RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy10927
(858 letters)
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional.
Length = 421
Score = 367 bits (943), Expect = e-119
Identities = 175/448 (39%), Positives = 244/448 (54%), Gaps = 55/448 (12%)
Query: 417 AKRPNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVL 476
+R V Y++L + +CT E+KKAYRKLA+K+HPDK + EKFK+IS AYEVL
Sbjct: 19 GRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDPEKFKEISRAYEVL 77
Query: 477 SNPEKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGG 536
S+PEKR++YD+ G +EG GG
Sbjct: 78 SDPEKRKIYDEYG---------------------------------------EEGLEGGE 98
Query: 537 GGGFSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVIC 596
D+F++ GG G ++R G+D+V L V+LE +Y G ++KL + K+VIC
Sbjct: 99 QPA--DASDLFDLIFGGGRKPGGKKR---GEDIVSHLKVTLEQIYNGAMRKLAINKDVIC 153
Query: 597 DKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCK 656
CEG GG K A C C G G+ V ++Q G MI Q Q+ C+ C GQG I +CK
Sbjct: 154 ANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCK 212
Query: 657 TCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRS 716
C+GK + RKILEV+IDKG+ +Q KI F+GE D++P G+++ +L EKPH FKR
Sbjct: 213 NCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKRE 272
Query: 717 GNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKD 776
G +L I +I+L EAL GF I LD R ++++ PGEV+K DIK++ EGMPTYK
Sbjct: 273 GGDLFIT-KKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKS 331
Query: 777 PFEKGNLIIVFSVKFP--DVIPVDKVPAIEACLPPRPKVTIPENG---EEVVLETMDPE- 830
PF+KGNL + F V FP ++ +++ P P+ E V + +DPE
Sbjct: 332 PFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNPEEKKDLEDTEIEVVTAQNVDPEE 391
Query: 831 -KERAQNAYRQAHQEDEDQGPS-RVQCA 856
K+R Q Q ++DE RV C
Sbjct: 392 VKDRDQKQQYQEDEDDEHHQEGERVACR 419
Score = 144 bits (364), Expect = 4e-37
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 17/150 (11%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGG------------FGGYHRRGQQQQKNR 221
+FKEI++AY+VLS+PEKR++YD+ GEE + G FGG G++ +
Sbjct: 66 KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPADASDLFDLIFGG----GRKPGGKK 121
Query: 222 KGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVEKCSTCKGSGMTVQV 281
+G+D+V L VT+E++Y+GA+RKLA+ K+VIC+ CEG GG C C G G+ VQ+
Sbjct: 122 RGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQI 181
Query: 282 QQIGPGMIQQVQHVCSDCKGQGERINPKDK 311
+Q+G MI Q Q C+ C GQG+ I K
Sbjct: 182 RQMGS-MIHQTQSTCNSCNGQGKIIPESKK 210
Score = 86.8 bits (215), Expect = 6e-18
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 52/158 (32%)
Query: 15 FGGFDFGGFGGAQQGGAGGQRKTSKDTA-YYDLLGVKPGCSDDELKKAYRTMARKYHPDR 73
F GF F G G G GG+RK D Y++L + C+ E+KKAYR +A K+HPD+
Sbjct: 3 FSGFPFDGMPG--GGFDGGRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK 60
Query: 74 --DPK-------------NEDKQQ----------------------------------KN 84
DP+ + +K++
Sbjct: 61 GGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPADASDLFDLIFGGGRKPGGK 120
Query: 85 RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
++G+D+V L VT+E++Y+GA+RKLA+ K+VIC+ CEG
Sbjct: 121 KRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEG 158
Score = 66.0 bits (161), Expect = 3e-11
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 351 GRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAG 410
G GG C C G G+ VQ++Q+G MI Q Q C+ C GQG+ I KC+ C+G
Sbjct: 158 GHGGPKDAFVDCKLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSG 216
Query: 411 K 411
K
Sbjct: 217 K 217
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn
finger domain [Posttranslational modification, protein
turnover, chaperones].
Length = 371
Score = 302 bits (775), Expect = 5e-95
Identities = 139/379 (36%), Positives = 195/379 (51%), Gaps = 55/379 (14%)
Query: 423 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE---GEKFKQISMAYEVLSNP 479
+ + +Y+ILGV + +++E+KKAYRKLA KYHPD+NP + EKFK+I+ AYEVLS+P
Sbjct: 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDP 60
Query: 480 EKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGG 539
EKR YDQ G+ G + FGG G GG GG
Sbjct: 61 EKRAAYDQFGHAGFK-------------------AGGFGG-----------FGFGGFGGD 90
Query: 540 FSSPMDIFEMFMGGSLGGGRRR-RERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDK 598
F DIFE F GG GG RR R R+G D+ + L ++LE+ G K++++ ++V C
Sbjct: 91 F---GDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCST 147
Query: 599 CEGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKT 657
C G G K G ++CP C G+G TVQ+ G Q C C G G I KD C
Sbjct: 148 CHGSGAKPGTDPKTCPTCNGSGQVRTVQRTG---FFSFQQTCPTCNGTGKII--KDPCGK 202
Query: 658 CNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRS 716
C GK V+ +K + V+I G+ D +I +GEG+ G GD+ + + KPHP+F+R
Sbjct: 203 CKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERD 262
Query: 717 GNNLIIRPYEIALVEALCGFRRPIKTLDDR---DIIISAAPGEVMKHSDIKMVVGEGMPT 773
G++L I+ EA G + TLD R I GEV + + G+GMP
Sbjct: 263 GDDLYCE-VPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEVFR------LRGKGMP- 314
Query: 774 YKDPFEKGNLIIVFSVKFP 792
+G+L + V+ P
Sbjct: 315 KLRSGGRGDLYVRVKVETP 333
Score = 133 bits (336), Expect = 1e-33
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 175 FKEINKAYDVLSNPEKRRVYDQGGEEAINQGGFGGYH--------------------RRG 214
FKEIN+AY+VLS+PEKR YDQ G GGFGG+
Sbjct: 47 FKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGGGGGGR 106
Query: 215 QQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKI-VEKCSTCK 273
++ + R+G D+ + L +T+EE G +++ + ++V CS C G G K + C TC
Sbjct: 107 RRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCN 166
Query: 274 GSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
GSG VQ+ G Q C C G G+ I
Sbjct: 167 GSGQVRTVQRTG---FFSFQQTCPTCNGTGKII 196
Score = 64.6 bits (158), Expect = 8e-11
Identities = 21/41 (51%), Positives = 34/41 (82%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV S++E+KKAYR +A+KYHPDR+P +++ ++K
Sbjct: 6 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEK 46
Score = 64.2 bits (157), Expect = 9e-11
Identities = 37/114 (32%), Positives = 45/114 (39%), Gaps = 10/114 (8%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMI-EVPGGRGGKSKI- 358
G G R P R G +L+ I L EA+ G K + + G G K
Sbjct: 102 GGGGRRRPNRPRRGADLRYNLEITLEEAVFG---VKKEIRVTRSVTCSTCHGSGAKPGTD 158
Query: 359 VEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKK 412
+ C TC GSG VQ+ G Q C C G G+ I KD C C GK
Sbjct: 159 PKTCPTCNGSGQVRTVQRTG---FFSFQQTCPTCNGTGKII--KDPCGKCKGKG 207
Score = 41.1 bits (97), Expect = 0.002
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 85 RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGK 123
R+G D+ + L +T+EE G +++ + ++V CS C G
Sbjct: 113 RRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGS 151
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ. This model
represents bacterial forms of DnaJ, part of the
DnaK-DnaJ-GrpE chaperone system. The three components
typically are encoded by consecutive genes. DnaJ
homologs occur in many genomes, typically not near DnaK
and GrpE-like genes; most such genes are not included by
this family. Eukaryotic (mitochondrial and chloroplast)
forms are not included in the scope of this family.
Length = 354
Score = 277 bits (711), Expect = 6e-86
Identities = 133/371 (35%), Positives = 196/371 (52%), Gaps = 42/371 (11%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNPEKRELY 485
+Y+ILGV + +++E+KKAYRKLA KYHPD+N ++ EKFK+I+ AYEVLS+PEKR Y
Sbjct: 2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQY 61
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMD 545
DQ G+ G F G G G G G F D
Sbjct: 62 DQFGHAG------------------------FNG-GGGGGGGGFNGFDIGFFGDFG---D 93
Query: 546 IFEMFMGGSLGGGRRRRE--RKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGRG 603
IF F GG G GRRRR R+G+D+ + L ++ E+ G K++++ + C+ C G G
Sbjct: 94 IFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTG 153
Query: 604 GKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGKK 662
K G ++CP C GTG Q G QQ QT C C G+G I K+ C TC GK
Sbjct: 154 AKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQT-CPTCGGEGKII--KEPCSTCKGKG 210
Query: 663 TVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSGNNLI 721
V++RK + V I G+ Q++ +G+G+ E G +GD+ +V+ KPH +F+R GN+L
Sbjct: 211 RVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLY 270
Query: 722 IRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFEKG 781
I I+ +A+ G + TL D D+ + G + + + G+G+P +G
Sbjct: 271 IE-VPISFTQAILGGEIEVPTL-DGDVKLKIPAG--TQSGTVFRLKGKGVP-RLRGNGRG 325
Query: 782 NLIIVFSVKFP 792
+L++ V+ P
Sbjct: 326 DLLVTVKVETP 336
Score = 118 bits (298), Expect = 7e-29
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGGFGGY----------------------- 210
+FKEIN+AY+VLS+PEKR YDQ G N GG GG
Sbjct: 41 KFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFG 100
Query: 211 ---HRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSK-IV 266
+++ R+G+D+ + L +T EE G +++ + + C C G G K
Sbjct: 101 GGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDP 160
Query: 267 EKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
+ C TC G+G + Q G QQ Q C C G+G+ I
Sbjct: 161 KTCPTCGGTGQVRRQQGTPFGFFQQQQ-TCPTCGGEGKII 199
Score = 64.5 bits (158), Expect = 6e-11
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSK-IV 359
G R R G +L+ + EA+ G ++ I+ + R E G G K
Sbjct: 103 GGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIE-IP-RKESCETCHGTGAKPGTDP 160
Query: 360 EKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKKF 413
+ C TC G+G + Q G QQ Q C C G+G+ I K+ C TC GK
Sbjct: 161 KTCPTCGGTGQVRRQQGTPFGFFQQQQ-TCPTCGGEGKII--KEPCSTCKGKGR 211
Score = 60.7 bits (148), Expect = 1e-09
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDR--DPKNEDK 80
YY++LGV S++E+KKAYR +A+KYHPDR D + E+K
Sbjct: 2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEK 41
Score = 33.3 bits (77), Expect = 0.56
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 80 KQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
++ R+G+D+ + L +T EE G +++ + + C C G
Sbjct: 109 RRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHG 151
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional.
Length = 371
Score = 224 bits (574), Expect = 5e-66
Identities = 121/305 (39%), Positives = 162/305 (53%), Gaps = 52/305 (17%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG---EKFKQISMAYEVLSNPEKREL 484
+Y++LGV N ++DE+KKAYRKLA+KYHPD+NP + EKFK+I AYEVLS+P+KR
Sbjct: 6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAA 65
Query: 485 YDQGGYQGGRLWGRRRRLLLPNGYIRDVH-GWQFGGRSAAKGEAIKEGGSGGGGGGFSSP 543
YDQ G H ++ GG GG GGGGGF
Sbjct: 66 YDQYG-----------------------HAAFEQGGG----------GGGFGGGGGFGDI 92
Query: 544 M-DIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGR 602
DIF GG GGGR+R R G D+ + + ++LE+ RG K++++ V CD C G
Sbjct: 93 FGDIFGDIFGGGRGGGRQRARR-GADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGS 151
Query: 603 GGKKGA-AESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGK 661
G K G ++CP C G G V +QQ G +QQ C C G+G I KD CK C+G+
Sbjct: 152 GAKPGTSPKTCPTCHGAG-QVRMQQ-GFFTVQQ---TCPTCHGRGKII--KDPCKKCHGQ 204
Query: 662 KTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLE---HGDIIIVLEEKPHPVFKRSGN 718
V K L V I G+ +I +GEG E G GD+ + + K HP+F+R GN
Sbjct: 205 GRVEKEKTLSVKIPAGVDTGDRIRLSGEG--EAGERGGPAGDLYVQIHVKEHPIFERDGN 262
Query: 719 NLIIR 723
+L
Sbjct: 263 DLYCE 267
Score = 104 bits (262), Expect = 5e-24
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 26/154 (16%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQ----GGFGGYH----------------RR 213
+FKEI +AY+VLS+P+KR YDQ G A Q GGFGG R
Sbjct: 46 KFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGGGR 105
Query: 214 GQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKS-KIVEKCSTC 272
G +Q+ R+G D+ + + +T+EE G +++ + V C C G G K + C TC
Sbjct: 106 GGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTC 165
Query: 273 KGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
G+G V++QQ G +QQ C C G+G+ I
Sbjct: 166 HGAG-QVRMQQ-GFFTVQQ---TCPTCHGRGKII 194
Score = 64.4 bits (158), Expect = 9e-11
Identities = 22/41 (53%), Positives = 33/41 (80%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV S+DE+KKAYR +A KYHPDR+P +++ ++K
Sbjct: 6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEK 46
Score = 41.3 bits (98), Expect = 0.002
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 22/67 (32%)
Query: 360 EKCSTCKGSGM----------------TVQVQQIGPGMIQQVQHVCSDCKGQGERINPKD 403
C TC GSG V++QQ G +QQ C C G+G+ I KD
Sbjct: 143 VTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQ-GFFTVQQ---TCPTCHGRGKII--KD 196
Query: 404 KCRTCAG 410
C+ C G
Sbjct: 197 PCKKCHG 203
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional.
Length = 382
Score = 216 bits (553), Expect = 6e-63
Identities = 122/380 (32%), Positives = 181/380 (47%), Gaps = 38/380 (10%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNPEKRELY 485
+Y+ILGV N TQ+E+KKAYR+LA KYHPD N N EKFK+I+ AY+VLS+PEKR+LY
Sbjct: 5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLY 64
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMD 545
DQ G+ + F E I E
Sbjct: 65 DQFGHAA-----------FSGSGQQQQGQEGFSDFGGGNIEDILED--------VFDIFG 105
Query: 546 IFEMFMGGSLGGGRRRRER---KGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGR 602
++F RR+ + KG+D+ + +SLE+ Y GT L++ + V C+ C G
Sbjct: 106 FGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGT 165
Query: 603 GGKKGAAE-SCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGK 661
G G+ E CP C G+G F +I C C G+G P C CNG+
Sbjct: 166 GYDPGSGEKVCPTCGGSGEIYQRGGF-----FRISQTCPTCGGEGVLREP---CSKCNGR 217
Query: 662 KTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSGNNL 720
V ++ ++V I G+ + K+ G+G G GD+ I+++ KPHP+F+R G+NL
Sbjct: 218 GLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNL 277
Query: 721 IIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFEK 780
+ I + EA+ G + LD + + PG K D V G+GMP K
Sbjct: 278 YLD-VNITVAEAVLGTELEVPLLDGKKEKVKIPPG--TKEGDKIRVPGKGMPRLKGS-GY 333
Query: 781 GNLIIVFSVKFPDVIPVDKV 800
G+L++ + P + + K+
Sbjct: 334 GDLVVRVHIDVPKISMLSKL 353
Score = 102 bits (256), Expect = 3e-23
Identities = 71/268 (26%), Positives = 104/268 (38%), Gaps = 90/268 (33%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAI-----NQGGFGGY------------------ 210
+FKEIN+AY VLS+PEKR++YDQ G A Q G G+
Sbjct: 44 KFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDI 103
Query: 211 -------------HRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCE 257
R + Q+ KG+D+ T+ +++EE Y+G L + + V C C
Sbjct: 104 FGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACG 163
Query: 258 GRGGK-SKIVEKCSTCKGSGMTVQ------VQQIGP--GMIQQVQHVCSDCKGQG----- 303
G G + C TC GSG Q + Q P G ++ CS C G+G
Sbjct: 164 GTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKK 223
Query: 304 ERIN---------------------------PKD-------------KRVGNNLQMTQNI 323
E I P D +R G+NL + NI
Sbjct: 224 ETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNI 283
Query: 324 DLVEALCGFQRYIKTLDGRVIMIEVPGG 351
+ EA+ G + + LDG+ +++P G
Sbjct: 284 TVAEAVLGTELEVPLLDGKKEKVKIPPG 311
Score = 52.1 bits (125), Expect = 6e-07
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNE 78
YY++LGV + +E+KKAYR +ARKYHPD + E
Sbjct: 5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPE 40
Score = 40.9 bits (96), Expect = 0.002
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 82 QKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGK 123
Q+ KG+D+ T+ +++EE Y+G L + + V C C G
Sbjct: 124 QRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGT 165
Score = 34.4 bits (79), Expect = 0.23
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 314 GNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGK-SKIVEKCSTCKGSGMTV 372
G ++ T I L EA G ++ R + E GG G + C TC GSG
Sbjct: 129 GEDIYQTVEISLEEAYTGTTVSLEVP--RYVPCEACGGTGYDPGSGEKVCPTCGGSGEIY 186
Query: 373 QVQQIGPGMIQQVQHVCSDCKGQGERINPKDKC 405
Q G ++ C C G+G P KC
Sbjct: 187 Q-----RGGFFRISQTCPTCGGEGVLREPCSKC 214
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional.
