Query psy10938
Match_columns 314
No_of_seqs 346 out of 1277
Neff 10.8
Searched_HMMs 46136
Date Fri Aug 16 22:20:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10938.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10938hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 4.7E-30 1E-34 236.6 25.8 301 13-313 152-741 (742)
2 KOG0253|consensus 100.0 3.4E-29 7.3E-34 204.9 20.1 303 10-313 60-527 (528)
3 PRK11551 putative 3-hydroxyphe 100.0 1.1E-27 2.3E-32 211.4 22.3 283 23-305 10-395 (406)
4 COG2814 AraJ Arabinose efflux 100.0 1.1E-26 2.3E-31 196.8 23.3 282 24-307 9-387 (394)
5 PRK09556 uhpT sugar phosphate 100.0 4.1E-27 8.8E-32 211.1 21.8 292 14-305 15-448 (467)
6 PRK03545 putative arabinose tr 100.0 1.6E-26 3.4E-31 202.8 23.7 279 26-305 7-379 (390)
7 PRK03699 putative transporter; 100.0 1.6E-26 3.4E-31 203.0 21.8 282 25-307 4-381 (394)
8 PRK09705 cynX putative cyanate 100.0 1.5E-26 3.2E-31 203.0 21.4 282 27-312 9-388 (393)
9 COG2271 UhpC Sugar phosphate p 100.0 1.1E-26 2.3E-31 194.6 18.7 282 22-303 23-431 (448)
10 PRK05122 major facilitator sup 99.9 4.3E-26 9.3E-31 200.7 22.7 284 28-313 15-396 (399)
11 TIGR00898 2A0119 cation transp 99.9 1.3E-26 2.8E-31 210.1 19.7 265 49-314 110-503 (505)
12 TIGR00890 2A0111 Oxalate/Forma 99.9 4.8E-27 1.1E-31 204.7 16.0 265 34-298 9-374 (377)
13 PRK12307 putative sialic acid 99.9 1.3E-25 2.7E-30 199.4 23.9 263 23-285 13-386 (426)
14 TIGR00891 2A0112 putative sial 99.9 1.2E-25 2.5E-30 198.1 21.1 264 22-285 6-393 (405)
15 PRK03633 putative MFS family t 99.9 3.7E-25 8E-30 193.5 23.8 273 30-305 8-371 (381)
16 PRK10642 proline/glycine betai 99.9 1.2E-24 2.7E-29 196.1 26.9 286 27-312 15-436 (490)
17 PRK11663 regulatory protein Uh 99.9 7.5E-25 1.6E-29 194.7 23.8 287 23-310 18-429 (434)
18 TIGR00887 2A0109 phosphate:H+ 99.9 6E-25 1.3E-29 198.8 22.4 299 16-314 4-497 (502)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.9 5.7E-25 1.2E-29 194.0 20.6 261 24-284 4-397 (412)
20 PRK09952 shikimate transporter 99.9 4.8E-24 1E-28 189.6 26.1 284 25-309 19-436 (438)
21 PRK10406 alpha-ketoglutarate t 99.9 8.7E-25 1.9E-29 194.2 20.8 287 24-312 18-429 (432)
22 TIGR00879 SP MFS transporter, 99.9 1.1E-24 2.4E-29 195.8 21.2 285 29-313 29-478 (481)
23 PRK12382 putative transporter; 99.9 1.3E-24 2.9E-29 190.8 20.8 273 30-304 17-387 (392)
24 PRK10077 xylE D-xylose transpo 99.9 1.9E-24 4E-29 194.8 20.7 291 23-313 7-465 (479)
25 PRK11273 glpT sn-glycerol-3-ph 99.9 1.1E-23 2.3E-28 188.3 23.7 288 23-311 24-442 (452)
26 PRK03893 putative sialic acid 99.9 4E-24 8.6E-29 193.5 20.6 270 23-292 15-439 (496)
27 cd06174 MFS The Major Facilita 99.9 1.2E-23 2.6E-28 181.5 22.4 271 33-303 4-349 (352)
28 PRK09874 drug efflux system pr 99.9 2.1E-23 4.6E-28 184.1 22.5 273 32-304 18-396 (408)
29 PRK10091 MFS transport protein 99.9 1.3E-23 2.7E-28 183.9 20.8 274 30-305 5-375 (382)
30 PLN00028 nitrate transmembrane 99.9 2.2E-23 4.9E-28 187.0 22.8 286 16-305 24-432 (476)
31 PRK15034 nitrate/nitrite trans 99.9 7.8E-23 1.7E-27 179.1 25.5 281 25-305 31-453 (462)
32 PRK15075 citrate-proton sympor 99.9 2.6E-23 5.7E-28 184.9 22.3 259 26-284 13-396 (434)
33 PRK14995 methyl viologen resis 99.9 9.6E-24 2.1E-28 190.5 19.6 256 26-281 4-412 (495)
34 TIGR00903 2A0129 major facilit 99.9 9.9E-24 2.1E-28 182.8 18.7 264 40-308 3-367 (368)
35 PRK10213 nepI ribonucleoside t 99.9 7E-23 1.5E-27 179.7 24.2 272 26-298 18-383 (394)
36 TIGR00895 2A0115 benzoate tran 99.9 6.2E-23 1.3E-27 180.2 23.5 261 19-279 8-397 (398)
37 TIGR00893 2A0114 d-galactonate 99.9 1.3E-23 2.8E-28 184.2 18.1 265 37-302 3-395 (399)
38 KOG0252|consensus 99.9 3.3E-24 7.2E-29 180.7 12.5 293 22-314 35-506 (538)
39 PRK10489 enterobactin exporter 99.9 1.5E-23 3.3E-28 185.5 17.3 277 37-313 26-407 (417)
40 KOG0569|consensus 99.9 8.9E-23 1.9E-27 178.0 21.6 284 30-313 13-462 (485)
41 PRK15402 multidrug efflux syst 99.9 1.3E-22 2.8E-27 179.0 22.5 267 24-291 9-379 (406)
42 TIGR00899 2A0120 sugar efflux 99.9 1.5E-22 3.3E-27 176.6 22.4 270 36-306 5-374 (375)
43 PRK10504 putative transporter; 99.9 2.7E-22 5.8E-27 180.4 24.4 256 29-284 11-417 (471)
44 COG2223 NarK Nitrate/nitrite t 99.9 3.1E-22 6.7E-27 168.1 22.3 283 22-305 8-400 (417)
45 PRK10133 L-fucose transporter; 99.9 2.2E-22 4.7E-27 178.6 22.1 268 24-294 22-421 (438)
46 TIGR00900 2A0121 H+ Antiporter 99.9 7.6E-23 1.7E-27 177.6 18.8 251 34-284 5-365 (365)
47 TIGR00710 efflux_Bcr_CflA drug 99.9 3.7E-22 8E-27 174.7 22.9 254 30-284 7-363 (385)
48 TIGR00889 2A0110 nucleoside tr 99.9 6E-22 1.3E-26 174.9 22.4 276 35-310 9-407 (418)
49 TIGR00897 2A0118 polyol permea 99.9 6.8E-22 1.5E-26 174.1 21.5 255 49-305 34-400 (402)
50 TIGR00711 efflux_EmrB drug res 99.9 8.9E-22 1.9E-26 177.7 21.1 254 29-282 3-410 (485)
51 TIGR00894 2A0114euk Na(+)-depe 99.9 3.5E-21 7.6E-26 172.8 24.7 283 22-305 13-449 (465)
52 TIGR00892 2A0113 monocarboxyla 99.9 8E-22 1.7E-26 176.1 20.0 280 21-300 12-415 (455)
53 TIGR00902 2A0127 phenyl propri 99.9 2.6E-21 5.7E-26 169.2 22.6 267 33-302 9-375 (382)
54 TIGR00881 2A0104 phosphoglycer 99.9 6.5E-22 1.4E-26 172.5 17.8 251 35-285 2-375 (379)
55 PRK10054 putative transporter; 99.9 1.2E-21 2.6E-26 171.9 19.0 262 35-297 14-375 (395)
56 TIGR00712 glpT glycerol-3-phos 99.9 1.9E-21 4E-26 173.2 19.8 284 25-309 24-437 (438)
57 PRK15011 sugar efflux transpor 99.9 1.5E-20 3.2E-25 165.2 24.2 270 36-307 23-392 (393)
58 PRK11652 emrD multidrug resist 99.9 1.2E-20 2.5E-25 165.9 23.2 258 26-284 6-362 (394)
59 PRK11043 putative transporter; 99.9 1.3E-20 2.8E-25 166.0 23.3 247 37-284 15-359 (401)
60 PRK10473 multidrug efflux syst 99.9 1.2E-20 2.5E-25 165.8 21.5 245 35-284 10-351 (392)
61 PF07690 MFS_1: Major Facilita 99.9 2.3E-21 5.1E-26 167.5 16.0 240 34-273 2-352 (352)
62 PRK09528 lacY galactoside perm 99.9 1.1E-20 2.4E-25 167.4 20.7 270 35-304 17-401 (420)
63 TIGR00885 fucP L-fucose:H+ sym 99.9 2.6E-20 5.6E-25 164.0 21.7 251 30-283 5-382 (410)
64 PRK11195 lysophospholipid tran 99.9 2.6E-20 5.7E-25 163.4 19.7 265 33-302 8-376 (393)
65 KOG1330|consensus 99.9 6.1E-21 1.3E-25 161.7 14.8 260 24-283 29-413 (493)
66 TIGR00896 CynX cyanate transpo 99.9 7.7E-21 1.7E-25 164.8 15.9 239 45-285 17-351 (355)
67 PF05977 MFS_3: Transmembrane 99.9 4.2E-20 9.1E-25 165.6 20.2 278 28-305 10-393 (524)
68 PRK11102 bicyclomycin/multidru 99.9 6E-20 1.3E-24 160.4 19.8 235 42-277 5-344 (377)
69 PRK11646 multidrug resistance 99.9 7.3E-20 1.6E-24 161.0 20.2 266 36-301 18-383 (400)
70 TIGR00883 2A0106 metabolite-pr 99.8 3.1E-20 6.8E-25 162.8 16.5 245 38-284 3-377 (394)
71 PRK11128 putative 3-phenylprop 99.8 4.4E-19 9.5E-24 155.3 22.1 262 37-301 13-374 (382)
72 KOG0254|consensus 99.8 2.9E-19 6.2E-24 162.0 20.6 286 28-314 45-492 (513)
73 PF00083 Sugar_tr: Sugar (and 99.8 8.2E-24 1.8E-28 189.2 -9.2 279 34-314 6-445 (451)
74 TIGR00886 2A0108 nitrite extru 99.8 9.2E-20 2E-24 158.6 16.4 238 31-269 4-366 (366)
75 TIGR00882 2A0105 oligosacchari 99.8 9.6E-19 2.1E-23 153.9 21.7 272 32-303 6-392 (396)
76 PRK15403 multidrug efflux syst 99.8 6.8E-19 1.5E-23 155.4 20.8 264 34-298 22-389 (413)
77 KOG0255|consensus 99.8 9.2E-19 2E-23 159.4 21.5 258 56-313 111-500 (521)
78 KOG2504|consensus 99.8 1.1E-19 2.3E-24 162.3 13.7 286 21-306 39-476 (509)
79 PF03825 Nuc_H_symport: Nucleo 99.8 4.8E-18 1E-22 148.1 22.8 251 34-284 8-366 (400)
80 COG0738 FucP Fucose permease [ 99.8 1.1E-18 2.3E-23 146.0 17.4 267 28-297 13-400 (422)
81 PRK11010 ampG muropeptide tran 99.8 1.6E-17 3.5E-22 149.6 21.2 276 30-307 14-404 (491)
82 KOG2615|consensus 99.8 3.3E-18 7.2E-23 141.6 13.6 226 58-283 63-415 (451)
83 KOG4686|consensus 99.8 2E-18 4.2E-23 137.5 9.5 278 26-305 42-442 (459)
84 PRK08633 2-acyl-glycerophospho 99.8 5.6E-17 1.2E-21 160.8 21.5 236 46-281 28-383 (1146)
85 COG2807 CynX Cyanate permease 99.8 1.1E-16 2.4E-21 132.1 18.1 275 27-303 11-382 (395)
86 TIGR00792 gph sugar (Glycoside 99.7 8.6E-17 1.9E-21 143.4 18.2 236 49-284 21-382 (437)
87 PF01306 LacY_symp: LacY proto 99.7 2.6E-16 5.6E-21 135.2 18.8 144 167-310 259-405 (412)
88 TIGR00924 yjdL_sub1_fam amino 99.7 4E-16 8.7E-21 139.9 20.9 275 30-304 12-466 (475)
89 KOG2532|consensus 99.7 2.3E-16 5E-21 139.3 18.7 250 55-305 65-446 (466)
90 PRK06814 acylglycerophosphoeth 99.7 1.9E-16 4E-21 156.9 20.1 253 31-283 18-397 (1140)
91 KOG3764|consensus 99.7 7.3E-17 1.6E-21 134.4 12.5 248 56-303 99-451 (464)
92 TIGR02718 sider_RhtX_FptX side 99.7 1.5E-15 3.4E-20 133.3 21.7 271 30-300 3-385 (390)
93 PRK11902 ampG muropeptide tran 99.7 1.7E-15 3.6E-20 133.6 20.9 267 34-306 5-390 (402)
94 COG2270 Permeases of the major 99.7 1.3E-15 2.8E-20 128.6 15.5 153 160-312 281-435 (438)
95 PRK10207 dipeptide/tripeptide 99.7 1.5E-14 3.2E-19 130.1 20.6 252 28-279 14-438 (489)
96 PF11700 ATG22: Vacuole efflux 99.6 3.5E-14 7.6E-19 126.3 20.7 152 160-311 310-473 (477)
97 PTZ00207 hypothetical protein; 99.6 3.8E-14 8.2E-19 128.1 19.0 106 24-131 24-135 (591)
98 PF06609 TRI12: Fungal trichot 99.6 3.9E-14 8.5E-19 127.3 18.7 244 37-281 53-466 (599)
99 TIGR00901 2A0125 AmpG-related 99.6 9.4E-15 2E-19 126.7 14.3 220 45-266 5-355 (356)
100 KOG2533|consensus 99.6 4.9E-14 1.1E-18 125.0 18.7 251 26-276 43-424 (495)
101 PRK09584 tppB putative tripept 99.6 6.4E-14 1.4E-18 126.5 19.3 246 32-277 25-439 (500)
102 TIGR01301 GPH_sucrose GPH fami 99.6 2.4E-13 5.3E-18 120.4 20.5 139 172-310 310-476 (477)
103 TIGR00806 rfc RFC reduced fola 99.6 1.2E-13 2.7E-18 119.8 15.8 157 43-216 41-201 (511)
104 TIGR00805 oat sodium-independe 99.5 2.2E-13 4.8E-18 125.9 16.7 149 31-194 36-235 (633)
105 PRK09669 putative symporter Ya 99.5 5.2E-13 1.1E-17 119.3 18.6 236 49-284 31-390 (444)
106 TIGR00788 fbt folate/biopterin 99.5 4.3E-13 9.2E-18 120.2 16.2 257 27-284 25-415 (468)
107 PF13347 MFS_2: MFS/sugar tran 99.5 4.7E-13 1E-17 119.0 16.4 235 49-284 23-386 (428)
108 PRK09848 glucuronide transport 99.5 1.7E-12 3.6E-17 116.2 20.0 110 174-283 271-389 (448)
109 TIGR00710 efflux_Bcr_CflA drug 99.4 2.7E-12 6E-17 112.3 14.6 146 165-310 38-185 (385)
110 TIGR00900 2A0121 H+ Antiporter 99.4 3.8E-12 8.3E-17 110.4 15.2 140 165-304 32-177 (365)
111 PF07690 MFS_1: Major Facilita 99.4 3.7E-12 8E-17 110.0 14.3 138 164-301 29-167 (352)
112 TIGR01299 synapt_SV2 synaptic 99.4 2.2E-11 4.7E-16 113.6 19.8 144 165-308 200-357 (742)
113 TIGR00893 2A0114 d-galactonate 99.4 3.5E-12 7.7E-17 111.7 14.0 146 163-308 25-172 (399)
114 PRK03545 putative arabinose tr 99.4 4.9E-12 1.1E-16 111.2 14.8 144 165-308 42-187 (390)
115 PRK10213 nepI ribonucleoside t 99.4 5.8E-12 1.3E-16 110.7 15.0 144 165-308 53-198 (394)
116 PRK10429 melibiose:sodium symp 99.4 9.3E-12 2E-16 112.1 16.5 118 167-284 266-395 (473)
117 TIGR02332 HpaX 4-hydroxyphenyl 99.4 8.4E-12 1.8E-16 110.4 15.8 145 165-309 41-193 (412)
118 TIGR00880 2_A_01_02 Multidrug 99.4 7E-12 1.5E-16 93.2 12.9 131 175-305 6-137 (141)
119 PRK11102 bicyclomycin/multidru 99.4 7.1E-12 1.5E-16 109.6 14.7 146 163-308 22-169 (377)
120 PRK11195 lysophospholipid tran 99.4 6.5E-12 1.4E-16 110.4 13.7 141 165-308 36-176 (393)
121 PRK10054 putative transporter; 99.4 6.8E-12 1.5E-16 110.4 13.7 144 165-308 41-185 (395)
122 PRK15403 multidrug efflux syst 99.4 1.5E-11 3.2E-16 108.9 15.2 145 165-309 49-195 (413)
123 PRK10473 multidrug efflux syst 99.4 1.3E-11 2.9E-16 108.5 14.8 145 165-309 36-182 (392)
124 TIGR00711 efflux_EmrB drug res 99.4 5.9E-12 1.3E-16 113.8 12.6 144 165-308 35-180 (485)
125 PRK11663 regulatory protein Uh 99.4 1E-11 2.2E-16 110.7 13.6 143 165-307 56-200 (434)
126 PRK11646 multidrug resistance 99.4 2.2E-11 4.8E-16 107.3 15.4 143 165-307 44-187 (400)
127 PRK10091 MFS transport protein 99.4 1.6E-11 3.5E-16 107.5 14.4 145 165-309 36-182 (382)
128 TIGR00891 2A0112 putative sial 99.4 1.6E-11 3.5E-16 108.1 14.0 144 165-308 45-191 (405)
129 KOG2563|consensus 99.4 3.4E-11 7.4E-16 102.7 15.1 283 22-305 39-449 (480)
130 PRK14995 methyl viologen resis 99.4 2.8E-11 6.2E-16 109.6 15.6 144 165-308 39-185 (495)
131 PRK11551 putative 3-hydroxyphe 99.4 1.3E-11 2.8E-16 109.0 13.1 144 165-308 48-193 (406)
132 TIGR00903 2A0129 major facilit 99.3 3.2E-11 6.9E-16 104.8 15.2 145 164-309 23-169 (368)
133 TIGR01272 gluP glucose/galacto 99.3 4.5E-10 9.8E-15 95.3 20.6 124 163-289 174-298 (310)
134 PRK15402 multidrug efflux syst 99.3 4.5E-11 9.8E-16 105.6 14.9 145 165-309 46-192 (406)
135 TIGR00895 2A0115 benzoate tran 99.3 1.4E-11 3.1E-16 108.1 11.2 144 165-308 50-195 (398)
136 KOG3764|consensus 99.3 1E-11 2.3E-16 104.1 9.4 141 165-305 104-246 (464)
137 TIGR00898 2A0119 cation transp 99.3 5.2E-11 1.1E-15 108.3 14.4 141 166-308 126-266 (505)
138 PRK10504 putative transporter; 99.3 8.1E-11 1.7E-15 106.1 15.4 140 165-304 43-183 (471)
139 TIGR00881 2A0104 phosphoglycer 99.3 1.3E-11 2.8E-16 107.7 9.7 145 163-307 26-173 (379)
140 KOG2615|consensus 99.3 1.1E-11 2.4E-16 103.3 8.4 116 165-281 66-181 (451)
141 KOG3762|consensus 99.3 2E-12 4.3E-17 112.2 4.1 129 175-303 414-544 (618)
142 cd06174 MFS The Major Facilita 99.3 4.8E-11 1E-15 102.8 12.8 137 165-301 32-169 (352)
143 COG2814 AraJ Arabinose efflux 99.3 1.2E-10 2.6E-15 99.5 14.7 144 163-306 44-189 (394)
144 PRK11043 putative transporter; 99.3 1E-10 2.2E-15 103.2 14.8 143 165-307 39-182 (401)
145 PRK15462 dipeptide/tripeptide 99.3 1.8E-10 3.9E-15 102.7 16.2 170 30-214 11-185 (493)
146 PRK12307 putative sialic acid 99.3 7.3E-11 1.6E-15 104.9 13.9 126 165-290 51-177 (426)
147 TIGR00924 yjdL_sub1_fam amino 99.3 7.1E-11 1.5E-15 106.2 13.8 140 165-304 46-190 (475)
148 PRK03699 putative transporter; 99.3 2E-10 4.2E-15 101.2 16.0 139 165-303 40-180 (394)
149 TIGR00887 2A0109 phosphate:H+ 99.3 1.3E-10 2.8E-15 105.5 14.9 115 166-280 55-175 (502)
150 PRK11652 emrD multidrug resist 99.3 1.5E-10 3.3E-15 101.8 14.8 145 165-309 41-187 (394)
151 PRK10077 xylE D-xylose transpo 99.3 1.5E-10 3.2E-15 104.6 14.7 145 165-309 53-218 (479)
152 TIGR00894 2A0114euk Na(+)-depe 99.3 8.8E-11 1.9E-15 105.7 13.0 144 162-305 71-218 (465)
153 PRK09705 cynX putative cyanate 99.2 2E-10 4.3E-15 101.1 14.7 118 165-283 42-159 (393)
154 PRK03893 putative sialic acid 99.2 1.6E-10 3.4E-15 104.9 14.2 123 165-287 53-175 (496)
155 PRK10489 enterobactin exporter 99.2 9E-11 2E-15 104.1 12.3 144 165-308 50-199 (417)
156 COG2211 MelB Na+/melibiose sym 99.2 1.4E-09 3.1E-14 94.9 18.9 234 51-284 36-398 (467)
157 COG2271 UhpC Sugar phosphate p 99.2 2.3E-11 5E-16 103.1 7.4 145 161-305 58-205 (448)
158 KOG2325|consensus 99.2 9.7E-12 2.1E-16 108.6 5.3 110 22-131 28-145 (488)
159 TIGR00902 2A0127 phenyl propri 99.2 2.2E-10 4.9E-15 100.3 13.9 149 47-211 224-372 (382)
160 PRK12382 putative transporter; 99.2 2.4E-10 5.1E-15 100.6 13.8 124 164-287 48-179 (392)
161 PRK15462 dipeptide/tripeptide 99.2 2.3E-10 4.9E-15 102.1 13.6 138 165-302 43-185 (493)
162 PLN00028 nitrate transmembrane 99.2 5.8E-10 1.2E-14 100.5 16.3 145 160-305 64-218 (476)
163 PRK05122 major facilitator sup 99.2 1.6E-10 3.5E-15 101.8 12.5 123 165-287 49-179 (399)
164 PRK03633 putative MFS family t 99.2 4.8E-10 1E-14 98.2 15.0 119 165-283 39-157 (381)
165 TIGR00890 2A0111 Oxalate/Forma 99.2 2E-10 4.4E-15 100.0 12.6 138 165-303 36-174 (377)
166 TIGR00879 SP MFS transporter, 99.2 2.6E-10 5.7E-15 102.5 13.6 144 165-308 69-219 (481)
167 PRK09874 drug efflux system pr 99.2 4.8E-10 1E-14 99.1 14.9 138 169-307 56-195 (408)
168 TIGR00899 2A0120 sugar efflux 99.2 4.5E-10 9.6E-15 98.0 14.4 144 165-308 31-179 (375)
169 TIGR00806 rfc RFC reduced fola 99.2 5.8E-10 1.2E-14 97.3 14.3 146 161-308 55-205 (511)
170 PRK11462 putative transporter; 99.2 1.6E-09 3.5E-14 97.1 17.6 233 51-283 33-388 (460)
171 TIGR00886 2A0108 nitrite extru 99.2 5.6E-10 1.2E-14 97.1 14.3 116 165-281 35-151 (366)
172 PRK15011 sugar efflux transpor 99.2 5.5E-10 1.2E-14 98.3 14.1 152 50-217 238-390 (393)
173 PRK15034 nitrate/nitrite trans 99.2 1E-09 2.2E-14 97.0 15.5 119 161-280 64-187 (462)
174 PRK10642 proline/glycine betai 99.2 5.1E-10 1.1E-14 101.3 14.0 136 173-308 63-215 (490)
175 KOG1330|consensus 99.2 7E-12 1.5E-16 107.2 1.7 148 162-309 63-213 (493)
176 TIGR00892 2A0113 monocarboxyla 99.2 5E-10 1.1E-14 100.4 13.6 140 165-305 52-193 (455)
177 PRK10406 alpha-ketoglutarate t 99.2 6.1E-10 1.3E-14 99.2 13.8 137 172-308 68-221 (432)
178 TIGR00897 2A0118 polyol permea 99.2 8.1E-10 1.8E-14 97.5 14.5 120 165-284 46-170 (402)
179 COG3104 PTR2 Dipeptide/tripept 99.2 1.8E-08 3.9E-13 87.7 21.9 251 55-305 53-486 (498)
180 TIGR00712 glpT glycerol-3-phos 99.2 3.2E-10 7E-15 101.2 11.5 143 165-307 59-208 (438)
181 TIGR00885 fucP L-fucose:H+ sym 99.1 1.8E-09 4E-14 95.4 15.7 116 165-280 36-154 (410)
182 PF05631 DUF791: Protein of un 99.1 3E-09 6.5E-14 89.2 15.7 223 47-281 53-303 (354)
183 PRK10207 dipeptide/tripeptide 99.1 8.4E-10 1.8E-14 99.5 13.4 132 165-296 48-184 (489)
184 TIGR00896 CynX cyanate transpo 99.1 2E-09 4.3E-14 93.4 15.0 120 162-283 30-149 (355)
185 PRK09556 uhpT sugar phosphate 99.1 2.7E-10 5.9E-15 102.5 9.2 139 165-303 62-209 (467)
186 KOG0255|consensus 99.1 1.6E-09 3.5E-14 98.9 14.0 143 165-309 116-258 (521)
187 PRK09528 lacY galactoside perm 99.1 9.5E-10 2.1E-14 97.7 11.9 142 56-211 255-396 (420)
188 PRK11273 glpT sn-glycerol-3-ph 99.1 1.8E-09 4E-14 96.7 13.5 144 165-308 61-211 (452)
189 PF05977 MFS_3: Transmembrane 99.1 3.5E-09 7.5E-14 95.6 14.6 141 165-305 43-189 (524)
190 TIGR00880 2_A_01_02 Multidrug 99.1 7.4E-10 1.6E-14 82.1 8.5 133 67-214 2-134 (141)
191 PRK09952 shikimate transporter 99.1 3.1E-09 6.7E-14 94.9 13.8 123 175-297 72-211 (438)
192 PRK11128 putative 3-phenylprop 99.1 1.8E-09 4E-14 94.6 12.0 131 51-197 228-359 (382)
193 KOG2532|consensus 99.0 8E-09 1.7E-13 91.8 15.1 143 163-305 69-215 (466)
194 COG2223 NarK Nitrate/nitrite t 99.0 7.7E-09 1.7E-13 88.0 13.9 139 163-303 45-190 (417)
195 PRK08633 2-acyl-glycerophospho 99.0 4.7E-09 1E-13 104.8 14.9 116 167-282 47-165 (1146)
196 PRK06814 acylglycerophosphoeth 99.0 4.7E-09 1E-13 104.7 14.8 141 168-308 53-197 (1140)
197 PRK11902 ampG muropeptide tran 99.0 8.4E-09 1.8E-13 91.1 14.6 144 163-308 30-184 (402)
198 KOG0254|consensus 99.0 9.2E-09 2E-13 93.7 14.3 141 168-309 90-233 (513)
199 PRK15075 citrate-proton sympor 99.0 7.8E-09 1.7E-13 92.2 13.5 103 178-280 67-177 (434)
200 TIGR00889 2A0110 nucleoside tr 99.0 3.4E-09 7.4E-14 93.9 11.0 148 49-211 229-395 (418)
201 PRK09584 tppB putative tripept 99.0 9.4E-09 2E-13 93.1 13.8 134 165-298 55-193 (500)
202 TIGR00883 2A0106 metabolite-pr 99.0 1.2E-08 2.5E-13 89.5 13.7 103 178-280 46-156 (394)
203 TIGR00901 2A0125 AmpG-related 99.0 1.5E-08 3.3E-13 87.9 14.0 144 163-308 19-181 (356)
204 PRK10133 L-fucose transporter; 99.0 4.5E-08 9.8E-13 87.3 16.5 121 160-280 54-177 (438)
205 TIGR00882 2A0105 oligosacchari 99.0 1.9E-08 4.2E-13 88.6 14.1 142 58-214 249-391 (396)
206 TIGR00805 oat sodium-independe 98.9 2E-09 4.4E-14 99.8 8.0 143 165-307 66-282 (633)
207 PF06779 DUF1228: Protein of u 98.9 2.9E-09 6.4E-14 70.2 6.1 81 40-120 4-84 (85)
208 KOG2816|consensus 98.9 2.4E-07 5.2E-12 82.2 19.1 120 163-283 273-393 (463)
209 PTZ00207 hypothetical protein; 98.9 8.4E-08 1.8E-12 87.4 15.0 120 182-303 76-202 (591)
210 PRK11010 ampG muropeptide tran 98.8 9.4E-08 2E-12 86.5 14.6 127 182-308 60-197 (491)
211 PF03209 PUCC: PUCC protein; 98.8 1.8E-06 3.8E-11 74.0 20.4 124 160-283 237-364 (403)
212 KOG0569|consensus 98.8 1.2E-07 2.6E-12 83.9 13.6 141 170-310 63-209 (485)
213 TIGR01272 gluP glucose/galacto 98.8 2.3E-07 5E-12 78.8 13.9 127 57-201 172-298 (310)
214 TIGR01301 GPH_sucrose GPH fami 98.7 1.9E-07 4.1E-12 83.2 13.1 144 165-308 37-221 (477)
215 TIGR02718 sider_RhtX_FptX side 98.7 1.7E-07 3.7E-12 82.4 12.8 146 50-209 230-382 (390)
216 COG3104 PTR2 Dipeptide/tripept 98.7 1E-07 2.2E-12 83.1 9.8 144 163-306 57-206 (498)
217 PF03137 OATP: Organic Anion T 98.7 4.3E-09 9.2E-14 95.4 0.1 79 34-112 9-87 (539)
218 COG0738 FucP Fucose permease [ 98.7 1.9E-06 4E-11 73.4 15.6 117 165-281 46-165 (422)
219 PF11700 ATG22: Vacuole efflux 98.6 1.2E-06 2.6E-11 78.5 14.9 158 46-218 300-468 (477)
220 KOG2533|consensus 98.6 3.1E-07 6.7E-12 82.1 10.6 145 164-308 78-230 (495)
221 PF06609 TRI12: Fungal trichot 98.6 6.5E-07 1.4E-11 81.3 12.3 131 169-300 80-211 (599)
222 PF12832 MFS_1_like: MFS_1 lik 98.6 1.8E-07 4E-12 61.2 5.9 70 34-103 6-75 (77)
223 PF00083 Sugar_tr: Sugar (and 98.6 5.2E-10 1.1E-14 100.2 -8.7 142 167-308 46-194 (451)
224 PF01306 LacY_symp: LacY proto 98.5 2.6E-06 5.5E-11 74.1 13.9 155 37-208 234-390 (412)
225 TIGR00792 gph sugar (Glycoside 98.5 1.2E-06 2.6E-11 78.2 12.5 146 163-308 31-197 (437)
226 KOG2504|consensus 98.5 2.9E-06 6.3E-11 76.6 13.3 142 163-305 77-220 (509)
227 PF13347 MFS_2: MFS/sugar tran 98.5 1.9E-06 4E-11 76.9 12.1 152 36-195 233-386 (428)
228 KOG0252|consensus 98.5 7.3E-07 1.6E-11 76.9 8.4 112 165-276 82-200 (538)
229 PF06813 Nodulin-like: Nodulin 98.4 2.9E-05 6.3E-10 63.2 16.1 103 27-131 2-111 (250)
230 PF03825 Nuc_H_symport: Nucleo 98.4 7.3E-06 1.6E-10 72.0 12.4 149 38-200 217-371 (400)
231 TIGR00788 fbt folate/biopterin 98.4 4E-06 8.7E-11 75.5 10.9 143 165-309 59-212 (468)
232 KOG2816|consensus 98.4 6.8E-06 1.5E-10 73.1 12.1 133 175-310 70-204 (463)
233 COG2807 CynX Cyanate permease 98.3 2.8E-05 6.1E-10 65.4 14.1 140 163-304 43-184 (395)
234 PF03092 BT1: BT1 family; Int 98.3 2.3E-05 5E-10 69.8 13.5 145 164-308 252-415 (433)
235 PRK09848 glucuronide transport 98.3 4.5E-05 9.7E-10 68.5 15.6 141 49-197 249-392 (448)
236 KOG3626|consensus 98.3 2.3E-05 4.9E-10 72.3 13.4 85 28-112 97-181 (735)
237 PRK10429 melibiose:sodium symp 98.2 3.7E-05 8E-10 69.5 13.0 147 43-197 246-397 (473)
238 COG2270 Permeases of the major 98.2 1.4E-05 3.1E-10 68.6 9.6 132 52-198 277-408 (438)
239 PRK09669 putative symporter Ya 98.2 1.9E-05 4.1E-10 70.8 11.0 120 163-282 41-172 (444)
240 KOG0253|consensus 98.1 1.9E-05 4E-10 66.7 8.7 143 166-310 112-255 (528)
241 PRK11462 putative transporter; 98.1 0.0001 2.2E-09 66.4 13.7 121 163-283 41-173 (460)
242 PF01770 Folate_carrier: Reduc 98.1 0.00019 4.2E-09 62.3 14.4 221 49-269 25-389 (412)
243 PF06813 Nodulin-like: Nodulin 98.0 0.0001 2.2E-09 60.0 11.9 119 163-283 33-158 (250)
244 PF05631 DUF791: Protein of un 98.0 0.0003 6.5E-09 59.6 14.4 149 161-310 63-221 (354)
245 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00046 1E-08 64.4 16.1 139 165-303 21-179 (654)
246 KOG0637|consensus 97.9 2.2E-05 4.9E-10 67.9 6.6 81 38-118 42-127 (498)
247 COG2211 MelB Na+/melibiose sym 97.9 0.00091 2E-08 59.2 16.6 142 45-197 253-400 (467)
248 PF06963 FPN1: Ferroportin1 (F 97.9 0.0032 7E-08 55.7 19.8 116 160-275 286-411 (432)
249 KOG4332|consensus 97.9 6.3E-05 1.4E-09 60.8 7.8 228 46-283 55-309 (454)
250 COG0477 ProP Permeases of the 97.9 0.00027 5.9E-09 59.1 12.3 91 41-131 15-109 (338)
251 PF05978 UNC-93: Ion channel r 97.8 0.00069 1.5E-08 50.9 11.8 109 171-280 41-149 (156)
252 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.0012 2.7E-08 61.6 13.5 153 52-216 12-180 (654)
253 PF02487 CLN3: CLN3 protein; 97.6 0.0045 9.7E-08 53.9 15.5 104 171-276 285-391 (402)
254 KOG3098|consensus 97.4 0.018 3.9E-07 51.2 17.0 66 65-131 51-117 (461)
255 KOG4686|consensus 97.4 0.002 4.3E-08 52.9 9.4 122 53-195 290-416 (459)
256 PF03209 PUCC: PUCC protein; 97.3 0.0092 2E-07 51.7 13.4 130 50-194 231-364 (403)
257 PF03092 BT1: BT1 family; Int 97.3 0.0028 6.1E-08 56.6 10.8 139 165-305 23-174 (433)
258 COG0477 ProP Permeases of the 97.3 0.003 6.4E-08 52.8 10.2 115 168-282 40-158 (338)
