RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10907
         (72 letters)



>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
          {Trypanosome (Trypanosoma brucei), different isoform
          [TaxId: 5691]}
          Length = 235

 Score = 34.5 bits (78), Expect = 4e-04
 Identities = 10/61 (16%), Positives = 19/61 (31%)

Query: 7  EVEEEEKRRMVSGAVVMLTLDLEENQCMRIKILGDCYYCVSGLPISRPNHAYNCVNMGLE 66
              +     V+    M+   +   +C  +K +GD +   S  P +    A       L 
Sbjct: 28 AAHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPFAAVQLAQELQLCFLH 87

Query: 67 M 67
           
Sbjct: 88 H 88


>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score = 23.3 bits (49), Expect = 3.2
 Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 11/64 (17%)

Query: 20  AVVMLTLDLEENQCMRIKILGDCYYCVSGLPIS-----------RPNHAYNCVNMGLEMI 68
               L    + +   +IK +G  Y   +GL              +  H    V     ++
Sbjct: 43  DFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALV 102

Query: 69  GAIR 72
           G + 
Sbjct: 103 GKLD 106


>d2od4a1 d.58.4.20 (A:1-100) Hypothetical protein GOS_3280838
          {environmental samples}
          Length = 100

 Score = 21.7 bits (46), Expect = 9.9
 Identities = 6/26 (23%), Positives = 10/26 (38%)

Query: 13 KRRMVSGAVVMLTLDLEENQCMRIKI 38
           + +  GA+    +   EN  M I  
Sbjct: 36 PKVISLGAISAEFVQSNENSGMYIIH 61


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0641    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 286,434
Number of extensions: 11333
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 7
Length of query: 72
Length of database: 2,407,596
Length adjustment: 40
Effective length of query: 32
Effective length of database: 1,858,396
Effective search space: 59468672
Effective search space used: 59468672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.1 bits)