Length = 386
Score = 210 bits (537), Expect = 1e-60
Identities = 140/383 (36%), Positives = 199/383 (51%), Gaps = 47/383 (12%)
Query: 422 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGE---KFKQISMAYEVLSN 478
M + +Y+ILGV N T++E+KKAYR+LA KYHPD NP + E KFK+I+ AYE+LS+
Sbjct: 1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSD 60
Query: 479 PEKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGG 538
P+KR YDQ G+ D G+ GG GG GGGG
Sbjct: 61 PQKRAQYDQFGHAA-----------------FDPGGFGQGGFGQ--------GGFGGGGF 95
Query: 539 --GFSSPMDIFEMFMGGSLGGGRRRRER---KGKDVVHQLTVSLEDLYRGTVKKLQLEKN 593
F DIFE G G GRRR E KG D+ + L ++ E+ GT K++++E+
Sbjct: 96 DFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERF 155
Query: 594 VICDKCEGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPK 652
CD C+G G K G+ +CP C GTG T Q G I I+T C C G+G I
Sbjct: 156 EKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRT-CDRCHGEGKII--T 212
Query: 653 DRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLE---HGDIIIVLEEKP 709
D C C G +R R+ ++V+I G+ D Q I GEG EPG++ +GD+ IV++ KP
Sbjct: 213 DPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEG--EPGIKGGPNGDLYIVIKVKP 270
Query: 710 HPVFKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGE 769
HP+FKR G N+ + I +A G I TLD + + + G + + G+
Sbjct: 271 HPLFKREGYNVYLE-MPITFTDAALGGEIEIPTLDGK-VKFTIPEG--TQTGTKFRLRGK 326
Query: 770 GMPTYKDPFEKGNLIIVFSVKFP 792
G+P + +G+ I+ ++ P
Sbjct: 327 GIP-HLRGRGRGDQIVKVYIEVP 348
Score = 78.7 bits (194), Expect = 2e-15
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 34/166 (20%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGG-------------------FGGY---- 210
+FKEIN+AY++LS+P+KR YDQ G A + GG FGG+
Sbjct: 47 KFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIF 106
Query: 211 ---------HRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGG 261
R + + +KG D+ + L +T EE G +++ +E+ C VC+G G
Sbjct: 107 EDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGA 166
Query: 262 K-SKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
K C C G+G Q G I ++ C C G+G+ I
Sbjct: 167 KPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIR-TCDRCHGEGKII 211
Score = 55.6 bits (134), Expect = 5e-08
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV +++E+KKAYR +A+KYHPD +P +++ +QK
Sbjct: 7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQK 47
Score = 34.4 bits (79), Expect = 0.23
Identities = 31/131 (23%), Positives = 44/131 (33%), Gaps = 36/131 (27%)
Query: 297 SDCKGQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKS 356
D G G R + G +++ + EA G ++ E+ R
Sbjct: 111 GDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEK------------EIEVER---- 154
Query: 357 KIVEKCSTCKGSGMT-----VQVQQI-GPGMIQQVQH----------VCSDCKGQGERIN 400
EKC CKGSG V G G ++ Q+ C C G+G+ I
Sbjct: 155 --FEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKII- 211
Query: 401 PKDKCRTCAGK 411
D C C G
Sbjct: 212 -TDPCNKCGGT 221
Score = 33.6 bits (77), Expect = 0.46
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 21/110 (19%)
Query: 13 FDFGGFDFGGFGGAQQGGAGGQRKTSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPD 72
FD GGF GGFG GG GG + D+ D + T R+
Sbjct: 75 FDPGGFGQGGFGQ---GGFGGGGFDFDFGGFGDIFE-------DIFGDFFGTGRRR---- 120
Query: 73 RDPKNEDKQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
+ +KG D+ + L +T EE G +++ +E+ C VC+G
Sbjct: 121 -------AETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKG 163
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional.
Length = 373
Score = 208 bits (532), Expect = 4e-60
Identities = 129/383 (33%), Positives = 183/383 (47%), Gaps = 73/383 (19%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGE---KFKQISMAYEVLSNPEKREL 484
+Y++LGV + ++DE+KKAYRKLAL+YHPD+NP+ E KFK+ + AYEVL + EKR
Sbjct: 6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRAR 65
Query: 485 YDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPM 544
YD+ G+ G GG GGFSS
Sbjct: 66 YDRFGHAGV--------------------------------------NGNGGFGGFSSAE 87
Query: 545 DIF--------EMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVIC 596
DIF ++F G R R + G D+ + LTVS +G L++ KNV C
Sbjct: 88 DIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC 147
Query: 597 DKCEGRGGKKG-AAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRC 655
D C G G G + E+C C G+G Q F QI C CRG+G I C
Sbjct: 148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFF-----QIAVPCPVCRGEGRVI--THPC 200
Query: 656 KTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLE---HGDIIIVLEEKPHPV 712
C G V+ + L+V I G+ ++ GEG EPG+ GD+ +V+ + +
Sbjct: 201 PKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEG--EPGVHGGPPGDLYVVITVEDDKI 258
Query: 713 FKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDR---DIIISAAPGEVMKHSDIKMVVGE 769
F+R G +L++ EI+ V+A G R + TLDD DI GEV + + G+
Sbjct: 259 FQRQGQDLVVT-QEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR------LRGK 311
Query: 770 GMPTYKDPFEKGNLIIVFSVKFP 792
G+P Y +KG+L++ SV P
Sbjct: 312 GLP-YLGSSQKGDLLVEVSVVTP 333
Score = 72.5 bits (178), Expect = 2e-13
Identities = 54/167 (32%), Positives = 69/167 (41%), Gaps = 42/167 (25%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAIN-QGGFGGYH--------------------- 211
+FKE +AY+VL + EKR YD+ G +N GGFGG+
Sbjct: 46 KFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGGFSSAEDIFSHFSDIFGDLFGFSG 105
Query: 212 ---RRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGK-SKIVE 267
RRG + Q G D+ + L V+ + G L + KNV C C G G E
Sbjct: 106 GGSRRGPRPQ---AGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPE 162
Query: 268 KCSTCKGSGMTVQVQ---QI--------GPGMIQQVQHVCSDCKGQG 303
C C GSG Q Q QI G G + + H C CKG G
Sbjct: 163 TCRHCGGSGQVRQSQGFFQIAVPCPVCRGEG--RVITHPCPKCKGSG 207
Score = 56.7 bits (137), Expect = 2e-08
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV S+DE+KKAYR +A +YHPDR+P N + +QK
Sbjct: 6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQK 46
Score = 29.3 bits (66), Expect = 9.0
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 13/48 (27%)
Query: 360 EKCSTCKGSGMTVQVQ---QI--------GPGMIQQVQHVCSDCKGQG 396
E C C GSG Q Q QI G G + + H C CKG G
Sbjct: 162 ETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEG--RVITHPCPKCKGSG 207
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional.
Length = 386
Score = 206 bits (526), Expect = 3e-59
Identities = 130/407 (31%), Positives = 208/407 (51%), Gaps = 70/407 (17%)
Query: 422 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG---EKFKQISMAYEVLSN 478
M ++ +Y++LGV T DE+KKAYRK A++YHPDKNP + EKFK+ + AY+VLS+
Sbjct: 1 MAEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSD 60
Query: 479 PEKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGG 538
P+KR YDQ G+ G GG + GG G G
Sbjct: 61 PDKRSRYDQFGHAG------------------------VGGAA---------GGGGFSGE 87
Query: 539 GFSSPMDIFEMF-------------MGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTV 585
G S DIF MF GG GGG ++R +G D+ ++ ++L+++ G
Sbjct: 88 GMSME-DIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVE 146
Query: 586 KKLQLEKNVICDKCEGRGGK-KGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRG 644
KK +++K V C C G G + +E+CP C+G+G VQ G +Q Q+ C C G
Sbjct: 147 KKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQT-QSTCPTCNG 205
Query: 645 QGSRINPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIII 703
+G I K +CK C G+ V +++ V I G+ + ++ NG+G+ G +GD+++
Sbjct: 206 EGKII--KKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLV 263
Query: 704 VLEEKPHPVFKRSGNNLIIRPYEIALV--EALCGFRRPIKTLDDR-DIIISAA--PGEVM 758
V+EE+PHP R N+LI Y + L A G + T+D + + I A PG+V+
Sbjct: 264 VIEEEPHPELIRDENDLI---YNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL 320
Query: 759 KHSDIKMVVGEGMPTYKDPFEKGNLIIVFSVKFPDVIPVDKVPAIEA 805
+ + +G+P+ + + G+L++ SV P+ + ++ +E
Sbjct: 321 R------LRNKGLPSV-NGYGTGDLLVNVSVYIPETLSKEEKQTLEK 360
Score = 93.0 bits (231), Expect = 4e-20
Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 35/174 (20%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQ----------------------------- 204
+FKE +AYDVLS+P+KR YDQ G +
Sbjct: 47 KFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHG 106
Query: 205 ---GGFGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGG 261
GGFGG+ G QQ+ R G D+ + + ++E+ +G +K ++K V CS C G G
Sbjct: 107 GGFGGFGGFGGGGSQQRVFR-GSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGA 165
Query: 262 K-SKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKRVG 314
+ + E C TCKGSG +VQ G + Q Q C C G+G+ I K K+ G
Sbjct: 166 EGNNGSETCPTCKGSGSVTRVQNTILGTM-QTQSTCPTCNGEGKIIKKKCKKCG 218
Score = 52.1 bits (125), Expect = 7e-07
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 307 NPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCK 366
+ + G++L++ ++L E G ++ K + V G + E C TCK
Sbjct: 120 SQQRVFRGSDLRVKVKLNLKEISTGVEKKFK-VKKYVPCSHCHGTGAEGNNGSETCPTCK 178
Query: 367 GSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
GSG +VQ G + Q Q C C G+G+ I K KC+ C G+
Sbjct: 179 GSGSVTRVQNTILGTM-QTQSTCPTCNGEGKII--KKKCKKCGGE 220
Score = 50.6 bits (121), Expect = 2e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV + DE+KKAYR A +YHPD++P +++ ++K
Sbjct: 7 YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEK 47
Score = 30.2 bits (68), Expect = 4.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 81 QQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
QQ+ +G D+ + + ++E+ +G +K ++K V CS C G
Sbjct: 121 QQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHG 162
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional.
Length = 378
Score = 205 bits (523), Expect = 8e-59
Identities = 120/357 (33%), Positives = 172/357 (48%), Gaps = 59/357 (16%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNPEKRELY 485
+Y +LGV N + E+K+AYRKLA + HPD NP+E EKFK+IS+AYEVLS+PEKR +
Sbjct: 5 YYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIV 64
Query: 486 DQGG---YQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSS 542
D GG G GG GG GGGF
Sbjct: 65 DLGGDPLESAG-------------------------------------GGGGGFGGGFGG 87
Query: 543 PMDIFEMFMGGSLGG-GRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEG 601
D+FE F GG G R R R G D + ++ + LE+ G K++ ++ V+CD+C G
Sbjct: 88 LGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHG 147
Query: 602 RGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTV--CSECRGQGSRINPKDRCKTC 658
+G + +C C G G TVQ+ + Q+ T C CRG G I D C C
Sbjct: 148 KGTAGDSKPVTCDTCGGRGEVQTVQR---SFLGQVMTSRPCPTCRGVGEVI--PDPCHEC 202
Query: 659 NGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEH-GDIIIVLEEKPHPVFKRSG 717
G VR R+ + V I G+ D +I +G+ PG GD+ + + E+PH VF R G
Sbjct: 203 AGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDG 262
Query: 718 NNL--IIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMP 772
++L + + +V+A G ++ + D I+ PG + + + G GMP
Sbjct: 263 DDLHCTVS---VPMVDAALGTTVTVEAILDGPSEITIPPG--TQPGSVITLRGRGMP 314
Score = 83.2 bits (206), Expect = 7e-17
Identities = 58/167 (34%), Positives = 84/167 (50%), Gaps = 30/167 (17%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGG---EEAINQG-----GFGGY------------HRR 213
+FKEI+ AY+VLS+PEKRR+ D GG E A G GFGG R
Sbjct: 44 KFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGFGGGFGGLGDVFEAFFGGGAASR 103
Query: 214 GQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRG--GKSKIVEKCST 271
G + + R G D + + + +EE +G +++ ++ V+C C G+G G SK V C T
Sbjct: 104 G-PRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPV-TCDT 161
Query: 272 CKGSGMTVQVQQIGPGMIQQV--QHVCSDCKGQGERI-NPKDKRVGN 315
C G G +VQ + + QV C C+G GE I +P + G+
Sbjct: 162 CGGRG---EVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGD 205
Score = 55.4 bits (134), Expect = 5e-08
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRK 86
YY LLGV SD E+K+AYR +AR+ HPD +P +E+ Q+K ++
Sbjct: 5 YYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKE 47
Score = 32.3 bits (74), Expect = 1.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 85 RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGK 123
R G D + + + +EE +G +++ ++ V+C C GK
Sbjct: 110 RPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGK 148
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional.
Length = 366
Score = 203 bits (517), Expect = 3e-58
Identities = 126/375 (33%), Positives = 192/375 (51%), Gaps = 57/375 (15%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGE---KFKQISMAYEVLSNPEKREL 484
+Y+ILGV + +++E+KK+YRKLA+KYHPD+NP + E FK+ + AYEVLS+P+KR +
Sbjct: 6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGI 65
Query: 485 YDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPM 544
YDQ G++G L G+ G G FSS
Sbjct: 66 YDQYGHEG----------LSGTGF----------------------SGFSGFDDIFSSFG 93
Query: 545 DIFEMFMG-GSLGGGRRR-RERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGR 602
DIFE F G G GR R R G D+ + LT+ + GT K+++++K C++C G
Sbjct: 94 DIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGS 153
Query: 603 GGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGK 661
G + G + +CP C G+G Q F I+T C CRG G I CKTC+G+
Sbjct: 154 GCEPGTSPTTCPQCGGSGQVTQSQGFF-----SIRTTCPRCRGMGKVI--VSPCKTCHGQ 206
Query: 662 KTVRDRKILEVHIDKGMIDQQKIVFNGEG-DQEPGLEHGDIIIVLEEKPHPVFKRSGNNL 720
VR K ++V I G+ ++ GEG G GD+ + L +PH F+R GN++
Sbjct: 207 GRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDV 266
Query: 721 IIRPYEIALVEALCGFRRPIKTLD-DRDIII--SAAPGEVMKHSDIKMVVGEGMPTYKDP 777
+ I+ V+A G + + TL+ +R++ I PG++ + G+G+P+ +
Sbjct: 267 HCK-VPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFK------GKGIPSLRG- 318
Query: 778 FEKGNLIIVFSVKFP 792
+G+ II VK P
Sbjct: 319 GGRGDQIIEVEVKVP 333
Score = 81.0 bits (200), Expect = 3e-16
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGGFGGY----------------------H 211
FKE +AY+VLS+P+KR +YDQ G E ++ GF G+
Sbjct: 46 LFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFGGG 105
Query: 212 RRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKI-VEKCS 270
RRG+ + R G D+ + L + E G +++ ++K C C G G + C
Sbjct: 106 RRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCP 165
Query: 271 TCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
C GSG Q Q G ++ C C+G G+ I
Sbjct: 166 QCGGSGQVTQSQ----GFF-SIRTTCPRCRGMGKVI 196
Score = 54.8 bits (132), Expect = 1e-07
Identities = 19/41 (46%), Positives = 32/41 (78%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV S++E+KK+YR +A KYHPDR+P +++ ++
Sbjct: 6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEEL 46
Score = 34.4 bits (79), Expect = 0.24
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 312 RVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMT 371
R G +L+ + +EA G ++ I+ + E G C C GSG
Sbjct: 115 RAGADLRYDLTLPFLEAAFGTEKEIR-IQKLETCEECHGSGCEPGTSPTTCPQCGGSGQV 173
Query: 372 VQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKKFSCQAKR 419
Q Q G ++ C C+G G+ I C+TC G+ +K
Sbjct: 174 TQSQ----GFF-SIRTTCPRCRGMGKVI--VSPCKTCHGQGRVRVSKT 214
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional.
