Query psy10907
Match_columns 72
No_of_seqs 134 out of 1016
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 21:35:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10907.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10907hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uvj_A Guanylate cyclase solub 99.7 8.7E-18 3E-22 111.8 8.7 68 4-71 28-95 (225)
2 1azs_A VC1; complex (lyase/hyd 99.7 1.4E-17 4.9E-22 111.2 9.5 68 4-71 48-115 (220)
3 2wz1_A Guanylate cyclase solub 99.7 2.4E-17 8.2E-22 109.5 8.4 67 5-71 27-100 (219)
4 3et6_A Soluble guanylyl cyclas 99.7 6.2E-17 2.1E-21 104.3 9.1 67 5-71 24-91 (190)
5 1ab8_A Adenylyl cyclase; lyase 99.7 4.8E-17 1.7E-21 107.8 8.6 63 9-71 37-113 (220)
6 2w01_A Adenylate cyclase; guan 99.7 2.1E-16 7.1E-21 103.6 10.1 68 4-71 28-95 (208)
7 1yk9_A Adenylate cyclase; beta 99.7 2.8E-17 9.5E-22 108.0 2.4 67 5-71 25-91 (204)
8 3r5g_A CYAB; adenylyl cyclase, 99.6 1.4E-15 4.7E-20 98.3 9.3 68 4-71 23-92 (198)
9 1wc3_A Adenylate cyclase; solu 99.6 2.4E-15 8.2E-20 99.6 8.9 67 5-71 42-110 (219)
10 1y10_A Hypothetical protein RV 99.5 2E-14 7E-19 103.7 6.6 60 4-71 229-288 (407)
11 1ybt_A Hydrolase, alpha/beta h 99.4 1.5E-13 5E-18 89.0 5.6 60 5-71 32-91 (184)
12 1fx2_A Receptor-type adenylate 99.4 5.5E-13 1.9E-17 88.3 6.2 58 5-70 27-84 (235)
13 3mr7_A Adenylate/guanylate cyc 99.3 3.1E-11 1E-15 77.7 8.5 59 5-71 22-81 (189)
14 3tek_A Thermodbp-single strand 80.8 1.9 6.5E-05 26.9 3.5 35 11-49 83-122 (148)
15 3a6m_A Protein GRPE, HSP-70 co 78.4 2.7 9.3E-05 26.9 3.9 34 10-43 93-126 (177)
16 1dkg_A Nucleotide exchange fac 76.5 3.5 0.00012 26.8 4.0 33 11-43 117-149 (197)
17 4ani_A Protein GRPE; chaperone 66.0 6.8 0.00023 25.9 3.6 34 10-43 135-168 (213)
18 3t98_B Nucleoporin NUP58/NUP45 50.4 24 0.00082 20.3 3.8 25 6-30 42-66 (93)
19 3i5g_C Myosin catalytic light 47.4 16 0.00054 21.7 2.8 21 6-27 1-21 (159)
20 3epo_A Thiamine biosynthesis p 45.5 10 0.00035 28.9 1.9 24 18-43 350-376 (612)
21 2nps_B Syntaxin 13, vesicle-as 45.1 18 0.00063 19.3 2.6 22 11-32 12-33 (71)
22 3b5n_B Protein SSO1; snare com 44.7 19 0.00064 19.2 2.6 22 11-32 16-37 (69)
23 1gl2_B Syntaxin 7; membrane pr 43.2 21 0.00071 18.8 2.6 22 11-32 15-36 (65)
24 1n7s_B Syntaxin 1A; neuronal s 43.1 21 0.00071 18.9 2.6 22 11-32 18-39 (68)
25 1jth_B Syntaxin 1A; coiled-coi 42.9 20 0.0007 19.4 2.6 22 11-32 16-37 (77)
26 3a43_A HYPD, hydrogenase nicke 41.2 58 0.002 19.6 7.2 49 14-69 4-52 (139)
27 1ylx_A Hypothetical protein AP 39.2 31 0.0011 20.4 3.0 24 15-38 11-34 (103)
28 3mf2_A BLL0957 protein; aminoa 37.4 26 0.0009 24.7 3.0 37 9-45 202-239 (346)
29 1j7q_A CAVP, calcium vector pr 37.2 12 0.00042 19.4 1.0 22 4-26 4-25 (86)
30 1sfc_B Protein (syntaxin 1A), 36.7 29 0.00098 19.1 2.6 22 11-32 27-48 (83)
31 2opo_A Polcalcin CHE A 3; calc 35.9 22 0.00074 18.3 1.9 20 6-26 3-22 (86)
32 3ox6_A Calcium-binding protein 35.3 35 0.0012 18.8 2.9 21 6-27 3-23 (153)
33 1hbk_A ACBP, acyl-COA binding 34.1 2.9 0.0001 23.8 -2.0 18 25-42 25-42 (89)
34 1st7_A ACBP, acyl-COA-binding 32.4 3.1 0.00011 23.5 -2.1 19 25-43 22-40 (86)
35 2bl0_B Myosin regulatory light 31.8 22 0.00075 19.6 1.5 16 7-26 1-16 (145)
36 4h8e_A Undecaprenyl pyrophosph 31.7 96 0.0033 20.9 4.9 42 7-52 83-126 (256)
37 3ugs_B Undecaprenyl pyrophosph 31.6 1.1E+02 0.0039 20.2 5.4 42 7-52 65-108 (225)
38 2lmt_A Calmodulin-related prot 30.9 30 0.001 19.7 2.1 19 7-26 3-21 (148)
39 2cpg_A REPA protein, transcrip 30.7 24 0.00083 16.5 1.4 18 18-35 11-28 (45)
40 2cb8_A Acyl-COA-binding protei 30.7 3.6 0.00012 23.4 -2.0 19 25-43 23-41 (87)
41 2ktg_A Calmodulin, putative; e 30.3 27 0.00091 17.8 1.6 22 4-26 4-25 (85)
42 2vg0_A Short-chain Z-isoprenyl 30.0 88 0.003 20.4 4.5 35 7-42 62-97 (227)
43 2kdx_A HYPA, hydrogenase/ureas 28.8 88 0.003 18.0 6.1 48 14-68 6-53 (119)
44 1bby_A RAP30; average structur 27.8 39 0.0013 18.5 2.0 12 15-26 8-19 (69)
45 1jo0_A Hypothetical protein HI 27.8 64 0.0022 18.5 3.1 22 20-41 33-54 (98)
46 2bez_C E2 glycoprotein; coiled 27.2 43 0.0015 18.8 2.2 15 14-28 61-75 (77)
47 3hd7_B Syntaxin-1A; membrane p 27.0 50 0.0017 19.1 2.6 22 11-32 27-48 (109)
48 2cop_A Acyl-coenzyme A binding 26.8 4.8 0.00016 23.9 -2.0 20 24-43 28-47 (109)
49 3v38_A Carboxypeptidase T; hyd 26.6 51 0.0018 22.5 2.9 27 17-43 12-39 (326)
50 1rq8_A Conserved hypothetical 26.3 87 0.003 18.2 3.5 21 25-45 63-83 (104)
51 1n6z_A Hypothetical 12.3 kDa p 25.6 1.1E+02 0.0037 18.0 4.7 35 12-46 48-84 (105)
52 3i5g_B Myosin regulatory light 25.3 42 0.0014 19.6 2.1 19 7-26 9-27 (153)
53 3u0k_A Rcamp; fluorescent prot 24.8 34 0.0012 24.9 1.8 22 5-27 293-314 (440)
54 3epy_A Acyl-COA-binding domain 24.3 5.5 0.00019 22.7 -2.0 19 25-43 25-43 (89)
55 3kdq_A Uncharacterized conserv 24.3 89 0.0031 19.4 3.5 25 8-32 41-65 (154)
56 2xvc_A ESCRT-III, SSO0910; cel 24.2 56 0.0019 17.4 2.2 14 7-20 36-49 (59)
57 1gxg_A Colicin E8 immunity pro 24.2 69 0.0024 18.0 2.7 22 2-23 4-25 (85)
58 2k53_A A3DK08 protein; NESG, C 23.8 71 0.0024 17.2 2.7 17 6-22 48-64 (76)
59 3oaa_A ATP synthase subunit al 23.2 34 0.0012 25.4 1.6 44 8-51 3-46 (513)
60 2cqu_A Peroxisomal D3,D2-enoyl 23.2 7.3 0.00025 23.4 -1.7 19 25-43 37-55 (116)
61 2bo9_A Carboxypeptidase A4; me 22.7 68 0.0023 21.3 2.9 25 18-42 14-39 (308)
62 2wh5_A Acyl-COA-binding domain 22.7 6.1 0.00021 23.3 -2.1 20 24-43 32-51 (106)
63 2kkm_A Translation machinery-a 22.7 1.1E+02 0.0037 18.7 3.6 28 6-33 43-70 (144)
64 3a4u_B Multiple coagulation fa 22.6 54 0.0019 18.9 2.2 21 6-26 107-127 (143)
65 3fp5_A Acyl-COA binding protei 22.6 6.4 0.00022 23.3 -2.0 19 25-43 29-47 (106)
66 2qv6_A MJ0145, GTP cyclohydrol 22.3 1.9E+02 0.0063 19.5 5.7 43 6-48 148-190 (268)
67 3dgv_A TAFI, carboxypeptidase 21.9 69 0.0024 22.6 2.9 27 17-43 104-131 (401)
68 2lbb_A Acyl COA binding protei 21.9 3.8 0.00013 23.9 -3.1 19 25-43 32-50 (96)
69 3prt_A Carboxypeptidase T; hyd 21.8 73 0.0025 21.4 2.9 27 17-43 12-39 (323)
70 2qe7_A ATP synthase subunit al 21.3 61 0.0021 23.9 2.6 45 8-52 3-47 (502)
71 3dyn_A High affinity CGMP-spec 21.2 61 0.0021 22.4 2.5 61 5-69 26-92 (329)
72 1wdc_C Scallop myosin; calcium 21.1 91 0.0031 17.3 2.9 19 7-26 2-20 (156)
73 3k3v_A Protein SMY2; GYF domai 21.0 49 0.0017 19.3 1.7 21 10-30 70-94 (100)
74 2ck3_A ATP synthase subunit al 20.6 45 0.0015 24.7 1.7 46 7-52 2-47 (510)
75 2ovk_C Myosin catalytic light 20.6 87 0.003 17.5 2.8 18 7-25 2-19 (159)
76 2boa_A Carboxypeptidase A4; me 20.6 77 0.0026 22.1 2.9 26 17-42 109-135 (404)
77 2c1c_A Carboxypeptidase B; ins 20.5 81 0.0028 20.9 2.9 25 18-42 10-35 (312)
78 2dgx_A KIAA0430 protein; RRM d 20.5 97 0.0033 16.4 2.9 28 6-39 19-46 (96)
79 3ezj_A General secretion pathw 20.2 1.6E+02 0.0054 18.7 4.2 29 19-47 55-83 (241)
No 1
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.74 E-value=8.7e-18 Score=111.75 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=65.0
