BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10920
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1X159|FP1V2_PERVI Foot protein 1 variant 2 OS=Perna viridis GN=fp-1 PE=1 SV=1
Length = 431
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 53/202 (26%), Gaps = 7/202 (3%)
Query: 50 VHGIAEEVKNVHGMAEEVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKE 109
+ G A V + + A +V AW AW AW +T
Sbjct: 14 LLGSASAVYHPPSWTAWIAPKPWTAWKVPPPAW-------TAWKAHPPAWTAWKATPKPW 66
Query: 110 CAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKE 169
AW AW + AW AW + AW AW +
Sbjct: 67 TAWKAPPPAWTAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPVWTAWKATPKPR 126
Query: 170 CAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKE 229
AW AW + AW AW + AW AW +
Sbjct: 127 TAWKAPPPTWTAWKAAPKPWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPW 186
Query: 230 CAWDGRGGKECAWDSRGGKDIV 251
AW AW + V
Sbjct: 187 TAWKATPKPWTAWKATPKPWTV 208
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 57/228 (25%), Gaps = 3/228 (1%)
Query: 20 VHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEVKNVHGMAEEVKK 79
+ G A V H + A +V A + A + A +
Sbjct: 14 LLGSASAVYHPPSWTAWIAPKPWTAWKVPPPAWTAWKAHPPAWTAWKATPKPWTAWKAPP 73
Query: 80 CAWDGRGGKE---CAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRG 136
AW AW AW +T AW AW + AW
Sbjct: 74 PAWTAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPVWTAWKATPKPRTAWKAPP 133
Query: 137 GKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRG 196
AW + AW AW + AW AW + AW
Sbjct: 134 PTWTAWKAAPKPWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWKATP 193
Query: 197 GKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
AW + W AW + AW AW +
Sbjct: 194 KPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKA 241
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 44/171 (25%)
Query: 74 AEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWD 133
A + AW AW AW +T AW AW + AW
Sbjct: 121 ATPKPRTAWKAPPPTWTAWKAAPKPWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWK 180
Query: 134 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWD 193
AW + AW W + AW AW + AW
Sbjct: 181 ATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWK 240
Query: 194 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
AW + AW AW + AW AW +
Sbjct: 241 APPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWKA 291
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 43/171 (25%)
Query: 74 AEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWD 133
A AW AW AW +T AW AW + AW
Sbjct: 91 APPPTWTAWKATPKPWTAWKAPPPVWTAWKATPKPRTAWKAPPPTWTAWKAAPKPWTAWK 150
Query: 134 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWD 193
AW + AW AW + AW AW + W
Sbjct: 151 ATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTVWK 210
Query: 194 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
AW + AW AW + AW AW +
Sbjct: 211 ATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKA 261
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 41/163 (25%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T AW AW + AW
Sbjct: 147 TAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPW 206
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
W + AW AW + AW AW + AW
Sbjct: 207 TVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPAW 266
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
AW + AW AW + AW AW
Sbjct: 267 TAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAW 309
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 47/185 (25%), Gaps = 1/185 (0%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW + AW AW + AW
Sbjct: 87 TAWKAPPPTWTAWKATPKPWTAWKAPPPVWTAWKATPKPRTAWKAPPPTWTAWKAAPKPW 146
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + AW AW + AW
Sbjct: 147 TAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPW 206
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKDIVSRKIYQCV 259
W + AW AW + AW AW + K + K
Sbjct: 207 TVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPAWTAWKA-TPKPWTAWKAPPPA 265
Query: 260 KIAFK 264
A+K
Sbjct: 266 WTAWK 270
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 41/165 (24%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW + AW AW + AW
Sbjct: 117 TAWKATPKPRTAWKAPPPTWTAWKAAPKPWTAWKATPKPWTAWKAPPPAWTAWKATPKPW 176
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + W AW + AW
Sbjct: 177 TAWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPW 236
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
AW + AW AW + AW AW +
Sbjct: 237 TAWKAPPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKA 281
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 42/171 (24%)
Query: 74 AEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWD 133
A AW AW AW + AW AW + AW
Sbjct: 131 APPPTWTAWKAAPKPWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWK 190
Query: 134 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWD 193
AW + W AW + AW AW + AW
Sbjct: 191 ATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPAWTAWK 250
Query: 194 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
AW + AW AW + AW AW +
Sbjct: 251 ATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKA 301
>sp|A1X158|FP1V1_PERVI Foot protein 1 variant 1 OS=Perna viridis GN=fp-1 PE=1 SV=1
Length = 561
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 47/185 (25%), Gaps = 1/185 (0%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW W +T AW AW + AW
Sbjct: 227 TAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPTW 286
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + AW AW + AW
Sbjct: 287 TAWKATPKPWTAWKAPPPAWSAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPW 346
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKDIVSRKIYQCV 259
AW AW AW + AW AW + K + K
Sbjct: 347 TAWKVPPPAWTAWKAHPPAWTAWKATPKPWTAWKAPPPAWTAWKA-TPKPWTAWKAPPPA 405
Query: 260 KIAFK 264
A+K
Sbjct: 406 WTAWK 410
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 39/155 (25%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T AW AW + AW
Sbjct: 267 TAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTAWKATPKPW 326
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW AW AW + AW
