RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10918
(207 letters)
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 46.0 bits (108), Expect = 1e-07
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 16 HIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMT--NQSLVLQRVNRQSAG 73
++ V + P+ W K + + + + L + ++ G
Sbjct: 11 KVRAGESVELFGKVTGTQPI-TCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCG 69
Query: 74 NYTCVGFNIEGDGESNAFFLNVMYSP 99
YT + N G ++ L V+ P
Sbjct: 70 CYTLLVENKLGSRQAQV-NLTVVDKP 94
Score = 27.5 bits (60), Expect = 0.44
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYG 170
V E V + +V P + +W + + S S + + G
Sbjct: 12 VRAGESVELFGKVTGTQP-ITCTWMKFRKQIQES-EHMKVENSENGSKLTILAARQEHCG 69
Query: 171 TLICWGSNKIGHQRVPCVFHIV 192
NK+G ++ +V
Sbjct: 70 CYTLLVENKLGSRQAQVNLTVV 91
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 45.6 bits (107), Expect = 2e-07
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 16 HIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIM---TNQSLVLQRVNRQSA 72
+ + V F C P + W N K G + SL+++ V
Sbjct: 16 AVPAANTVKFRCPAGGNPMP-TMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDK 74
Query: 73 GNYTCVGFNIEGDGESNAFFLNVM 96
GNYTCV N G L+V+
Sbjct: 75 GNYTCVVENEYGSINHTY-HLDVV 97
Score = 39.4 bits (91), Expect = 3e-05
Identities = 14/88 (15%), Positives = 20/88 (22%), Gaps = 1/88 (1%)
Query: 105 QQRVLGVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPN 164
++R+ V V C NP W N +
Sbjct: 11 EKRLHAVPAANTVKFRCPAGGNPM-PTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESV 69
Query: 165 SELDYGTLICWGSNKIGHQRVPCVFHIV 192
D G C N+ G +V
Sbjct: 70 VPSDKGNYTCVVENEYGSINHTYHLDVV 97
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 43.8 bits (102), Expect = 7e-07
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 5 RLTLGRSLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVL 64
+L + P KE D CD+V+ P + + + I+++N L +
Sbjct: 1 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 60
Query: 65 QRVNRQSAGNYTCVGFNIEGDGESNAFFLNV 95
+ + + G Y C G + GE N + V
Sbjct: 61 RGIKKTDEGTYRCEGRILAR-GEINFKDIQV 90
Score = 24.1 bits (51), Expect = 6.7
Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 3/71 (4%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYG 170
E I C+V ++ P + +L + L + D G
Sbjct: 13 FKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKT---DEG 69
Query: 171 TLICWGSNKIG 181
T C G
Sbjct: 70 TYRCEGRILAR 80
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 43.7 bits (102), Expect = 8e-07
Identities = 19/85 (22%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Query: 16 HIKEDSDVYFDCDIVAVP-PVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGN 74
+ E F C ++A PV + + L + RV G
Sbjct: 12 EVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGE 71
Query: 75 YTCVGFNIEGDGESNAFFLNVMYSP 99
YT N G E FLNV
Sbjct: 72 YTVRAKNSYGTKEEIV-FLNVTRHS 95
Score = 28.3 bits (62), Expect = 0.25
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 8/91 (8%)
Query: 111 VARQEKVNISCEVDANP-PDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDY 169
V + N C V A+ P V + ++V + + L+ + D
Sbjct: 13 VGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLT---INRVKGDDK 69
Query: 170 GTLICWGSNKIGHQRVPCVFHIVSAVTFHPP 200
G N G + + VT H
Sbjct: 70 GEYTVRAKNSYGTKEEIVFLN----VTRHSE 96
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 42.8 bits (100), Expect = 1e-06
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 12 LNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQS 71
+K+ DV C + +P V W HN K L +T+ LV++ V
Sbjct: 10 EKVIVVKQGQDVTIPCKVTGLPA-PNVVWSHNAKPLSGG---RATVTDSGLVIKGVKNGD 65
Query: 72 AGNYTCVGFNIEGDGESNAFFLNV 95
G Y C N GD + V
Sbjct: 66 KGYYGCRATNEHGDKYFET-LVQV 88
Score = 27.0 bits (59), Expect = 0.57
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 98 SPTCKPHQQRVLGVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLS 157
+P + ++V+ V + + V I C+V P W+ N + L
Sbjct: 2 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPA-PNVVWSHNA---KPLSGGRATVTDSGLV 57
Query: 158 VVAYSPNSELDYGTLICWGSNKIG 181
+ D G C +N+ G
Sbjct: 58 IKGVKNG---DKGYYGCRATNEHG 78
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 42.2 bits (98), Expect = 2e-06
Identities = 15/77 (19%), Positives = 26/77 (33%)
Query: 18 KEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTC 77
