BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10923
(520 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1ECV4|TTLL3_DANRE Tubulin monoglycylase TTLL3 OS=Danio rerio GN=ttll3 PE=2 SV=1
Length = 771
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 72 GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTC----PRCVVQKYIEKPLLIH 127
G+ + ++KP A G GI +L+D+ +G + C + VVQKYIE+PLL+H
Sbjct: 331 GICNIWIIKPGAKSRGRGIMCMNKLDDM---LGLVDGDHCIMKDSKWVVQKYIERPLLVH 387
Query: 128 GVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRD 187
KFD+R W+++T+ + +W Y E Y+RF ++PYS LD + HL N IQK Y+ D
Sbjct: 388 DTKFDVRQWFLVTDWNPLTVWFYRECYLRFSTQPYSTHTLDSSVHLCNNSIQKHYQPSPD 447
Query: 188 -PPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQ 235
P LPAE MW Q R + + +++ M+++++ + AQ
Sbjct: 448 RSPSLPAECMWSCSQFRSWLAASGRAALWKAVVVPGMQKAVIQTLLTAQ 496
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 337 VKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYII 396
V +A+++ +F++ G YP +R L GWVE+ + +++ T +
Sbjct: 36 VDKAIKEKKVFSVQGPYPVIRAGLRARGWVERRLPRPSFSQPRRHDHETETTDEGDSSDE 95
Query: 397 KNEKPEQVTSQYYEQKY--MSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKC-NF 453
+ E E Y MS + P + R++ + +L + + +++ K +F
Sbjct: 96 DDLGEEVERDDEAEDLYDLMSRLVRHETPYFYWTTRRDSVDCRSLRKEQMTNHYAKAGSF 155
Query: 454 CSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCF 513
+K+GL + L + F +PR + + + F+ +FR T+C SL+ YV +
Sbjct: 156 TTKVGLCMHLRNLQWFDAADPDTFFPRCYRLGAQDEKHAFIDDFRRTACTSLLLYVLEKY 215
Query: 514 E 514
E
Sbjct: 216 E 216
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRD-PPQLP 293
+ W+++T+ + +W Y E Y+RF ++PYS LD + HL N IQK Y+ D P LP
Sbjct: 394 RQWFLVTDWNPLTVWFYRECYLRFSTQPYSTHTLDSSVHLCNNSIQKHYQPSPDRSPSLP 453
Query: 294 AD 295
A+
Sbjct: 454 AE 455
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTC----PRCVVQKYIEKPLLIH 71
W++KP A G GI +L+D+ +G + C + VVQKYIE+PLL+H
Sbjct: 336 WIIKPGAKSRGRGIMCMNKLDDM---LGLVDGDHCIMKDSKWVVQKYIERPLLVH 387
>sp|Q9VM91|TTL3A_DROME Tubulin glycylase 3A OS=Drosophila melanogaster GN=TTLL3A PE=1 SV=1
Length = 992
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 15/173 (8%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP---RCVVQKYIEKPLLI 126
+ G + ++KP C G GI + ++++K+ +G + NL+ R VVQKYIE+PL++
Sbjct: 411 LDGYQNMWIVKPANKCRGRGIIL---MDNLKKILGVV-NLSIASKSRYVVQKYIERPLIL 466
Query: 127 HGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVR 186
KFD+R W++ITN +W Y E Y+RF S+ YS E+ HLTN IQK+Y N +
Sbjct: 467 FQTKFDIRQWFLITNTQPLVVWFYRESYLRFSSQEYSLSNHHESVHLTNYAIQKKYTNGK 526
Query: 187 DPPQLPAELMWDFKQLRDYFTK----NMNLPRKWDMIMRAMEESIVTIMRCAQ 235
+LP+E MWD + Y + NM L R I M ++IV M +Q
Sbjct: 527 RDKRLPSENMWDCYSFQAYLRQIGKYNMWLER----IFPGMRKAIVGCMLASQ 575
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query: 329 RRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKR--------TYTDFTL 380
R N L K +EA ++N IF I G + +VR+ L+ GWVEK+D R TY D T
Sbjct: 127 RMNELRRKAQEAAKQNKIFTIRGCFNSVRNALLMRGWVEKLDVHRKVMPAGQMTYEDLTQ 186
Query: 381 RKEFMLTNLDSAPYIIKNEKPEQVTSQYY---EQKYMSDALAERKPDLLFALRK---NYI 434
R + K + QY E+ MS L D L+ RK +YI
Sbjct: 187 R--------------LPKRKAGETRRQYVQKCERNIMSRFLEHMPVDFLWTNRKEKCDYI 232
Query: 435 TWSALEPDTVVSYFPKCNFCSKLGLNICLESTP-VFKNDSDSLKYPRGFNMSNEISMRRF 493
A P ++ F + F SK GL L F+ + + +PR +N+ + + F
Sbjct: 233 D-QAKNPGMTINKFHRAPFTSKEGLCSQLRDFHWFFEEGTAEMYFPRCYNVWSPEELGEF 291
Query: 494 VQNFRETSCFSLMR 507
++NF+ T+C + +R
Sbjct: 292 IENFKLTACVAFLR 305
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPA 294
+ W++ITN +W Y E Y+RF S+ YS E+ HLTN IQK+Y N + +LP+
Sbjct: 474 RQWFLITNTQPLVVWFYRESYLRFSSQEYSLSNHHESVHLTNYAIQKKYTNGKRDKRLPS 533
Query: 295 D-LGD-YNFLNYISEMTDY 311
+ + D Y+F Y+ ++ Y
Sbjct: 534 ENMWDCYSFQAYLRQIGKY 552
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP---RCVVQKYIEKPLLI 70
W++KP C G GI + ++++K+ +G + NL+ R VVQKYIE+PL++
Sbjct: 418 WIVKPANKCRGRGIIL---MDNLKKILGVV-NLSIASKSRYVVQKYIERPLIL 466
>sp|Q9Y4R7|TTLL3_HUMAN Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTLL3 PE=1 SV=2
Length = 772
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 4/169 (2%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAI-GTLKNLTCPRCVVQKYIEKPLLIHG 128
+ G + ++KP A G GI LE++ + + G + + VVQKYIE+PLLI G
Sbjct: 273 MEGDRNIWIVKPGAKSRGRGIMCMDHLEEMLKLVNGNPVVMKDGKWVVQKYIERPLLIFG 332
Query: 129 VKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRN-VRD 187
KFDLR W+++T+ + +W Y + Y+RF ++P+S LD + HL N IQK N
Sbjct: 333 TKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHR 392
Query: 188 PPQLPAELMWDFKQLRDYFTKNMNLPRKWD-MIMRAMEESIVTIMRCAQ 235
P LP + MW ++ + + + M P W +I+ M+++++ ++ +Q
Sbjct: 393 HPLLPPDNMWSSQRFQAHL-QEMGAPNAWSTIIVPGMKDAVIHALQTSQ 440
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRN-VRDPPQLP 293
+ W+++T+ + +W Y + Y+RF ++P+S LD + HL N IQK N P LP
Sbjct: 338 RQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHRHPLLP 397
Query: 294 AD--LGDYNFLNYISEM 308
D F ++ EM
Sbjct: 398 PDNMWSSQRFQAHLQEM 414
Score = 40.0 bits (92), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAI-GTLKNLTCPRCVVQKYIEKPLLIHGV 73
W++KP A G GI LE++ + + G + + VVQKYIE+PLLI G
Sbjct: 280 WIVKPGAKSRGRGIMCMDHLEEMLKLVNGNPVVMKDGKWVVQKYIERPLLIFGT 333
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 327 MSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEK 368
M+R + V+ AV++ IF I G YP +R L GWVEK
Sbjct: 1 MNRLRNAKIYVERAVKQKKIFTIQGCYPVIRCLLRRRGWVEK 42
>sp|A4Q9F1|TTLL8_MOUSE Protein monoglycylase TTLL8 OS=Mus musculus GN=Ttll8 PE=1 SV=1
Length = 832
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP-RCVVQKYIEKPLLIHG 128
I G+ + ++KP A G I ++E+I + T + VVQKYIE P+LI+
Sbjct: 387 IDGIRNIWIIKPAAKSRGRDIVCMDRVENILSLVAADSQTTKDNKWVVQKYIETPMLIYD 446
Query: 129 VKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRD- 187
KFD+R W+++T+ + IW Y E Y+RF ++ +S LD A HL N IQ++ +N ++
Sbjct: 447 TKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNSIQRRLKNDKER 506
Query: 188 PPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQ 235
P LP MW + ++Y K +I +M+ ++ MR AQ
Sbjct: 507 SPLLPCHNMWTSTRFQEYLQKRGRGGTWGSIIYPSMKRAVTNAMRVAQ 554
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 106/213 (49%), Gaps = 18/213 (8%)
Query: 306 SEMTDYVRRKRRMLDIGYTMDMS------RRNILNMKVKEAVEKNMIFAILGYYPAVRHK 359
S ++D ++ L G D+S R I ++A+++ IF+I G+YP +R
Sbjct: 62 STLSDGDHKEENKLKQGIPQDLSSSPKLDRYKIARQLTEKAIKERKIFSIYGHYPVIRAT 121
Query: 360 LVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKNEKPEQVTSQYYEQKY--MSDA 417
L GWVEK F + L NL S + ++ +++ + ++ + MS
Sbjct: 122 LRRKGWVEK--------KFNFFPK-ALQNLGSEDKSAETKENQEIALERFDDIHDVMSRL 172
Query: 418 LAERKPDLLFALRKNYITWSALEPDTVVSYFPK-CNFCSKLGLNICLESTPVFKNDSDSL 476
+ P LL+ ++++ + + +L D +++++ K +F +K+GL + + S P + + +
