Query psy10936
Match_columns 410
No_of_seqs 86 out of 88
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 22:18:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kq4_B Cubilin; protein-protei 98.0 0.00035 1.2E-08 68.1 17.6 174 79-272 23-268 (457)
2 4gz9_A Neuropilin-1, A5 protei 97.8 0.0018 6.2E-08 66.0 21.2 107 78-200 31-144 (577)
3 4gz9_A Neuropilin-1, A5 protei 97.5 0.0051 1.7E-07 62.7 17.9 92 79-186 151-254 (577)
4 3kq4_B Cubilin; protein-protei 97.4 0.0032 1.1E-07 61.4 14.5 116 79-212 139-265 (457)
5 1sfp_A ASFP; spermadhesin, bov 97.4 0.0014 4.8E-08 52.8 10.0 93 67-179 17-111 (114)
6 1spp_B Major seminal plasma gl 97.2 0.0031 1E-07 51.0 10.1 92 68-179 17-110 (116)
7 1spp_A Major seminal plasma gl 97.1 0.0028 9.5E-08 50.9 9.3 93 67-180 13-107 (109)
8 2qqk_A Neuropilin-2; VEGF rece 97.0 0.0055 1.9E-07 61.9 12.0 121 78-214 28-160 (579)
9 2wno_A Tumor necrosis factor-i 96.9 0.0055 1.9E-07 52.0 10.0 88 79-182 29-122 (149)
10 1nt0_A MAsp2, mannose-binding 96.8 0.024 8.4E-07 52.0 13.7 84 78-180 21-119 (286)
11 4aqb_A Mannan-binding lectin s 96.7 0.028 9.6E-07 52.8 14.2 84 78-180 22-120 (361)
12 3poj_A Mannan-binding lectin s 96.7 0.0091 3.1E-07 47.5 9.1 80 78-177 26-114 (115)
13 3dem_A Complement factor MAsp- 96.7 0.018 6E-07 52.3 11.9 96 65-179 6-119 (278)
14 1nzi_A Complement C1S componen 96.6 0.019 6.6E-07 47.9 10.5 89 78-186 18-121 (159)
15 2qqk_A Neuropilin-2; VEGF rece 96.5 0.13 4.4E-06 52.0 18.0 90 79-184 149-250 (579)
16 1szb_A Mannose binding lectin- 96.4 0.016 5.6E-07 49.3 9.3 81 79-178 26-121 (170)
17 3dem_A Complement factor MAsp- 96.2 0.25 8.5E-06 44.7 16.7 79 79-177 189-276 (278)
18 1nt0_A MAsp2, mannose-binding 96.2 0.034 1.2E-06 51.1 10.9 95 65-179 171-277 (286)
19 4aqb_A Mannan-binding lectin s 96.1 0.31 1.1E-05 45.7 17.1 82 80-181 190-280 (361)
20 2qqo_A Neuropilin-2; VEGF rece 95.8 0.033 1.1E-06 54.8 9.5 91 78-184 29-131 (460)
21 2qqm_A Neuropilin-1; VEGF rece 95.0 0.097 3.3E-06 51.2 9.7 93 78-186 32-140 (450)
22 1spp_B Major seminal plasma gl 91.0 2.3 7.9E-05 34.0 10.3 53 4-58 7-60 (116)
23 1sfp_A ASFP; spermadhesin, bov 90.3 2.9 0.0001 33.2 10.3 53 4-58 8-61 (114)
24 1spp_A Major seminal plasma gl 82.8 2.7 9.3E-05 33.3 6.1 53 4-58 4-57 (109)
25 2wno_A Tumor necrosis factor-i 77.7 28 0.00096 29.1 11.1 98 4-106 5-123 (149)
26 1nzi_A Complement C1S componen 77.1 24 0.00083 28.9 10.4 27 24-50 19-45 (159)
27 1szb_A Mannose binding lectin- 59.9 76 0.0026 26.5 10.3 40 9-50 8-52 (170)
28 4b4p_A FEDF, F18 fimbrial adhe 53.2 11 0.00038 32.9 3.7 44 171-216 106-149 (151)
29 2qqo_A Neuropilin-2; VEGF rece 40.2 1.5E+02 0.0053 28.8 10.0 96 4-104 6-128 (460)
30 2qqm_A Neuropilin-1; VEGF rece 40.1 1.2E+02 0.0041 29.4 9.2 92 4-103 9-130 (450)
31 2pp6_A Gifsy-2 prophage ATP-bi 38.1 3.9 0.00013 34.7 -1.4 64 117-184 26-89 (102)
32 3poj_A Mannan-binding lectin s 25.0 2.4E+02 0.0081 21.7 8.9 45 4-50 2-54 (115)
33 4ei6_A Valpha1 XV19 type II na 20.2 4.6E+02 0.016 23.3 8.7 137 158-310 32-186 (208)
No 1
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=97.96 E-value=0.00035 Score=68.12 Aligned_cols=174 Identities=17% Similarity=0.273 Sum_probs=124.6
Q ss_pred CCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccceeeee
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFRS 154 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~rS 154 (410)
++..|.--+.+.|++.|+|+|..+++. |. .|.|+|.|| + . ...+-.||+.... ..+.|
T Consensus 23 ~~~~C~w~I~~~~g~~i~L~f~~f~le~~~~C~-~D~l~i~d~--------~----~----~~~l~~~CG~~~p-~~~~S 84 (457)
T 3kq4_B 23 HGINCTWHILVQPNHLIHLMFETFHLEFHYNCT-NDYLEVYDT--------D----S----ETSLGRYCGKSIP-PSLTS 84 (457)
T ss_dssp SSCCCEEEEECCSSEEEEECCSCCCCCCCSSCC-SSEEEEECT--------T----S----SSEEEEECSSCCC-SCEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEEEeeecccCCCCC-ccEEEEEcC--------C----C----CcccceeCCCCCC-CcEEE
Confidence 567898777888999999999998864 65 489999996 1 1 1234558998654 68999
Q ss_pred ccceEEEEEeec--CCCCceEEEEeecCCCCCcceecccccceeEEee----cCccccceeeeeeee-------------
Q psy10936 155 SQNAALIQYRVP--TRGKGFSFYVRYHKNPTPCNILLEGLSDVYTLRN----YGKSVNCSLTTLYPA------------- 215 (410)
Q Consensus 155 SQN~AliqyRvp--~~G~gF~~~vr~~~Np~PCNil~~~~~~~yTl~n----~g~~rNCSfsiiyPv------------- 215 (410)
+.|..+|.|+-. ..++||.++.+.......|.-...+++|.++--| |....+|...|.=|.
T Consensus 85 ~~n~l~v~F~sd~~~~~~GF~~~y~~~~~~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~~f~l 164 (457)
T 3kq4_B 85 SGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSL 164 (457)
T ss_dssp SSSEEEEEEECCSSCCCSCCCCEEEEEESSSCEEEEECSSCCCEECTTTTSCCCSSCEEEEEECCCSSCCCEEEEEEEEC
T ss_pred eCCEEEEEEEecCccccCceeEeeecccccccccceeecCcEEECCCCCCCcCCCCceEEEEEEeCCCCEEEEEEEEEEe
Confidence 999999999863 5678999999998888899988888888887655 344567888776442
Q ss_pred ----------EEEEecCCC-----------------------------------CCCcceeecCCCCCCCccchhccccc
Q psy10936 216 ----------QVKVLSGKG-----------------------------------ESQPFRERTSSPQDNIPCNILLEGLS 250 (410)
Q Consensus 216 ----------~i~i~~~~~-----------------------------------~~~~~r~r~~~~~~~~~~~~~~~~~~ 250 (410)
-++|.+|.. ...||+++... .+-.|+-.+.+.+
T Consensus 165 e~~~~~C~~D~l~i~dg~~~~s~~~~~~cG~~~p~~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~--~~~~Cg~~~~~~~ 242 (457)
T 3kq4_B 165 EEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDG--SSTGCGGNLTTSS 242 (457)
T ss_dssp CCCBTTBCSSEEEEESSSSTTSCEEEEECSSSCCCCEECSSSCEEEEEECCSSCCCCEEEEEEEC--CCCCCEECCCSSE
T ss_pred ecCCCCcccceEEEecCCCCCcceeeeecCCCCCCCeEEcCCEEEEEEEeCCCCCcCCEEEEecc--ccCCCCCeEccCc
Confidence 133333321 12233333332 1357988888899
Q ss_pred cceeeccc----Cccccceeeeeecc
Q psy10936 251 DVYTLRNY----GKSVNCSLTTLYPA 272 (410)
Q Consensus 251 ~~~~~~~~----g~~~nCsl~~l~pa 272 (410)
|.++--|| ....+|+....-|.