+ V C A PP + + ++ ++ ++ V + AG+Y C
Sbjct: 20 SAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQC 79
Query: 78 VGFNIEGDGESNAFFLN 94
V N G S L
Sbjct: 80 VATNARGTVVSREASLR 96
Score = 30.3 bits (67), Expect = 0.045
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 102 KPHQQRVLGVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAY 161
+P + +EKV ++C ANPP + ++ ++ +
Sbjct: 10 QPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPV 69
Query: 162 SPNSELDYGTLICWGSNKIG 181
G+ C +N G
Sbjct: 70 KAKDA---GSYQCVATNARG 86
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 41.9 bits (97), Expect = 3e-06
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 14 PDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAG 73
+ + E ++ C VYKV + + + L + N ++ + + +G
Sbjct: 9 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------YENHNISITNATVEDSG 62
Query: 74 NYTCVGFNIEGDGESNAFFLNVMYSP 99
Y C G + D ES + V+ +P
Sbjct: 63 TYYCTGKVWQLDYESEPLNITVIKAP 88
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 41.0 bits (95), Expect = 7e-06
Identities = 16/80 (20%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Query: 17 IKEDSDVYFDCDIVAVP-PVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNY 75
+ E F CD P P + + + + V GNY
Sbjct: 11 VYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNY 70
Query: 76 TCVGFNIEGDGESNAFFLNV 95
+ V N EG E+ L +
Sbjct: 71 SVVVENSEGKQEAEF-TLTI 89
Score = 26.7 bits (58), Expect = 0.90
Identities = 14/81 (17%), Positives = 20/81 (24%), Gaps = 2/81 (2%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYG 170
V E SC+ D P +W + + + S + D G
Sbjct: 11 VYEGESARFSCDTDGEPV-PTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQAS-DEG 68
Query: 171 TLICWGSNKIGHQRVPCVFHI 191
N G Q I
Sbjct: 69 NYSVVVENSEGKQEAEFTLTI 89
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 41.1 bits (95), Expect = 7e-06
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 3/82 (3%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIM---TNQSLVLQRVNRQSAG 73
+ + V +C + + + + + + L L+ V R AG
Sbjct: 8 VSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAG 67
Query: 74 NYTCVGFNIEGDGESNAFFLNV 95
Y C + S +L V
Sbjct: 68 RYWCQVEDGGETEISQPVWLTV 89
Score = 28.8 bits (63), Expect = 0.18
Identities = 7/71 (9%), Positives = 21/71 (29%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYG 170
V++ + V ++C V+ + ++ + + ++ D G
Sbjct: 8 VSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAG 67
Query: 171 TLICWGSNKIG 181
C +
Sbjct: 68 RYWCQVEDGGE 78
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 39.6 bits (91), Expect = 2e-05
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYT 76
++ +DV F C + P Y + W + + + N L ++ V AG Y
Sbjct: 14 VRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---RAMDFNGILTIRNVQPSDAGTYV 70
Query: 77 CVGFNIEGDGESNA 90
C G N+ + A
Sbjct: 71 CTGSNMFAMDQGTA 84
Score = 25.3 bits (54), Expect = 2.5
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 105 QQRVLGVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPN 164
+QR V V C + P WT ++ + + + +G L++ P+
Sbjct: 8 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---RAMDFNGILTIRNVQPS 64
Query: 165 SELDYGTLICWGSNKIGHQRVPCVFHI 191
Y +C GSN + H+
Sbjct: 65 DAGTY---VCTGSNMFAMDQGTATLHV 88
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 39.6 bits (91), Expect = 2e-05
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTN-QSLVLQRVNRQSAGNY 75
+E++ +C I K W+ + K+ + + + SLV R G+Y
Sbjct: 14 FRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHY 73
Query: 76 TCVGFNIEGDGESNAFFLNV 95
C G S
Sbjct: 74 QCFAETPAGVASSRVISFRK 93
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 39.6 bits (91), Expect = 3e-05
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYT 76
+KE V C + ++W N+++L + N L + + R+ AG Y
Sbjct: 15 VKELDSVTLTCLSNDIGA--NIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQ 72
Query: 77 CVGFNIEGDGESNAFFLNVMYSPT 100
C N SN+ L++++ P+
Sbjct: 73 CEISNPVSVRRSNSIKLDIIFDPS 96
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 38.7 bits (89), Expect = 5e-05
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Query: 17 IKEDSDVYFDCDIVAVPP---VYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAG 73
K C + P Y + N I + + + L+ + + G
Sbjct: 15 AKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEG 74
Query: 74 NYTCVGFNIEGDGESNAFFLNVM 96