Sbjct: 173 VKNEIPYLLWTIKRDVVDYHSLTCDQMLNHYGKTASFTTKIGLCLNMRSLPWYVQANPNT 232
Query: 477 KYPRGFNMSNEISMRRFVQNFRETSCFSLMRYV 509
+PR + + E + F+ +FR T S++++V
Sbjct: 233 FFPRCYGLCTESEKQEFLDDFRRTVAASILKWV 265
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRD-PPQLP 293
+ W+++T+ + IW Y E Y+RF ++ +S LD A HL N IQ++ +N ++ P LP
Sbjct: 452 RQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNSIQRRLKNDKERSPLLP 511
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP-RCVVQKYIEKPLLIH 71
W++KP A G I ++E+I + T + VVQKYIE P+LI+
Sbjct: 394 WIIKPAAKSRGRDIVCMDRVENILSLVAADSQTTKDNKWVVQKYIETPMLIY 445
>sp|A4Q9E5|TTLL3_MOUSE Tubulin monoglycylase TTLL3 OS=Mus musculus GN=Ttll3 PE=1 SV=1
Length = 927
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 68 LLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTC-------PRCVVQKYI 120
L + G + ++KP A G GI +L+++ LK + C + +VQKYI
Sbjct: 464 LDMEGDRNIWIVKPGAKSRGRGIMCMNRLDEM------LKLVDCNPMLMKDGKWIVQKYI 517
Query: 121 EKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQK 180
E+PLLI G KFDLR W+++T+ + +W Y + Y+RF ++P+S LD + HL N IQ+
Sbjct: 518 ERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQR 577
Query: 181 QYR-NVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKW-DMIMRAMEESIVTIMRCAQ 235
+ P LP + MW ++ + + + ++ P+ W +I+ M+ +++ ++ +Q
Sbjct: 578 HLEASCHRHPMLPPDNMWSSQRFQAHL-QEVDAPKAWSSVIVPGMKAAVIHALQTSQ 633
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 327 MSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKE--- 383
M R + V+ AV++ IF I G YP +R L GWVEK T ++
Sbjct: 149 MGRLRNAKIHVERAVKQKKIFMIHGRYPVIRCLLRQRGWVEKKMVHPPGTALPAPQKDLD 208
Query: 384 -FMLTNLDSAPYIIKNEKPEQVTSQYYE-------------QKYMSDALAERKPDLLFAL 429
ML + D+ + E SQ + MS + P L++
Sbjct: 209 SSMLGDSDATEDEDEEENEMFRESQLLDLDGFLEFDDLDGIHALMSRMVRNETPYLIWTT 268
Query: 430 RKNYITWSALEPDTVVSYFPKC-NFCSKLGLNICLESTPVF-KNDSDSLKYPRGFNMSNE 487
R++ + L D +++++ + +F +K+GL + L + P F + D+DS +PR + + E
Sbjct: 269 RRDVLDCRFLSKDQMINHYARAGSFTTKVGLCLNLRNLPWFDEADADSF-FPRCYRLGAE 327
Query: 488 ISMRRFVQNFRETSCFSLMRYVKHCFEKHKPV 519
+ F+++F T+ ++++ V EK + +
Sbjct: 328 DDKKAFIEDFWLTAARNVLKLVVKLEEKSQSI 359
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYR-NVRDPPQLP 293
+ W+++T+ + +W Y + Y+RF ++P+S LD + HL N IQ+ + P LP
Sbjct: 531 RQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQRHLEASCHRHPMLP 590
Query: 294 AD 295
D
Sbjct: 591 PD 592
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 13/60 (21%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTC-------PRCVVQKYIEKPLLIHGV 73
W++KP A G GI +L+++ LK + C + +VQKYIE+PLLI G
Sbjct: 473 WIVKPGAKSRGRGIMCMNRLDEM------LKLVDCNPMLMKDGKWIVQKYIERPLLIFGT 526
>sp|A6PVC2|TTLL8_HUMAN Protein monoglycylase TTLL8 OS=Homo sapiens GN=TTLL8 PE=2 SV=4
Length = 850
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP-RCVVQKYIEKPLLIHG 128
I G+ + ++KP A G I ++E+I L+ + VVQKYIE PLLI
Sbjct: 344 IDGLRNIWIIKPAAKSRGRDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLLICD 403
Query: 129 VKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRN-VRD 187
KFD+R W+++T+ + IW Y E Y+RF ++ +S LD A HL N +QK +N V
Sbjct: 404 TKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQKYLKNDVGR 463
Query: 188 PPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQ 235
P LPA MW + ++Y + +I +M+++I M+ AQ
Sbjct: 464 SPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIYPSMKKAIAHAMKVAQ 511
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 10/213 (4%)
Query: 305 ISEMTDYVRRKRRMLDIGYTMDMS------RRNILNMKVKEAVEKNMIFAILGYYPAVRH 358
++ +D R+ L G + D++ R I ++A+++ IF+I G+YP VR
Sbjct: 10 LASSSDGDGREENKLKQGISQDLASSSRLDRYKIARQLTEKAIKEKKIFSIYGHYPVVRA 69
Query: 359 KLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKN-EKPEQVTSQYYEQKYMSDA 417
L GWVEK + E N D+ + +N E + T ++ MS
Sbjct: 70 ALRRKGWVEKKFHFLPKVIPDVEDEGARVNDDTCAKVKENQEMALEKTDNIHD--VMSRL 127
Query: 418 LAERKPDLLFALRKNYITWSALEPDTVVSYFPK-CNFCSKLGLNICLESTPVFKNDSDSL 476
+ P LL+ ++++ I + +L D +++++ K +F +K+GL + + S P + +
Sbjct: 128 VKNEMPYLLWTIKRDIIDYHSLTYDQMLNHYAKTASFTTKIGLCVNMRSLPWYVPANPDS 187
Query: 477 KYPRGFNMSNEISMRRFVQNFRETSCFSLMRYV 509
+PR +++ E + F+++FR T S++++V
Sbjct: 188 FFPRCYSLCTESEQQEFLEDFRRTMASSILKWV 220
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRN-VRDPPQLP 293
+ W+++T+ + IW Y E Y+RF ++ +S LD A HL N +QK +N V P LP
Sbjct: 409 RQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQKYLKNDVGRSPLLP 468
Query: 294 ADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEA 340
A +N + +Y++R+ R G + S + + +K A
Sbjct: 469 A----HNMWTS-TRFQEYLQRQGRGAVWGSVIYPSMKKAIAHAMKVA 510
Score = 32.7 bits (73), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP-RCVVQKYIEKPLLI 70
W++KP A G I ++E+I L+ + VVQKYIE PLLI
Sbjct: 351 WIIKPAAKSRGRDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLLI 401
>sp|Q9VM92|TTL3B_DROME Tubulin glycylase 3B OS=Drosophila melanogaster GN=TTLL3B PE=1 SV=2
Length = 756
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
+LKP G GI I L+DI + +N + +VQKYIE+PLLI+ KFD+R +
Sbjct: 404 ILKPGYQSRGIGIVIRSSLDDILQWTSNNQN---KKYIVQKYIERPLLIYRTKFDIRQYM 460
Query: 138 VITNID-KFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNV--RDPPQLPAE 194
++T D K IW Y + Y+RF S+ ++ L E+ HLTN +QK+Y+N RD +LP
Sbjct: 461 LLTITDTKVSIWTYRDCYLRFSSQEFTMDDLRESIHLTNNSVQKRYKNKTNRD-SRLPKN 519
Query: 195 LMWDFKQLRDYFTKNMNLP-RKWDMIMRAMEESIVTIMRCA 234
MW Q ++Y + M P W ++++V ++ +
Sbjct: 520 NMWSLDQFKNYL-RIMGAPDGSWSKTYNGFKQNLVAVVMAS 559
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 330 RNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNL 389
RN+ +V +A IF + G Y VR L+ GW+EK+ + R ++ ++ +L +
Sbjct: 125 RNVYRTRVIDAYRNRRIFTVYGNYHTVRRALMRRGWLEKLPASRHAKLQSMSEDALLEHA 184
Query: 390 ----DSAPYIIKNEKPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVV 445
D +I ++ K D AE +P R ++
Sbjct: 185 RRGNDYEAVVISKMINHFPAFFIWQGKGQRDLCAEVRPFRNRVRRSQFL----------- 233
Query: 446 SYFPKCNFCSKLGLNICLESTPVFKNDSD-SLKYPRGFNM-SNEISMR-RFVQNFRETSC 502
+F +K+GL C E ++ D + YPR + + N + R F++++++T
Sbjct: 234 ------DFSTKVGLVGCAEQERWYREDGVCGMSYPRFYRLGGNNLEERMAFIEDYQQTQA 287
Query: 503 FSLMRYVKHCFEKHKPV 519
SL+ YV+ +H+P
Sbjct: 288 RSLLLYVR----EHQPA 300
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 236 MWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRN 285
M IT+ K IW Y + Y+RF S+ ++ L E+ HLTN +QK+Y+N
Sbjct: 460 MLLTITDT-KVSIWTYRDCYLRFSSQEFTMDDLRESIHLTNNSVQKRYKN 508
>sp|A6NNM8|TTL13_HUMAN Tubulin polyglutamylase TTLL13 OS=Homo sapiens GN=TTLL13 PE=2 SV=2
Length = 815
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
+ KP + C G GI I R +IK +++ C Q+YI KPLLI G KFD+RV+
Sbjct: 200 ICKPDSGCQGRGIFITRNPREIKPG----EHMIC-----QQYISKPLLIDGFKFDMRVYV 250
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY----SNILLDEARHLTNVRIQKQYRN-VRD 187