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
-+++++|++++.+||++|+.||.++.+|+++++||+||+|||++|+|.+..+|+.+++++|++|++.+
T Consensus 28 l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~~~~~a~~a~~~al~~~~~~ 95 (225)
T 3uvj_A 28 ICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKESDTHAVQIALMALKMMELS 95 (225)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCCchHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999999999865
No 2
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.74 E-value=1.4e-17 Score=111.24 Aligned_cols=68 Identities=46% Similarity=0.806 Sum_probs=64.6
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
-+++++|++++.+||++|+.||.++.+|+++++||+||+|||++|+|.+..+|+.+++++|++|++.+
T Consensus 48 l~e~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~~a~~Av~~Al~m~~~l 115 (220)
T 1azs_A 48 LASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARADHAHCCVEMGMDMIEAI 115 (220)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSCCSTHHHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCeEEEEECCCCCChHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999998865
No 3
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.72 E-value=2.4e-17 Score=109.51 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=63.3
Q ss_pred hhcCC----HHHHHHHHHHHHHHHHHHHh---hcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 5 EEEVE----EEEKRRMVSGAVVMLTLDLE---ENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 5 ~~~~~----p~evv~~Ln~lf~~FD~l~~---~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
+++++ |++++.+||++|+.||.++. .|+++|+||+||+|||++|+|.+..+|+.+++++|++|++.+
T Consensus 27 ~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~GD~~ma~fg~p~~~~~~a~~A~~~Al~~~~~~ 100 (219)
T 2wz1_A 27 CSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMTVSGLPEPCIHHARSICHLALDMMEIA 100 (219)
T ss_dssp HHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTTCEEECCCTTCEEEEESSSSCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEEEeecCCEEEEEECCCCCChhHHHHHHHHHHHHHHHH
Confidence 46677 99999999999999999999 889999999999999999999999999999999999999875
No 4
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.71 E-value=6.2e-17 Score=104.30 Aligned_cols=67 Identities=18% Similarity=0.278 Sum_probs=64.2
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhc-CceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLDLEEN-QCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l~~~~-~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
+++.+|++++.+||++|+.|+.++.+| |++++|++||+||+++|+|.+..+|+.+++++|++|++.+
T Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~g~~~vk~~GD~~~a~fg~~~~~~~~~~~a~~~al~~~~~~ 91 (190)
T 3et6_A 24 ASRSSPLEVXSLLDELYQRFDAAIEEYPQLYKVETIGDAYMVVCNVTVPCDDHADVLLEFALRMHEEA 91 (190)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHGGGCTTEEEEECTTSCEEEEESSSSCCSTHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeCCEEEEEECCCCCchhHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999 9999999999999999999999999999999999998864
No 5
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=99.70 E-value=4.8e-17 Score=107.84 Aligned_cols=63 Identities=21% Similarity=0.317 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhc---CceEEeeeCCeeeEeeCCCC-----------CCchHHHHHHHHHHHHHHhh
Q psy10907 9 EEEEKRRMVSGAVVMLTLDLEEN---QCMRIKILGDCYYCVSGLPI-----------SRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 9 ~p~evv~~Ln~lf~~FD~l~~~~---~v~KiktiGD~Ym~v~Glp~-----------~~~~ha~~~~~~Al~m~~~i 71 (72)
+|++++.+||++|+.||.++.+| +++|+||+||+|||++|+|. ...+|+.+++++|++|++.+
T Consensus 37 ~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p~~~~~~~~~~~~~~~~~a~~a~~~Al~~~~~l 113 (220)
T 1ab8_A 37 EGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKL 113 (220)
T ss_dssp TTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCCCSCCC--------CCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCCccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999987 89999999999999999997 35789999999999998765
No 6
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=99.69 E-value=2.1e-16 Score=103.63 Aligned_cols=68 Identities=21% Similarity=0.232 Sum_probs=64.5
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
-+++.+|++++.+||++|+.|+.++.+|+.+++||+||+|||++|.|.+..+|+.+++++|++|++.+
T Consensus 28 l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~~a~~Av~~Al~~~~~l 95 (208)
T 2w01_A 28 TSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFMGDGILVLFGAPTSQQDDALRAVACGVEMQLAL 95 (208)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCEEEEEECCCCCChhHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999998764
No 7
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.65 E-value=2.8e-17 Score=107.97 Aligned_cols=67 Identities=21% Similarity=0.398 Sum_probs=64.2
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
+++++|++++.+||++|+.|+.++.+||++++|++||+|||++|+|.+..+|+.+++++|++|++.+
T Consensus 25 ~~~~~~~~~~~~ln~~~~~~~~~i~~~gG~v~k~~GD~~ma~fg~p~~~~~~a~~A~~~Al~~~~~~ 91 (204)
T 1yk9_A 25 ASSTAPADLVRFLDRLYSAFDELVDQHGLEKIEVSGDSYMVVSGVPRPRPDHTQALADFALDMTNVA 91 (204)
T ss_dssp SCCCCSSSTTTHHHHHHTTTTGGGTTSSCEECCCSSSCEEEESCCSSCCTTHHHHHHTHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCeEEEEECCCCCChHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999875
No 8
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=99.64 E-value=1.4e-15 Score=98.34 Aligned_cols=68 Identities=22% Similarity=0.274 Sum_probs=63.1
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCC--chHHHHHHHHHHHHHHhh
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISR--PNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~--~~ha~~~~~~Al~m~~~i 71 (72)
-+++.+|++++.+||++|+.|+.++.+|+.+++|++||+||+++|.|... .+|+.+++++|++|++.+
T Consensus 23 l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~~~~a~~a~~~al~i~~~~ 92 (198)
T 3r5g_A 23 LSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHM 92 (198)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEETTEEEEEESSSSCSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeeeCCEEEEEECCCcccccHHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999875 689999999999998754
No 9
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=99.62 E-value=2.4e-15 Score=99.60 Aligned_cols=67 Identities=16% Similarity=0.225 Sum_probs=62.1
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCC--CchHHHHHHHHHHHHHHhh
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPIS--RPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~--~~~ha~~~~~~Al~m~~~i 71 (72)
+++.+|++++.+||++|+.|++++.+|+.+++|++||+||+++|.|.. ..+|+.+++++|++|++.+
T Consensus 42 ~~~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~~~~a~~Av~~Al~~~~~l 110 (219)