Sbjct: 327 TAWKATPKPWTAWKATPKPWTAWKVPPPAWTAWKAHPPAWTAWKATPKPWTAWKAPPPAW 386
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG 234
AW + AW AW + AW
Sbjct: 387 TAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKA 421
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 57/241 (23%), Gaps = 10/241 (4%)
Query: 18 FNVH-GMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEV------KNV 70
F V G A V H + A +V H A H A
Sbjct: 11 FAVLIGSASAVYHPPSWTAWIAPKPWTAWKV---HPPAWTAWKAHPPAWTAWKATPKPWT 67
Query: 71 HGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKEC 130
A AW AW AW +T AW AW +
Sbjct: 68 AWKAPPPAWTAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPAWTAWKATLKPWT 127
Query: 131 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKEC 190
AW AW + AW AW + AW W +
Sbjct: 128 AWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWT 187
Query: 191 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKDI 250
AW AW + AW W + AW AW +
Sbjct: 188 AWKATPKPWTAWKAPPPAWSAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPWT 247
Query: 251 V 251
V
Sbjct: 248 V 248
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 43/172 (25%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW + AW AW + AW
Sbjct: 257 TAWKAPPPAWTAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPAWSAWKATPKPW 316
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + AW AW + AW
Sbjct: 317 TAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKVPPPAWTAWKAHPPAWTAWKATPKPW 376
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKDIV 251
AW + AW AW + AW AW + V
Sbjct: 377 TAWKAPPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKATPKPWTV 428
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 40/163 (24%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T W AW + AW
Sbjct: 187 TAWKATPKPWTAWKAPPPAWSAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPW 246
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
W + AW AW + AW AW + AW
Sbjct: 247 TVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPAW 306
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
AW + AW AW + AW AW
Sbjct: 307 SAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAW 349
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 46/185 (24%), Gaps = 1/185 (0%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW W AW +T AW W + AW
Sbjct: 207 SAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAW 266
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + AW AW + AW
Sbjct: 267 TAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTAWKATPKPW 326
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKDIVSRKIYQCV 259
AW + AW AW AW AW + K + K
Sbjct: 327 TAWKATPKPWTAWKATPKPWTAWKVPPPAWTAWKAHPPAWTAWKA-TPKPWTAWKAPPPA 385
Query: 260 KIAFK 264
A+K
Sbjct: 386 WTAWK 390
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 42/171 (24%), Gaps = 2/171 (1%)
Query: 74 AEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWD 133
A AW AW AW +T AW AW + AW
Sbjct: 281 APPPTWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTAWKATPKPWTAWKATPKPWTAWK 340
Query: 134 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWD 193
AW AW AW + AW AW + AW
Sbjct: 341 ATPKPWTAWKVPPPAWTAWKAHPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPWTAWK 400
Query: 194 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
AW + AW W + AW R W +
Sbjct: 401 APPPAWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAW--RATPPPTWTA 449
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 40/168 (23%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T AW W + AW
Sbjct: 137 TAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKATPKPW 196
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW W + AW AW + W
Sbjct: 197 TAWKAPPPAWSAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPW 256
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 247
AW + AW AW + AW AW +
Sbjct: 257 TAWKAPPPAWTAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPP 304
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 39/163 (23%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T AW AW + W
Sbjct: 127 TAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPW 186
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + W AW + AW
Sbjct: 187 TAWKATPKPWTAWKAPPPAWSAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPW 246
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
W + AW AW + AW AW
Sbjct: 247 TVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPTWTAW 289
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 47/194 (24%), Gaps = 9/194 (4%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW W AW +T AW AW + W
Sbjct: 167 TAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTVWKATPKPW 226
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW W + AW AW + AW
Sbjct: 227 TAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPWTAWKAPPPTW 286
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG---------GKDI 250
AW + AW AW + AW AW + K
Sbjct: 287 TAWKATPKPWTAWKAPPPAWSAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPW 346
Query: 251 VSRKIYQCVKIAFK 264
+ K+ A+K
Sbjct: 347 TAWKVPPPAWTAWK 360
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 39/163 (23%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T W AW + AW
Sbjct: 147 TAWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKAPPPAW 206
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + W AW + AW W + AW
Sbjct: 207 SAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAW 266
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
AW + AW AW + AW AW
Sbjct: 267 TAWKATPKPWTAWKAPPPTWTAWKATPKPWTAWKAPPPAWSAW 309
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 39/163 (23%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW W +T AW AW + AW
Sbjct: 157 TAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKAPPPAWSAWKATPKPW 216
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
W + AW AW + W AW + AW
Sbjct: 217 TVWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKATPKPW 276
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
AW + AW AW + AW AW
Sbjct: 277 TAWKAPPPTWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTAW 319