+IT+ D +I+ Y EG RF + PY N L + HLTN I K N VRD
Sbjct: 251 LITSCDPLRIFTYEEGLARFATTPYMEPSHNNLDNVCMHLTNYAINKHNENFVRD 305
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPY----SNILLDEARHLTNVRIQKQYRN-VRD 288
+++ +IT+ D +I+ Y EG RF + PY N L + HLTN I K N VRD
Sbjct: 247 RVYVLITSCDPLRIFTYEEGLARFATTPYMEPSHNNLDNVCMHLTNYAINKHNENFVRD 305
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRVL 79
++ KP + C G GI I R +IK +++ C Q+YI KPLLI G +RV
Sbjct: 199 YICKPDSGCQGRGIFITRNPREIKPG----EHMIC-----QQYISKPLLIDGFKFDMRVY 249
Query: 80 KPVANCSGHGIRIYRQLEDIKRAIGT 105
+ +C +RI+ E + R T
Sbjct: 250 VLITSCD--PLRIFTYEEGLARFATT 273
>sp|A4Q9E8|TTLL6_MOUSE Tubulin polyglutamylase TTLL6 OS=Mus musculus GN=Ttll6 PE=2 SV=1
Length = 822
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 74 NVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDL 133
N + KP + C G GI I R +++IK +++ C Q YI KP +I G KFDL
Sbjct: 168 NKTYICKPDSGCQGRGIFITRSVKEIKPG----EDMIC-----QLYISKPFIIDGFKFDL 218
Query: 134 RVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDE----ARHLTNVRIQKQYRN 184
RV+ ++T+ D +++VY+EG RF + YS+ LD HLTN I K N
Sbjct: 219 RVYVLVTSCDPLRVFVYNEGLARFATTSYSHPNLDNLDEICMHLTNYSINKHSSN 273
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDE----ARHLTNVRIQKQYRN 285
+++ ++T+ D +++VY+EG RF + YS+ LD HLTN I K N
Sbjct: 219 RVYVLVTSCDPLRVFVYNEGLARFATTSYSHPNLDNLDEICMHLTNYSINKHSSN 273
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRV 78
++ KP + C G GI I R +++IK +++ C Q YI KP +I G +RV
Sbjct: 170 TYICKPDSGCQGRGIFITRSVKEIKPG----EDMIC-----QLYISKPFIIDGFKFDLRV 220
Query: 79 LKPVANCSGHGIRIYRQ 95
V +C + +Y +
Sbjct: 221 YVLVTSCDPLRVFVYNE 237
>sp|Q8N841|TTLL6_HUMAN Tubulin polyglutamylase TTLL6 OS=Homo sapiens GN=TTLL6 PE=1 SV=2
Length = 843
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 13/115 (11%)
Query: 74 NVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDL 133
N + KP + C G GI I R +++IK +++ C Q YI KP +I G KFDL
Sbjct: 169 NKTYICKPDSGCQGKGIFITRTVKEIKPG----EDMIC-----QLYISKPFIIDGFKFDL 219
Query: 134 RVWYVITNIDKFKIWVYHEGYVRFC----SKPYSNILLDEARHLTNVRIQKQYRN 184
R++ ++T+ D +I+VY+EG RF S+P ++ L D HLTN I K N
Sbjct: 220 RIYVLVTSCDPLRIFVYNEGLARFATTSYSRPCTDNLDDICMHLTNYSINKHSSN 274
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 40/173 (23%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFC----SKPYSNILLDEARHLTNVRIQKQYRNV-RDP 289
+++ ++T+ D +I+VY+EG RF S+P ++ L D HLTN I K N RD
Sbjct: 220 RIYVLVTSCDPLRIFVYNEGLARFATTSYSRPCTDNLDDICMHLTNYSINKHSSNFSRD- 278
Query: 290 PQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMI--- 346
A G L+ S + D Y ++ R+I ++ +K + + I
Sbjct: 279 ----AHSGSKRKLSTFSAY---------LEDHSYNVEQIWRDIEDVIIKTLISAHPIIRH 325
Query: 347 ---------------FAILGYYPAVRHKLVNMGWVEKIDSKRTY-TDFTLRKE 383
F ILG+ + HKL W+ +++ ++ TD L KE
Sbjct: 326 NYHTCFPNHTLNSACFEILGFDILLDHKL--KPWLLEVNHSPSFSTDSRLDKE 376
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRV 78
++ KP + C G GI I R +++IK +++ C Q YI KP +I G +R+
Sbjct: 171 TYICKPDSGCQGKGIFITRTVKEIKPG----EDMIC-----QLYISKPFIIDGFKFDLRI 221
Query: 79 LKPVANCSGHGIRIYRQ 95
V +C I +Y +
Sbjct: 222 YVLVTSCDPLRIFVYNE 238
>sp|Q641W7|TTLL9_RAT Probable tubulin polyglutamylase TTLL9 OS=Rattus norvegicus
GN=Ttll9 PE=2 SV=1
Length = 461
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVL 79
W++KPVA G GI ++R+L+DI K V V
Sbjct: 145 TWIMKPVARSQGKGIFLFRRLKDIMD------------------WRKGTAGKKVTSVETQ 186
Query: 80 KPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVI 139
AN + G R +D K ++ V Q+Y+E P LI G KFDLRV+ ++
Sbjct: 187 ATRANVNPSGSHDTRSSDDQK------DDIPVENYVAQRYVENPYLIGGRKFDLRVYVLV 240
Query: 140 TNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDPPQLPAE-LMW 197
+ + W+Y +G+ RF + ++ N + D HLTNV +QK P P + W
Sbjct: 241 MSYIPLRAWLYRDGFARFSNTRFTLNSIDDHYVHLTNVAVQKT-----SPDYHPKKGCKW 295
Query: 198 DFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVY 251
++ R Y P+ + + M+ + ++ Q +I++ F+++ Y
Sbjct: 296 TLQRFRQYLASKHG-PKAVETLFSDMDNIFIKSLQSVQK-VIISDKHCFELYGY 347
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 246 FKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQK 281
+ W+Y +G+ RF + ++ N + D HLTNV +QK
Sbjct: 246 LRAWLYRDGFARFSNTRFTLNSIDDHYVHLTNVAVQK 282
>sp|Q23K29|TTL3D_TETTS Tubulin glycylase 3D OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3D PE=3 SV=1
Length = 1015
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV 129
+ G + + ++KP G GI Y+ L +I I K++ + +VQKYIE P+LI
Sbjct: 679 LKGEDNIWIVKPAGLSRGRGITCYKNLVEI---IDHAKSMEL-QMIVQKYIENPVLIKQR 734
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNI-LLDEARHLTNVRI-QKQYRNVRD 187
KFD+R+W ++T+ + IW + E YVRF + YS L ++ +HLTN I +K+ + +D
Sbjct: 735 KFDIRIWVLVTDWNPLAIWYFDECYVRFSADSYSTKNLSNKFQHLTNNAISKKKAQQGQD 794
Query: 188 PPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVIT 241
L M+ +QL ++F + +++ + ++ I+ I++ W +++
Sbjct: 795 EITLQGN-MYTQEQLENFFIE----TEGYNVFQQKIKPQIINIIK----WSILS 839
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 424 DLLFALRKNYITWSALEPDTVVSYFPK-CNFCSKLGLNICLESTPVFKNDSDSLKYPRGF 482
DL + L I + + P+ +V++F CSK+GL L++ F N + +P+ F
Sbjct: 435 DLKWTLLGKDIDYDNILPNQIVNHFENNSKICSKIGLLNSLKNLYWFDNADLNCFFPQCF 494
Query: 483 NMSNEISMRRFVQNFRETSCFSLM-RYVKHCFEK 515
+M++ FV+NF+ + S++ +Y++ EK
Sbjct: 495 DMNDPDEFNDFVKNFKLSKAVSVLKKYLRLYLEK 528
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLI 70
W++KP G GI Y+ L +I I K++ + +VQKYIE P+LI
Sbjct: 686 WIVKPAGLSRGRGITCYKNLVEI---IDHAKSMEL-QMIVQKYIENPVLI 731
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 236 MWYVITNIDKFKIWVYHEGYVRFCSKPYSNI-LLDEARHLTNVRIQKQ 282
+W ++T+ + IW + E YVRF + YS L ++ +HLTN I K+
Sbjct: 740 IWVLVTDWNPLAIWYFDECYVRFSADSYSTKNLSNKFQHLTNNAISKK 787
>sp|A8CVX7|TTLL6_DANRE Tubulin polyglutamylase ttll6 OS=Danio rerio GN=ttll6 PE=2 SV=1
Length = 778
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 14/115 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
+ KP + C G GI + + +DI+ +++ C Q Y+ KP +I G KFDLR++
Sbjct: 166 ICKPDSGCQGRGIYLTKSSKDIRPG----EHMIC-----QVYMSKPFIIDGFKFDLRIYV 216
Query: 138 VITNIDKFKIWVYHEGYVRFC----SKPYSNILLDEARHLTNVRIQKQYRN-VRD 187
++T+ D F++++Y EG VRFC ++P + L D HLTN I K N VRD
Sbjct: 217 LVTSCDPFRVFMYDEGLVRFCTTHYTEPTVSNLEDVCMHLTNYAINKHSENFVRD 271
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 28/129 (21%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFC----SKPYSNILLDEARHLTNVRIQKQYRN-VRDP 289
+++ ++T+ D F++++Y EG VRFC ++P + L D HLTN I K N VRD
Sbjct: 213 RIYVLVTSCDPFRVFMYDEGLVRFCTTHYTEPTVSNLEDVCMHLTNYAINKHSENFVRD- 271
Query: 290 PQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAI 349
D G L+ K+ M D+ Y + K+ +E +I +
Sbjct: 272 ----EDTGSKRKLSSF---------KKHMEDMSYDTE---------KLWTDIEDAIIKTL 309