259 KOG3762|consensus 97.2 0.00057 1.2E-08 60.7 5.3 162 39-217 382-546 (618)
260 KOG2325|consensus 97.0 0.0082 1.8E-07 53.5 10.8 145 162-307 66-231 (488)
261 PF01770 Folate_carrier: Reduc 96.9 0.056 1.2E-06 47.3 14.7 127 182-309 56-185 (412)
262 TIGR00769 AAA ADP/ATP carrier 96.8 0.09 2E-06 47.3 15.1 98 184-281 61-190 (472)
263 KOG2563|consensus 96.8 0.023 4.9E-07 49.8 10.9 117 166-283 78-203 (480)
264 PF05978 UNC-93: Ion channel r 96.6 0.072 1.6E-06 40.1 11.4 73 60-133 34-106 (156)
265 PF12832 MFS_1_like: MFS_1 lik 96.2 0.018 4E-07 37.6 5.5 45 162-206 30-74 (77)
266 PF00854 PTR2: POT family; In 96.1 0.042 9.1E-07 48.1 9.3 107 198-304 2-121 (372)
267 KOG3574|consensus 96.1 0.04 8.7E-07 47.3 8.6 53 230-282 379-431 (510)
268 KOG3098|consensus 95.8 0.18 4E-06 44.9 11.5 107 171-278 54-160 (461)
269 TIGR00769 AAA ADP/ATP carrier 95.6 1.6 3.6E-05 39.4 26.0 63 51-113 26-94 (472)
270 PF06779 DUF1228: Protein of u 95.5 0.11 2.3E-06 34.5 6.9 61 162-222 22-82 (85)
271 PRK03612 spermidine synthase; 95.1 0.59 1.3E-05 42.9 12.8 132 167-300 50-191 (521)
272 KOG3097|consensus 94.2 3.1 6.7E-05 35.4 16.0 60 73-133 68-127 (390)
273 PF03137 OATP: Organic Anion T 94.0 0.01 2.3E-07 54.3 -1.0 118 164-281 35-202 (539)
274 KOG1479|consensus 93.9 3.5 7.6E-05 36.2 14.0 107 171-280 286-402 (406)
275 KOG3626|consensus 93.9 0.16 3.4E-06 47.8 6.2 143 169-311 134-348 (735)
276 KOG1237|consensus 93.7 2.5 5.4E-05 39.3 13.7 162 47-217 57-244 (571)
277 PF03219 TLC: TLC ATP/ADP tran 91.4 4.4 9.6E-05 36.9 11.8 103 179-281 71-205 (491)
278 PF00854 PTR2: POT family; In 90.0 0.53 1.2E-05 41.2 4.8 112 94-217 2-122 (372)
279 KOG3810|consensus 89.7 0.21 4.6E-06 42.5 1.9 130 173-305 277-420 (433)
280 PRK03612 spermidine synthase; 89.3 18 0.00039 33.4 16.0 132 56-203 43-182 (521)
281 PF06963 FPN1: Ferroportin1 (F 87.0 2.2 4.7E-05 38.1 6.6 83 28-110 258-340 (432)
282 TIGR00939 2a57 Equilibrative N 86.8 3.1 6.6E-05 37.4 7.4 108 168-276 308-428 (437)
283 PF02487 CLN3: CLN3 protein; 84.9 14 0.0003 32.7 10.4 119 171-295 63-184 (402)
284 KOG1237|consensus 83.0 22 0.00049 33.2 11.4 133 168-300 74-239 (571)
285 PF03219 TLC: TLC ATP/ADP tran 75.7 66 0.0014 29.5 25.4 89 23-112 19-108 (491)
286 COG3202 ATP/ADP translocase [E 75.0 67 0.0014 29.3 14.4 104 179-282 74-210 (509)
287 KOG4332|consensus 74.6 6.6 0.00014 32.7 4.6 121 163-284 68-195 (454)
288 PF01733 Nucleoside_tran: Nucl 73.4 1 2.2E-05 38.3 -0.2 104 172-276 187-304 (309)
289 PF07672 MFS_Mycoplasma: Mycop 72.9 42 0.00091 27.7 8.8 107 171-277 145-263 (267)
290 COG3202 ATP/ADP translocase [E 72.8 76 0.0017 29.0 24.1 88 22-113 21-112 (509)
291 KOG3810|consensus 71.3 14 0.0003 32.1 5.9 123 186-309 61-186 (433)
292 KOG0637|consensus 69.4 29 0.00062 31.3 7.6 66 67-132 336-401 (498)
293 COG5336 Uncharacterized protei 68.6 15 0.00032 25.5 4.5 34 251-284 37-70 (116)
294 KOG3574|consensus 59.3 26 0.00055 31.0 5.4 93 184-276 80-189 (510)
295 TIGR00939 2a57 Equilibrative N 57.6 1.5E+02 0.0032 26.8 11.9 28 225-253 111-138 (437)
296 COG1268 BioY Uncharacterized c 54.4 38 0.00081 26.3 5.2 24 69-92 88-111 (184)
297 COG2119 Predicted membrane pro 54.3 1E+02 0.0022 24.0 9.2 37 175-211 142-178 (190)
298 PF02694 UPF0060: Uncharacteri 52.6 24 0.00053 24.4 3.4 51 63-113 54-104 (107)
299 COG5336 Uncharacterized protei 49.9 44 0.00095 23.3 4.3 38 66-103 45-83 (116)
300 PF02632 BioY: BioY family; I 49.9 55 0.0012 24.4 5.3 42 69-110 59-100 (148)
301 PF06912 DUF1275: Protein of u 49.5 1.3E+02 0.0028 23.8 12.7 30 266-295 172-201 (209)
302 PF13000 Acatn: Acetyl-coenzym 47.3 1.6E+02 0.0035 27.1 8.6 53 230-282 415-467 (544)
303 PRK02237 hypothetical protein; 45.9 42 0.0009 23.4 3.7 50 64-113 57-106 (109)
304 PF07672 MFS_Mycoplasma: Mycop 45.2 1.2E+02 0.0025 25.2 6.9 65 66-130 144-218 (267)
305 COG3619 Predicted membrane pro 42.4 1.8E+02 0.004 23.5 15.5 48 260-307 172-219 (226)
306 KOG3880|consensus 41.8 53 0.0011 28.2 4.5 64 213-276 335-398 (409)
307 PF11947 DUF3464: Protein of u 40.8 1.4E+02 0.003 22.5 6.1 41 230-270 104-144 (153)
308 KOG4830|consensus 40.8 10 0.00022 31.4 0.2 99 33-131 22-143 (412)
309 PF13000 Acatn: Acetyl-coenzym 38.6 3.3E+02 0.0071 25.3 9.8 38 242-279 140-177 (544)
310 COG4769 Predicted membrane pro 38.3 31 0.00066 26.1 2.4 50 72-127 82-131 (181)
311 TIGR02230 ATPase_gene1 F0F1-AT 34.5 1.6E+02 0.0034 20.4 5.9 33 177-209 53-85 (100)
312 KOG3880|consensus 32.3 1.1E+02 0.0024 26.4 4.9 132 65-216 64-197 (409)
313 PRK13743 conjugal transfer pro 31.6 2E+02 0.0043 20.8 5.4 52 35-86 50-101 (141)
314 PF10785 NADH-u_ox-rdase: NADH 31.3 1.5E+02 0.0033 19.7 4.6 41 76-116 31-78 (86)
315 KOG4112|consensus 31.2 1.7E+02 0.0036 19.8 4.6 38 259-297 26-63 (101)
316 PF02694 UPF0060: Uncharacteri 29.4 93 0.002 21.7 3.4 51 167-217 54-104 (107)
317 KOG2601|consensus 29.1 1.5E+02 0.0032 26.4 5.3 81 31-111 30-111 (503)
318 KOG2881|consensus 27.5 1.1E+02 0.0024 25.3 4.0 27 83-109 89-115 (294)
319 PRK10599 calcium/sodium:proton 26.2 2.8E+02 0.006 24.4 6.5 60 44-106 238-300 (366)
320 PF04281 Tom22: Mitochondrial 25.8 2.8E+02 0.006 20.5 6.1 23 245-267 60-82 (137)
321 PRK02237 hypothetical protein; 25.0 1.8E+02 0.0038 20.4 4.1 49 169-217 58-106 (109)
322 PRK10263 DNA translocase FtsK; 25.0 8.3E+02 0.018 25.9 10.2 18 267-284 142-159 (1355)
323 PF06912 DUF1275: Protein of u 23.6 3.7E+02 0.008 21.1 15.5 29 172-200 167-195 (209)
324 KOG3097|consensus 23.5 4.3E+02 0.0093 23.1 6.9 69 180-249 71-139 (390)
325 KOG1479|consensus 22.1 5.8E+02 0.013 22.9 13.3 31 224-255 121-151 (406)
326 TIGR02230 ATPase_gene1 F0F1-AT 21.9 2.5E+02 0.0053 19.4 4.4 26 79-104 58-84 (100)
327 PF01810 LysE: LysE type trans 21.8 3.7E+02 0.0081 20.6 8.2 67 27-94 98-168 (191)
328 TIGR02185 Trep_Strep conserved 21.5 4E+02 0.0087 20.8 8.5 39 72-110 39-77 (189)
329 PF05232 BTP: Bacterial Transm 20.3 90 0.0019 19.6 1.9 47 47-93 18-64 (67)
330 PF04226 Transgly_assoc: Trans 20.2 1.9E+02 0.0042 16.7 4.5 18 179-196 3-20 (48)
331 PF11298 DUF3099: Protein of u 20.0 2.6E+02 0.0056 18.0 4.7 34 86-119 10-43 (73)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=4.7e-30 Score=236.60 Aligned_cols=301 Identities=28% Similarity=0.441 Sum_probs=238.0
Q ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccch
Q psy10938 13 FENALAAAGYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGR 92 (314)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Gr 92 (314)
.++..++.+.++++|.++++++++.+..+++...+++++|.+.+++|++..+.+++.+++.++.+++++++|+++||+||
T Consensus 152 ~d~~l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GR 231 (742)
T TIGR01299 152 YELIIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGR 231 (742)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34455667788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C--------------------------
Q psy10938 93 KITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASR--------------P-------------------------- 132 (314)
Q Consensus 93 r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P-------------------------- 132 (314)
|+++++++++.+++.++++++++++.++++|++.|++.+ |
T Consensus 232 R~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 232 KQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 1
Q ss_pred ------------------------------------------CC--------CCCcc----------------c--chh-
Q psy10938 133 ------------------------------------------LI--------PGHPG----------------K--VAS- 143 (314)
Q Consensus 133 ------------------------------------------l~--------~~~~~----------------~--~~~- 143 (314)
++ +.+.+ . ...
T Consensus 312 ~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~ 391 (742)
T TIGR01299 312 WAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKV 391 (742)
T ss_pred HHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHH
Confidence 00 00000 0 000
Q ss_pred --hhh--h---h----c-CCcCCC-------------------c----Ccc-----------------------------
Q psy10938 144 --VCD--V---S----A-LQPADN-------------------S----TVA----------------------------- 159 (314)
Q Consensus 144 --~~~--~---~----~-~~~~~~-------------------~----~~~----------------------------- 159 (314)
..+ . . + ...... . .+.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~ 471 (742)
T TIGR01299 392 FSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDM 471 (742)
T ss_pred HHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0 0 000000 0 000
Q ss_pred -ccc------------------------------------------CC---------C----------------------
Q psy10938 160 -TCS------------------------------------------GE---------V---------------------- 165 (314)
Q Consensus 160 -~~~------------------------------------------~~---------~---------------------- 165 (314)
... +. +
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 551 (742)
T TIGR01299 472 IKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTF 551 (742)
T ss_pred HHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccch
Confidence 000 00 0
Q ss_pred ------------------------------------------ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHH
Q psy10938 166 ------------------------------------------NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAG 203 (314)
Q Consensus 166 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 203 (314)
.........+..++.+++.+++++++||+|||+++..+
T Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~ 631 (742)
T TIGR01299 552 IDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGS 631 (742)
T ss_pred hhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 00123345566788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 204 LVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.++.+++.+++.+.++....++..++.+++.++.++....+++|++|++.|++++|+.+...++|++++|++.|.+.+..
T Consensus 632 ~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~ 711 (742)
T TIGR01299 632 MVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT 711 (742)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999998888887776666666667777777888889999999999999999999999999999999999999988876
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q psy10938 284 CLILICTLAAMLLIAGVFSMFLPATGKKEL 313 (314)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 313 (314)
...++++.+++.++++++.+++|||+++.+
T Consensus 712 ~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 712 KAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 567888888888888888888899998875
No 2
>KOG0253|consensus
Probab=99.97 E-value=3.4e-29 Score=204.93 Aligned_cols=303 Identities=22% Similarity=0.371 Sum_probs=247.8
Q ss_pred cccHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc
Q psy10938 10 DATFENALAAAGYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr 89 (314)
+...+++++..+++++||........+++.+.+.....+.+.|...+.+|.+..|..++....+.+..+++..+|.++|+
T Consensus 60 ~~tv~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~ 139 (528)
T KOG0253|consen 60 SFTVDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT 139 (528)
T ss_pred eeeehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh
Confidence 33456677788899999999999999999888888888889999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCC-------------------------------------
Q psy10938 90 QGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRP------------------------------------- 132 (314)
Q Consensus 90 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~P------------------------------------- 132 (314)
+|||+.+.......++...+.+.++|+..+.+.|.+.|+|.||
T Consensus 140 ~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~l 219 (528)
T KOG0253|consen 140 IGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALL 219 (528)
T ss_pred hhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999991
Q ss_pred ---------------------------------------CC-------------------------------CCCcccch
Q psy10938 133 ---------------------------------------LI-------------------------------PGHPGKVA 142 (314)
Q Consensus 133 ---------------------------------------l~-------------------------------~~~~~~~~ 142 (314)
++ .+.+++..
T Consensus 220 aw~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~ 299 (528)
T KOG0253|consen 220 AWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEES 299 (528)
T ss_pred HHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhh
Confidence 00 00000000
Q ss_pred hhhhhhcC-CcCCCc------Ccc-----------------------------------------------cc---cCCC
Q psy10938 143 SVCDVSAL-QPADNS------TVA-----------------------------------------------TC---SGEV 165 (314)
Q Consensus 143 ~~~~~~~~-~~~~~~------~~~-----------------------------------------------~~---~~~~ 165 (314)
...+.... .++... .+. ++ -.++
T Consensus 300 ~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s 379 (528)
T KOG0253|consen 300 DLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLS 379 (528)
T ss_pred chhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCcc
Confidence 00000000 000000 000 00 1234
Q ss_pred ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeee
Q psy10938 166 NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIM 245 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
...-+.-.....+..++|.++.++++||+|||+.+..+.++.+++.+++....+........+..-++..+.+.+.+.|.
T Consensus 380 ~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYt 459 (528)
T KOG0253|consen 380 VAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYT 459 (528)
T ss_pred chhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEec
Confidence 44555667788899999999999999999999999999999999999998888777777888888899999999999999
Q ss_pred cccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcc-cCCCCCC
Q psy10938 246 VDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLP-ATGKKEL 313 (314)
Q Consensus 246 ~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 313 (314)
+|++|+..|+++.|.+...+++|+++.|++. ...+..-+.+..+.+.++++++++..++| |||+|.+
T Consensus 460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred CcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 9999999999999999999999999999998 55555557888899999999999888875 8998875
No 3
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=1.1e-27 Score=211.41 Aligned_cols=283 Identities=19% Similarity=0.227 Sum_probs=218.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLV 102 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 102 (314)
.+++|.++.+.+...+.++++....++..|.+.+|+|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 45788888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C------------------------------------
Q psy10938 103 DGLCGIASSVAQYYGVFLALRFINGFASR--------------P------------------------------------ 132 (314)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------ 132 (314)
..++.+++.+++|++.+++.|++.|++.+ |
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 169 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWR 169 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 99999999999999999999999999887 1
Q ss_pred --------------------CCCCCcccch-----hh----hhhhcCCcCCCcCcc----------------------cc
Q psy10938 133 --------------------LIPGHPGKVA-----SV----CDVSALQPADNSTVA----------------------TC 161 (314)
Q Consensus 133 --------------------l~~~~~~~~~-----~~----~~~~~~~~~~~~~~~----------------------~~ 161 (314)
+++..++.++ +. .+..+..+.+..... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (406)
T PRK11551 170 HIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG 249 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111110000 00 000110000000000 23
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhh
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.+.+..+.+.......++.+++.++.|++.||+|+|+.+..+.+...++.+.+...++.+......++.+++.....+..
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHH
Confidence 45666777888888889999999999999999999998887777666666666666666555555666676677777888
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHH--HHHHHHHHHHHHHHHHHhc
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLI--LICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~ 305 (314)
+++..|.+|+++|+++.|+.+...++|..++|.+.|.+.|+.+.. .++....+.+++.++.+.+
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999986532 3334444444444444444
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.1e-26 Score=196.77 Aligned_cols=282 Identities=21% Similarity=0.225 Sum_probs=218.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
+..+..++.+.++.|..+.....+..++|++.+|+|+|..+.|++.|.|.+++++++++...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 34466777788888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C-------------------------------------
Q psy10938 104 GLCGIASSVAQYYGVFLALRFINGFASR--------------P------------------------------------- 132 (314)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------- 132 (314)
.++.+++++++||+.++++|++.|+..| |
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 9999999999999999999999999999 1
Q ss_pred -------------------CC-CCCcccc-hhhhhhhcCCcCCCcCcc-----------------------cccCCCChh
Q psy10938 133 -------------------LI-PGHPGKV-ASVCDVSALQPADNSTVA-----------------------TCSGEVNPE 168 (314)
Q Consensus 133 -------------------l~-~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~ 168 (314)
++ ++.+++. .+.++..+..++...... +..+.+...
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~ 248 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA 248 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH
Confidence 24 2222221 222222222111111000 456778889
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHhhhhhchhheeeecc
Q psy10938 169 VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTS-TQNLILSCIFEALTGCCISVVYCIMVD 247 (314)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
..+....++++.++|..++|++.|| +.|+.+.....+..+..+.+.+..+. +......++.++.............++
T Consensus 249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~ 327 (394)
T COG2814 249 VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR 327 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc
Confidence 9999999999999999999999999 88888888877777777777666544 344444444555555555555566666
Q ss_pred cccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccc
Q psy10938 248 LFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 248 ~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
.. ++.+..+.+++....++|..+|..++|.+.|+.+ ....+..+.+.+++.++.....+
T Consensus 328 ~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 328 LA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred cC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 4778999999999999999999999999999988 44556666666666665554433
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=4.1e-27 Score=211.08 Aligned_cols=292 Identities=13% Similarity=0.099 Sum_probs=205.0
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchh
Q psy10938 14 ENALAAAGYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRK 93 (314)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr 93 (314)
++..++..+.+..+.++..+++.++..+.++..+++..|.+.+|+|+|..+.|++.+.+.+++.+++++.|+++||+|||
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r 94 (467)
T PRK09556 15 PLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK 94 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc
Confidence 33333444566677888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHh-----hhHHHHHHHHHHHhhcccC---C---------------------------------
Q psy10938 94 ITLIGALLVDGLCGIASSV-----AQYYGVFLALRFINGFASR---P--------------------------------- 132 (314)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~---P--------------------------------- 132 (314)
+++..+.+++++..+..++ ++|++.+++.|+++|++.+ |
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~ 174 (467)
T PRK09556 95 QFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGA 174 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHH
Confidence 9999888888877766655 5899999999999999877 1
Q ss_pred ------------------------------------CCCCCcccch-----h-hh-----hh-hc-CCcCC--C------
Q psy10938 133 ------------------------------------LIPGHPGKVA-----S-VC-----DV-SA-LQPAD--N------ 155 (314)
Q Consensus 133 ------------------------------------l~~~~~~~~~-----~-~~-----~~-~~-~~~~~--~------ 155 (314)
+.+++|++.. + .. +. .+ .++.. +
T Consensus 175 ~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (467)
T PRK09556 175 GGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYV 254 (467)
T ss_pred HHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHH
Confidence 0111111100 0 00 00 00 00000 0
Q ss_pred -cCcc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHH
Q psy10938 156 -STVA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLS 207 (314)
Q Consensus 156 -~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 207 (314)
+++. +..+.+..+++.......++.+++.++.|+++||++||+.......+.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~ 334 (467)
T PRK09556 255 LKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALA 334 (467)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 0000 334666777778888888899999999999999999887765544333
Q ss_pred HHHHHHH--HHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhh-hhhhHHHHHHHHHh---
Q psy10938 208 SGVAMAL--YYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRF-GGLTGNLMFGFLID--- 281 (314)
Q Consensus 208 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~~~p~~~g~l~~--- 281 (314)
.+..... ...++.+......++.+++.............|.+|++.++++.|+.+..+++ |.+++|.+.|.+.|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~ 414 (467)
T PRK09556 335 LIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTK 414 (467)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccc
Confidence 3332222 22223333334444444333333333335666999999999999999999996 77999999999999
Q ss_pred ---------hhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 282 ---------GHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 282 ---------~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
..+ ...|++.+++.+++.+..+++
T Consensus 415 ~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 415 NGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 344 455666666666665554433
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.95 E-value=1.6e-26 Score=202.79 Aligned_cols=279 Identities=19% Similarity=0.085 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGL 105 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 105 (314)
+|..++.+.++.+..........+++|.+.+|+|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+..+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 34444444444444444444556778999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhcccC--------------C---------------------------------------
Q psy10938 106 CGIASSVAQYYGVFLALRFINGFASR--------------P--------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P--------------------------------------- 132 (314)
+.+.+.+++|++++++.|+++|++.+ |
T Consensus 87 ~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 87 SHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 99999999999999999999999877 1
Q ss_pred -----------------CCCCCcccchhhh---hhhcCCcCCCcCcc--------------------cccCCCChhHHHH
Q psy10938 133 -----------------LIPGHPGKVASVC---DVSALQPADNSTVA--------------------TCSGEVNPEVFSH 172 (314)
Q Consensus 133 -----------------l~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 172 (314)
+++.+++++...+ +..+++........ +..+.+....+..