YTC N G + ++ L V+
Sbjct: 75 VYTCEVDNGVGKPQKHSLKLTVV 97
Score = 24.1 bits (51), Expect = 8.5
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 115 EKVNISCEVDANP-PDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYGTLI 173
+ I C +NP + + R+ ++ + E D G
Sbjct: 19 DVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPE-DEGVYT 77
Query: 174 CWGSNKIGHQR 184
C N +G +
Sbjct: 78 CEVDNGVGKPQ 88
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 38.3 bits (88), Expect = 7e-05
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 10 RSLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSL---VLQR 66
+ + + SD +F +V P + EW N + + ++ V++
Sbjct: 9 ERIQSQTVGQGSDAHFRVRVVGKPDP-ECEWYKNGVKIERSDRIYWYWPEDNVCELVIRD 67
Query: 67 VNRQSAGNYTCVGFNIEGDGESNAFFLNV 95
V + + + NI G+ S+A FL V
Sbjct: 68 VTGEDSASIMVKAINIAGETSSHA-FLLV 95
Score = 26.4 bits (57), Expect = 1.1
Identities = 8/72 (11%), Positives = 18/72 (25%), Gaps = 1/72 (1%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYG 170
V + + V P + W N + + + + D
Sbjct: 16 VGQGSDAHFRVRVVGKPD-PECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSA 74
Query: 171 TLICWGSNKIGH 182
+++ N G
Sbjct: 75 SIMVKAINIAGE 86
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 37.2 bits (85), Expect = 1e-04
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 6/82 (7%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYT 76
KE+ ++ C ++KV + N K + N + + + +G+Y
Sbjct: 14 FKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF------HHNSDFHIPKATLKDSGSYF 67
Query: 77 CVGFNIEGDGESNAFFLNVMYS 98
C G + S + + +
Sbjct: 68 CRGLVGSKNVSSETVNITITQA 89
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 37.3 bits (85), Expect = 2e-04
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Query: 12 LNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQ----SLVLQRV 67
+ + F C + W + + + +++ S +
Sbjct: 8 IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNT 67
Query: 68 NRQSAGNYTCVGFNIEGDGESNAFFLNV 95
++ AG Y C+ G G SN L V
Sbjct: 68 TKRDAGKYRCMIRTEGGVGISNYAELVV 95
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 36.8 bits (84), Expect = 2e-04
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 10 RSLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNR 69
+ SD+ + C P R N + ++ L ++
Sbjct: 6 DVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIE---VSGGELRFSKLVL 62
Query: 70 QSAGNYTCVGFNIEGDGESNAFFLNV 95
+ +G Y CV N G ++A L V
Sbjct: 63 EDSGMYQCVAENKHGTVYASA-ELTV 87
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 36.4 bits (83), Expect = 3e-04
Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYT 76
V C V V W + + L+L+ V +GNY+
Sbjct: 18 SLPGDSVTLTCPGVEPEDNATVHWVLRKPA-AGSHPSRWAGMGRRLLLRSVQLHDSGNYS 76
Query: 77 CV 78
C
Sbjct: 77 CY 78
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 36.0 bits (82), Expect = 5e-04
Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 2 PETRLTLGRSLNPDHIKEDSDVYFDCDIVA--VPPVYKVEWRHNNKTLHHNIAQGIIMTN 59
P + +++ + E S FDC + P V + + K H N
Sbjct: 5 PHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGN 64
Query: 60 QSLVLQRVNRQSAGNYTCVGFNIEGDGESNAFFLNV 95
SL + V YTC N G+ A L V
Sbjct: 65 CSLTISEVCGDDDAKYTCKAVNSLGEATCTA-ELLV 99
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 35.6 bits (81), Expect = 5e-04
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 5/75 (6%)
Query: 16 HIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNY 75
+ V +C P +++WR + + + L +Q V+ + G Y
Sbjct: 16 YALTGQMVTLECFAFGNPVP-QIKWRKL----DGSQTSKWLSSEPLLHIQNVDFEDEGTY 70
Query: 76 TCVGFNIEGDGESNA 90
C NI+G
Sbjct: 71 ECEAENIKGRDTYQG 85
Score = 29.8 bits (66), Expect = 0.076
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 97 YSPTCKPHQQRVLGVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTL 156
Y+P+ K + V + C NP + S + ++ +L
Sbjct: 3 YAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLH---- 58
Query: 157 SVVAYSPNSELDYGTLICWGSNKIG 181
D GT C N G
Sbjct: 59 ----IQNVDFEDEGTYECEAENIKG 79
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 36.1 bits (82), Expect = 5e-04
Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 10/87 (11%)
Query: 14 PDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTL----------HHNIAQGIIMTNQSLV 63
P + + C P + W + ++ N + I + L+
Sbjct: 11 PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLI 70
Query: 64 LQRVNRQSAGNYTCVGFNIEGDGESNA 90
