi~~l~~-~~vs~~~~---l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~ 99 (219)
..||...+ .++|.+|+++. +.+...+. +.+|+. |+.. .+..+|.+-..+..|+.+|.+ ++++.
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~g---------i~vd--~dG~l~va~~~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDD---------FAFD--VEGNLYGATHIYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSS---------EEEB--TTCCEEEECBTTCCEEEECTT-CCEEE
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCC---------eEEC--CCCCEEEEeCCCCeEEEECCC-CCEEE
Confidence 45766543 46899998875 33322111 223333 3321 222589999988899999976 44321
Q ss_pred eeeccccccCCCCcccccccccccccCceeeeEeee-----cceEEEeccee
Q psy10905 100 KLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL-----DTCLYIGTTWG 146 (219)
Q Consensus 100 ~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~-----~~~LYIGTtwG 146 (219)
+.- ++. ...+.+++++. +++|||.+.-|
T Consensus 247 -~~~--------------~~~----~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 247 -IAQ--------------AEQ----GVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -EEC--------------GGG----TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -Eee--------------ccc----ccCCceEEEEecccCCCCEEEEECCCC
Confidence 110 111 12346777775 27899988644
No 224
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=28.30 E-value=2.2e+02 Score=25.50 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=35.7
Q ss_pred ceeeecccCCcEEEEEcc-CCceEeeeeeeccCCccccceeEE-EeecCCCCceEEEEEeCC----cEEEEEecccce
Q psy10905 25 GELWCGESDGNISIYTMS-EHSVTSHDTVNHFHPVISNVDVSF-LVSSPSTSAWVWSYVYPG----CSVYQWDTQARS 96 (219)
Q Consensus 25 ~eLW~G~~~g~Isi~~l~-~~~vs~~~~l~h~~~~~~~~~V~~-L~~~~~~~~~Vwsyv~pg----~~Vyqw~~~tr~ 96 (219)
.-||.+..+|.+.||.++ ++.. ...+... +..+.. ++-++ +...++..-..+ ..||.||.++++
T Consensus 324 ~~l~~~~~~g~~~l~~~~~~~~~--~~~l~~~-----~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 324 QFIWQSRRDGWNHLYLYDTTGRL--IRQVTKG-----EWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EEEEEECTTSSCEEEEEETTSCE--EEECCCS-----SSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred EEEEEEccCCccEEEEEECCCCE--EEecCCC-----CeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 467888888888888776 2221 1122111 123443 33233 444455444443 499999998876
No 225
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=26.82 E-value=1.7e+02 Score=23.87 Aligned_cols=85 Identities=12% Similarity=0.098 Sum_probs=49.3
Q ss_pred eeeeeec--ceeeecc--cCCcEEEEEccCCceEeeeeeeccCC--ccccceeEEEeecCCCCceEEEEEeCCcEEEEEe
Q psy10905 18 HAITAVP--GELWCGE--SDGNISIYTMSEHSVTSHDTVNHFHP--VISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWD 91 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~--~~g~Isi~~l~~~~vs~~~~l~h~~~--~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~ 91 (219)
..+|+-+ ..||.-. .+++|.+|+.+...+.....-...+. +-.--....++..+ +...+|.+-.-...|+.||
T Consensus 146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp EEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred cEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEE
Confidence 4566553 6777765 47999999854433332211111000 00001133444322 3246999988899999999
Q ss_pred cccceeeeeeec
Q psy10905 92 TQARSIVNKLDC 103 (219)
Q Consensus 92 ~~tr~I~~~LD~ 103 (219)
.++++.+.++..