T Consensus 243 G~i~SP~yP~~Yp~~~~C~w~I~~~~ 268 (457)
T 3kq4_B 243 GTFISPNYPMPYYHSSECYWWLKSSH 268 (457)
T ss_dssp EEEECTTTTSCCCSSCEEEEEECCST
T ss_pred ceeccCCCCCCCCCCCEEEEEEEeCC
Confidence 99887655 56778988775554
No 2
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=97.84 E-value=0.0018 Score=66.02 Aligned_cols=107 Identities=21% Similarity=0.346 Sum_probs=79.0
Q ss_pred CCCceEEEEE-ecCCCCeEEEEEE-eecC---CCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccceee
Q psy10936 78 VEPVACGVFL-LTDPDKLVEVYFD-YLDV---PCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVF 152 (410)
Q Consensus 78 s~Q~vCgiFF-I~EPdq~IeItv~-~Vdi---PC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~ 152 (410)
+++..|--.+ +++|.+.|.|+|. ++++ +|. -|.|+|.||-. . + ...+-.||++... ..+
T Consensus 31 p~n~~C~W~I~~p~~~~~I~L~F~~~f~le~~~C~-~Dyl~I~dG~~--------~-~-----~~~lg~~CG~~~p-~~i 94 (577)
T 4gz9_A 31 HPSEKCEWLIQAPEPYQRIMINFNPHFDLEDRDCK-YDYVEVIDGEN--------E-G-----GRLWGKFCGKIAP-SPV 94 (577)
T ss_dssp CSSCEEEEEEECSSTTCCEEEEECSCCBCCCGGGT-SSEEEEEESSS--------T-T-----SEEEEEECSSSCC-CCE
T ss_pred CCCCeEEEEEEECCCCcEEEEEEEeeeeecCCCCC-ccEEEEEeCCC--------C-C-----CcEEEEecCCCCC-CCE
Confidence 3578898555 4577889999996 5653 465 58999999832 1 1 1224568998754 578
Q ss_pred eeccceEEEEEee--cCCCCceEEEEeecCCCCCcceecccccceeEEee
Q psy10936 153 RSSQNAALIQYRV--PTRGKGFSFYVRYHKNPTPCNILLEGLSDVYTLRN 200 (410)
Q Consensus 153 rSSQN~AliqyRv--p~~G~gF~~~vr~~~Np~PCNil~~~~~~~yTl~n 200 (410)
.|+.|.+.|.|+= ...++||.++.+.......|.-...+++|.++--|
T Consensus 95 ~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~~~~C~~~~~~~~G~i~SPn 144 (577)
T 4gz9_A 95 VSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAPTGVIKSPG 144 (577)
T ss_dssp ECSSSEEEEEEECCSSCCCCBCEEEEEECCCCCEEEEEECSSEEEEECTT
T ss_pred EEeCCeEEEEEEECCCCCCCCeEEEEEEeecCcccceeecCCCccccCCC
Confidence 9999999999984 56788999999998888888887777777655443
No 3
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=97.45 E-value=0.0051 Score=62.74 Aligned_cols=92 Identities=17% Similarity=0.337 Sum_probs=70.7
Q ss_pred CCceEEEEEecCCCCeEEEEEEeecCC----------CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCcc
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDYLDVP----------CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRI 148 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~VdiP----------C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~ 148 (410)
++..|.-.+.+.|+..|.|+|..+++. |. -|.|+|.||-. ... | .+-.||++...
T Consensus 151 ~n~~C~W~I~~p~g~~I~L~F~~F~lE~~~~~~~~~~C~-~D~l~I~dG~~--------~~~---~---~lg~~CG~~~P 215 (577)
T 4gz9_A 151 NSLECTYIIFAPKMSEIILEFESFDLEQDSNPPGGMFCR-YDRLEIWDGFP--------EVG---P---HIGRYCGQKTP 215 (577)
T ss_dssp SSCEEEEEEECGGGCCEEEEEEEEECCCCCSCSTTCCCC-SSEEEEESSST--------TTS---C---EEEEECSSSCC
T ss_pred CCceEEEEEEECCCCEEEEEEEEEEeeecCCCCCCCccC-ccEEEEEcCCC--------CCC---c---eeEEEeCCCCC
Confidence 456788666888999999999999974 44 48899999832 111 2 23458998764
Q ss_pred ceeeeeccceEEEEEee--cCCCCceEEEEeecCCCCCcc
Q psy10936 149 KTVFRSSQNAALIQYRV--PTRGKGFSFYVRYHKNPTPCN 186 (410)
Q Consensus 149 ~~~~rSSQN~AliqyRv--p~~G~gF~~~vr~~~Np~PCN 186 (410)
..++|+.|...|.|+= ...++||.++.+...+-.+++
T Consensus 216 -~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~v~~~~s~~ 254 (577)
T 4gz9_A 216 -GRIRSSSGVLSMVFYTDSAIAKEGFSANYSVLQSSISED 254 (577)
T ss_dssp -CCEEECSSEEEEEEECCSSCCCCEEEEEEEECCCCCCTT
T ss_pred -CCcceeCCEEEEEEEECCCCCCceEEEEEEEEccccccc
Confidence 6789999999999985 346789999999998887764
No 4
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=97.36 E-value=0.0032 Score=61.36 Aligned_cols=116 Identities=22% Similarity=0.285 Sum_probs=85.1
Q ss_pred CCceEEEEEecCCCCeEEEEEEeecC-----CCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccceeee
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDYLDV-----PCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFR 153 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~Vdi-----PC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~r 153 (410)
++..|.-.+.+.+++.|.|+|..+++ .|. .+.|.+.||.. .+ -|+ +-.||++... ..+.
T Consensus 139 ~~~~C~w~I~~~~g~~i~l~f~~f~le~~~~~C~-~D~l~i~dg~~---------~~--s~~---~~~~cG~~~p-~~~~ 202 (457)
T 3kq4_B 139 NNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYY-TDFLEIRDGGY---------EK--SPL---LGIFYGSNLP-PTII 202 (457)
T ss_dssp SSCEEEEEECCCSSCCCEEEEEEEECCCCBTTBC-SSEEEEESSSS---------TT--SCE---EEEECSSSCC-CCEE
T ss_pred CCceEEEEEEeCCCCEEEEEEEEEEeecCCCCcc-cceEEEecCCC---------CC--cce---eeeecCCCCC-CCeE
Confidence 34678866677788999999999997 675 59999999842 11 122 2457998754 5788
Q ss_pred eccceEEEEEeecCC--CCceEEEEeecCCCCCcceecccccceeEEeec----Cccccceeeee
Q psy10936 154 SSQNAALIQYRVPTR--GKGFSFYVRYHKNPTPCNILLEGLSDVYTLRNY----GKSVNCSLTTL 212 (410)
Q Consensus 154 SSQN~AliqyRvp~~--G~gF~~~vr~~~Np~PCNil~~~~~~~yTl~n~----g~~rNCSfsii 212 (410)
|+.|...|.|+=... ++||.+... .-+..|+-...+++|.++--|| ....+|...|.
T Consensus 203 S~~n~l~v~F~sd~~~~~~GF~~~y~--~~~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~ 265 (457)
T 3kq4_B 203 SHSNKLWLKFKSDQIDTRSGFSAYWD--GSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLK 265 (457)
T ss_dssp CSSSCEEEEEECCSSCCCCEEEEEEE--CCCCCCEECCCSSEEEEECTTTTSCCCSSCEEEEEEC
T ss_pred EcCCEEEEEEEeCCCCCcCCEEEEec--cccCCCCCeEccCcceeccCCCCCCCCCCCEEEEEEE
Confidence 999999999987543 567766554 4567899888889998887654 34567887775
No 5
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=97.35 E-value=0.0014 Score=52.77 Aligned_cols=93 Identities=17% Similarity=0.284 Sum_probs=71.5
Q ss_pred cCcceEeeeCCCCCceEEEEEecCCCCeEEEEEEeecCCCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCC
Q psy10936 67 KEGHFFYKSKSVEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTK 146 (410)
Q Consensus 67 eeGef~F~ssrs~Q~vCgiFFI~EPdq~IeItv~~VdiPC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~ 146 (410)
..|.++-+ -+++..|.-.+.+.|++.|.|+|..+++.|. -+.|.|.||-. +. |+ +-.||++.
T Consensus 17 ~~G~i~Sp--y~~~~~C~w~I~~~~g~~I~l~f~~f~l~C~-~D~l~i~dg~~----------~~--~~---~~~~CG~~ 78 (114)
T 1sfp_A 17 ESGVIATY--YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCN-KESLEIIDGLP----------GS--PV---LGKICEGS 78 (114)
T ss_dssp SEEEEECC--CSSCSEEEEEEECCTTCEEEEEEEEEECCTT-TEEEEEESSST----------TS--CE---EEEESEEE
T ss_pred CcEEEeCC--CcCCCCEEEEEEeCCCCEEEEEEeeeeeecC-CCEEEEEcCCC----------CC--cc---eeEecCcC
Confidence 34665533 2468899977788899999999999999997 58999999831 11 22 34679987
Q ss_pred ccceeeeeccceEEEEEeecC--CCCceEEEEeec
Q psy10936 147 RIKTVFRSSQNAALIQYRVPT--RGKGFSFYVRYH 179 (410)
Q Consensus 147 ~~~~~~rSSQN~AliqyRvp~--~G~gF~~~vr~~ 179 (410)
...+.|+.|...|.|+=.. .++||.++.+..