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 40/163 (24%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW + AW AW + AW
Sbjct: 277 TAWKAPPPTWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTAWKATPKPWTAWKATPKPW 336
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + AW AW + AW AW + AW
Sbjct: 337 TAWKATPKPWTAWKVPPPAWTAWKAHPPAWTAWKATPKPWTAWKAPPPAWTAWKATPKPW 396
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
AW + AW AW + W AW
Sbjct: 397 TAWKAPPPAWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAW 439
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 46/185 (24%), Gaps = 1/185 (0%)
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
AW AW AW +T AW AW + AW
Sbjct: 107 TAWKAPPPAWTAWKATLKPWTAWKATPKPWTAWKATPKPWTAWKATPKPWTAWKATPKPW 166
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
AW + W AW + AW AW + W
Sbjct: 167 TAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKAPPPAWSAWKATPKPWTVWKATPKPW 226
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKDIVSRKIYQCV 259
AW + AW W + AW AW + K + K
Sbjct: 227 TAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPPAWTAWKA-TPKPWTAWKAPPPT 285
Query: 260 KIAFK 264
A+K
Sbjct: 286 WTAWK 290
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 41/174 (23%)
Query: 74 AEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWD 133
A AW AW AW +T AW AW + AW
Sbjct: 91 APPPTWTAWKATPKPWTAWKAPPPAWTAWKATLKPWTAWKATPKPWTAWKATPKPWTAWK 150
Query: 134 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWD 193
AW + AW W + AW AW + AW
Sbjct: 151 ATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKATPKPWTAWKAPPPAWSAWK 210
Query: 194 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 247
W + AW AW + W AW +
Sbjct: 211 ATPKPWTVWKATPKPWTAWKATPKPWTAWKATPKPWTVWKATPKPWTAWKAPPP 264
>sp|Q6PCR7|EIF3A_DANRE Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio
GN=eif3a PE=2 SV=1
Length = 1267
Score = 41.6 bits (96), Expect = 0.006, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 69/184 (37%), Gaps = 13/184 (7%)
Query: 76 EVKKCAWDGRGGKECAW-----------DGRGGKECAWDSTGGKECAWDGRGGKECAWDS 124
E ++ W RG E W +GR G+E G + A D
Sbjct: 889 EREESGWRKRGEGESEWRRPVPDRDWRQEGREGREEPDREDRDLPFRRGGESARRGASDE 948
Query: 125 RGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 184
+G + D RG + D R + D RG + D RG + D RG + D
Sbjct: 949 KGLRRGCDDDRGPRRGGDDERPPRRGFDDDRGTRRGFDDDRGQRR-GDDDRGPRRGMDDD 1007
Query: 185 RGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS 244
RG + D RG + D RG + D RG + + RG + A D G + D
Sbjct: 1008 RGPRRPIDDDRGPRRSD-DDRGPRRGFDDDRGPRRGMDEPRGPRRGADDDWGPRRGGDDE 1066
Query: 245 RGGK 248
RGG+
Sbjct: 1067 RGGR 1070
Score = 31.2 bits (69), Expect = 7.9, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
D RG + D RG + D G + D RG + D RG + D RG +
Sbjct: 977 DDRGTRRGFDDDRGQRR-GDDDRGPRRGMDDDRGPRRPIDDDRGPRRSD-DDRGPRRGFD 1034
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDS---RGGKECAWD--GRGG 197
D RG + + RG + A D G + D RGG+ DS RG W GR G
Sbjct: 1035 DDRGPRRGMDEPRGPRRGADDDWGPRRGGDDERGGRRGMDDSGPRRGEDSRPWKPLGRPG 1094
Query: 198 KECAWDSRGGKECAW 212
+ +E +W
Sbjct: 1095 AGGWREREKAREESW 1109
>sp|Q6BZG0|SPT5_DEBHA Transcription elongation factor SPT5 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPT5 PE=3 SV=2
Length = 967
Score = 41.6 bits (96), Expect = 0.006, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 101 AWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKEC 160
A S GG AW G GG + +W GGK A++ G W G AW G
Sbjct: 873 ATPSVGGGATAW-GSGGAQSSWG--GGKTPAYNS--GNASTWGGNAGGASAWGNNNGNAS 927
Query: 161 AW--DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGK 208
W +S+ G W GG +S G + +W G AW GGK
Sbjct: 928 TWGSNSKNGGSSTW---GGNSTWGNSNKGGKSSW----GNGSAW---GGK 967
Score = 40.4 bits (93), Expect = 0.012, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 121 AWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKEC 180
A S GG AW G GG + +W GGK A++ G W G AW G
Sbjct: 873 ATPSVGGGATAW-GSGGAQSSWG--GGKTPAYNS--GNASTWGGNAGGASAWGNNNGNAS 927
Query: 181 AW--DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGK 228
W +S+ G W GG +S G + +W G AW GGK
Sbjct: 928 TWGSNSKNGGSSTW---GGNSTWGNSNKGGKSSW----GNGSAW---GGK 967
Score = 40.4 bits (93), Expect = 0.012, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 141 AWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKEC 200
A S GG AW G GG + +W GGK A++ G W G AW G
Sbjct: 873 ATPSVGGGATAW-GSGGAQSSWG--GGKTPAYNS--GNASTWGGNAGGASAWGNNNGNAS 927
Query: 201 AW--DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGK 248
W +S+ G W GG +S G + +W G AW GGK
Sbjct: 928 TWGSNSKNGGSSTW---GGNSTWGNSNKGGKSSW----GNGSAW---GGK 967
Score = 40.0 bits (92), Expect = 0.017, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 17/105 (16%)
Query: 86 GGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW--D 143
GG AW G GG + +W GGK A++ G W G AW G W +
Sbjct: 878 GGGATAW-GSGGAQSSWG--GGKTPAYNS--GNASTWGGNAGGASAWGNNNGNASTWGSN 932
Query: 144 SRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGK 188
S+ G W GG +S G + +W G AW GGK
Sbjct: 933 SKNGGSSTW---GGNSTWGNSNKGGKSSW----GNGSAW---GGK 967
Score = 35.0 bits (79), Expect = 0.53, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 19/96 (19%)
Query: 81 AWDGRGGKECAWDG------RGGKECAWDSTGGKECAWDGRGGKECAW--DSRGGKECAW 132
AW G GG + +W G G W G AW G W +S+ G W
Sbjct: 883 AW-GSGGAQSSWGGGKTPAYNSGNASTWGGNAGGASAWGNNNGNASTWGSNSKNGGSSTW 941
Query: 133 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGK 168
GG +S G + +W G AW GGK
Sbjct: 942 ---GGNSTWGNSNKGGKSSW----GNGSAW---GGK 967
>sp|A4II09|EIF3A_XENTR Eukaryotic translation initiation factor 3 subunit A OS=Xenopus
tropicalis GN=eif3a PE=2 SV=1
Length = 1391
Score = 41.2 bits (95), Expect = 0.008, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 64/164 (39%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
+ RG + D R + D G + D RG + + RG + D RG +
Sbjct: 1003 EDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFD 1062
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 202
+ R + D RG + D RG + + RG + D RG + D RG +
Sbjct: 1063 EDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFE 1122
Query: 203 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + D RG + D RG + + RG + D RG