T Consensus 225 ~~~G~~~~~~~~ 236 (329)
T 3fvz_A 225 TDTKEFVREIKH 236 (329)
T ss_dssp TTTCCEEEEECC
T ss_pred CCCCcEEEEEec
Confidence 999988877753
No 226
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=25.86 E-value=41 Score=24.67 Aligned_cols=20 Identities=30% Similarity=0.368 Sum_probs=13.6
Q ss_pred ceeEEeeecCeEEEeccccc
Q psy10905 168 LVTAILPLGGDIVTIGRGYR 187 (219)
Q Consensus 168 ~V~~Ii~l~g~l~TiG~GyR 187 (219)
++-+-+.=+|+++|||.||-
T Consensus 42 ~~PCrv~~PG~~~Tfg~gy~ 61 (74)
T 1ok0_A 42 EGLCYAVAPGQITTVGDGYI 61 (74)
T ss_dssp BCCCEEECTTCEEEEEECTT
T ss_pred cceeEEeCCCceEEeccccc
Confidence 33333444578999999994
No 227
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=24.67 E-value=2.7e+02 Score=22.33 Aligned_cols=113 Identities=9% Similarity=0.060 Sum_probs=63.6
Q ss_pred eeeeeec--ceeeecc-cCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeC-CcEEEEEecc
Q psy10905 18 HAITAVP--GELWCGE-SDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYP-GCSVYQWDTQ 93 (219)
Q Consensus 18 ~s~a~v~--~eLW~G~-~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~p-g~~Vyqw~~~ 93 (219)
+.+++=+ +.|++.. .++.|.+|+++++.+.....+...... .-....++-++ +...+|..-+- +-.|..|+.+
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~--~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN--AQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC--CCCEEEEEECT-TSSEEEEEECSSSCEEEEEEEC
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC--CCCcccEEECC-CCCEEEEECCCCCCEEEEEEEc
Confidence 4454444 6688765 589999999987766544444322210 11234554333 55567777766 5677777764
Q ss_pred --cceee--eeeeccccccCCCCcccccccccccccCceeeeEeee--cceEEEec-ceeEEEE--EecCc
Q psy10905 94 --ARSIV--NKLDCSKLVPCSESLQSICIEEPLRQDQCHVTSVCIL--DTCLYIGT-TWGCIVV--AEKDS 155 (219)
Q Consensus 94 --tr~I~--~~LD~skl~PcSEsl~si~iee~l~~~~~qVtaL~~~--~~~LYIGT-twG~iiV--aea~t 155 (219)
+++.. .++.. ..++..++.. +..||++. .-|.|.| .|..+
T Consensus 291 ~~~g~~~~~~~~~~----------------------g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 291 ETNGTLTKVGYQLT----------------------GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp TTTCCEEEEEEEEC----------------------SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCcEEEeeEecC----------------------CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 55432 22211 1233456664 46799887 3466666 55443
No 228
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=24.16 E-value=3e+02 Score=22.57 Aligned_cols=78 Identities=13% Similarity=0.247 Sum_probs=44.5
Q ss_pred eeeeeeec--ceeeecc-cCCcEEEEEcc-CCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEE--
Q psy10905 17 LHAITAVP--GELWCGE-SDGNISIYTMS-EHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQW-- 90 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~-~~g~Isi~~l~-~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw-- 90 (219)
.+++++-+ +.|++.. .+++|.+|+++ ++.+.....+..+. .+..+++++-++ +...+|+.-+.+..|..|
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~---~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD---PGDHPRWVAMHP-TGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS---TTCCEEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC---CCCCCCEeEECC-CCCEEEEEECCCCeEEEEEE
Confidence 34444443 5688754 35799999998 56665333332110 122356665444 555677777666666555
Q ss_pred ecccceee
Q psy10905 91 DTQARSIV 98 (219)
Q Consensus 91 ~~~tr~I~ 98 (219)
|.++++..
T Consensus 223 ~~~~g~~~ 230 (365)
T 1jof_A 223 DPATHMPV 230 (365)
T ss_dssp CTTTCCEE
T ss_pred eCCCCcEE
Confidence 55577654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=22.31 E-value=1.9e+02 Score=27.11 Aligned_cols=23 Identities=22% Similarity=0.384 Sum_probs=20.7
Q ss_pred eCCcEEEEEecccceeeeeeecc
Q psy10905 82 YPGCSVYQWDTQARSIVNKLDCS 104 (219)
Q Consensus 82 ~pg~~Vyqw~~~tr~I~~~LD~s 104 (219)
.-|-.|+.||.++|+++.++|+.
T Consensus 225 ~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp HSCCEEEEEETTTTEEEEEEESC
T ss_pred ccCCEEEEEECCCCcEeeEEecC
Confidence 34899999999999999999985
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.98 E-value=3.3e+02 Score=22.32 Aligned_cols=133 Identities=13% Similarity=0.126 Sum_probs=68.7
Q ss_pred eeeeeec-ceeeeccc------CCcEEEEEccCCceEeeeeeeccCCc-cccceeEEEeecCCCCceEEEEEe---CCcE
Q psy10905 18 HAITAVP-GELWCGES------DGNISIYTMSEHSVTSHDTVNHFHPV-ISNVDVSFLVSSPSTSAWVWSYVY---PGCS 86 (219)
Q Consensus 18 ~s~a~v~-~eLW~G~~------~g~Isi~~l~~~~vs~~~~l~h~~~~-~~~~~V~~L~~~~~~~~~Vwsyv~---pg~~ 86 (219)
+.+++=. -.||.-.. .++|.+|+++++.+...-.+. ++. .+...+..++..+ +...+|..-. ..-.
T Consensus 70 ~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~--~~~~~~~~~~~~v~vd~-~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLP--PPITLSNSFVNDLAVDL-IHNFVYISDPAPDDKAA 146 (343)
T ss_dssp EEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECC--TTTSCTTCCCCEEEEET-TTTEEEEEECCSGGGCE
T ss_pred eEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECC--hhhcccccccceEEEec-CCCEEEEEcCccCCCCe
Confidence 4555433 56887432 478999999877654332221 111 1112234454322 2235666654 5678
Q ss_pred EEEEecccceeeeeeecc-ccccCC-------CCcccccccccccccCceeeeEeeec--ceEEEeccee-EEEEEec
Q psy10905 87 VYQWDTQARSIVNKLDCS-KLVPCS-------ESLQSICIEEPLRQDQCHVTSVCILD--TCLYIGTTWG-CIVVAEK 153 (219)
Q Consensus 87 Vyqw~~~tr~I~~~LD~s-kl~PcS-------Esl~si~iee~l~~~~~qVtaL~~~~--~~LYIGTtwG-~iiVaea 153 (219)
|+.||.+++++...++-. ...|-. ..+.+.+-+..+..-...+..|++.. ..||+..+.| .|-..+.