Length = 397
Score = 196 bits (500), Expect = 2e-55
Identities = 131/364 (35%), Positives = 188/364 (51%), Gaps = 71/364 (19%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG---EKFKQISMAYEVLSNPEKREL 484
+Y++LGV + +DE+KKAYRKLALKYHPDKNP+ E FK+++ AYEVLSN +KR
Sbjct: 5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRR 64
Query: 485 YDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPM 544
YDQ G+ G G SAA G G GGGGG F+
Sbjct: 65 YDQFGHAGV-------------------------GSSAASGGG---PGYGGGGGDFN--- 93
Query: 545 DIF----EMFMGGS-------------LGGGRRRRER----KGKDVVHQLTVSLEDLYRG 583
DIF +MF GG+ GGG RRR G D+ +L ++LE++ +G
Sbjct: 94 DIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKG 153
Query: 584 TVKKLQLEKNVICDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQ--TVCSE 641
K L+++K V C +C G G K GA E+CP C G+G V+Q M Q T C
Sbjct: 154 VEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSG---EVRQASKTMFGQFVNITACPT 210
Query: 642 CRGQGSRINPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGD 700
C G+G + KDRC C G+ + ++V + G+ D + G+G+ P G GD
Sbjct: 211 CGGEGRVV--KDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGD 268
Query: 701 IIIVLEEKPHPVFKRSGNNLIIRPYEIALV--EALCGFRRPIKTLDDRD---IIISAAPG 755
+I+V+EEKPH +F R+G+++I Y +A+ + + G + + TLD I P
Sbjct: 269 LIVVIEEKPHELFVRNGDDVI---YNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPE 325
Query: 756 EVMK 759
+++
Sbjct: 326 TMLR 329
Score = 77.9 bits (192), Expect = 4e-15
Identities = 59/182 (32%), Positives = 81/182 (44%), Gaps = 49/182 (26%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGE-----EAINQGG--------------------FG 208
FKE+N+AY+VLSN +KRR YDQ G A + GG FG
Sbjct: 45 HFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFG 104
Query: 209 GYHRR------------GQQQQKNRK-----GKDVVHTLYVTMEELYSGAVRKLALEKNV 251
G RR G ++ R G D+ L +T+EE+ G + L ++K V
Sbjct: 105 GGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQV 164
Query: 252 ICSVCEGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHV--CSDCKGQGERINPK 309
C C G G K+ E C TC GSG +V+Q M Q ++ C C G+G + K
Sbjct: 165 PCKECNGTGSKTGATETCPTCHGSG---EVRQASKTMFGQFVNITACPTCGGEGRVV--K 219
Query: 310 DK 311
D+
Sbjct: 220 DR 221
Score = 54.8 bits (132), Expect = 1e-07
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV DE+KKAYR +A KYHPD++P N++ ++
Sbjct: 5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEH 45
Score = 43.6 bits (103), Expect = 3e-04
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 314 GNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQ 373
G +L++ + L E G ++ +K + + + G G K+ E C TC GSG +
Sbjct: 136 GTDLKIRLKLTLEEIAKGVEKTLKI--KKQVPCKECNGTGSKTGATETCPTCHGSG---E 190
Query: 374 VQQIGPGMIQQVQHV--CSDCKGQGERINPKDKCRTCAGK 411
V+Q M Q ++ C C G+G + KD+C C G+
Sbjct: 191 VRQASKTMFGQFVNITACPTCGGEGRVV--KDRCPACYGE 228
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional.
Length = 376
Score = 194 bits (496), Expect = 3e-55
Identities = 121/303 (39%), Positives = 165/303 (54%), Gaps = 47/303 (15%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNPEKRELY 485
+Y++LGV + ++DE+KKAYRKL+ KYHPD N EG EKFK+IS AYEVLS+ +KR Y
Sbjct: 6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQY 65
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMD 545
DQ G+ G PN FGG GG GGG GF D
Sbjct: 66 DQFGHAG------------PNQ--------GFGGGGFG-------GGDFGGGFGFE---D 95
Query: 546 IFEMFMGGSLGGGRRRRE---RKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGR 602
IF F G GGGRRR R+G D+ + +T++ E+ G K++++ K CD C G
Sbjct: 96 IFSSFFG---GGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGS 152
Query: 603 GGKKGA-AESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGK 661
G K G E+C C G+G V+V+Q P + C C G G I K++C TC+GK
Sbjct: 153 GAKPGTSKETCSHCGGSG-QVSVEQNTPFGRVVNRQTCPHCNGTGQEI--KEKCPTCHGK 209
Query: 662 KTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLE---HGDIIIVLEEKPHPVFKRSGN 718
VR RK + V I G+ + Q+I +GEG EPG+ GD+ +V +PH F+R G+
Sbjct: 210 GKVRKRKKINVKIPAGVDNGQQIRVSGEG--EPGVNGGPAGDLYVVFRVRPHEFFERDGD 267
Query: 719 NLI 721
++
Sbjct: 268 DIY 270
Score = 80.5 bits (199), Expect = 4e-16
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQG----GFGG----------------YHRR 213
+FKEI++AY+VLS+ +KR YDQ G NQG GFGG +
Sbjct: 45 KFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGGG 104
Query: 214 GQQQQKN--RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKI-VEKCS 270
G+++ N R+G D+ +T+ +T EE G +++ + K C C G G K E CS
Sbjct: 105 GRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCS 164
Query: 271 TCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPK 309
C GSG V V+Q P + C C G G+ I K
Sbjct: 165 HCGGSG-QVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEK 202
Score = 52.8 bits (127), Expect = 4e-07
Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVP-------GGRG 353
G G R +P R G +LQ T + EA+ G ++ I+ I E G +
Sbjct: 103 GGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIE------IPKEETCDTCHGSGAKP 156
Query: 354 GKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
G SK E CS C GSG V V+Q P + C C G G+ I K+KC TC GK
Sbjct: 157 GTSK--ETCSHCGGSG-QVSVEQNTPFGRVVNRQTCPHCNGTGQEI--KEKCPTCHGK 209
Score = 49.7 bits (119), Expect = 4e-06
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY++LGV S DE+KKAYR +++KYHPD + K E +K
Sbjct: 6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN-KEEGADEK 45
Score = 29.3 bits (66), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 85 RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
R+G D+ +T+ +T EE G +++ + K C C G
Sbjct: 114 RQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHG 151
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional.
Length = 380
Score = 188 bits (479), Expect = 8e-53
Identities = 116/358 (32%), Positives = 167/358 (46%), Gaps = 57/358 (15%)
Query: 425 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNPEKR 482
T +YD LGV + +QDE+KKAYRKL+ KYHPD N G EK+K++ AYE LS+P+KR
Sbjct: 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKR 62
Query: 483 ELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSS 542
YDQ G G NG FGG + G GG GGF
Sbjct: 63 AAYDQYGAAGA------------NG--------GFGGGAGGFGGF----DGSGGFGGFE- 97
Query: 543 PMDIFEMFMGGSLGGGRRRR---ERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKC 599
DIF F G GGG RR R+G D+ +++ + E+ G K++ + C C
Sbjct: 98 --DIFSSFFG---GGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTC 152
Query: 600 EGRGGKKG-AAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTC 658
G G K G + +C C G+G+ Q GM+++ Q C C G G I K+ C+TC
Sbjct: 153 NGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRR-QVTCDVCHGTGKEI--KEPCQTC 209
Query: 659 NGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSG 717
+G + + V I G+ Q+I G+G+ G +GD+ +V +P F+R G
Sbjct: 210 HGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDG 269
Query: 718 NNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYK 775
+ I I+ V+A G + T+ H D+++ + G T K
Sbjct: 270 ST-IYYTLPISFVQAALGDTVEVPTV----------------HGDVELKIPAGTQTGK 310
Score = 77.1 bits (190), Expect = 6e-15
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQG---------------GFGGYHR------ 212
++KE+ +AY+ LS+P+KR YDQ G N G GFGG+
Sbjct: 45 KYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAGGFGGFDGSGGFGGFEDIFSSFF 104
Query: 213 RGQQQQKN----RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRG---GKSKI 265
G ++N R+G D+ + + + EE G ++++ + C C G G G S +
Sbjct: 105 GGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPV 164
Query: 266 VEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
C C GSG+ Q GM+++ Q C C G G+ I
Sbjct: 165 T--CGKCHGSGVITVDTQTPLGMMRR-QVTCDVCHGTGKEI 202
Score = 61.3 bits (149), Expect = 8e-10
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRG---GKSK 357
G G R NP R G++LQ N+D EA+ G ++ + R G G G S
Sbjct: 106 GGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSY--NREATCHTCNGSGAKPGTSP 163
Query: 358 IVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
+ C C GSG+ Q GM+++ Q C C G G+ I K+ C+TC G
Sbjct: 164 VT--CGKCHGSGVITVDTQTPLGMMRR-QVTCDVCHGTGKEI--KEPCQTCHGT 212
Score = 55.9 bits (135), Expect = 5e-08
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 41 TAYYDLLGVKPGCSDDELKKAYRTMARKYHPD--RDPKNEDKQQKNRKGKDVVH 92
T YYD LGV S DE+KKAYR +++KYHPD ++P E+K ++ ++ + +
Sbjct: 4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLS 57
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional.
Length = 377
Score = 187 bits (477), Expect = 1e-52
Identities = 110/304 (36%), Positives = 153/304 (50%), Gaps = 40/304 (13%)
Query: 422 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKN--PNEGEKFKQISMAYEVLSNP 479
M +Y+ILG+ + + +++KKAYRKLA+KYHPDKN P+ EKFK+IS AY VLS+
Sbjct: 1 MATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDA 60
Query: 480 EKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGG 539
EKR YD+ G+ G + N Y E I G GG G
Sbjct: 61 EKRAQYDRFGHAG-----------IDNQY---------------SAEDIFRGADFGGFG- 93
Query: 540 FSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKC 599
DIFEMF GG G R R+G D+ + L ++LE+ G K + + + C C
Sbjct: 94 -----DIFEMFFGGG-GRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTC 147
Query: 600 EGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTC 658
G G K G + + CP C GTG VT + P T CS C G+G I + C C
Sbjct: 148 SGTGAKPGTSPKRCPTCGGTGQ-VTTTRSTPLGQFVTTTTCSTCHGRGQVI--ESPCPVC 204
Query: 659 NGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSG 717
+G VR + + V++ G ++ +GEG+ PG GD+ IVL K H F+R G
Sbjct: 205 SGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVG 264
Query: 718 NNLI 721
+++I
Sbjct: 265 DDII 268
Score = 77.2 bits (190), Expect = 7e-15
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQ-------------GGF--------GGYHR 212
+FKEI++AY VLS+ EKR YD+ G I+ GGF GG R
Sbjct: 46 KFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDIFRGADFGGFGDIFEMFFGGGGR 105
Query: 213 RGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVEK-CST 271
RG+ R+G D+ + LY+T+EE G + + + + CS C G G K K C T
Sbjct: 106 RGRMGP--RRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPT 163
Query: 272 CKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
C G+G + P CS C G+G+ I
Sbjct: 164 CGGTGQVTTTRS-TPLGQFVTTTTCSTCHGRGQVI 197
Score = 51.8 bits (124), Expect = 9e-07
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Query: 37 TSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDR--DPKNEDK 80
T++D YY++LG+ S +++KKAYR +A KYHPD+ +P E+K
Sbjct: 3 TTRD--YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEK 46
Score = 32.9 bits (75), Expect = 0.75
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 36/126 (28%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVE 360
G G R R G++L+ I L EA G ++ I +VP E
Sbjct: 101 GGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDI----------DVPR--------AE 142
Query: 361 KCSTCKGSGM--------------TVQVQQI--GPGMIQQVQHVCSDCKGQGERINPKDK 404
+CSTC G+G T QV P CS C G+G+ I +
Sbjct: 143 RCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVI--ESP 200
Query: 405 CRTCAG 410
C C+G
Sbjct: 201 CPVCSG 206
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional.
Length = 365
Score = 180 bits (459), Expect = 3e-50
Identities = 125/375 (33%), Positives = 194/375 (51%), Gaps = 53/375 (14%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEK---FKQISMAYEVLSNPEKREL 484
+Y+ILG+ ++DE+KKAYRK+A+KYHPDKN E FK+ + AYEVL + KR
Sbjct: 5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQ 64
Query: 485 YDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGG---FS 541
YD+ G+ +A +G EG SGG G F
Sbjct: 65 YDRFGH------------------------------TAFEGGGGFEGFSGGFSGFSDIFE 94
Query: 542 SPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEG 601
DIF+ F G+ G + R+ KG+D+ +Q+ +SLED Y G + + +N++C+ C G
Sbjct: 95 DFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLG 154
Query: 602 RGGKKGAAES-CPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRI-NPKDRCKTCN 659
+ +KG + S C C G+G + G G ++ T C +C G G I NP CK+C
Sbjct: 155 KKSEKGTSPSICNMCNGSGRVMQ----GGGFF-RVTTTCPKCYGNGKIISNP---CKSCK 206
Query: 660 GKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIIIVLEEKPHPVFKRSGN 718
GK +++ ++ +E+ I G+ D Q+I G+G P ++GD+ I + KPH +FKR+G
Sbjct: 207 GKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGK 266
Query: 719 NLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPF 778
+L I+ +A G I+T+ + I I G ++ + ++ EGMP
Sbjct: 267 DLYAT-LPISFTQAALGKEIKIQTIASKKIKIKIPKG--TENDEQIIIKNEGMPILHT-- 321
Query: 779 EK-GNLIIVFSVKFP 792
EK GNLI++ +K P
Sbjct: 322 EKFGNLILIIKIKTP 336
Score = 61.9 bits (150), Expect = 5e-10
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 175 FKEINKAYDVLSNPEKRRVYDQGGEEAINQG--------GFGGYH--------------- 211
FKE +AY+VL + KR YD+ G A G GF G+
Sbjct: 46 FKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGFSGGFSGFSDIFEDFGDIFDSFFT 105
Query: 212 -RRGQQQ-QKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGG-KSKIVEK 268
RGQ + +K+ KG+D+ + + +++E+ Y G + + +N++C C G+ K
Sbjct: 106 GNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSI 165
Query: 269 CSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI-NP 308
C+ C GSG +Q G G +V C C G G+ I NP
Sbjct: 166 CNMCNGSGRVMQ----GGGFF-RVTTTCPKCYGNGKIISNP 201
Score = 51.5 bits (123), Expect = 1e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQ 81
YY++LG+ G S DE+KKAYR +A KYHPD++ N++ +
Sbjct: 5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAE 43
Score = 35.7 bits (82), Expect = 0.084
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 76 KNEDKQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGK 123
+ +DK +K+ KG+D+ + + +++E+ Y G + + +N++C C GK
Sbjct: 108 RGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGK 155
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional.
Length = 380
Score = 178 bits (452), Expect = 3e-49
Identities = 109/326 (33%), Positives = 162/326 (49%), Gaps = 43/326 (13%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG---EKFKQISMAYEVLSNPEKREL 484
+Y++LG++ + DE+KKA+RKLA+KYHPDKN EKFK+I+ AY+VLS+P+K+
Sbjct: 6 YYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQ 65
Query: 485 YDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPM 544
YDQ G NG G+ GG G GGF
Sbjct: 66 YDQFGTAD------------FNGA----GGFGSGGF---------GGFDFSDMGGFG--- 97
Query: 545 DIFEMFMGGSLGGGRRRRE--RKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGR 602
DIF+ F GG G RRR ++G D+ + + ++ E+ G K++ + +N C+ C G
Sbjct: 98 DIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGT 157
Query: 603 GGKKG-AAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGK 661
G K G + ++C C GTG + VQ+ P T C +C G G I +D C C+GK
Sbjct: 158 GAKPGTSPKTCDKCGGTG-QIRVQRNTPLGSFVSTTTCDKCGGSGKVI--EDPCNKCHGK 214
Query: 662 KTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLE---HGDIIIVLEEKPHPVFKRSGN 718
VR + ++V++ G+ I G+G E G GD+ I + PH FKR G
Sbjct: 215 GKVRKNRKIKVNVPAGVDTGNVIPLRGQG--EHGKNGGPTGDLYINIRVAPHKTFKRKGF 272
Query: 719 NLIIRPYEIALVEALCGFRRPIKTLD 744
++ I I+ +A G + T+D
Sbjct: 273 DIYID-KHISFAKAALGTEIKVPTVD 297
Score = 72.9 bits (179), Expect = 1e-13
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAIN------QGGFGGYHRR-------------- 213
+FKEIN+AY VLS+P+K+ YDQ G N GGFGG+
Sbjct: 46 KFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFG 105
Query: 214 ----GQQQQKN--RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVE 267
+++N ++G D+ +T+ +T EE G +++++ +N C C G G K
Sbjct: 106 GGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSP 165
Query: 268 K-CSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
K C C G+G ++VQ+ P C C G G+ I
Sbjct: 166 KTCDKCGGTG-QIRVQRNTPLGSFVSTTTCDKCGGSGKVI 204
Score = 59.0 bits (143), Expect = 4e-09
Identities = 24/46 (52%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Query: 38 SKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
SKD YY++LG++ G SDDE+KKA+R +A KYHPD++ N++ ++K
Sbjct: 3 SKD--YYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEK 46
Score = 30.1 bits (68), Expect = 5.9
Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 28/111 (25%)
Query: 12 FFDFGGFDFGGFGGAQQGGAGGQRKTSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHP 71
F GGF GGFGG GG + G G S R+ P
Sbjct: 74 FNGAGGFGSGGFGGFDFSDMGGFGDI-----FDSFFGGGFGSSS----------RRRNGP 118
Query: 72 DRDPKNEDKQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
R G D+ +T+ +T EE G +++++ +N C C G
Sbjct: 119 QR-------------GADIEYTINLTFEEAVFGVEKEISVTRNENCETCNG 156
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional.