Sbjct: 1123 DDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRG 1166
Score = 39.7 bits (91), Expect = 0.022, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 64/164 (39%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
D RG + D RG + + G + D RG + + R + D RG +
Sbjct: 1023 DDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFD 1082
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 202
D RG + + RG + D RG + D RG + D RG + D RG +
Sbjct: 1083 DDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFE 1142
Query: 203 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + + RG + D RG + + R + D RG
Sbjct: 1143 DDRGPRRGFDEDRGPRRGFEDDRGPRRGFDEDRTPRRGFDDDRG 1186
Score = 39.7 bits (91), Expect = 0.026, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 3/175 (1%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
D RG + + RG + D G + + R + D RG + D RG +
Sbjct: 1033 DDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFD 1092
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 202
+ RG + D RG + D RG + D RG + D RG + D RG +
Sbjct: 1093 EDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFD 1152
Query: 203 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG---GKDIVSRK 254
+ RG + D RG + + R + D RG + + RG G D V R+
Sbjct: 1153 EDRGPRRGFEDDRGPRRGFDEDRTPRRGFDDDRGPRRGLDEDRGSWRGGDDVPRR 1207
Score = 38.5 bits (88), Expect = 0.046, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 63/164 (38%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
D G + + RG + D + D RG + D RG + + RG +
Sbjct: 993 DDAGPRRGFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGID 1052
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 202
D RG + + R + D RG + D RG + + RG + D RG +
Sbjct: 1053 DDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFE 1112
Query: 203 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + D RG + D RG + D RG + + RG
Sbjct: 1113 DDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRG 1156
>sp|Q6ZQX7|CQ097_HUMAN Uncharacterized protein C17orf97 OS=Homo sapiens GN=C17orf97 PE=2
SV=2
Length = 453
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 48/137 (35%), Gaps = 2/137 (1%)
Query: 2 AEEVKNVHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVH 61
E +K H E +K F H E +K H E +K +H E +K +H E +K H
Sbjct: 229 PEALKGFHPDPEALKGF--HPDPEALKGFHPDPEALKGIHPDPEALKGIHPDPEALKGFH 286
Query: 62 GMAEEVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECA 121
E +K H E +K D K D K D K D + K
Sbjct: 287 PDPEALKGFHPDPEALKGFHTDPEALKGFHIDPEALKGFHPDPKALKGFHPDPKALKGFH 346
Query: 122 WDSRGGKECAWDGRGGK 138
D K D + K
Sbjct: 347 TDPEALKGFHPDPKALK 363
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 53/157 (33%), Gaps = 2/157 (1%)
Query: 2 AEEVKNVHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVH 61
E +K H + +K F H E +K H E +K H E +K H E +K +H
Sbjct: 209 PEALKGFHPDPDALKGF--HPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIH 266
Query: 62 GMAEEVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECA 121
E +K +H E +K D K D K D K D K
Sbjct: 267 PDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPEALKGFH 326
Query: 122 WDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGK 158
D + K D + K D K D + K
Sbjct: 327 PDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALK 363
>sp|Q6CC84|SPT5_YARLI Transcription elongation factor SPT5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=SPT5 PE=3 SV=1
Length = 980
Score = 40.4 bits (93), Expect = 0.014, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 111 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKEC 170
+W G GGK +W + GGK +W G K +W G K +W G + A ++ G +
Sbjct: 779 SWGG-GGKTPSWGA-GGKTPSW---GSKTPSWG--GAKTSSW---GSRTPAANAGGAQTP 828
Query: 171 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 207
AW G K +W + + AW G K AW + G
Sbjct: 829 AWGAMGNKTPSWGASESRTPAWG--GAKTPAWGAAGA 863
Score = 40.4 bits (93), Expect = 0.014, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 131 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKEC 190
+W G GGK +W + GGK +W G K +W G K +W G + A ++ G +
Sbjct: 779 SWGG-GGKTPSWGA-GGKTPSW---GSKTPSWG--GAKTSSW---GSRTPAANAGGAQTP 828
Query: 191 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 227
AW G K +W + + AW G K AW + G
Sbjct: 829 AWGAMGNKTPSWGASESRTPAWG--GAKTPAWGAAGA 863
Score = 40.4 bits (93), Expect = 0.014, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 151 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKEC 210
+W G GGK +W + GGK +W G K +W G K +W G + A ++ G +
Sbjct: 779 SWGG-GGKTPSWGA-GGKTPSW---GSKTPSWG--GAKTSSW---GSRTPAANAGGAQTP 828
Query: 211 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 247
AW G K +W + + AW G K AW + G
Sbjct: 829 AWGAMGNKTPSWGASESRTPAWG--GAKTPAWGAAGA 863
Score = 40.0 bits (92), Expect = 0.017, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 106 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 165
GGK +W G GGK +W G K +W G K +W SR A + G + AW +
Sbjct: 783 GGKTPSW-GAGGKTPSW---GSKTPSWGG--AKTSSWGSR---TPAANAGGAQTPAWGAM 833
Query: 166 GGKECAWDGRGGKECAWDSRGGKECAWDGRGG 197
G K +W + AW G K AW G
Sbjct: 834 GNKTPSWGASESRTPAWG--GAKTPAWGAAGA 863
Score = 40.0 bits (92), Expect = 0.017, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 126 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 185
GGK +W G GGK +W G K +W G K +W SR A + G + AW +
Sbjct: 783 GGKTPSW-GAGGKTPSW---GSKTPSWGG--AKTSSWGSR---TPAANAGGAQTPAWGAM 833
Query: 186 GGKECAWDGRGGKECAWDSRGGKECAWDGRGG 217
G K +W + AW G K AW G
Sbjct: 834 GNKTPSWGASESRTPAWG--GAKTPAWGAAGA 863
Score = 40.0 bits (92), Expect = 0.017, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 146 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 205
GGK +W G GGK +W G K +W G K +W SR A + G + AW +
Sbjct: 783 GGKTPSW-GAGGKTPSW---GSKTPSWGG--AKTSSWGSR---TPAANAGGAQTPAWGAM 833
Query: 206 GGKECAWDGRGGKECAWDSRGGKECAWDGRGG 237
G K +W + AW G K AW G
Sbjct: 834 GNKTPSWGASESRTPAWG--GAKTPAWGAAGA 863
Score = 31.6 bits (70), Expect = 6.8, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Query: 78 KKCAWDGRGGKECAWDGR-----GGKECAWDST-------GGKECAWDGRGGKECAWDSR 125
K +W G GGK +W + G K +W S G + AW G K +W +
Sbjct: 785 KTPSW-GAGGKTPSWGSKTPSWGGAKTSSWGSRTPAANAGGAQTPAWGAMGNKTPSWGAS 843
