RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10922
         (362 letters)



>d1hlba_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina
           arenicola, also known as Molpadia arenicola [TaxId:
           7698]}
          Length = 157

 Score = 27.3 bits (60), Expect = 2.0
 Identities = 8/58 (13%), Positives = 15/58 (25%), Gaps = 1/58 (1%)

Query: 197 EVPAPLNFHQISDIR-ILQVMSSMLTGIAGTFFSGTFELSPDIRHTFGTFGSQFGARH 253
           +    L   Q   +R     +    T      F   F   P  ++ F        ++ 
Sbjct: 7   QAQGDLTLAQKKIVRKTWHQLMRNKTSFVTDVFIRIFAYDPSAQNKFPQMAGMSASQL 64


>d1sctb_ a.1.1.2 (B:) Hemoglobin I {Ark clam (Scapharca
           inaequivalvis) [TaxId: 6561]}
          Length = 150

 Score = 26.6 bits (58), Expect = 2.8
 Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 8/96 (8%)

Query: 202 LNFHQISDIR-ILQVMSSMLTGIAGTFFSGTFELSPDIRHTFGTF-------GSQFGARH 253
            N  Q   +R    V+S  + G      +  F+ SP  +  F           +     H
Sbjct: 11  SNADQKDLLRMSWGVLSVDMEGTGLMLMANLFKTSPSAKGKFARLGDVSAGKDNSKLRGH 70

Query: 254 TYTVISRDAAFYVGIRQTNNIQPTHRSVRMIYANLC 289
           + T++     F   +     ++       + + N  
Sbjct: 71  SITLMYALQNFVDALDDVERLKCVVEKFAVNHINRQ 106


>d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina)
           [TaxId: 6502]}
          Length = 146

 Score = 25.8 bits (56), Expect = 5.8
 Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 1/53 (1%)

Query: 202 LNFHQISDIR-ILQVMSSMLTGIAGTFFSGTFELSPDIRHTFGTFGSQFGARH 253
           L+  +          + +        F    FE  PD  + F  F  +  A  
Sbjct: 2   LSAAEADLAGKSWAPVFANKNANGLDFLVALFEKFPDSANFFADFKGKSVADI 54


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0635    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,316,356
Number of extensions: 58469
Number of successful extensions: 99
Number of sequences better than 10.0: 1
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 4
Length of query: 362
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 276
Effective length of database: 1,226,816
Effective search space: 338601216
Effective search space used: 338601216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.4 bits)