Query: 350 LGYYPAVRH 358
+ +P ++H
Sbjct: 310 ISAHPILKH 318
>sp|A4Q9F6|TTL13_MOUSE Tubulin polyglutamylase TTLL13 OS=Mus musculus GN=Ttll13 PE=2 SV=1
Length = 804
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 14/115 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
+ KP + C G GI I R ++IK +++ C Q+YI KP LI G KFD+R++
Sbjct: 200 ICKPDSGCQGRGIFITRTPKEIKPG----EHMIC-----QQYITKPFLIDGFKFDMRIYV 250
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY----SNILLDEARHLTNVRIQKQYRN-VRD 187
+IT+ D +I++Y EG RF + PY N L + HLTN I K N VRD
Sbjct: 251 LITSCDPLRIFMYEEGLARFATMPYVEPSHNNLEEVCMHLTNYAINKHNENFVRD 305
Score = 38.9 bits (89), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPY----SNILLDEARHLTNVRIQKQYRN-VRD 288
+++ +IT+ D +I++Y EG RF + PY N L + HLTN I K N VRD
Sbjct: 247 RIYVLITSCDPLRIFMYEEGLARFATMPYVEPSHNNLEEVCMHLTNYAINKHNENFVRD 305
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRV 78
++ KP + C G GI I R ++IK +++ C Q+YI KP LI G +R+
Sbjct: 198 TYICKPDSGCQGRGIFITRTPKEIKPG----EHMIC-----QQYITKPFLIDGFKFDMRI 248
Query: 79 LKPVANCSGHGIRIYRQLEDIKR 101
+ +C +RI+ E + R
Sbjct: 249 YVLITSCD--PLRIFMYEEGLAR 269
>sp|A2APC3|TTLL9_MOUSE Probable tubulin polyglutamylase TTLL9 OS=Mus musculus GN=Ttll9
PE=2 SV=2
Length = 461
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 31/235 (13%)
Query: 18 SCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVR 77
W++KPVA G GI ++R+L+DI + + K KP V
Sbjct: 143 GITWIMKPVARSQGKGIFLFRRLKDI---------MDWRKGTSGK---KP------TGVE 184
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
AN + G R +D K +L V Q+Y+E P LI G KFDLRV+
Sbjct: 185 TQPARANMNPSGSHDTRSSDDQK------DDLPVENYVAQRYVENPYLIGGRKFDLRVYV 238
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDPPQLPAELM 196
++ + + W+Y +G+ RF + ++ N + D HLTNV +QK + L
Sbjct: 239 LVMSYIPLRAWLYRDGFARFSNTRFTLNSIDDHYVHLTNVAVQKTSPDY----HLKKGCK 294
Query: 197 WDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVY 251
W ++ R Y P+ + + M+ + ++ Q +I++ F+++ Y
Sbjct: 295 WMLQRFRQYLASKHG-PKAVETLFSDMDNIFIKSLQSVQK-VIISDKHCFELYGY 347
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 246 FKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQK 281
+ W+Y +G+ RF + ++ N + D HLTNV +QK
Sbjct: 246 LRAWLYRDGFARFSNTRFTLNSIDDHYVHLTNVAVQK 282
>sp|Q23MT7|TTL6A_TETTS Probable beta-tubulin polyglutamylase OS=Tetrahymena thermophila
(strain SB210) GN=Ttll6a PE=4 SV=1
Length = 1189
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP A+C G GI + R L+D+ VVQ+Y+ KP LI G+KFD R++
Sbjct: 470 IVKPEASCQGRGIFLTRSLDDLN---------PSDHYVVQRYLNKPYLIDGLKFDFRLYV 520
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYSNILLDEAR----HLTNVRIQKQYRNVR 186
++ D +I++Y+EG RF ++ Y + D HLTN I K N +
Sbjct: 521 LLAGCDPLRIYLYYEGLTRFATEKYQEVNRDNIEDMCMHLTNYAINKDNPNFK 573
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRVL 79
+++KP A+C G GI + R L+D+ VVQ+Y+ KP LI G+ R+
Sbjct: 469 FIVKPEASCQGRGIFLTRSLDDLN---------PSDHYVVQRYLNKPYLIDGLKFDFRLY 519
Query: 80 KPVANCSGHGIRIYRQLEDIKR 101
+A C +RIY E + R
Sbjct: 520 VLLAGCD--PLRIYLYYEGLTR 539
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 236 MWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEAR----HLTNVRIQKQYRNVR 287
++ ++ D +I++Y+EG RF ++ Y + D HLTN I K N +
Sbjct: 518 LYVLLAGCDPLRIYLYYEGLTRFATEKYQEVNRDNIEDMCMHLTNYAINKDNPNFK 573
>sp|Q3SZH6|TTLL9_BOVIN Probable tubulin polyglutamylase TTLL9 OS=Bos taurus GN=TTLL9 PE=2
SV=1
Length = 461
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 33/236 (13%)
Query: 18 SCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVR 77
W++KPVA G GI ++R+L+DI + + K + N V
Sbjct: 143 GITWIMKPVARSQGKGIFLFRRLKDI---------MDWKKGTAGKKLTSLEAQPARNTV- 192
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
N SG D + + + V Q+YIE P LI G KFDLRV+
Sbjct: 193 ------NPSGS--------HDTRSSDDQKDEIPVENYVAQRYIENPYLIGGRKFDLRVYV 238
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDPPQLPAE-L 195
++ + + W+Y +G+ RF + ++ N + D+ HLTNV +QK P P +
Sbjct: 239 LVMSYIPLRAWLYRDGFARFSNTRFTLNSIDDQYVHLTNVAVQKT-----SPDYHPKKGC 293
Query: 196 MWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVY 251
W ++ R Y P + + M+ + ++ Q +I++ F+++ Y
Sbjct: 294 KWMLQRFRQYLASKHG-PEAVETLFSDMDNIFIRSLQSVQK-VIISDKHCFELYGY 347
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 246 FKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQK 281
+ W+Y +G+ RF + ++ N + D+ HLTNV +QK
Sbjct: 246 LRAWLYRDGFARFSNTRFTLNSIDDQYVHLTNVAVQK 282
>sp|Q23SI8|TTLL1_TETTS Probable alpha-tubulin polyglutamylase Ttll1 OS=Tetrahymena
thermophila (strain SB210) GN=Ttll1 PE=3 SV=1
Length = 433
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 74 NVVRVLKPVANCSGHGIRIYRQLEDIKRAIGT-----LKNLTCPRC-VVQKYIEKPLLIH 127
N ++KP + G GI + R+++ +K+ G L+ + VV +YI+ PLL+
Sbjct: 155 NATWIVKPASRSQGKGIFLLRKIQQLKKIGGGTNSNPLQAFSLKEAYVVSRYIDNPLLVG 214
Query: 128 GVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEAR---HLTNVRIQK 180
G KFDLR++ ++T+ K+++Y G+ RFC++ Y+ + + HLTNV IQK
Sbjct: 215 GRKFDLRIYALVTSYRPLKVYLYAMGFGRFCNEQYTQDIAEMDNMFIHLTNVAIQK 270
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 18 SCAWVLKPVANCSGHGIRIYRQLEDIKRAIGT-----LKNLTCPRC-VVQKYIEKPLLIH 71
+ W++KP + G GI + R+++ +K+ G L+ + VV +YI+ PLL+
Sbjct: 155 NATWIVKPASRSQGKGIFLLRKIQQLKKIGGGTNSNPLQAFSLKEAYVVSRYIDNPLLVG 214
Query: 72 G----------VNVVRVLKPVANCSGHGIRIYRQ-LEDIKRAIGTLKNLTCPRCVVQKYI 120
G V R LK G G Q +DI +LT +QK+
Sbjct: 215 GRKFDLRIYALVTSYRPLKVYLYAMGFGRFCNEQYTQDIAEMDNMFIHLT--NVAIQKFS 272
Query: 121 EKPLLIHGVKFDLR 134
+K HG K+ L+
Sbjct: 273 DKYSEKHGGKWSLQ 286
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEAR---HLTNVRIQK 281
+++ ++T+ K+++Y G+ RFC++ Y+ + + HLTNV IQK
Sbjct: 221 RIYALVTSYRPLKVYLYAMGFGRFCNEQYTQDIAEMDNMFIHLTNVAIQK 270
>sp|Q09647|TTLL4_CAEEL Tubulin polyglutamylase ttll-4 OS=Caenorhabditis elegans GN=ttll-4
PE=2 SV=3
Length = 601
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP A+ G GI + R+ +D T V Q YIE+PL I+ KFDLR++
Sbjct: 252 IVKPPASARGTGISVTRKPKDFP---------TTATLVAQHYIERPLTINRAKFDLRLYA 302
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS---NILLDEARHLTNVRIQK--QYRNVRDPPQLP 192
+ + ++++Y +G VRF S PYS + + ++ HLTN I K + V + P +P
Sbjct: 303 YVPTFEPLRVYIYDQGLVRFASVPYSHSVSTISNKYMHLTNYSINKLAEADGVANKP-VP 361
Query: 193 AELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIV 228
W L ++F + M + R + I R +EE I+
Sbjct: 362 K---WTLHHLWEHFDE-MGVDR--EKIQREIEEVII 391
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 208 KNMNLPRKWDMIMRAMEESIVTIMRCA---QMWYVITNIDKFKIWVYHEGYVRFCSKPYS 264
K + P ++ + E +TI R +++ + + ++++Y +G VRF S PYS
Sbjct: 269 KPKDFPTTATLVAQHYIERPLTINRAKFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPYS 328
Query: 265 ---NILLDEARHLTNVRIQK 281
+ + ++ HLTN I K
Sbjct: 329 HSVSTISNKYMHLTNYSINK 348