Length = 378
Score = 177 bits (451), Expect = 5e-49
Identities = 123/377 (32%), Positives = 190/377 (50%), Gaps = 44/377 (11%)
Query: 422 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNP 479
M ++ +Y++LGV N + E+KKAYRKLA KYHPD + EG EKFK+IS AY VLS+
Sbjct: 1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDD 60
Query: 480 EKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGG 539
EKR+ YDQ G+ G + G + + N D+ G G G
Sbjct: 61 EKRQRYDQFGHAG--MDGFSQEDIFNNINFEDIFQ--------------------GFGFG 98
Query: 540 FSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKC 599
+IF+MF GGG R ++G D+ ++ ++LE+ G K +++ C C
Sbjct: 99 IG---NIFDMF---GFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVC 152
Query: 600 EGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTC 658
G + G+ ++CP C GTG V+ G + + T C +C+G+G + + C C
Sbjct: 153 NGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTT-CPDCQGEGKIV--EKPCSNC 209
Query: 659 NGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSG 717
+GK VR+ K + V I G+ ++ +GEG+ + G E GD+ +V++ KPH +F+R G
Sbjct: 210 HGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREG 269
Query: 718 NNLIIRPYE--IALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYK 775
NL YE I+ V+A G + T+ D + + G + + G GMP+ +
Sbjct: 270 ANLY---YEKPISFVQAALGDTVDVPTI-DGPVELKIPAG--TQSGTTFRLKGHGMPSLR 323
Query: 776 DPFEKGNLIIVFSVKFP 792
KGNL + V P
Sbjct: 324 WS-GKGNLYVKVKVVVP 339
Score = 79.9 bits (197), Expect = 8e-16
Identities = 54/163 (33%), Positives = 75/163 (46%), Gaps = 36/163 (22%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGE-----------------EAINQG----------- 205
+FKEI++AY VLS+ EKR+ YDQ G E I QG
Sbjct: 46 KFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQEDIFNNINFEDIFQGFGFGIGNIFDM 105
Query: 206 -GFGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG-RGGKS 263
GFGG R G Q +G D+ + +T+EE SG + + + C VC G R
Sbjct: 106 FGFGGGSRHGPQ-----RGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPG 160
Query: 264 KIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
V+ C TC G+G QV+ G + V C DC+G+G+ +
Sbjct: 161 SEVKTCPTCGGTGQVKQVRNTILGQMMNVTT-CPDCQGEGKIV 202
Score = 46.7 bits (111), Expect = 3e-05
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPD--RDPKNEDK 80
YY++LGV E+KKAYR +ARKYHPD + E+K
Sbjct: 7 YYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEK 46
Score = 42.9 bits (101), Expect = 5e-04
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 314 GNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQ 373
G ++ I L EA G ++ IK + G R V+ C TC G+G Q
Sbjct: 119 GADIYTEVEITLEEAASGVEKDIK-VRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQ 177
Query: 374 VQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
V+ G + V C DC+G+G+ + + C C GK
Sbjct: 178 VRNTILGQMMNVTT-CPDCQGEGKIV--EKPCSNCHGK 212
Score = 32.1 bits (73), Expect = 1.2
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 85 RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
++G D+ + +T+EE SG + + + C VC G
Sbjct: 117 QRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNG 154
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional.
Length = 392
Score = 177 bits (450), Expect = 1e-48
Identities = 101/317 (31%), Positives = 145/317 (45%), Gaps = 46/317 (14%)
Query: 425 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE---GEKFKQISMAYEVLSNPEK 481
E FY LGV + + +E+KKAYRKLA + HPD NP + E+FK +S A++VLS+P K
Sbjct: 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAK 67
Query: 482 RELYDQ-------GGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEA------I 528
R+ YD+ GG+ G R G G FGG A +
Sbjct: 68 RKEYDETRRLFAGGGFGGRRFDG----------------GGGFGGFGTGGDGAEFNLNDL 111
Query: 529 KEGGSGGGGGGFSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKL 588
+ GGGGG D+F G R R R+G D+ + T+ + +G L
Sbjct: 112 FDAAGRGGGGGIG---DLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPL 168
Query: 589 QLEKNVICDKCEGRGGKKGAAES-CPGCRGTGMTVTVQ-QFGPGMIQQIQTVCSECRGQG 646
+L C C G G + G + CP C G+G+ Q FG C++CRG G
Sbjct: 169 RLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFG------FSEPCTDCRGTG 222
Query: 647 SRINPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIIIVL 705
S I D C+ C G + + V I G+ D Q+I G+G+ G GD+ + +
Sbjct: 223 SIIE--DPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTV 280
Query: 706 EEKPHPVFKRSGNNLII 722
+P VF R G++L +
Sbjct: 281 HVRPDKVFGRDGDDLTV 297
Score = 55.9 bits (135), Expect = 5e-08
Identities = 48/188 (25%), Positives = 70/188 (37%), Gaps = 60/188 (31%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQ----------GGEEAINQGGFGG-------------- 209
+FK +++A+DVLS+P KR+ YD+ GG GGFGG
Sbjct: 51 RFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFNLND 110
Query: 210 --------------------YHRRGQQQQKNR--KGKDVVHTLYVTMEELYSGAVRKLAL 247
++R G + +R +G D+ + E G L L
Sbjct: 111 LFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRL 170
Query: 248 EKNVICSVCEGRGGKSKIVEK-CSTCKGSGMTVQVQQI-----------GPGMIQQVQHV 295
C+ C G G + K C TC GSG+ + Q G G I ++
Sbjct: 171 TSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSI--IEDP 228
Query: 296 CSDCKGQG 303
C +CKG G
Sbjct: 229 CEECKGTG 236
Score = 48.6 bits (116), Expect = 1e-05
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKN---EDKQQKNRKGKDVV 91
+Y LGV S +E+KKAYR +AR+ HPD +P + E++ + + DV+
Sbjct: 11 FYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVL 62
Score = 31.6 bits (72), Expect = 1.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 350 GGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCA 409
G R G S V C TC GSG+ + Q G + C+DC+G G I D C C
Sbjct: 183 GARPGTSPKV--CPTCNGSGVISR-NQGAFGFSEP----CTDCRGTGSIIE--DPCEECK 233
Query: 410 G 410
G
Sbjct: 234 G 234
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional.
Length = 389
Score = 175 bits (445), Expect = 4e-48
Identities = 127/388 (32%), Positives = 180/388 (46%), Gaps = 34/388 (8%)
Query: 425 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKN---PNEGEKFKQISMAYEVLSNPEK 481
E +Y +LGV + T+ E+KKAYRKLA +YHPD N E+FK+IS AY+VLS+ +K
Sbjct: 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67
Query: 482 RELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAK-GEAIKEGGSGGGGGGF 540
R+ YD+ R L NG R G GG G+ G GGGG G
Sbjct: 68 RKEYDEA------------RSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGG 115
Query: 541 SSPM-DIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKC 599
+ D+F GGRR + R+G DV ++T+S + G L+L C C
Sbjct: 116 GGGLGDVFGGLFNR---GGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPAC 172
Query: 600 EGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTC 658
G G K G CP C GTG G + C +C+G+G + D C C
Sbjct: 173 SGTGAKNGTTPRVCPTCSGTGQVSRNSG---GF--SLSEPCPDCKGRGLIAD--DPCLVC 225
Query: 659 NGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSG 717
G + + ++V I G+ D Q+I G+G E G GD+ +V+ PHPVF RSG
Sbjct: 226 KGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSG 285
Query: 718 NNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDP 777
+NL + + EA G + TL + + PG + + V G+G KD
Sbjct: 286 DNLTV-TVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGT--PNGRVLRVRGKGAVR-KDG 341
Query: 778 FEKGNLIIVFSVKFPDVIPVDKVPAIEA 805
+G+L++ V P + A+EA
Sbjct: 342 -TRGDLLVTVEVAVPKDLSGKAREALEA 368
Score = 65.3 bits (159), Expect = 5e-11
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 45/170 (26%)
Query: 174 QFKEINKAYDVLSNPEKRRVYD-----------------------------------QGG 198
+FKEI++AYDVLS+ +KR+ YD QGG
Sbjct: 51 RFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGG 110
Query: 199 EEAINQGG----FGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICS 254
A GG FGG RG ++ + R+G DV + ++ E GA L L C
Sbjct: 111 GGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCP 170
Query: 255 VCEGRGGKSKIVEK-CSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQG 303
C G G K+ + C TC G+G QV + G + C DCKG+G
Sbjct: 171 ACSGTGAKNGTTPRVCPTCSGTG---QVSRNSGGF--SLSEPCPDCKGRG 215
Score = 49.1 bits (117), Expect = 6e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDR---DPKNEDKQQKNRKGKDVV 91
YY +LGV ++ E+KKAYR +AR+YHPD D K E++ ++ + DV+
Sbjct: 11 YYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVL 62
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional.
Length = 365
Score = 173 bits (441), Expect = 8e-48
Identities = 125/383 (32%), Positives = 179/383 (46%), Gaps = 66/383 (17%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG----EKFKQISMAYEVLSNPEKRE 483
+Y ILGV N +Q+++KKA+R+LA K+HPD +P EKFK+IS AYEVLS+P+KR
Sbjct: 5 YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRR 64
Query: 484 LYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGF--- 540
YDQ G FG GGS F
Sbjct: 65 QYDQTGTV------------------------DFGA-----------GGSNFNWDNFTHF 89
Query: 541 SSPMDIFEMFMGGSLG-------GGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKN 593
S DIF GG+ G G ++ D+ L +SLED Y GT K+++ +N
Sbjct: 90 SDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRN 149
Query: 594 VICDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQ-TVCSECRGQGSRINPK 652
+C C G G K G +CP C GTG V+ G G + + T C C G+G RI P+
Sbjct: 150 AMCPDCSGTGAKNGKLITCPTCHGTGQQRIVR--GQGFFRMVTVTTCRTCGGRG-RI-PE 205
Query: 653 DRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPV 712
++C CNG TV + + V I KG D ++ G+G G GD+ +VL P
Sbjct: 206 EKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQSYGGRT-GDLYVVLRVNNDPN 264
Query: 713 FKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDR---DIIISAAPGEVMKHSDIKMVVGE 769
+R ++L + +I +A G IK ++ I PGEV+K + G
Sbjct: 265 IQRINDDLYVD-QKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLK------IKGA 317
Query: 770 GMPTYKDPFEKGNLIIVFSVKFP 792
GMP + + G+L++ +V+ P
Sbjct: 318 GMP-HLNGHGSGDLLVRINVEVP 339
Score = 81.1 bits (200), Expect = 3e-16
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGG--------------------------- 206
+FKEI++AY+VLS+P+KRR YDQ G GG
Sbjct: 46 KFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNWDNFTHFSDINDIFNQIFGGNFG 105
Query: 207 ---FGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKS 263
F G+ G QQ D+ L +++E+ Y G +++ +N +C C G G K+
Sbjct: 106 SDFFSGF---GNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKN 162
Query: 264 KIVEKCSTCKGSGMTVQVQQIGPGMIQQVQ-HVCSDCKGQG 303
+ C TC G+G V+ G G + V C C G+G
Sbjct: 163 GKLITCPTCHGTGQQRIVR--GQGFFRMVTVTTCRTCGGRG 201
Score = 50.7 bits (121), Expect = 2e-06
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDV 90
YY +LGV S +++KKA+R +A+K+HPD P N K + K K++
Sbjct: 5 YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN--KAEAEEKFKEI 50
Score = 39.1 bits (91), Expect = 0.008
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 308 PKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKG 367
+ + ++ +I L +A G ++ IK R M G G K+ + C TC G
Sbjct: 116 QSTRNIDLDIYTNLDISLEDAYYGTEKRIKYR--RNAMCPDCSGTGAKNGKLITCPTCHG 173
Query: 368 SGMTVQVQQIGPGMIQQVQ-HVCSDCKGQGERINPKDKCRTCAG 410
+G V+ G G + V C C G+G RI P++KC C G
Sbjct: 174 TGQQRIVR--GQGFFRMVTVTTCRTCGGRG-RI-PEEKCPRCNG 213
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional.
Length = 372
Score = 173 bits (440), Expect = 1e-47
Identities = 128/391 (32%), Positives = 189/391 (48%), Gaps = 66/391 (16%)
Query: 423 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG---EKFKQISMAYEVLSNP 479
+ E ++YDILGV + +E+K AYRKLA+KYHPDKN EKFK+ + AYE+L +P
Sbjct: 1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDP 60
Query: 480 EKRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGG 539
+KR+ YDQ G G G+GG G G
Sbjct: 61 KKRQAYDQFGKAG------------------------------------VNAGAGGFGQG 84
Query: 540 --------FSSPMDIFEMFMGG----SLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKK 587
F DIF F GG GGGRR ++G D+ + L VSLED G K
Sbjct: 85 AYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYK 144
Query: 588 LQLEKNVICDKCEGRGGKKGAAES-CPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQG 646
+++ + C C G G KG++ + CP C G+G Q F + T C CRG+G
Sbjct: 145 IEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFF-----SVATTCPTCRGKG 199
Query: 647 SRI-NPKDRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIIIV 704
+ I NP CKTC G+ R+ + + I G+ ++ +GEG+ P G HGD+ +V
Sbjct: 200 TVISNP---CKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVV 256
Query: 705 LEEKPHPVFKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIK 764
K H +F+R GN+LI+ +I+L +A+ G + T+D + + G + +
Sbjct: 257 THIKKHELFERQGNDLILVR-KISLAQAILGAEIEVPTIDGKKAKMKIPEG--TESGQVF 313
Query: 765 MVVGEGMPTYKDPFEKGNLIIVFSVKFPDVI 795
+ G GMP Y + KG+ ++ ++ P I
Sbjct: 314 RLKGHGMP-YLGAYGKGDQHVIVKIEIPKKI 343
Score = 54.6 bits (131), Expect = 9e-08
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 45/180 (25%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQG---------------------------- 205
+FKE +AY++L +P+KR+ YDQ G+ +N G
Sbjct: 46 KFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFG 105
Query: 206 -----GFGGYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRG 260
G GG R G Q +G D+ + L V++E+ G K+ + + C C G G
Sbjct: 106 GGRGGGSGGGRRSGPQ-----RGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSG 160
Query: 261 G-KSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI-NPKDKRVGNNLQ 318
K C C GSG + Q V C C+G+G I NP G LQ
Sbjct: 161 ASKGSSPTTCPDCGGSGQIRRTQGFF-----SVATTCPTCRGKGTVISNPCKTCGGQGLQ 215
Score = 53.5 bits (128), Expect = 2e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 40 DTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDVVHTL 94
+ +YYD+LGV +D+E+K AYR +A KYHPD++ N++ ++K ++ + L
Sbjct: 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEIL 57
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional.