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~ 246 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLLPSEHSGSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLL 246 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 1221111111111 11111110000000 2345666777888
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccch
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTN 252 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 252 (314)
.....++.++++++.+++.||+++|....................++.+......++.+++.....+.......|..| +
T Consensus 247 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~ 325 (390)
T PRK03545 247 LLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-D 325 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-C
Confidence 888889999999999999999998865444333333322333344444555555556666665555666677778766 6
Q ss_pred hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 253 LRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 253 ~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
.|+++.|+.+...++|..+||.+.|.+.|+.+ ...++..+.+.+++.+.....
T Consensus 326 ~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 326 ATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999988 566767777777766655543
No 7
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=1.6e-26 Score=203.03 Aligned_cols=282 Identities=11% Similarity=0.039 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHH
Q psy10938 25 FHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDG 104 (314)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 104 (314)
+|++..+..++.++..+.+....++.+|++.+++|+|+.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45667777788888999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHhhhHHHHHHHHHHHhhcccC--------------C--------------------------------------
Q psy10938 105 LCGIASSVAQYYGVFLALRFINGFASR--------------P-------------------------------------- 132 (314)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P-------------------------------------- 132 (314)
++.++..++++++.+++.|+++|++.+ |
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 999999999999999999999999877 1
Q ss_pred ----------------CCCCCcccchhhhhhhcCCcCCCcCcc---------------------------cccCCCChhH
Q psy10938 133 ----------------LIPGHPGKVASVCDVSALQPADNSTVA---------------------------TCSGEVNPEV 169 (314)
Q Consensus 133 ----------------l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~ 169 (314)
+..+.|+.+++..+..+...+....+. +..+.+..+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 243 (394)
T PRK03699 164 VYACIGLVYVAIFILTLFSEFPALGKHAPKADKPVAKEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDA 243 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCccccCccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHh
Confidence 011111100000000000000000110 3346667777
Q ss_pred HHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccc
Q psy10938 170 FSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLF 249 (314)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
+.......++..+++++.+++.||+++|+.+.....+..+...++...++.+......++.+++.+..++...+...|..
T Consensus 244 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 323 (394)
T PRK03699 244 GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT 323 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888899999999999999999999888777776666666555555555555566677777777777777777776
Q ss_pred cchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccc
Q psy10938 250 PTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 250 p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
|. .+++..+......++|..++|.+.|++.|..+ ...++..+++.+++.+.+...++
T Consensus 324 ~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 324 KV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred cC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 64 45778899999999999999999999999877 55666667776666665555543
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.95 E-value=1.5e-26 Score=202.95 Aligned_cols=282 Identities=13% Similarity=0.077 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHH
Q psy10938 27 YILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLC 106 (314)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 106 (314)
|.....++.+.+..... ...++++|.+++|+|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~ 87 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG 87 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH
Confidence 44444444444433332 56788999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHHhhcccC--------------C----------------------------------------
Q psy10938 107 GIASSVAQYYGVFLALRFINGFASR--------------P---------------------------------------- 132 (314)
Q Consensus 107 ~~~~~~~~~~~~l~~~r~l~G~~~~--------------P---------------------------------------- 132 (314)
.+.+++++|++.++++|+++|++.+ |
T Consensus 88 ~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~ 167 (393)
T PRK09705 88 ALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLA 167 (393)
T ss_pred HHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 9999999999999999999999999 1
Q ss_pred ---------------CCCCCcccchhhhhhhcCCcCCCcCcc-------------------------cccCCCChhHHHH
Q psy10938 133 ---------------LIPGHPGKVASVCDVSALQPADNSTVA-------------------------TCSGEVNPEVFSH 172 (314)
Q Consensus 133 ---------------l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~ 172 (314)
..+++++++++.+. +..+..+.... .+.+.+..+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~ 245 (393)
T PRK09705 168 WWALPAVVALFAWWWQSAREVASSHKTTT--TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSL 245 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCCCc--CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHH
Confidence 01111111100000 00000000000 3356677778888
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc-c
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP-T 251 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 251 (314)
.....++.++++++.+++.||++||+....+..+..++..++...+..... ...++.+++.+...+.......+..+ +
T Consensus 246 ~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 324 (393)
T PRK09705 246 LALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCLLLALDHSVQP 324 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHHHHHHhhcCCH
Confidence 899999999999999999999999998888877777666655433332222 22334555666666766656666664 6
Q ss_pred hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHH-hcccCCCCC
Q psy10938 252 NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSM-FLPATGKKE 312 (314)
Q Consensus 252 ~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 312 (314)
+++++..|+.+...++++.++|.+.|++.|..| ...+.+.+.+.++..++.. +.||+++|.
T Consensus 325 ~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 325 AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 789999999999999999999999999999976 4455555555555555433 448877654
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.1e-26 Score=194.59 Aligned_cols=282 Identities=16% Similarity=0.198 Sum_probs=225.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHH
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALL 101 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 101 (314)
.+++|+.++...++++...++.+.+++.+.|.+.+|.++|.+|.|++.|.+.++|.++..+.|.++||.++|+.+..+++
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHhhhHHHHHHHHHHHhhcccC---C----------------------------------------------
Q psy10938 102 VDGLCGIASSVAQYYGVFLALRFINGFASR---P---------------------------------------------- 132 (314)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~---P---------------------------------------------- 132 (314)
+.++..++++++++.+.+.+.-++.|..+| |
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 999999999999999999999999999888 2
Q ss_pred ----------------------CCCCCcccc--hhh-------hhhhcCCcCCC-cCcc---------------------
Q psy10938 133 ----------------------LIPGHPGKV--ASV-------CDVSALQPADN-STVA--------------------- 159 (314)
Q Consensus 133 ----------------------l~~~~~~~~--~~~-------~~~~~~~~~~~-~~~~--------------------- 159 (314)
+-+++|++. ++. .+..++.++.+ .+..
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~v 262 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANV 262 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHH
Confidence 112222211 011 11101111111 0000
Q ss_pred ------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh--hhHHHH-HHHHHHHHHHHHHHHHhc
Q psy10938 160 ------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM--GAKWFL-VAGLVLSSGVAMALYYVQ 218 (314)
Q Consensus 160 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~-~~~~~~~~~~~~~~~~~~ 218 (314)
+.++.+..++....+.+-.++++|++++|+++||+ |||... .++.+...++.+.+...+
T Consensus 263 fvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~ 342 (448)
T COG2271 263 FVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAP 342 (448)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCC
Confidence 67788999999999999999999999999999997 566554 445555566666666666
Q ss_pred ch--hHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhh-hhhhHHHHHHHHHhhhh-HHHHHHHHHH
Q psy10938 219 TS--TQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRF-GGLTGNLMFGFLIDGHC-LILICTLAAM 294 (314)
Q Consensus 219 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~~~p~~~g~l~~~~~-~~~~~~~~~~ 294 (314)
+. +...++.++.|++..+..-..-....|..|.+..|++.|+...++++ |.+.+....|++.|.+| ...|.++.+.
T Consensus 343 ~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~ 422 (448)
T COG2271 343 NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIA 422 (448)
T ss_pred CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHH
Confidence 44 56666777788888777777778899999999999999999999998 99999999999999977 4556666555
Q ss_pred HHHHHHHHH
Q psy10938 295 LLIAGVFSM 303 (314)
Q Consensus 295 ~~~~~~~~~ 303 (314)
++++.++.+
T Consensus 423 a~l~~lll~ 431 (448)
T COG2271 423 ALLAILLLL 431 (448)
T ss_pred HHHHHHHHH
Confidence 555555443
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=4.3e-26 Score=200.71 Aligned_cols=284 Identities=15% Similarity=0.113 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc-cccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHH
Q psy10938 28 ILVIFGGLLYAYAAISITVLSFVLPS-AQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLC 106 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 106 (314)
+.+..+.+..++...+..+..+.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34455666777778888888888886 57889999999999999999999999999999999999999999999988887
Q ss_pred hHHHHhh--------hHHHHHHHHHHHhhcccC---C-------------------------------------------
Q psy10938 107 GIASSVA--------QYYGVFLALRFINGFASR---P------------------------------------------- 132 (314)
Q Consensus 107 ~~~~~~~--------~~~~~l~~~r~l~G~~~~---P------------------------------------------- 132 (314)
.+.+.++ .+++++++.|+++|++.+ |
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 6665543 257789999999999988 1
Q ss_pred --------------------CC--CC-Ccccc--hhhhhhhcCCcCCCcCc---c--------------cccCCCChhHH
Q psy10938 133 --------------------LI--PG-HPGKV--ASVCDVSALQPADNSTV---A--------------TCSGEVNPEVF 170 (314)
Q Consensus 133 --------------------l~--~~-~~~~~--~~~~~~~~~~~~~~~~~---~--------------~~~~~~~~~~~ 170 (314)
.. ++ +++++ .+..+..+......... . ...+. .+.+
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 252 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLARPRPAVPPVKGERLPFRRVLGRVWPYGMGLALASIGFGTIATFITLYYAARGW--DGAA 252 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--ccch
Confidence 01 11 00000 00111111000000000 0 11122 2334
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
.......++.+++.+..+++.||+++|+.+..+..+..++.+.....++.+......++.+++.+..++.......|..|
T Consensus 253 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~ 332 (399)
T PRK05122 253 LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVP 332 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC
Confidence 45566778888899999999999999998888888877777777666666666666667777777777777777788899
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLPATGKKEL 313 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 313 (314)
+++|+++.|+.+...++|..++|.+.|.+.|..+ ...++..+.+.+++.+...+++++++|+.
T Consensus 333 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 333 PQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 9999999999999999999999999999999877 55666677777777666666666666554
No 11
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=1.3e-26 Score=210.15 Aligned_cols=265 Identities=22% Similarity=0.390 Sum_probs=202.5
Q ss_pred hhccccccccccc---cchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHH
Q psy10938 49 FVLPSAQCDFGMT---SSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFI 125 (314)
Q Consensus 49 ~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 125 (314)
+..|.+.+|||++ +.+.++..+++.++..+++++.|+++||+|||+++..+.++..++.++.++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678899999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccC--------------C----------------------------------------------------CCCC---
Q psy10938 126 NGFASR--------------P----------------------------------------------------LIPG--- 136 (314)
Q Consensus 126 ~G~~~~--------------P----------------------------------------------------l~~~--- 136 (314)
.|++.+ | +++.
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~ 269 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRW 269 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 999998 1 1111
Q ss_pred -----Ccccc-hhhhh---------------h--hcC--CcCC-Cc------Ccc-----------------------cc
Q psy10938 137 -----HPGKV-ASVCD---------------V--SAL--QPAD-NS------TVA-----------------------TC 161 (314)
Q Consensus 137 -----~~~~~-~~~~~---------------~--~~~--~~~~-~~------~~~-----------------------~~ 161 (314)
+.++. +...+ . .+. .+.+ .. .+. ..
T Consensus 270 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (505)
T TIGR00898 270 LISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLD 349 (505)
T ss_pred HHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00000 00000 0 000 0000 00 000 00
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHHHHhhhhhch
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTS--TQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 239 (314)
......+........++..+++.++.+++.||+|||+.+..+.++.+++++++.+.++. +......++.+++....++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (505)
T TIGR00898 350 LGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQ 429 (505)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 11112234455566677888899999999999999999999998888888877776654 3444455556666777788
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLPATGKKELD 314 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 314 (314)
..+.+.+|.+|++.|+++.|+.+....+|++++|++.+ +.+.....++.+++++.+++.+..+++||+++++++
T Consensus 430 ~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~ 503 (505)
T TIGR00898 430 MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLP 503 (505)
T ss_pred HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCC
Confidence 88899999999999999999999999999999999998 555444777888888888888888888999998764
No 12
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=4.8e-27 Score=204.72 Aligned_cols=265 Identities=12% Similarity=0.066 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
+............+++..|.+.+|+|+|+.+.|++.+++.+++.+++++.|+++||+|||+++..+..+.+++.+.++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 9 TVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH
Confidence 33333344446677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcccC--------------C-----------------------------------------------
Q psy10938 114 QYYGVFLALRFINGFASR--------------P----------------------------------------------- 132 (314)
Q Consensus 114 ~~~~~l~~~r~l~G~~~~--------------P----------------------------------------------- 132 (314)
+|++.+++.|++.|++.+ |
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 168 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLL 168 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 999999999999999887 1
Q ss_pred --------CCCCCcccch---h-------hhhhhcCCcCCCcCcc-------------------cccCCCChhHHHHHHH
Q psy10938 133 --------LIPGHPGKVA---S-------VCDVSALQPADNSTVA-------------------TCSGEVNPEVFSHTLI 175 (314)
Q Consensus 133 --------l~~~~~~~~~---~-------~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 175 (314)
++++++++.+ + ..+..+++........ +..+.+..+.+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T TIGR00890 169 VIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSI 248 (377)
T ss_pred HHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 1111111000 0 0000000000000000 2234455566777888
Q ss_pred HHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhH--HHHHHHHHHHhhhhhchhheeeecccccchh
Q psy10938 176 IGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQ--NLILSCIFEALTGCCISVVYCIMVDLFPTNL 253 (314)
Q Consensus 176 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 253 (314)
..+...+++++.+++.||++||+.+..+..+..++.+...+.++... ......+.+++.+...+....+..|.+|+++
T Consensus 249 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~ 328 (377)
T TIGR00890 249 SSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN 328 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh
Confidence 88999999999999999999999988888888887777666553322 2233444555666666667778999999999
Q ss_pred hHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHH
Q psy10938 254 RVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIA 298 (314)
Q Consensus 254 r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~ 298 (314)
|+++.|+.+....+|..++|.+.|.+.|..+ ...+.+.+++.+++
T Consensus 329 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 329 SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999999999999999877 44555555554443
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=199.41 Aligned_cols=263 Identities=18% Similarity=0.229 Sum_probs=196.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLV 102 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 102 (314)
++++++.+..+.+.++.++++.....+..|.+++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++..+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45677778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C------------------------------------
Q psy10938 103 DGLCGIASSVAQYYGVFLALRFINGFASR--------------P------------------------------------ 132 (314)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------ 132 (314)
.+++.++++++++++.++++|+++|++.+ |
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 99999999999999999999999999877 1
Q ss_pred ---------------CCCCCcccch----hh------------------hhhhcCCcCCCcCcc----------------
Q psy10938 133 ---------------LIPGHPGKVA----SV------------------CDVSALQPADNSTVA---------------- 159 (314)
Q Consensus 133 ---------------l~~~~~~~~~----~~------------------~~~~~~~~~~~~~~~---------------- 159 (314)
+....++..+ +. .+.++.+........
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFG 252 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0110111100 00 000000000000000
Q ss_pred ------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH-
Q psy10938 160 ------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEA- 232 (314)
Q Consensus 160 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (314)
...+.+....+.......++.+++.++.+++.||++||+.+..+.++..+..+.....++........++.+.
T Consensus 253 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (426)
T PRK12307 253 LLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLM 332 (426)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 2234455556666777888899999999999999999999888877776665554433322222222222222
Q ss_pred -hhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH
Q psy10938 233 -LTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL 285 (314)
Q Consensus 233 -~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~ 285 (314)
...+..+..+.++.|.+|++.|+++.|+.+...++++.++|.+.|.+.|..+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~ 386 (426)
T PRK12307 333 ATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGL 386 (426)
T ss_pred HhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccH
Confidence 22233445567789999999999999999999999999999999999998873
No 14
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=1.2e-25 Score=198.10 Aligned_cols=264 Identities=16% Similarity=0.197 Sum_probs=203.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHH
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALL 101 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 101 (314)
.++++|+.+..+++.++.++++....+++.|.+++++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C-----------------------------------
Q psy10938 102 VDGLCGIASSVAQYYGVFLALRFINGFASR--------------P----------------------------------- 132 (314)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P----------------------------------- 132 (314)
+..++.+++.++++++.+++.|++.|++.+ |
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999987 1
Q ss_pred ----------------------CCCCCc-c-cch---h----hhhhhcCCcC-CC--------------cCc--c-----
Q psy10938 133 ----------------------LIPGHP-G-KVA---S----VCDVSALQPA-DN--------------STV--A----- 159 (314)
Q Consensus 133 ----------------------l~~~~~-~-~~~---~----~~~~~~~~~~-~~--------------~~~--~----- 159 (314)
++++++ + +++ . .++..+.++. +. ... .
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVV 245 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHH
Confidence 111110 0 000 0 0000100000 00 000 0
Q ss_pred ---------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-Hh
Q psy10938 160 ---------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY-YV 217 (314)
Q Consensus 160 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~~ 217 (314)
...+.+..+.+.......++.+++.++.+++.||+|||+.+..+.....+...... ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (405)
T TIGR00891 246 LVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG 325 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC
Confidence 12355666777778888899999999999999999999988877766544333322 22
Q ss_pred cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH
Q psy10938 218 QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL 285 (314)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~ 285 (314)
++.+......++.+++.....+..+.+..|.+|++.|+++.|+.+...++|..++|++.|.+.|+.|.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 326 ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE 393 (405)
T ss_pred CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33333333334455556666777788899999999999999999999999999999999999999873
No 15
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=3.7e-25 Score=193.51 Aligned_cols=273 Identities=14% Similarity=0.094 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
+..+.++.++...+.....+.+|.+.+++|.|+.++|++.+.+.+++.+++++.|+++||+|||+++..+..+..++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555677778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhhcccC---C------------------------------------------------------
Q psy10938 110 SSVAQYYGVFLALRFINGFASR---P------------------------------------------------------ 132 (314)
Q Consensus 110 ~~~~~~~~~l~~~r~l~G~~~~---P------------------------------------------------------ 132 (314)
+++++|++.++++|+++|++.+ |
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 167 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGL 167 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHH
Confidence 9999999999999999999887 1
Q ss_pred ------------CCCCCcccc--hhhhhhhcCCcCCCcCc-c------------------cccCCCChhHHHHHHHHHhh
Q psy10938 133 ------------LIPGHPGKV--ASVCDVSALQPADNSTV-A------------------TCSGEVNPEVFSHTLIIGLA 179 (314)
Q Consensus 133 ------------l~~~~~~~~--~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~~ 179 (314)
.++++++++ .+..+..+++....... . ++.+.+....+.......+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~ 247 (381)
T PRK03633 168 VLAAILPLLFTRILNQQAENHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSA 247 (381)
T ss_pred HHHHHHHHHHhcccCCCCCCCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 011100000 01111111111000000 0 23455566677777888889
Q ss_pred hhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHH
Q psy10938 180 CIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAA 259 (314)
Q Consensus 180 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g 259 (314)
.+++++..+++.||+++|+.+..+.....++.+... +. ........+.+.+.....|...+...|..|+++++...+
T Consensus 248 ~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 324 (381)
T PRK03633 248 GILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQ 324 (381)
T ss_pred HHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHH
Confidence 999999999999999999988877777666555443 21 222233344555555667888888889998888888888
Q ss_pred HHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 260 LSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 260 ~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
..+...++|..++|.+.|.+.|+.+ ...+.+.+.+.++..+..+..
T Consensus 325 ~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 325 ALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 8888889999999999999999887 556666666666555444443
No 16
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=1.2e-24 Score=196.09 Aligned_cols=286 Identities=16% Similarity=0.178 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccch-hhH-----HhHhhHHHHHHhhhhhhhcccccchhHHHHHHH
Q psy10938 27 YILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSD-KGW-----LNAAPMLGMVFGSYFWGCLADTQGRKITLIGAL 100 (314)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~-----~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 100 (314)
++.+...+++.+++++|...++...|.+.++++.+.++ .++ ..++.++++.++++++|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45667778899999999999999999999999754432 222 257888999999999999999999999999999
Q ss_pred HHHHHHhHHHHhhhHHHH--------HHHHHHHhhcccC--------------C--------------------------
Q psy10938 101 LVDGLCGIASSVAQYYGV--------FLALRFINGFASR--------------P-------------------------- 132 (314)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~--------------P-------------------------- 132 (314)
++++++++++++++|+++ ++++|+++|++.| |
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 8899999999988 1
Q ss_pred ---------------------------------C---CCCCcccchhhhhhh---c----CCcCCC------cCcc----
Q psy10938 133 ---------------------------------L---IPGHPGKVASVCDVS---A----LQPADN------STVA---- 159 (314)
Q Consensus 133 ---------------------------------l---~~~~~~~~~~~~~~~---~----~~~~~~------~~~~---- 159 (314)
+ .++.++......+.. + +.++.. ....
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLT 254 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHH
Confidence 0 011111000000000 0 000000 0000
Q ss_pred ------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHH-HHH
Q psy10938 160 ------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVA-MAL 214 (314)
Q Consensus 160 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~-~~~ 214 (314)
...+.+............++..++.++.|+++||+|||+.+..+.....+.. .++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 255 CIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 1234444555556666778888899999999999999998877665433322 222
Q ss_pred HH--hcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHH
Q psy10938 215 YY--VQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICT 290 (314)
Q Consensus 215 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~ 290 (314)
.. .++........++.+++.+...+....+.+|.+|++.|+++.|+.+....+++.++|++.|++.+..+ ..+++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~ 414 (490)
T PRK10642 335 ILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYY 414 (490)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 22 22223333334444555555556667778899999999999998777778888999999999988654 444555
Q ss_pred HHHHHHHHHHHHHhcccCCCCC
Q psy10938 291 LAAMLLIAGVFSMFLPATGKKE 312 (314)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~ 312 (314)
..+..+++.+..+++||++++.
T Consensus 415 ~~~~~~i~~~~~~~~pes~~~~ 436 (490)
T PRK10642 415 LMVVAVIGLITGVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHHhccccCCC
Confidence 5556666666666678876543
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=7.5e-25 Score=194.66 Aligned_cols=287 Identities=12% Similarity=0.058 Sum_probs=198.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLV 102 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 102 (314)
+++++.++....+.++..+++...++...|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 34566677777788888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C------------------------------------
Q psy10938 103 DGLCGIASSVAQYYGVFLALRFINGFASR--------------P------------------------------------ 132 (314)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------ 132 (314)
.+++.++.++++|++.+++.|++.|++.+ |
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 99999999999999999999999988776 1
Q ss_pred --------------------CCCCCcccc---------h---hh-hhhhcCC-cCCC-------cCcc------------
Q psy10938 133 --------------------LIPGHPGKV---------A---SV-CDVSALQ-PADN-------STVA------------ 159 (314)
Q Consensus 133 --------------------l~~~~~~~~---------~---~~-~~~~~~~-~~~~-------~~~~------------ 159 (314)
+++ +++.. + +. .+..+.+ +.++ ..+.
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRD-KPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVY 256 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHH
Confidence 121 11100 0 00 0000000 0000 0000
Q ss_pred ---------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh--hh-HHHHHHHHHHHHHHHHHHHHhc--c
Q psy10938 160 ---------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM--GA-KWFLVAGLVLSSGVAMALYYVQ--T 219 (314)
Q Consensus 160 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~-~~~~~~~~~~~~~~~~~~~~~~--~ 219 (314)
+..+.+..+.+.......++..+++++.|++.||+ ++ +...........+....+...+ +
T Consensus 257 ~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK11663 257 VVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFAS 336 (434)
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccccc
Confidence 23456667777888888899999999999999998 33 3322222211111221111112 2
Q ss_pred hhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHH
Q psy10938 220 STQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIA 298 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~ 298 (314)
........+..+++.............|.+|++.|+++.|+.+...++|++++|.+.|.+.|+.+ ...+...+++.+++
T Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~ 416 (434)
T PRK11663 337 YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGIS 416 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHH
Confidence 22222222223332222222334567899999999999999999999999999999999999887 55666777776666
Q ss_pred HHHHHhc-ccCCC
Q psy10938 299 GVFSMFL-PATGK 310 (314)
Q Consensus 299 ~~~~~~~-~~~~~ 310 (314)
++..+.. +++++
T Consensus 417 ~~~~~~~~~~~~~ 429 (434)
T PRK11663 417 ALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHhhhch
Confidence 6655543 44443
No 18
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=6e-25 Score=198.78 Aligned_cols=299 Identities=18% Similarity=0.263 Sum_probs=206.7
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----ccccchhhHHhHhhHHHHHHhhhhhhhccccc
Q psy10938 16 ALAAAGYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDF-----GMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQ 90 (314)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~ 90 (314)
..|+.+.++++++.+.++.++.+.++++....+.+.|.+.+++ +.++.+.+++.+.+.+++.++++++|+++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~ 83 (502)
T TIGR00887 4 EADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL 83 (502)
T ss_pred hhhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3466778889999999999999999999999999888876642 34556779999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHhHHHHhhhH------HHHHHHHHHHhhcccC--------------C------------------
Q psy10938 91 GRKITLIGALLVDGLCGIASSVAQY------YGVFLALRFINGFASR--------------P------------------ 132 (314)
Q Consensus 91 Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~--------------P------------------ 132 (314)
|||+++..+.++..++.++++++++ ++.++++|+++|++.+ |
T Consensus 84 Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g 163 (502)
T TIGR00887 84 GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFG 163 (502)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999888765 7899999999999999 1
Q ss_pred --------------CCC-------------------C-----------------------Ccccch------h----hh-
Q psy10938 133 --------------LIP-------------------G-----------------------HPGKVA------S----VC- 145 (314)
Q Consensus 133 --------------l~~-------------------~-----------------------~~~~~~------~----~~- 145 (314)
+.. + -||... + ..