>sp|A8X9V4|TTLL4_CAEBR Tubulin polyglutamylase ttll-4 OS=Caenorhabditis briggsae GN=ttll-4
PE=3 SV=1
Length = 597
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 23/161 (14%)
Query: 53 LTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCP 112
L R + KY+E VN ++KP A+ G GI + R+ +D T
Sbjct: 228 LPTDRQELLKYLET-----DVNRHVIIKPPASARGSGITVTRKPKDFP---------TTA 273
Query: 113 RCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEAR- 171
V Q YIE+PL I+ KFDLR++ + + ++++Y +G VRF S PY+ + + +
Sbjct: 274 TLVAQHYIERPLTINRAKFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPYNPSVTNISNK 333
Query: 172 --HLTNVRIQK--QYRNVRDPPQLPAELMWDFKQLRDYFTK 208
HLTN I K + + + P +P W QL DYF +
Sbjct: 334 YMHLTNYSINKLAEADGIANKP-VPK---WALHQLWDYFDQ 370
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 208 KNMNLPRKWDMIMRAMEESIVTIMRCA---QMWYVITNIDKFKIWVYHEGYVRFCSKPYS 264
K + P ++ + E +TI R +++ + + ++++Y +G VRF S PY+
Sbjct: 265 KPKDFPTTATLVAQHYIERPLTINRAKFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPYN 324
Query: 265 NILLDEAR---HLTNVRIQK 281
+ + + HLTN I K
Sbjct: 325 PSVTNISNKYMHLTNYSINK 344
>sp|A4Q9F4|TTL11_MOUSE Tubulin polyglutamylase TTLL11 OS=Mus musculus GN=Ttll11 PE=2 SV=1
Length = 727
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP + C G GI + + D R GTL N VVQ+YI KPLLI +KFD+R++
Sbjct: 244 IVKPDSGCQGDGIYLIKDPCD-GRLTGTLHNRPA---VVQEYIRKPLLIDKLKFDIRLYV 299
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY 162
++ ++D +I++ +G RFC++PY
Sbjct: 300 LLKSLDPLEIYIAKDGLSRFCTEPY 324
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLI 70
+++KP + C G GI + + D R GTL N VVQ+YI KPLLI
Sbjct: 242 TFIVKPDSGCQGDGIYLIKDPCD-GRLTGTLHNRPA---VVQEYIRKPLLI 288
>sp|Q8NHH1|TTL11_HUMAN Tubulin polyglutamylase TTLL11 OS=Homo sapiens GN=TTLL11 PE=2 SV=1
Length = 538
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP C G GI + + DI+ A GTL++ VVQ+YI KPLLI +KFD+R++
Sbjct: 337 IVKPDGGCQGDGIYLIKDPSDIRLA-GTLQSRPA---VVQEYICKPLLIDKLKFDIRLYV 392
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY 162
++ ++D +I++ +G RFC++PY
Sbjct: 393 LLKSLDPLEIYIAKDGLSRFCTEPY 417
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLI 70
+++KP C G GI + + DI+ A GTL++ VVQ+YI KPLLI
Sbjct: 336 FIVKPDGGCQGDGIYLIKDPSDIRLA-GTLQSRP---AVVQEYICKPLLI 381
>sp|A4Q9F0|TTLL7_MOUSE Tubulin polyglutamylase TTLL7 OS=Mus musculus GN=Ttll7 PE=1 SV=1
Length = 912
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP GHGI + R + + + +VQ+YIEKP L+ G KFDLR++
Sbjct: 158 IVKPANGAMGHGISLIRNGDKVP---------SQDHLIVQEYIEKPFLMEGYKFDLRIYI 208
Query: 138 VITNIDKFKIWVYHEGYVRFCSK----PYSNILLDEARHLTNVRIQKQ 181
++T+ D KI++YH+G VR ++ P + L HLTN + K
Sbjct: 209 LVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNLTQLYMHLTNYSVNKH 256
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRV 78
+++KP GHGI + R + + + +VQ+YIEKP L+ G +R+
Sbjct: 156 TFIVKPANGAMGHGISLIRNGDKVP---------SQDHLIVQEYIEKPFLMEGYKFDLRI 206
Query: 79 LKPVANCSGHGIRIY 93
V +C I +Y
Sbjct: 207 YILVTSCDPLKIFLY 221
>sp|Q23AS2|TTL3E_TETTS Tubulin glycylase 3E OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3E PE=3 SV=1
Length = 1394
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV 129
+ G + ++KP AN G GI + +L++ AI + L +VQKYIE+PL+ G
Sbjct: 1016 VSGTKNIWIIKPSANSRGSGIYLVDKLDE---AIDS--GLKMQARIVQKYIERPLIFQGA 1070
Query: 130 K--------FDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDE----ARHLTNVR 177
K FD+R W ++T+ KI+ + Y+R CS+ + LD ++HLTN
Sbjct: 1071 KYKKLNNKKFDIRQWVLVTSFKPLKIYFFTSSYLRVCSQSFD---LDNIKILSKHLTNFS 1127
Query: 178 IQK 180
+ K
Sbjct: 1128 LNK 1130
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 19/96 (19%)
Query: 236 MWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDE----ARHLTNVRIQKQYRNVRDPPQ 291
W ++T+ KI+ + Y+R CS+ + LD ++HLTN + K
Sbjct: 1084 QWVLVTSFKPLKIYFFTSSYLRVCSQSFD---LDNIKILSKHLTNFSLNK---------- 1130
Query: 292 LPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDM 327
L N+ + E+ D++ + +I Y D+
Sbjct: 1131 --NSLAKENWDETVVELKDFISYLKEFKNIDYQEDV 1164
>sp|Q6ZT98|TTLL7_HUMAN Tubulin polyglutamylase TTLL7 OS=Homo sapiens GN=TTLL7 PE=2 SV=2
Length = 887
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP GHGI + R + + + +VQ+YIEKP L+ G KFDLR++
Sbjct: 158 IVKPANGAMGHGISLIRNGDKLP---------SQDHLIVQEYIEKPFLMEGYKFDLRIYI 208
Query: 138 VITNIDKFKIWVYHEGYVRFCSK----PYSNILLDEARHLTNVRIQKQ 181
++T+ D KI++YH+G VR ++ P + L HLTN + K
Sbjct: 209 LVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNLTQLYMHLTNYSVNKH 256
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNV-VRV 78
+++KP GHGI + R + + + +VQ+YIEKP L+ G +R+
Sbjct: 156 TFIVKPANGAMGHGISLIRNGDKLP---------SQDHLIVQEYIEKPFLMEGYKFDLRI 206
Query: 79 LKPVANCSGHGIRIY 93
V +C I +Y
Sbjct: 207 YILVTSCDPLKIFLY 221
>sp|Q80UG8|TTLL4_MOUSE Tubulin polyglutamylase TTLL4 OS=Mus musculus GN=Ttll4 PE=2 SV=3
Length = 1193
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 41/207 (19%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP A+ G GI++ + + + L VQ+Y+ KP LI G KFDLR++
Sbjct: 714 IVKPPASARGIGIQVIHKWSQLPKRRPLL---------VQRYLHKPYLISGSKFDLRIYV 764
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS---NILLDEARHLTNVRIQK---QYRNVRDPPQL 191
+T+ D +I+++ +G VRF S YS L ++ HLTN + K +Y+ D
Sbjct: 765 YVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLSNKFMHLTNYSVNKKNTEYQANADETAC 824
Query: 192 PAELMWDFKQLRDYFT-KNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWV 250
W K L +Y + K +N W+ I + ++I++ +TN+ K
Sbjct: 825 QGH-KWALKALWNYLSQKGINSDAIWEKIKDVVVKTIISSEP------YVTNLLKL---- 873
Query: 251 YHEGYVRFCSKPYS-------NILLDE 270
YVR +PYS +I+LDE
Sbjct: 874 ----YVR---RPYSCHELFGFDIMLDE 893
>sp|Q23FE2|TTL3C_TETTS Tubulin glycylase 3C OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3C PE=3 SV=1
Length = 1088
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV 129
+ G + V ++KP G GI Y L +I + + ++ + V+QKYIE PL+I
Sbjct: 793 LTGEDNVWIIKPAGLSRGRGITCYNNLVEILDHVKSKES----QWVIQKYIENPLIIKKR 848
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPY-SNILLDEARHLTNVRIQK-QYRNVRD 187
KFD+RVW ++T+ + IW Y + YVRF Y + L ++ HLTN + K + R+ +D
Sbjct: 849 KFDIRVWILVTDWNPLTIWHYTDCYVRFSVDDYDTENLQNKFTHLTNNMVSKLKQRDEKD 908
Score = 35.8 bits (81), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 236 MWYVITNIDKFKIWVYHEGYVRFCSKPY-SNILLDEARHLTNVRIQKQYRNVRDPPQLPA 294
+W ++T+ + IW Y + YVRF Y + L ++ HLTN + K + RD
Sbjct: 854 VWILVTDWNPLTIWHYTDCYVRFSVDDYDTENLQNKFTHLTNNMVSKLKQ--RDEKDDIT 911
Query: 295 DLGDY----NFLNYISEMTDYVRRKRRMLDI 321
+LG NF+NY+ + +++ D+
Sbjct: 912 ELGSMYFKENFINYLKTLLQSTFKEKEGYDV 942
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLI 70
W++KP G GI Y L +I + + + + V+QKYIE PL+I
Sbjct: 800 WIIKPAGLSRGRGITCYNNLVEILDHVKSKE----SQWVIQKYIENPLII 845