V +G Y C N G +
Sbjct: 71 FDPVTAFDSGEYYCQAQNGYGTAMRSE 97
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 35.3 bits (80), Expect = 7e-04
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYT 76
+E + C P+ KV + N K+ + ++ + + + N +G+Y
Sbjct: 12 FQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFS------RSDPNFSIPQANHSHSGDYH 65
Query: 77 CVGFNIEGDGESNAFFLNVMY 97
C G S + V
Sbjct: 66 CTGNIGYTLYSSKPVTITVQA 86
Score = 24.1 bits (51), Expect = 5.7
Identities = 10/74 (13%), Positives = 19/74 (25%), Gaps = 9/74 (12%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYG 170
E + + C + P VK ++ N S + + + G
Sbjct: 12 FQEGETIVLRCHSWKDKPLVKVTFFQNGK---------SKKFSRSDPNFSIPQANHSHSG 62
Query: 171 TLICWGSNKIGHQR 184
C G+
Sbjct: 63 DYHCTGNIGYTLYS 76
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 34.4 bits (78), Expect = 0.001
Identities = 7/75 (9%), Positives = 20/75 (26%)
Query: 10 RSLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNR 69
+ L + +F+ ++ + + + T + L+L
Sbjct: 6 KPLYGVEVFVGETAHFEIELSEPDVHGQWKLKGQPLTASPDCEIIEDGKKHILILHNCQL 65
Query: 70 QSAGNYTCVGFNIEG 84
G + N +
Sbjct: 66 GMTGEVSFQAANAKS 80
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 34.4 bits (78), Expect = 0.001
Identities = 8/77 (10%), Positives = 19/77 (24%), Gaps = 2/77 (2%)
Query: 10 RSLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGII--MTNQSLVLQRV 67
+ L V +C++ K I L+++
Sbjct: 5 KQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGA 64
Query: 68 NRQSAGNYTCVGFNIEG 84
+ A Y+ + +
Sbjct: 65 TKADAAEYSVMTTGGQS 81
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 35.0 bits (79), Expect = 0.002
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 15/94 (15%)
Query: 17 IKEDSDVYFDCDIVAVPPV--------------YKVEWRHNNKTLHHNIAQGIIMTNQSL 62
DV F C + + Y + K L + L
Sbjct: 17 TVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVL 76
Query: 63 VLQRVNRQSAGNYTCVGFNIEGDGESNAFFLNVM 96
++ V + AG YTC+ N G +A +L V+
Sbjct: 77 YIRNVTFEDAGEYTCLAGNSIGISFHSA-WLTVL 109
Score = 26.1 bits (56), Expect = 1.9
Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 11/93 (11%)
Query: 111 VARQEKVNISCEVDANP-PDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYS------- 162
V C+V ++ P +++ + L+ + V +
Sbjct: 17 TVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVL 76
Query: 163 ---PNSELDYGTLICWGSNKIGHQRVPCVFHIV 192
+ D G C N IG ++
Sbjct: 77 YIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVL 109
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 34.2 bits (77), Expect = 0.002
Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 14 PDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSL---------VL 64
P + C P + W + + N +N S V
Sbjct: 11 PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVF 70
Query: 65 QRVNRQSAGNYTCVGFNIEGDGESNA 90
++ G Y+C N G ++
Sbjct: 71 DPLSASDTGEYSCEARNGYGTPMTSN 96
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 33.7 bits (76), Expect = 0.003
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 21 SDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMT----NQSLVLQRVNRQSAGNYT 76
V CD P + W + + + + + L ++ V++ Y
Sbjct: 21 QSVTLVCDADGFPEP-TMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYV 79
Query: 77 CVGFNIEGDGESNAFFLNV 95
C+ N G+ +++ L V
Sbjct: 80 CIAENKAGEQDASI-HLKV 97
Score = 33.7 bits (76), Expect = 0.003
Identities = 18/94 (19%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Query: 99 PTCKPHQQRVLGVARQ-EKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLS 157
PT + Q V A + V + C+ D P E + S S
Sbjct: 4 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 63
Query: 158 VVAYSPNSELDYGTLICWGSNKIGHQRVPCVFHI 191
+ + D +C NK G Q +
Sbjct: 64 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 97
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 32.6 bits (73), Expect = 0.006
Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 7/80 (8%)
Query: 16 HIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNY 75
+ ++ C+ V P + W + VL + +
Sbjct: 12 AVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP-------APSPSVLNVTGVTQSTMF 64
Query: 76 TCVGFNIEGDGESNAFFLNV 95
+C N++G S +++
Sbjct: 65 SCEAHNLKGLASSRTATVHL 84
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 33.1 bits (74), Expect = 0.006
Identities = 15/86 (17%), Positives = 23/86 (26%), Gaps = 7/86 (8%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQS-------LVLQRVNR 69