T 1wc3_A 42 SNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEMSPSEQVRRAIATARQMLVAL 110 (219)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCeEEEEECCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999975 3589999999999998764
No 10
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=99.51 E-value=2e-14 Score=103.74 Aligned_cols=60 Identities=18% Similarity=0.143 Sum_probs=54.0
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
-+++.+|++++.+||++|+.||.++. |+++|+|||||+|||++|+|. .++++|++|++.+
T Consensus 229 ls~~~~p~evv~lLn~~~~~~~~i~~-~~g~~iKtiGDa~mavfg~p~-------~a~~~Al~m~~~l 288 (407)
T 1y10_A 229 LGEVVSAEELGHLAGRLAGLARDLTA-PPVWFIKTIGDAVMLVCPDPA-------PLLDTVLKLVEVV 288 (407)
T ss_dssp TSCBCCHHHHHHHHHHHHHHHHHHCC-TTCEEEEEETTEEEEEESSHH-------HHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHH-cCcEEEEEecceEEEEECCHH-------HHHHHHHHHHHHH
Confidence 36788999999999999999999887 899999999999999999875 4788999998765
No 11
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=99.43 E-value=1.5e-13 Score=89.02 Aligned_cols=60 Identities=8% Similarity=0.222 Sum_probs=54.6
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
+++++|++++.+||++|+.|+.++.+|+.+++|++||+||+++|.| .+++++|++|++.+
T Consensus 32 ~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~v~k~~GD~~ma~f~~p-------~~A~~~Al~~~~~l 91 (184)
T 1ybt_A 32 AAALGDDRWRDLLDNHDTIVCHEIQRFGGREVNTAGDGFVATFTSP-------SAAIACADDIVDAV 91 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSSEEEEESCH-------HHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeEeCCEEEEEeCCH-------HHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999999986 35788999998764
No 12
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=99.39 E-value=5.5e-13 Score=88.26 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=49.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHh
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGA 70 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~ 70 (72)
+++. |++++.+||++|+.||.++.+|+++++||+||+||+++|.|. +++++|++|++.
T Consensus 27 ~~~~-~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~ma~fg~p~-------~A~~~Al~i~~~ 84 (235)
T 1fx2_A 27 WAAH-PDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPF-------AAVQLAQELQLC 84 (235)
T ss_dssp HHHC-TTTHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCHH-------HHHHHHHHHHHH
T ss_pred HHHC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCeEEEEeCCHH-------HHHHHHHHHHHH
Confidence 3444 899999999999999999999999999999999999999864 356677777654
No 13
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=99.26 E-value=3.1e-11 Score=77.66 Aligned_cols=59 Identities=15% Similarity=0.044 Sum_probs=51.6
Q ss_pred hhcCCHHHHHHHHHHHHHH-HHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHHhh
Q psy10907 5 EEEVEEEEKRRMVSGAVVM-LTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIGAI 71 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~-FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~~i 71 (72)
+++.+|+++ ..||++|.. |+.++.+||.+++|++||+||+++|. +.+++++|++|++.+
T Consensus 22 ~~~~~~~~~-~~l~~~~~~~~~~~i~~~~G~v~k~~GD~~~a~f~~-------~~~A~~~Al~i~~~l 81 (189)
T 3mr7_A 22 MERNETDVL-NRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFDT-------AQAALRCALEIQQAM 81 (189)
T ss_dssp GCCCCHHHH-HHHHHHHHHTHHHHHHHTTCEEEEEETTEEEEEESS-------HHHHHHHHHHHHHHH
T ss_pred HhhCCHHHH-HHHHHHHHHHHHHHHHHcCCEEEEEeCCEEEEEeCC-------HHHHHHHHHHHHHHH
Confidence 567788765 889999998 99999999999999999999999994 467889999998764
No 14
>3tek_A Thermodbp-single stranded DNA binding protein; leucine zipper; 2.00A {Thermoproteus tenax}
Probab=80.76 E-value=1.9 Score=26.88 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHH-----HHHHHhhcCceEEeeeCCeeeEeeCC
Q psy10907 11 EEKRRMVSGAVVM-----LTLDLEENQCMRIKILGDCYYCVSGL 49 (72)
Q Consensus 11 ~evv~~Ln~lf~~-----FD~l~~~~~v~KiktiGD~Ym~v~Gl 49 (72)
++.-.-+|++|.. |++++-+|++.| ||.+|.+.-+
T Consensus 83 ~~Fr~ssre~Fd~~K~WFFnE~~pky~l~k----GDiFmiiTel 122 (148)
T 3tek_A 83 EKFRETSRELFDGLKKWFFEEAVPRYNLER----GDIFMISTEL 122 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHTCCT----TCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhCCCc----CcEEEEEEEE
Confidence 4555667777765 899999999999 9999998754
No 15
>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}
Probab=78.35 E-value=2.7 Score=26.94 Aligned_cols=34 Identities=15% Similarity=0.002 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCee
Q psy10907 10 EEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 10 p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Y 43 (72)
...+..-+.-++..|..+..++|+.+|.++|+.|
T Consensus 93 ~~~l~~Gv~m~~~~l~~~L~k~Gv~~i~~~Ge~F 126 (177)
T 3a6m_A 93 PESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAF 126 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEECCCTTSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCC
Confidence 4557777888999999999999999999999854
No 16
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=76.46 E-value=3.5 Score=26.83 Aligned_cols=33 Identities=3% Similarity=-0.236 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceEEeeeCCee
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Y 43 (72)
..+..-+.-++..|..+..++|+.+|..+|+.|
T Consensus 117 ~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~F 149 (197)
T 1dkg_A 117 SAMVEDIELTLKSMLDVVRKFGVEVIAETNVPL 149 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCC
Confidence 346677888999999999999999999999854
No 17
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=65.95 E-value=6.8 Score=25.93 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCee
Q psy10907 10 EEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 10 p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Y 43 (72)
...+..-+.-++..|..+..++|+.+|..+|+.|
T Consensus 135 ~~~l~eGvemi~k~l~~~L~k~Gv~~I~~~Ge~F 168 (213)
T 4ani_A 135 AKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPF 168 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCCCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCC
Confidence 3456667778999999999999999999999854
No 18
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=50.40 E-value=24 Score=20.30 Aligned_cols=25 Identities=0% Similarity=-0.040 Sum_probs=22.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHhh
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTLDLEE 30 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~l~~~ 30 (72)
++.+|+.+...|..++..|=.++.+
T Consensus 42 ~~~Tpq~L~~~l~~~h~~FiaLAa~ 66 (93)
T 3t98_B 42 SHITPQDLSMAMQKIYQTFVALAAQ 66 (93)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999875
No 19
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=47.41 E-value=16 Score=21.75 Aligned_cols=21 Identities=10% Similarity=0.140 Sum_probs=16.9
Q ss_pred hcCCHHHHHHHHHHHHHHHHHH
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTLD 27 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~l 27 (72)
.+++++|+ .-|.+.|..||..
