RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10910
         (93 letters)



>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score = 32.2 bits (72), Expect = 0.004
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 51  HMESGGVPGNVLCGVLGLRKWQFDVWSDDVTLANHMESGGVPG 93
            +  G   G V+ GV+G +K Q+D+W + V +A+ M+S GV  
Sbjct: 117 KLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLD 159



 Score = 30.7 bits (68), Expect = 0.014
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 29  CGVLGLRKWQFDVWSNDVTFANHMESGGVPGNVLCG 64
            GV+G +K Q+D+W N V  A+ M+S GV   +   
Sbjct: 129 AGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVT 164


>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
           familiaris) [TaxId: 9615]}
          Length = 190

 Score = 31.8 bits (71), Expect = 0.005
 Identities = 31/57 (54%), Positives = 35/57 (61%)

Query: 37  WQFDVWSNDVTFANHMESGGVPGNVLCGVLGLRKWQFDVWSDDVTLANHMESGGVPG 93
               +         +M  G   G V CGVLGLRKWQFDVWS+DVTLANHME+GG  G
Sbjct: 93  EAISLVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAG 149


>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
           [TaxId: 118562]}
          Length = 197

 Score = 27.2 bits (59), Expect = 0.23
 Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 1/40 (2%)

Query: 55  GGVPGNVLCGVLGL-RKWQFDVWSDDVTLANHMESGGVPG 93
           G   G  + G+ G   +  F      V +A  ++    P 
Sbjct: 116 GIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPN 155


>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus
          norvegicus) [TaxId: 10116]}
          Length = 307

 Score = 25.3 bits (55), Expect = 1.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 54 SGGVPGNVLCGVLGLRKWQFD 74
           GG  GN L GV  +  W  +
Sbjct: 13 FGGTHGNELTGVFLVTHWLKN 33


>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE
          {Vibrio cholerae [TaxId: 666]}
          Length = 340

 Score = 24.6 bits (53), Expect = 2.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 54 SGGVPGNVLCGVLGLRKWQFDVWSDDVTLA 83
          S G+ G+    +  L KW  D+ S    +A
Sbjct: 57 SCGIHGDETAPMELLDKWIDDIVSGFQPVA 86


>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE
          {Escherichia coli [TaxId: 562]}
          Length = 322

 Score = 24.2 bits (52), Expect = 2.7
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 54 SGGVPGNVLCGVLGLRKWQFDVWSDDVTLA 83
          S G+ GN    V  L      +   ++ L 
Sbjct: 49 SAGIHGNETAPVEMLDALLGAISHGEIPLR 78


>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE
          {Vibrio parahaemolyticus [TaxId: 670]}
          Length = 339

 Score = 24.2 bits (52), Expect = 2.9
 Identities = 5/33 (15%), Positives = 11/33 (33%)

Query: 54 SGGVPGNVLCGVLGLRKWQFDVWSDDVTLANHM 86
          S G+ G+    +  +     D+ S    +    
Sbjct: 56 SCGIHGDETAPMELVDSIIKDIESGFQKVDARC 88


>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE
          {Chromobacterium violaceum [TaxId: 536]}
          Length = 331

 Score = 23.8 bits (51), Expect = 4.5
 Identities = 7/33 (21%), Positives = 13/33 (39%)

Query: 54 SGGVPGNVLCGVLGLRKWQFDVWSDDVTLANHM 86
          S GV GN    +  +     D+ +  + L   +
Sbjct: 51 SCGVHGNETAPIEVVDGMLTDIAAGQLALNCRL 83


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.139    0.467 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 371,331
Number of extensions: 14207
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 11
Length of query: 93
Length of database: 2,407,596
Length adjustment: 56
Effective length of query: 37
Effective length of database: 1,638,716
Effective search space: 60632492
Effective search space used: 60632492
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.2 bits)