I +C + V W N T + + L + V
Sbjct: 15 ILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLP 74
Query: 70 QSAGNYTCVGFNIEGDGESNAFFLNV 95
G+Y C ES++ L V
Sbjct: 75 NDNGSYRCSANFQSNLIESHSTTLYV 100
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 32.7 bits (74), Expect = 0.007
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 17/99 (17%)
Query: 14 PDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQ------------- 60
P + ED++V + + ++ N + IA+ + +N
Sbjct: 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREII 67
Query: 61 ----SLVLQRVNRQSAGNYTCVGFNIEGDGESNAFFLNV 95
SL+ Q + + G YT + +V
Sbjct: 68 YSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 32.1 bits (72), Expect = 0.010
Identities = 8/77 (10%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Query: 10 RSLNPDH-IKEDSDVYFDCDIVAVPPVYKVEWR-HNNKTLHHNIAQGIIMTNQSLVLQRV 67
+ L P + + + + ++ K + I ++L + +
Sbjct: 10 KKLEPAYQVSKGHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQC 69
Query: 68 NRQSAGNYTCVGFNIEG 84
+ Y CV +
Sbjct: 70 SLADDAAYQCVVGGEKC 86
Score = 24.8 bits (53), Expect = 4.0
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Query: 106 QRVLGVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNS 165
+ V++ K+ ++ E+ + +VK W N ++ ++ G + S S
Sbjct: 13 EPAYQVSKGHKIRLTVELADHDAEVK--WLKNGQEIQMSGSKYIFESIGAKRTLTISQCS 70
Query: 166 ELDYGTLICWGSNKIGHQRV 185
D C + +
Sbjct: 71 LADDAAYQCVVGGEKCSTEL 90
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 32.0 bits (71), Expect = 0.013
Identities = 18/89 (20%), Positives = 27/89 (30%), Gaps = 10/89 (11%)
Query: 16 HIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQ------GIIMTNQSLVLQRVN- 68
HI E C +VPPV W + + + + L N
Sbjct: 13 HINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENL 72
Query: 69 --RQSAGNYTCVGFNIEGDGESNAFFLNV 95
G Y C G + +G ++ L V
Sbjct: 73 NMEADPGQYRCNGTSSKGSDQAII-TLRV 100
Score = 25.8 bits (55), Expect = 1.7
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 111 VARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILR------SGTLSVVAYSPN 164
+ E + C+ ++ PP ++W +E + R G + + N
Sbjct: 14 INEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLN 73
Query: 165 SELDYGTLICWGSNKIGHQRVPCVFHI 191
E D G C G++ G + +
Sbjct: 74 MEADPGQYRCNGTSSKGSDQAIITLRV 100
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.8 bits (71), Expect = 0.015
Identities = 6/88 (6%), Positives = 15/88 (17%), Gaps = 2/88 (2%)
Query: 14 PDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLH-HNIAQGIIMTNQSLVLQRVNRQSA 72
P + C + P ++ + +
Sbjct: 13 PSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHG 72
Query: 73 GNYTCVGFNIEGDGESNAFFLNVMYSPT 100
++C + F N
Sbjct: 73 AQFSCRTELDLRP-QGLELFENTSAPYQ 99
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 31.4 bits (70), Expect = 0.020
Identities = 10/75 (13%), Positives = 20/75 (26%), Gaps = 2/75 (2%)
Query: 18 KEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQG--IIMTNQSLVLQRVNRQSAGNY 75
+ C + + W ++ + Q I + L + +G+Y
Sbjct: 15 SANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHY 74
Query: 76 TCVGFNIEGDGESNA 90
CV N
Sbjct: 75 YCVVRNSSYCLRIKI 89
Score = 27.2 bits (59), Expect = 0.73
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 100 TCKPHQQRVLGVARQ-EKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSV 158
CK +++++ V+ E C ++ N +W ++S V+ QA +
Sbjct: 2 KCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHK-EK 60
Query: 159 VAYSPNSELDYGTLICWGSNKIGHQRVPCVFHIV 192
+ + P D G C N R+ V
Sbjct: 61 LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 94
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 30.8 bits (68), Expect = 0.031
Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 11 SLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQ 70
S K C + W+ N L + +M ++L++ ++
Sbjct: 3 SYRQHFFKHGGTAELKCSQKSNLARVF--WKFQNGVLKAESPKYGLMGRKNLLIFNLSEG 60
Query: 71 SAGNYTCVGFNIEG 84
+G Y C+
Sbjct: 61 DSGVYQCLSEERVK 74
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 29.5 bits (65), Expect = 0.092
Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 17/91 (18%)
Query: 18 KEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIM------------TNQSLVLQ 65
+V F P+ +V W+ + + SL +
Sbjct: 8 VVYGNVTFHVPSNV--PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIY 65