Query: 126 GGKECAWDGRGGKECAWDSRGG 147
+ AW G K AW + G
Sbjct: 844 ESRTPAWG--GAKTPAWGAAGA 863
>sp|Q14152|EIF3A_HUMAN Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens
GN=EIF3A PE=1 SV=1
Length = 1382
Score = 39.7 bits (91), Expect = 0.023, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 85 RGGKECAWDGRGGKE--CAWDSTGG----KECAWDGRGGKECAWDSRGGKECAWDGRGGK 138
RG +E + RG + +W +T + A + RG A D R + + RG
Sbjct: 970 RGPEEDRFSRRGADDDRPSWRNTDDDRPPRRIADEDRGNWRHADDDRPPRRGLDEDRGSW 1029
Query: 139 ECAWDSRGGKECAWDGRGGKEC-AWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGG 197
A + RG + D RG + A D R A D RG + D RG + D RG
Sbjct: 1030 RTADEDRGPRRGMDDDRGPRRGGADDERSSWRNADDDRGPRRGLDDDRGPRRGMDDDRGP 1089
Query: 198 KECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
+ D RG + D RG + D RG A D R + A D RG
Sbjct: 1090 RRGMDDDRGPRRGMDDDRGPRRGLDDDRGPWRNADDDRIPRRGAEDDRG 1138
Score = 38.9 bits (89), Expect = 0.042, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 57/145 (39%), Gaps = 1/145 (0%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKEC-A 141
D R + A + RG A D + + RG A + RG + D RG + A
Sbjct: 994 DDRPPRRIADEDRGNWRHADDDRPPRRGLDEDRGSWRTADEDRGPRRGMDDDRGPRRGGA 1053
Query: 142 WDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECA 201
D R A D RG + D RG + D RG + D RG + D RG +
Sbjct: 1054 DDERSSWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGL 1113
Query: 202 WDSRGGKECAWDGRGGKECAWDSRG 226
D RG A D R + A D RG
Sbjct: 1114 DDDRGPWRNADDDRIPRRGAEDDRG 1138
Score = 37.7 bits (86), Expect = 0.084, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
Query: 93 DGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 152
D RG + + + A D R D R + A + RG A D R +
Sbjct: 964 DDRGPRRGPEEDRFSRRGADDDRPSWRNTDDDRPPRRIADEDRGNWRHADDDRPPRRGLD 1023
Query: 153 DGRGGKECAWDSRGGKECAWDGRGGKE-CAWDSRGGKECAWDGRGGKECAWDSRGGKECA 211
+ RG A + RG + D RG + A D R A D RG + D RG +
Sbjct: 1024 EDRGSWRTADEDRGPRRGMDDDRGPRRGGADDERSSWRNADDDRGPRRGLDDDRGPRRGM 1083
Query: 212 WDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + D RG + D RG + D RG
Sbjct: 1084 DDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRG 1118
>sp|Q2UGU3|SPT5_ASPOR Transcription elongation factor spt5 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=spt5 PE=3 SV=1
Length = 1026
Score = 37.4 bits (85), Expect = 0.12, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 14/117 (11%)
Query: 72 GMAEEVKKCAWDGRGGKEC-AWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKEC 130
G A + AW G GG AW G + + G A+ G G + AW++ G
Sbjct: 827 GGASSARTPAWAGMGGSRTPAWKNDGSRTS--NPYDGSRTAYGGFGSRTPAWNA--GART 882
Query: 131 AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKEC-AWDGRGGKECAWDSRG 186
+ G G + +D+ G + AW++ G AW G + DSRG
Sbjct: 883 PYGGSGSGQSDFDAFAA--------GSRTPAWNANSGSRTPAWSGATASNGSKDSRG 931
Score = 37.4 bits (85), Expect = 0.12, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 24/153 (15%)
Query: 84 GRGGKEC-------AWDGRGGKECAWDSTGGKECAWDG-RGGKECAWDSRGGKEC-AWDG 134
GRGG W G A DS+ + AW G + AW GG AW
Sbjct: 793 GRGGPRVPSAAPPSGWQGGRTPMAAADSS--RTPAWGGASSARTPAWAGMGGSRTPAWKN 850
Query: 135 RGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG 194
G + + G A+ G G + AW++ G + G G + +D+
Sbjct: 851 DGSRTS--NPYDGSRTAYGGFGSRTPAWNA--GARTPYGGSGSGQSDFDAFAA------- 899
Query: 195 RGGKECAWDSRGGKEC-AWDGRGGKECAWDSRG 226
G + AW++ G AW G + DSRG
Sbjct: 900 -GSRTPAWNANSGSRTPAWSGATASNGSKDSRG 931
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 114 GRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG-RGGKECAWDSRGGKEC-A 171
GRGG W G A DS + AW G + AW GG A
Sbjct: 793 GRGGPRVP---SAAPPSGWQGGRTPMAAADS--SRTPAWGGASSARTPAWAGMGGSRTPA 847
Query: 172 WDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWD--SRGGKE 229
W G + + G A+ G G + AW++ G + G G + +D + G +
Sbjct: 848 WKNDGSRTS--NPYDGSRTAYGGFGSRTPAWNA--GARTPYGGSGSGQSDFDAFAAGSRT 903
Query: 230 CAWDGRGGKEC-AWD----SRGGKD 249
AW+ G AW S G KD
Sbjct: 904 PAWNANSGSRTPAWSGATASNGSKD 928
>sp|P78332|RBM6_HUMAN RNA-binding protein 6 OS=Homo sapiens GN=RBM6 PE=1 SV=5
Length = 1123
Score = 35.8 bits (81), Expect = 0.37, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 2/165 (1%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
D RGG+ D RGG + D D RG + D R + D RGG +
Sbjct: 84 DYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSM 143
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWD--GRGGKECAWDSRGGKECAWDGRGGKEC 200
D RG + + R A D RG D GRG + + R G + GR +
Sbjct: 144 DYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDL 203
Query: 201 AWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 245
+ +R + R + + + G + + GRG D R
Sbjct: 204 DFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTTDLDFR 248
Score = 32.0 bits (71), Expect = 4.6, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 43/114 (37%)
Query: 133 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 192
D RGG+ D RGG + D + D RG + D R + D RGG +
Sbjct: 84 DYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSM 143
Query: 193 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + + R A D RG D RG D RG D RG
Sbjct: 144 DYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRG 197
Score = 31.2 bits (69), Expect = 7.8, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 53/154 (34%)
Query: 93 DGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 152
D RGG+ D GG + D + D RG + D R + D RGG +
Sbjct: 84 DYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSM 143
Query: 153 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 212
D RG + + R A D RG D RG D RG D RG
Sbjct: 144 DYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDL 203
Query: 213 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D R ++ D R D R D RG
Sbjct: 204 DFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRG 237
>sp|E2RYF6|MUC22_HUMAN Mucin-22 OS=Homo sapiens GN=MUC22 PE=1 SV=2
Length = 1773
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 24/88 (27%)
Query: 97 GKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRG 156
G E ST G E G E S G E G E S G E
Sbjct: 1162 GSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTM 1221
Query: 157 GKECAWDSRGGKECAWDGRGGKECAWDS 184
G E S G E G E S
Sbjct: 1222 GSETTTASTAGSETTTVSTAGSETTTAS 1249
