RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10920
         (271 letters)



>d1m47a_ a.26.1.2 (A:) Interleukin-2 (IL-2) {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 128

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 15/74 (20%)

Query: 17  KFNVHGMAEEVKHVHGMAEEVKNVHGMAEEVKNVHGIAEEVKNVHGMAEE-VKNVHGMAE 75
           KF +   A E+KH+  + EE+K +    EEV N+     + KN H    + + N++ +  
Sbjct: 38  KFYMPKKATELKHLQCLEEELKPL----EEVLNL----AQSKNFHLRPRDLISNINVIVL 89

Query: 76  EVK------KCAWD 83
           E+K       C + 
Sbjct: 90  ELKGSETTFMCEYA 103


>d1e44b_ b.101.1.1 (B:) Ribonuclease domain of colicin E3
           {Escherichia coli [TaxId: 562]}
          Length = 96

 Score = 26.0 bits (57), Expect = 1.8
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 65  EEVKNVHGMAEEVKKCAWDGRGGKECAW-DGRGGKECAWDSTGGKECAWDGRGGKE-CAW 122
           E +K +  +   + K      GGK   W   +G K   WDS  G+   +    G+   ++
Sbjct: 16  ENIKGLGDLKPGIPKTPKQNGGGKRKRWTGDKGRKIYEWDSQHGELEGYRASDGQHLGSF 75

Query: 123 DSRGGKE 129
           D + G +
Sbjct: 76  DPKTGNQ 82


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.136    0.477 

Gapped
Lambda     K      H
   0.267   0.0373    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,224,464
Number of extensions: 64141
Number of successful extensions: 177
Number of sequences better than 10.0: 1
Number of HSP's gapped: 169
Number of HSP's successfully gapped: 12
Length of query: 271
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 187
Effective length of database: 1,254,276
Effective search space: 234549612
Effective search space used: 234549612
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.8 bits)