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~ 243 (502)
T TIGR00887 164 ILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAAS 243 (502)
T ss_pred HHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHH
Confidence 000 0 000000 0 00
Q ss_pred ---hhhc-----CCcC-------CC-c--C----------cc------------------------------cccCCCCh
Q psy10938 146 ---DVSA-----LQPA-------DN-S--T----------VA------------------------------TCSGEVNP 167 (314)
Q Consensus 146 ---~~~~-----~~~~-------~~-~--~----------~~------------------------------~~~~~~~~ 167 (314)
+..+ ..++ ++ . . ++ ...+.+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~ 323 (502)
T TIGR00887 244 DMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPP 323 (502)
T ss_pred HHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCC
Confidence 0000 0000 00 0 0 00 00011110
Q ss_pred hH------------HHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHH-
Q psy10938 168 EV------------FSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQT---STQNLILSCIFE- 231 (314)
Q Consensus 168 ~~------------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~- 231 (314)
.. .....+..++.+++.++.+++.||+|||+.+..+..+..+++.++....+ .........+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 403 (502)
T TIGR00887 324 AATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQF 403 (502)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 00 00122233455567788899999999999988888777766655543321 111122222222
Q ss_pred HhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh----------h-HHHHHHHHHHHHHHHH
Q psy10938 232 ALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH----------C-LILICTLAAMLLIAGV 300 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~----------~-~~~~~~~~~~~~~~~~ 300 (314)
++..+..+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.|++.|.. + ...+++++++.+++.+
T Consensus 404 ~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 404 FANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 2233445667788899999999999999999999999999999999999843 2 3567778877777766
Q ss_pred HHHhcccCCCCCCC
Q psy10938 301 FSMFLPATGKKELD 314 (314)
Q Consensus 301 ~~~~~~~~~~~~l~ 314 (314)
..+++|||++|++|
T Consensus 484 ~~~~lpEt~~~~le 497 (502)
T TIGR00887 484 FTLLIPETKGKSLE 497 (502)
T ss_pred HheEeccCCCCCHH
Confidence 66666999998753
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.94 E-value=5.7e-25 Score=194.01 Aligned_cols=261 Identities=14% Similarity=0.143 Sum_probs=190.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
|.+|+.+..+++.++.+++|+.+.+...|.+++|+|+|..+.|++.+.+.+++++++++.|+++||+|||+++..+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 45678888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhhhHHHHHHHHHHHhhcccC---C------------------------------------------------
Q psy10938 104 GLCGIASSVAQYYGVFLALRFINGFASR---P------------------------------------------------ 132 (314)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~---P------------------------------------------------ 132 (314)
+++.+++++++|++++++.|+++|++.+ |
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999998 1
Q ss_pred ------------------------CCCCCcccc--------hhhhhhh-------cCCc----CCC----------cCcc
Q psy10938 133 ------------------------LIPGHPGKV--------ASVCDVS-------ALQP----ADN----------STVA 159 (314)
Q Consensus 133 ------------------------l~~~~~~~~--------~~~~~~~-------~~~~----~~~----------~~~~ 159 (314)
.-++.|++. +...+.. ++.+ +.. ..+.
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPA 243 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChH
Confidence 011111110 0000000 0000 000 0000
Q ss_pred --------------------------cc--cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHH-HHHHHHHHHHH
Q psy10938 160 --------------------------TC--SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWF-LVAGLVLSSGV 210 (314)
Q Consensus 160 --------------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-~~~~~~~~~~~ 210 (314)
.. .+.+....+.......++.+++.++.|+++||+++|+. .........+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~ 323 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAG 323 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHH
Confidence 12 23455677777888899999999999999999987664 33333344443
Q ss_pred HHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 211 AMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
..+.....+.........+..++.....+.......|.+|++.|+++.|+.+...++|++++|.+.|.+.|..+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 324 WLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 33332222222222222222222222334445566788999999999999999999999999999999999875
No 20
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=4.8e-24 Score=189.61 Aligned_cols=284 Identities=14% Similarity=0.155 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccccc--ccccchhhHHh-----HhhHHHHHHhhhhhhhcccccchhHHH
Q psy10938 25 FHYILVIFGGLLYAYAAISITVLSFVLPS-AQCDF--GMTSSDKGWLN-----AAPMLGMVFGSYFWGCLADTQGRKITL 96 (314)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~g~~~-----s~~~~~~~i~~~~~g~l~dr~Grr~~l 96 (314)
++++.+...+++.+++++|...++.+.|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 44567777888999999999999888774 45555 66665 45553 355677889999999999999999999
Q ss_pred HHHHHHHHHHhHHHHhhhHHH--------HHHHHHHHhhcccC--------------C----------------------
Q psy10938 97 IGALLVDGLCGIASSVAQYYG--------VFLALRFINGFASR--------------P---------------------- 132 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~--------------P---------------------- 132 (314)
..+..+++++.+++++++|++ .+++.|+++|++.| |
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 58899999999998 1
Q ss_pred -------------------------------------CCCCCcccchh--hh-hhhcCCcCCC------cCcc-------
Q psy10938 133 -------------------------------------LIPGHPGKVAS--VC-DVSALQPADN------STVA------- 159 (314)
Q Consensus 133 -------------------------------------l~~~~~~~~~~--~~-~~~~~~~~~~------~~~~------- 159 (314)
+.+..+|.++. .+ +..+.++... +.+.
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 257 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIA 257 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHH
Confidence 01101111000 00 0000000000 0000
Q ss_pred ---------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH--
Q psy10938 160 ---------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYY-- 216 (314)
Q Consensus 160 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-- 216 (314)
+..+.+...........++...++.++.|+++||+|||+.+..+.++..++.+.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 337 (438)
T PRK09952 258 LRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMAL 337 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 122333333333444556667778889999999999999888776665554433322
Q ss_pred -hcchh-HHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhh-hhhhhHHHHHHHHHhhh-h--HHHHHH
Q psy10938 217 -VQTST-QNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGR-FGGLTGNLMFGFLIDGH-C--LILICT 290 (314)
Q Consensus 217 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~g~~~~p~~~g~l~~~~-~--~~~~~~ 290 (314)
..+.. ......++.+++.+...+..+++.+|.+|++.|+++.|+.+..+. +++.++|.+.|.+.|.. + ...+..
T Consensus 338 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~ 417 (438)
T PRK09952 338 EAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIY 417 (438)
T ss_pred HcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence 11222 222233444556666677788899999999999999999776655 89999999999998854 2 345556
Q ss_pred HHHHHHHHHHHHHhcccCC
Q psy10938 291 LAAMLLIAGVFSMFLPATG 309 (314)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~ 309 (314)
.+++.+++.+..+..+|++
T Consensus 418 ~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 418 LLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHccccc
Confidence 6666777666666666654
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=8.7e-25 Score=194.19 Aligned_cols=287 Identities=15% Similarity=0.086 Sum_probs=183.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc---cccchhhHH---hHhhHHHHHHhhhhhhhcccccchhHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFG---MTSSDKGWL---NAAPMLGMVFGSYFWGCLADTQGRKITLI 97 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~g~~---~s~~~~~~~i~~~~~g~l~dr~Grr~~l~ 97 (314)
+++++.+...+++.+++++|...++...|.+.+|++ .+..+.+.. .+..+++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345556677778899999999999999999999985 455544444 44445555599999999999999999999
Q ss_pred HHHHHHHHHhHHHHhhhHHH--------HHHHHHHHhhcccC--------------C-----------------------
Q psy10938 98 GALLVDGLCGIASSVAQYYG--------VFLALRFINGFASR--------------P----------------------- 132 (314)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~--------------P----------------------- 132 (314)
.+..+++++++++++++++. .+++.|+++|++.| |
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764 58999999999988 1
Q ss_pred ------------------------------------CCCCCcccch----------hhhhhhcCCcCCCcCc------c-
Q psy10938 133 ------------------------------------LIPGHPGKVA----------SVCDVSALQPADNSTV------A- 159 (314)
Q Consensus 133 ------------------------------------l~~~~~~~~~----------~~~~~~~~~~~~~~~~------~- 159 (314)
+....+|.++ +..+.+++++...... .
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 257 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSL 257 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHH
Confidence 0000000000 0001111000000000 0
Q ss_pred --------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH--Hh--cchh
Q psy10938 160 --------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY--YV--QTST 221 (314)
Q Consensus 160 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~--~~--~~~~ 221 (314)
+..+.+..+.+....+..+...++..+.|+++||++||+.+.....+..+...... .. .+..
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPY 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 22345555666666676777778888899999999999887766554433332221 11 1222
Q ss_pred HHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhh-hhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHH
Q psy10938 222 QNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRF-GGLTGNLMFGFLIDGHC--LILICTLAAMLLIA 298 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~ 298 (314)
.......+..+..+...+..+.+.+|.+|++.|+++.|+.+..+++ .+...|++.+.+ +..+ ...++..++..+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~ 416 (432)
T PRK10406 338 AAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVA 416 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHH
Confidence 2222222222233333455667889999999999999999988774 355588888754 5544 33444455555555
Q ss_pred HHHHHhcccCCCCC
Q psy10938 299 GVFSMFLPATGKKE 312 (314)
Q Consensus 299 ~~~~~~~~~~~~~~ 312 (314)
.+..+++ ++++|+
T Consensus 417 ~~~~~~l-~~~~~~ 429 (432)
T PRK10406 417 FLVSLML-HRKGKG 429 (432)
T ss_pred HHHHHHh-hhcccc
Confidence 5554443 444444
No 22
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.1e-24 Score=195.76 Aligned_cols=285 Identities=19% Similarity=0.251 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccc--------cchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHH
Q psy10938 29 LVIFGGLLYAYAAISITVLSFVLPSAQCDFGMT--------SSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGAL 100 (314)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 100 (314)
...++.++.+...++...+.+..|.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||+++..+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~ 108 (481)
T TIGR00879 29 LSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIA 108 (481)
T ss_pred HHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHH
Confidence 333444555677788888888899988888777 789999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHhh---hHHHHHHHHHHHhhcccC--------------C-------------------------------
Q psy10938 101 LVDGLCGIASSVA---QYYGVFLALRFINGFASR--------------P------------------------------- 132 (314)
Q Consensus 101 ~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~--------------P------------------------------- 132 (314)
++..++.+++.+. .+++.+++.|+++|++.+ |
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~ 188 (481)
T TIGR00879 109 LLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS 188 (481)
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999988554 445689999999999988 1
Q ss_pred ---------------------------CCCCC-----cccchh----hhhhhcC--------------------------
Q psy10938 133 ---------------------------LIPGH-----PGKVAS----VCDVSAL-------------------------- 150 (314)
Q Consensus 133 ---------------------------l~~~~-----~~~~~~----~~~~~~~-------------------------- 150 (314)
+++.. +++.++ ..+..+.
T Consensus 189 ~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (481)
T TIGR00879 189 LNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQ 268 (481)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcc
Confidence 11110 000000 0000000
Q ss_pred ------CcCCCc-Ccc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhh
Q psy10938 151 ------QPADNS-TVA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGA 196 (314)
Q Consensus 151 ------~~~~~~-~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 196 (314)
....+. ... ...+.+....+.......++.+++.++.+++.||++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 348 (481)
T TIGR00879 269 PSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGR 348 (481)
T ss_pred ccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000000 000 2334555566777778888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH---hc-c------hhHHHHHHHHHHH-hhhhhchhheeeecccccchhhHHHHHHHHhhh
Q psy10938 197 KWFLVAGLVLSSGVAMALYY---VQ-T------STQNLILSCIFEA-LTGCCISVVYCIMVDLFPTNLRVLAAALSSTFG 265 (314)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~---~~-~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 265 (314)
|+.+..+..+..++.+.+.+ .. + .+.......+... ......+....+..|.+|++.|+++.|+.+...
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 428 (481)
T TIGR00879 349 RPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAAN 428 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHH
Confidence 99988887777777666542 11 1 2222222222222 233344556677899999999999999999999
Q ss_pred hhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh-cccCCCCCC
Q psy10938 266 RFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF-LPATGKKEL 313 (314)
Q Consensus 266 ~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 313 (314)
++|++++|.+.|.+.+..+ ...+++.+++.+++.++..+ .||+++++.
T Consensus 429 ~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 429 WLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 9999999999999999866 45567777777776666554 488776654
No 23
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=1.3e-24 Score=190.80 Aligned_cols=273 Identities=16% Similarity=0.138 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc-cccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPS-AQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGI 108 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 108 (314)
+..+....++.........|.+|. +.+|+|.|..+.|++.+++.+++.++++++|+++||+||||++..+.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333444556666667777788886 5789999999999999999999999999999999999999999999887776654
Q ss_pred HHH--------hhhHHHHHHHHHHHhhcccC--------------C----------------------------------
Q psy10938 109 ASS--------VAQYYGVFLALRFINGFASR--------------P---------------------------------- 132 (314)
Q Consensus 109 ~~~--------~~~~~~~l~~~r~l~G~~~~--------------P---------------------------------- 132 (314)
... ..+|++.+++.|+++|++.+ |
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 322 24688999999999999987 1
Q ss_pred ---------------------CCCCCcccc--hhhhhhhcCCcCCCcCcc-----------------cccCCCChhHHHH
Q psy10938 133 ---------------------LIPGHPGKV--ASVCDVSALQPADNSTVA-----------------TCSGEVNPEVFSH 172 (314)
Q Consensus 133 ---------------------l~~~~~~~~--~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 172 (314)
.++.+++++ .+.++..+.......... .+.+. ...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 254 (392)
T PRK12382 177 FAALALTTMVLPLLAWAFNGTVRKVPAHAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVSLYFASKGW--AMAGFT 254 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCcccCchHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHhcCC--chhHHH
Confidence 011101000 001111100000000000 11222 234445
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccch
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTN 252 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 252 (314)
.....++.+++++..|++.||+|+|+.+..+..+..+..++..+.++.+......++.+++.+...+.......|..|++
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 334 (392)
T PRK12382 255 LTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ 334 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH
Confidence 55667778889999999999999999888888888877777766666655555566677777777777778888999999
Q ss_pred hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 253 LRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 253 ~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
+|+++.|+.+...++|..++|.+.|.+.|+.+ ...+...+.+.+++.+..+.
T Consensus 335 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 335 VRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999887 45566666666665555443
No 24
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=1.9e-24 Score=194.79 Aligned_cols=291 Identities=18% Similarity=0.211 Sum_probs=202.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--------ccccchhhHHhHhhHHHHHHhhhhhhhcccccchhH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDF--------GMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKI 94 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 94 (314)
.+++++..++..++.+.++++...+++..|.+++++ +.++.+.+++.+.+.++..++++++|+++||+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 345677777788888999999999998888887776 888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHhh------------hHHHHHHHHHHHhhcccC--------------C----------------
Q psy10938 95 TLIGALLVDGLCGIASSVA------------QYYGVFLALRFINGFASR--------------P---------------- 132 (314)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~--------------P---------------- 132 (314)
+++.+..++.++.+.++++ ++++.+++.|+++|++.| |
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999999988887763 336778899999999998 1
Q ss_pred -----------------------------------------------CCCCCc-----ccchh-----------------
Q psy10938 133 -----------------------------------------------LIPGHP-----GKVAS----------------- 143 (314)
Q Consensus 133 -----------------------------------------------l~~~~~-----~~~~~----------------- 143 (314)
+++..+ ++.++
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 111100 00000
Q ss_pred hhh---hhcCCcCCCcC---cc------------------------------cccCCCChhHHHHHHHHHhhhhhHHhHH
Q psy10938 144 VCD---VSALQPADNST---VA------------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAM 187 (314)
Q Consensus 144 ~~~---~~~~~~~~~~~---~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (314)
..+ ..+.+.++... .. ...+.+...........++..+++.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 326 (479)
T PRK10077 247 LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLA 326 (479)
T ss_pred HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 000 00000000000 00 0112223334445556677888899999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc--ch-h-HHHHHHHHHHHhhhh-hchhheeeecccccchhhHHHHHHHH
Q psy10938 188 PLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ--TS-T-QNLILSCIFEALTGC-CISVVYCIMVDLFPTNLRVLAAALSS 262 (314)
Q Consensus 188 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~ 262 (314)
+++.||+|||+.+..+..+.+++.+++.... +. . ......++.+++.+. ..+..+.++.|.+|++.|+++.|+.+
T Consensus 327 g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~ 406 (479)
T PRK10077 327 IMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAV 406 (479)
T ss_pred HHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHH
Confidence 9999999999999988888888776654331 21 1 112222233333332 33667899999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHH------hhhh-HHHHHHHHHHHHHHHHHHH-hcccCCCCCC
Q psy10938 263 TFGRFGGLTGNLMFGFLI------DGHC-LILICTLAAMLLIAGVFSM-FLPATGKKEL 313 (314)
Q Consensus 263 ~~~~~g~~~~p~~~g~l~------~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 313 (314)
...++++++++.+.+.+. |..+ ...+++.+++.+++.++.+ +.||+|++++
T Consensus 407 ~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 465 (479)
T PRK10077 407 AAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL 465 (479)
T ss_pred HHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCH
Confidence 999999999988876555 3444 4566666766666666554 4488887653
No 25
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=1.1e-23 Score=188.29 Aligned_cols=288 Identities=13% Similarity=0.150 Sum_probs=192.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLV 102 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 102 (314)
++++|.++...++.....+.++..+++..|.+.++ |+|+.+.+++.+.+.+++.++++++|+++||+|||++++.+..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 44556666666677777778877788889999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhh----HHHHHHHHHHHhhcccC---C-------------------------------------------
Q psy10938 103 DGLCGIASSVAQ----YYGVFLALRFINGFASR---P------------------------------------------- 132 (314)
Q Consensus 103 ~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~---P------------------------------------------- 132 (314)
.+++.+++++++ +++.+++.|++.|++.+ |
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 999998888764 78888999999998877 1
Q ss_pred -------------------------CCCCCcc-----cchhhhh---hhcCC-cC----CC-------cCcc--------
Q psy10938 133 -------------------------LIPGHPG-----KVASVCD---VSALQ-PA----DN-------STVA-------- 159 (314)
Q Consensus 133 -------------------------l~~~~~~-----~~~~~~~---~~~~~-~~----~~-------~~~~-------- 159 (314)
++++.++ +++...+ ..+.. .. ++ +.+.
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIAN 262 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 1211110 0000000 00000 00 00 0000
Q ss_pred -------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh--hhHHHH-HHHHHHHHHHHHHHHHh
Q psy10938 160 -------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM--GAKWFL-VAGLVLSSGVAMALYYV 217 (314)
Q Consensus 160 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~-~~~~~~~~~~~~~~~~~ 217 (314)
+..+.+....+.......++.+++.++.|+++||+ +||... .....+..+..+.+...
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~ 342 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN 342 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 22455666777777788888999999999999999 455432 22222223333332222
Q ss_pred c--chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhh-HHHHHHHHHhhhh-HHHHHHHHH
Q psy10938 218 Q--TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLT-GNLMFGFLIDGHC-LILICTLAA 293 (314)
Q Consensus 218 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~-~p~~~g~l~~~~~-~~~~~~~~~ 293 (314)
+ +.+.........+............+..|.+|++.|+++.|+.+...++|+.+ +|.+.|.+.|+.+ ...|++.++
T Consensus 343 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~ 422 (452)
T PRK11273 343 PAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG 422 (452)
T ss_pred cccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHH
Confidence 2 22222222233333322222333445679999999999999999999988765 7999999999987 556667777
Q ss_pred HHHHHHHHHHhc--ccCCCC
Q psy10938 294 MLLIAGVFSMFL--PATGKK 311 (314)
Q Consensus 294 ~~~~~~~~~~~~--~~~~~~ 311 (314)
+++++.+...++ +|+|++
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 423 GSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred HHHHHHHHHHHHhccccchH
Confidence 777766655543 455443
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.93 E-value=4e-24 Score=193.49 Aligned_cols=270 Identities=16% Similarity=0.232 Sum_probs=200.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLV 102 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 102 (314)
++++|+.+..+++.++.+.++....++..|.+.+++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45677788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C------------------------------------
Q psy10938 103 DGLCGIASSVAQYYGVFLALRFINGFASR--------------P------------------------------------ 132 (314)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------ 132 (314)
.+++.++..+++|++.+++.|++.|++.+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 99999999999999999999999999876 1
Q ss_pred -------------------CCCCCc---c--cch---hhhhhh-cCCcC-------------------------------
Q psy10938 133 -------------------LIPGHP---G--KVA---SVCDVS-ALQPA------------------------------- 153 (314)
Q Consensus 133 -------------------l~~~~~---~--~~~---~~~~~~-~~~~~------------------------------- 153 (314)
+++..+ + ++. +..+.. +.++.
T Consensus 175 ~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (496)
T PRK03893 175 ALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVL 254 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHH
Confidence 011100 0 000 000000 00000
Q ss_pred ----------------CCcC------------------------cc---cccCCCChhHHHHHHHHHhhhhhHHhHHHHH
Q psy10938 154 ----------------DNST------------------------VA---TCSGEVNPEVFSHTLIIGLACIPSSLAMPLL 190 (314)
Q Consensus 154 ----------------~~~~------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 190 (314)
.... +. ...+.+..+.+.......++.+++.++.|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l 334 (496)
T PRK03893 255 GLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFL 334 (496)
T ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 2345566777888888899999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhcchh--HHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhh
Q psy10938 191 VHKMGAKWFLVAGLVLSSGVAMALYYVQTST--QNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFG 268 (314)
Q Consensus 191 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g 268 (314)
.||+|+|+.+..+..+..+..+......+.. ......+..+.......+....+..|.+|++.|++++|+.+....+|
T Consensus 335 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 414 (496)
T PRK03893 335 GDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALG 414 (496)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHH
Confidence 9999999988777666655544433332222 22222222233333344566678889999999999999999999999
Q ss_pred hhhHHHHHHHHHhhhhH-HHHHHHH
Q psy10938 269 GLTGNLMFGFLIDGHCL-ILICTLA 292 (314)
Q Consensus 269 ~~~~p~~~g~l~~~~~~-~~~~~~~ 292 (314)
+.++|.+.|.+.|..+. ..+...+
T Consensus 415 ~~lgp~l~g~l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 415 GALAPILGALIAQRLDLGTALASLS 439 (496)
T ss_pred HHHHHHHHHHHhccCChHHHHHHHH
Confidence 99999999999998773 3443333
No 27
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=1.2e-23 Score=181.50 Aligned_cols=271 Identities=25% Similarity=0.304 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh
Q psy10938 33 GGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 112 (314)
.....+....+.....+..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.+...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 44566777788888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhcccCCC------------CCCCcccchhhhh----------------hhcCCcCCCc--------
Q psy10938 113 AQYYGVFLALRFINGFASRPL------------IPGHPGKVASVCD----------------VSALQPADNS-------- 156 (314)
Q Consensus 113 ~~~~~~l~~~r~l~G~~~~Pl------------~~~~~~~~~~~~~----------------~~~~~~~~~~-------- 156 (314)
+++++.+++.|++.|++.+.. ++++......... ..+....+..
T Consensus 84 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (352)
T cd06174 84 ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILG 163 (352)
T ss_pred hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999998810 1100000000000 0000000000
Q ss_pred ----------Ccc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHH-
Q psy10938 157 ----------TVA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKW- 198 (314)
Q Consensus 157 ----------~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~- 198 (314)
.+. +..+.+..+.+.......++..++.++.+++.||++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (352)
T cd06174 164 LLLALLLLFLLRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL 243 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 000 222567778888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHH
Q psy10938 199 FLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGF 278 (314)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~ 278 (314)
.+..+..+..++.+.....++.+......++.+++.+...+....+..|..|+++|++..|+.+...+++..++|.+.|.
T Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~ 323 (352)
T cd06174 244 LLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGL 323 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889988888888888877777777778888888999999999999999999999999999999999999999999999
Q ss_pred HHhhhh-HHHHHHHHHHHHHHHHHHH
Q psy10938 279 LIDGHC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 279 l~~~~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
+.|..+ ...+.+.+++.+++.+...
T Consensus 324 l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 324 LLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HhcccCcchHHHHHHHHHHHHHHHhe
Confidence 998766 5566777777666655543
No 28
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=2.1e-23 Score=184.09 Aligned_cols=273 Identities=22% Similarity=0.250 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccccccch-----hhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHH
Q psy10938 32 FGGLLYAYAAISITVLSFVLPSAQCDFGMTSSD-----KGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLC 106 (314)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 106 (314)
..+.+.+..........+.+|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||+++..+..+..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 344556666777777888999999999998765 489999999999999999999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHHhhcccC--C----------------------------------------------------
Q psy10938 107 GIASSVAQYYGVFLALRFINGFASR--P---------------------------------------------------- 132 (314)
Q Consensus 107 ~~~~~~~~~~~~l~~~r~l~G~~~~--P---------------------------------------------------- 132 (314)
.++..++++++.+++.|++.|++.+ |
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 177 (408)
T PRK09874 98 MVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFI 177 (408)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 9999999999999999999998766 1
Q ss_pred ---------------CCCC-Ccccc---hhhhhhhcCCcCCCcCcc-----------------------cccCCCCh---
Q psy10938 133 ---------------LIPG-HPGKV---ASVCDVSALQPADNSTVA-----------------------TCSGEVNP--- 167 (314)
Q Consensus 133 ---------------l~~~-~~~~~---~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~--- 167 (314)
++++ +++++ .+.++..+..++++.... ........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (408)
T PRK09874 178 TASVLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIA 257 (408)
T ss_pred HHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 1211 11111 111111111111111000 11111111
Q ss_pred -hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 168 -EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 168 -~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
..+.......++..++.+..|++.||++||+.+..+.....+..+...+.++.+......++.+++.+...+...+...
T Consensus 258 ~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 258 FISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 1233444556677788888999999999999988888877777766666666666666666777788888888888888
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
+..|++.+++.+++.+....+|..++|.+.|.+.|..+ ...|.+.+++.+++.+...+
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999877 56677777777776665554
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.92 E-value=1.3e-23 Score=183.90 Aligned_cols=274 Identities=13% Similarity=0.053 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
+.......+..+.......+.+|.+++|+|.|..+.|++.+.+.+++.++++++|+++||+|||+++..+..+.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 44455666777788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhhcccC--------------C-------------------------------------------
Q psy10938 110 SSVAQYYGVFLALRFINGFASR--------------P------------------------------------------- 132 (314)
Q Consensus 110 ~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------------- 132 (314)
+++++|++++++.|++.|++.+ |
T Consensus 85 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 164 (382)
T PRK10091 85 FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIA 164 (382)
T ss_pred HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHH
Confidence 9999999999999999999877 0
Q ss_pred -------------CCCCCcccchhhhhhhcCCcCCCcCcc-----------------------cccCCCChhHHHHHHHH
Q psy10938 133 -------------LIPGHPGKVASVCDVSALQPADNSTVA-----------------------TCSGEVNPEVFSHTLII 176 (314)
Q Consensus 133 -------------l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~ 176 (314)
+++.+++++.+.++..+..+++..... +..+.+..+.+......
T Consensus 165 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 244 (382)
T PRK10091 165 VFNIAVLASIYFWVPDIRDEAKGGLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLV 244 (382)
T ss_pred HHHHHHHHHHHHhCCCCCcccccCHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 121111111111111111000000000 23456677788888889
Q ss_pred HhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHhhhhhchhhe-eeecccccchhh
Q psy10938 177 GLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYY-VQTSTQNLILSCIFEALTGCCISVVY-CIMVDLFPTNLR 254 (314)
Q Consensus 177 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~r 254 (314)
.++.++++++.+++.||+++|+.+..+..+..+..+++.. .++.+......++.+.+.....+... ....+..|++.+
T Consensus 245 ~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (382)
T PRK10091 245 GLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELL 324 (382)
T ss_pred HHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHH
Confidence 9999999999999999999999888888777776655543 33333333333344443333333332 334444455555
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHHhhh-h-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 255 VLAAALSSTFGRFGGLTGNLMFGFLIDGH-C-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 255 ~~~~g~~~~~~~~g~~~~p~~~g~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
+.+ ..+...++|.+++|.+.|.+.|.. + ...+...+.+..+........
T Consensus 325 ~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 325 GAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 544 346677899999999999999974 3 344444444444444333333
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=2.2e-23 Score=187.02 Aligned_cols=286 Identities=15% Similarity=0.144 Sum_probs=198.8
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHH
Q psy10938 16 ALAAAGYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKIT 95 (314)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~ 95 (314)
+.+..+.++++++.+.......+...++.....+..|.+.+|+|+|..+.+++.+.+.+++.+++++.|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~ 103 (476)
T PLN00028 24 EFRLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG 103 (476)
T ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 33444455666677777777777777888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC-------------C------------------------------
Q psy10938 96 LIGALLVDGLCGIASSVAQYYGVFLALRFINGFASR-------------P------------------------------ 132 (314)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~-------------P------------------------------ 132 (314)
+..+.++.+++.++.+++++++.+++.|++.|++.+ |
T Consensus 104 ~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~ 183 (476)
T PLN00028 104 SAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVF 183 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998877 1
Q ss_pred ----------------------------------CCCCCcccchhhhhhhcCCc-CC----C------cCcc--------
Q psy10938 133 ----------------------------------LIPGHPGKVASVCDVSALQP-AD----N------STVA-------- 159 (314)
Q Consensus 133 ----------------------------------l~~~~~~~~~~~~~~~~~~~-~~----~------~~~~-------- 159 (314)
+.++.|+.+ ..+..+..+ ++ . ....