T Consensus 1 sqLt~eqi-~elre~F~~fD~~ 21 (159)
T 3i5g_C 1 SQLTKDEI-EEVREVFDLFDFW 21 (159)
T ss_dssp CCCCHHHH-HHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHCcC
Confidence 36788886 6789999999963
No 20
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=45.52 E-value=10 Score=28.85 Aligned_cols=24 Identities=17% Similarity=-0.085 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHh---hcCceEEeeeCCee
Q psy10907 18 SGAVVMLTLDLE---ENQCMRIKILGDCY 43 (72)
Q Consensus 18 n~lf~~FD~l~~---~~~v~KiktiGD~Y 43 (72)
|=+|+.||++|+ +|+|.- .+||+.
T Consensus 350 NplYe~FD~ileI~k~YDVtl--SLGDgl 376 (612)
T 3epo_A 350 NFLYERFDEICEIMRAYDVSF--SLGDGL 376 (612)
T ss_dssp CHHHHTHHHHHHHHTTTTCEE--EECCTT
T ss_pred ChHHHHHHHHHHHHHHhCeEE--eccccc
Confidence 459999999998 455543 577753
No 21
>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}
Probab=45.07 E-value=18 Score=19.30 Aligned_cols=22 Identities=14% Similarity=0.069 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||+||..+-.++..-|
T Consensus 12 e~~i~eL~~iF~dla~lV~eQg 33 (71)
T 2nps_B 12 EADILDVNQIFKDLAMMIHDQG 33 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4567889999999999987554
No 22
>3b5n_B Protein SSO1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=44.74 E-value=19 Score=19.18 Aligned_cols=22 Identities=14% Similarity=-0.019 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||+||..+..++..-|
T Consensus 16 e~~i~eL~~iF~dla~lV~eQg 37 (69)
T 3b5n_B 16 EKSMAELTQLFNDMEELVIEQQ 37 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4567889999999999987654
No 23
>1gl2_B Syntaxin 7; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1
Probab=43.22 E-value=21 Score=18.81 Aligned_cols=22 Identities=14% Similarity=0.063 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||+||..+-.++..-|
T Consensus 15 e~~i~eL~~iF~dla~lV~eQg 36 (65)
T 1gl2_B 15 EADIMDINEIFKDLGMMIHEQG 36 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999887544
No 24
>1n7s_B Syntaxin 1A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_B 3rk3_B 3rl0_B 1kil_B
Probab=43.09 E-value=21 Score=18.91 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||++|..+-.++..-|
T Consensus 18 e~~i~eL~~iF~dla~lV~eQg 39 (68)
T 1n7s_B 18 ENSIRELHDMFMDMAMLVESQG 39 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4567889999999999987554
No 25
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=42.92 E-value=20 Score=19.38 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||++|..+-.++...|
T Consensus 16 e~~i~eL~~iF~dla~lV~eQg 37 (77)
T 1jth_B 16 ENSIRELHDMFMDMAMLVESQG 37 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4567889999999999987654
No 26
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=41.19 E-value=58 Score=19.62 Aligned_cols=49 Identities=12% Similarity=0.098 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHH
Q psy10907 14 RRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIG 69 (72)
Q Consensus 14 v~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~ 69 (72)
+++-..+...|.+.+.++|..||..+ ++-++-+..-.++ ..+||++.+.
T Consensus 4 ~sia~~iv~~v~~~A~~~g~~~V~~V---~l~IG~ls~v~~e----~l~faf~~~~ 52 (139)
T 3a43_A 4 WALADAIVRTVLDYAQREGASRVKAV---RVVLGELQDVAED----IVKFAMEQLF 52 (139)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEE---EEEEETTCCCCHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeehhH---HhhHHHHhhhhHH----HHHHHHHHHH
Confidence 36677889999999999999999888 6666655444333 4556666553
No 27
>1ylx_A Hypothetical protein APC35702; dimer, structural genomics, PSI, protein structure initiative; 1.60A {Geobacillus stearothermophilus} SCOP: d.82.5.1
Probab=39.22 E-value=31 Score=20.38 Aligned_cols=24 Identities=13% Similarity=0.072 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhhcCceEEee
Q psy10907 15 RMVSGAVVMLTLDLEENQCMRIKI 38 (72)
Q Consensus 15 ~~Ln~lf~~FD~l~~~~~v~Kikt 38 (72)
..+|++-..|+.+.++||+..|.+
T Consensus 11 ~ii~el~~~~~~~l~~Ygld~vgi 34 (103)
T 1ylx_A 11 VVIEEFIDTLEPMMEAYGLDQVGI 34 (103)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCcceee
Confidence 357899999999999998765544
No 28
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=37.45 E-value=26 Score=24.73 Aligned_cols=37 Identities=8% Similarity=0.088 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhcCc-eEEeeeCCeeeE
Q psy10907 9 EEEEKRRMVSGAVVMLTLDLEENQC-MRIKILGDCYYC 45 (72)
Q Consensus 9 ~p~evv~~Ln~lf~~FD~l~~~~~v-~KiktiGD~Ym~ 45 (72)
+|+++...+.++...-..+.+.+|+ |+|...||-.+.
T Consensus 202 tpEqs~~e~e~l~~~ae~il~~LgLpyrv~~~~D~~f~ 239 (346)
T 3mf2_A 202 TPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDPFFG 239 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCCCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEccCCCcC
Confidence 6899999999999999999999887 688888885544
No 29
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=37.20 E-value=12 Score=19.36 Aligned_cols=22 Identities=9% Similarity=0.092 Sum_probs=16.0
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHH
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~ 26 (72)
.+.+++|++ +.-|..+|..||.
T Consensus 4 ~~~~l~~~~-~~~l~~~F~~~D~ 25 (86)
T 1j7q_A 4 KARALGPEE-KDECMKIFDIFDR 25 (86)
T ss_dssp CCCCCSSTH-HHHHHHHHHHHST
T ss_pred ccccCCHHH-HHHHHHHHHHhCC
Confidence 345677777 4678889999985
No 30
>1sfc_B Protein (syntaxin 1A), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1l4a_B
Probab=36.73 E-value=29 Score=19.11 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||+||..+-.++..-|
T Consensus 27 e~~i~eL~~iF~dla~lV~eQg 48 (83)
T 1sfc_B 27 ENSIRELHDMFMDMAMLVESQG 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4567889999999999987654
No 31
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=35.89 E-value=22 Score=18.26 Aligned_cols=20 Identities=5% Similarity=-0.125 Sum_probs=13.4
Q ss_pred hcCCHHHHHHHHHHHHHHHHH
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~ 26 (72)
.+++|++ ..-|..+|..||.
T Consensus 3 ~~~~~~~-~~~l~~~F~~~D~ 22 (86)
T 2opo_A 3 AEDTPQD-IADRERIFKRFDT 22 (86)
T ss_dssp ---CHHH-HHHHHHHHHHHCT
T ss_pred ccCCHhh-HHHHHHHHHHHCC
Confidence 4567777 5778889999984
No 32
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=35.33 E-value=35 Score=18.79 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=16.2
Q ss_pred hcCCHHHHHHHHHHHHHHHHHH
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTLD 27 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~l 27 (72)
.+++|+++ .-|..+|..||.-
T Consensus 3 ~~l~~~~~-~~l~~~F~~~D~d 23 (153)
T 3ox6_A 3 RSLRPEEI-EELREAFREFDKD 23 (153)
T ss_dssp SCCCHHHH-HHHHHHHHHHHHH
T ss_pred ccCCHHHH-HHHHHHHHHhCCC
Confidence 46788886 6788899998863
No 33
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=34.14 E-value=2.9 Score=23.80 Aligned_cols=18 Identities=22% Similarity=0.577 Sum_probs=15.2
Q ss_pred HHHHhhcCceEEeeeCCe
Q psy10907 25 TLDLEENQCMRIKILGDC 42 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~ 42 (72)
|....-|++||.-|.|||
T Consensus 25 ~~~L~LYalyKQAt~Gd~ 42 (89)
T 1hbk_A 25 ELKLDLYKYYKQSTIGNC 42 (89)
T ss_dssp HHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHhhcCCC
Confidence 566677889999999997
No 34
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=32.35 E-value=3.1 Score=23.54 Aligned_cols=19 Identities=21% Similarity=0.055 Sum_probs=15.4
Q ss_pred HHHHhhcCceEEeeeCCee
Q psy10907 25 TLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Y 43 (72)
|....-|++||.-|.|||-
T Consensus 22 ~~~L~lYalyKQAt~Gd~~ 40 (86)
T 1st7_A 22 DELLELYALYKQATVGDND 40 (86)
T ss_dssp HHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHhhCCCC
Confidence 5566678899999999974
No 35
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=31.80 E-value=22 Score=19.63 Aligned_cols=16 Identities=0% Similarity=0.181 Sum_probs=11.9
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q psy10907 7 EVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~ 26 (72)
+++++| |..+|..||.