T Consensus 79 --p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 111 (114)
T 1sfp_A 79 --LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 111 (114)
T ss_dssp --EEEEECSSSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred --CCCEEecCCeEEEEEEECCCCCCCCEEEEEEEE
Confidence 3789999999999998654 578999887654
No 6
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=97.16 E-value=0.0031 Score=51.04 Aligned_cols=92 Identities=24% Similarity=0.420 Sum_probs=71.2
Q ss_pred CcceEeeeCCCCCceEEEEEecCCCCeEEEEEEeecCCCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCc
Q psy10936 68 EGHFFYKSKSVEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKR 147 (410)
Q Consensus 68 eGef~F~ssrs~Q~vCgiFFI~EPdq~IeItv~~VdiPC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~ 147 (410)
.|.++-+ -+++..|.--+.+.|++.|.|+|..+++.|. -|.|.|.||-. . -| .+..||++.
T Consensus 17 ~G~i~SP--Yp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~-~D~l~i~dg~~--------~----~~---~~~~~CG~~- 77 (116)
T 1spp_B 17 SGSISNT--DRQKNLCTWTILMKPDQKVRMAIPYLNLACG-KEYVEVFDGLL--------S----GP---SYGKLCAGA- 77 (116)
T ss_dssp EEEEECC--SSCCSEEEEEEECCTTCEEEEEEEEEECCBT-TEEEEEESSST--------T----SC---EEEEESEEE-
T ss_pred ceEEeCC--CcCCCCEEEEEEeCCCCEEEEEEeeCcccCC-CCEEEEEcCCC--------C----Cc---ccccccCcC-
Confidence 4655533 2468899977788899999999999999997 58999999831 1 12 345679987
Q ss_pred cceeeeeccceEEEEEeecC--CCCceEEEEeec
Q psy10936 148 IKTVFRSSQNAALIQYRVPT--RGKGFSFYVRYH 179 (410)
Q Consensus 148 ~~~~~rSSQN~AliqyRvp~--~G~gF~~~vr~~ 179 (410)
...+.|+.|...|.|+=.. .++||.++.+..
T Consensus 78 -p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 110 (116)
T 1spp_B 78 -AIVFLSTANTMTIKYNRISGNSSSPFLIYFYGS 110 (116)
T ss_dssp -EEEEECSSSEEEEEEEESSCSCCCCCEEEEEEE
T ss_pred -CCCEEecCCEEEEEEEECCCCCCCCEEEEEEEe
Confidence 3789999999999998654 578999987754
No 7
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=97.11 E-value=0.0028 Score=50.91 Aligned_cols=93 Identities=16% Similarity=0.263 Sum_probs=70.4
Q ss_pred cCcceEeeeCCCCCceEEEEEecCCCCeEEEEEEeecCCCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCC
Q psy10936 67 KEGHFFYKSKSVEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTK 146 (410)
Q Consensus 67 eeGef~F~ssrs~Q~vCgiFFI~EPdq~IeItv~~VdiPC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~ 146 (410)
..|.++-+ =+++..|.-.+.+.|++.|.|+|..+++.|. -|.|.|.||-. . . | .+-.||++.
T Consensus 13 ~~G~i~SP--Yp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~-~D~l~I~dg~~--------~--~--~---~~~~~CG~~ 74 (109)
T 1spp_A 13 DYGTIFTY--KGPKTECVWTLQVDPKYKLLVSIPTLNLTCG-KEYVEVLEGAP--------G--S--K---SLGKFCEGL 74 (109)
T ss_dssp SEEEEECC--CSSCSEEEEEEECCTTSEEEEEEEEEECCTT-TEEEEEESSST--------T--S--C---EEEEESEEE
T ss_pred CcEEEeCC--CCCCCcEEEEEEcCCCCEEEEEEeeeeccCC-CCEEEEEeCCC--------C--C--c---hhhhhhCCC
Confidence 44665544 2367899877788899999999999999997 58999999841 0 1 2 345679986
Q ss_pred ccceeeeeccceEEEEEeecC--CCCceEEEEeecC
Q psy10936 147 RIKTVFRSSQNAALIQYRVPT--RGKGFSFYVRYHK 180 (410)
Q Consensus 147 ~~~~~~rSSQN~AliqyRvp~--~G~gF~~~vr~~~ 180 (410)
...+.| .|...|.|+=.. .++||.++.+..+
T Consensus 75 --p~~~~S-~n~l~v~F~Sd~~~~~~GF~~~y~~~~ 107 (109)
T 1spp_A 75 --SILNRG-SSGMTVKYKRDSGHPASPYEIIFLRDS 107 (109)
T ss_dssp --EEEEEE-CTTCEEEEEECTTCCCCCCEEEEEEEC
T ss_pred --CCCEEE-CCEEEEEEEeCCCCCCCCEEEEEEEeC
Confidence 378999 999999998764 4789998877543
No 8
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=96.96 E-value=0.0055 Score=61.86 Aligned_cols=121 Identities=17% Similarity=0.374 Sum_probs=87.9
Q ss_pred CCCceEEEEEec-CCCCeEEEEEE-eecCC---CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccceee
Q psy10936 78 VEPVACGVFLLT-DPDKLVEVYFD-YLDVP---CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVF 152 (410)
Q Consensus 78 s~Q~vCgiFFI~-EPdq~IeItv~-~VdiP---C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~ 152 (410)
+++..|.-.+.+ +|++.|.|+|. ++++. |. -+.|.|.||..-+ ...+-.||++... ..+
T Consensus 28 p~~~~C~w~I~~p~~~~~I~l~F~~~f~le~~~C~-~D~l~i~dg~~~~--------------~~~l~~~CG~~~p-~~i 91 (579)
T 2qqk_A 28 PSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHDCK-YDFIEIRDGDSES--------------ADLLGKHCGNIAP-PTI 91 (579)
T ss_dssp CSSCCEEEEEECSSTTSEEEEEECSCCBCCCTTSS-SSEEEEEESSSTT--------------SEEEEEECTTSCC-CCE
T ss_pred cCCCEEEEEEEECCCCcEEEEEEecccccccCCCC-eeEEEEEeCCCCC--------------cceeeeECCCCCC-CCE
Confidence 357789744433 45689999998 77753 65 6899999995211 1123457998754 578
Q ss_pred eeccceEEEEEeec--CCCCceEEEEeecCCC-CCcceecccccceeEEe----ecCccccceeeeeee
Q psy10936 153 RSSQNAALIQYRVP--TRGKGFSFYVRYHKNP-TPCNILLEGLSDVYTLR----NYGKSVNCSLTTLYP 214 (410)
Q Consensus 153 rSSQN~AliqyRvp--~~G~gF~~~vr~~~Np-~PCNil~~~~~~~yTl~----n~g~~rNCSfsiiyP 214 (410)
.|+.|...|.|+=. ..++||.++.+..+.. ..|+-...+++|..+=- +|....+|...|.=|
T Consensus 92 ~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~ 160 (579)
T 2qqk_A 92 ISSGSMLYIKFTSDYARQGAGFSLRYEIFKTGSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAK 160 (579)
T ss_dssp ECSSSEEEEEEECC---CCCBCEEEEEEECCCCCCCCCEECCSEEEEECTTTTSCCCSSCEEEEEEECC
T ss_pred EecCCEEEEEEEECCCCCCCceEEEEEEcccccccccceeccCCceecCCCCcccCCCCCeEEEEEEcC
Confidence 89999999999876 3578999999887554 44998888888887754 456678899888744
No 9
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=96.92 E-value=0.0055 Score=52.03 Aligned_cols=88 Identities=15% Similarity=0.233 Sum_probs=68.1
Q ss_pred CCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccceeeee
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFRS 154 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~rS 154 (410)
++..|.-.+.+.+++.|.|+|..+++. |. .|.|.|.||-.-. ...+..||++... ..+.|
T Consensus 29 ~n~~C~W~I~~~~g~~I~L~F~~f~le~~~~C~-~D~l~I~dg~~~~--------------~~~~~~~CG~~~p-~~~~S 92 (149)
T 2wno_A 29 DNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCL-ADYVEIYDSYDDV--------------HGFVGRYCGDELP-DDIIS 92 (149)
T ss_dssp TTCEEEEEEECCTTCEEEEEEEEEECCCCTTCC-SSEEEEESSSSSS--------------SSEEEEECSSSCC-CCEEC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEEEecCCCCCC-CCEEEEecCCCCC--------------cceeeeEcCCCCC-CCEEE
Confidence 578998777788899999999999964 54 6899999984211 1234568998754 68999
Q ss_pred ccceEEEEEeecC--CCCceEEEEeecCCC
Q psy10936 155 SQNAALIQYRVPT--RGKGFSFYVRYHKNP 182 (410)
Q Consensus 155 SQN~AliqyRvp~--~G~gF~~~vr~~~Np 182 (410)
+.|...|.|+-.. .++||.++.+....+
T Consensus 93 ~~n~l~v~F~Sd~~~~~~GF~a~y~~~~~~ 122 (149)
T 2wno_A 93 TGNVMTLKFLSDASVTAGGFQIKYVAMDPV 122 (149)
T ss_dssp SSSEEEEEEECCSSCCCCEEEEEEEEECC-
T ss_pred eCCEEEEEEEECCCCCCCCEEEEEEEECCC
Confidence 9999999999765 478999998876654
No 10
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=96.76 E-value=0.024 Score=52.04 Aligned_cols=84 Identities=17% Similarity=0.293 Sum_probs=66.0
Q ss_pred CCCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCc-----c
Q psy10936 78 VEPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKR-----I 148 (410)
Q Consensus 78 s~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~-----~ 148 (410)
+++..|.-.+.+.+++.|.|+|..+++. |. .|.|+|.||.. ....||++.. .