T Consensus 184 ~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (476)
T PLN00028 184 PLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--YRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTY 261 (476)
T ss_pred HHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--hhhHHhcCccccccHHHHHHHHHcCchhHHHHHHH
Confidence 011111100 000000000 00 0 0000
Q ss_pred -------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH-------HHHHHHHHHHHHHHHH
Q psy10938 160 -------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK-------WFLVAGLVLSSGVAMA 213 (314)
Q Consensus 160 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~~~~~~ 213 (314)
+..+.+..+++....+..++..++++++|+++||++|| ........+.++..++
T Consensus 262 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~ 341 (476)
T PLN00028 262 GYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIW 341 (476)
T ss_pred HHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHH
Confidence 22356667778888888999999999999999999865 2333333333333333
Q ss_pred HHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHH
Q psy10938 214 LYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLA 292 (314)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~ 292 (314)
+...++.+......++.+++.....+..+++..+.. +++++++.|+.+..+++|+.++|.+.+ ..+..+ ...+++.+
T Consensus 342 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~ 419 (476)
T PLN00028 342 LGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMG 419 (476)
T ss_pred hcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHH
Confidence 333434333344444555555556666677777765 478999999998887788777777654 112222 45677777
Q ss_pred HHHHHHHHHHHhc
Q psy10938 293 AMLLIAGVFSMFL 305 (314)
Q Consensus 293 ~~~~~~~~~~~~~ 305 (314)
++.+++.++.++.
T Consensus 420 ~~~~i~~~~~~~~ 432 (476)
T PLN00028 420 VMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHHHhe
Confidence 7777777766655
No 31
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.92 E-value=7.8e-23 Score=179.05 Aligned_cols=281 Identities=11% Similarity=0.086 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-ccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 25 FHYILVIFGGLLYAYAAISITVLSFVLPSAQC-DFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
-.++.+.+..+..+.....+..++++.+.+.+ |+|+|++|.+++.+++.+++.++.++.|++.||+|.|+++..+.++.
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34567777888888889999999999998876 89999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhh-----hHHHHHHHHHHHhhcccC-------------C---------------------------------
Q psy10938 104 GLCGIASSVA-----QYYGVFLALRFINGFASR-------------P--------------------------------- 132 (314)
Q Consensus 104 ~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~-------------P--------------------------------- 132 (314)
.+..+..+++ +|++.+++.|++.|++.+ |
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999987 899999999999999844 1
Q ss_pred C-C---------------------------------------CCCcccchhhhhhhcCCcCCCcC-cc------------
Q psy10938 133 L-I---------------------------------------PGHPGKVASVCDVSALQPADNST-VA------------ 159 (314)
Q Consensus 133 l-~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~------------ 159 (314)
+ . ++.++++.+.++..+..+++... ..
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg 270 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIG 270 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCHHHHHHHhCCCchhHHHHHHHHHHHHHHH
Confidence 0 0 00000000011110000000000 00
Q ss_pred --------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HHhc-----chhHHHH
Q psy10938 160 --------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL-YYVQ-----TSTQNLI 225 (314)
Q Consensus 160 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~ 225 (314)
....++.........+..+...+.++++|+++||+|+++++.++.+...++.... ...+ +.+....
T Consensus 271 ~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~ 350 (462)
T PRK15034 271 FSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYA 350 (462)
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 0112222222223344456778888999999999999999988887776665432 2232 1233333
Q ss_pred HHHHHHHhhhhhchhheeeecccccc---------------------hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 226 LSCIFEALTGCCISVVYCIMVDLFPT---------------------NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
..+...++.+..+...+-++++.+|+ ++-|.+.|+....+.+|+.+.|.+.|...+..|
T Consensus 351 ~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g 430 (462)
T PRK15034 351 VFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG 430 (462)
T ss_pred HHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC
Confidence 33334455666666777777777764 156889999999999999999999999998876
Q ss_pred --HHHHHHHHHHHHHHHHHHHhc
Q psy10938 285 --LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 285 --~~~~~~~~~~~~~~~~~~~~~ 305 (314)
...++.+.+..+++..+.++.
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 431 SPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 455777777777777776544
No 32
>PRK15075 citrate-proton symporter; Provisional
Probab=99.92 E-value=2.6e-23 Score=184.86 Aligned_cols=259 Identities=15% Similarity=0.128 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHH-hHhh-----HHHHHHhhhhhhhcccccchhHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWL-NAAP-----MLGMVFGSYFWGCLADTQGRKITLIGA 99 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~-~s~~-----~~~~~i~~~~~g~l~dr~Grr~~l~~~ 99 (314)
+++....++++.+++++|+..+++..|.+.+|++.++.+.+.+ .+.. .++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 3456777888999999999999999999999999988876543 3322 233357899999999999999999999
Q ss_pred HHHHHHHhHHHHhhhHHH--------HHHHHHHHhhcccC--------------C-------------------------
Q psy10938 100 LLVDGLCGIASSVAQYYG--------VFLALRFINGFASR--------------P------------------------- 132 (314)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~--------------P------------------------- 132 (314)
..++.++.++++++++++ .+++.|+++|++.+ |
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 46889999999987 1
Q ss_pred ----------------------------------CCCCCcccchhhhhhhcCCcCC-----CcCcc--------------
Q psy10938 133 ----------------------------------LIPGHPGKVASVCDVSALQPAD-----NSTVA-------------- 159 (314)
Q Consensus 133 ----------------------------------l~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------------- 159 (314)
+.+..++.++...+..+....+ .+...
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTV 252 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 0111111100000000000000 00000
Q ss_pred --------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHH-HH-HHhcch--h
Q psy10938 160 --------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAM-AL-YYVQTS--T 221 (314)
Q Consensus 160 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~-~~-~~~~~~--~ 221 (314)
+..+.+..+.........++.+++.++.|+++||+|||+....+..+..+... .. ....+. .
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFA 332 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 12455666667777788888999999999999999999987766544433221 11 111221 1
Q ss_pred HHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhh-hhhhhHHHHHHHHHhhhh
Q psy10938 222 QNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGR-FGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~g~~~~p~~~g~l~~~~~ 284 (314)
.......+.+++.+...+....+..|.+|++.|+++.|+.+..+. +++.++|.+.|.+.|..+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 333 RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 222223334445555556566788999999999999999766666 458889999999999876
No 33
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=9.6e-24 Score=190.47 Aligned_cols=256 Identities=18% Similarity=0.179 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGL 105 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 105 (314)
+|..+..+++..++...|.+.++..+|.+.+|+|.+.++.+|+.+.|.+++.++++++|+++||+|||++++.+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46678888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhcccC---C--------------------------------------------------
Q psy10938 106 CGIASSVAQYYGVFLALRFINGFASR---P-------------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~l~~~r~l~G~~~~---P-------------------------------------------------- 132 (314)
+.+++++++|+++++++|+++|++.+ |
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~ 163 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSV 163 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH
Confidence 99999999999999999999999887 1
Q ss_pred ------------------CCCCCccc--chhhhh-----------------hh-------------------------cC
Q psy10938 133 ------------------LIPGHPGK--VASVCD-----------------VS-------------------------AL 150 (314)
Q Consensus 133 ------------------l~~~~~~~--~~~~~~-----------------~~-------------------------~~ 150 (314)
++++.+++ +..... .. .+
T Consensus 164 f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e 243 (495)
T PRK14995 164 FLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQ 243 (495)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 12211111 000000 00 00
Q ss_pred Cc-CC---------CcCcc-------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhh
Q psy10938 151 QP-AD---------NSTVA-------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMG 195 (314)
Q Consensus 151 ~~-~~---------~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 195 (314)
.+ .+ ..... ...+.++.+++.......++..++.++.|++.||+|
T Consensus 244 ~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g 323 (495)
T PRK14995 244 LAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLG 323 (495)
T ss_pred hcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 00 00 00000 235677788888888888999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhH
Q psy10938 196 AKWFLVAGLVLSSGVAMALYYV---QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTG 272 (314)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~ 272 (314)
+|+.+..+..+..++...+... ++.+......++.+++.+...+.......+..|+++++.+.++.+...++|+.+|
T Consensus 324 ~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G 403 (495)
T PRK14995 324 LRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLG 403 (495)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHH
Confidence 9998888887777666555433 2333445556677888888888888888888999999999999999999999999
Q ss_pred HHHHHHHHh
Q psy10938 273 NLMFGFLID 281 (314)
Q Consensus 273 p~~~g~l~~ 281 (314)
+.+.|.+.+
T Consensus 404 ~ai~g~i~~ 412 (495)
T PRK14995 404 IAIFGLLLS 412 (495)
T ss_pred HHHHHHHHH
Confidence 999998865
No 34
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=9.9e-24 Score=182.79 Aligned_cols=264 Identities=14% Similarity=0.057 Sum_probs=174.1
Q ss_pred HHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHH
Q psy10938 40 AAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVF 119 (314)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 119 (314)
+...+..+++.+|.+++|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+......++|++++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 45667788899999999999999999999999999999999999999999999998776655555544333344799999
Q ss_pred HHHHHHhhcccC-------------C------------------------------------------------------
Q psy10938 120 LALRFINGFASR-------------P------------------------------------------------------ 132 (314)
Q Consensus 120 ~~~r~l~G~~~~-------------P------------------------------------------------------ 132 (314)
++.|+++|++.+ |
T Consensus 83 ~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 83 LACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 1
Q ss_pred --CCCCCcccch---------hhhhhhcCCcCCCcCcc-------------------cccCCCChhHHHHHHHHHhhhhh
Q psy10938 133 --LIPGHPGKVA---------SVCDVSALQPADNSTVA-------------------TCSGEVNPEVFSHTLIIGLACIP 182 (314)
Q Consensus 133 --l~~~~~~~~~---------~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 182 (314)
+++.++++++ +.++.++++........ ...+.+. ..+....+..+.+.
T Consensus 163 ~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~~~~~~~l~~~~g~- 240 (368)
T TIGR00903 163 AALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-IAGDAVALAILAGL- 240 (368)
T ss_pred HHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-HHHHHHHHHHHHHH-
Confidence 1221111100 01111111110000000 2233333 24444444444444
Q ss_pred HHhHHHHHHHHhhhH---HH-HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHH
Q psy10938 183 SSLAMPLLVHKMGAK---WF-LVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAA 258 (314)
Q Consensus 183 ~~~~~g~l~d~~g~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~ 258 (314)
+..+++.||..|| +. ......+.++.+..+.+..+.........+.+++.....+..+++.+|.+|++.|+++.
T Consensus 241 --~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~ 318 (368)
T TIGR00903 241 --IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAA 318 (368)
T ss_pred --HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCccc
Confidence 4457888887543 32 22233344444444444444444444455566666777777889999999999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 259 ALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 259 g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
|+.+..+++++..+|++.+.+.. .-...|..+++..+++.+....++++
T Consensus 319 G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~i~~~~~~~~~~~ 367 (368)
T TIGR00903 319 GAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAILITIAFAIALLLPND 367 (368)
T ss_pred chhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998884 22456777777777777665544443
No 35
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=7e-23 Score=179.68 Aligned_cols=272 Identities=13% Similarity=0.075 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGL 105 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 105 (314)
.|+.+..+..+.+..........+.+|++.+|+|+++.+.|+..+.+.++..+++++.|+++||+|||+++..+..+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 55555555555555555555666778999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhcccC---C--------------------------------------------------
Q psy10938 106 CGIASSVAQYYGVFLALRFINGFASR---P-------------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~l~~~r~l~G~~~~---P-------------------------------------------------- 132 (314)
+.+++.+++|++.+++.|+++|++.+ |
T Consensus 98 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 177 (394)
T PRK10213 98 SCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVF 177 (394)
T ss_pred HHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 99999999999999999999999988 1
Q ss_pred -----------------CCCCCcccchh---hhhhhcCCcCCCcCcc--------------------cccCCCChhHHHH
Q psy10938 133 -----------------LIPGHPGKVAS---VCDVSALQPADNSTVA--------------------TCSGEVNPEVFSH 172 (314)
Q Consensus 133 -----------------l~~~~~~~~~~---~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 172 (314)
+++.++++++. ..+.++++........ +..+.+....+..
T Consensus 178 ~~~~~l~~~~~l~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~ 257 (394)
T PRK10213 178 NAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLV 257 (394)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCcccccchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHH
Confidence 11111111000 1111111000000000 2345566667777
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccch
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTN 252 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 252 (314)
....+++.+++.++.+++.||.+++.............+++....++.+......++.+++.+...+...+.+.+..| +
T Consensus 258 ~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~ 336 (394)
T PRK10213 258 LLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-D 336 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-c
Confidence 888888999999999999999654443443333333334444444555555666666777777777777778888887 4
Q ss_pred hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHH-HHHHHHHHHHH
Q psy10938 253 LRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLIL-ICTLAAMLLIA 298 (314)
Q Consensus 253 ~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~-~~~~~~~~~~~ 298 (314)
.+++..+......++|..+||.+.|.+.|..+... +...+.+.++.
T Consensus 337 ~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 337 QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 45677788888888999999999999999887444 44444343333
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=99.92 E-value=6.2e-23 Score=180.24 Aligned_cols=261 Identities=20% Similarity=0.346 Sum_probs=197.3
Q ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHH
Q psy10938 19 AAGYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIG 98 (314)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 98 (314)
+.+.++++++.+....+..+..+++....++..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 87 (398)
T TIGR00895 8 KQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLW 87 (398)
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH
Confidence 33345566777777777888888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C--------------------------------
Q psy10938 99 ALLVDGLCGIASSVAQYYGVFLALRFINGFASR--------------P-------------------------------- 132 (314)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P-------------------------------- 132 (314)
+..+..++.++..++++++.+++.|++.|++.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 88 SILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999987 1
Q ss_pred ------------------------CCCCCc---cc-chhhhh----------------hhcCCcCCC-------------
Q psy10938 133 ------------------------LIPGHP---GK-VASVCD----------------VSALQPADN------------- 155 (314)
Q Consensus 133 ------------------------l~~~~~---~~-~~~~~~----------------~~~~~~~~~------------- 155 (314)
+++..+ ++ .++..+ ..+.+....
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcch
Confidence 111100 00 000000 000000000
Q ss_pred cCcc--------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHH
Q psy10938 156 STVA--------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSG 209 (314)
Q Consensus 156 ~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 209 (314)
.... ...+.+....+.......++.+++.++.+++.||+++|+...........
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 248 TARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVF 327 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 0000 23355666777788888899999999999999999998544433333333
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHH
Q psy10938 210 VAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFL 279 (314)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l 279 (314)
..++.....+.+......++.+++.+...+..+++..|.+|++.|+++.|+.+....+|..++|.+.|.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 328 AVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333332445555666677788888888899999999999999999999999999999999999999875
No 37
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=1.3e-23 Score=184.19 Aligned_cols=265 Identities=18% Similarity=0.187 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHH
Q psy10938 37 YAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYY 116 (314)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (314)
+..+..+...++...|.+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+..+..++..+.++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45667888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccC--------------C--------------------------------------------------
Q psy10938 117 GVFLALRFINGFASR--------------P-------------------------------------------------- 132 (314)
Q Consensus 117 ~~l~~~r~l~G~~~~--------------P-------------------------------------------------- 132 (314)
+.+++.|++.|++.+ |
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 999999999999987 1
Q ss_pred ------CCCCCccc---chhhhhh-hc-------CCcC---CC-------cCcc--------------------------
Q psy10938 133 ------LIPGHPGK---VASVCDV-SA-------LQPA---DN-------STVA-------------------------- 159 (314)
Q Consensus 133 ------l~~~~~~~---~~~~~~~-~~-------~~~~---~~-------~~~~-------------------------- 159 (314)
++++++++ .++.++. .+ .++. +. +++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYL 242 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 01111100 0000000 00 0000 00 0000
Q ss_pred -cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHH--HHHHHH--HHHHHHHHHHHH-h---cchhHHHHHHHHH
Q psy10938 160 -TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKW--FLVAGL--VLSSGVAMALYY-V---QTSTQNLILSCIF 230 (314)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~--~~~~~~~~~~~~-~---~~~~~~~~~~~~~ 230 (314)
+..+.+..+.+.......+..+++.++.+++.||++||+ ...... ....+....... . ++.+. .......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 321 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYA-ALALVAL 321 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHH-HHHHHHH
Confidence 234555667777888888899999999999999999985 111111 111111111111 1 12222 2222233
Q ss_pred HHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHH
Q psy10938 231 EALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFS 302 (314)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~ 302 (314)
+.+.....+...++..|.+|++.|+++.|+.+...++|+.++|.+.|.+.|..+ ...+.+.+++.+++.+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 322 GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 333333678888999999999999999999999999999999999999999876 344555555555555444
No 38
>KOG0252|consensus
Probab=99.91 E-value=3.3e-24 Score=180.75 Aligned_cols=293 Identities=19% Similarity=0.297 Sum_probs=212.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-c-------cccchhhHHhHhhHHHHHHhhhhhhhcccccchh
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDF-G-------MTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRK 93 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr 93 (314)
..+++...+.+...+.+.+.+|...++.+.|.+...+ | .++...+.+..+..+|..+||++.|++.||+|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 3667788888889999999999999999988876554 2 3445678899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHhhh-------HHHHHHHHHHHhhcccC---C-------------------------------
Q psy10938 94 ITLIGALLVDGLCGIASSVAQ-------YYGVFLALRFINGFASR---P------------------------------- 132 (314)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~---P------------------------------- 132 (314)
+++...++++.+++++++++. -..++...|++.|+|.| |
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 999999999999999887752 25678889999999999 3
Q ss_pred --------------------------------------------C-CCC-Ccccch-------h----hhhhhcCCcC--
Q psy10938 133 --------------------------------------------L-IPG-HPGKVA-------S----VCDVSALQPA-- 153 (314)
Q Consensus 133 --------------------------------------------l-~~~-~~~~~~-------~----~~~~~~~~~~-- 153 (314)
+ .+- .+|.+. + ..|..+....
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~ 274 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDI 274 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccccc
Confidence 0 000 000000 0 0000000000
Q ss_pred ------------CCcCcc---------------------------------------cccCCCCh---------hHHHHH
Q psy10938 154 ------------DNSTVA---------------------------------------TCSGEVNP---------EVFSHT 173 (314)
Q Consensus 154 ------------~~~~~~---------------------------------------~~~~~~~~---------~~~~~~ 173 (314)
...... ...+..+. .+-...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 275 EAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred chhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHH
Confidence 000000 11111111 111223
Q ss_pred HHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcch----hHHHH-HHHHHHHhhhhhchhheeeeccc
Q psy10938 174 LIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTS----TQNLI-LSCIFEALTGCCISVVYCIMVDL 248 (314)
Q Consensus 174 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
.+...+.++|..+...++|++|||+....++.++.+..+.+....+. ....+ ..+...++..+-......+.+|.
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~ 434 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEI 434 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhh
Confidence 34445566678888899999999999999999999988888766541 11222 22233344556667778899999
Q ss_pred ccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh-----hhh-HHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q psy10938 249 FPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID-----GHC-LILICTLAAMLLIAGVFSMFLPATGKKELD 314 (314)
Q Consensus 249 ~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 314 (314)
+|++.|++..|+....+..|++++....+++.+ ..+ ...+++++.+.+++.+..+++||+++|++|
T Consensus 435 FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 435 FPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLE 506 (538)
T ss_pred chHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHH
Confidence 999999999999999999999999999999999 444 678899999999998888888999998764
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.91 E-value=1.5e-23 Score=185.55 Aligned_cols=277 Identities=14% Similarity=0.057 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh----
Q psy10938 37 YAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV---- 112 (314)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---- 112 (314)
.++..+......+.+|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+....
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 4445555566677888888999999999999999999999999999999999999999998888877776655432
Q ss_pred -hhHHHHHHHHHHHhhcccC--------------C---------------------------------------------
Q psy10938 113 -AQYYGVFLALRFINGFASR--------------P--------------------------------------------- 132 (314)
Q Consensus 113 -~~~~~~l~~~r~l~G~~~~--------------P--------------------------------------------- 132 (314)
.++++.+++.|++.|++.+ |
T Consensus 106 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~ 185 (417)
T PRK10489 106 PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAG 185 (417)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 5678899999999998766 1
Q ss_pred ----------CCCCCccc---chhhhhh---hcC-CcCCCcCcc----------------------cccCCCChhHHHHH
Q psy10938 133 ----------LIPGHPGK---VASVCDV---SAL-QPADNSTVA----------------------TCSGEVNPEVFSHT 173 (314)
Q Consensus 133 ----------l~~~~~~~---~~~~~~~---~~~-~~~~~~~~~----------------------~~~~~~~~~~~~~~ 173 (314)
+++.++++ ++..++. .+. .+++..... +..+.+....+...
T Consensus 186 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~ 265 (417)
T PRK10489 186 TFITLLPLLRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLTMASAVRVLYPALADEVWQMGAAQIGLLY 265 (417)
T ss_pred HHHHHHHHHhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhHHHhhHHHHHhccCCChhHhHHHH
Confidence 12111111 0000110 000 000000000 22456667777888
Q ss_pred HHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchh
Q psy10938 174 LIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNL 253 (314)
Q Consensus 174 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 253 (314)
....++.+++.++.+++.||.++++.+..+..+..+..+.+.+.++.+......++.+++.+...+...++..|..|++.
T Consensus 266 ~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 345 (417)
T PRK10489 266 AAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM 345 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH
Confidence 88889999999999999999877777777777777776666655555555555566666666666777788999999999
Q ss_pred hHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHH-HHHhcccCCCCCC
Q psy10938 254 RVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGV-FSMFLPATGKKEL 313 (314)
Q Consensus 254 r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 313 (314)
|+++.|+.+...++|..++|.+.|.+.|..+ ...+...+.+.++..+ .....+++|++++
T Consensus 346 ~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (417)
T PRK10489 346 LGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQ 407 (417)
T ss_pred HHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999999999999999999999999999877 4555555555444444 4445577666543
No 40
>KOG0569|consensus
Probab=99.91 E-value=8.9e-23 Score=178.02 Aligned_cols=284 Identities=20% Similarity=0.234 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc--------ccccc--cccc----hhhHHhHhhHHHHHHhhhhhhhcccccchhHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSA--------QCDFG--MTSS----DKGWLNAAPMLGMVFGSYFWGCLADTQGRKIT 95 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~s~~----~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~ 95 (314)
.....++.+-.++....+++..+.+ .+.+| .+++ .++.+.+++.+|.++|++..|+++||+|||..
T Consensus 13 ~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~ 92 (485)
T KOG0569|consen 13 VIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNA 92 (485)
T ss_pred HHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 3333444455555555554433322 23455 3333 35778999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHh---hhHHHHHHHHHHHhhcccC--------------C--------------------------
Q psy10938 96 LIGALLVDGLCGIASSV---AQYYGVFLALRFINGFASR--------------P-------------------------- 132 (314)
Q Consensus 96 l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~--------------P-------------------------- 132 (314)
+.++.++..++.+++.+ .++++++.++|++.|+..+ |
T Consensus 93 l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 93 LLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 99999988888877665 5889999999999999988 2
Q ss_pred ---------------------------------------C-CCCCcccc-----------------hhhhhhhcCC-cCC
Q psy10938 133 ---------------------------------------L-IPGHPGKV-----------------ASVCDVSALQ-PAD 154 (314)
Q Consensus 133 ---------------------------------------l-~~~~~~~~-----------------~~~~~~~~~~-~~~ 154 (314)
+ ++++.++. +...+..+.+ ..+
T Consensus 173 l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~ 252 (485)
T KOG0569|consen 173 LPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEK 252 (485)
T ss_pred cHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcccc
Confidence 0 01111100 0000000000 000
Q ss_pred CcCcc----------------------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh
Q psy10938 155 NSTVA----------------------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM 194 (314)
Q Consensus 155 ~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 194 (314)
..... ...+.+..++.......+....+.++++.++.||+
T Consensus 253 ~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~ 332 (485)
T KOG0569|consen 253 KKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL 332 (485)
T ss_pred ccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000 34567778888889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhc---c---hhHH---HHHHHHHHH-hhhhhchhheeeecccccchhhHHHHHHHHhh
Q psy10938 195 GAKWFLVAGLVLSSGVAMALYYVQ---T---STQN---LILSCIFEA-LTGCCISVVYCIMVDLFPTNLRVLAAALSSTF 264 (314)
Q Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 264 (314)
|||+.+..+..++.++.+++.... + .|.. +...+++.+ +..+..|+.+-+.+|++|++.|+.+.+.....
T Consensus 333 gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~ 412 (485)
T KOG0569|consen 333 GRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAV 412 (485)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHH
Confidence 999999999998888777764431 1 2222 222233333 34455678889999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hcccCCCCCC
Q psy10938 265 GRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSM-FLPATGKKEL 313 (314)
Q Consensus 265 ~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 313 (314)
.++...+.......+.+..|...|..+.+.+.+..+..+ ++||||+|+.
T Consensus 413 ~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 413 NWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 999999999999999999998888888888777777655 5699999863
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=1.3e-22 Score=178.99 Aligned_cols=267 Identities=13% Similarity=0.003 Sum_probs=192.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
+..+.....+.+..+.+.++...+.+.+|.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+..+.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34455666667777788888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhhhHHHHHHHHHHHhhcccC--------------C-------------------------------------
Q psy10938 104 GLCGIASSVAQYYGVFLALRFINGFASR--------------P------------------------------------- 132 (314)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------- 132 (314)
.++.+...++++++.+++.|+++|++.+ |
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 9999999999999999999999999877 1
Q ss_pred -------------------CCCCCcccch--hhhh-------hhcCCcCCCcC-----------------cc---cccCC
Q psy10938 133 -------------------LIPGHPGKVA--SVCD-------VSALQPADNST-----------------VA---TCSGE 164 (314)
Q Consensus 133 -------------------l~~~~~~~~~--~~~~-------~~~~~~~~~~~-----------------~~---~~~~~ 164 (314)
++++++++++ +..+ ..++++..... +. +..+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~ 248 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQL 248 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Confidence 1111111100 0011 11111000000 00 22344
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-----chhHHHHHHHHHHHhhhhhch
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-----TSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (314)
+..+.+.......++..++.++.+++.||+++|+....+..+..++..++...+ +.+......++.+++.+...+
T Consensus 249 ~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 328 (406)
T PRK15402 249 SSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANA 328 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhh
Confidence 555556655666677888999999999999999988888777666665554322 223334445556666666665
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHH
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTL 291 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~ 291 (314)
..+...... ++++++++.+..+....++..+++.+.+.+.+..+...+...