T Consensus 1 sls~~e----l~~~F~~~D~ 16 (145)
T 2bl0_B 1 TASADQ----IQECFQIFDK 16 (145)
T ss_dssp CCCHHH----HHHHHHHHCT
T ss_pred CCCHHH----HHHHHHHhCC
Confidence 456777 7888888885
No 36
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=31.66 E-value=96 Score=20.89 Aligned_cols=42 Identities=24% Similarity=0.249 Sum_probs=27.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhhc--CceEEeeeCCeeeEeeCCCCC
Q psy10907 7 EVEEEEKRRMVSGAVVMLTLDLEEN--QCMRIKILGDCYYCVSGLPIS 52 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~l~~~~--~v~KiktiGD~Ym~v~Glp~~ 52 (72)
+.+++||-.+++-+-..|+..+... .--+|+.|||- +.+|..
T Consensus 83 kRp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~----~~Lp~~ 126 (256)
T 4h8e_A 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT----DKLPKS 126 (256)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCG----GGSCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEecCc----ccCCHH
Confidence 5678887666666666666665431 33689999994 456643
No 37
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=31.57 E-value=1.1e+02 Score=20.15 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=26.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhhc--CceEEeeeCCeeeEeeCCCCC
Q psy10907 7 EVEEEEKRRMVSGAVVMLTLDLEEN--QCMRIKILGDCYYCVSGLPIS 52 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~l~~~~--~v~KiktiGD~Ym~v~Glp~~ 52 (72)
+.+++||-.+++-+-..+++..... .--+|+.|||- +.||..
T Consensus 65 ~Rp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~----~~Lp~~ 108 (225)
T 3ugs_B 65 KRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDL----SRLEDK 108 (225)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEESCG----GGSCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEeCh----HhCCHH
Confidence 4678887666655555555554432 23599999994 556654
No 38
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=30.88 E-value=30 Score=19.74 Aligned_cols=19 Identities=26% Similarity=0.258 Sum_probs=14.4
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q psy10907 7 EVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~ 26 (72)
+++++|+ .-|.++|..||.
T Consensus 3 ~lt~eqi-~el~~~F~~~D~ 21 (148)
T 2lmt_A 3 ELTEEQI-AEFKDAFVQFDK 21 (148)
T ss_dssp SCCSHHH-HHHHHHHHHHHC
T ss_pred CCCHHHH-HHHHHHHHHHcC
Confidence 4667775 678889999985
No 39
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=30.71 E-value=24 Score=16.51 Aligned_cols=18 Identities=11% Similarity=-0.060 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHhhcCceE
Q psy10907 18 SGAVVMLTLDLEENQCMR 35 (72)
Q Consensus 18 n~lf~~FD~l~~~~~v~K 35 (72)
.+++..+|.++.+.|+-+
T Consensus 11 ~~l~~~Ld~~a~~~g~sr 28 (45)
T 2cpg_A 11 ESVLENLEKMAREMGLSK 28 (45)
T ss_dssp HHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHCcCH
Confidence 357888899988887644
No 40
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=30.70 E-value=3.6 Score=23.38 Aligned_cols=19 Identities=16% Similarity=-0.032 Sum_probs=15.6
Q ss_pred HHHHhhcCceEEeeeCCee
Q psy10907 25 TLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Y 43 (72)
|....-|++||.-|.|||-
T Consensus 23 ~~~L~lYalyKQAt~Gd~~ 41 (87)
T 2cb8_A 23 EEMLFIYGHYKQATVGDIN 41 (87)
T ss_dssp HHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHhhhhCCCC
Confidence 5566678899999999975
No 41
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=30.29 E-value=27 Score=17.79 Aligned_cols=22 Identities=14% Similarity=0.214 Sum_probs=15.9
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHH
Q psy10907 4 EEEEVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 4 ~~~~~~p~evv~~Ln~lf~~FD~ 26 (72)
-+.++++++. .-|..+|..||.
T Consensus 4 ~~~~l~~~~~-~~l~~~F~~~D~ 25 (85)
T 2ktg_A 4 QKKVLTAEEQ-QEYKEAFQLFDK 25 (85)
T ss_dssp CCCSSSHHHH-HHHHHHHHHTCT
T ss_pred hhhhCCHHHH-HHHHHHHHHHCC
Confidence 3456777664 678889999984
No 42
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=30.00 E-value=88 Score=20.45 Aligned_cols=35 Identities=11% Similarity=0.179 Sum_probs=22.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHh-hcCceEEeeeCCe
Q psy10907 7 EVEEEEKRRMVSGAVVMLTLDLE-ENQCMRIKILGDC 42 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~l~~-~~~v~KiktiGD~ 42 (72)
+.+++||-.+++-+-..|+.... +++ -+++.|||.
T Consensus 62 kRp~~Ev~~Lm~l~~~~l~~~~~~~~~-vrv~~iG~~ 97 (227)
T 2vg0_A 62 QRDPDELAALIEIITDVVEEICAPANH-WSVRTVGDL 97 (227)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHTCTTTC-CEEEEESCG
T ss_pred CCCHHHHHHHHHHHHHHHHHHhccccC-eEEEecCCh
Confidence 56778885555555555666553 455 499999984
No 43
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=28.82 E-value=88 Score=18.02 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHH
Q psy10907 14 RRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLEMI 68 (72)
Q Consensus 14 v~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~ 68 (72)
+++-..+...|.+.+.++|..||..+ ++-++-+....++ ..+|+++.+
T Consensus 6 ~si~~~i~~~~~~~A~~~g~~~V~~V---~l~IG~ls~v~~e----~l~f~f~~~ 53 (119)
T 2kdx_A 6 YSVVSSLIALCEEHAKKNQAHKIERV---VVGIGERSAMDKS----LFVSAFETF 53 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCEE---EEEEETTSCCCHH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEE---EEEeehhccccHH----HHHHHHHHH
Confidence 46778889999999999999998877 6666655433332 445555544
No 44
>1bby_A RAP30; average structure transcription regulation, DNA- binding domain, transcription; NMR {Homo sapiens} SCOP: a.4.5.15 PDB: 2bby_A
Probab=27.81 E-value=39 Score=18.45 Aligned_cols=12 Identities=0% Similarity=-0.053 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHH
Q psy10907 15 RMVSGAVVMLTL 26 (72)
Q Consensus 15 ~~Ln~lf~~FD~ 26 (72)
.+|+-||+.|++
T Consensus 8 ~l~d~lF~~Fek 19 (69)
T 1bby_A 8 HVLDMLFSAFEK 19 (69)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 467778888864
No 45
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=27.75 E-value=64 Score=18.49 Aligned_cols=22 Identities=14% Similarity=0.392 Sum_probs=13.1
Q ss_pred HHHHHHHHHhhcCceEEeeeCC
Q psy10907 20 AVVMLTLDLEENQCMRIKILGD 41 (72)
Q Consensus 20 lf~~FD~l~~~~~v~KiktiGD 41 (72)
+...+|...+.|.+-||+..++
T Consensus 33 vi~ei~~aL~~~ELIKVkvl~~ 54 (98)
T 1jo0_A 33 VLAEIENALNHHELIKVKVAGA 54 (98)
T ss_dssp HHHHHHHHHHHHSEEEEEETTC
T ss_pred HHHHHHHHHHHCCeEEEEEeCC
Confidence 4455566666666666666543
No 46
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=27.16 E-value=43 Score=18.81 Aligned_cols=15 Identities=7% Similarity=-0.031 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHH
Q psy10907 14 RRMVSGAVVMLTLDL 28 (72)
Q Consensus 14 v~~Ln~lf~~FD~l~ 28 (72)
=+-+++||.++|.+-
T Consensus 61 Sssi~dIy~RLd~le 75 (77)
T 2bez_C 61 SSVLNDILSRLDKVE 75 (77)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 355778888888763
No 47
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=26.97 E-value=50 Score=19.08 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q psy10907 11 EEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 11 ~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
+.-+.-||++|..+-.++...|
T Consensus 27 e~~I~eL~~iF~dla~lV~eQg 48 (109)
T 3hd7_B 27 ENSIRELHDMFMDMAMLVESQG 48 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4567889999999998887654
No 48
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.77 E-value=4.8 Score=23.86 Aligned_cols=20 Identities=15% Similarity=0.074 Sum_probs=16.2
Q ss_pred HHHHHhhcCceEEeeeCCee
Q psy10907 24 LTLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 24 FD~l~~~~~v~KiktiGD~Y 43 (72)
-|..+.-|++||.-|.|||-
T Consensus 28 ~~~~L~LYaLyKQAt~Gd~~ 47 (109)
T 2cop_A 28 REQLLYLYARYKQVKVGNCN 47 (109)
T ss_dssp HHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHhhcCCCC
Confidence 36667778999999999964
No 49
>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A
Probab=26.57 E-value=51 Score=22.49 Aligned_cols=27 Identities=11% Similarity=0.128 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhhc-CceEEeeeCCee
Q psy10907 17 VSGAVVMLTLDLEEN-QCMRIKILGDCY 43 (72)
Q Consensus 17 Ln~lf~~FD~l~~~~-~v~KiktiGD~Y 43 (72)
++++...++.++.++ ++-++.+||..|
T Consensus 12 y~ei~~~l~~L~~~~p~~v~~~~iG~S~ 39 (326)
T 3v38_A 12 YNEMVNKINTVASNYPNIVKKFSIGKSY 39 (326)
T ss_dssp HHHHHHHHHHHHHHCTTTEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeeEcc
Confidence 456777778888777 577777887544
No 50
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=26.33 E-value=87 Score=18.21 Aligned_cols=21 Identities=10% Similarity=0.126 Sum_probs=9.7
Q ss_pred HHHHhhcCceEEeeeCCeeeE
Q psy10907 25 TLDLEENQCMRIKILGDCYYC 45 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Ym~ 45 (72)
+.++++.+.+-|..||.....