T Consensus 21 p~~~~C~w~I~~p~g~~I~L~F~~f~le~~~~C~-~D~l~I~dg~~------------------~~~~~CG~~~~~~~~~ 81 (286)
T 1nt0_A 21 GNHQDRSWTLTAPPGFRLRLYFTHFNLELSYRCE-YDFVKLTSGTK------------------VLATLCGQESTDTERA 81 (286)
T ss_dssp CSSCCEEEEEECCTTEEEEEEEEEEECCCCGGGC-SSEEEEEETTE------------------EEEEECSSSCCSSCBC
T ss_pred cCCCcEEEEEEcCCCCEEEEEEEEEEecCCCCCC-CcEEEEECCCe------------------EeceECCCcCCCcccC
Confidence 3678999777888999999999999964 64 68999999831 2446799863 2
Q ss_pred c--eeeeeccceEEEEEeecCC----CCceEEEEeecC
Q psy10936 149 K--TVFRSSQNAALIQYRVPTR----GKGFSFYVRYHK 180 (410)
Q Consensus 149 ~--~~~rSSQN~AliqyRvp~~----G~gF~~~vr~~~ 180 (410)
. ..+.|+.|...|.|+-... ++||.++.+...
T Consensus 82 P~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~~~ 119 (286)
T 1nt0_A 82 PGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAED 119 (286)
T ss_dssp CTTCEEECSSSEEEEEEECCC----CCCEEEEEEEEEE
T ss_pred CCCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEecc
Confidence 2 7899999999999987653 489999988763
No 11
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=96.75 E-value=0.028 Score=52.82 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=62.1
Q ss_pred CCCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCc------
Q psy10936 78 VEPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKR------ 147 (410)
Q Consensus 78 s~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~------ 147 (410)
+++..|.-.+.+.+++.|.|+|..+++. |. -|.|+|.||....+ .||+...
T Consensus 22 p~n~~C~W~I~~~~g~~I~l~F~~f~lE~~~~C~-~D~l~i~dg~~~~~------------------~~cG~~~~~~~~~ 82 (361)
T 4aqb_A 22 PSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCE-YDYVKVETEDQVLA------------------TFCGRETTDTEQT 82 (361)
T ss_dssp CSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGC-SSEEEEECSSCEEE------------------EECSBSSSSSSCC
T ss_pred CCCCeEEEEEEECCCCEEEEEEeEEEecCCCCCC-ceEEEEccCCcccc------------------eeeccccCCCccC
Confidence 3578898666788999999999999863 43 58999999854432 2454432
Q ss_pred -cceeeeeccceEEEEEee----cCCCCceEEEEeecC
Q psy10936 148 -IKTVFRSSQNAALIQYRV----PTRGKGFSFYVRYHK 180 (410)
Q Consensus 148 -~~~~~rSSQN~AliqyRv----p~~G~gF~~~vr~~~ 180 (410)
..+.+.|+.|...|.|+= ..++.||.++.+...
T Consensus 83 ~~~~~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~ 120 (361)
T 4aqb_A 83 PGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVD 120 (361)
T ss_dssp CTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEE
T ss_pred CCccceeccCCEeEEEEEeCCcccccccccccceeecc
Confidence 136799999999999995 445569999887653
No 12
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=96.70 E-value=0.0091 Score=47.54 Aligned_cols=80 Identities=19% Similarity=0.446 Sum_probs=61.2
Q ss_pred CCCceEEEEEecCCCCeEEEEEE-eecC------CCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccce
Q psy10936 78 VEPVACGVFLLTDPDKLVEVYFD-YLDV------PCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKT 150 (410)
Q Consensus 78 s~Q~vCgiFFI~EPdq~IeItv~-~Vdi------PC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~ 150 (410)
+++..|.-.+.+.+++.|.|+|. .+++ .|. .+.|.|.||-.+ .-.||++... .
T Consensus 26 p~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~~~~C~-~D~l~i~dg~~~------------------~~~~CG~~~p-~ 85 (115)
T 3poj_A 26 PKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCP-YDYIKIKAGSKV------------------WGPFCGEKSP-E 85 (115)
T ss_dssp CTTCEEEEEEECCTTCCCEEEECSCCBBCCCSSSSSC-SCEEEEEETTEE------------------EEEECBSSCC-C
T ss_pred cCCCeEEEEEEcCCCCEEEEEEecceecccCCCCCCC-CeEEEEEcCCcc------------------cccCcCCCCC-C
Confidence 35788987778888999999998 6886 455 689999998321 2358998754 5
Q ss_pred eeeeccceEEEEEeec--CCCCceEEEEe
Q psy10936 151 VFRSSQNAALIQYRVP--TRGKGFSFYVR 177 (410)
Q Consensus 151 ~~rSSQN~AliqyRvp--~~G~gF~~~vr 177 (410)
.+.|+.|...|.|+=. ..++||.++.+
T Consensus 86 ~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~ 114 (115)
T 3poj_A 86 PISTQSHSIQILFRSDNSGENRGWRLSYR 114 (115)
T ss_dssp CEECCCSEEEEEEECCSSCCCCBCEEEEE
T ss_pred CEEecCCEEEEEEEcCCCCCCCCEEEEEE
Confidence 7899999999999865 35678887653
No 13
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=96.68 E-value=0.018 Score=52.27 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=69.5
Q ss_pred eecCcceEee---eCCCCCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchh
Q psy10936 65 TSKEGHFFYK---SKSVEPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHE 137 (410)
Q Consensus 65 ~SeeGef~F~---ssrs~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~e 137 (410)
....|.++-+ ..-+++..|.-.+.+.|++.|.|+|..+++. |. -|.|.|.||-.
T Consensus 6 t~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~C~-~D~l~v~dg~~------------------ 66 (278)
T 3dem_A 6 NNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCE-YDYVKVETEDQ------------------ 66 (278)
T ss_dssp -CCEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGC-SSEEEEECSSC------------------
T ss_pred ccCCceEeCCCCCCCCcCCCcEEEEEEECCCCEEEEEEEEEEeCCCCCCC-CcEEEEecCCc------------------
Confidence 4455554422 2223568898777888899999999999975 54 69999999721
Q ss_pred hhhhhcCCCcc-------ceeeeeccceEEEEEeecCC----CCceEEEEeec
Q psy10936 138 RFTEFCGTKRI-------KTVFRSSQNAALIQYRVPTR----GKGFSFYVRYH 179 (410)
Q Consensus 138 R~~efC~~~~~-------~~~~rSSQN~AliqyRvp~~----G~gF~~~vr~~ 179 (410)
....||+.... ...+.|+.|...|.|+=... .+||.++.+..
T Consensus 67 ~~~~~CG~~~~~~~~~~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~ 119 (278)
T 3dem_A 67 VLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAV 119 (278)
T ss_dssp EEEEECSBSSSSSSCCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEE
T ss_pred ccceEcCCcCCCcccCCCCccEEecCCeEEEEEecCcccccccceeEEEEEEe
Confidence 24568988642 36899999999999997643 36999988765
No 14
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.56 E-value=0.019 Score=47.86 Aligned_cols=89 Identities=18% Similarity=0.294 Sum_probs=64.9
Q ss_pred CCCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCcc-----
Q psy10936 78 VEPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRI----- 148 (410)
Q Consensus 78 s~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~----- 148 (410)
+++..|.-.+.+.++..|.|+|..+++. |. -+.|.|.||-. ....||+....