T Consensus 329 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 379 (406)
T PRK15402 329 GLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLF 379 (406)
T ss_pred hHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 555444333 458899999999999999999999999999998775444333
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=1.5e-22 Score=176.59 Aligned_cols=270 Identities=16% Similarity=0.104 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHhhccc-cccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHH-HHHHHHHHHhHHHHhh
Q psy10938 36 LYAYAAISITVLSFVLPS-AQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLI-GALLVDGLCGIASSVA 113 (314)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~ 113 (314)
.++..++......|.+|. +++++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++ .+..+..++.++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 355666666777787776 57889999999999999999999999999999999999988765 4566666777888899
Q ss_pred hHHHHHHHHHHHhhcccC---C----------------------------------------------------------
Q psy10938 114 QYYGVFLALRFINGFASR---P---------------------------------------------------------- 132 (314)
Q Consensus 114 ~~~~~l~~~r~l~G~~~~---P---------------------------------------------------------- 132 (314)
+|++.+++.|++.|.+.+ |
T Consensus 85 ~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~ 164 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALA 164 (375)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHH
Confidence 999999999998887655 1
Q ss_pred -----------CCCCCcccchh-----hhhhhcCCcCCCcCcc--------------------cccCCCChhHHHHHHHH
Q psy10938 133 -----------LIPGHPGKVAS-----VCDVSALQPADNSTVA--------------------TCSGEVNPEVFSHTLII 176 (314)
Q Consensus 133 -----------l~~~~~~~~~~-----~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 176 (314)
+++.+++++++ ..+..++++.+..... +..+.+..+.+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 244 (375)
T TIGR00899 165 FVLCGVLVWLFLPSYPRGAPGALTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTA 244 (375)
T ss_pred HHHHHHHHHHhCCCcccCcccccCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHH
Confidence 11111111000 0000000000000000 22345555566655566
Q ss_pred HhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHH
Q psy10938 177 GLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVL 256 (314)
Q Consensus 177 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 256 (314)
.....++.++.+++.||+|||+.+..+.....+......+.++.+.......+.+++.+...+....+..|..|++ +++
T Consensus 245 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~ 323 (375)
T TIGR00899 245 AGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGA 323 (375)
T ss_pred HHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhH
Confidence 6667778889999999999999888777666655555555555555555555566667777777778888988764 579
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhcc
Q psy10938 257 AAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLP 306 (314)
Q Consensus 257 ~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 306 (314)
+.++.+...++|..++|.+.|.+.|..+ ...+++.+++.+++.+...+++
T Consensus 324 ~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 324 ATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999877 5556666666666666555443
No 43
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=2.7e-22 Score=180.40 Aligned_cols=256 Identities=14% Similarity=0.097 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhH
Q psy10938 29 LVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGI 108 (314)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 108 (314)
.++.++.+.+...++...+.+..|.+.+|+|.|+.+.+++.+.+.++..++++++|+++||+|||++++.+..+..++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45566677788888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhhcccC--------------C------------------------------------------
Q psy10938 109 ASSVAQYYGVFLALRFINGFASR--------------P------------------------------------------ 132 (314)
Q Consensus 109 ~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------------ 132 (314)
.+.++++++.+++.|+++|++.+ |
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 99999999999999999999988 1
Q ss_pred --------------CCCCCccc-chhhh-----------------hh---------------------------hcCCcC
Q psy10938 133 --------------LIPGHPGK-VASVC-----------------DV---------------------------SALQPA 153 (314)
Q Consensus 133 --------------l~~~~~~~-~~~~~-----------------~~---------------------------~~~~~~ 153 (314)
.++...++ +.... +. .+..++
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNR 250 (471)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 11111000 00000 00 000000
Q ss_pred CC------cCcc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHH
Q psy10938 154 DN------STVA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFL 200 (314)
Q Consensus 154 ~~------~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 200 (314)
.. +++. ...+.+....++......++..++..+.+++.||+|+|+.+
T Consensus 251 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~ 330 (471)
T PRK10504 251 ALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL 330 (471)
T ss_pred CccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 00 0000 23456666777777777777888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc-ch--hHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHH
Q psy10938 201 VAGLVLSSGVAMALYYVQ-TS--TQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFG 277 (314)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g 277 (314)
..+..+..+...++.+.+ .. +......++.+++.+...+..+....+.+|++.++++.|+.+....+|..++|.+.|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g 410 (471)
T PRK10504 331 VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAG 410 (471)
T ss_pred HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 888887777666555532 12 122233444556667777777888889999999999999999999999999999999
Q ss_pred HHHhhhh
Q psy10938 278 FLIDGHC 284 (314)
Q Consensus 278 ~l~~~~~ 284 (314)
.+.+..+
T Consensus 411 ~ll~~~g 417 (471)
T PRK10504 411 LLLGLFG 417 (471)
T ss_pred HHHHHhh
Confidence 9988765
No 44
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.91 E-value=3.1e-22 Score=168.10 Aligned_cols=283 Identities=19% Similarity=0.150 Sum_probs=223.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHH
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALL 101 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 101 (314)
.++.+++.+.+...........+.+++++.+.+.+|+|+|++|.+++.++..+..++..++.|.+.||||.|++...+.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 34556777888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHhhhHH---HHHHHHHHHhhcccC-------------C---------------------------------
Q psy10938 102 VDGLCGIASSVAQYY---GVFLALRFINGFASR-------------P--------------------------------- 132 (314)
Q Consensus 102 ~~~~~~~~~~~~~~~---~~l~~~r~l~G~~~~-------------P--------------------------------- 132 (314)
+..+-.+..+++.+. +++++.+.+.|++.+ |
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHh
Confidence 999999999988554 499999999999988 2
Q ss_pred ------------------------CCCCCcccchhhhhhh--------cCCcCCCcCcc--------------------c
Q psy10938 133 ------------------------LIPGHPGKVASVCDVS--------ALQPADNSTVA--------------------T 160 (314)
Q Consensus 133 ------------------------l~~~~~~~~~~~~~~~--------~~~~~~~~~~~--------------------~ 160 (314)
..++.++.+...++.. ++++....... .
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~ 247 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVT 247 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0122222211111111 11111000000 4
Q ss_pred ccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-------chhHHHHHHHHHHHh
Q psy10938 161 CSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-------TSTQNLILSCIFEAL 233 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 233 (314)
+.+.+..+++.......+.+.+.+..+|+++||+|.+++....+..++++.......+ +........+....+
T Consensus 248 ~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~ 327 (417)
T COG2223 248 QFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVF 327 (417)
T ss_pred hcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHH
Confidence 5667788888888999999999999999999999999998888888888887776654 233444445556777
Q ss_pred hhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHhc
Q psy10938 234 TGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~ 305 (314)
.+......+..++.++|+ +.|.+.|+....+.+|+..-|...|...|..+ ...|+++..+.+++.+....+
T Consensus 328 ~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 328 AGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred hccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999975 56899999999999999999999999999987 456777777777777765544
No 45
>PRK10133 L-fucose transporter; Provisional
Probab=99.91 E-value=2.2e-22 Score=178.63 Aligned_cols=268 Identities=16% Similarity=0.147 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
+.....+..++..++..++++....+..|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+..++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 33455566666777888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHH---HhhhHHHHHHHHHHHhhcccC--------------C----------------------------CC-CCC
Q psy10938 104 GLCGIAS---SVAQYYGVFLALRFINGFASR--------------P----------------------------LI-PGH 137 (314)
Q Consensus 104 ~~~~~~~---~~~~~~~~l~~~r~l~G~~~~--------------P----------------------------l~-~~~ 137 (314)
.++.+++ .++++++.++++|+++|+|.+ | +. ...
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999875 468999999999999999988 1 00 000
Q ss_pred c------------ccc------------------hh----------hhhhhcCC--cCC---C-----------cCcc--
Q psy10938 138 P------------GKV------------------AS----------VCDVSALQ--PAD---N-----------STVA-- 159 (314)
Q Consensus 138 ~------------~~~------------------~~----------~~~~~~~~--~~~---~-----------~~~~-- 159 (314)
+ +.. .. ..+..+.+ +.. . +.+.
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 261 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWR 261 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHH
Confidence 0 000 00 00000000 000 0 0010
Q ss_pred --------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy10938 160 --------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMA 213 (314)
Q Consensus 160 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 213 (314)
+..+.++...+.......++.++|++.++++.||+++|+++..+..+..+.+++
T Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 262 WAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 124667778888889999999999999999999999999988887777666666
Q ss_pred HHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHH
Q psy10938 214 LYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTL 291 (314)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~ 291 (314)
..+.++. .......+.+++.+..+|..++...|..|++ .+++.++.. ...+|+.++|.+.|.+.|..+ ...+++.
T Consensus 342 ~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~ 418 (438)
T PRK10133 342 SAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIP 418 (438)
T ss_pred HHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHH
Confidence 5555443 3345566788899999999999999988754 577788776 455789999999999999876 3445443
Q ss_pred HHH
Q psy10938 292 AAM 294 (314)
Q Consensus 292 ~~~ 294 (314)
...
T Consensus 419 ~~~ 421 (438)
T PRK10133 419 ALC 421 (438)
T ss_pred HHH
Confidence 333
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=7.6e-23 Score=177.57 Aligned_cols=251 Identities=16% Similarity=0.031 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
....++.........+.+|.+.++++.++.+.+++.+++.++..++++++|+++||+|||+++..+..+..++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777777888899999999999999999999999999999999999999999999999999999998888888
Q ss_pred h-----HHHHHHHHHHHhhcccC--------------C------------------------------------------
Q psy10938 114 Q-----YYGVFLALRFINGFASR--------------P------------------------------------------ 132 (314)
Q Consensus 114 ~-----~~~~l~~~r~l~G~~~~--------------P------------------------------------------ 132 (314)
+ +++.+++.|++.|++.+ |
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8 99999999999999888 1
Q ss_pred -------------CC--CCCcccchh-----hhhhhcC---CcCCCcCcc-------------------------cccCC
Q psy10938 133 -------------LI--PGHPGKVAS-----VCDVSAL---QPADNSTVA-------------------------TCSGE 164 (314)
Q Consensus 133 -------------l~--~~~~~~~~~-----~~~~~~~---~~~~~~~~~-------------------------~~~~~ 164 (314)
++ +++++++++ .++..+. ..+++.... +..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGR 244 (365)
T ss_pred HHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC
Confidence 11 111101110 0111000 000000000 12456
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhhhhhchhhee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQT-STQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
+..+.+.......++.+++.++.+++.||++||+....+..+.+++.....+.++ .+......++.+++.+...+...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 324 (365)
T TIGR00900 245 GSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGT 324 (365)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677788888888999999999999999999999888877777777777666654 555566667778888888888899
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
+..|..|+++|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 325 LLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999998753
No 47
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=3.7e-22 Score=174.74 Aligned_cols=254 Identities=19% Similarity=0.197 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
...+....+........+.+..|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+..+..++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 7 ALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 33334444556677778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhhcccC--------------C-------------------------------------------
Q psy10938 110 SSVAQYYGVFLALRFINGFASR--------------P------------------------------------------- 132 (314)
Q Consensus 110 ~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------------- 132 (314)
..++++++.+.+.|++.|++.+ |
T Consensus 87 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 166 (385)
T TIGR00710 87 LALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLS 166 (385)
T ss_pred HHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9999999999999999999988 1
Q ss_pred -------------CCCCCcccc-hhh----h---hhhcCCcCCCcCcc--------------------cccCCCChhHHH
Q psy10938 133 -------------LIPGHPGKV-ASV----C---DVSALQPADNSTVA--------------------TCSGEVNPEVFS 171 (314)
Q Consensus 133 -------------l~~~~~~~~-~~~----~---~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 171 (314)
+++.+++++ .+. + +..++++....... +..+.++.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 246 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL 246 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHH
Confidence 122111111 000 0 11111110000000 234566777778
Q ss_pred HHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc----ch-hHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 172 HTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ----TS-TQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
......++.+++.++.+++.||+++|+.+..+..+..++.+++.... +. ........+.+++.+...+.......
T Consensus 247 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 326 (385)
T TIGR00710 247 LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYAL 326 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888899999999999999999999988877766666655544322 12 22233344556667777777778888
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
|..| +.++++.++.+.....++.+.+.+.+.+.+..+
T Consensus 327 ~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 363 (385)
T TIGR00710 327 EDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTA 363 (385)
T ss_pred ccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccCh
Confidence 8876 578999999999988666666666665444333
No 48
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.90 E-value=6e-22 Score=174.92 Aligned_cols=276 Identities=13% Similarity=0.108 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHH-HhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccch-hHHHHHHHHHHHHHhHHHHh
Q psy10938 35 LLYAYAAISITVL-SFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGR-KITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~ 112 (314)
..++..+.....+ +++.+.+.+++|+|..|+|++.+++.++..++++++|.++||+|| |+++.++..+..++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555 556677778899999999999999999999999999999999965 77888888888888888888
Q ss_pred hhHHHHHHHHHHHhhcccCC------------------------------------------------------------
Q psy10938 113 AQYYGVFLALRFINGFASRP------------------------------------------------------------ 132 (314)
Q Consensus 113 ~~~~~~l~~~r~l~G~~~~P------------------------------------------------------------ 132 (314)
.++++.+++.|++.|++.+|
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~~~~~f~~~~~~ 168 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIELSNIQLYITAGS 168 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 89999999999888885431
Q ss_pred ----------CCCCC-cccc--hhhhhhh-----cCCcCCCcCcc----------------------cccCCC-------
Q psy10938 133 ----------LIPGH-PGKV--ASVCDVS-----ALQPADNSTVA----------------------TCSGEV------- 165 (314)
Q Consensus 133 ----------l~~~~-~~~~--~~~~~~~-----~~~~~~~~~~~----------------------~~~~~~------- 165 (314)
+++.+ ++++ ....+.. +..+.+..... ...+.+
T Consensus 169 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (418)
T TIGR00889 169 SALLGVFALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSF 248 (418)
T ss_pred HHHHHHHHhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchh
Confidence 11111 0000 0000000 00000000000 111211
Q ss_pred -ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc-h---hHHHHHHHHHHHhhhhhchh
Q psy10938 166 -NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQT-S---TQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 240 (314)
....+....+..+..+++.+..+++.||+|+|+.+..+.++..+...++....+ . +..+...++.+.+.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 244567777788888999999999999999999999999888887766655322 1 22334455566666677777
Q ss_pred heeeecccccchhhHHHHHHHH-hhhhhhhhhHHHHHHHHHhhhh-------HHHHHHHHHHHHHHHHHHH-hcccCCC
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSS-TFGRFGGLTGNLMFGFLIDGHC-------LILICTLAAMLLIAGVFSM-FLPATGK 310 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~-~~~~~g~~~~p~~~g~l~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~ 310 (314)
...++.|.+|++.|+++.|+.+ ....+|.+++|.+.|.+.|+.+ ...|...+++.+++.++.. +++|+++
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 7889999999999999999997 5677999999999999999853 2456666666666555544 4466544
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=6.8e-22 Score=174.12 Aligned_cols=255 Identities=13% Similarity=0.101 Sum_probs=174.3
Q ss_pred hhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHH---h-hhHHHHHHHHHH
Q psy10938 49 FVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASS---V-AQYYGVFLALRF 124 (314)
Q Consensus 49 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~ 124 (314)
+.+|.+.+|+|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++. . .++++.+++.|+
T Consensus 34 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (402)
T TIGR00897 34 GWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYG 113 (402)
T ss_pred HhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHH
Confidence 445566688999999999999999999999999999999999999999999999988876553 3 358888999999
Q ss_pred HhhcccC--------------C--------------------------------------------------------CC
Q psy10938 125 INGFASR--------------P--------------------------------------------------------LI 134 (314)
Q Consensus 125 l~G~~~~--------------P--------------------------------------------------------l~ 134 (314)
+.|++.+ | +.
T Consensus 114 i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 193 (402)
T TIGR00897 114 IRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSN 193 (402)
T ss_pred HHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999877 1 01
Q ss_pred CCC--cccc---hhhhhhhcCCcCCCcCcc--------------------------cccCCCChhHHHHHHHHHhhhhhH
Q psy10938 135 PGH--PGKV---ASVCDVSALQPADNSTVA--------------------------TCSGEVNPEVFSHTLIIGLACIPS 183 (314)
Q Consensus 135 ~~~--~~~~---~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 183 (314)
++. ++++ ++..+..+..+...+.+. +..+.+..+.+.......++..++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig 273 (402)
T TIGR00897 194 KDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVF 273 (402)
T ss_pred CCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHH
Confidence 111 1100 000000000000000000 234555666667777788899999
Q ss_pred HhHHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHH-----hcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHH
Q psy10938 184 SLAMPLLVHKMGAKWFLV-AGLVLSSGVAMALYY-----VQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLA 257 (314)
Q Consensus 184 ~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 257 (314)
.+..|+++||++||+... .+.....+..+.+.. .++.+......++.+++.+...+ ......|.. +++|+++
T Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~ 351 (402)
T TIGR00897 274 NVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAA 351 (402)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHH
Confidence 999999999999887653 233333333222222 12333444455555655555444 334556654 4689999
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 258 AALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 258 ~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
.|+.+...++++.++|++.|.+.|..| ...+++.+++.+++.+...++
T Consensus 352 ~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 352 MSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999887 666777777777776666554
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=8.9e-22 Score=177.66 Aligned_cols=254 Identities=19% Similarity=0.222 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhH
Q psy10938 29 LVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGI 108 (314)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 108 (314)
.+..++++.+...++....++..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+..+..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45566678888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhhcccC--------------C------------------------------------------
Q psy10938 109 ASSVAQYYGVFLALRFINGFASR--------------P------------------------------------------ 132 (314)
Q Consensus 109 ~~~~~~~~~~l~~~r~l~G~~~~--------------P------------------------------------------ 132 (314)
++++++|++.+++.|+++|++.+ |
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~ 162 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN 162 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhh
Confidence 99999999999999999999988 1
Q ss_pred --------------CCCCCcccchhhh-------------------------------------------------hhhc
Q psy10938 133 --------------LIPGHPGKVASVC-------------------------------------------------DVSA 149 (314)
Q Consensus 133 --------------l~~~~~~~~~~~~-------------------------------------------------~~~~ 149 (314)
++++++++.++.. +..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (485)
T TIGR00711 163 VPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTD 242 (485)
T ss_pred hHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111111100000 0000
Q ss_pred CCcCCC----cCcc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHH
Q psy10938 150 LQPADN----STVA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKW 198 (314)
Q Consensus 150 ~~~~~~----~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 198 (314)
.++... +.+. ...+.+..+.+.......++..++.++.|++.||+|||+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 322 (485)
T TIGR00711 243 DNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK 322 (485)
T ss_pred CCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH
Confidence 000000 0000 234667778888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh--c--chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHH
Q psy10938 199 FLVAGLVLSSGVAMALYYV--Q--TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNL 274 (314)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~ 274 (314)
.+..+..+.+++...+.+. + +.+.......+.+++.+...+.......+..|+++++++.|+.+....+|+.+++.
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 402 (485)
T TIGR00711 323 LVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTA 402 (485)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 9888888777777766521 2 22334444556677777777666677778889999999999999999999999999
Q ss_pred HHHHHHhh
Q psy10938 275 MFGFLIDG 282 (314)
Q Consensus 275 ~~g~l~~~ 282 (314)
+.|.+.++
T Consensus 403 i~g~~~~~ 410 (485)
T TIGR00711 403 LITTILTN 410 (485)
T ss_pred HHHHHHHH
Confidence 99999875
No 51
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.89 E-value=3.5e-21 Score=172.84 Aligned_cols=283 Identities=16% Similarity=0.138 Sum_probs=195.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc----------------------ccccccchhhHHhHhhHHHHHHh
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQC----------------------DFGMTSSDKGWLNAAPMLGMVFG 79 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~g~~~s~~~~~~~i~ 79 (314)
..+.|+.+..+++.++.+++.++..++...+.+.+ |++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 45677888888899999999999999999888876 88999999999999999999999
Q ss_pred hhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh--hHHHHHHHHHHHhhcccC--------------C-----------
Q psy10938 80 SYFWGCLADTQGRKITLIGALLVDGLCGIASSVA--QYYGVFLALRFINGFASR--------------P----------- 132 (314)
Q Consensus 80 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~--------------P----------- 132 (314)
+++.|+++||+|||+++..+.++.+++.+++.++ .+++.+++.|+++|++.+ |
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999998887554 568889999999999988 1
Q ss_pred ---------------------------------------------CCCCCcccc----hhhhh----hhcCCc--CCC-c
Q psy10938 133 ---------------------------------------------LIPGHPGKV----ASVCD----VSALQP--ADN-S 156 (314)
Q Consensus 133 ---------------------------------------------l~~~~~~~~----~~~~~----~~~~~~--~~~-~ 156 (314)
+.+++|+++ ++..+ ..+.++ .+. .
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSL 252 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCC
Confidence 011111111 11110 001000 000 0
Q ss_pred Cc-------c---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHH---
Q psy10938 157 TV-------A---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWF--- 199 (314)
Q Consensus 157 ~~-------~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--- 199 (314)
.. . +..+.+....+....+..++..++.++.|+++||+++|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~ 332 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSL 332 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 00 0 3346677778888888899999999999999999865421
Q ss_pred -----HHHHHHHH--HHHHHHHHHhc-chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhh
Q psy10938 200 -----LVAGLVLS--SGVAMALYYVQ-TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLT 271 (314)
Q Consensus 200 -----~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~ 271 (314)
+....... .+......... +....+....+.+++.+...+.......|..|+ .+|.+.|+.+..+.+++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i 411 (465)
T TIGR00894 333 TAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLI 411 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHH
Confidence 11111111 11111122212 222233333344444444455555566677764 8899999999999999999
Q ss_pred HHHHHHHHHhhh--h--HHHHHHHHHHHHHHHHHHHhc
Q psy10938 272 GNLMFGFLIDGH--C--LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 272 ~p~~~g~l~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 305 (314)
+|.+.|.+.|.. + ...+.+.++..+++.++....
T Consensus 412 ~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 412 ASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 999999988753 2 445666676777766655444
No 52
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=8e-22 Score=176.08 Aligned_cols=280 Identities=16% Similarity=0.150 Sum_probs=202.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHH
Q psy10938 21 GYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGAL 100 (314)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 100 (314)
+.+.++|.++..+++....+..+...++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 91 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 91 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH
Confidence 34567788887777777766666666788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHhhhHHHHHHH-HHHHhhcccC----C-------------------------------------------
Q psy10938 101 LVDGLCGIASSVAQYYGVFLA-LRFINGFASR----P------------------------------------------- 132 (314)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~----P------------------------------------------- 132 (314)
.+..++.++++++++++.+++ .|++.|++.+ |
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 92 LLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998875 5689999887 1
Q ss_pred ---------------------CCCCCc------ccc-h------hhhhh-----hcCCcC----C-CcCcc---------
Q psy10938 133 ---------------------LIPGHP------GKV-A------SVCDV-----SALQPA----D-NSTVA--------- 159 (314)
Q Consensus 133 ---------------------l~~~~~------~~~-~------~~~~~-----~~~~~~----~-~~~~~--------- 159 (314)
+.+..+ ++. + ...+. .+...+ + ...+.
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNV 251 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHH
Confidence 011100 000 0 00000 000000 0 00000
Q ss_pred -----------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh--hhHHHHH--HHHHHHHHHHHHHHHhc
Q psy10938 160 -----------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM--GAKWFLV--AGLVLSSGVAMALYYVQ 218 (314)
Q Consensus 160 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~--~~~~~~~~~~~~~~~~~ 218 (314)
...+.+..+.+...+..+++.++++++.+++.||. ++|+... .+....+++.++....+
T Consensus 252 l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~ 331 (455)
T TIGR00892 252 IMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG 331 (455)
T ss_pred HHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23456677778888888899999999999999973 3333222 22333334444444555
Q ss_pred chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHH
Q psy10938 219 TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLL 296 (314)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~ 296 (314)
+.+..+...++.+++.+...+...+...|.+|+++++++.|+.+...++|++++|.+.|.+.|..+ ...+++.+++.+
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 411 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHH
Confidence 666666667777877778888888899999999999999999999999999999999999999764 345555555544
Q ss_pred HHHH
Q psy10938 297 IAGV 300 (314)
Q Consensus 297 ~~~~ 300 (314)
++.+
T Consensus 412 i~~~ 415 (455)
T TIGR00892 412 SAGL 415 (455)
T ss_pred HHHH
Confidence 4443
No 53
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=2.6e-21 Score=169.24 Aligned_cols=267 Identities=13% Similarity=-0.018 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHH----HHHHHHHHHHhH
Q psy10938 33 GGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITL----IGALLVDGLCGI 108 (314)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~ 108 (314)
+...++..+.......|.+|.+.+|+|.|..++|++.+++.+...++++++|+++||+|||+.. ..+..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4455666677778888999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HHHhhhHHHHHHHHHHHhhcccC---C-----------------------------------------------------
Q psy10938 109 ASSVAQYYGVFLALRFINGFASR---P----------------------------------------------------- 132 (314)
Q Consensus 109 ~~~~~~~~~~l~~~r~l~G~~~~---P----------------------------------------------------- 132 (314)
....+++++.+++.|+++|.+.+ |
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 44467899999999998888766 1
Q ss_pred ----------CCCC-Ccccchh---------hhhhhcCCcCCCcCcc-------------------cccCCCChhHHHHH
Q psy10938 133 ----------LIPG-HPGKVAS---------VCDVSALQPADNSTVA-------------------TCSGEVNPEVFSHT 173 (314)
Q Consensus 133 ----------l~~~-~~~~~~~---------~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~ 173 (314)
+.++ +++++++ ..+..++++....... .+.+.+....+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~ 246 (382)
T TIGR00902 167 GLAFMLIGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLW 246 (382)
T ss_pred HHHHHHHHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHH
Confidence 1111 1111100 0001111000000000 34667777888888
Q ss_pred HHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchh
Q psy10938 174 LIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNL 253 (314)
Q Consensus 174 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 253 (314)
....+.++++....+++.||+|+|+.+..+.+...+......+.++.+..+....+.++..+...+....++.+. |+++
T Consensus 247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~ 325 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE 325 (382)
T ss_pred HHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh
Confidence 888899999999999999999999999999999999998888888888888888888888888899888899988 9999
Q ss_pred hHHHHHHHHh-hhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q psy10938 254 RVLAAALSST-FGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFS 302 (314)
Q Consensus 254 r~~~~g~~~~-~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 302 (314)
|++++++++. ...+|..++|.+.|.+.|+.+...++..+.+.+++.++.
T Consensus 326 ~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 326 IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 9999999875 456999999999999999988777777777776654443
No 54
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.89 E-value=6.5e-22 Score=172.55 Aligned_cols=251 Identities=16% Similarity=0.165 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh
Q psy10938 35 LLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ 114 (314)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 114 (314)
++++..+.++..+++..|.+.+++|+|+.+.|++.+++.++..+++++.|+++||+|||+++..+..+..++.++..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 35667788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccC---C-----------------------------------------------------------
Q psy10938 115 YYGVFLALRFINGFASR---P----------------------------------------------------------- 132 (314)
Q Consensus 115 ~~~~l~~~r~l~G~~~~---P----------------------------------------------------------- 132 (314)
+++.+++.|++.|++.+ |
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 99999999999999887 1
Q ss_pred ---------CCCCCccc-----chhhhhh-----hcCCcC-CC---------cCcc------------------------
Q psy10938 133 ---------LIPGHPGK-----VASVCDV-----SALQPA-DN---------STVA------------------------ 159 (314)
Q Consensus 133 ---------l~~~~~~~-----~~~~~~~-----~~~~~~-~~---------~~~~------------------------ 159 (314)
++++++++ ++...+. .+.+++ .. +.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPL 241 (379)
T ss_pred HHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01110000 0000000 000000 00 0000
Q ss_pred ---cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhh-HH-HHHHHH-HHHHHHHHHHHHh--cchhHHHHHHHHHH
Q psy10938 160 ---TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGA-KW-FLVAGL-VLSSGVAMALYYV--QTSTQNLILSCIFE 231 (314)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~-~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (314)
+..+.+..+.+.......++.+++.++.+++.||..+ |+ ...... ....++....... .+........+..+
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 321 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALG 321 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 2345566777888888889999999999999998643 32 222221 2222222222221 12223333344445
Q ss_pred HhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH
Q psy10938 232 ALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL 285 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~ 285 (314)
.+.....+....+..|.+|++.|+++.|+.+...++|+.++|.+.|.+.|+.++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 322 FLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred HHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 444455555567889999999999999999999999999999999999998763
No 55
>PRK10054 putative transporter; Provisional
Probab=99.89 E-value=1.2e-21 Score=171.92 Aligned_cols=262 Identities=11% Similarity=0.029 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHhhcc-ccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 35 LLYAYAAISITVLSFVLP-SAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
...+..........+.+| .+.+++|+|..++|++.+.+.++..+++++.|+++||+|||+++..+..+..++.++..++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 444555566666666555 5567899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcccC--------------C-----------------------------------------------
Q psy10938 114 QYYGVFLALRFINGFASR--------------P----------------------------------------------- 132 (314)
Q Consensus 114 ~~~~~l~~~r~l~G~~~~--------------P----------------------------------------------- 132 (314)
++++.+++.|++.|.+.+ |
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i 173 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAF 173 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 999999999988876654 1
Q ss_pred --------CCCCCcccchhhhhhhcCCcCC-CcCcc---------------------------cccCCCChhHHHHHHHH
Q psy10938 133 --------LIPGHPGKVASVCDVSALQPAD-NSTVA---------------------------TCSGEVNPEVFSHTLII 176 (314)
Q Consensus 133 --------l~~~~~~~~~~~~~~~~~~~~~-~~~~~---------------------------~~~~~~~~~~~~~~~~~ 176 (314)
+++++++++++..+..+.++.. ++... ...+.+....+......