T Consensus 63 ~~la~~t~a~vVq~IG~~~VL 83 (104)
T 1rq8_A 63 ETLSEATRSELVQVIGSMIVI 83 (104)
T ss_dssp HHHHHHHTEEEEEEETTEEEE
T ss_pred HHHHHHhCCEEEEEECCEEEE
Confidence 344444445555555544333
No 51
>1n6z_A Hypothetical 12.3 kDa protein in ZDS2-URA5 intergenic region; structural proteomics, structural genomics, OCSP, NESG; NMR {Saccharomyces cerevisiae} SCOP: d.263.1.1
Probab=25.61 E-value=1.1e+02 Score=18.01 Aligned_cols=35 Identities=6% Similarity=0.025 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHhhc--CceEEeeeCCeeeEe
Q psy10907 12 EKRRMVSGAVVMLTLDLEEN--QCMRIKILGDCYYCV 46 (72)
Q Consensus 12 evv~~Ln~lf~~FD~l~~~~--~v~KiktiGD~Ym~v 46 (72)
+-+..||.-|..||+-+.-. |--|-+.=.|+..++
T Consensus 48 ~~~d~lN~~FDkFDE~I~iPNEghIKYEv~SDGLVVl 84 (105)
T 1n6z_A 48 DELDELNTWFDKFDAEICIPNEGHIKYEISSDGLIVL 84 (105)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCSCEEEEEETTTEEEE
T ss_pred hhHHHHHHHHHhhccceecCCCCceeEEecCCcEEEE
Confidence 44688999999999977643 444544444554443
No 52
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=25.26 E-value=42 Score=19.63 Aligned_cols=19 Identities=11% Similarity=0.251 Sum_probs=15.1
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q psy10907 7 EVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~ 26 (72)
+++++|+ .-|.+.|..||.
T Consensus 9 ~Lt~~qi-~elk~~F~~~D~ 27 (153)
T 3i5g_B 9 KLSQRQM-QELKEAFTMIDQ 27 (153)
T ss_dssp TCCHHHH-HHHHHHHHHHCC
T ss_pred CCCHHHH-HHHHHHHHHHCC
Confidence 5778876 678889999985
No 53
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=24.80 E-value=34 Score=24.95 Aligned_cols=22 Identities=18% Similarity=0.290 Sum_probs=16.8
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHH
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLD 27 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l 27 (72)
+|+++++|+ .-|.++|..||.-
T Consensus 293 ~E~Lt~EEI-~ELREaF~~fDkD 314 (440)
T 3u0k_A 293 RDQLTEEQI-AEFKEAFSLFDKD 314 (440)
T ss_dssp CBCCCHHHH-HHHHHHHHHHCTT
T ss_pred HhhhhHHHH-HHHHHHHHHHcCC
Confidence 466777776 7788999999853
No 54
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=24.33 E-value=5.5 Score=22.74 Aligned_cols=19 Identities=21% Similarity=0.032 Sum_probs=14.8
Q ss_pred HHHHhhcCceEEeeeCCee
Q psy10907 25 TLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Y 43 (72)
|....-|+.||.-|.||+-
T Consensus 25 ~~~L~lYalyKQAt~Gd~~ 43 (89)
T 3epy_A 25 GELKELYGLYKQAIVGDIN 43 (89)
T ss_dssp HHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHhhCCCC
Confidence 4455668899999999975
No 55
>3kdq_A Uncharacterized conserved protein; functionally unknown protein,corynebacterium diphtheriae, structural genomics, PSI-2; 3.00A {Corynebacterium diphtheriae}
Probab=24.30 E-value=89 Score=19.36 Aligned_cols=25 Identities=4% Similarity=-0.129 Sum_probs=21.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhcC
Q psy10907 8 VEEEEKRRMVSGAVVMLTLDLEENQ 32 (72)
Q Consensus 8 ~~p~evv~~Ln~lf~~FD~l~~~~~ 32 (72)
-+|.+++.-|+++...+|.++.+-+
T Consensus 41 edp~~Ll~El~~~~~~L~~Li~~IN 65 (154)
T 3kdq_A 41 ENPHEILTELEELTTRINDLVRRIN 65 (154)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999999998644
No 56
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=24.23 E-value=56 Score=17.44 Aligned_cols=14 Identities=21% Similarity=0.378 Sum_probs=12.0
Q ss_pred cCCHHHHHHHHHHH
Q psy10907 7 EVEEEEKRRMVSGA 20 (72)
Q Consensus 7 ~~~p~evv~~Ln~l 20 (72)
.+++++|+..|+.|
T Consensus 36 gV~kdeV~~~LrrL 49 (59)
T 2xvc_A 36 GVEKQEVVKLLEAL 49 (59)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 57899999999886
No 57
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=24.15 E-value=69 Score=18.03 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=18.0
Q ss_pred chhhhcCCHHHHHHHHHHHHHH
Q psy10907 2 KEEEEEVEEEEKRRMVSGAVVM 23 (72)
Q Consensus 2 ~~~~~~~~p~evv~~Ln~lf~~ 23 (72)
|..-+..+-.|.+.+++++|..
T Consensus 4 k~~i~DyTe~Efi~lv~~I~~~ 25 (85)
T 1gxg_A 4 KNSISDYTETEFKKIIEDIINC 25 (85)
T ss_dssp CSSTTTSCHHHHHHHHHHHHHT
T ss_pred chhhhhcCHHHHHHHHHHHHhC
Confidence 4566788899999999999865
No 58
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=23.79 E-value=71 Score=17.24 Aligned_cols=17 Identities=0% Similarity=0.077 Sum_probs=14.2
Q ss_pred hcCCHHHHHHHHHHHHH
Q psy10907 6 EEVEEEEKRRMVSGAVV 22 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~ 22 (72)
-.++|++++..||+++.