Length = 391
Score = 172 bits (437), Expect = 6e-47
Identities = 122/379 (32%), Positives = 180/379 (47%), Gaps = 42/379 (11%)
Query: 426 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGE---KFKQISMAYEVLSNPEKR 482
+Y ILGV + +E+KKAYRKLA+KYHPDKNP + E +FK++S AYEVLS+ +KR
Sbjct: 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKR 60
Query: 483 ELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSS 542
E YD+ G G G FGG E G GG F
Sbjct: 61 ESYDRYGKDG---------PFAGAG--------GFGGAGMGNMEDALRTFMGAFGGEFGG 103
Query: 543 PMDIFEMFMGG------SLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVIC 596
FE GG GG R+ K V +T+S E+ +G K+L + C
Sbjct: 104 GGSFFEGLFGGLGEAFGMRGGPAGARQGASKKV--HITLSFEEAAKGVEKELLVSGYKSC 161
Query: 597 DKCEGRGG-KKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRC 655
D C G G + C C+G+G V + F + + C EC G+G I D C
Sbjct: 162 DACSGSGANSSQGIKVCDRCKGSGQVVQSRGFF-----SMASTCPECGGEGRVIT--DPC 214
Query: 656 KTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIIIVLEEKPHPVFK 714
C G+ ++D++ + VHI G+ ++ G GD G GD+ + ++ +PHPVF+
Sbjct: 215 SVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFE 274
Query: 715 RSGNNLIIRPYEIALVEALCGFRRPIKTL-DDRDIIISAAPGEVMKHSDIKMVVGEGMPT 773
R G++LI+ I V+A G ++ I TL + ++ G ++ I V G+G P
Sbjct: 275 RRGDDLILE-LPIGFVDAALGMKKEIPTLLKEGTCRLTIPEG--IQSGTILKVRGQGFPN 331
Query: 774 YKDPFEKGNLIIVFSVKFP 792
+G+L++ SV+ P
Sbjct: 332 VHGK-GRGDLLVRISVETP 349
Score = 64.9 bits (158), Expect = 6e-11
Identities = 53/191 (27%), Positives = 77/191 (40%), Gaps = 58/191 (30%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAI--NQGGFGG---------------------- 209
+FKE+++AY+VLS+ +KR YD+ G++ GGFGG
Sbjct: 43 RFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFG 102
Query: 210 ----------------YHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVIC 253
+ RG + VH + ++ EE G ++L + C
Sbjct: 103 GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVH-ITLSFEEAAKGVEKELLVSGYKSC 161
Query: 254 SVCEGRGGKSKI-VEKCSTCKGSGMTVQVQQI-----------GPGMIQQVQHVCSDCKG 301
C G G S ++ C CKGSG VQ + G G + + CS C+G
Sbjct: 162 DACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV--ITDPCSVCRG 219
Query: 302 QGERINPKDKR 312
QG RI KDKR
Sbjct: 220 QG-RI--KDKR 227
Score = 52.9 bits (127), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
YY +LGV S +E+KKAYR +A KYHPD++P + + +++
Sbjct: 3 YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKR 43
Score = 36.0 bits (83), Expect = 0.075
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 303 GERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKC 362
G R P R G + ++ + EA G ++ + + G G S+ ++ C
Sbjct: 120 GMRGGPAGARQGASKKVHITLSFEEAAKGVEKEL-LVSGYKSCDACSGSGANSSQGIKVC 178
Query: 363 STCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
CKGSG VQ + G C +C G+G I D C C G+
Sbjct: 179 DRCKGSGQVVQSR----GFFSMAS-TCPECGGEGRVIT--DPCSVCRGQ 220
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional.
Length = 374
Score = 171 bits (436), Expect = 6e-47
Identities = 121/382 (31%), Positives = 180/382 (47%), Gaps = 66/382 (17%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPD--KNPNEGEKFKQISMAYEVLSNPEKRELY 485
+Y+ILGV + +DELK+AYR+LA KYHPD K P ++FK+I+ AYEVLS+PE R Y
Sbjct: 5 YYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARY 64
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSG----GGGGGFS 541
DQ FG EA G +G G GGF+
Sbjct: 65 DQ-----------------------------FG-------EAGVSGAAGFPDMGDMGGFA 88
Query: 542 SPMDIFEMFM---GGSLGGGRRRRER---KGKDVVHQLTVSLEDLYRGTVKKLQLEKNVI 595
DIFE F GG+ G G RRR R +G D+ + L + + G K++++
Sbjct: 89 ---DIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLET 145
Query: 596 CDKCEGRGGKKG-AAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDR 654
C+ C G G K G +C C G G + G Q+ + C C G G I +D
Sbjct: 146 CETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQV-SECPTCNGTGQVI--EDP 202
Query: 655 CKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIIIVLEEKPHPVF 713
C C G+ + K L+++I G+ ++ +GEGD G GD+ + L K P F
Sbjct: 203 CDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEF 262
Query: 714 KRSGNNLIIRPYEIALVEALCGFRRPIKTLD-DRDIIISAA--PGEVMKHSDIKMVVGEG 770
+R G N I+ +I+ ++A+ G + T+D ++ I A P V+ + +G
Sbjct: 263 RRDGIN-ILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVL------TLENKG 315
Query: 771 MPTYKDPFEKGNLIIVFSVKFP 792
+P +P +G+ +I VK P
Sbjct: 316 VPRLGNPVARGDHLITVKVKIP 337
Score = 72.3 bits (178), Expect = 2e-13
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQG---------------------GFGGYHR 212
+FKEIN+AY+VLS+PE R YDQ GE ++ GFGG
Sbjct: 44 RFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDMGDMGGFADIFETFFSGFGGAGG 103
Query: 213 RGQQQQKN--RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKI-VEKC 269
+G ++++ ++G D+ + L + E G +++ + C C G G K C
Sbjct: 104 QGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTC 163
Query: 270 STCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPK 309
STC G+G + + G QV C C G G+ I
Sbjct: 164 STCGGAGQVRRATRTPFGSFTQVS-ECPTCNGTGQVIEDP 202
Score = 56.9 bits (138), Expect = 2e-08
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPD--RDPKNEDK 80
YY++LGV DELK+AYR +ARKYHPD ++P ED+
Sbjct: 5 YYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDR 44
Score = 43.1 bits (102), Expect = 5e-04
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKI-V 359
GQG R + + G++L+ +D EA+ G ++ I+ + E G G K
Sbjct: 103 GQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRI--PHLETCETCRGSGAKPGTGP 160
Query: 360 EKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
CSTC G+G + + G QV C C G G+ I +D C C G+
Sbjct: 161 TTCSTCGGAGQVRRATRTPFGSFTQVS-ECPTCNGTGQVI--EDPCDACGGQ 209
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional.
Length = 371
Score = 171 bits (434), Expect = 9e-47
Identities = 123/386 (31%), Positives = 187/386 (48%), Gaps = 53/386 (13%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--EKFKQISMAYEVLSNPEKRELY 485
+Y++LGV + DE+K AYRKLALKYHPD+N +G EKF QI+ AY VLS+ EKR Y
Sbjct: 4 YYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHY 63
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMD 545
D+ G G A GG GG GF PMD
Sbjct: 64 DRFGTAPG---------------------------------AGMPGGDPFGGMGF-DPMD 89
Query: 546 IFEMFMGGSLGGGR--RRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGRG 603
IFE GG+ GG RR +G D+ + ++LE G ++++++ C+ C G
Sbjct: 90 IFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSR 149
Query: 604 GKKGAA--ESCPGCRGTGMTVTVQQ--FGPGMIQQIQTVCSECRGQGSRINPKDRCKTCN 659
+ G ++CP CRG G + FG + + Q C CRG+G I D C C
Sbjct: 150 TEPGGKPPKTCPTCRGAGAVRAQARTIFG---VVETQQPCPTCRGEGQII--TDPCTVCR 204
Query: 660 GKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGNN 719
G+ + ++V + +G+ + +I G G++ PG +GD+ + +E +PHP +R +
Sbjct: 205 GRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPG-GNGDLYVHIEMEPHPELRREQEH 263
Query: 720 LIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFE 779
LI I +A G + + TLD +I PG +H D+ + G+GMP +
Sbjct: 264 LIY-EARIGFAKAALGGQITVPTLDGPQ-VIEVKPG--TQHGDLHRLRGQGMPRLQGA-G 318
Query: 780 KGNLIIVFSVKFPDVIPVDKVPAIEA 805
G+LI+ + + P + + A+EA
Sbjct: 319 TGDLIVEYEIAVPKQLSPEAREALEA 344
Score = 64.5 bits (157), Expect = 6e-11
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 37/162 (22%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGG------------------------EEAINQGGF-G 208
+F +IN+AY VLS+ EKR YD+ G E+ GF G
Sbjct: 43 KFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFGGMGFDPMDIFEQLFGGAGFGG 102
Query: 209 GYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGR----GGKSK 264
G RRG + G D+ +T+E+ +G ++ +++ C C G GGK
Sbjct: 103 GRGRRGPAR-----GDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPP 157
Query: 265 IVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
C TC+G+G V+ Q + + Q C C+G+G+ I
Sbjct: 158 KT--CPTCRGAG-AVRAQARTIFGVVETQQPCPTCRGEGQII 196
Score = 48.0 bits (114), Expect = 1e-05
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDP 75
YY+LLGV S DE+K AYR +A KYHPDR+
Sbjct: 4 YYELLGVSRTASADEIKSAYRKLALKYHPDRNK 36
Score = 37.2 bits (86), Expect = 0.030
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 349 PGGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTC 408
PGG+ K+ C TC+G+G V+ Q + + Q C C+G+G+ I D C C
Sbjct: 152 PGGKPPKT-----CPTCRGAG-AVRAQARTIFGVVETQQPCPTCRGEGQII--TDPCTVC 203
Query: 409 AGK 411
G+
Sbjct: 204 RGR 206
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional.
Length = 369
Score = 166 bits (423), Expect = 2e-45
Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 56/381 (14%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG----EKFKQISMAYEVLSNPEKRE 483
+Y+ILGV N TQ+E+K+AY++L ++HPD++P +KFK+I AYEVLS+P+KR
Sbjct: 6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA 65
Query: 484 LYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSP 543
+YD+ GY G E + GGG F
Sbjct: 66 MYDRFGYVG---------------------------------EQPPYQETESGGGFFEDI 92
Query: 544 M---------DIFEMFMGGSLGGGRRRR-ERKGKDVVHQLTVSLEDLYRGTVKKLQLEKN 593
DIF++F G +R R+G+D+ +++ V+L DL G ++ ++
Sbjct: 93 FKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRY 152
Query: 594 VICDKCEGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPK 652
C C G G + G+ +CP C GTG ++ G+ + C C G G P
Sbjct: 153 ETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVS-ERTCERCGGTGKI--PG 209
Query: 653 DRCKTCNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQE-PGLEHGDIIIVLEEKPHP 711
+ C C G +R R V I G+ D + G G+ G +GD+ +++ +P P
Sbjct: 210 EYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDP 269
Query: 712 VFKRSGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGM 771
FKRSG++LI I ++A+ G + + ++ PG + + + G+G+
Sbjct: 270 RFKRSGSDLIYD-VTIDYLQAILGTTVEVPLPEGGTTMLKIPPG--TQPETVFRLKGKGL 326
Query: 772 PTYKDPFEKGNLIIVFSVKFP 792
P + +G+LI+ V+ P
Sbjct: 327 PNMRYG-RRGDLIVNVHVEIP 346
Score = 59.8 bits (145), Expect = 2e-09
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 33/161 (20%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQ----GGEEAINQGGFGGY------------------- 210
+FKEI +AY+VLS+P+KR +YD+ G + + GG
Sbjct: 47 KFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFNRDIFD 106
Query: 211 ----HRRGQQQQKN--RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGK-- 262
RR Q++Q+ R+G+D+ + + VT+ +L +GA + ++ C C G G +
Sbjct: 107 IFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPG 166
Query: 263 SKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQG 303
S V C C G+G + ++ G+ + C C G G
Sbjct: 167 SGYV-TCPKCHGTGRIREERRSFFGVFVS-ERTCERCGGTG 205
Score = 47.9 bits (114), Expect = 1e-05
Identities = 19/55 (34%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Query: 36 KTSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDV 90
+ KD YY++LGV + +E+K+AY+ + +++HPDR P E++++ +K K++
Sbjct: 1 REKKD--YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHP--ENRKEAEQKFKEI 51
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional.
Length = 371
Score = 157 bits (399), Expect = 4e-42
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 46/299 (15%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPD--KNPNEGEKFKQISMAYEVLSNPEKRELY 485
+Y++LGV N + DE+KKAYRKLA KYHPD K P+ +KFK++ AY+ LS+P+K+ Y
Sbjct: 6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHY 65
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMD 545
DQ G+ PN +G GGG G F D
Sbjct: 66 DQFGHTD------------PN-----------------------QGFGGGGAGDFGGFSD 90
Query: 546 IFEMFMGGSLGGGRRRRE--RKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEGRG 603
IF+MF GG GGGRR R+G D+ + +T+ ++ G ++++ + C C G G
Sbjct: 91 IFDMFFGG--GGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSG 148
Query: 604 GKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGKK 662
K G E+C C G+G + V+Q P + VC C G G I K +C TC GK
Sbjct: 149 AKPGTKPETCSHCGGSGQ-LNVEQNTPFGRVVNRRVCHHCEGTGKII--KQKCATCGGKG 205
Query: 663 TVRDRKILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSGNNL 720
VR RK + V + G+ Q++ +G+G+ G GD+ +V KPH F+R G+++
Sbjct: 206 KVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDI 264
Score = 63.5 bits (154), Expect = 1e-10
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQ-------GGFGGYHR--------RGQQQQ 218
+FKE+ +AYD LS+P+K+ YDQ G NQ G FGG+ G ++
Sbjct: 45 KFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGGGGRRN 104
Query: 219 KN--RKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIV-EKCSTCKGS 275
N R+G D+ +T+ + +E G ++ + + C C G G K E CS C GS
Sbjct: 105 PNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGS 164
Query: 276 GMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPK 309
G + V+Q P + VC C+G G+ I K
Sbjct: 165 GQ-LNVEQNTPFGRVVNRRVCHHCEGTGKIIKQK 197
Score = 49.2 bits (117), Expect = 5e-06
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDVVHTL 94
YY++LGV S DE+KKAYR +ARKYHPD + K D + K ++ K+ TL
Sbjct: 6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVN-KAPDAEDKFKEVKEAYDTL 56
Score = 47.7 bits (113), Expect = 2e-05
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 301 GQGERINPKDKRVGNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIV- 359
G G R NP R G +LQ T ++ EA+ G + I+ R G G K
Sbjct: 98 GGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEI--PREETCGTCHGSGAKPGTKP 155
Query: 360 EKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
E CS C GSG + V+Q P + VC C+G G+ I K KC TC GK
Sbjct: 156 ETCSHCGGSGQ-LNVEQNTPFGRVVNRRVCHHCEGTGKII--KQKCATCGGK 204
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional.
Length = 372
Score = 156 bits (395), Expect = 1e-41
Identities = 113/377 (29%), Positives = 184/377 (48%), Gaps = 40/377 (10%)
Query: 423 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPD--KNPNEGEKFKQISMAYEVLSNPE 480
+K+ +Y++LGV ++ E+++AYRKLA +YHPD K+P+ +K +I+ A +VL + +
Sbjct: 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKD 60
Query: 481 KRELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRS--AAKGEAIKEGGSGGGGG 538
KR+ YDQ G+ F G S ++ ++ S G
Sbjct: 61 KRKQYDQFGHAA------------------------FDGSSGFSSNFGDFEDLFSNMGSS 96
Query: 539 GFSSPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDK 598
GFSS +IF F G +R KG+ V + ++ ++L G K ++L+ C K
Sbjct: 97 GFSSFTNIFSDFFGS--NKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSK 154
Query: 599 CEGRGGKKGAAES-CPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKT 657
C G G + + C C GTG + + G QQ C+ C G G I K++CK
Sbjct: 155 CFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQ-SAKCNVCNGAGKII--KNKCKN 211
Query: 658 CNGKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQ--EPGLEHGDIIIVLEEKPHPVFKR 715
C GK +RK +EV+I KG+ Q+I + +G G+ +GD+II + K VF+
Sbjct: 212 CKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGV-NGDLIIDIYLKESKVFEI 270
Query: 716 SGNNLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYK 775
NN I+ Y I+ ++A+ G IKTLD I P + + I + +G+
Sbjct: 271 INNNDILMTYNISYLDAILGNEIIIKTLDGD--IKYKLPKSINSNELII-INNKGLYKSI 327
Query: 776 DPFEKGNLIIVFSVKFP 792
+ ++G+LII ++ P
Sbjct: 328 NKDKRGDLIIKVNIVVP 344
Score = 68.8 bits (168), Expect = 3e-12
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 48/204 (23%)
Query: 147 STEEETAQVYGSSLFDHIEILIPRFYP----------QFKEINKAYDVLSNPEKRRVYDQ 196
++E+E Q Y L +++P + EIN+A DVL + +KR+ YDQ
Sbjct: 16 ASEQEIRQAYRK--------LAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQ 67
Query: 197 GGEEAIN-----QGGFGGYH-----------------------RRGQQQQKNRKGKDVVH 228
G A + FG + Q++ KG+ V
Sbjct: 68 FGHAAFDGSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSL 127
Query: 229 TLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKI-VEKCSTCKGSGMTVQVQQIGPG 287
+Y+T +EL G + + L+ CS C G G +S + C+ C G+G + + +G
Sbjct: 128 DIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFF 187
Query: 288 MIQQVQHVCSDCKGQGERINPKDK 311
QQ C+ C G G+ I K K
Sbjct: 188 QFQQ-SAKCNVCNGAGKIIKNKCK 210
Score = 46.5 bits (110), Expect = 4e-05
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPD--RDPKNEDKQQKNRKGKDVV 91
YY++LGV S+ E+++AYR +A++YHPD + P DK + + DV+
Sbjct: 6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVL 56
Score = 40.7 bits (95), Expect = 0.003
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 359 VEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGK 411
+ C+ C G+G + + +G QQ C+ C G G+ I K+KC+ C GK
Sbjct: 166 IHICNNCHGTGEVLVQKNMGFFQFQQ-SAKCNVCNGAGKII--KNKCKNCKGK 215
Score = 30.7 bits (69), Expect = 3.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 77 NEDKQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEG 122
N+ Q++ KG+ V +Y+T +EL G + + L+ CS C G
Sbjct: 112 NKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFG 157
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional.