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 23/88 (26%)
Query: 117 GKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRG 176
G E S G E G E S G E G E S G E
Sbjct: 1162 GSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTM 1221
Query: 177 GKECAWDSRGGKECAWDGRGGKECAWDS 204
G E S G E G E S
Sbjct: 1222 GSETTTASTAGSETTTVSTAGSETTTAS 1249
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 23/88 (26%)
Query: 137 GKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRG 196
G E S G E G E S G E G E S G E
Sbjct: 1162 GSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTM 1221
Query: 197 GKECAWDSRGGKECAWDGRGGKECAWDS 224
G E S G E G E S
Sbjct: 1222 GSETTTASTAGSETTTVSTAGSETTTAS 1249
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 23/86 (26%)
Query: 87 GKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 146
G E G E ST G E G E S G E G E +
Sbjct: 1162 GSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTM 1221
Query: 147 GKECAWDGRGGKECAWDSRGGKECAW 172
G E G E S G E
Sbjct: 1222 GSETTTASTAGSETTTVSTAGSETTT 1247
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 24/89 (26%)
Query: 167 GKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 226
G E G E S G E G E S G E G E +
Sbjct: 1162 GSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTM 1221
Query: 227 GKECAWDGRGGKECAWDSRGGKDIVSRKI 255
G E G E S G + + I
Sbjct: 1222 GSETTTASTAGSETTTVSTAGSETTTASI 1250
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 22/86 (25%)
Query: 147 GKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 206
G E G E S G E G E S G E G E +
Sbjct: 1162 GSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTM 1221
Query: 207 GKECAWDGRGGKECAWDSRGGKECAW 232
G E G E S G E
Sbjct: 1222 GSETTTASTAGSETTTVSTAGSETTT 1247
>sp|P0CR71|SPT5_CRYNB Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=SPT5 PE=3
SV=1
Length = 1152
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 84 GRGGKE-CAWDGRGGKECAWDSTGGKECAWD-GRGGKECAWDSRGGK 128
G GGK A + GGK AW ++GGK A+ GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 94 GRGGKE-CAWDSTGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 138
G GGK A +++GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 114 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 158
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 134 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 178
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 154 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 198
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 174 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 218
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 194 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 238
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
>sp|P0CR70|SPT5_CRYNJ Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT5 PE=3 SV=1
Length = 1152
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 84 GRGGKE-CAWDGRGGKECAWDSTGGKECAWD-GRGGKECAWDSRGGK 128
G GGK A + GGK AW ++GGK A+ GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 94 GRGGKE-CAWDSTGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 138
G GGK A +++GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 114 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 158
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 134 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 178
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 154 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 198
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 174 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 218
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 194 GRGGKE-CAWDSRGGKECAWDGRGGKECAWD-SRGGKECAWDGRGGK 238
G GGK A ++ GGK AW GGK A+ + GGK A+ +GGK
Sbjct: 851 GVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGK 897
>sp|A6NNT2|CP096_HUMAN Putative uncharacterized protein C16orf96 OS=Homo sapiens
GN=C16orf96 PE=5 SV=3
Length = 1141
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 32/75 (42%)
Query: 175 RGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG 234
R K+ A R K+ RGGK+ R K+ RGGK+ R K+
Sbjct: 472 RARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKD 531
Query: 235 RGGKECAWDSRGGKD 249
RGGK+ R GKD
Sbjct: 532 RGGKDGDPKDRVGKD 546
Score = 32.7 bits (73), Expect = 2.5, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 60 VHGMAEEVKNVHGMAEEVKKCAWDGRGGKECAWDG----RGGKECAWDSTGGKECAWDGR 115
V G +V ++ G+ E +K DG DG RGGK+ K+ R
Sbjct: 456 VKGEENDVPSLRGLRERARK---DGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDR 512
Query: 116 GGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECA 151
GGK+ R K+ RGGK+ R GK+ A
Sbjct: 513 GGKDVDPKDRAHKDDVPKDRGGKDGDPKDRVGKDGA 548
Score = 32.3 bits (72), Expect = 3.5, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 115 RGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG 174
R K+ A R K+ RGGK+ R K+ RGGK+ R K+
Sbjct: 472 RARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKD 531
Query: 175 RGGKECAWDSRGGKECA 191
RGGK+ R GK+ A
Sbjct: 532 RGGKDGDPKDRVGKDGA 548
Score = 32.3 bits (72), Expect = 3.5, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 135 RGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG 194
R K+ A R K+ RGGK+ R K+ RGGK+ R K+
Sbjct: 472 RARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKD 531
Query: 195 RGGKECAWDSRGGKECA 211
RGGK+ R GK+ A
Sbjct: 532 RGGKDGDPKDRVGKDGA 548
Score = 32.3 bits (72), Expect = 3.5, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 155 RGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDG 214
R K+ A R K+ RGGK+ R K+ RGGK+ R K+
Sbjct: 472 RARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKD 531
Query: 215 RGGKECAWDSRGGKECA 231
RGGK+ R GK+ A
Sbjct: 532 RGGKDGDPKDRVGKDGA 548
>sp|Q1JU68|EIF3A_RAT Eukaryotic translation initiation factor 3 subunit A OS=Rattus
norvegicus GN=Eif3a PE=2 SV=2
Length = 1354
Score = 33.1 bits (74), Expect = 2.2, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 50/135 (37%), Gaps = 1/135 (0%)
Query: 113 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 172
D R A D R + D RG D R + D R + D RG A