T Consensus 48 hgiD~d~ll~eLn~~i~ 64 (76)
T 2k53_A 48 HGIDADKLVKELNEYFE 64 (76)
T ss_dssp HTCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 35789999999999874
No 59
>3oaa_A ATP synthase subunit alpha; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1} PDB: 2a7u_A
Probab=23.24 E-value=34 Score=25.40 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCC
Q psy10907 8 VEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPI 51 (72)
Q Consensus 8 ~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~ 51 (72)
..|.|+-+.|.+-...|+.-......=+|..|+|...-+.|++.
T Consensus 3 ~~~~~~~~~~~~~i~~~~~~~~~~~~G~V~~v~g~i~~v~Gl~~ 46 (513)
T 3oaa_A 3 LNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD 46 (513)
T ss_dssp ---------------------CCTTEEEEEEEETTEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceeEEEEEEEECcEEEEECCcc
Confidence 56888989999999999987777777899999999999999974
No 60
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.20 E-value=7.3 Score=23.41 Aligned_cols=19 Identities=16% Similarity=0.253 Sum_probs=16.3
Q ss_pred HHHHhhcCceEEeeeCCee
Q psy10907 25 TLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Y 43 (72)
|..+.-|++||.-|.|||-
T Consensus 37 ~~~L~LYaLyKQAt~Gd~~ 55 (116)
T 2cqu_A 37 EVKLKLYALYKQATEGPCN 55 (116)
T ss_dssp HHHHHHHHHHTTTTTCSCC
T ss_pred HHHHHHHHHHHHHhcCCCC
Confidence 6677788999999999984
No 61
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*
Probab=22.75 E-value=68 Score=21.25 Aligned_cols=25 Identities=8% Similarity=-0.047 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhhc-CceEEeeeCCe
Q psy10907 18 SGAVVMLTLDLEEN-QCMRIKILGDC 42 (72)
Q Consensus 18 n~lf~~FD~l~~~~-~v~KiktiGD~ 42 (72)
.++...+++++.++ +.-++.+||..
T Consensus 14 ~ei~~~l~~l~~~~p~~~~~~~iG~S 39 (308)
T 2bo9_A 14 EAIYHEMDNIAADFPDLARRVKIGHS 39 (308)
T ss_dssp HHHHHHHHHHHHHSTTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCcEEEEecccc
Confidence 45666777777776 67777777764
No 62
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=22.68 E-value=6.1 Score=23.33 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=16.2
Q ss_pred HHHHHhhcCceEEeeeCCee
Q psy10907 24 LTLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 24 FD~l~~~~~v~KiktiGD~Y 43 (72)
-|....-|++||.-|.||+-
T Consensus 32 ~e~~L~LYaLyKQAt~Gd~~ 51 (106)
T 2wh5_A 32 YEEMLRFYSYYKQATMGPCL 51 (106)
T ss_dssp HHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhhhccCCCC
Confidence 46667778899999999984
No 63
>2kkm_A Translation machinery-associated protein 16; nucleus, structural genomics, PSI-2, protein structure initiative; NMR {Saccharomyces cerevisiae}
Probab=22.68 E-value=1.1e+02 Score=18.66 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=23.6
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHhhcCc
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTLDLEENQC 33 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~l~~~~~v 33 (72)
+..+++++..+...+..+||.=+++...
T Consensus 43 ~~~t~~e~~~lI~~yl~R~d~ELeql~~ 70 (144)
T 2kkm_A 43 PIFDHAHTREFIQSFIERDDTELDELKK 70 (144)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3589999999999999999998775543
No 64
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=22.62 E-value=54 Score=18.94 Aligned_cols=21 Identities=14% Similarity=0.124 Sum_probs=16.1
Q ss_pred hcCCHHHHHHHHHHHHHHHHH
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~ 26 (72)
..++++++-.+++.+|..+|.
T Consensus 107 ~~~s~~e~~~~~~~~f~~~D~ 127 (143)
T 3a4u_B 107 PLMSEDELINIIDGVLRDDDK 127 (143)
T ss_dssp --CCHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHHHHHHHHcCC
Confidence 467888888888989888874
No 65
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=22.61 E-value=6.4 Score=23.27 Aligned_cols=19 Identities=16% Similarity=0.146 Sum_probs=15.6
Q ss_pred HHHHhhcCceEEeeeCCee
Q psy10907 25 TLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Y 43 (72)
|....-|++||.-|.|||-
T Consensus 29 ~~~L~LYalyKQAt~Gd~~ 47 (106)
T 3fp5_A 29 DEQLYFYKYFKQATVGDVN 47 (106)
T ss_dssp HHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHhcCCCC
Confidence 5666778899999999964
No 66
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=22.32 E-value=1.9e+02 Score=19.54 Aligned_cols=43 Identities=19% Similarity=0.152 Sum_probs=37.6
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeC
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSG 48 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~G 48 (72)
+..+|-++.....+++...-+.+.+++..-...=||-||+.+.
T Consensus 148 ~~~s~yd~~~~~l~l~~~Ll~y~~~igG~lf~iGgdny~iftt 190 (268)
T 2qv6_A 148 DIVSAYDTYLNVNKVKLALMEELLKYNALLFFIGGDNFMAPSN 190 (268)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTTTCCCEEEETTEEEEECT
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhCCEEEEECCCEEEEEeC
Confidence 4568999999999999999999999988877677799999985
No 67
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*
Probab=21.94 E-value=69 Score=22.58 Aligned_cols=27 Identities=11% Similarity=0.177 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhhc-CceEEeeeCCee
Q psy10907 17 VSGAVVMLTLDLEEN-QCMRIKILGDCY 43 (72)
Q Consensus 17 Ln~lf~~FD~l~~~~-~v~KiktiGD~Y 43 (72)
++++...++.++.++ ++-++.+||..|
T Consensus 104 ~~ei~~~l~~L~~~~p~~v~~~~iG~S~ 131 (401)
T 3dgv_A 104 LNEIYSWIEVMTERYPDMVEKIHIGSSY 131 (401)
T ss_dssp HHHHHHHHHHHHHHCTTTEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEcccCC
Confidence 456778888888877 577888888554
No 68
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=21.88 E-value=3.8 Score=23.89 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=15.3
Q ss_pred HHHHhhcCceEEeeeCCee
Q psy10907 25 TLDLEENQCMRIKILGDCY 43 (72)
Q Consensus 25 D~l~~~~~v~KiktiGD~Y 43 (72)
|....-|++||.-|.|||-
T Consensus 32 ~~~L~LYaLyKQAt~Gd~~ 50 (96)
T 2lbb_A 32 DDKLCFYKYYKQATVGDCN 50 (96)
T ss_dssp TTTTHHHHHHHHTTTSSCC
T ss_pred HHHHHHHHHHHHHhcCCCC
Confidence 4556678899999999984
No 69
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A
Probab=21.76 E-value=73 Score=21.39 Aligned_cols=27 Identities=11% Similarity=0.128 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhhc-CceEEeeeCCee
Q psy10907 17 VSGAVVMLTLDLEEN-QCMRIKILGDCY 43 (72)
Q Consensus 17 Ln~lf~~FD~l~~~~-~v~KiktiGD~Y 43 (72)
..++...++.++.++ ++-++.+||..|
T Consensus 12 y~ei~~~l~~l~~~~p~~~~~~~iG~S~ 39 (323)
T 3prt_A 12 YNEMVNKINTVASNYPNIVKKFSIGKSY 39 (323)
T ss_dssp HHHHHHHHHHHHHHCTTTEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEeceecc
Confidence 345667777777776 577777887643
No 70
>2qe7_A ATP synthase subunit alpha; blockage of ATP hydrolysis, F1-ATPase, single analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} PDB: 1sky_B
Probab=21.32 E-value=61 Score=23.92 Aligned_cols=45 Identities=22% Similarity=0.233 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCC
Q psy10907 8 VEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPIS 52 (72)
Q Consensus 8 ~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~ 52 (72)
..|.|+-+.|.+-...|+........=+|..+++...-+.|+|..