T Consensus 18 p~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~-~D~l~i~dg~~------------------~~~~~CG~~~~~~~~~ 78 (159)
T 1nzi_A 18 PSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCA-YDSVQIISGDT------------------EEGRLCGQRSSNNPHS 78 (159)
T ss_dssp CSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGC-SSEEEEEC---------------------CCEEECSEECCCCSSC
T ss_pred CCCCCEEEEEEeCCCCEEEEEEeEEEecCCCCCC-CCEEEEEeCCc------------------hhcccCCCCCCCcccC
Confidence 3578898666788899999999999874 43 58999999831 23457987643
Q ss_pred --ceeeeeccceEEEEEeecCCC----CceEEEEeecCCCCCcc
Q psy10936 149 --KTVFRSSQNAALIQYRVPTRG----KGFSFYVRYHKNPTPCN 186 (410)
Q Consensus 149 --~~~~rSSQN~AliqyRvp~~G----~gF~~~vr~~~Np~PCN 186 (410)
...+.|+.|.+.|.|+=.... +||.++..... ...|.
T Consensus 79 P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d-~~eC~ 121 (159)
T 1nzi_A 79 PIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATD-INECT 121 (159)
T ss_dssp CCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEE-CCTTT
T ss_pred CcceeEEecCCeEEEEEEecCccCcccccceeeeeccc-CcccC
Confidence 168999999999999977542 79998776542 23454
No 15
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=96.51 E-value=0.13 Score=51.98 Aligned_cols=90 Identities=23% Similarity=0.410 Sum_probs=66.5
Q ss_pred CCceEEEEEecCCCCeEEEEEEeecCC----------CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCcc
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDYLDVP----------CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRI 148 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~VdiP----------C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~ 148 (410)
++..|.-.+.+.|+..|.|+|..+++. |. .|.|.|.||-. +.-|+ +-.||++...
T Consensus 149 ~~~~C~w~I~~~~g~~I~l~F~~f~le~~~~~~~~~~C~-~D~l~I~dg~~-----------~~~~~---~~~~CG~~~p 213 (579)
T 2qqk_A 149 HNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCK-YDWLDIWDGIP-----------HVGPL---IGKYCGTKTP 213 (579)
T ss_dssp SSCEEEEEEECCTTEEEEEEEEEEEC--------------CCEEEEESSST-----------TTSCE---EEEECSSSCC
T ss_pred CCCeEEEEEEcCCCCEEEEEEEEEEeecccccccCCCCC-CEEEEEEeCCC-----------CCCce---eEEeCCCCCC
Confidence 457888777788999999999999864 44 68999999842 11122 3468998754
Q ss_pred ceeeeeccceEEEEEeec--CCCCceEEEEeecCCCCC
Q psy10936 149 KTVFRSSQNAALIQYRVP--TRGKGFSFYVRYHKNPTP 184 (410)
Q Consensus 149 ~~~~rSSQN~AliqyRvp--~~G~gF~~~vr~~~Np~P 184 (410)
..+.|+.|...|.|+=. ..++||.++......+.|
T Consensus 214 -~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~~~~~~~ 250 (579)
T 2qqk_A 214 -SELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPL 250 (579)
T ss_dssp -CCEEECSSEEEEEEECCSSCCCCEEEEEEEEEECCCC
T ss_pred -CcEEeeCCeEEEEEeccccccccceEEEEEEEecccc
Confidence 67899999999999864 457899999988776544
No 16
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.40 E-value=0.016 Score=49.30 Aligned_cols=81 Identities=21% Similarity=0.364 Sum_probs=62.8
Q ss_pred CCceEEEEEecCCCCeEEEEEEeecCC----CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCc-----cc
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKR-----IK 149 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~VdiP----C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~-----~~ 149 (410)
++..|.--+.+.++..|.|+|..+++. |. -+.|.|.||- .....||+... ..
T Consensus 26 ~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~-~D~l~i~dg~------------------~~~~~~CG~~~~~~~~~P 86 (170)
T 1szb_A 26 NDQERRWTLTAPPGYRLRLYFTHFDLELSHLCE-YDFVKLSSGA------------------KVLATLCGQESTDTERAP 86 (170)
T ss_dssp SSCEEEEEEECCTTEEEEEEEEEEECCCCTTSC-SSEEEEESSS------------------SEEEEECSBTTTTCSSSC
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEEEccCCCCCC-CCEEEEEeCC------------------ccccccCCCCCCccccCC
Confidence 577898666778899999999999864 54 6899999982 12446899873 22
Q ss_pred --eeeeeccceEEEEEeecCCC----CceEEEEee
Q psy10936 150 --TVFRSSQNAALIQYRVPTRG----KGFSFYVRY 178 (410)
Q Consensus 150 --~~~rSSQN~AliqyRvp~~G----~gF~~~vr~ 178 (410)
..+.|+.|...|.|+=.... .||.+...-
T Consensus 87 ~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~ 121 (170)
T 1szb_A 87 GKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 121 (170)
T ss_dssp TTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred CCceEEeeCCeEEEEEeccccccCcCcCceeeeec
Confidence 78999999999999876543 799886654
No 17
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=96.24 E-value=0.25 Score=44.71 Aligned_cols=79 Identities=18% Similarity=0.380 Sum_probs=58.3
Q ss_pred CCceEEEEEecCCCCeEEEEEEe-ecCC------CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCcccee
Q psy10936 79 EPVACGVFLLTDPDKLVEVYFDY-LDVP------CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTV 151 (410)
Q Consensus 79 ~Q~vCgiFFI~EPdq~IeItv~~-VdiP------C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~ 151 (410)
++..|.-.+-+.++..|.|+|.. +++. |. -|.|.|.||=. .+-.||+.... ..
T Consensus 189 ~~~~C~w~i~~~~g~~i~l~f~~~f~le~~~~~~C~-~D~l~i~dg~~------------------~~~~~CG~~~p-~~ 248 (278)
T 3dem_A 189 KSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCP-YDYIKIKVGPK------------------VLGPFCGEKAP-EP 248 (278)
T ss_dssp SSCEEEEEEECCTTCCEEEEECSCCBBCCCSSSSSS-SCEEEEEETTE------------------EEEEECBSSCC-CC
T ss_pred CcCeEEEEEEeCCCcEEEEEEccccccccCCCCCCC-CCEEEEecCCc------------------ccccccCCCCC-CC
Confidence 34578866677888899999986 7753 55 58899998821 12349998754 67
Q ss_pred eeeccceEEEEEeecC--CCCceEEEEe
Q psy10936 152 FRSSQNAALIQYRVPT--RGKGFSFYVR 177 (410)
Q Consensus 152 ~rSSQN~AliqyRvp~--~G~gF~~~vr 177 (410)
+.|+.|...|.|+-.. .++||.++.+
T Consensus 249 ~~s~~~~l~v~F~sd~~~~~~GF~~~y~ 276 (278)
T 3dem_A 249 ISTQSHSVLILFHSDNSGENRGWRLSYR 276 (278)
T ss_dssp EECSCSEEEEEEECCSSCCCCBCEEEEE
T ss_pred EEEcCCEEEEEEEECCCCCcCCEEEEEE
Confidence 8999999999998755 4678887654
No 18
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=96.20 E-value=0.034 Score=51.08 Aligned_cols=95 Identities=14% Similarity=0.229 Sum_probs=68.6
Q ss_pred eecCcceEe---eeCCCCCceEEEEEecCCCCeEEEEEE-eecCC------CCCCCeEEEEeeeeEccccCCCCCCCCCc
Q psy10936 65 TSKEGHFFY---KSKSVEPVACGVFLLTDPDKLVEVYFD-YLDVP------CETGGLVSFVDGWELNGQFFPSLEDHEKP 134 (410)
Q Consensus 65 ~SeeGef~F---~ssrs~Q~vCgiFFI~EPdq~IeItv~-~VdiP------C~~g~ll~~~DGWeLnGe~FPs~~DH~lp 134 (410)
....|.++- +..=+++..|.-.+-+.|+..|.|+|. .+++. |. -|.|.|.||= +
T Consensus 171 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~~f~le~~~~~~C~-~D~l~i~dg~---------------~ 234 (286)
T 1nt0_A 171 TGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCP-YDSLKIQTDK---------------R 234 (286)
T ss_dssp CSSSEEEECTTTTSCCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC----C---CEEEEECSS---------------C
T ss_pred cCCceEEeCCCCCCCCCCCCEEEEEEECCCceEEEEEEeceEEeccCCCCCCC-CcEEEEEeCC---------------c
Confidence 455666442 222236789997778899999999995 67764 43 5899999981 1
Q ss_pred chhhhhhhcCCCccceeeeeccceEEEEEeecC--CCCceEEEEeec
Q psy10936 135 LHERFTEFCGTKRIKTVFRSSQNAALIQYRVPT--RGKGFSFYVRYH 179 (410)
Q Consensus 135 l~eR~~efC~~~~~~~~~rSSQN~AliqyRvp~--~G~gF~~~vr~~ 179 (410)
.+-.||++... ..+.|+.|...|.|+=.. .++||.++.+..