Query: 66 RVNRQSAGNYTCVGFNIEGDGESNAFFLNVM 96
+ Y NI + FFL V+
Sbjct: 66 NLTSSDEDEYEMESPNITD---TMKFFLYVL 93
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 28.5 bits (62), Expect = 0.19
Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Query: 17 IKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMT-----NQSLVLQRVNRQS 71
I +F C + + W N Q I + + +L + N
Sbjct: 12 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDD 71
Query: 72 AGNYTCVGFNIEGDGESNAFFLNV 95
AG Y CV +G + +
Sbjct: 72 AGIYKCVVTAEDGTQSEATVNVKI 95
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 28.5 bits (62), Expect = 0.21
Identities = 11/65 (16%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Query: 33 PPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTCVGFNIEGDGESNAFF 92
N + A + ++ + V R+ G YTC+ G
Sbjct: 38 VQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSI 97
Query: 93 -LNVM 96
L V+
Sbjct: 98 HLTVL 102
>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 102
Score = 28.0 bits (62), Expect = 0.32
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 114 QEKVNISCEV-DANPPDVKFSWTFNNSAETVNVAQAHILRSG 154
+++V ++C V D P D+ WT N E +L S
Sbjct: 19 KKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSD 60
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast
(Pichia pastoris) [TaxId: 4922]}
Length = 460
Score = 28.4 bits (63), Expect = 0.61
Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Query: 110 GVARQEKVNISCEVDANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDY 169
+ + +N+ D F + F + + +G + ++P + Y
Sbjct: 145 AITQNPTLNVRFISTIGNYDYNFLYKFFLDG----TLEVSVRAAGYIQAGYWNPETSAPY 200
Query: 170 GTLICWGSNKIGHQRVPCV 188
G I + H V
Sbjct: 201 GLKIHDVLSGSFHDHVLNY 219
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 27.7 bits (60), Expect = 0.64
Identities = 9/87 (10%), Positives = 19/87 (21%), Gaps = 3/87 (3%)
Query: 12 LNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMT--NQSLVLQRVNR 69
+ D + T ++ +
Sbjct: 44 QKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEK 103
Query: 70 QSAGNYTCVGFNIEGDGESNAFFLNVM 96
+ G YT N G+ + N + V+
Sbjct: 104 EDEGVYTVTVKNPVGEDQVNL-TVKVI 129
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 27.0 bits (59), Expect = 0.77
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 56 IMTNQSLVLQRVNRQSAGNYTCVGFNIEGDGESNA-FFLNVM 96
I+ N L ++ + R +G Y ++ G N L ++
Sbjct: 56 ILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRIL 97
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 26.5 bits (58), Expect = 0.96
Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Query: 33 PPVYKVEWRHNNKTLHHNIAQGIIMTN-----QSLVLQRVNRQSAGNYTCV 78
PPV V W N + + +++ + + + + Y C
Sbjct: 33 PPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCE 83
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 26.9 bits (58), Expect = 1.1
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 23 VYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTCVGFNI 82
V+ + E+R + L +I +G +L +Q V G YTC +
Sbjct: 48 VHLYRNGKDQDAEQAPEYRGRTELLKESIGEG----KVALRIQNVRFSDEGGYTCFFRDH 103
Query: 83 EGDGESNAFFLNVMYSP 99
E+ L V
Sbjct: 104 SYQEEAAV-ELKVEDPF 119
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 26.5 bits (58), Expect = 1.2
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Query: 33 PPVYKVEWRHNNKTLHHNIAQGIIMTN-----QSLVLQRVNRQSAGNYTCV 78
PPV + W N +++ +++ ++ + + Y C
Sbjct: 33 PPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCK 83
Score = 24.2 bits (52), Expect = 7.8
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 114 QEKVNISCEVDA-NPPDVKFSWTFNNSAETVNVAQAHILRSG-----TLSVVAYSPNSEL 167
+ + C VD PP V +W N + T V++ L +S + + P+++
Sbjct: 19 GQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADE 78
Query: 168 DY 169
Y
Sbjct: 79 IY 80
>d1i1ra1 b.1.2.1 (A:2-101) Cytokine receptor gp130
cytokine-binding domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 100
Score = 26.4 bits (58), Expect = 1.3
Identities = 6/39 (15%), Positives = 13/39 (33%)
Query: 40 WRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTCV 78
W+ N+ T+ I T S+ + + +
Sbjct: 44 WKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNI 82
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 25.8 bits (55), Expect = 1.4
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Query: 40 WRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTCVGFNIEGDGESNAFFLNV 95