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 427 FALRKNYITWSALEPDTVVSYFPKCN-FCSKLGLNICLESTPVFKN-DSDSLKYPRGFNM 484
++L+ I + L+ +V++F K +K+GL L + +N D D+ YPR F++
Sbjct: 565 WSLQTKDIDYENLKDFQIVNHFQKSACITTKVGLCKSLRNLVWHENVDIDTF-YPRCFDL 623
Query: 485 SNEISMRRFVQNFRETSCFSLM-RYVKHCFEK 515
++ FV+ F+ + S++ RY++ FEK
Sbjct: 624 NDTEDFENFVEEFKSSKAESILKRYMRMYFEK 655
>sp|Q14679|TTLL4_HUMAN Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=TTLL4 PE=1 SV=2
Length = 1199
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 23/162 (14%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP A+ G GI++ + + + L VQ+Y+ KP LI G KFDLR++
Sbjct: 719 IVKPPASARGIGIQVIHKWSQLPKRRPLL---------VQRYLHKPYLISGSKFDLRIYV 769
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS---NILLDEARHLTNVRIQKQYRNVRDPPQLPAE 194
+T+ D +I+++ +G VRF S YS L ++ HLTN + K+ Q A+
Sbjct: 770 YVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNAEY----QANAD 825
Query: 195 LM------WDFKQLRDYFT-KNMNLPRKWDMIMRAMEESIVT 229
M W K L +Y + K +N W+ I + ++I++
Sbjct: 826 EMACQGHKWALKALWNYLSQKGVNSDAIWEKIKDVVVKTIIS 867
>sp|P38585|TTL_MOUSE Tubulin--tyrosine ligase OS=Mus musculus GN=Ttl PE=2 SV=2
Length = 377
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 72 GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV-- 129
G V + K A G GI I + ++ I + + V+QKY+E+PLL+
Sbjct: 142 GEGNVWIAKSSAGAKGEGILISSEASELLDFIDSQGQVH----VIQKYLERPLLLEPGHR 197
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDP 188
KFD+R W ++ + ++ I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 198 KFDIRSWVLVDH--QYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGK 255
Query: 189 PQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMR 221
+ E+ F++ Y T +N+ + ++++
Sbjct: 256 YEEGNEMF--FEEFNQYLTSALNITLESSILLQ 286
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 245 KFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQY 283
++ I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 210 QYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEY 249
>sp|P38160|TTL_PIG Tubulin--tyrosine ligase OS=Sus scrofa GN=TTL PE=1 SV=1
Length = 379
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 72 GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV-- 129
G V + K A G GI I + ++ I + V+QKY+E+PLL+
Sbjct: 142 GEGNVWIAKSSAGAKGEGILISSEATELLDFIDNQGQVH----VIQKYLERPLLLEPGHR 197
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPY-SNILLDEARHLTNVRIQKQYRNVRDP 188
KFD+R W ++ + ++ I++Y EG +R S+PY ++ D+ HLTN IQK+Y
Sbjct: 198 KFDIRSWVLVDH--QYNIYLYREGVLRTASEPYHTDNFQDKTCHLTNHCIQKEYSKNYGK 255
Query: 189 PQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMR 221
+ E+ F++ Y T +N+ + ++++
Sbjct: 256 YEEGNEMF--FEEFNQYLTSALNITLESSILLQ 286
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 245 KFKIWVYHEGYVRFCSKPY-SNILLDEARHLTNVRIQKQY 283
++ I++Y EG +R S+PY ++ D+ HLTN IQK+Y
Sbjct: 210 QYNIYLYREGVLRTASEPYHTDNFQDKTCHLTNHCIQKEY 249
>sp|Q8NG68|TTL_HUMAN Tubulin--tyrosine ligase OS=Homo sapiens GN=TTL PE=1 SV=2
Length = 377
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 72 GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV-- 129
G V + K A G GI I + ++ I + V+QKY+E PLL+
Sbjct: 142 GEGNVWIAKSSAGAKGEGILISSEASELLDFIDNQGQVH----VIQKYLEHPLLLEPGHR 197
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDP 188
KFD+R W ++ + ++ I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 198 KFDIRSWVLVDH--QYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGK 255
Query: 189 PQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMR 221
+ E+ FK+ Y T +N+ + ++++
Sbjct: 256 YEEGNEMF--FKEFNQYLTSALNITLESSILLQ 286
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 245 KFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQY 283
++ I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 210 QYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEY 249
>sp|Q9QXJ0|TTL_RAT Tubulin--tyrosine ligase OS=Rattus norvegicus GN=Ttl PE=2 SV=1
Length = 377
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 72 GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV-- 129
G V + K A G GI I + ++ I + V+QKY+E PLL+
Sbjct: 142 GEGNVWIAKSSAGAKGEGILISSEASELLDFIDNQGQVH----VIQKYLEHPLLLEPGHR 197
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDP 188
KFD+R W ++ + ++ I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 198 KFDIRSWVLVDH--QYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGK 255
Query: 189 PQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMR 221
+ E+ F++ Y T +N+ + ++++
Sbjct: 256 YEEGNEMF--FEEFNQYLTSALNITLENSILLQ 286
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 237 WYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQY 283
W ++ + ++ I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 204 WVLVDH--QYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEY 249
>sp|P38584|TTL_BOVIN Tubulin--tyrosine ligase OS=Bos taurus GN=TTL PE=1 SV=1
Length = 377
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 72 GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV-- 129
G V + K A G GI I ++ I + V+QKY+E+PLL+
Sbjct: 142 GEGNVWIAKSSAGAKGEGILISSDATELLDFIDNQGQVH----VIQKYLERPLLLEPGHR 197
Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDP 188
KFD+R W ++ + +F I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 198 KFDIRSWVLVDH--QFNIYLYREGVLRTASEPYHMDNFQDKTCHLTNHCIQKEYSKNYGK 255
Query: 189 PQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMR 221
+ E+ F+ Y T +N+ + ++++
Sbjct: 256 YEEGNEMF--FEAFNRYLTSALNITLESSILLQ 286
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 237 WYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQY 283
W ++ + +F I++Y EG +R S+PY + D+ HLTN IQK+Y
Sbjct: 204 WVLVDH--QFNIYLYREGVLRTASEPYHMDNFQDKTCHLTNHCIQKEY 249
>sp|Q23TC2|TTL3A_TETTS Tubulin glycylase 3A OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3A PE=1 SV=1
Length = 875
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KP G GIR + QLE + I + V QKY+E PL IH KFD+R W
Sbjct: 638 IVKPAGLSRGRGIRAFDQLEPLLNYIMGKDVM----WVAQKYMENPLTIHKKKFDIRQWV 693
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRD 187
++T + I+ Y Y+R C Y + L ++ HL N I K N +
Sbjct: 694 LVTEWNPLTIYFYDTCYIRICFDEYDPSDLQNKFAHLANNCISKHADNFEE 744
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 21 WVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIH 71
W++KP G GIR + QLE + I + V QKY+E PL IH
Sbjct: 637 WIVKPAGLSRGRGIRAFDQLEPLLNYIMGKDVM----WVAQKYMENPLTIH 683
>sp|Q91V51|TTLL1_MOUSE Probable tubulin polyglutamylase TTLL1 OS=Mus musculus GN=Ttll1
PE=1 SV=1
Length = 423
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKR------AIGTLKNLTCPRCVVQKYIEKPLLIHGVKF 131
++KP G GI + +L IK+ + T V+ YI PLLI G KF
Sbjct: 136 IMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSTKEAYVISVYINNPLLIGGRKF 195