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 999999999887666531 122211 01110000000000112356777764 5799998777 6666664
No 231
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=21.27 E-value=5.1e+02 Score=25.03 Aligned_cols=74 Identities=11% Similarity=0.050 Sum_probs=43.0
Q ss_pred eeeeeeec--ceeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCc-eEEEEEeC--------Cc
Q psy10905 17 LHAITAVP--GELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSA-WVWSYVYP--------GC 85 (219)
Q Consensus 17 i~s~a~v~--~eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~-~Vwsyv~p--------g~ 85 (219)
+.+++.=+ ..|-.+..++.|.+|+++.+.+..... .|..+ +..++-++ ++. .+|..-.. ..
T Consensus 381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-~~~~~------v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER-SREAM------ITDFTISD-NSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSSC------CCCEEECT-TSCEEEEEEEECSSTTCSCCEE
T ss_pred eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc-CCCCC------ccceEECC-CCCeEEEEecCccccccCCCCC
Confidence 44444444 677777788899999998765542211 23222 33333333 333 34444432 36
Q ss_pred EEEEEecccceee
Q psy10905 86 SVYQWDTQARSIV 98 (219)
Q Consensus 86 ~Vyqw~~~tr~I~ 98 (219)
.||.||.+++++.
T Consensus 453 ~i~l~d~~~g~~~ 465 (1045)
T 1k32_A 453 AIHVYDMEGRKIF 465 (1045)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECCCCcEE
Confidence 8999999988743
No 232
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=20.90 E-value=3.5e+02 Score=22.15 Aligned_cols=62 Identities=11% Similarity=0.199 Sum_probs=34.6
Q ss_pred cCCcEEEEEccC-CceEee-eeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecc-cceee
Q psy10905 32 SDGNISIYTMSE-HSVTSH-DTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQ-ARSIV 98 (219)
Q Consensus 32 ~~g~Isi~~l~~-~~vs~~-~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~-tr~I~ 98 (219)
.+|.+.+|+++. +.+... ..+.|.+. ..+..++-++ +...+++.-.-.-.|+.||.+ ++++.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQEN----TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTT----CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCC----CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 578999999984 444422 22222111 1244444333 444566554445689999988 77653
No 233
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=20.52 E-value=3.3e+02 Score=21.71 Aligned_cols=100 Identities=6% Similarity=-0.028 Sum_probs=57.6
Q ss_pred eeeecccCCcEEEEEccCCceEeeeeeeccCCccccceeEEEeecCCCCceEEEEEeCCcEEEEEecccceeeeeeeccc
Q psy10905 26 ELWCGESDGNISIYTMSEHSVTSHDTVNHFHPVISNVDVSFLVSSPSTSAWVWSYVYPGCSVYQWDTQARSIVNKLDCSK 105 (219)
Q Consensus 26 eLW~G~~~g~Isi~~l~~~~vs~~~~l~h~~~~~~~~~V~~L~~~~~~~~~Vwsyv~pg~~Vyqw~~~tr~I~~~LD~sk 105 (219)
=+|.+-.+|+|..|+.. +.++-. ..+. ..+..++-.+ ...+|..-.-+-.|+.||.+ ++++.-.+-..
T Consensus 59 l~~~d~~~~~i~~~~~~-g~~~~~---~~~~-----~~~~gl~~d~--dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~ 126 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRED-GTVDVL---LDAT-----AFTNGNAVDA--QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA 126 (305)
T ss_dssp EEEEETTTTEEEEEETT-SCEEEE---EESC-----SCEEEEEECT--TSCEEEEETTTTEEEEECTT-SCEEEEECEET
T ss_pred EEEEECCCCEEEEEeCC-CCEEEE---eCCC-----CccceeeECC--CCCEEEEECCCCEEEEECCC-CCEEEEEeccC
Confidence 48999889999999774 343321 1111 1244454322 23488877666789999976 55543222110
Q ss_pred cccCCCCcccccccccccccCceeeeEeee-cceEEE-----ecc-------------eeEEEEEecC
Q psy10905 106 LVPCSESLQSICIEEPLRQDQCHVTSVCIL-DTCLYI-----GTT-------------WGCIVVAEKD 154 (219)
Q Consensus 106 l~PcSEsl~si~iee~l~~~~~qVtaL~~~-~~~LYI-----GTt-------------wG~iiVaea~ 154 (219)
......+..+++. ++.+|+ ||. .|.|...+..
T Consensus 127 -----------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 127 -----------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp -----------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred -----------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 1122344556665 478999 774 3677777763
Done!