Length = 372
Score = 140 bits (353), Expect = 5e-36
Identities = 100/302 (33%), Positives = 143/302 (47%), Gaps = 48/302 (15%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDK-NPNEGEK-FKQISMAYEVLSNPEKRELY 485
+Y ILGV +Q +LKKAY KLA +YHPD + + EK FK+I+ AY+VL + +KR Y
Sbjct: 5 YYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAY 64
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPM- 544
D+ G+ + R G GG GGF +
Sbjct: 65 DRFGHDAFQNQQSR--------------------------------GGGGNHGGFHPDIN 92
Query: 545 DIFEMFMGGSLGGGRRRRER----KGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCE 600
DIF F +GG RR R +G D+ + LT++LE+ + G K + V CD C
Sbjct: 93 DIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCH 152
Query: 601 GRGGKKG-AAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCN 659
G G +KG +C C G G T Q F I+ C +C+G G I K+ CK C+
Sbjct: 153 GSGSEKGETVTTCDACSGVGATRMQQGFF-----TIEQACHKCQGNGQII--KNPCKKCH 205
Query: 660 GKKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQE-PGLEHGDIIIVLEEKPHPVFKRSGN 718
G ++ L V+I G+ + +I GEG+ G GD+ + + KPH ++K G
Sbjct: 206 GMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGA 265
Query: 719 NL 720
NL
Sbjct: 266 NL 267
Score = 74.7 bits (183), Expect = 4e-14
Identities = 54/165 (32%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAI----------NQGGFG--------------- 208
+FKEIN AYDVL + +KR YD+ G +A N GGF
Sbjct: 44 KFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFM 103
Query: 209 GYHRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGG-KSKIVE 267
G RR + +G D+ + L + +EE + G + ++ V C C G G K + V
Sbjct: 104 GGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVT 163
Query: 268 KCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI-NPKDK 311
C C G G T ++QQ G I+Q C C+G G+ I NP K
Sbjct: 164 TCDACSGVGAT-RMQQ-GFFTIEQ---ACHKCQGNGQIIKNPCKK 203
Score = 39.2 bits (91), Expect = 0.007
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDR-DPKNEDKQQK 83
YY +LGV S +LKKAY +A++YHPD D K+ +K+ K
Sbjct: 5 YYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFK 46
Score = 35.4 bits (81), Expect = 0.11
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 297 SDCKGQGERINPKDKRV-GNNLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGK 355
SD G R P +V G++L+ I+L EA G ++ I + V
Sbjct: 100 SDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNI-SFSSEV------------ 146
Query: 356 SKIVEKCSTCKGSGM----TVQV----QQIGPGMIQQ----VQHVCSDCKGQGERINPKD 403
KC TC GSG TV +G +QQ ++ C C+G G+ I K+
Sbjct: 147 -----KCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII--KN 199
Query: 404 KCRTCAG 410
C+ C G
Sbjct: 200 PCKKCHG 206
>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and
HSP40. The C-terminal region of the DnaJ/Hsp40 protein
mediates oligomerization and binding to denatured
polypeptide substrate. DnaJ/Hsp40 is a widely conserved
heat-shock protein. It prevents the aggregation of
unfolded substrate and forms a ternary complex with both
substrate and DnaK/Hsp70; the N-terminal J-domain of
DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.
Length = 158
Score = 128 bits (324), Expect = 2e-34
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 661 KKTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEP-GLEHGDIIIVLEEKPHPVFKRSGNN 719
VR++K L V I G+ D Q++ GEGD P G GD+ +V+ KPHPVF+R GN+
Sbjct: 28 VTRVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGND 87
Query: 720 LIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPFE 779
L I+L EAL G + T + + PG + + + G+GMP +
Sbjct: 88 LYCE-VPISLTEALLGGEIEVPT-LGGKVKLKIPPGT--QPGTVLRLKGKGMPRLR-GGG 142
Query: 780 KGNLIIVFSVKFPD 793
+G+L + V+FP
Sbjct: 143 RGDLYVEVKVEFPK 156
Score = 56.3 bits (137), Expect = 3e-09
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 43/146 (29%)
Query: 224 KDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVEKCSTCKGSGMTVQVQQ 283
D+ + L +T+EE Y G +++ + + V ++ EK T+ V+
Sbjct: 1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT-----------RVREK--------KTLTVK- 40
Query: 284 IGPGMIQ-QVQHVCSDCKGQGE-------------RINPKD----KRVGNNLQMTQNIDL 325
I G+ Q + +G+G+ I K +R GN+L I L
Sbjct: 41 IPAGVDDGQRLRL----RGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISL 96
Query: 326 VEALCGFQRYIKTLDGRVIMIEVPGG 351
EAL G + + TL G+V +++P G
Sbjct: 97 TEALLGGEIEVPTLGGKV-KLKIPPG 121
Score = 39.3 bits (93), Expect = 0.002
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 567 KDVVHQLTVSLEDLYRGTVKKLQLEKNVI 595
D+ + L ++LE+ Y G K++++ + V
Sbjct: 1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT 29
Score = 33.9 bits (79), Expect = 0.13
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 88 KDVVHTLYVTMEELYSGAVRKLALEKNVI 116
D+ + L +T+EE Y G +++ + + V
Sbjct: 1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT 29
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain. DnaJ domains (J-domains) are
associated with hsp70 heat-shock system and it is
thought that this domain mediates the interaction.
DnaJ-domain is therefore part of a chaperone (protein
folding) system. The T-antigens, although not in Prosite
are confirmed as DnaJ containing domains from
literature.
Length = 63
Score = 117 bits (296), Expect = 8e-32
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Query: 427 TFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG---EKFKQISMAYEVLSNPEKRE 483
+Y+ILGV + + +E+KKAYRKLALKYHPDKNP + EKFK+I+ AYEVLS+PEKR
Sbjct: 1 DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60
Query: 484 LYD 486
+YD
Sbjct: 61 IYD 63
Score = 71.4 bits (176), Expect = 2e-15
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRK 86
YY++LGV SD+E+KKAYR +A KYHPD++P + ++K ++
Sbjct: 2 YYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKE 45
Score = 47.9 bits (115), Expect = 2e-07
Identities = 16/22 (72%), Positives = 21/22 (95%)
Query: 174 QFKEINKAYDVLSNPEKRRVYD 195
+FKEIN+AY+VLS+PEKR +YD
Sbjct: 42 KFKEINEAYEVLSDPEKRAIYD 63
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional.
Length = 369
Score = 125 bits (316), Expect = 3e-31
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 43/302 (14%)
Query: 425 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGE---KFKQISMAYEVLSNPEK 481
E ++Y+IL V+ + Q+ +KK+YRKLALKYHPD+N + E KFK I+ AY VLS+ +K
Sbjct: 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKK 61
Query: 482 RELYDQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFS 541
R LYD+ G +G Q G + + ++ GS
Sbjct: 62 RALYDRYGKKGLN---------------------QAGASQSDFSDFFEDLGS-------- 92
Query: 542 SPMDIFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQLEKNVICDKCEG 601
FE G G +R++ D + + +S ++ G K ++++ +C+ C+G
Sbjct: 93 ----FFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDG 148
Query: 602 RGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDRCKTCNGK 661
G K A E+C C G G Q F C C+G+G I K C+ C GK
Sbjct: 149 TGAKDKALETCKQCNGQGQVFMRQGF-----MSFAQTCGACQGKGKII--KTPCQACKGK 201
Query: 662 KTVRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGNNLI 721
+ + ++ I +G+ DQ ++V +G++ + GD+ + K FKR G +L
Sbjct: 202 TYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLF 261
Query: 722 IR 723
I
Sbjct: 262 IE 263
Score = 74.7 bits (183), Expect = 4e-14
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 24/152 (15%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGGFG-------------------GYHRRG 214
+FK IN+AY VLS+ +KR +YD+ G++ +NQ G G+ RG
Sbjct: 45 KFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQSDFSDFFEDLGSFFEDAFGFGARG 104
Query: 215 QQQQKNRKGKDVVHTLYVTMEELYSGAVRKLALEKNVICSVCEGRGGKSKIVEKCSTCKG 274
++QK+ D + T+ ++ +E G + + ++ +C C+G G K K +E C C G
Sbjct: 105 SKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNG 164
Query: 275 SGMTVQVQQIGPGMIQQVQHVCSDCKGQGERI 306
G Q G + Q C C+G+G+ I
Sbjct: 165 QGQVFMRQ----GFMSFAQ-TCGACQGKGKII 191
Score = 40.8 bits (95), Expect = 0.003
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 40 DTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
+ +YY++L V+ + + +KK+YR +A KYHPDR+ +++ ++K
Sbjct: 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEK 45
Score = 39.7 bits (92), Expect = 0.005
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 317 LQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQVQQ 376
LQ + + EA+ G ++ IK V E G G K K +E C C G G Q
Sbjct: 117 LQTIE-LSFKEAVFGCKKTIKVQYQSVC--ESCDGTGAKDKALETCKQCNGQGQVFMRQ- 172
Query: 377 IGPGMIQQVQHVCSDCKGQGERINPKDKCRTCAGKKF 413
G + Q C C+G+G+ I K C+ C GK +
Sbjct: 173 ---GFMSFAQ-TCGACQGKGKII--KTPCQACKGKTY 203
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain.
Length = 60
Score = 100 bits (251), Expect = 8e-26
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 4/60 (6%)
Query: 426 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE----GEKFKQISMAYEVLSNPEK 481
T +Y+ILGV + + DE+KKAYRKLALKYHPDKNP + EKFK+I+ AYEVLS+PEK
Sbjct: 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
Score = 64.6 bits (158), Expect = 4e-13
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKN-EDKQQKNRK 86
YY++LGV S DE+KKAYR +A KYHPD++P + E+ ++K ++
Sbjct: 3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKE 47
Score = 36.4 bits (85), Expect = 0.003
Identities = 13/17 (76%), Positives = 17/17 (100%)
Query: 174 QFKEINKAYDVLSNPEK 190
+FKEIN+AY+VLS+PEK
Sbjct: 44 KFKEINEAYEVLSDPEK 60
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play
crucial roles in protein translation, folding,
unfolding, translocation, and degradation. They act
primarily by stimulating the ATPase activity of Hsp70s,
an important chaperonine family. Hsp40 proteins are
characterized by the presence of a J domain, which
mediates the interaction with Hsp70. They may contain
other domains as well, and the architectures provide a
means of classification.
Length = 55
Score = 97.2 bits (243), Expect = 9e-25
Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Query: 427 TFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE---GEKFKQISMAYEVLSN 478
+YDILGV P+ + +E+KKAYRKLALKYHPDKNP++ EKFK+I+ AYEVLS+
Sbjct: 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
Score = 71.4 bits (176), Expect = 1e-15
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQKNRK 86
YYD+LGV P SD+E+KKAYR +A KYHPD++P + + ++K ++
Sbjct: 2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKE 45
Score = 31.4 bits (72), Expect = 0.16
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 174 QFKEINKAYDVLSN 187
+FKEIN+AY+VLS+
Sbjct: 42 KFKEINEAYEVLSD 55
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional.
Length = 291
Score = 98.5 bits (245), Expect = 2e-22
Identities = 68/179 (37%), Positives = 88/179 (49%), Gaps = 47/179 (26%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPD--KNPNEGEKFKQISMAYEVLSNPEKRELY 485
+Y ILGV N +QDE+KKA++KLA KYHPD K+P EKFK+I+ AY VLS+PEKR +Y
Sbjct: 6 YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIY 65
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGG------GG 539
D G GWQ G GGG G
Sbjct: 66 DTYGTTAASA------------------GWQ----------GPPPGPPGGGDFSGFNVGD 97
Query: 540 FSSPMDIFEMFMGG--------SLGGGRRRRERKGKDVVHQLTVSLEDLYRGTVKKLQL 590
FS D F+ GG L G RR RKG+D+ +L ++LE+ YRG K +++
Sbjct: 98 FS---DFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV 153
Score = 49.6 bits (118), Expect = 4e-06
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 35/109 (32%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAIN------------------------------ 203
+FKEIN+AY VLS+PEKRR+YD G A +
Sbjct: 45 KFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQ 104
Query: 204 ----QGGFGGYHRRGQQQ-QKNRKGKDVVHTLYVTMEELYSGAVRKLAL 247
+GGFGG+ ++ RKG+D+ L +T+EE Y G + + +
Sbjct: 105 LFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV 153
Score = 48.8 bits (116), Expect = 6e-06
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPD--RDPKNEDK 80
YY +LGV S DE+KKA++ +ARKYHPD + P E+K
Sbjct: 6 YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEK 45
Score = 31.1 bits (70), Expect = 2.4
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 660 GKKTVR-DRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGN 718
G+K V + L V I G+ + Q I G+G Q GD+ +V+ PHPVF+ G+
Sbjct: 147 GEKVVEVAGERLSVRIPPGVREGQVIRLAGKGRQ-----GGDLYLVVRLLPHPVFRLEGD 201
Query: 719 NLIIR---PYEIALV 730
+L P IA+V
Sbjct: 202 DLYATVDVPAPIAVV 216
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational
modification, protein turnover, chaperones].
Length = 237
Score = 89.9 bits (222), Expect = 5e-20
Identities = 60/208 (28%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 422 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG----EKFKQISMAYEVLS 477
M +Y+ILGV PN + +E+KKAYRKLALKYHPD+NP + EKFK+I+ AYE+LS
Sbjct: 2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILS 61
Query: 478 NPEKRELYDQGGYQG---GRLWGRRRRL------LLPNGYIRDVHGWQFGGRSAAKGEAI 528
+PE+R YD+ G G+ + L Y R A+ + +
Sbjct: 62 DPERRAEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLL 121
Query: 529 KEGGSGGGGGGFSSPMDIFEMFMGGSLGGGRRRRERKG------KDVVHQLTVSLEDLYR 582
G SG S GSL V + L +
Sbjct: 122 SRGLSGLAAAL--SLFADEAALRSGSLRRRDLAANLADNFEEALAGVKKAVARLLGKALK 179
Query: 583 GTVKKLQLEKNVICDKCEGRGGKKGAAE 610
T+K LE + K + + +
Sbjct: 180 STIKAGALEGKALRLKGLLKSARGALGK 207
Score = 51.4 bits (122), Expect = 6e-07
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 38 SKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNEDKQQK 83
S YY++LGV P S +E+KKAYR +A KYHPDR+P + ++
Sbjct: 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEE 48
Score = 40.2 bits (93), Expect = 0.002
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 143 LKFVSTEEETAQVYGS-SLFDHI---EILIPRFYPQFKEINKAYDVLSNPEKRRVYDQGG 198
+ ++ EE + Y +L H +FKEIN+AY++LS+PE+R YD+ G
Sbjct: 14 VPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73
Query: 199 EEAINQGGFGGYHRRGQQQ 217
+ G +
Sbjct: 74 ADNYFPGKSYRESAAFPIE 92
Score = 34.8 bits (79), Expect = 0.12
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 664 VRDRKILEVHIDKGMIDQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFKRSGNNLI 721
K L+ I G ++ + + G G G + K HP F G++
Sbjct: 172 RLLGKALKSTIKAGALEGKALRLKGLLKSARGAL-GKARLKELSKRHPPFALEGDDKY 228
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional.