T Consensus 235 ---~~~~~CG~~~p-~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~~ 277 (286)
T 1nt0_A 235 ---EYGPFCGKTLP-PRIETDSNKVTITFTTDESGNHTGWKIHYTST 277 (286)
T ss_dssp ---EEEEECBSSCC-CCEECSSSEEEEEEECCSCCCCCBCEEEEEEE
T ss_pred ---ceEEEcCCCCC-CCEEeeCCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence 23458998754 578999999999999765 478999988754
No 19
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=96.10 E-value=0.31 Score=45.74 Aligned_cols=82 Identities=22% Similarity=0.417 Sum_probs=58.1
Q ss_pred CceEEEEEecCCCCeEEEEEEee-c------CCCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCccceee
Q psy10936 80 PVACGVFLLTDPDKLVEVYFDYL-D------VPCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVF 152 (410)
Q Consensus 80 Q~vCgiFFI~EPdq~IeItv~~V-d------iPC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~ 152 (410)
+..|.-.+.+.++..|.|+|..+ + ..|. .|.|.+.||-.+-| .||++... ..+
T Consensus 190 ~~~C~w~i~~~~g~~i~l~f~~~~~~e~~~~~~C~-~D~l~i~dg~~~~~------------------~~cG~~~p-~~~ 249 (361)
T 4aqb_A 190 SSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCP-YDYIKIKVGPKVLG------------------PFCGEKAP-EPI 249 (361)
T ss_dssp SCEEEEEEECCTTCEEEEEECSCCBBCCCSSSSSS-SSEEEEEETTEEEE------------------EECBSSCC-CCE
T ss_pred CceeeEEeeeccCcEEEEEEeecccccCCccCccC-CCeEEEeeCCeeEE------------------eeCCCCCC-CCE
Confidence 45677666778888888888643 2 2343 47888888843322 47988754 678
Q ss_pred eeccceEEEEEeec--CCCCceEEEEeecCC
Q psy10936 153 RSSQNAALIQYRVP--TRGKGFSFYVRYHKN 181 (410)
Q Consensus 153 rSSQN~AliqyRvp--~~G~gF~~~vr~~~N 181 (410)
.|+.|...|.|+=- ..++||.++.+-..+
T Consensus 250 ~s~~n~~~i~F~SD~~~~~~GF~~~y~~~~~ 280 (361)
T 4aqb_A 250 STQSHSVLILFHSDNSGENRGWRLSYRAAGN 280 (361)
T ss_dssp ECSCSEEEEEEECCSCCCCCBCEEEEEEECC
T ss_pred eecCCeEEEEEEeCCCCCccceEEEEEEccC
Confidence 99999999999853 357799887766554
No 20
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=95.82 E-value=0.033 Score=54.77 Aligned_cols=91 Identities=21% Similarity=0.345 Sum_probs=68.6
Q ss_pred CCCceEEEEEecCCCCeEEEEEEeecCC----------CCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCc
Q psy10936 78 VEPVACGVFLLTDPDKLVEVYFDYLDVP----------CETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKR 147 (410)
Q Consensus 78 s~Q~vCgiFFI~EPdq~IeItv~~VdiP----------C~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~ 147 (410)
+++..|.--+.+.|+..|.|+|..+++. |. -|.|.|.||-.-+ -| .+-.||++..
T Consensus 29 p~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~-~D~l~i~dg~~~~-----------~~---~~~~~CG~~~ 93 (460)
T 2qqo_A 29 PHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCK-YDWLDIWDGIPHV-----------GP---LIGKYCGTKT 93 (460)
T ss_dssp CSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CC-SSEEEEESSSTTT-----------SC---EEEEECTTCC
T ss_pred CCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCC-CCEEEEEcCCCCC-----------Cc---ccceEeCCcC
Confidence 3578998777788899999999999874 54 5899999984211 12 2456899875
Q ss_pred cceeeeeccceEEEEEeecC--CCCceEEEEeecCCCCC
Q psy10936 148 IKTVFRSSQNAALIQYRVPT--RGKGFSFYVRYHKNPTP 184 (410)
Q Consensus 148 ~~~~~rSSQN~AliqyRvp~--~G~gF~~~vr~~~Np~P 184 (410)
. ..+.|+.|...|.|+=.. .++||.++.+....+.|
T Consensus 94 p-~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~ 131 (460)
T 2qqo_A 94 P-SELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPL 131 (460)
T ss_dssp C-CCEEECSSEEEEEEECCSSCCCCEEEEEEEEECC---
T ss_pred C-cCEEeeCCEEEEEEeccceeecCcEEEEEEEEecccc
Confidence 4 478999999999998764 47899999998876554
No 21
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=95.02 E-value=0.097 Score=51.18 Aligned_cols=93 Identities=18% Similarity=0.318 Sum_probs=69.4
Q ss_pred CCCceEEEEEecCCCCeEEEEEEeecC----------CCCCCCeEEEEeeeeEccccCCCCCCCCCcchhhhhhhcCCCc
Q psy10936 78 VEPVACGVFLLTDPDKLVEVYFDYLDV----------PCETGGLVSFVDGWELNGQFFPSLEDHEKPLHERFTEFCGTKR 147 (410)
Q Consensus 78 s~Q~vCgiFFI~EPdq~IeItv~~Vdi----------PC~~g~ll~~~DGWeLnGe~FPs~~DH~lpl~eR~~efC~~~~ 147 (410)
+++..|.-.+.+.|+..|.|+|..+++ .|. -|.|.|.||-.- .-|+ +-.||++..
T Consensus 32 p~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~-~D~l~i~dg~~~-----------~~~~---~~~~CG~~~ 96 (450)
T 2qqm_A 32 PNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCR-YDRLEIWDGFPD-----------VGPH---IGRYCGQKT 96 (450)
T ss_dssp CSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSC-SSEEEEESSSTT-----------TSCE---EEEECTTCC
T ss_pred CCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCC-CcEEEEecCCCC-----------CCcc---ceeecCCcC
Confidence 367899866677889999999999987 354 689999998421 1122 346899875
Q ss_pred cceeeeeccceEEEEEeecC--CCCceEEEEeecCC----CCCcc
Q psy10936 148 IKTVFRSSQNAALIQYRVPT--RGKGFSFYVRYHKN----PTPCN 186 (410)
Q Consensus 148 ~~~~~rSSQN~AliqyRvp~--~G~gF~~~vr~~~N----p~PCN 186 (410)
. ..+.|+.|...|.|+=.. .++||.++.+.... ++.|.