Sbjct: 984 DDRPSWRNADDDRPPRRIGDDDRGSWRHTDDDRPPRRGLDDDRPPRRGLDDERGSWRTAE 1043
Query: 173 DGRGGKECAWDSRGGKE-CAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECA 231
+ RG + D RG + A D R A D RG + D RG + D RG A
Sbjct: 1044 EDRGPRRGMDDDRGPRRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRGPWRNA 1103
Query: 232 WDGRGGKECAWDSRG 246
+ R + A D RG
Sbjct: 1104 AEDRISRRGADDDRG 1118
Score = 32.0 bits (71), Expect = 4.8, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 55/148 (37%), Gaps = 6/148 (4%)
Query: 113 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 172
D RG + + R + D R A D R + D RG D R +
Sbjct: 964 DDRGPRRGPDEDRFSRRGTDDDRPSWRNADDDRPPRRIGDDDRGSWRHTDDDRPPRRGLD 1023
Query: 173 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKE-CAWDGRGGKECAWDSRGGKECA 231
D R + D RG A + RG + D RG + A D R A D RG +
Sbjct: 1024 DDRPPRRGLDDERGSWRTAEEDRGPRRGMDDDRGPRRGGADDERSSWRNADDDRGPRRGM 1083
Query: 232 WDGRGGKECAWDSRG-----GKDIVSRK 254
D RG + D RG +D +SR+
Sbjct: 1084 DDDRGPRRGLDDDRGPWRNAAEDRISRR 1111
>sp|P23116|EIF3A_MOUSE Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus
GN=Eif3a PE=1 SV=5
Length = 1344
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 56/154 (36%), Gaps = 9/154 (5%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
D RG + + R + D A D R + D RG D R +
Sbjct: 964 DDRGPRRGPDEDRFSRRGTDDDRPSWRNADDDRPPRRIGDDDRGSWRHTDDDRPPRRGLD 1023
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 202
D RG A + RG + D RG + RGG + D R A D RG +
Sbjct: 1024 DERGSWRTADEDRGPRRGMDDDRGPR------RGGAD---DERSSWRNADDDRGPRRGMD 1074
Query: 203 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRG 236
D RG + D RG A + R + A D RG
Sbjct: 1075 DDRGPRRGLDDDRGPWRNAAEDRISRRGADDDRG 1108
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 1/125 (0%)
Query: 123 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 182
D R A D R + D RG D R + D RG A + RG +
Sbjct: 984 DDRPSWRNADDDRPPRRIGDDDRGSWRHTDDDRPPRRGLDDERGSWRTADEDRGPRRGMD 1043
Query: 183 DSRGGKE-CAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECA 241
D RG + A D R A D RG + D RG + D RG A + R + A
Sbjct: 1044 DDRGPRRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRGPWRNAAEDRISRRGA 1103
Query: 242 WDSRG 246
D RG
Sbjct: 1104 DDDRG 1108
Score = 31.2 bits (69), Expect = 7.9, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 55/147 (37%), Gaps = 14/147 (9%)
Query: 113 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 172
D RG + + R + D R A D R + D RG D R +
Sbjct: 964 DDRGPRRGPDEDRFSRRGTDDDRPSWRNADDDRPPRRIGDDDRGSWRHTDDDRPPRRGLD 1023
Query: 173 DGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAW 232
D RG A + RG + D RG + RGG + D R A D RG +
Sbjct: 1024 DERGSWRTADEDRGPRRGMDDDRGPR------RGGAD---DERSSWRNADDDRGPRRGMD 1074
Query: 233 DGRGGKECAWDSRG-----GKDIVSRK 254
D RG + D RG +D +SR+
Sbjct: 1075 DDRGPRRGLDDDRGPWRNAAEDRISRR 1101
>sp|A2VD00|EIF3A_XENLA Eukaryotic translation initiation factor 3 subunit A OS=Xenopus
laevis GN=eif3a PE=2 SV=1
Length = 1424
Score = 32.7 bits (73), Expect = 2.7, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 66/164 (40%)
Query: 83 DGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 142
+ RG + + RG + + G + + RG + + RG + + RG +
Sbjct: 1015 EDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFD 1074
Query: 143 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 202
+ RG + + RG + + RG + + RG + + RG + + RG +
Sbjct: 1075 EDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFD 1134
Query: 203 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + D RG + D RG + D RG + D RG
Sbjct: 1135 DDRGPRRGFDDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRG 1178
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 8/225 (3%)
Query: 22 GMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEVKNVHGMAEEVKKCA 81
G +E G ++ G+ E+ G+ E+ G+ E+ G+ E+
Sbjct: 982 GFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDED----- 1036
Query: 82 WDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECA 141
RG + + RG + + G + + RG + + RG + + RG +
Sbjct: 1037 ---RGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDF 1093
Query: 142 WDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECA 201
+ RG + + RG + + RG + + RG + D RG + D RG +
Sbjct: 1094 DEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGF 1153
Query: 202 WDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRG 246
D RG + D RG + D RG + + R + D RG
Sbjct: 1154 EDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRG 1198
>sp|Q80ZF8|BAI3_MOUSE Brain-specific angiogenesis inhibitor 3 OS=Mus musculus GN=Bai3
PE=1 SV=2
Length = 1522
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 22/167 (13%)
Query: 70 VHGMAEEVKK---CAWD-GRG----GKECAWDGRGGKECAWDSTGGKEC-----AWDGRG 116
VHG+ EE C++ GRG + C GG+ C T K C DG+
Sbjct: 344 VHGVWEEWSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQW 403
Query: 117 GKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRG 176
+ +W + ++C + GG EC +EC EC +G+
Sbjct: 404 QEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECY-----NPECTANGQW 458
Query: 177 GKECAWDSRGGKEC--AWDGRGGKECAWDSRGGKECAWDGRGGKECA 221
+ W S K C W+ R + C + G++C G + C+
Sbjct: 459 NQWGHW-SGCSKSCDGGWE-RRMRTCQGAAVTGQQCEGTGEEVRRCS 503
>sp|Q28298|RRBP1_CANFA Ribosome-binding protein 1 OS=Canis familiaris GN=RRBP1 PE=2 SV=1
Length = 1534
Score = 32.3 bits (72), Expect = 3.3, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 89/246 (36%), Gaps = 3/246 (1%)
Query: 4 EVKNVHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGM 63
+ K V G + KK G + K G + + K V G + K G + K V G
Sbjct: 458 QSKKVEGAPNQGKK--AEGSQNQGKKTEGASNQGKKVDGAQNQGKKAEGAPNQGKKVEGA 515
Query: 64 AEEVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWD 123
+ K G + KK GK+ GK+ GK+ GK+
Sbjct: 516 QNQGKKAEGTPNQGKKAEGAQNQGKKAEGAPNQGKKAEGAPNQGKKAEGAPNQGKKAEGA 575
Query: 124 SRGGKEC-AWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 182
GK+ A +G K ++G K +G K A ++G K +G K
Sbjct: 576 PNQGKKAEAAPNQGKKAEGAPNQGKKAEGAPNQGKKAEAAPNQGKKAEGAPNQGKKAEGA 635
Query: 183 DSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAW 242
++G K +G K ++G K +G K ++G K G+G K
Sbjct: 636 PNQGKKAEGAPNQGKKAEGAQNQGKKAEGAPNQGKKADLVANQGTKAEGVAGQGKKAEGA 695
Query: 243 DSRGGK 248
++G K