+ + T + TN SL + + +G Y C + S +L V
Sbjct: 28 FFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNE---SEPVYLEV 80
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 25.8 bits (56), Expect = 1.5
Identities = 6/46 (13%), Positives = 17/46 (36%)
Query: 33 PPVYKVEWRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTCV 78
P ++ + K + A I + + ++ + + + TC
Sbjct: 27 PKDIRINLVSSKKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCS 72
Score = 23.8 bits (51), Expect = 8.3
Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 114 QEKVNISCEVDA-NPPDVKFSWTFNNSAETVNVA 146
+ N++C V P D++ + + + A
Sbjct: 13 KNGTNVACLVKEFYPKDIRINLVSSKKITEFDPA 46
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 26.1 bits (57), Expect = 1.5
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Query: 33 PPVYKVEWRHNNKTLHHNIAQGIIMTN-----QSLVLQRVNRQSAGNYTCV 78
P + WR N K + H+ A N Q+L + YTCV
Sbjct: 31 PAEVTITWRKNGKLVMHSSAHKTAQPNGDWTYQTLSHLALTPSYGDTYTCV 81
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 89
Score = 25.7 bits (56), Expect = 1.8
Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 115 EKVNISCEVDA-NPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYS 162
+KV + C P D+ +W N ++ +G + ++
Sbjct: 16 DKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWA 64
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes
[TaxId: 223]}
Length = 124
Score = 26.2 bits (57), Expect = 1.8
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 19 EDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTNQ 60
+D + F+ + V P V + +K + +G+I
Sbjct: 12 KDGAMVFEPASLKVAPGDTVTFIPTDKGHNVETIKGMIPDGA 53
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 104
Score = 25.4 bits (55), Expect = 2.6
Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 8/64 (12%)
Query: 114 QEKVNISCEVDAN-PPDVKFSWTFNNSAETVNVAQAHILRSG-------TLSVVAYSPNS 165
K + C V+ P +W N + V + G LS+ A S
Sbjct: 20 TNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKS 79
Query: 166 ELDY 169
Sbjct: 80 HNRV 83
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Length = 100
Score = 25.4 bits (55), Expect = 2.8
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 114 QEKVNISCEVDA-NPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSP 163
+ + C VD PP + +W N+ + V + + S S
Sbjct: 17 GQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSY 67
Score = 23.8 bits (51), Expect = 8.2
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 5/51 (9%)
Query: 33 PPVYKVEWRHNNKTLHHNIAQGIIMTN-----QSLVLQRVNRQSAGNYTCV 78
PPV + W N+K++ + + N L Y C
Sbjct: 31 PPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCK 81
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 24.9 bits (53), Expect = 3.2
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 3/56 (5%)
Query: 40 WRHNNKTLHHNIAQGIIMTNQSLVLQRVNRQSAGNYTCVGFNIEGDGESNAFFLNV 95
+N T + I S + +G Y C S+ L V
Sbjct: 32 SPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTL---SDPVQLEV 84
>d2saka_ d.15.5.1 (A:) Staphylokinase {Staphylococcus aureus
[TaxId: 1280]}
Length = 121
Score = 25.2 bits (55), Expect = 3.6
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 3 ETRLTLGRSLNPDHIKE------DSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGII 56
E + G +L + I+ D+ Y + +V + P K+E + +K +
Sbjct: 31 EFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFP 90
Query: 57 MTNQSLV 63
+T + V
Sbjct: 91 ITEKGFV 97
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II
{Streptomyces exfoliatus [TaxId: 1905]}
Length = 273
Score = 25.9 bits (55), Expect = 4.3
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 132 FSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNS-ELDYGTLICWGSNKIGHQRVPCVFH 190
+W NN V +SG ++ + L G ++ WG+N G +P
Sbjct: 7 VAWGGNNDWGEATVPAE--AQSGVDAIAGGYFHGLALKGGKVLGWGANLNGQLTMPAATQ 64
>d1mjul2 b.1.1.2 (L:108-214) Immunoglobulin light chain kappa
constant domain, CL-kappa {Mouse (Mus musculus) [TaxId:
10090]}
Length = 107
Score = 25.0 bits (54), Expect = 4.4
Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 10/66 (15%)
Query: 114 QEKVNISCEV-DANPPDVKFSWTFNNSAETVNVAQAHILR---------SGTLSVVAYSP 163
++ C + + P D+ W + S V + + S TL++
Sbjct: 20 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY 79
Query: 164 NSELDY 169
Y
Sbjct: 80 ERHNSY 85
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 25.0 bits (53), Expect = 4.6