T Consensus 3 ~~~~~~~~~~~~~i~~~~~~~~~~~~G~V~~v~g~iv~v~gl~~~ 47 (502)
T 2qe7_A 3 IRPEEISALIKKQIENYEADLEVVEVGTVIQVGDGIARVHGLEKV 47 (502)
T ss_dssp ------------------------CEEEEEEEETTEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHHhcCCCcceeEEEEEEEecCcEEEEEECCCC
Confidence 457888888999889999887766778999999999999999753
No 71
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*
Probab=21.25 E-value=61 Score=22.37 Aligned_cols=61 Identities=15% Similarity=0.041 Sum_probs=40.3
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhcCceE------EeeeCCeeeEeeCCCCCCchHHHHHHHHHHHHHH
Q psy10907 5 EEEVEEEEKRRMVSGAVVMLTLDLEENQCMR------IKILGDCYYCVSGLPISRPNHAYNCVNMGLEMIG 69 (72)
Q Consensus 5 ~~~~~p~evv~~Ln~lf~~FD~l~~~~~v~K------iktiGD~Ym~v~Glp~~~~~ha~~~~~~Al~m~~ 69 (72)
.-++++.++++.+-.+|..++ +++++++.. +.++-..|- ..|-.+..||..++.+...++.
T Consensus 26 ~~~~~~~~~~~~~~~mF~~~~-l~~~f~i~~~~L~~fl~~v~~~Y~---~npYHN~~Ha~dV~q~~~~~l~ 92 (329)
T 3dyn_A 26 VWLWEPNEMLSCLEHMYHDLG-LVRDFSINPVTLRRWLFCVHDNYR---NNPFHNFRHCFCVAQMMYSMVW 92 (329)
T ss_dssp GGGCCHHHHHHHHHHHHHHTT-HHHHHTCCHHHHHHHHHHHHHHSC---CCSSSSHHHHHHHHHHHHHHHH
T ss_pred cccCCcchHHHHHHHHHHHCC-chHhcCCCHHHHHHHHHHHHHhcC---CCCCcCcHHHhHHHHHHHHHHH
Confidence 346889999999888888886 344444321 122344562 4577788999998887665553
No 72
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=21.13 E-value=91 Score=17.32 Aligned_cols=19 Identities=5% Similarity=0.228 Sum_probs=13.8
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q psy10907 7 EVEEEEKRRMVSGAVVMLTL 26 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~ 26 (72)
+++++++ .-|.++|..||.
T Consensus 2 ~ls~~~~-~~l~~~F~~~D~ 20 (156)
T 1wdc_C 2 KLSQDEI-DDLKDVFELFDF 20 (156)
T ss_dssp -CCHHHH-HHHHHHHHHHHH
T ss_pred CCCHHHH-HHHHHHHHHHcc
Confidence 3566664 668889999997
No 73
>3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A
Probab=21.04 E-value=49 Score=19.31 Aligned_cols=21 Identities=5% Similarity=-0.209 Sum_probs=16.5
Q ss_pred HHHHHHHHHHH----HHHHHHHHhh
Q psy10907 10 EEEKRRMVSGA----VVMLTLDLEE 30 (72)
Q Consensus 10 p~evv~~Ln~l----f~~FD~l~~~ 30 (72)
=.+++..+++. |..||.++.+
T Consensus 70 Lgel~~~~g~~~~~PF~~~d~~~~q 94 (100)
T 3k3v_A 70 LGELMTKLEKYDTDPFTTFDKLHVQ 94 (100)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHC-
T ss_pred HHHHHHHhCCCCCCCccchHHHhcc
Confidence 46888888877 9999998764
No 74
>2ck3_A ATP synthase subunit alpha\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=20.59 E-value=45 Score=24.69 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=20.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhhcCceEEeeeCCeeeEeeCCCCC
Q psy10907 7 EVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPIS 52 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD~l~~~~~v~KiktiGD~Ym~v~Glp~~ 52 (72)
+..|.|+-+.|.+-...|+.-......=+|..+++...-+.|+|..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~V~~v~g~iv~v~gl~~~ 47 (510)
T 2ck3_A 2 KTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNV 47 (510)
T ss_dssp ----------------------CCSSEEEEEEEETTEEEEEECTTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcceeEEeEEEEEECcEEEEeeCCCC
Confidence 4567888888888889998887766778999999999999999753
No 75
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=20.58 E-value=87 Score=17.53 Aligned_cols=18 Identities=11% Similarity=0.219 Sum_probs=13.8
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q psy10907 7 EVEEEEKRRMVSGAVVMLT 25 (72)
Q Consensus 7 ~~~p~evv~~Ln~lf~~FD 25 (72)
+++++++ .-|.++|..||
T Consensus 2 ~ls~~~~-~~l~~~F~~~D 19 (159)
T 2ovk_C 2 QLTKDEI-EEVREVFDLFD 19 (159)
T ss_dssp CCCHHHH-HHHHHHHHHHH
T ss_pred CCCHHHH-HHHHHHHHHhC
Confidence 4566665 67888999998
No 76
>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1
Probab=20.57 E-value=77 Score=22.12 Aligned_cols=26 Identities=8% Similarity=-0.022 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhc-CceEEeeeCCe
Q psy10907 17 VSGAVVMLTLDLEEN-QCMRIKILGDC 42 (72)
Q Consensus 17 Ln~lf~~FD~l~~~~-~v~KiktiGD~ 42 (72)
+.++...++.++.++ +.-++.+||..
T Consensus 109 ~~ei~~~l~~l~~~~p~~v~~~~iG~S 135 (404)
T 2boa_A 109 LEAIYHEMDNIAADFPDLARRVKIGHS 135 (404)
T ss_dssp HHHHHHHHHHHHHHSTTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCceEEEEeccC
Confidence 356777788888877 67788888865
No 77
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1
Probab=20.54 E-value=81 Score=20.94 Aligned_cols=25 Identities=8% Similarity=-0.117 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhhc-CceEEeeeCCe
Q psy10907 18 SGAVVMLTLDLEEN-QCMRIKILGDC 42 (72)
Q Consensus 18 n~lf~~FD~l~~~~-~v~KiktiGD~ 42 (72)
.++...++.++.++ +.-++.+||..
T Consensus 10 ~ei~~~l~~l~~~~p~~~~~~~iG~S 35 (312)
T 2c1c_A 10 EVIDEYLDYIGEKYPDVATVVNAAES 35 (312)
T ss_dssp HHHHHHHHHHHHHCTTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCceEEEecccC
Confidence 45666677777776 57788888864
No 78
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.52 E-value=97 Score=16.39 Aligned_cols=28 Identities=7% Similarity=0.109 Sum_probs=19.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHhhcCceEEeee
Q psy10907 6 EEVEEEEKRRMVSGAVVMLTLDLEENQCMRIKIL 39 (72)
Q Consensus 6 ~~~~p~evv~~Ln~lf~~FD~l~~~~~v~Kikti 39 (72)
..++.+++...|.++|+.|-. +..++.+
T Consensus 19 ~~~~~~~l~~~l~~~F~~~G~------v~~v~i~ 46 (96)
T 2dgx_A 19 YRLSRKELQQLLQEAFARHGK------VKSVELS 46 (96)
T ss_dssp TTSCHHHHHHHHHHHHHHHSC------EEEEEEC
T ss_pred CCCCHHHHHHHHHHhccccCc------EEEEEEE
Confidence 356778888888899988743 4555554
No 79
>3ezj_A General secretion pathway protein GSPD; general secretory pathway, secretin, single chain antibody, transport, immune system, complex; 2.80A {Escherichia coli}
Probab=20.24 E-value=1.6e+02 Score=18.73 Aligned_cols=29 Identities=14% Similarity=0.043 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhhcCceEEeeeCCeeeEee
Q psy10907 19 GAVVMLTLDLEENQCMRIKILGDCYYCVS 47 (72)
Q Consensus 19 ~lf~~FD~l~~~~~v~KiktiGD~Ym~v~ 47 (72)
+.+..|+.+...+|...++.-|+.|..+.
T Consensus 55 ~~~~~l~~vL~~~gl~~~~~~g~v~~V~p 83 (241)
T 3ezj_A 55 QYYQLFLNLLEAQGYAVVPMENDVLKVVK 83 (241)
T ss_dssp HHHHHHHHHHHHTTEEEEEETTTEEEEEE
T ss_pred HHHHHHHHHHHHCCcEEEEcCCCEEEEEE
Confidence 36778888888888877766788887765
Done!