BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10916
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2
Length = 3013
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 80 HDSTREFLWKRSSHIAHLVTEKLTSAARSLLQPIPSNTPHIPLPPPPSR 128
HDS + + +++A L+ + L+S +SLLQ I S HI L P++
Sbjct: 2172 HDSFSDTTFNLVTYLAELLEKGLSSMQQSLLQIIYSLLSHIDLSAAPAK 2220
>sp|Q8XLE8|CAPPA_CLOPE Phosphoenolpyruvate carboxylase OS=Clostridium perfringens (strain
13 / Type A) GN=ppcA PE=1 SV=1
Length = 537
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 51 LRVMHGGQATLHSIRVLQPK----QVRVDSQDDHDSTREFLWKRSSH 93
LR HG +AT H++R L+ K + R S++D D +EF+ S H
Sbjct: 273 LRYDHGEEATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKH 319
>sp|P0CQ56|RSSA_CRYNJ 40S ribosomal protein S0 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RPS0 PE=3
SV=1
Length = 292
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 58 QATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVT-----EKLTSAARSL 109
QAT I++L Q + +++ S ++WKR + H++ EKL AAR L
Sbjct: 11 QATEDDIQLLLAAQCHLGTKNCDKSMENYVWKRRADGIHVINVGKTWEKLVLAARVL 67
>sp|P0CQ57|RSSA_CRYNB 40S ribosomal protein S0 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RPS0 PE=3 SV=1
Length = 292
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 58 QATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVT-----EKLTSAARSL 109
QAT I++L Q + +++ S ++WKR + H++ EKL AAR L
Sbjct: 11 QATEDDIQLLLAAQCHLGTKNCDKSMENYVWKRRADGIHVINVGKTWEKLVLAARVL 67
>sp|Q67683|RDRP_GRVMC RNA-directed RNA polymerase OS=Groundnut rosette virus (strain MC1)
GN=ORF1-ORF2 PE=4 SV=2
Length = 839
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 2 GSIVAILGHLM------RMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGK---INLR 52
G I+ +LG L+ R L+ P G + +L+ A A M + + LR
Sbjct: 163 GRILRVLGTLLKPGACQRHLEDLREVQPQVCVGNPCEVKLQEEGAPMAYMNAQSIAMELR 222
Query: 53 VMHGGQATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHL 97
M G QA + R L + R +D +TRE +W SS H+
Sbjct: 223 AMFGWQAATPANRELGNRVARDILRDGCGATREQIWYMSSLALHM 267
>sp|Q9ULJ3|ZN295_HUMAN Zinc finger protein 295 OS=Homo sapiens GN=ZNF295 PE=1 SV=2
Length = 1066
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 108 SLLQPIPSNTPHIPLPPPPSRYPVYEEDNE 137
S L I S TP P P P+R V+ ED+E
Sbjct: 112 SFLTNIVSKTPQAPFPTCPNRKKVFVEDDE 141
>sp|Q197F0|VF380_IIV3 Probable serine/threonine-protein kinase 010L OS=Invertebrate
iridescent virus 3 GN=IIV3-010L PE=3 SV=1
Length = 559
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 54 MHGGQATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVTEKLTSAARSLLQPI 113
MH G SIR VRV + + + +LW S I +L ++ + ++ S+
Sbjct: 482 MHAGFHLPPSIREFLAPIVRVPTNSEAPKNKAWLWLASRLIHYLFSDWIDNSNDSIPYND 541
Query: 114 PSNTPHIPLPPPPSR 128
P + + PP SR
Sbjct: 542 PKFIEYYNVTPPKSR 556
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,679,993
Number of Sequences: 539616
Number of extensions: 1784157
Number of successful extensions: 9516
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 9464
Number of HSP's gapped (non-prelim): 80
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)