Identities = 12/79 (15%), Positives = 19/79 (24%), Gaps = 9/79 (11%)
Query: 19 EDSDVYFDCDIVAVPPVYKVEWRHNNKTL---------HHNIAQGIIMTNQSLVLQRVNR 69
E DC + P + W+ I G ++ + +
Sbjct: 16 EGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDV 75
Query: 70 QSAGNYTCVGFNIEGDGES 88
Y C N D E
Sbjct: 76 SDIYKYVCTAKNAAVDEEV 94
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 243
Score = 25.4 bits (55), Expect = 5.0
Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 1/57 (1%)
Query: 3 ETRLTLGRSLNPDHIKEDSDVYFDCDIVAVPPVYKVEWRHNNKTLHHNIAQGIIMTN 59
R+ +G L +E D+ D I + L QG +
Sbjct: 24 SARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARI-LGKPYRQGFVKNR 79
>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DR group [TaxId:
9606]}
Length = 98
Score = 24.2 bits (52), Expect = 7.5
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 114 QEKVNISCEVDA-NPPDVKFSWTFNNSAETVNVAQAHILRSG-----TLSVVAYSPNSEL 167
Q + C V+ P ++ W N E V ++++G TL ++ P S
Sbjct: 18 QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGE 77
Query: 168 DY 169
Y
Sbjct: 78 VY 79
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 23.9 bits (51), Expect = 7.9
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 114 QEKVNISCEV-DANPPDVKFSWTFNNSAETVNV 145
K + C + D P V W + + T +
Sbjct: 20 TAKATLVCTITDFYPGVVTVDWKVDGTPVTAGM 52
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 24.1 bits (51), Expect = 8.1
Identities = 11/103 (10%), Positives = 27/103 (26%), Gaps = 5/103 (4%)
Query: 103 PHQQRVLGVARQEKVNISCEVDANP-PDVKFSWTF----NNSAETVNVAQAHILRSGTLS 157
P ++ I VD P P +++ + S + +
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHG 63
Query: 158 VVAYSPNSELDYGTLICWGSNKIGHQRVPCVFHIVSAVTFHPP 200
+ + + ++ G +N G + + P
Sbjct: 64 CLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNP 106
>d1de4a1 b.1.1.2 (A:182-275) Hemochromatosis protein Hfe, alpha-3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 23.8 bits (51), Expect = 8.3
Identities = 15/102 (14%), Positives = 25/102 (24%), Gaps = 18/102 (17%)
Query: 107 RVLGVARQEKVNISCEV-DANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNS 165
+V + C + P ++ W + + + PN
Sbjct: 8 KVTHHVTSSVTTLRCRALNYYPQNITMKWLKDK----------QPMDAKEFEPKDVLPNG 57
Query: 166 ELDYGTLICWGSNKIGHQRVPCVFHIVSAVTFHPPFNQKLTR 207
+ Y I QR C HP +Q L
Sbjct: 58 DGTYQGWITLAVPPGEEQRYTCQVE-------HPGLDQPLIV 92
>d1t6la2 d.131.1.2 (A:136-270) UL44 {Human cytomegalovirus, HHV-5
[TaxId: 10359]}
Length = 135
Score = 24.1 bits (52), Expect = 9.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 123 VDANPPDVKFSWTFNNSAETVN 144
V A PP +KF T + E +
Sbjct: 49 VHAGPPAIKFILTNGSELEFTS 70
>d1ogae2 b.1.1.2 (E:119-245) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 127
Score = 24.0 bits (51), Expect = 9.3
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 111 VARQEKVNISCEV-DANPPDVKFSWTFNNSAETVNV 145
++ +K + C P V+ SW N V
Sbjct: 17 ISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV 52
>d1pfca_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Guinea pig (Cavia porcellus)
[TaxId: 10141]}
Length = 111
Score = 23.8 bits (51), Expect = 9.5
Identities = 7/32 (21%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 114 QEKVNISCEV-DANPPDVKFSWTFNNSAETVN 144
++KV+++C + P D+ W + ++ N
Sbjct: 27 KKKVSLTCMITGFYPADINVEWDSSEPSDYKN 58
>d3frua1 b.1.1.2 (A:179-269) Fc (IgG) receptor, alpha-3 domain {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 23.4 bits (50), Expect = 9.9
Identities = 10/63 (15%), Positives = 17/63 (26%), Gaps = 1/63 (1%)
Query: 114 QEKVNISCEV-DANPPDVKFSWTFNNSAETVNVAQAHILRSGTLSVVAYSPNSELDYGTL 172
++C PP++KF + N A G+ + D
Sbjct: 15 SGSSVLTCAAFSFYPPELKFRFLRNGLASGSGNCSTGPNGDGSFHAWSLLEVKRGDEHHY 74
Query: 173 ICW 175
C
Sbjct: 75 QCQ 77
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.419
Gapped
Lambda K H
0.267 0.0569 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 766,208
Number of extensions: 32777
Number of successful extensions: 202
Number of sequences better than 10.0: 1
Number of HSP's gapped: 194
Number of HSP's successfully gapped: 107
Length of query: 207
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 126
Effective length of database: 1,295,466
Effective search space: 163228716
Effective search space used: 163228716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.8 bits)