T Consensus 174 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 253 (395)
T PRK10054 174 PLVFIQIWVQRSEKAIATETGSVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVN 253 (395)
T ss_pred HHHHHHHHHhccccccccchhhhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhh
Confidence 1222211111100101000000 00000 01112222334445555
Q ss_pred HhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhH
Q psy10938 177 GLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV-QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRV 255 (314)
Q Consensus 177 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~ 255 (314)
.+.........+++.||.++|+.+..+..+..+....+.+. ++.+.......+.+++.....|.....+.+..|++.|+
T Consensus 254 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~ 333 (395)
T PRK10054 254 AAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKA 333 (395)
T ss_pred hhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccce
Confidence 55556667788899999999998888887777777666554 33444455566677777777788888999999999999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHhhhhHH-HHHHHHHHHHH
Q psy10938 256 LAAALSSTFGRFGGLTGNLMFGFLIDGHCLI-LICTLAAMLLI 297 (314)
Q Consensus 256 ~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~-~~~~~~~~~~~ 297 (314)
++.+..+ ..++|..++|.+.|.+.|+.+.. .+++.+.+..+
T Consensus 334 ~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 334 SYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred ehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 9998765 66799999999999999998844 44444444333
No 56
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=1.9e-21 Score=173.20 Aligned_cols=284 Identities=12% Similarity=0.149 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHH
Q psy10938 25 FHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDG 104 (314)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 104 (314)
.++..+....+.+...+.++..+....|.+++ +|+|+++.+++.+++.++..+++++.|+++||+|||+.+..+..+.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 34566666667777777777777777888776 59999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHhh----hHHHHHHHHHHHhhcccC--------------C----------------------------------
Q psy10938 105 LCGIASSVA----QYYGVFLALRFINGFASR--------------P---------------------------------- 132 (314)
Q Consensus 105 ~~~~~~~~~----~~~~~l~~~r~l~G~~~~--------------P---------------------------------- 132 (314)
++.++..+. ++++.+.+.|++.|++.+ |
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 988887664 567788889999998776 1
Q ss_pred -----------------------CCCCCcc----cchhh-hhh----hcCCcCC-----------CcCcc----------
Q psy10938 133 -----------------------LIPGHPG----KVASV-CDV----SALQPAD-----------NSTVA---------- 159 (314)
Q Consensus 133 -----------------------l~~~~~~----~~~~~-~~~----~~~~~~~-----------~~~~~---------- 159 (314)
+++++++ +.++. .+. .+..+.+ .+.+.
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVF 262 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHH
Confidence 1111100 00000 000 0000000 00000
Q ss_pred -----------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHH---HHHHHHHHHhc-
Q psy10938 160 -----------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLS---SGVAMALYYVQ- 218 (314)
Q Consensus 160 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~---~~~~~~~~~~~- 218 (314)
+..+.+....+.......+..+++++++|++.||+++++....+.... .+....+...+
T Consensus 263 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T TIGR00712 263 VYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPA 342 (438)
T ss_pred HHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCC
Confidence 223556667777788888899999999999999996432111222111 11222222221
Q ss_pred -chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhh-hhHHHHHHHHHhhhh-HHHHHHHHHHH
Q psy10938 219 -TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGG-LTGNLMFGFLIDGHC-LILICTLAAML 295 (314)
Q Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~-~~~p~~~g~l~~~~~-~~~~~~~~~~~ 295 (314)
+.+......+..++..............|.+|++.|+++.|+.+...++|+ +++|.+.|.+.|+.+ ...+.+..++.
T Consensus 343 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~ 422 (438)
T TIGR00712 343 GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGS 422 (438)
T ss_pred CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHH
Confidence 222222222233322222222223456799999999999999999988875 689999999999877 45566666666
Q ss_pred HHHHHHHHhc-ccCC
Q psy10938 296 LIAGVFSMFL-PATG 309 (314)
Q Consensus 296 ~~~~~~~~~~-~~~~ 309 (314)
+++.+..+++ +|.|
T Consensus 423 ~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 423 ILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHhhcc
Confidence 6665555444 6654
No 57
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.5e-20 Score=165.15 Aligned_cols=270 Identities=14% Similarity=0.128 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHhhccc-cccccccccchhhHHhHhhHH-HHHHhhhhhhhcccccchhHHH-HHHHHHHHHHhHHHHh
Q psy10938 36 LYAYAAISITVLSFVLPS-AQCDFGMTSSDKGWLNAAPML-GMVFGSYFWGCLADTQGRKITL-IGALLVDGLCGIASSV 112 (314)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~ 112 (314)
..++.........|.+|. +.+|+|.|+++.|++.+...+ ++.++.++.++ +||+||||.+ ..+.+...++..+.++
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~ 101 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW 101 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 355555665556666655 578899999999999876655 66666665666 9999999875 5666666677778889
Q ss_pred hhHHHHHHHHH-HHhhcccC--C---------------------------------------------------------
Q psy10938 113 AQYYGVFLALR-FINGFASR--P--------------------------------------------------------- 132 (314)
Q Consensus 113 ~~~~~~l~~~r-~l~G~~~~--P--------------------------------------------------------- 132 (314)
+++++++++.+ ++.|.+.. |
T Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~ 181 (393)
T PRK15011 102 NRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAV 181 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHH
Confidence 99999876655 44444433 1
Q ss_pred ------------CCCCCcccchhhhhhhcCCcCCCcCcc------------------------cccCCCChhHHHHHHHH
Q psy10938 133 ------------LIPGHPGKVASVCDVSALQPADNSTVA------------------------TCSGEVNPEVFSHTLII 176 (314)
Q Consensus 133 ------------l~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~ 176 (314)
+++..++++....+....+++++.... +..+.+..+.+......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~ 261 (393)
T PRK15011 182 AFIVCGVMVWLFLPSMRKELPLATGTLEAPRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTA 261 (393)
T ss_pred HHHHHHHHHHhhcCccCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 121111111100000000000000000 22355555666666666
Q ss_pred HhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHH
Q psy10938 177 GLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVL 256 (314)
Q Consensus 177 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~ 256 (314)
.+..+++.++.|+++||++||+.+..+.....+.+......++.+......++.++..+...+....+..|..|+ .|++
T Consensus 262 ~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~ 340 (393)
T PRK15011 262 AGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGS 340 (393)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Ccch
Confidence 677788899999999999999887766655555444444444444444444444444444445555667888885 5899
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHhccc
Q psy10938 257 AAALSSTFGRFGGLTGNLMFGFLIDGHCL-ILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 257 ~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
+.++.+...++|..++|.+.|.+.|..++ ..+.+.+++.+++.+..+..||
T Consensus 341 ~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 341 ATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999998774 4555556666665555555554
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.88 E-value=1.2e-20 Score=165.94 Aligned_cols=258 Identities=15% Similarity=0.107 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGL 105 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 105 (314)
.++...+.........+....+.|.+|.+.+++|.|+.+.+++.+.+.+++.++++++|+++||+|||+++..+..+..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34445555555556667777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhcccC---C--------------------------------------------------
Q psy10938 106 CGIASSVAQYYGVFLALRFINGFASR---P-------------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~l~~~r~l~G~~~~---P-------------------------------------------------- 132 (314)
+.+...++++++.+++.|++.|++.+ |
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f 165 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACY 165 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 99999999999999999999999876 0
Q ss_pred -----------------CCCCCcccch--hhh----hhhcCCcCCCcCcc--------------------cccCCCChhH
Q psy10938 133 -----------------LIPGHPGKVA--SVC----DVSALQPADNSTVA--------------------TCSGEVNPEV 169 (314)
Q Consensus 133 -----------------l~~~~~~~~~--~~~----~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 169 (314)
++++++++++ +.. +..+++..+..... +..+.+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 245 (394)
T PRK11652 166 LFLLLLGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTV 245 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHH
Confidence 1221111111 111 11111110000000 2245556666
Q ss_pred HHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHH-HHHHHHHHHHHHh--cchhHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 170 FSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGL-VLSSGVAMALYYV--QTSTQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
+.......++.+++..+.+++.||++++....... ....+........ .+.+.......+.+++.+...+...++..
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 325 (394)
T PRK11652 246 SILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAM 325 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677777788888888888887443332222 2222222222221 23344455556667777778888888888
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
|..| ++++++.++.+....+|..+++.+.|.+.+...
T Consensus 326 ~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 362 (394)
T PRK11652 326 EPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQ 362 (394)
T ss_pred hhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 8887 578999999999999999999999998876543
No 59
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=1.3e-20 Score=166.00 Aligned_cols=247 Identities=19% Similarity=0.208 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHH
Q psy10938 37 YAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYY 116 (314)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (314)
.....+....+.|..|.+.+++|.|+++.+++.+++.+++.++++++|+++||+|||+++..+..+..++.+++.+++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 44455666777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccC--------------C--------------------------------------------------
Q psy10938 117 GVFLALRFINGFASR--------------P-------------------------------------------------- 132 (314)
Q Consensus 117 ~~l~~~r~l~G~~~~--------------P-------------------------------------------------- 132 (314)
+.+++.|+++|++.+ |
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 999999999999876 1
Q ss_pred -----CCCCCcccc-h----hhhhhhcCCcCCCcCcc-------------------cccCCCChhHHHHHHHHHhhhhhH
Q psy10938 133 -----LIPGHPGKV-A----SVCDVSALQPADNSTVA-------------------TCSGEVNPEVFSHTLIIGLACIPS 183 (314)
Q Consensus 133 -----l~~~~~~~~-~----~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 183 (314)
+.+++++++ + ...+..++++....... +..+.+..+.+.......++..+|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g 254 (401)
T PRK11043 175 LPTLRLKPSKKARKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVG 254 (401)
T ss_pred HHHHHcCCCCCccccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 111111111 1 11112221111000000 334566666776666677788889
Q ss_pred HhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HH--hcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHH
Q psy10938 184 SLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL---YY--VQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAA 258 (314)
Q Consensus 184 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~ 258 (314)
.+..+++.||+++|+..........++.+.+ .. .++.+.......+.+++.+..++.......|..| ++++++.
T Consensus 255 ~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 333 (401)
T PRK11043 255 GYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAA 333 (401)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHH
Confidence 9999999999998886655544444433322 22 1233333334455666777777877777777766 5789999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 259 ALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 259 g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
|+.+.....++..++.+.|.+.|...
T Consensus 334 g~~~~~~~~~~~~~~~~~g~l~~~~~ 359 (401)
T PRK11043 334 ALQNTLQLGLCFLASLLVSALISTPL 359 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCh
Confidence 99999999999999999999988643
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=1.2e-20 Score=165.83 Aligned_cols=245 Identities=18% Similarity=0.163 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh
Q psy10938 35 LLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ 114 (314)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 114 (314)
...+........+.+.+|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+..+..++.++...++
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~ 89 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE 89 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence 34445555555666889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccC--------------C------------------------------------------------
Q psy10938 115 YYGVFLALRFINGFASR--------------P------------------------------------------------ 132 (314)
Q Consensus 115 ~~~~l~~~r~l~G~~~~--------------P------------------------------------------------ 132 (314)
+++.+++.|+++|++.+ |
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i 169 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGIL 169 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHH
Confidence 99999999999999887 1
Q ss_pred --------CCCCCcccchh----h---hhhhcCCcCCCcCcc--------------------cccCCCChhHHHHHHHHH
Q psy10938 133 --------LIPGHPGKVAS----V---CDVSALQPADNSTVA--------------------TCSGEVNPEVFSHTLIIG 177 (314)
Q Consensus 133 --------l~~~~~~~~~~----~---~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~ 177 (314)
+++++++++++ . .+..++++....... ...+.+..+.+.......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 249 (392)
T PRK10473 170 VLLLSLFILKETRPARAPAASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTA 249 (392)
T ss_pred HHHHHHHHcCCCCCcccCCccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHH
Confidence 12211111000 0 011111000000000 223555566677777888
Q ss_pred hhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHH
Q psy10938 178 LACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLA 257 (314)
Q Consensus 178 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 257 (314)
+..+++.+..+++.||+|+|+.+..+..+..+..+.+.+.++.+.......+...+.+...+.. ...+..|.+.|+
T Consensus 250 ~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~-- 325 (392)
T PRK10473 250 GVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA-- 325 (392)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc--
Confidence 8899999999999999999999888888777777766665544433333333333333333332 223444544442
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 258 AALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 258 ~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
|.......++..+++.+.+.+.+..+
T Consensus 326 -g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 326 -GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44444555777777888888877766
No 61
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.87 E-value=2.3e-21 Score=167.47 Aligned_cols=240 Identities=23% Similarity=0.296 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHHHhhcc-ccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh
Q psy10938 34 GLLYAYAAISITVLSFVLP-SAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 112 (314)
++..+....+.....+..| .+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+..+..++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777788888888999 899999999999999999999999999999999999999999999999999999666667
Q ss_pred hhHHHHHHHHHHHhhcccC--------------C----------------------------------------------
Q psy10938 113 AQYYGVFLALRFINGFASR--------------P---------------------------------------------- 132 (314)
Q Consensus 113 ~~~~~~l~~~r~l~G~~~~--------------P---------------------------------------------- 132 (314)
++|++.+++.|++.|++.+ |
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 7888899999999999987 1
Q ss_pred ----------CCCCCcc--cchhhhh---hhcC-----CcCCCcC-c--c-----------------------cccCCC-
Q psy10938 133 ----------LIPGHPG--KVASVCD---VSAL-----QPADNST-V--A-----------------------TCSGEV- 165 (314)
Q Consensus 133 ----------l~~~~~~--~~~~~~~---~~~~-----~~~~~~~-~--~-----------------------~~~~~~- 165 (314)
+.+++++ ++++.++ ..+. +..++.. . . +..+.+
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSG 241 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCT
T ss_pred hhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCH
Confidence 0111100 0000000 0000 0000000 0 0 233455
Q ss_pred ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHHhhhhhchhhe
Q psy10938 166 NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ---TSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
..+.+.......+...++.++.+++.||+++|+..........+..+.+.... +........++.+++.+...+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 321 (352)
T PF07690_consen 242 PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILF 321 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777778888888999999999999999987777666666666555554433 334455566677888888899999
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHH
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGN 273 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p 273 (314)
.+..|..|+++++++.|+.+...++++.++|
T Consensus 322 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 322 SLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999987
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=1.1e-20 Score=167.41 Aligned_cols=270 Identities=14% Similarity=0.056 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHhhcccc-ccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHH---
Q psy10938 35 LLYAYAAISITVLSFVLPSA-QCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIAS--- 110 (314)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~--- 110 (314)
...+..........+..|.+ .+++|+|+.+.|++.+.+.++..++++++|+++||+|||++++.+..+..+.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444555665554 55599999999999999999999999999999999999999887666555443211
Q ss_pred Hhhh-----HHHHHHHHHHHhhcccC-----------------------------------C------------------
Q psy10938 111 SVAQ-----YYGVFLALRFINGFASR-----------------------------------P------------------ 132 (314)
Q Consensus 111 ~~~~-----~~~~l~~~r~l~G~~~~-----------------------------------P------------------ 132 (314)
..++ .+....+.++..|.+.. |
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~ 176 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLG 176 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHH
Confidence 1111 11112233333332221 1
Q ss_pred -------------CCCCCcccc-----h-------hhhhhhcCCcCCCcCcc-----------------------c---c
Q psy10938 133 -------------LIPGHPGKV-----A-------SVCDVSALQPADNSTVA-----------------------T---C 161 (314)
Q Consensus 133 -------------l~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~-----------------------~---~ 161 (314)
+.++++++. + +.++..+..+++..... + .
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
T PRK09528 177 SGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFAT 256 (420)
T ss_pred HHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111111110 0 00000000000000000 0 1
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhh
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.+.+....+...++..+...++.++.|++.||+|+|+.+..+..+..+..++..+.++.+.......+.+...+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233445666777778888999999999999999999888888888887777777777666555566666665666666
Q ss_pred eeeecccccchhhHHHHHH-HHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 242 YCIMVDLFPTNLRVLAAAL-SSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~-~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
..+..|.+|++.+++..+. .+....+|.+++|.+.|.+.|..| ...+...+++.++..++..+
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999888766 567788999999999999999887 55666666666555554443
No 63
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.87 E-value=2.6e-20 Score=163.99 Aligned_cols=251 Identities=16% Similarity=0.134 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
+..++...+..++.....+++.|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+..+.+++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44556667777888888889999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHh---hhHHHHHHHHHHHhhcccC--------------C----------------------------C-CCC-Cc-c--
Q psy10938 110 SSV---AQYYGVFLALRFINGFASR--------------P----------------------------L-IPG-HP-G-- 139 (314)
Q Consensus 110 ~~~---~~~~~~l~~~r~l~G~~~~--------------P----------------------------l-~~~-~~-~-- 139 (314)
+.. .++++.+++.|++.|+|.+ | + ... .+ .
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 654 4689999999999999988 1 0 000 00 0
Q ss_pred ----------------cchhhhh-----------------hhcCCc-----CC-C-c---------Ccc-----------
Q psy10938 140 ----------------KVASVCD-----------------VSALQP-----AD-N-S---------TVA----------- 159 (314)
Q Consensus 140 ----------------~~~~~~~-----------------~~~~~~-----~~-~-~---------~~~----------- 159 (314)
+...++. ..+.++ .. . . ++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~y 244 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQFFY 244 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHHHH
Confidence 0000000 000000 00 0 0 000
Q ss_pred ---------------ccc--CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhH
Q psy10938 160 ---------------TCS--GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQ 222 (314)
Q Consensus 160 ---------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (314)
... +..................+|+++++++.||+++|+.+..+..++.+.+++..+.++..
T Consensus 245 vg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~- 323 (410)
T TIGR00885 245 VGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHV- 323 (410)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-
Confidence 111 11222233345555577889999999999999999999888888888888877766543
Q ss_pred HHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 223 NLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
......+.+++.+..+|..++...+..+++.+..+.++.... +|+.+.|++.|.+.|..
T Consensus 324 ~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 324 GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 355666777888899999999999999877655555555544 99999999999999964
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=2.6e-20 Score=163.39 Aligned_cols=265 Identities=12% Similarity=0.014 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh
Q psy10938 33 GGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 112 (314)
.+.+.++..+.........+.+.+|++.++.+.+++.+.+.+++.+.++++|+++||+|||++++.+..+..++.+.+.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 34555665554444455555667899999999999999999999999999999999999999999999999998888877
Q ss_pred hhHHHHHHHHHHHhhcccC---C---------------------------------------------------------
Q psy10938 113 AQYYGVFLALRFINGFASR---P--------------------------------------------------------- 132 (314)
Q Consensus 113 ~~~~~~l~~~r~l~G~~~~---P--------------------------------------------------------- 132 (314)
++++ ++.|+++|++.+ |
T Consensus 88 ~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~ 164 (393)
T PRK11195 88 GIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYL 164 (393)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765 678999999998 2
Q ss_pred --------CCCCCcccc---hh----hhhhhcC----CcCCCcCcc-----------------------cccCCCChhHH
Q psy10938 133 --------LIPGHPGKV---AS----VCDVSAL----QPADNSTVA-----------------------TCSGEVNPEVF 170 (314)
Q Consensus 133 --------l~~~~~~~~---~~----~~~~~~~----~~~~~~~~~-----------------------~~~~~~~~~~~ 170 (314)
+++.+++++ .+ ..+..+. .+++..... +..+.++.+.+
T Consensus 165 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G 244 (393)
T PRK11195 165 LAALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPA 244 (393)
T ss_pred HHHHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHH
Confidence 121111100 00 1111000 000000000 23466777888
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
.......++.+++.+..+++.||.++++.+..+.. .++....+.+.++.+......++.+++.+...+...+...|..|
T Consensus 245 ~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~ 323 (393)
T PRK11195 245 YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGH 323 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCc
Confidence 88888899999999999999999888877766643 33333344444444444455556677767666767777778766
Q ss_pred chh-hHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH
Q psy10938 251 TNL-RVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS 302 (314)
Q Consensus 251 ~~~-r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~ 302 (314)
++. +|++.++.+...+++..++..+.+.+ +..+ ...+.+.+...+++..+.
T Consensus 324 ~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 324 VLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred ccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 654 79999999999999999999999855 5555 444444444444444433
No 65
>KOG1330|consensus
Probab=99.86 E-value=6.1e-21 Score=161.72 Aligned_cols=260 Identities=18% Similarity=0.164 Sum_probs=183.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
+..++.+.++++..++++.|++.+..+.+.+++.+|++++..|++.+.+.+.+.+.+|++|+++|||.||+++.+|..++
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 34567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhhhHHHHHHHHHHHhhcccC---C------------------------------------------------
Q psy10938 104 GLCGIASSVAQYYGVFLALRFINGFASR---P------------------------------------------------ 132 (314)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~---P------------------------------------------------ 132 (314)
.++.++++++..+|+++++|.+.|+|.+ |
T Consensus 109 ~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr 188 (493)
T KOG1330|consen 109 TLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR 188 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceE
Confidence 9999999999999999999999999999 1
Q ss_pred ------------------CCCCCccc------ch----------hhhhhhcCCcCCCcCcc-------------------
Q psy10938 133 ------------------LIPGHPGK------VA----------SVCDVSALQPADNSTVA------------------- 159 (314)
Q Consensus 133 ------------------l~~~~~~~------~~----------~~~~~~~~~~~~~~~~~------------------- 159 (314)
+-.++|++ +. .++|.....+.+.....
T Consensus 189 ~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p 268 (493)
T KOG1330|consen 189 WAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAP 268 (493)
T ss_pred EEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhh
Confidence 01111111 00 01111111110000000
Q ss_pred -------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH----HHHH-------HHHHHHHHHHHHHHHhcc-h
Q psy10938 160 -------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK----WFLV-------AGLVLSSGVAMALYYVQT-S 220 (314)
Q Consensus 160 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~-------~~~~~~~~~~~~~~~~~~-~ 220 (314)
+..+...........+...++.+|.+++|.++||+.|+ .... .+..+++..+.+.....+ .
T Consensus 269 ~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s 348 (493)
T KOG1330|consen 269 AFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSS 348 (493)
T ss_pred hHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHH
Confidence 22233445666777888899999999999999995431 1111 111222222222222222 2
Q ss_pred hHHHHHHHHHH-HhhhhhchhheeeecccccchhhHHHHHHHHhhhh-hhhhhHHHHHHHHHhhh
Q psy10938 221 TQNLILSCIFE-ALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGR-FGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 221 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~g~~~~p~~~g~l~~~~ 283 (314)
.......++.+ ......+........|++|++.|.++.++...+.. .|.+-+|++.|.+.|+.
T Consensus 349 ~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 349 MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 22222222333 23444455556788999999999999999988876 77778888999999874
No 66
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=7.7e-21 Score=164.76 Aligned_cols=239 Identities=17% Similarity=0.120 Sum_probs=177.1
Q ss_pred HHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q psy10938 45 TVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRF 124 (314)
Q Consensus 45 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 124 (314)
...++++|.+++|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+..++.+.+ .+++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999888888877 7889999999999
Q ss_pred HhhcccC--------------C------------------------------------------------------CCCC
Q psy10938 125 INGFASR--------------P------------------------------------------------------LIPG 136 (314)
Q Consensus 125 l~G~~~~--------------P------------------------------------------------------l~~~ 136 (314)
+.|++.+ | +.+.
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 175 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWIPQV 175 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999887 1 0110
Q ss_pred CcccchhhhhhhcCCcCCCcCcc--------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHH
Q psy10938 137 HPGKVASVCDVSALQPADNSTVA--------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLL 190 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 190 (314)
+++++++..+......+..+++. ++.+.+..+.+...+...++.++++++.|++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l 255 (355)
T TIGR00896 176 RRRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPAL 255 (355)
T ss_pred ccccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 00000000000000000000000 3346667778888889999999999999999
Q ss_pred HHHh-hhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccc-cchhhHHHHHHHHhhhhhh
Q psy10938 191 VHKM-GAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLF-PTNLRVLAAALSSTFGRFG 268 (314)
Q Consensus 191 ~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~g 268 (314)
.||+ +||+.+..+..+..++.+.+.+.++..... ...+.+++.+..++...+...+.. +++.+++..++.+..++++
T Consensus 256 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 334 (355)
T TIGR00896 256 ARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLL 334 (355)
T ss_pred HhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9999 566666677777777666665554433322 345667777777777666665444 4567799999999999999
Q ss_pred hhhHHHHHHHHHhhhhH
Q psy10938 269 GLTGNLMFGFLIDGHCL 285 (314)
Q Consensus 269 ~~~~p~~~g~l~~~~~~ 285 (314)
..++|.+.|.+.|+.+.
T Consensus 335 ~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 335 AALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999998763
No 67
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=4.2e-20 Score=165.56 Aligned_cols=278 Identities=17% Similarity=0.119 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHh
Q psy10938 28 ILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCG 107 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 107 (314)
+.+..++.+.++..++..+.....+.+..+..-|+...+++..+..+...+.++++|.++||++|||+++.+..+..+..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 34444556666677777777777788888888889999999999999999999999999999999999999998877655
Q ss_pred HHHHhh-----hHHHHHHHHHHHhhcccC---C-----------------------------------------------
Q psy10938 108 IASSVA-----QYYGVFLALRFINGFASR---P----------------------------------------------- 132 (314)
Q Consensus 108 ~~~~~~-----~~~~~l~~~r~l~G~~~~---P----------------------------------------------- 132 (314)
+..++. .+++.+++.-++.|++.+ |
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~ 169 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 544432 478889999999999988 1
Q ss_pred -------------------CCCCCcccc---hh----hhhhhcCCcCCCcCcc------------------------ccc
Q psy10938 133 -------------------LIPGHPGKV---AS----VCDVSALQPADNSTVA------------------------TCS 162 (314)
Q Consensus 133 -------------------l~~~~~~~~---~~----~~~~~~~~~~~~~~~~------------------------~~~ 162 (314)
.+++.++++ ++ .++-++.....+.... +..
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l 249 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVL 249 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHh
Confidence 111111111 11 1111111000000000 344
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+......++..+..+++.++|.++.+++.+|+++++.+..+.+..+++.+.+.+.++.+......++.|++.........
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLN 329 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677778888999999999999999999999998888888888888888888888888878888888888888888888
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
+...+..|++.||++++++++....+..+|.++.|.+.|..+ ...+.+.++..+++.++....
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999988 555655565555555554443
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.85 E-value=6e-20 Score=160.44 Aligned_cols=235 Identities=21% Similarity=0.277 Sum_probs=163.5
Q ss_pred HHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q psy10938 42 ISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLA 121 (314)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (314)
+...++.|.+|.+.+++|+|+.+.+++.+++.++..++++++|+++||+|||+++..+..+..++.+.+.++++++.+++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccC--------------C-------------------------------------------------------
Q psy10938 122 LRFINGFASR--------------P------------------------------------------------------- 132 (314)
Q Consensus 122 ~r~l~G~~~~--------------P------------------------------------------------------- 132 (314)
.|++.|++.+ |
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 1
Q ss_pred -CCCCCcccch---hhhhhhc----CCcCCCcCcc-----------------------cccCCCChhHHHHHHHHHhhhh
Q psy10938 133 -LIPGHPGKVA---SVCDVSA----LQPADNSTVA-----------------------TCSGEVNPEVFSHTLIIGLACI 181 (314)
Q Consensus 133 -l~~~~~~~~~---~~~~~~~----~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~ 181 (314)
++++.+++++ +.++..+ ..+++..... +..+.+..+.+.......+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~ 244 (377)
T PRK11102 165 FIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLF 244 (377)
T ss_pred hCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 1221111110 0000000 0000000000 2345667778888888889999
Q ss_pred hHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---Hhc-chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHH
Q psy10938 182 PSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY---YVQ-TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLA 257 (314)
Q Consensus 182 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 257 (314)
++.++.+++.||+|+|+.+..+..+..+..+... ..+ +.+.......+.....+...+.......|..| +.++++
T Consensus 245 ~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 323 (377)
T PRK11102 245 VMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTA 323 (377)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHH
Confidence 9999999999999999988877765443332222 222 22222222333333344444445556677766 788999
Q ss_pred HHHHHhhhh-hhhhhHHHHHH
Q psy10938 258 AALSSTFGR-FGGLTGNLMFG 277 (314)
Q Consensus 258 ~g~~~~~~~-~g~~~~p~~~g 277 (314)
.++.+.... +|..+++++.+
T Consensus 324 ~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 324 SSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999887654 66667766654
No 69
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.85 E-value=7.3e-20 Score=160.96 Aligned_cols=266 Identities=15% Similarity=0.042 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHhhcc-ccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh
Q psy10938 36 LYAYAAISITVLSFVLP-SAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ 114 (314)
Q Consensus 36 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 114 (314)
..++.........+++| .+++++|+|..+.|++.+...+...+.+++.|+++||+|||+++..+..+..++.+.+.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~ 97 (400)
T PRK11646 18 DNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc
Confidence 33333444444455554 46788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccC---C-----------------------------------------------------------
Q psy10938 115 YYGVFLALRFINGFASR---P----------------------------------------------------------- 132 (314)
Q Consensus 115 ~~~~l~~~r~l~G~~~~---P----------------------------------------------------------- 132 (314)
+++++++.|+++|++.+ |
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~ 177 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLA 177 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999877 1
Q ss_pred -------CCCCCcc-cch----hhhhhhcCCcCCCcC-----------------cc--cccCCCChhHHHHHHHHHhhhh
Q psy10938 133 -------LIPGHPG-KVA----SVCDVSALQPADNST-----------------VA--TCSGEVNPEVFSHTLIIGLACI 181 (314)
Q Consensus 133 -------l~~~~~~-~~~----~~~~~~~~~~~~~~~-----------------~~--~~~~~~~~~~~~~~~~~~~~~~ 181 (314)
+++.+++ .++ ..++..++++..... +. ++.+..+.+.+.......+...