Query: 132 DLRVWYVITNIDKFKIWVYHEGYVRFCS---KPYSNILLDEARHLTNVRIQKQ 181
DLR++ +++ + ++Y G+ RFC+ P ++ L + HLTNV IQK
Sbjct: 196 DLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKH 248
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 18 SCAWVLKPVANCSGHGIRIYRQLEDIK------RAIGTLKNLTCPRCVVQKYIEKPLLIH 71
S W++KP G GI + +L IK + + T V+ YI PLLI
Sbjct: 132 SSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSTKEAYVISVYINNPLLIG 191
Query: 72 G 72
G
Sbjct: 192 G 192
>sp|Q5PPI9|TTLL1_RAT Probable tubulin polyglutamylase TTLL1 OS=Rattus norvegicus
GN=Ttll1 PE=2 SV=1
Length = 423
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKR------AIGTLKNLTCPRCVVQKYIEKPLLIHGVKF 131
++KP G GI + +L IK+ + T V+ YI PLLI G KF
Sbjct: 136 IMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSTKEAYVISLYINNPLLIGGRKF 195
Query: 132 DLRVWYVITNIDKFKIWVYHEGYVRFCS---KPYSNILLDEARHLTNVRIQKQ 181
DLR++ +++ + ++Y G+ RFC+ P ++ L + HLTNV IQK
Sbjct: 196 DLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKH 248
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 18 SCAWVLKPVANCSGHGIRIYRQLEDIK------RAIGTLKNLTCPRCVVQKYIEKPLLIH 71
S W++KP G GI + +L IK + + T V+ YI PLLI
Sbjct: 132 SSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSTKEAYVISLYINNPLLIG 191
Query: 72 G 72
G
Sbjct: 192 G 192
>sp|Q0VC71|TTLL1_BOVIN Probable tubulin polyglutamylase TTLL1 OS=Bos taurus GN=TTLL1 PE=2
SV=1
Length = 423
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKR------AIGTLKNLTCPRCVVQKYIEKPLLIHGVKF 131
++KP G GI + +L IK+ + T V+ YI PLLI G KF
Sbjct: 136 IMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVTQSTKEAYVISLYINNPLLIGGRKF 195
Query: 132 DLRVWYVITNIDKFKIWVYHEGYVRFCS---KPYSNILLDEARHLTNVRIQKQ 181
DLR++ +++ + ++Y G+ RFC+ P ++ L + HLTNV IQK
Sbjct: 196 DLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKH 248
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 18 SCAWVLKPVANCSGHGIRIYRQLEDIK------RAIGTLKNLTCPRCVVQKYIEKPLLIH 71
S W++KP G GI + +L IK + + T V+ YI PLLI
Sbjct: 132 SSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVTQSTKEAYVISLYINNPLLIG 191
Query: 72 G 72
G
Sbjct: 192 G 192
>sp|Q5XI57|TTL10_RAT Protein polyglycylase TTLL10 OS=Rattus norvegicus GN=Ttll10 PE=2
SV=2
Length = 679
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLT-----------CPRC-VVQKYIEKPLL 125
+ KP A+ G GI + R E+ +++ P+ VVQ+Y++ PLL
Sbjct: 302 ICKPTASNQGKGIFLIRSQEEAAALQAKTQSIEDDPIYRKMPFRAPQARVVQRYVQNPLL 361
Query: 126 IHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQ---Y 182
+ G KFD+R + +I + ++ H GY R Y+ D + HLTN +QK+ Y
Sbjct: 362 LDGKKFDVRSYMLIACAMPYMVFFGH-GYARLTLSLYNPHSSDLSGHLTNQFMQKKSPLY 420
Query: 183 RNVRDPPQLPAELMWDFKQLRDY----FTKNMNLPRKW---------DMIMRAMEESIVT 229
++D +W + L Y F K+ LPR W IM ++ +
Sbjct: 421 MLLKD------STVWSMEHLNRYINDKFRKSKGLPRDWVFTTFTKRMQQIMSHCFLAVKS 474
Query: 230 IMRCAQMWYVITNID-----KFKIWV 250
+ C ++ + D FK+W+
Sbjct: 475 KLECKLGYFDLIGCDFLIDENFKVWL 500
>sp|O95922|TTLL1_HUMAN Probable tubulin polyglutamylase TTLL1 OS=Homo sapiens GN=TTLL1
PE=2 SV=1
Length = 423
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTC------PRCVVQKYIEKPLLIHGVKF 131
++KP G GI + +L IK+ K + V+ YI PLLI G KF
Sbjct: 136 IMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSNKEAYVISLYINNPLLIGGRKF 195
Query: 132 DLRVWYVITNIDKFKIWVYHEGYVRFCS---KPYSNILLDEARHLTNVRIQKQ 181
DLR++ +++ + ++Y G+ RFC+ P ++ L + HLTNV IQK
Sbjct: 196 DLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKH 248
>sp|Q3SXZ7|TTLL9_HUMAN Probable tubulin polyglutamylase TTLL9 OS=Homo sapiens GN=TTLL9
PE=2 SV=3
Length = 439
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 35 RIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIH--------GVNVVRVLKPVANCS 86
R +QLE R G L+ C K E P H + ++KPVA
Sbjct: 119 RFRKQLE---REAGKLEAAKCD--FFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQ 173
Query: 87 GHGIRIYRQLEDI-------KRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVI 139
G GI ++R+L+DI + + ++ V Q+YIE P LI G KFDLRV+ ++
Sbjct: 174 GKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLV 233
Query: 140 TNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAE-LMWD 198
++ F + G+ R + HLTNV +QK P P + W
Sbjct: 234 MSV--FAECLLWSGHRR------------QDVHLTNVAVQKT-----SPDYHPKKGCKWT 274
Query: 199 FKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVY 251
++ R Y P + + R ++ V ++ Q +I++ F+++ Y
Sbjct: 275 LQRFRQYLASKHG-PEAVETLFRDIDNIFVKSLQSVQK-VIISDKHCFELYGY 325
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 20 AWVLKPVANCSGHGIRIYRQLEDI-------KRAIGTLKNLTCPRCVVQKYIEKPLLIHG 72
W++KPVA G GI ++R+L+DI + + ++ V Q+YIE P LI G
Sbjct: 163 TWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGG 222
Query: 73 VNV-----VRVLKPVANC---SGH 88
V V+ A C SGH
Sbjct: 223 RKFDLRVYVLVMSVFAECLLWSGH 246
>sp|Q9BWV7|TTLL2_HUMAN Probable tubulin polyglutamylase TTLL2 OS=Homo sapiens GN=TTLL2
PE=5 SV=3
Length = 592
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 60 VQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKY 119
V +Y ++ ++ + + KP G GI I+ +D + +VQKY
Sbjct: 192 VAEYFQERQMLGTKHSYWICKPAELSRGRGILIFSDFKDF---------IFDDMYIVQKY 242
Query: 120 IEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRI 178
I PLLI K DLR++ +T I+VY EG VRF ++ + + L + HLTN I
Sbjct: 243 ISNPLLIGRYKCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFDLSNLQNNYAHLTNSSI 302
Query: 179 QKQ 181
K
Sbjct: 303 NKS 305
>sp|A4Q9F3|TTL10_MOUSE Protein polyglycylase TTLL10 OS=Mus musculus GN=Ttll10 PE=1 SV=1
Length = 704
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 40/206 (19%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLT-----------CPRC-VVQKYIEKPLL 125
+ KP A+ G GI + R E+ +++ P+ VVQ+Y++ PLL
Sbjct: 299 ICKPTASNQGKGIFLIRSQEEAAALQAKTQSIEDDPIYRKMPFRAPQARVVQRYVQNPLL 358
Query: 126 IHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQ---Y 182
+ G KFD+R + +I + ++ H GY R Y+ D + HLTN +QK+ Y
Sbjct: 359 LDGKKFDVRSYMLIACAMPYMVFFGH-GYARLTLSLYNPHSSDLSGHLTNQFMQKKSPLY 417
Query: 183 RNVRDPPQLPAELMWDFKQL----RDYFTKNMNLPRKW---------DMIMRAMEESIVT 229
+++ +W + L D F K LPR W IM ++ +
Sbjct: 418 TLLKE------STVWTMEHLNRYINDKFRKTKGLPRDWVFTTFTKRMQQIMSHCFLAVKS 471
Query: 230 IMRCAQMWYVITNID-----KFKIWV 250
+ C ++ + D FK+W+
Sbjct: 472 KLECKLGYFDLIGCDFLIDENFKVWL 497
>sp|A4Q9E4|TTLL2_MOUSE Probable tubulin polyglutamylase TTLL2 OS=Mus musculus GN=Ttll2
PE=2 SV=1
Length = 540
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
+ KP G GI I+ + D+ GT VVQKYI PLL+ K DLR++
Sbjct: 167 ICKPAELSRGRGIIIFSDIRDLMFK-GTY--------VVQKYICNPLLVGRYKCDLRIYV 217
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQK---QYRNVRDPPQLPA 193
IT I++Y EG VRF ++ + L D HLTN I K Y+ +++ +
Sbjct: 218 CITGFKPLTIYMYQEGLVRFATEKFDLRNLEDYYSHLTNSSINKLGASYQKIKE--VVGQ 275