Length = 306
Score = 86.4 bits (214), Expect = 2e-18
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 31/154 (20%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPD--KNPNEGEKFKQISMAYEVLSNPEKRELY 485
+Y I+GVKP +K AYR+LA KYHPD K P+ +FK+++ A+EVLS+ ++R Y
Sbjct: 6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEY 65
Query: 486 DQGGYQGGRLWGRRRRLLLPNGYIRDVHGWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMD 545
DQ LW R + R +Q G G F D
Sbjct: 66 DQ-------LWQHRN----DPQFNRQ---FQHG------------DGQSFNAEDFD---D 96
Query: 546 IFEMFMGGSLGGGRRRRERKGKDVVHQLTVSLED 579
IF G R+R +G D+ ++ V LE+
Sbjct: 97 IFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEE 130
Score = 47.1 bits (112), Expect = 2e-05
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 668 KILEVHIDKGMIDQQKIVFNGEGDQ-EPGLEHGDIIIVLEEKPHPVFKRSGNNL-IIRPY 725
K L V I G+ + Q+I G+G E G +GD+ +V+ PHP+F G +L I+ P
Sbjct: 158 KTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVP- 216
Query: 726 EIALVEALCGFRRPIKTLDDRDIIISAAPG 755
+A EA G + + TL + I+++ PG
Sbjct: 217 -LAPWEAALGAKVTVPTLKES-ILLTIPPG 244
Score = 46.0 bits (109), Expect = 4e-05
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPD--RDPKNEDK 80
YY ++GVKP +K AYR +ARKYHPD ++P E +
Sbjct: 6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEAR 45
Score = 38.6 bits (90), Expect = 0.011
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 23/96 (23%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQ----------------GGEEAINQGGFG-------GY 210
+FKE+ +A++VLS+ ++R YDQ G ++ N F G
Sbjct: 45 RFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSIFGQ 104
Query: 211 HRRGQQQQKNRKGKDVVHTLYVTMEELYSGAVRKLA 246
H R +Q+ +G D+ + V +EE + R ++
Sbjct: 105 HARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTIS 140
>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40.
Central/middle or CxxCxGxG-motif containing domain of
DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are
highly conserved and play crucial roles in protein
translation, folding, unfolding, translocation, and
degradation. They act primarily by stimulating the
ATPase activity of Hsp70s, an important chaperonin
family. Hsp40 proteins are characterized by the presence
of an N-terminal J domain, which mediates the
interaction with Hsp70. This central domain contains
four repeats of a CxxCxGxG motif and binds to two Zinc
ions. It has been implicated in substrate binding.
Length = 65
Score = 78.1 bits (193), Expect = 8e-18
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 596 CDKCEGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDR 654
C C G G K G ++CP C G+G VQ G Q QT C C G G I KD
Sbjct: 1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTG-FGFFQTQTTCPTCGGTGKII--KDP 57
Query: 655 CKTCNGKK 662
C C GK
Sbjct: 58 CPKCKGKG 65
Score = 66.5 bits (163), Expect = 9e-14
Identities = 26/64 (40%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 350 GGRGGKS-KIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTC 408
G G K + C TC GSG QVQ G Q Q C C G G+ I KD C C
Sbjct: 5 NGSGAKPGTKPKTCPTCGGSGQVRQVQGTG-FGFFQTQTTCPTCGGTGKII--KDPCPKC 61
Query: 409 AGKK 412
GK
Sbjct: 62 KGKG 65
Score = 63.4 bits (155), Expect = 1e-12
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 253 CSVCEGRGGKS-KIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPK 309
C C G G K + C TC GSG QVQ G Q Q C C G G+ I
Sbjct: 1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTG-FGFFQTQTTCPTCGGTGKIIKDP 57
Score = 32.6 bits (75), Expect = 0.074
Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 2/26 (7%)
Query: 251 VICSVCEGRGGKSKIVEKCSTCKGSG 276
C C G G I + C CKG G
Sbjct: 42 TTCPTCGGTG--KIIKDPCPKCKGKG 65
Score = 27.6 bits (62), Expect = 5.0
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 15/56 (26%)
Query: 341 GRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQG 396
G+V V G G + C TC G+G ++ C CKG+G
Sbjct: 25 GQVRQ--VQGTGFGFFQTQTTCPTCGGTGKI-------------IKDPCPKCKGKG 65
Score = 27.6 bits (62), Expect = 5.4
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 594 VICDKCEGRGGKKGAAESCPGCRGTG 619
C C G G K + CP C+G G
Sbjct: 42 TTCPTCGGTG--KIIKDPCPKCKGKG 65
Score = 26.8 bits (60), Expect = 8.5
Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 639 CSECRGQGSRI-NPKDRCKTCNGKKTVR 665
C C G G++ C TC G VR
Sbjct: 1 CPTCNGSGAKPGTKPKTCPTCGGSGQVR 28
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein
TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ
homolog and probable assembly protein of the Mycoplasma
terminal organelle. The terminal organelle is involved
in both cytadherence and gliding motility [Cellular
processes, Chemotaxis and motility].
Length = 871
Score = 85.3 bits (210), Expect = 7e-17
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 428 FYDILGVKPNCTQDELKKAYRKLALKYHPDKN--PNEGEKFKQISMAYEVLSNPEKRELY 485
+Y++LG+ + + E+KKA+RKLA KYHPD+N P+ F +I+ A +VLSNP+KR Y
Sbjct: 4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANY 63
Query: 486 DQGGYQG 492
D+ G+ G
Sbjct: 64 DKYGHDG 70
Score = 48.7 bits (115), Expect = 1e-05
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 43 YYDLLGVKPGCSDDELKKAYRTMARKYHPDRD 74
YY++LG+ + E+KKA+R +A+KYHPDR+
Sbjct: 4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN 35
Score = 45.6 bits (107), Expect = 1e-04
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 175 FKEINKAYDVLSNPEKRRVYDQGGEEAI-NQGGF 207
F EIN+A DVLSNP+KR YD+ G + + + F
Sbjct: 44 FAEINEANDVLSNPKKRANYDKYGHDGVDREDDF 77
>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain. The central
cysteine-rich (CR) domain of DnaJ proteins contains four
repeats of the motif CXXCXGXG where X is any amino acid.
The isolated cysteine rich domain folds in zinc
dependent fashion. Each set of two repeats binds one
unit of zinc. Although this domain has been implicated
in substrate binding, no evidence of specific
interaction between the isolated DNAJ cysteine rich
domain and various hydrophobic peptides has been found.
Length = 65
Score = 74.0 bits (182), Expect = 2e-16
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 596 CDKCEGRGGKKGAA-ESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRINPKDR 654
C C G G K G ++CP C G+G V Q+ PG + Q+Q C +C G G I KD
Sbjct: 1 CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQR-TPGGVFQMQQTCPKCGGTGKII--KDP 57
Query: 655 CKTCNGKK 662
CK C GK
Sbjct: 58 CKVCKGKG 65
Score = 61.2 bits (149), Expect = 5e-12
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 350 GGRGGKSKI-VEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKCRTC 408
G G K + C C GSG V+ Q+ PG + Q+Q C C G G+ I KD C+ C
Sbjct: 5 HGTGAKPGKKPKTCPQCNGSGQVVKRQR-TPGGVFQMQQTCPKCGGTGKII--KDPCKVC 61
Query: 409 AGKK 412
GK
Sbjct: 62 KGKG 65
Score = 60.1 bits (146), Expect = 1e-11
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 253 CSVCEGRGGKSKI-VEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPK 309
C C G G K + C C GSG V+ Q+ PG + Q+Q C C G G+ I
Sbjct: 1 CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQR-TPGGVFQMQQTCPKCGGTGKIIKDP 57
Score = 30.0 bits (68), Expect = 0.58
Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 2/26 (7%)
Query: 251 VICSVCEGRGGKSKIVEKCSTCKGSG 276
C C G G I + C CKG G
Sbjct: 42 QTCPKCGGTG--KIIKDPCKVCKGKG 65
>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain. This family consists of
the C terminal region form the DnaJ protein. Although
the function of this region is unknown, it is always
found associated with pfam00226 and pfam00684. DnaJ is a
chaperone associated with the Hsp70 heat-shock system
involved in protein folding and renaturation after
stress.
Length = 81
Score = 71.0 bits (175), Expect = 3e-15
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 719 NLIIRPYEIALVEALCGFRRPIKTLDDRDIIISAAPGEVMKHSDIKMVVGEGMPTYKDPF 778
+L + I+L EAL G + TLD R + I G + D + G+GMP K
Sbjct: 1 DLYVT-LPISLKEALLGGTVEVPTLDGRKVKIKIPAG--TQPGDKLRIKGKGMPINKGGN 57
Query: 779 EKGNLIIVFSVKFPD 793
+G+LI+ +VK P
Sbjct: 58 GRGDLIVTLNVKIPK 72
Score = 49.9 bits (120), Expect = 8e-08
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 316 NLQMTQNIDLVEALCGFQRYIKTLDGRVIMIEVPGG-RGGKSKIVEKCSTCKGSGM 370
+L +T I L EAL G + TLDGR + I++P G + G + KG GM
Sbjct: 1 DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRI------KGKGM 50
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen;
Provisional.
Length = 1136
Score = 62.5 bits (151), Expect = 7e-10
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 416 QAKRPNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDK-NPNEG-EKFKQISMAY 473
+A + +T FYDILGV N E+ + Y KLA Y+P K + NEG KFK+I+ AY
Sbjct: 563 EAAPTIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAY 622
Query: 474 EVLSNPEKRELYDQGGYQG 492
++L + +K+++Y++ GY G
Sbjct: 623 QILGDIDKKKMYNKFGYDG 641
Score = 33.6 bits (76), Expect = 0.57
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 174 QFKEINKAYDVLSNPEKRRVYDQGGEEAINQGGF 207
+FK+IN+AY +L + +K+++Y++ G + I F
Sbjct: 614 KFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNF 647
Score = 32.5 bits (73), Expect = 1.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 40 DTAYYDLLGVKPGCSDDELKKAYRTMARKYHPDRDPKNE 78
DT +YD+LGV E+ + Y +A Y+P + NE
Sbjct: 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNE 610
>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular
trafficking and secretion].
Length = 610
Score = 61.1 bits (148), Expect = 2e-09
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Query: 429 YDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG--------EKFKQISMAYEVLSNPE 480
Y+ILG+ + ++ ++KK YR L++K+HPDK P EK+K I+ AY +L++ +
Sbjct: 101 YEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK 160
Query: 481 KRELY 485
+RE Y
Sbjct: 161 RRENY 165
Score = 43.0 bits (101), Expect = 6e-04
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 44 YDLLGVKPGCSDDELKKAYRTMARKYHPDRDPK--NEDKQQKNRKGKDV 90
Y++LG+ S+ ++KK YR ++ K+HPD+ P NE + + K K +
Sbjct: 101 YEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTI 149
>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional.
Length = 267
Score = 52.5 bits (127), Expect = 2e-07
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 10/58 (17%)
Query: 429 YDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEG----------EKFKQISMAYEVL 476
Y +LGV + E+K+AYRKL ++HPDK +G EK ++I AYE++
Sbjct: 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI 260
Score = 49.8 bits (120), Expect = 2e-06
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 16 GGFDFGGFGGAQQGGAGGQRKTSKDTAYYDLLGVKPGCSDDELKKAYRTMARKYHPD 72
GF F G QR + + AY +LGV D E+K+AYR + ++HPD
Sbjct: 177 AGFRFQQ-QQGGGGYQQAQRGPTLEDAY-KVLGVSESDDDQEIKRAYRKLMSEHHPD 231
>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation,
ribosomal structure and biogenesis / Posttranslational
modification, protein turnover, chaperones].
Length = 379
Score = 47.7 bits (113), Expect = 2e-05
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 439 TQDELKKAYRKLALKYHPDKNPNEGEK-----FKQISMAYEVLSNPEKRELYD 486
++ KA++K KYHPDK G K FK I A EVL + + R YD
Sbjct: 59 IPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYD 111
Score = 31.9 bits (72), Expect = 1.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 175 FKEINKAYDVLSNPEKRRVYDQGGEEA 201
FK I KA +VL + + R YD +A
Sbjct: 91 FKLIQKAREVLGDRKLRLQYDSNDFDA 117
>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains
DnaJ-type Zn finger domain [DNA replication,
recombination, and repair].
Length = 715
Score = 42.8 bits (101), Expect = 8e-04
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 594 VICDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQ--------TVCSECRGQ 645
C +C G+G E CP C GTG + G + + C +CRG+
Sbjct: 3 KKCPECGGKGKIVVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGK 62
Query: 646 GSRINPKDRCKTCNGK 661
G+ + D C C G
Sbjct: 63 GT-VTVYDTCPECGGT 77
Score = 40.9 bits (96), Expect = 0.003
Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 244 KLALEKNVICSVCEGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQG 303
L + C C G G + + C C G+G + G ++ + +C +C+ +
Sbjct: 47 DLFASFEIPCPKCRG-KGTVTVYDTCPECGGTGKVLTCDICGDIIVPWEEGLCPECRRKP 105
Query: 304 E 304
+
Sbjct: 106 K 106
Score = 40.1 bits (94), Expect = 0.006
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 580 LYRGTVKKLQLEKNVICDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVC 639
L R TV L + C KC G G ++CP C GTG +T G ++ + +C
Sbjct: 41 LSRETVD-LFASFEIPCPKCRG-KGTVTVYDTCPECGGTGKVLTCDICGDIIVPWEEGLC 98
Query: 640 SECRGQG 646
ECR +
Sbjct: 99 PECRRKP 105
Score = 35.9 bits (83), Expect = 0.097
Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 29/133 (21%)
Query: 266 VEKCSTCKGSGMTVQVQQIGPGMIQQVQHVCSDCKGQGERINPKDKRVGNNLQMTQNIDL 325
++KC C G G V ++ C C G G + K V N + T ++
Sbjct: 2 IKKCPECGGKGKIVVGEEE-----------CPVCHGTGFSDDFDPKGVANLSRETVDLFA 50
Query: 326 -VEALCGFQRYIKTLDGRVIMIEVPGGRGGKSKIVEKCSTCKGSGMTVQVQQIGPGMIQQ 384
E C R G + + C C G+G + G ++
Sbjct: 51 SFEIPCPKCR-----------------GKGTVTVYDTCPECGGTGKVLTCDICGDIIVPW 93
Query: 385 VQHVCSDCKGQGE 397
+ +C +C+ + +
Sbjct: 94 EEGLCPECRRKPK 106
>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed.
Length = 153
Score = 40.4 bits (95), Expect = 0.001
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 430 DILGVKPNCTQDE--LKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVL 476
D+LG+ + + ++KAY + L++HPDK +E EK K+++ Y+
Sbjct: 9 DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDE-EKMKELNTLYKKF 56
Score = 33.9 bits (78), Expect = 0.15
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Query: 45 DLLGVKPGCSDDE--LKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDVVHTLYVTMEE 100
DLLG+ + ++KAY ++HPD+ +E+K ++ ++TLY E
Sbjct: 9 DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKG-GDEEKMKE-------LNTLYKKFRE 58
>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional.
Length = 166
Score = 39.5 bits (92), Expect = 0.002
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 443 LKKAYRKLALKYHPD--KNPNEGEKFKQIS----MAYEVLSNPEKRELY 485
L+K Y + +KYHPD K E E+ I+ AY L + KR Y
Sbjct: 21 LEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
Score = 30.2 bits (68), Expect = 2.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 43 YYDLLGVKPGCSDD--ELKKAYRTMARKYHPDRDPKNEDKQQ 82
Y+ LLG+ + D L+K Y M KYHPD+ ++K+Q
Sbjct: 4 YFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQ 45
>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational
modification, protein turnover, chaperones].
Length = 174
Score = 38.9 bits (91), Expect = 0.003
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 429 YDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 486
+LGV+ QD +KKAYRKL + HPDK +G K + I E L E +E Y+
Sbjct: 116 LKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQ--EIQEAYE 171
Score = 35.0 bits (81), Expect = 0.075
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 440 QDELKKAYRKLALKYHPDKNPNEGE--------KFKQISMAYEVLSNPEKRELY 485
D LK YR+L YHPD+ E + +++ AY+ L +P R Y
Sbjct: 17 LDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEY 70
Score = 32.7 bits (75), Expect = 0.42
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 44 YDLLGVKPGCSDDELKKAYRTMARKYHPDR 73
+LGV+ D +KKAYR + + HPD+
Sbjct: 116 LKVLGVEIKADQDAIKKAYRKLLSEQHPDK 145
Score = 31.2 bits (71), Expect = 1.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 56 DELKKAYRTMARKYHPDRDPKNEDKQQKNR 85
D LK YR + R YHPDR K + +Q+
Sbjct: 18 DALKLQYRELQRAYHPDRFGKASEAEQRKA 47
>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional.