Sbjct: 696 PNQGKK 701
Score = 31.2 bits (69), Expect = 8.5, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 76/234 (32%), Gaps = 2/234 (0%)
Query: 6 KNVHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAE 65
K G + KK V + + K V G + K G + K G + + K V G
Sbjct: 440 KKAEGSPNQGKKVEV--VQNQSKKVEGAPNQGKKAEGSQNQGKKTEGASNQGKKVDGAQN 497
Query: 66 EVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSR 125
+ K G + KK GK+ GK+ GK+ GK+
Sbjct: 498 QGKKAEGAPNQGKKVEGAQNQGKKAEGTPNQGKKAEGAQNQGKKAEGAPNQGKKAEGAPN 557
Query: 126 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 185
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 558 QGKKAEGAPNQGKKAEGAPNQGKKAEAAPNQGKKAEGAPNQGKKAEGAPNQGKKAEAAPN 617
Query: 186 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 239
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 618 QGKKAEGAPNQGKKAEGAPNQGKKAEGAPNQGKKAEGAQNQGKKAEGAPNQGKK 671
>sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4
Length = 1410
Score = 32.0 bits (71), Expect = 4.4, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 69/221 (31%)
Query: 28 KHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEVKNVHGMAEEVKKCAWDGRGG 87
K V G + + G + K V G + K G + K G + KK G
Sbjct: 280 KKVEGAPTQGRKAEGAQNQAKKVEGAQNQGKKAEGAQNQGKKGEGAQNQGKKAEGAQNQG 339
Query: 88 KECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 147
K+ GK+ GK+ GK+ GK+ GK+ G
Sbjct: 340 KKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKSEGAQNQGKKVEGAQNQG 399
Query: 148 KECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGG 207
K+ GK+ GK+ GK+ GK+ GK+ G
Sbjct: 400 KKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQG 459
Query: 208 KECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGK 248
K+ GK+ GK+ GK+ GK
Sbjct: 460 KKAEGAQNQGKKVEGAQNQGKKAEGAQNQGKKAEGAQNQGK 500
Score = 32.0 bits (71), Expect = 4.6, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 76/243 (31%), Gaps = 2/243 (0%)
Query: 6 KNVHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAE 65
K G + KK G + K G + K V + K V G + + G
Sbjct: 240 KKAEGTPNQGKK--AEGTPNQGKKAEGAQNQGKKVDTTPNQGKKVEGAPTQGRKAEGAQN 297
Query: 66 EVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSR 125
+ K V G + KK GK+ GK+ GK+ GK+
Sbjct: 298 QAKKVEGAQNQGKKAEGAQNQGKKGEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQN 357
Query: 126 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 185
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 358 QGKKAEGAQNQGKKAEGAQNQGKKSEGAQNQGKKVEGAQNQGKKAEGAQNQGKKAEGAQN 417
Query: 186 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 245
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 418 QGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKVEGAQN 477
Query: 246 GGK 248
GK
Sbjct: 478 QGK 480
Score = 32.0 bits (71), Expect = 4.6, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 69/220 (31%)
Query: 20 VHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEVKNVHGMAEEVKK 79
V G + + G + K V G + K G + K G + K G + KK
Sbjct: 282 VEGAPTQGRKAEGAQNQAKKVEGAQNQGKKAEGAQNQGKKGEGAQNQGKKAEGAQNQGKK 341
Query: 80 CAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 139
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 342 AEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKSEGAQNQGKKVEGAQNQGKK 401
Query: 140 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 199
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 402 AEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKK 461
Query: 200 CAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKE 239
GK+ GK+ GK+ GK+
Sbjct: 462 AEGAQNQGKKVEGAQNQGKKAEGAQNQGKKAEGAQNQGKK 501
Score = 31.6 bits (70), Expect = 6.5, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 76/245 (31%), Gaps = 2/245 (0%)
Query: 6 KNVHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAE 65
K G + KK G + K G + K G + K V + K V G
Sbjct: 230 KKTEGTPNQGKK--AEGTPNQGKKAEGTPNQGKKAEGAQNQGKKVDTTPNQGKKVEGAPT 287
Query: 66 EVKNVHGMAEEVKKCAWDGRGGKECAWDGRGGKECAWDSTGGKECAWDGRGGKECAWDSR 125
+ + G + KK GK+ GK+ GK+ GK+
Sbjct: 288 QGRKAEGAQNQAKKVEGAQNQGKKAEGAQNQGKKGEGAQNQGKKAEGAQNQGKKAEGAQN 347
Query: 126 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 185
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 348 QGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKSEGAQNQGKKVEGAQNQGKKAEGAQN 407
Query: 186 GGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSRGGKECAWDGRGGKECAWDSR 245
GK+ GK+ GK+ GK+ GK+ GK+
Sbjct: 408 QGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQN 467
Query: 246 GGKDI 250
GK +
Sbjct: 468 QGKKV 472
>sp|Q8CCP0|NEMF_MOUSE Nuclear export mediator factor Nemf OS=Mus musculus GN=Nemf PE=1
SV=2
Length = 1064
Score = 32.0 bits (71), Expect = 5.2, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 23 MAEEVKHVHG---MAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEVKNVHGMAEEVKK 79
MAEE++ + G EE + +HGM +V+ + + +E VH +E+ + G A+ V K
Sbjct: 689 MAEEMEQLEGGDSSEEETEELHGMPGDVELMTQVDQEDIAVHSGRDELSSEDGEAKAVTK 748
>sp|P32811|PHSH_SOLTU Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1
SV=1
Length = 838
Score = 30.8 bits (68), Expect = 9.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 8 VHGMAEEIKKFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEEV 67
+H E K N +A+ + HV G++ + ++ + +VK +H ++ N+ G+
Sbjct: 531 LHAEWESAKMANKQRLAQYILHVTGVSIDPNSLFDI--QVKRIHEYKRQLLNILGVIYRY 588
Query: 68 KNVHGMAEEVKK 79
K + GM+ E +K
Sbjct: 589 KKLKGMSPEERK 600
>sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2
SV=1
Length = 947
Score = 30.8 bits (68), Expect = 9.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 84 GRGGKECAWDGRGGKECAWDSTGGKECAWDG-RGGKECAWDSRGGKECAWDGRGGKECAW 142
G G +E + DGR ++ + D ++ + DG G +E + D G +E + DG G +E +
Sbjct: 849 GEGRRESSRDGR--RDSSRDGESRRDGSRDGGEGRRESSRDGEGRRESSRDGDGRRESSG 906
Query: 143 DSR 145
D R
Sbjct: 907 DGR 909
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.477
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,266,732
Number of Sequences: 539616
Number of extensions: 7108032
Number of successful extensions: 11943
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 9901
Number of HSP's gapped (non-prelim): 892
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)