Query: 194 ELMWD----FKQLRDYFTKNMNLPRKWD----MIMRAMEESIVTIMRCAQMW-YVITNID 244
W F LR++ ++ L +K + + AM S+ C +++ + I D
Sbjct: 276 GCKWTLSRFFSYLRNWDVDDLLLRQKISHMVILTVLAMAPSVPVTYNCFELFGFDILIDD 335
Query: 245 KFKIWVYHEGY 255
K W+ Y
Sbjct: 336 NLKPWLLEVNY 346
>sp|Q6EMB2|TTLL5_HUMAN Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=TTLL5 PE=1 SV=3
Length = 1281
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KPVA+ G G+ + I L V +YI PLLI KFD+R++
Sbjct: 178 IVKPVASSRGRGVYLINNPNQISLEENIL---------VSRYINNPLLIDDFKFDVRLYV 228
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRDPPQL 191
++T+ D I++Y EG RF + Y + + ++ HLTN + K+ Y + DP
Sbjct: 229 LVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDDPEVE 288
Query: 192 PAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQM 236
W + Y + R +M +E+ I+ + A++
Sbjct: 289 DYGNKWSMSAMLRYLKQEG---RDTTALMAHVEDLIIKTIISAEL 330
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRD 288
+++ ++T+ D I++Y EG RF + Y + + ++ HLTN + K+ Y + D
Sbjct: 225 RLYVLVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDD 284
Query: 289 PPQLPADLGDYNFLNYISEMTDYVRRKRR 317
P ++ DY +S M Y++++ R
Sbjct: 285 P-----EVEDYGNKWSMSAMLRYLKQEGR 308
>sp|Q5R978|TTLL5_PONAB Tubulin polyglutamylase TTLL5 OS=Pongo abelii GN=TTLL5 PE=2 SV=1
Length = 1299
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KPVA+ G G+ + I L V +YI PLLI KFD+R++
Sbjct: 178 IVKPVASSRGRGVYLINNPNQISLEENIL---------VSRYINNPLLIDDFKFDVRLYV 228
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRDPPQL 191
++T+ D I++Y EG RF + Y + + ++ HLTN + K+ Y + DP
Sbjct: 229 LVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDDPEVE 288
Query: 192 PAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQM 236
W + Y + R +M +E+ I+ + A++
Sbjct: 289 DYGNKWSMSAMLRYLKQEG---RDTTALMAHVEDLIIKTIISAEL 330
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRD 288
+++ ++T+ D I++Y EG RF + Y + + ++ HLTN + K+ Y + D
Sbjct: 225 RLYVLVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDD 284
Query: 289 PPQLPADLGDYNFLNYISEMTDYVRRKRR 317
P ++ DY +S M Y++++ R
Sbjct: 285 P-----EVEDYGNKWSMSAMLRYLKQEGR 308
>sp|Q6EEF3|TTLL5_CHLAE Tubulin polyglutamylase TTLL5 OS=Chlorocebus aethiops GN=TTLL5 PE=2
SV=2
Length = 1299
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KPVA+ G G+ + I L V +YI PLLI KFD+R++
Sbjct: 178 IVKPVASSRGRGVYLINNPNQISLEENIL---------VSRYINNPLLIDDFKFDVRLYV 228
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRDPPQL 191
++T+ D I++Y EG RF + Y + + ++ HLTN + K+ Y + DP
Sbjct: 229 LVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDDPEVE 288
Query: 192 PAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQM 236
W + Y + R +M +E+ I+ + A++
Sbjct: 289 DYGNKWSMSAMLRYLKQEG---RDTTALMAHVEDLIIKTIISAEL 330
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRD 288
+++ ++T+ D I++Y EG RF + Y + + ++ HLTN + K+ Y + D
Sbjct: 225 RLYVLVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDD 284
Query: 289 PPQLPADLGDYNFLNYISEMTDYVRRKRR 317
P ++ DY +S M Y++++ R
Sbjct: 285 P-----EVEDYGNKWSMSAMLRYLKQEGR 308
>sp|Q8CHB8|TTLL5_MOUSE Tubulin polyglutamylase TTLL5 OS=Mus musculus GN=Ttll5 PE=2 SV=3
Length = 1328
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWY 137
++KPVA+ G G+ + I L V +YI PLLI KFD+R++
Sbjct: 178 IVKPVASSRGRGVYLINNPNQISLEENIL---------VSRYINNPLLIDDFKFDVRLYV 228
Query: 138 VITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRDP 188
++T+ D I++Y EG RF + Y S + ++ HLTN + K+ Y + DP
Sbjct: 229 LVTSYDPLVIYLYEEGLARFATVRYDQGSKNIRNQFMHLTNYSVNKKSGDYVSCDDP 285
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 235 QMWYVITNIDKFKIWVYHEGYVRFCSKPY---SNILLDEARHLTNVRIQKQ---YRNVRD 288
+++ ++T+ D I++Y EG RF + Y S + ++ HLTN + K+ Y + D
Sbjct: 225 RLYVLVTSYDPLVIYLYEEGLARFATVRYDQGSKNIRNQFMHLTNYSVNKKSGDYVSCDD 284
Query: 289 PPQLPADLGDYNFLNYISEMTDYVRRKRR 317
P ++ DY +S M Y++++ +
Sbjct: 285 P-----EVEDYGNKWSMSAMLRYLKQEGK 308
>sp|Q4R7H0|TTL10_MACFA Protein polyglycylase TTLL10 OS=Macaca fascicularis GN=TTLL10 PE=2
SV=1
Length = 618
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 40/206 (19%)
Query: 78 VLKPVANCSGHGIRIYRQLEDI-------KRA----IGTLKNLTCPRC-VVQKYIEKPLL 125
+ KP A+ G GI + R E++ +RA I P+ VVQ+YI+ PLL
Sbjct: 238 ICKPTASNQGKGIFLLRNQEEVAALQAKTRRAEDDPIHHKSPFRGPQARVVQRYIQNPLL 297
Query: 126 IHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQ---Y 182
+ G KFD+R + +I + I+ H GY R Y D + HLTN +QK+ Y
Sbjct: 298 LDGRKFDVRSYLLIACTTPYMIFFSH-GYARLTLSLYDPHSSDLSGHLTNQFMQKKSPLY 356
Query: 183 RNVRDPPQLPAELMWDFKQLRDY----FTKNMNLPRKW--DMIMRAMEE-------SIVT 229
+++ + +W ++L Y F K LP+ W + + M++ + +
Sbjct: 357 VLLKE------DTVWSMERLNRYINTTFWKARGLPKDWVFTTLTKRMQQIMAHCFLAAKS 410
Query: 230 IMRCAQMWYVITNI-----DKFKIWV 250
+ C ++ + D FK+W+
Sbjct: 411 KLECKLGYFDLIGCDFLIDDNFKVWL 436
>sp|Q6ZVT0|TTL10_HUMAN Inactive polyglycylase TTLL10 OS=Homo sapiens GN=TTLL10 PE=1 SV=2
Length = 673
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 78 VLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLT-----------CPRC-VVQKYIEKPLL 125
+ KP A+ G GI + R E++ +++ P+ VVQ+YI+ PLL
Sbjct: 311 ICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLL 370
Query: 126 IHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQ 181
+ G KFD+R + +I + I+ H GY R Y D HLTN +QK+
Sbjct: 371 VDGRKFDVRSYLLIACTTPYMIFFGH-GYARLTLSLYDPHSSDLGGHLTNQFMQKK 425
>sp|P0CAZ0|TTL3B_TETTS Tubulin glycylase 3B OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3B PE=1 SV=1
Length = 1160
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 30/189 (15%)
Query: 70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHG- 128
++G + ++KP G GI+ + L+ I + + + VVQKYIE PLLI+
Sbjct: 881 LNGYRNIWIVKPNFLSRGRGIKCFNSLDKIMDYVVGKE----TQFVVQKYIENPLLINNK 936
Query: 129 ---------------------VKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYS-NIL 166
KFD+R W ++ + +IW + E Y+R CS ++ + L
Sbjct: 937 VNLFDHSNQNIFVLITFQINLQKFDMRQWAIVQDFCPPRIWFFEECYIRLCSVEHNIDDL 996
Query: 167 LDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEES 226
+ HLTN +QK Y +D +LM +Q Y + ++ I +++
Sbjct: 997 NNRFVHLTNNIVQK-YN--KDAYADKDDLMMSQEQFAQYLKETEGRDVFYEEIQPKLKQM 1053
Query: 227 IVTIMRCAQ 235
++ ++ Q
Sbjct: 1054 VIQSLKSCQ 1062
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,732,458
Number of Sequences: 539616
Number of extensions: 8083973
Number of successful extensions: 22599
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 22321
Number of HSP's gapped (non-prelim): 193
length of query: 520
length of database: 191,569,459
effective HSP length: 122
effective length of query: 398
effective length of database: 125,736,307
effective search space: 50043050186
effective search space used: 50043050186
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)