Length = 647
Score = 40.4 bits (95), Expect = 0.004
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 430 DILGVKPNCTQDE--LKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVL 476
D+LG+ + ++KAY + +YHPDK +E EK K+++ Y+ L
Sbjct: 15 DLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDE-EKMKRLNSLYKKL 62
Score = 36.5 bits (85), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 45 DLLGVKPGCSDDE--LKKAYRTMARKYHPDRDPKNEDKQQKNRKGKDVVHTLYVTMEE 100
DLLG+ + ++KAY ++YHPD+ +E+K ++ +++LY ++E
Sbjct: 15 DLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG-GDEEKMKR-------LNSLYKKLQE 64
>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional.
Length = 176
Score = 37.3 bits (87), Expect = 0.012
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 440 QDELKKAYRKLALKYHPDKNPNEGEKFKQISM--------AYEVLSNPEKRELY 485
+ L AYR + + HPD+ G+ K+++M AY+ L +P KR Y
Sbjct: 22 EAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARY 75
>gnl|CDD|166894 PRK00294, hscB, co-chaperone HscB; Provisional.
Length = 173
Score = 36.8 bits (85), Expect = 0.020
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 440 QDELKKAYRKLALKYHPDKNPNEGEKFKQISM--------AYEVLSNPEKRELY 485
D+L YR+LA + HPD+ + E+ +++++ AY+ L +P +R Y
Sbjct: 20 LDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARY 73
Score = 29.0 bits (65), Expect = 7.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 56 DELKKAYRTMARKYHPDRDPKNEDKQQK 83
D+L YR +AR+ HPDR +++Q+
Sbjct: 21 DQLATRYRELAREVHPDRFADAPEREQR 48
>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB. This
model describes the small subunit, Hsc20 (20K heat shock
cognate protein) of a pair of proteins Hsc66-Hsc20,
related to the DnaK-DnaJ heat shock proteins, which also
serve as molecular chaperones. Hsc20, unlike DnaJ,
appears not to have chaperone activity on its own, but
to act solely as a regulatory subunit for Hsc66 (i.e.,
to be a co-chaperone). The gene for Hsc20 in E. coli,
hscB, is not induced by heat shock [Protein fate,
Protein folding and stabilization].
Length = 155
Score = 34.1 bits (78), Expect = 0.11
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 440 QDELKKAYRKLALKYHPDKNPNEGEKFK------QISMAYEVLSNPEKRELY 485
Q L+K YR+L +YHPD + E+ ++ AY L +P +R Y
Sbjct: 5 QSRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56
>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional.
Length = 116
Score = 33.3 bits (76), Expect = 0.12
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 429 YDILGVKPNCTQDELKKAYRKLALKYHPD 457
Y IL + P +++ +++A+++L L+ HPD
Sbjct: 68 YKILNISPTASKERIREAHKQLMLRNHPD 96
>gnl|CDD|233960 TIGR02642, phage_xxxx, uncharacterized phage protein. This
uncharacterized protein is found in prophage regions of
Shewanella oneidensis MR-1, Vibrio vulnificus YJ016,
Yersinia pseudotuberculosis IP 32953, and Aeromonas
hydrophila ATCC7966. It appears to have regions of
sequence similarity to phage lambda antitermination
protein Q [Mobile and extrachromosomal element
functions, Prophage functions].
Length = 186
Score = 33.7 bits (77), Expect = 0.25
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 638 VCSECRGQGSRINPKDRCKTCNGKKTVRDRKILEVHIDKGMID 680
C CRG G + C TC G T R R +E + K
Sbjct: 101 KCPRCRGTGLIQRRQRECDTCAG--TGRFRPTVE-DLLKSFGV 140
Score = 29.1 bits (65), Expect = 6.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 388 VCSDCKGQGERINPKDKCRTCAG 410
C C+G G + +C TCAG
Sbjct: 101 KCPRCRGTGLIQRRQRECDTCAG 123
>gnl|CDD|227244 COG4907, COG4907, Predicted membrane protein [Function unknown].
Length = 595
Score = 34.1 bits (78), Expect = 0.33
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 20/68 (29%)
Query: 501 RLLLPNGYIRDVHGWQFG----------GRSAAKGEAIKEGGSGGGGGGFSSPMDIFEMF 550
R L I+D + F R+ + + + S GGGGGFS
Sbjct: 533 RKALDMEIIKDSYSPIFHNNYSRSFNNLNRAYSAIASSRRSSSSGGGGGFS--------- 583
Query: 551 MGGSLGGG 558
GG GGG
Sbjct: 584 -GGGSGGG 590
>gnl|CDD|179914 PRK05014, hscB, co-chaperone HscB; Provisional.
Length = 171
Score = 33.0 bits (76), Expect = 0.34
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 443 LKKAYRKLALKYHPDKNPNEGEKFK--------QISMAYEVLSNPEKRELY 485
L Y++L ++HPDK N E+ + I+ AY+ L +P KR Y
Sbjct: 20 LASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEY 70
>gnl|CDD|199910 cd10748, anti-TRAP, anti-TRAP (AT) protein specific to Bacilli. In
Bacillus subtilis and related bacteria, AT binds to the
TRAP protein, (tryptophan-activated trp RNA-binding
attenuation protein), effectively disrupting interaction
of TRAP with mRNAs. Upon binding of tryptophan, TRAP
(which forms a complex of 11 identical subunits)
interacts with a specific location in the leader RNA and
blocks translation of the tryptophan biosynthetic
operon. AT, in turn, recognizes the tryptophan-activated
TRAP complex and prevents RNA binding. AT is expressed
in response to high levels of uncharged tryptophan tRNA.
AT contains a zinc-binding motif that closely resembles
the zinc-binding motifs in the zinc-finger region of
DnaJ/Hsp40. AT has been shown to form homo-dodecameric
assemblies, and can actually do that in two different
relative orientations, resulting in two different
dodecamers. Recent data suggest that the trimeric form
of AT may be the biologically relevant active complex.
Length = 52
Score = 29.9 bits (67), Expect = 0.55
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 594 VICDKCEGRGGKKGAAESCPGCRGTGMTVTVQ 625
V C KCE G ++G CP C G G+ +T Q
Sbjct: 9 VTCPKCERAGEEEG--TPCPKCSGKGVILTAQ 38
>gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family
domain in Subtilisin_Novo-like proteins. Subtilisins
are a group of alkaline proteinases originating from
different strains of Bacillus subtilis. Novo is one of
the strains that produced enzymes belonging to this
group. The enzymes obtained from the Novo and BPN'
strains are identical. The Carlsburg and Novo
subtilisins are thought to have arisen from a common
ancestral protein. They have similar peptidase and
esterase activities, pH profiles, catalyze
transesterification reactions, and are both inhibited by
diispropyl fluorophosphate, though they differ in 85
positions in the amino acid sequence. Members of the
peptidases S8 and S35 clan include endopeptidases,
exopeptidases and also a tripeptidyl-peptidase. The S8
family has an Asp/His/Ser catalytic triad similar to
that found in trypsin-like proteases, but do not share
their three-dimensional structure and are not homologous
to trypsin. The S53 family contains a catalytic triad
Glu/Asp/Ser with an additional acidic residue Asp in the
oxyanion hole, similar to that of subtilisin.. The
stability of these enzymes may be enhanced by calcium,
some members have been shown to bind up to 4 ions via
binding sites with different affinity. Some members of
this clan contain disulfide bonds. These enzymes can be
intra- and extracellular, some function at extreme
temperatures and pH values.
Length = 291
Score = 32.3 bits (74), Expect = 0.90
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 506 NGYIRDVHGWQFGG 519
NGYI DV+GW F G
Sbjct: 40 NGYIDDVNGWNFLG 53
>gnl|CDD|185119 PRK15197, PRK15197, secreted effector protein PipB; Provisional.
Length = 291
Score = 31.4 bits (71), Expect = 1.8
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query: 526 EAIKEGGSGGGGGGFSSPMDIFEMFMGG-SLGGGRRRRERKGKDVVHQLTVSL-----ED 579
EA+K +SP I E F+ + GG RR ER ++V+ +LT SL +
Sbjct: 24 EAMKSA---------TSPRGILEWFVNFFTCGGVRRSNERCFREVIGKLTTSLLYVNKDA 74
Query: 580 LYRGTVKKLQLEKNVICDKCEGRG 603
+ G K+ LE C C G
Sbjct: 75 FFDGN--KIFLEDVNGCTICLSCG 96
>gnl|CDD|153327 cd07643, I-BAR_IMD_MIM, Inverse (I)-BAR, also known as the
IRSp53/MIM homology Domain (IMD), of Missing In
Metastasis. The IMD domain, also called
Inverse-Bin/Amphiphysin/Rvs (I-BAR) domain, is a
dimerization and lipid-binding module that bends
membranes and induces membrane protrusions. Members of
this subfamily include missing in metastasis (MIM) or
metastasis suppressor 1 (MTSS1), metastasis suppressor
1-like (MTSSL) or ABBA (Actin-Bundling protein with
BAIAP2 homology), and similar proteins. They contain an
N-terminal IMD and a WASP homology 2 (WH2) actin-binding
motif at the C-terminus. MIM was originally identified
as a missing transcript from metastatic bladder and
prostate cancer cells. It is a scaffold protein that
functions in a signaling pathway between the PDGF
receptor, Src kinases, and actin assembly. It may also
function as a cofactor of the Sonic hedgehog (Shh)
transcriptional pathway and may participate in tumor
development and progression via this pathway. ABBA
regulates actin and plasma membrane dynamics to promote
the extension of radial glia, which is important in
neuronal migration, axon guidance and neurogenesis. The
IMD domain of MIM binds and bundles actin filaments,
binds membranes, and interacts with the small GTPase
Rac.
Length = 231
Score = 30.9 bits (70), Expect = 2.1
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 18/62 (29%)
Query: 81 QQKNRKGKD-----------VVHTLYVTMEELYSGAVRKLAL-EKNVICSVCEGKLFVTC 128
Q+K RKGK V+ Y+ +EE AVR + E+ C+ FV+
Sbjct: 142 QKKARKGKGDLQPQLDSAMQDVNDKYLLLEETEKKAVRNALIEERGRFCT------FVSF 195
Query: 129 LG 130
L
Sbjct: 196 LK 197
>gnl|CDD|217284 pfam02915, Rubrerythrin, Rubrerythrin. This domain has a
ferritin-like fold.
Length = 137
Score = 30.0 bits (68), Expect = 2.6
Identities = 12/52 (23%), Positives = 17/52 (32%)
Query: 781 GNLIIVFSVKFPDVIPVDKVPAIEACLPPRPKVTIPENGEEVVLETMDPEKE 832
G L + F + +E P EN +E + M EKE
Sbjct: 47 GFLNKLLKDLFLGLELGILKEHVEYTFFPVADELTRENLKEAIEGAMLEEKE 98
>gnl|CDD|236951 PRK11667, PRK11667, hypothetical protein; Provisional.
Length = 163
Score = 29.7 bits (67), Expect = 4.0
Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 8/45 (17%)
Query: 514 GWQFGGRSAAKGEAIKEGGSGGGGGGFSSPMDIFEMFMGGSLGGG 558
SAA + G S GG SS + G L GG
Sbjct: 27 SLGDSLSSAASQLGGQAGSSQQGGWSLSS--------LTGLLSGG 63
>gnl|CDD|177577 PHA03292, PHA03292, envelope glycoprotein I; Provisional.
Length = 413
Score = 30.7 bits (69), Expect = 4.0
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 394 GQGERINPKDKCRTCAGKKFSCQAKRPNMVKETTFYDILGVKPNCTQDEL----KKAYRK 449
+ P ++ C +P+ T + +LG N T+D L + R
Sbjct: 227 TGLTTVAPPNETVVTGETALLCHWFQPSTRVPTLYLHLLGTTGNLTEDVLLTEDSEILRT 286
Query: 450 LALKYHPDKNPNEGEKFKQ 468
++P G+ FKQ
Sbjct: 287 PPPDPSSSRSPGAGDDFKQ 305
>gnl|CDD|152822 pfam12387, Peptidase_C74, Pestivirus NS2 peptidase. The pestivirus
NS2 peptidase is responsible for single cleavage between
NS2 and NS3 of the bovine viral diarrhea virus
polyprotein, a cleavage that is correlated with
cytopathogenicity. The peptidase is activated by its
interaction with 'J-domain protein interacting with
viral protein' - Jiv.
Length = 200
Score = 29.3 bits (66), Expect = 5.8
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 583 GTVKKLQLEKN---VICDKCEGRGGKKGAAESCPGCRGTGMTVT 623
+K L KN ++C CE R K +CP C G +T
Sbjct: 149 TIIKAATLSKNKHCILCTVCENRDWK---GGNCPKCGRQGPPIT 189
Score = 29.3 bits (66), Expect = 7.2
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 219 KNRKGKDVVHTLYVTMEELYS-----GAVRKLALEKN---VICSVCEGRGGKSKIVEKCS 270
K++ + V Y EE+Y ++ L KN ++C+VCE R K C
Sbjct: 124 KHKVRNETVAHWY-GEEEIYGMPKLVTIIKAATLSKNKHCILCTVCENRDWKG---GNCP 179
Query: 271 TCKGSG 276
C G
Sbjct: 180 KCGRQG 185
>gnl|CDD|178174 PLN02560, PLN02560, enoyl-CoA reductase.
Length = 308
Score = 29.7 bits (67), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 432 LGVKPNCTQDELKKAYRKLALKYHPDK 458
L V + T +LKKA K KY+P +
Sbjct: 18 LEVPDSATVADLKKAIHKRKKKYYPSR 44
Score = 29.7 bits (67), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 47 LGVKPGCSDDELKKAYRTMARKYHPDR 73
L V + +LKKA +KY+P R
Sbjct: 18 LEVPDSATVADLKKAIHKRKKKYYPSR 44
>gnl|CDD|165216 PHA02889, PHA02889, hypothetical protein; Provisional.
Length = 241
Score = 29.6 bits (66), Expect = 6.5
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 20/118 (16%)
Query: 656 KTCNGKKTVRDRKILEVHIDKGMI-DQQKIVFNGEGDQEPGLEHGDIIIVLEEKPHPVFK 714
K C GK ++I + ID +I + V N + E+ +I ++ E + K
Sbjct: 106 KKCMGKGQDSLQEIESIFIDDSLITKEDDFVKNLVSETNSSEEYDNITNIIIEHTNNTTK 165
Query: 715 RSGNN----------------LIIRPYEIALVEALCGFRRPIKTLDDRD--IIISAAP 754
+N +II Y I+ C F++ I +DD + I+I P
Sbjct: 166 NFFHNYKLYNLILIPICTLIIIIIVCY-ISCKHKTCFFKKKIDKIDDIEDFILIKLHP 222
>gnl|CDD|234238 TIGR03508, decahem_SO, decaheme c-type cytochrome, DmsE family.
Members of this family are small, decaheme c-type
cytochromes, related DmsE of Shewanella oneidensis MR-1,
which has been shown to be part of an anaerobic dimethyl
sulfoxide reductase.
Length = 258
Score = 29.3 bits (66), Expect = 6.9
Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Query: 596 CDKCEGRGGKKGAAESCPGCRGTGMTVTVQQFGPGMIQQIQTVCSECRGQGSRIN 650
C+ C G GGK P +T F ++ +VC C G+R N
Sbjct: 37 CESCHGPGGKHVKGGGEP-------MITFGSFSNLPAEKQNSVCLSCHKDGTRSN 84
>gnl|CDD|153233 cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase
(GATase1)-like domain found in a subgroup of proteins
similar to PfpI from Pyrococcus furiosus. Type 1
glutamine amidotransferase (GATase1)-like domain found
in a subgroup of proteins similar to PfpI from
Pyrococcus furiosus. PfpI is an ATP-independent
intracellular proteases which may hydrolyze small
peptides to provide a nutritional source. Only Cys of
the catalytic triad typical of GATase1 domains is
conserved in this group. This Cys residue is found in
the sharp turn between a beta strand and an alpha helix
termed the nucleophile elbow.
Length = 183
Score = 29.0 bits (66), Expect = 8.2
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 106 VRKLALEKNVICSVCEGKLFVTCLGKTQGLLGGR 139
+R+ A + SVC G L L GLL GR
Sbjct: 87 IRRQAARAKYVTSVCTGALL---LAAA-GLLDGR 116
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.138 0.416
Gapped
Lambda K H
0.267 0.0769 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 44,685,187
Number of extensions: 4513671
Number of successful extensions: 4868
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4315
Number of HSP's successfully gapped: 292
Length of query: 858
Length of database: 10,937,602
Length adjustment: 105
Effective length of query: 753
Effective length of database: 6,280,432
Effective search space: 4729165296
Effective search space used: 4729165296
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.0 bits)