T Consensus 97 p-~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~~~~~C~ 140 (450)
T 2qqm_A 97 P-GRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCM 140 (450)
T ss_dssp C-CEEEECSSEEEEEEECCSSCCCCEEEEEEEECCCCCC--CCSC
T ss_pred C-CcEEEcCCEEEEEEEeCCccccCCeEEEEecccccccCCCccC
Confidence 4 569999999999998654 47899999888753 34575
No 22
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=91.03 E-value=2.3 Score=34.03 Aligned_cols=53 Identities=21% Similarity=0.424 Sum_probs=40.4
Q ss_pred ccccceee-cceeeEEeeCCCCCceeEEEEecCCCceEEEEeeeecCCCCCCCeee
Q psy10936 4 EDCMLVTS-KEGHFFYKSKSIEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVS 58 (410)
Q Consensus 4 ~rCm~m~S-~eG~FtF~~a~~pql~Ca~ffIaePd~~I~I~~d~vdIdCE~G~rra 58 (410)
..|-..+. ..|.+ +|+-.+.+.|--.+.+.|.+.|.++|..+|+.|..-+..+
T Consensus 7 ~~Cgg~l~~~~G~i--~SPYp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~i 60 (116)
T 1spp_B 7 DECGRVIKDTSGSI--SNTDRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVEV 60 (116)
T ss_dssp GGTTEEECCSEEEE--ECCSSCCSEEEEEEECCTTCEEEEEEEEEECCBTTEEEEE
T ss_pred CCCCCEEeCCceEE--eCCCcCCCCEEEEEEeCCCCEEEEEEeeCcccCCCCEEEE
Confidence 45655444 34654 4777788999999999999999999999999997644433
No 23
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=90.32 E-value=2.9 Score=33.22 Aligned_cols=53 Identities=19% Similarity=0.296 Sum_probs=40.2
Q ss_pred ccccceee-cceeeEEeeCCCCCceeEEEEecCCCceEEEEeeeecCCCCCCCeee
Q psy10936 4 EDCMLVTS-KEGHFFYKSKSIEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVS 58 (410)
Q Consensus 4 ~rCm~m~S-~eG~FtF~~a~~pql~Ca~ffIaePd~~I~I~~d~vdIdCE~G~rra 58 (410)
..|-..+. ..|. ++|+-.+.+.|--.+.+.|.+.|.++|..+++.|..-+..+
T Consensus 8 ~~Cgg~l~~~~G~--i~Spy~~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~i 61 (114)
T 1sfp_A 8 TNCGGILKEESGV--IATYYGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEI 61 (114)
T ss_dssp CSSCEEECCSEEE--EECCCSSCSEEEEEEECCTTCEEEEEEEEEECCTTTEEEEE
T ss_pred CCCCCeEECCcEE--EeCCCcCCCCEEEEEEeCCCCEEEEEEeeeeeecCCCEEEE
Confidence 34654443 3464 44677789999999999999999999999999997644433
No 24
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=82.80 E-value=2.7 Score=33.34 Aligned_cols=53 Identities=17% Similarity=0.146 Sum_probs=40.3
Q ss_pred cccccee-ecceeeEEeeCCCCCceeEEEEecCCCceEEEEeeeecCCCCCCCeee
Q psy10936 4 EDCMLVT-SKEGHFFYKSKSIEPVACGVFLLTDPDKLVEVYFDYLDVPCETGGLVS 58 (410)
Q Consensus 4 ~rCm~m~-S~eG~FtF~~a~~pql~Ca~ffIaePd~~I~I~~d~vdIdCE~G~rra 58 (410)
..|-..+ +..|.+ +|+-++.+.|--.+-+.|.+.|.++|..+++.|..-+..+
T Consensus 4 ~~Cgg~l~~~~G~i--~SPYp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~I 57 (109)
T 1spp_A 4 HACGGRLTDDYGTI--FTYKGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEV 57 (109)
T ss_dssp CSSCEEEECSEEEE--ECCCSSCSEEEEEEECCTTSEEEEEEEEEECCTTTEEEEE
T ss_pred cCCCCEEeCCcEEE--eCCCCCCCcEEEEEEcCCCCEEEEEEeeeeccCCCCEEEE
Confidence 4565444 345654 4677778999988999999999999999999997644433
No 25
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=77.71 E-value=28 Score=29.12 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=54.8
Q ss_pred cccccee-ecceeeEEeeCCC-----CCceeEEEEecCCCceEEEEeeeecCC----CCCCCeeeeeeeeeeecCcce--
Q psy10936 4 EDCMLVT-SKEGHFFYKSKSI-----EPVACGVFLLTDPDKLVEVYFDYLDVP----CETGGLVSVNCMLVTSKEGHF-- 71 (410)
Q Consensus 4 ~rCm~m~-S~eG~FtF~~a~~-----pql~Ca~ffIaePd~~I~I~~d~vdId----CE~G~rralrCmD~~SeeGef-- 71 (410)
..|-..+ +..| +++|+.- +.+.|--.+.+.|.+.|.|+|..+|+. |..-+..+ .|+.+.....
T Consensus 5 ~~Cgg~l~~~~G--~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~I---~dg~~~~~~~~~ 79 (149)
T 2wno_A 5 KECGGVFTDPKQ--IFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVEI---YDSYDDVHGFVG 79 (149)
T ss_dssp SCCCEEECSSEE--EEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCTTCCSSEEEE---ESSSSSSSSEEE
T ss_pred CCCCCEEECCce--EEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCCCCCCCEEEE---ecCCCCCcceee
Confidence 3454443 3345 4565543 468999888899999999999999986 44333222 3433221110
Q ss_pred EeeeC------CCCCceEEEEEecCC---CCeEEEEEEeecCCC
Q psy10936 72 FYKSK------SVEPVACGVFLLTDP---DKLVEVYFDYLDVPC 106 (410)
Q Consensus 72 ~F~ss------rs~Q~vCgiFFI~EP---dq~IeItv~~VdiPC 106 (410)
+|--. .+..+..-+.|..+. .++|.++|..++.+.
T Consensus 80 ~~CG~~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~~~~ 123 (149)
T 2wno_A 80 RYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMDPVS 123 (149)
T ss_dssp EECSSSCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEEECC--
T ss_pred eEcCCCCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEEECCCc
Confidence 11111 023344455554443 577888887777443
No 26
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=77.10 E-value=24 Score=28.93 Aligned_cols=27 Identities=19% Similarity=0.189 Sum_probs=24.4
Q ss_pred CCceeEEEEecCCCceEEEEeeeecCC
Q psy10936 24 EPVACGVFLLTDPDKLVEVYFDYLDVP 50 (410)
Q Consensus 24 pql~Ca~ffIaePd~~I~I~~d~vdId 50 (410)
+.+.|--.+-+.|.+.|.++|..+|+.
T Consensus 19 ~~~~C~w~I~~~~g~~I~l~f~~f~le 45 (159)
T 1nzi_A 19 SEVEKSWDIEVPEGYGIHLYFTHLDIE 45 (159)
T ss_dssp SSEEEEEEEECCTTEEEEEEEEEEECC
T ss_pred CCCCEEEEEEeCCCCEEEEEEeEEEec
Confidence 468999888899999999999999996
No 27
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=59.90 E-value=76 Score=26.52 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=30.4
Q ss_pred eeecceeeEEeeCC-----CCCceeEEEEecCCCceEEEEeeeecCC
Q psy10936 9 VTSKEGHFFYKSKS-----IEPVACGVFLLTDPDKLVEVYFDYLDVP 50 (410)
Q Consensus 9 m~S~eG~FtF~~a~-----~pql~Ca~ffIaePd~~I~I~~d~vdId 50 (410)
+++..|. ++|+. .+.+.|--.|-+.|.+.|.++|.++|+.
T Consensus 8 l~~~~G~--i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le 52 (170)
T 1szb_A 8 PEPVFGR--LASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLE 52 (170)
T ss_dssp CCCCEEE--EECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECC
T ss_pred EcCCCeE--EECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEcc
Confidence 3445564 44554 2468999888899999999999999996
No 28
>4b4p_A FEDF, F18 fimbrial adhesin AC; cell adhesion, fimbriae, bacterial adhesins, protein-carbohy interactions, ABH blood group binding, STEC; 1.80A {Escherichia coli k-12} PDB: 4b4q_A* 4b4r_A*
Probab=53.18 E-value=11 Score=32.87 Aligned_cols=44 Identities=30% Similarity=0.407 Sum_probs=37.6
Q ss_pred ceEEEEeecCCCCCcceecccccceeEEeecCccccceeeeeeeeE
Q psy10936 171 GFSFYVRYHKNPTPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQ 216 (410)
Q Consensus 171 gF~~~vr~~~Np~PCNil~~~~~~~yTl~n~g~~rNCSfsiiyPv~ 216 (410)
||.++.|..+|.+---+-+-+..|.|.|.| +..|-|-||.-|+-
T Consensus 106 gfeislrippnaqtyplssgdlkgsfsltn--kevnwsasiyvpai 149 (151)
T 4b4p_A 106 GFEISLRIPPNAQTYPLSSGDLKGSFSLTN--KEVNWSASIYVPAI 149 (151)
T ss_dssp EEEEEEECCGGGTTSCBC-CCEEEEEEEEC--SSCEEEEEEEEC--
T ss_pred eeEEEEEcCCCccccccccCccccceEeec--ceecceEEEEeeec
Confidence 999999999999988888999999999998 56799999988874
No 29
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=40.21 E-value=1.5e+02 Score=28.82 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=56.0
Q ss_pred cccccee-ecceeeEEeeCCC-----CCceeEEEEecCCCceEEEEeeeecCC----------CCCCCeeeeeeeeeeec
Q psy10936 4 EDCMLVT-SKEGHFFYKSKSI-----EPVACGVFLLTDPDKLVEVYFDYLDVP----------CETGGLVSVNCMLVTSK 67 (410)
Q Consensus 4 ~rCm~m~-S~eG~FtF~~a~~-----pql~Ca~ffIaePd~~I~I~~d~vdId----------CE~G~rralrCmD~~Se 67 (410)
+.|-..+ +..| +++||.- +.+.|--.+.+.|.+.|.++|..+|+. |..-+..+ .|+.+.
T Consensus 6 ~~Cg~~l~~~~G--~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i---~dg~~~ 80 (460)
T 2qqo_A 6 EDCSKNFTSPNG--TIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDI---WDGIPH 80 (460)
T ss_dssp -CCCEEECSSEE--EEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEE---ESSSTT
T ss_pred CCCCCEEeCCce--EEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEE---EcCCCC
Confidence 3465443 3456 4566543 468999888899999999999999995 43322222 343322
Q ss_pred Ccce--EeeeC------CCCCceEEEEEecCC---CCeEEEEEEeecC
Q psy10936 68 EGHF--FYKSK------SVEPVACGVFLLTDP---DKLVEVYFDYLDV 104 (410)
Q Consensus 68 eGef--~F~ss------rs~Q~vCgiFFI~EP---dq~IeItv~~Vdi 104 (410)
.+.. +|--. .++.+..-+.|..+. .++|.++|..++-
T Consensus 81 ~~~~~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~ 128 (460)
T 2qqo_A 81 VGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQ 128 (460)
T ss_dssp TSCEEEEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEECC
T ss_pred CCcccceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEEEec
Confidence 2210 01000 023445555665543 6899999998863
No 30
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=40.07 E-value=1.2e+02 Score=29.42 Aligned_cols=92 Identities=15% Similarity=0.210 Sum_probs=55.9
Q ss_pred ccccceee-cceeeEEeeCCC-----CCceeEEEEecCCCceEEEEeeeecCC----------CCCCCeeeeeeeeeeec
Q psy10936 4 EDCMLVTS-KEGHFFYKSKSI-----EPVACGVFLLTDPDKLVEVYFDYLDVP----------CETGGLVSVNCMLVTSK 67 (410)
Q Consensus 4 ~rCm~m~S-~eG~FtF~~a~~-----pql~Ca~ffIaePd~~I~I~~d~vdId----------CE~G~rralrCmD~~Se 67 (410)
..|-..+. ..| +++||.- +.+.|--.+.+.|.+.|.++|..+|+. |..-+..+ .|+.+.
T Consensus 9 ~~Cg~~~~~~~G--~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i---~dg~~~ 83 (450)
T 2qqm_A 9 PECSQNYTTPSG--VIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEI---WDGFPD 83 (450)
T ss_dssp CTTCEEECSSEE--EEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEE---ESSSTT
T ss_pred CCCCCeEeCCcE--EEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEE---ecCCCC
Confidence 34655443 345 4556543 469999888888999999999999994 54333333 343322
Q ss_pred Ccc-----------eEeeeCCCCCceEEEEEecCC---CCeEEEEEEeec
Q psy10936 68 EGH-----------FFYKSKSVEPVACGVFLLTDP---DKLVEVYFDYLD 103 (410)
Q Consensus 68 eGe-----------f~F~ssrs~Q~vCgiFFI~EP---dq~IeItv~~Vd 103 (410)
.+. ..+.+ +.+..-+.|..+. .++|.++|..+.
T Consensus 84 ~~~~~~~~CG~~~p~~i~S---~~n~l~v~F~Sd~~~~~~GF~~~y~~~~ 130 (450)
T 2qqm_A 84 VGPHIGRYCGQKTPGRIRS---SSGILSMVFYTDSAIAKEGFSANYSVLQ 130 (450)
T ss_dssp TSCEEEEECTTCCCCEEEE---CSSEEEEEEECCSSCCCCEEEEEEEECC
T ss_pred CCccceeecCCcCCCcEEE---cCCEEEEEEEeCCccccCCeEEEEeccc
Confidence 211 11222 3344455555544 789999999884
No 31
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=38.05 E-value=3.9 Score=34.70 Aligned_cols=64 Identities=22% Similarity=0.121 Sum_probs=36.0
Q ss_pred eeeEccccCCCCCCCCCcchhhhhhhcCCCccceeeeeccceEEEEEeecCCCCceEEEEeecCCCCC
Q psy10936 117 GWELNGQFFPSLEDHEKPLHERFTEFCGTKRIKTVFRSSQNAALIQYRVPTRGKGFSFYVRYHKNPTP 184 (410)
Q Consensus 117 GWeLnGe~FPs~~DH~lpl~eR~~efC~~~~~~~~~rSSQN~AliqyRvp~~G~gF~~~vr~~~Np~P 184 (410)
=|++||..||.-.||-++.-+= .=++.+.-..| ||+=--=.-=||-..|+-|+++=...-|-.|
T Consensus 26 ~~~InG~~y~av~~e~~~emg~---lsG~~rsLvvF-SsgYrP~r~D~Vv~~Gk~y~Vtr~~~~ngk~ 89 (102)
T 2pp6_A 26 KVNINGTDCIVVESDFLAELGP---VEGNGKNVVVF-SGNVIPRRGDRVVLRGSEFTVTRIRRFNGKP 89 (102)
T ss_dssp EEEETTEEEEEEEGGGTC-----------CEEEEEC-CSSCCCCTTCEEEETTEEEEEEEEEEETTEE
T ss_pred eEEECCEEeeeehhhhHHHhCC---ccCCceEEEEe-cCCcccCCCCEEEEcCcEEEEEEEEEECCcE
Confidence 3999999999999998876554 33455555667 6641100001233468888887665555443
No 32
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=24.95 E-value=2.4e+02 Score=21.73 Aligned_cols=45 Identities=18% Similarity=0.335 Sum_probs=31.6
Q ss_pred ccccce--eecceeeEEeeCC-----CCCceeEEEEecCCCceEEEEee-eecCC
Q psy10936 4 EDCMLV--TSKEGHFFYKSKS-----IEPVACGVFLLTDPDKLVEVYFD-YLDVP 50 (410)
Q Consensus 4 ~rCm~m--~S~eG~FtF~~a~-----~pql~Ca~ffIaePd~~I~I~~d-~vdId 50 (410)
+.|--. ++..|. ++|+. ++...|--.+.+.|.+.|.++|. .+++.
T Consensus 2 ~~Cgg~~~~~~~G~--i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le 54 (115)
T 3poj_A 2 VECSGNLFTQRTGT--ITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIE 54 (115)
T ss_dssp -CEEEEEECSSEEE--EECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBC
T ss_pred eECCCceEcCCCEE--EcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecc
Confidence 345433 345564 44554 24689998888999999999999 69985
No 33
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=20.24 E-value=4.6e+02 Score=23.26 Aligned_cols=137 Identities=15% Similarity=0.057 Sum_probs=69.2
Q ss_pred eEEEEEeecCCCCceEEEEeecCCCCCcceecccccceeEEeecCccccceeeee---------eeeEEEEec----CCC
Q psy10936 158 AALIQYRVPTRGKGFSFYVRYHKNPTPCNILLEGLSDVYTLRNYGKSVNCSLTTL---------YPAQVKVLS----GKG 224 (410)
Q Consensus 158 ~AliqyRvp~~G~gF~~~vr~~~Np~PCNil~~~~~~~yTl~n~g~~rNCSfsii---------yPv~i~i~~----~~~ 224 (410)
..+--||- .+|++..+-+.+..+..+ ..++|++.--....+++++|- |==.+.-.. ..-
T Consensus 32 ~~v~Wyrq-~~g~~~~~li~~~~~~~~-------~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~~~~~~~~~~~~ 103 (208)
T 4ei6_A 32 QYFWWYRQ-HSGEGPKALMSIFSDGDK-------KEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQGLT 103 (208)
T ss_dssp EEEEEEEE-CTTSCCEEEEECCSSEEE-------EETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEEEECCSSCCCCE
T ss_pred ceEEEEEe-CCCCCcEEEEEECCCCcc-------cCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEEecCCCcccccc
Confidence 34555664 466666655554443221 456777754334455666552 222222100 012
Q ss_pred CCCcceeecCCC-CCCCccchhccccccceeecccCccccceeeeeecceeeEEEeecccccc----cccccccceeecc
Q psy10936 225 ESQPFRERTSSP-QDNIPCNILLEGLSDVYTLRNYGKSVNCSLTTLYPAQVKVLSLGVGLSNS----KIKRNQDVEVETG 299 (410)
Q Consensus 225 ~~~~~r~r~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~nCsl~~l~pa~v~~l~Lg~g~~~~----~~k~~~~~~~~tg 299 (410)
-+.++||..... +.+-|.=-+++..+ -+...-|.+.-.|| ++.|.-.-.|+... -++.....--.-|
T Consensus 104 fG~GT~L~V~~~~~~~~PsVf~l~~~~-------~~~tl~Cl~~~f~P-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (208)
T 4ei6_A 104 FGLGTRVSVFPYIQNPDPAVYQLRDSK-------SSDKSVCLFTDFDS-QTNVSQSKDSDVYITDKCVLDMRSMDFKSNS 175 (208)
T ss_dssp ECCCEEEEEECCCSSCCCEEEEEEBSS-------CTTCEEEEEESCCT-TCCCCCCSSTTCEECCCEEEEEGGGTEEEEE
T ss_pred CCCCEEEEEeCcccCCCCEEEEcccCC-------CCceEEEEeeccCC-ceEeeecccCcEEEeCCEEEEEEecCCcccc
Confidence 356788876653 34455544444443 22456799999999 88776666655331 1112222222335
Q ss_pred eeeeccccccc
Q psy10936 300 TLHKADKRKFQ 310 (410)
Q Consensus 300 t~~~~d~~~~~ 310 (410)
.+.|-++.++.
T Consensus 176 ~~~~~~~~~~~ 186 (208)
T 4ei6_A 176 AVAWSNKSDFA 186 (208)
T ss_dssp EEEECCCTTCC
T ss_pred eEEEcCCCCch
Confidence 66666655443
Done!