T Consensus 178 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~ 257 (400)
T PRK11646 178 AAFNAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSL 257 (400)
T ss_pred HHHHHHhCCcccccccchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHH
Confidence 1111110 000 111111111100000 00 2223344556666566555555
Q ss_pred hHHhHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHH
Q psy10938 182 PSSLAMPLLVH-KMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAAL 260 (314)
Q Consensus 182 ~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 260 (314)
.+....++..| |++.++.+..+..+.++...++.+.++.+.......+.+.+.+...|...+...|..|+++|+++.|+
T Consensus 258 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~ 337 (400)
T PRK11646 258 TLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGF 337 (400)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhH
Confidence 44444455554 56656666666666666666666666555544445556666667777888899999999999999999
Q ss_pred HHhhhhhhhhhHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHH
Q psy10938 261 SSTFGRFGGLTGNLMFGFLIDGHC-----LILICTLAAMLLIAGVF 301 (314)
Q Consensus 261 ~~~~~~~g~~~~p~~~g~l~~~~~-----~~~~~~~~~~~~~~~~~ 301 (314)
.+....+|..++|.+.|.+.|+.+ ...++..+.+.+++.+.
T Consensus 338 ~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 338 SRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999853 34444445555444443
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.85 E-value=3.1e-20 Score=162.77 Aligned_cols=245 Identities=18% Similarity=0.162 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHhhccccccccc--cccchhhHHhHh-----hHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHH
Q psy10938 38 AYAAISITVLSFVLPSAQCDFG--MTSSDKGWLNAA-----PMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIAS 110 (314)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~g~~~s~-----~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 110 (314)
+.+++++..+++..+.+.+++. .++++.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888877754 455666655443 334445789999999999999999999999999999999
Q ss_pred HhhhHHH--------HHHHHHHHhhcccC---C-----------------------------------------------
Q psy10938 111 SVAQYYG--------VFLALRFINGFASR---P----------------------------------------------- 132 (314)
Q Consensus 111 ~~~~~~~--------~l~~~r~l~G~~~~---P----------------------------------------------- 132 (314)
+++++++ .+++.|+++|++.+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9998875 48889999999877 1
Q ss_pred ---------------------------CCCCCcccchhhhhhhcCCcCC-----CcCc--c-------------------
Q psy10938 133 ---------------------------LIPGHPGKVASVCDVSALQPAD-----NSTV--A------------------- 159 (314)
Q Consensus 133 ---------------------------l~~~~~~~~~~~~~~~~~~~~~-----~~~~--~------------------- 159 (314)
++++++.+++ ++..+..+.. +... .
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKA--QEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITT 240 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHH--HhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000000 0000 0
Q ss_pred -------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHH-HHH-HHh--cchhHHHHHHH
Q psy10938 160 -------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVA-MAL-YYV--QTSTQNLILSC 228 (314)
Q Consensus 160 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~ 228 (314)
+..+.+..+.+.......+...++.++.+++.||+|||+.+.....+..+.. ... ... ++.+......+
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (394)
T TIGR00883 241 YLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVL 320 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 2334566677777788888999999999999999999987765554443322 222 222 23334444455
Q ss_pred HHHHhhhhhchhheeeecccccchhhHHHHHHHHhh-hhhhhhhHHHHHHHHHhhhh
Q psy10938 229 IFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTF-GRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~~g~~~~p~~~g~l~~~~~ 284 (314)
+.+++.+...+..++...|.+|++.|+++.++.... ..+|..++|.+.|.+.|+.+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 321 GLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 566667777888899999999999999999985444 55888899999999999877
No 71
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.84 E-value=4.4e-19 Score=155.27 Aligned_cols=262 Identities=12% Similarity=-0.046 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchh----HHHHHHHHHHHHHhHHHHh
Q psy10938 37 YAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRK----ITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~ 112 (314)
++..........|.+|.+.+|+|.|..++|++.+++.++..++++++|+++||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344445566778889999999999999999999999999999999999999999984 3333222222 2233444
Q ss_pred hhHHHHHHHHHHHhhcccC---C---------------------------------------------------------
Q psy10938 113 AQYYGVFLALRFINGFASR---P--------------------------------------------------------- 132 (314)
Q Consensus 113 ~~~~~~l~~~r~l~G~~~~---P--------------------------------------------------------- 132 (314)
+++++.+++.|++.|++.+ |
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~ 170 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVAS 170 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 6889999999999998766 1
Q ss_pred ------C-CCCCcccch---------hhhhhhcCCcCCCcCc-c------------------cccCCCChhHHHHHHHHH
Q psy10938 133 ------L-IPGHPGKVA---------SVCDVSALQPADNSTV-A------------------TCSGEVNPEVFSHTLIIG 177 (314)
Q Consensus 133 ------l-~~~~~~~~~---------~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~ 177 (314)
. ++.++++++ +..+..++++...... . .+.+.+..+.+.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~ 250 (382)
T PRK11128 171 MLLGQLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGV 250 (382)
T ss_pred HHHHHHccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHH
Confidence 0 111111100 0011111100000000 0 234556666777777777
Q ss_pred hhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHH
Q psy10938 178 LACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLA 257 (314)
Q Consensus 178 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 257 (314)
+..++...+.+++.||+++|+.+..+.+..++..+...+.++.+..+...++.+++.+...+....+..+. +++++++.
T Consensus 251 ~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 329 (382)
T PRK11128 251 VAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRL 329 (382)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHH
Confidence 88888999999999999999999888888888877777777777777777777877777777777887776 55667888
Q ss_pred HHHHHhh-hhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy10938 258 AALSSTF-GRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVF 301 (314)
Q Consensus 258 ~g~~~~~-~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 301 (314)
.+..+.. ..+|..++|.+.|.+.|..+...++..+++.+++.++
T Consensus 330 ~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 330 QALYSALAMGGSIAIMTVLSGFLYQHLGAGVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9988744 4577799999999999998876666666665554443
No 72
>KOG0254|consensus
Probab=99.84 E-value=2.9e-19 Score=162.01 Aligned_cols=286 Identities=20% Similarity=0.217 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHhhccccccccc-----ccc--chhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHH
Q psy10938 28 ILVIFGGLLYAYAAIS--ITVLSFVLPSAQCDFG-----MTS--SDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIG 98 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~s~--~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 98 (314)
..........+..+++ ....+++.+.+.++.. .+. .+.+++.+...++..++++++|+++|++|||+.++.
T Consensus 45 ~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~ 124 (513)
T KOG0254|consen 45 LLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLL 124 (513)
T ss_pred HHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3334444444555554 3344555555555321 122 345899999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC------C----------------------------------------
Q psy10938 99 ALLVDGLCGIASSVAQYYGVFLALRFINGFASR------P---------------------------------------- 132 (314)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~------P---------------------------------------- 132 (314)
+.+++.++.+++++++|+++++++|+++|+|.| |
T Consensus 125 ~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~ 204 (513)
T KOG0254|consen 125 AVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV 204 (513)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999999999999999999999 1
Q ss_pred -----------------------------------------------CCCCCccc-chhhhhhh----cCC---cCC---
Q psy10938 133 -----------------------------------------------LIPGHPGK-VASVCDVS----ALQ---PAD--- 154 (314)
Q Consensus 133 -----------------------------------------------l~~~~~~~-~~~~~~~~----~~~---~~~--- 154 (314)
+...++++ .....+.. ... ..+
T Consensus 205 ~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (513)
T KOG0254|consen 205 YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASW 284 (513)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccH
Confidence 00000000 00000000 000 000
Q ss_pred -----C-cCcc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHH
Q psy10938 155 -----N-STVA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLV 201 (314)
Q Consensus 155 -----~-~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 201 (314)
+ ..+. +..+..... .....+.++..+++..++.++.||+|||+.+.
T Consensus 285 ~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 285 GELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLL 363 (513)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 0 0000 112222222 55667777888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcc------------hhHHHHH-HHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhh
Q psy10938 202 AGLVLSSGVAMALYYVQT------------STQNLIL-SCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFG 268 (314)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g 268 (314)
.+...+.++.+++..... .+..+.. .+....+..+..++.+.+..|.+|.+.|+++.++.....++.
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 999999988887654321 1112222 222333455556677789999999999999999999999988
Q ss_pred hhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHH--HHHhcccCCCCCCC
Q psy10938 269 GLTGNLMFGFLIDGHC-LILICTLAAMLLIAGV--FSMFLPATGKKELD 314 (314)
Q Consensus 269 ~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~ 314 (314)
+.+-......+.+..+ ...+..++..+.+... ...++||||++.++
T Consensus 444 ~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sle 492 (513)
T KOG0254|consen 444 NFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLE 492 (513)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHH
Confidence 8877777666666654 5556555555555555 33455999998753
No 73
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.84 E-value=8.2e-24 Score=189.18 Aligned_cols=279 Identities=25% Similarity=0.372 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHhhccccc--cccccc---------cchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHH
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQ--CDFGMT---------SSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLV 102 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s---------~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 102 (314)
.++.+..+++...++...+... .+++.+ +.+.++..+...+|..+|++++|.++||+|||+.+..+..+
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3445777888877766654443 222222 23468999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhhh---HHHHHHHHHHHhhcccC--------------C---------------------------------
Q psy10938 103 DGLCGIASSVAQ---YYGVFLALRFINGFASR--------------P--------------------------------- 132 (314)
Q Consensus 103 ~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~--------------P--------------------------------- 132 (314)
..++.++.++++ |++.+.++|++.|++.| |
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 99999999999999998 1
Q ss_pred --------------------------------C-CCCCcccc-h-------------hhhhhhcCCcCC-----------
Q psy10938 133 --------------------------------L-IPGHPGKV-A-------------SVCDVSALQPAD----------- 154 (314)
Q Consensus 133 --------------------------------l-~~~~~~~~-~-------------~~~~~~~~~~~~----------- 154 (314)
| .+++.++. + +..+..+..++.
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 0 00000000 0 000000000000
Q ss_pred Cc-C--cc---------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHH
Q psy10938 155 NS-T--VA---------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGL 204 (314)
Q Consensus 155 ~~-~--~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 204 (314)
+. + .. ...+.+.. ........+...++.+.+.++.||+|||+.+..+.
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~ 323 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL 323 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence 00 0 00 01111111 23344555667778888889999999999998888
Q ss_pred HHHHHHHHHHH--H--hcch-----hHHHHHHHHHHH-hhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHH
Q psy10938 205 VLSSGVAMALY--Y--VQTS-----TQNLILSCIFEA-LTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNL 274 (314)
Q Consensus 205 ~~~~~~~~~~~--~--~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~ 274 (314)
.+++++.+.+. . ..+. ...+....+... ...+..+..+.+..|.+|++.|+++.|+....++++++++|.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~ 403 (451)
T PF00083_consen 324 LLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPF 403 (451)
T ss_pred ccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88777776663 1 1121 112222222222 233455667789999999999999999999999999999999
Q ss_pred HHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccCCCCCCC
Q psy10938 275 MFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPATGKKELD 314 (314)
Q Consensus 275 ~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 314 (314)
+...+.+..+ ...+.++++++++..+.. .++|||++|+++
T Consensus 404 ~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ 445 (451)
T PF00083_consen 404 LFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLE 445 (451)
T ss_pred ccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHH
Confidence 9998888877 667777777766666654 456999998763
No 74
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.84 E-value=9.2e-20 Score=158.59 Aligned_cols=238 Identities=17% Similarity=0.140 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc-cccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 31 IFGGLLYAYAAISITVLSFVLPS-AQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
+..+...+........+.++.|. +++++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34556667777788888999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh-HHHHHHHHHHHhhcccC-------------C----------------------------C--------------
Q psy10938 110 SSVAQ-YYGVFLALRFINGFASR-------------P----------------------------L-------------- 133 (314)
Q Consensus 110 ~~~~~-~~~~l~~~r~l~G~~~~-------------P----------------------------l-------------- 133 (314)
+.+++ +++.+++.|+++|++.+ | +
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 163 (366)
T TIGR00886 84 AGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL 163 (366)
T ss_pred HHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999 99999999999999866 1 0
Q ss_pred ------------------------CCCCccc-chhhhhhhcC-C---------cCC--CcCcc-----------------
Q psy10938 134 ------------------------IPGHPGK-VASVCDVSAL-Q---------PAD--NSTVA----------------- 159 (314)
Q Consensus 134 ------------------------~~~~~~~-~~~~~~~~~~-~---------~~~--~~~~~----------------- 159 (314)
.++.+++ +++.+...+. . ... ...+.
T Consensus 164 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (366)
T TIGR00886 164 AWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLG 243 (366)
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHH
Confidence 0000000 0000000000 0 000 00000
Q ss_pred ----------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHH
Q psy10938 160 ----------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ----TSTQNLI 225 (314)
Q Consensus 160 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 225 (314)
+..+.+..+.+.......+..++++++.+++.||+|+|+....+......+..++.+.. +.+....
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (366)
T TIGR00886 244 VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIV 323 (366)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 23455667777778888888999999999999999998877766666555555444322 2223333
Q ss_pred HHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhh
Q psy10938 226 LSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGG 269 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~ 269 (314)
...+..++.+...+..+...++..| ++++++.|+.+..+++|+
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 324 LFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 3444555666667777888888887 689999999999988764
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.83 E-value=9.6e-19 Score=153.89 Aligned_cols=272 Identities=13% Similarity=0.054 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-ccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHH
Q psy10938 32 FGGLLYAYAAISITVLSFVLPSA-QCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIAS 110 (314)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 110 (314)
.+...+++.+.....+.|.+|.+ .+++|.|+.+.|++.+++.++..+++++.|+++||+|||+.++.+.....++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33444555556666666777665 55689999999999999999999999999999999999999988776665543322
Q ss_pred H---hh-----hHHHHHHHHHHHhhcccC---C-----------------------------------------------
Q psy10938 111 S---VA-----QYYGVFLALRFINGFASR---P----------------------------------------------- 132 (314)
Q Consensus 111 ~---~~-----~~~~~l~~~r~l~G~~~~---P----------------------------------------------- 132 (314)
. +. +.+..+.+.+++.|++.+ |
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f 165 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVF 165 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhccCchHHH
Confidence 1 11 223345666777777665 1
Q ss_pred ----------------CCCCCcccchh---------------hhhhhcCCcCCCcCc-c-------------------cc
Q psy10938 133 ----------------LIPGHPGKVAS---------------VCDVSALQPADNSTV-A-------------------TC 161 (314)
Q Consensus 133 ----------------l~~~~~~~~~~---------------~~~~~~~~~~~~~~~-~-------------------~~ 161 (314)
..++.+++++. ..+..++++...... . ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~ 245 (396)
T TIGR00882 166 WLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSF 245 (396)
T ss_pred HHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111000 000011100000000 0 01
Q ss_pred c---CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhc
Q psy10938 162 S---GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCI 238 (314)
Q Consensus 162 ~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
. +......+.......+...++....+++.||+|+|+.+..+..+.++...+....++.+......++.+.+.....
T Consensus 246 ~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 325 (396)
T TIGR00882 246 FATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLL 325 (396)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 1 2223345566667777888888999999999999999988888877777766666666665555555555544444
Q ss_pred hhheeeecccccchhhHHHHHH-HHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH
Q psy10938 239 SVVYCIMVDLFPTNLRVLAAAL-SSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 239 ~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
.....+..+..|++.+++..+. .+....+|+.++|.+.|.+.|..| ...+.+.+++.++..++..
T Consensus 326 ~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 326 VGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 4455567777888888887766 567888999999999999999877 5667777776666555443
No 76
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.83 E-value=6.8e-19 Score=155.41 Aligned_cols=264 Identities=13% Similarity=0.011 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
.+..+........+.|.+|.+.+++|.+..+.++..+++.+++.++++++|+++||+|||+++..+..++.++.+++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 44555677778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcccC--------------C-----------------------------------------------
Q psy10938 114 QYYGVFLALRFINGFASR--------------P----------------------------------------------- 132 (314)
Q Consensus 114 ~~~~~l~~~r~l~G~~~~--------------P----------------------------------------------- 132 (314)
+|++.++++|+++|++.+ |
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~ 181 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGL 181 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999877 1
Q ss_pred ---------CCCCCcccch--hh-------hhhhcCCcCCCcCcc--------------------cccCCCChhHHHHHH
Q psy10938 133 ---------LIPGHPGKVA--SV-------CDVSALQPADNSTVA--------------------TCSGEVNPEVFSHTL 174 (314)
Q Consensus 133 ---------l~~~~~~~~~--~~-------~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 174 (314)
+++.++++++ .. .+..+++........ +..+.+..+.++...
T Consensus 182 i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~ 261 (413)
T PRK15403 182 IAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQV 261 (413)
T ss_pred HHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHH
Confidence 1221111110 00 011111100000000 233556666666666
Q ss_pred HHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH----Hhcchh-HHHHHHHHHHHhhhhhchhheeeecccc
Q psy10938 175 IIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY----YVQTST-QNLILSCIFEALTGCCISVVYCIMVDLF 249 (314)
Q Consensus 175 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
....+..++..+.+.+.+|..+++.......+..++.+++. ..++.+ ..+...++.+++.+...+......-+.
T Consensus 262 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~- 340 (413)
T PRK15403 262 PVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS- 340 (413)
T ss_pred HHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-
Confidence 66667777777777665443333332222222222222211 122322 234455556666677766666322221
Q ss_pred cchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy10938 250 PTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIA 298 (314)
Q Consensus 250 p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~ 298 (314)
.+..+|++.++.+.....+...++...|++.+.....++...+.+..+.
T Consensus 341 ~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 341 NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVI 389 (413)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 1223699999999999999999999999988886666666555554443
No 77
>KOG0255|consensus
Probab=99.83 E-value=9.2e-19 Score=159.35 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=190.4
Q ss_pred cccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCC---
Q psy10938 56 CDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRP--- 132 (314)
Q Consensus 56 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~P--- 132 (314)
+.+..+.....+..+++++|..+|++++|+++||+|||++++.+.++..++.+..++++|++.+++.|++.|++.++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 44556777889999999999999999999999999999999999999999999999999999999999999999981
Q ss_pred --------------------------------------------------------------CC---------CCCcc-c
Q psy10938 133 --------------------------------------------------------------LI---------PGHPG-K 140 (314)
Q Consensus 133 --------------------------------------------------------------l~---------~~~~~-~ 140 (314)
+. +.+.+ .
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a 270 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEA 270 (521)
T ss_pred HhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHH
Confidence 00 00000 0
Q ss_pred chhhhhhh-------------------cCCcCCCcCc--c--------------------------------cccCCCCh
Q psy10938 141 VASVCDVS-------------------ALQPADNSTV--A--------------------------------TCSGEVNP 167 (314)
Q Consensus 141 ~~~~~~~~-------------------~~~~~~~~~~--~--------------------------------~~~~~~~~ 167 (314)
.+..++.. +..+.....+ . ......+.
T Consensus 271 ~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~ 350 (521)
T KOG0255|consen 271 IKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGG 350 (521)
T ss_pred HHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCc
Confidence 00000000 0000000000 0 11222344
Q ss_pred hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchh---HHHHHHHHHHHhhhhhchhheee
Q psy10938 168 EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTST---QNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+.+......+.....+....+...|+.|||.....+..+..++++...+..... .......+..++.+..+...+.+
T Consensus 351 ~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (521)
T KOG0255|consen 351 NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLY 430 (521)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666667888888889999999999999999999999999988876543 35555666667778888888999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-HhcccCCCCCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFS-MFLPATGKKEL 313 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 313 (314)
..|++|+..|..+.+..+....++++++|.+.-..........+..++....+.+.+. .++||++++.+
T Consensus 431 ~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 431 SAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 9999999999999999999999999999999854444222333333565655656555 67799998765
No 78
>KOG2504|consensus
Probab=99.82 E-value=1.1e-19 Score=162.25 Aligned_cols=286 Identities=20% Similarity=0.197 Sum_probs=229.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHH
Q psy10938 21 GYGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGAL 100 (314)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 100 (314)
+.+.+.|.+++..++......-....++.+.+.++++++.+..+++|+.++....+.+..|+.+.+.||||.|.+.++|.
T Consensus 39 PdGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~ 118 (509)
T KOG2504|consen 39 PDGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGG 118 (509)
T ss_pred CCCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHH
Confidence 35667788888887877776666677788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHhhhHHHHHHHHH-HHhhcccC----C-------------------------------------------
Q psy10938 101 LVDGLCGIASSVAQYYGVFLALR-FINGFASR----P------------------------------------------- 132 (314)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~~----P------------------------------------------- 132 (314)
++..++.++..+++++|++++.. ++.|+|.+ |
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 99999999999999999998876 89999999 2
Q ss_pred ---------------------CCC----C-------------------------Ccccchhhh--------hhhcCCcCC
Q psy10938 133 ---------------------LIP----G-------------------------HPGKVASVC--------DVSALQPAD 154 (314)
Q Consensus 133 ---------------------l~~----~-------------------------~~~~~~~~~--------~~~~~~~~~ 154 (314)
+++ . .++.+.... +..+.+++.
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKW 278 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccc
Confidence 011 0 000000000 000000000
Q ss_pred C------cCc----c--------------------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHH
Q psy10938 155 N------STV----A--------------------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVH 192 (314)
Q Consensus 155 ~------~~~----~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 192 (314)
. ... . ...+....++....++.++..++++++.|++.|
T Consensus 279 ~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD 358 (509)
T KOG2504|consen 279 RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLAD 358 (509)
T ss_pred cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcC
Confidence 0 000 0 456778889999999999999999999999999
Q ss_pred Hhh--hHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhh
Q psy10938 193 KMG--AKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGL 270 (314)
Q Consensus 193 ~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~ 270 (314)
+.. +++...++.+..+++.+...+..+.+.......+++++.+.........+.|+.+.+.-..+.|+...+..++..
T Consensus 359 ~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l 438 (509)
T KOG2504|consen 359 KPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGAL 438 (509)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHH
Confidence 987 566777788888888888888888888888888899888888888888999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHhcc
Q psy10938 271 TGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSMFLP 306 (314)
Q Consensus 271 ~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 306 (314)
++|++.|.+.|..+ ...|+..+...++++.+.+..+
T Consensus 439 ~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 439 VGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999887 4567777777777776665544
No 79
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.82 E-value=4.8e-18 Score=148.07 Aligned_cols=251 Identities=21% Similarity=0.214 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccc-hhHHHHHHHHHHHHHhHHHHh
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQG-RKITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~ 112 (314)
+..+++.+.....+.|..|.+.++.|.|..|+|.+.+...+...++++++|.++||++ +||++.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666667778888899999999999999999999999999999999999986 677887877877777777777
Q ss_pred hhHHHHHHHHHHHhhcccCC------------------------------------------------------------
Q psy10938 113 AQYYGVFLALRFINGFASRP------------------------------------------------------------ 132 (314)
Q Consensus 113 ~~~~~~l~~~r~l~G~~~~P------------------------------------------------------------ 132 (314)
.++++.++..-++..+...|
T Consensus 88 ~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 167 (400)
T PF03825_consen 88 SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAI 167 (400)
T ss_pred hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Confidence 88888888877777776663
Q ss_pred -----------CCCCCccc--chhhhh--------hhcCCcCCCcCcc-------------------cccC-CCChhHHH
Q psy10938 133 -----------LIPGHPGK--VASVCD--------VSALQPADNSTVA-------------------TCSG-EVNPEVFS 171 (314)
Q Consensus 133 -----------l~~~~~~~--~~~~~~--------~~~~~~~~~~~~~-------------------~~~~-~~~~~~~~ 171 (314)
+++.++++ +++.++ .+++++....... ++.+ .+....+.
T Consensus 168 ~~~ll~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~ 247 (400)
T PF03825_consen 168 LSLLLAGFALFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGI 247 (400)
T ss_pred HHHHHHHHHHhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHH
Confidence 11111000 000000 1111000000000 2333 45566666
Q ss_pred HHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHH----HHHHhhhhhchhheeeec
Q psy10938 172 HTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-TSTQNLILSC----IFEALTGCCISVVYCIMV 246 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 246 (314)
..++..+.+++.-...+++.+|+|.++++.++.+..++-..++.... +.+....... +-+...+..+.....++.
T Consensus 248 ~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~ 327 (400)
T PF03825_consen 248 LWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYID 327 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 67788889999999999999999999999999999999998888873 3333333333 356677777888889999
Q ss_pred ccccchhhHHHHHHHHhhh-hhhhhhHHHHHHHHHhhhh
Q psy10938 247 DLFPTNLRVLAAALSSTFG-RFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~-~~g~~~~p~~~g~l~~~~~ 284 (314)
+..|++.|++++++++... .+|..+|..++|++.|+.+
T Consensus 328 ~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 328 RIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999875 5999999999999999876
No 80
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.1e-18 Score=146.05 Aligned_cols=267 Identities=12% Similarity=0.112 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHh
Q psy10938 28 ILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCG 107 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 107 (314)
..+..+....++-++......+++|.+++.|+++..|.+++...++.+|.+.+++.|.+.+|+|+|+.++.++.++.++.
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 44555555666777777888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH---hhhHHHHHHHHHHHhhcccC-------C-------------------------------------C-------
Q psy10938 108 IASS---VAQYYGVFLALRFINGFASR-------P-------------------------------------L------- 133 (314)
Q Consensus 108 ~~~~---~~~~~~~l~~~r~l~G~~~~-------P-------------------------------------l------- 133 (314)
.++. ...+|..++.+-|+.|.|.+ | +
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9985 66789999999999999999 2 0
Q ss_pred -----------------------------------CCCCcccchhh-----------hhhhcCCcCCCcCcc--------
Q psy10938 134 -----------------------------------IPGHPGKVASV-----------CDVSALQPADNSTVA-------- 159 (314)
Q Consensus 134 -----------------------------------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-------- 159 (314)
..+.|+.+... .+.++++..+.-...
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~E 252 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAE 252 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHhHH
Confidence 01111111100 011110000000000
Q ss_pred ------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q psy10938 160 ------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILS 227 (314)
Q Consensus 160 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (314)
+..+....++....+..+.+.++|++++.++..|+...+.+....+...+.++...+.++.+. +...
T Consensus 253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l 331 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYAL 331 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHH
Confidence 335667788889999999999999999999999999999999988888888888888877544 4455
Q ss_pred HHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHH
Q psy10938 228 CIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLI 297 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~ 297 (314)
.+.+++.+..+|..++...+..| ++ ....|....+..+|+++.|++.|++.|..+ ...+.....++.+
T Consensus 332 ~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~l 400 (422)
T COG0738 332 FLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYL 400 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 66788999999999999999998 33 344455666777999999999999999988 3333333333333
No 81
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.79 E-value=1.6e-17 Score=149.60 Aligned_cols=276 Identities=14% Similarity=0.042 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhccccc-----chhHH-HHHHHHHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQ-----GRKIT-LIGALLVD 103 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~ 103 (314)
....+..++..+.......+.+|.+.++.|.|.+++|.+ +.....+ ++++++|+++||+ ||||. +..+.+..
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 334445556667777788888999999999999999997 4444444 6899999999999 99885 66777777
Q ss_pred HHHhHHHHhh---hHHHHHHHHHHHhhcccC--------------C----------------------------------
Q psy10938 104 GLCGIASSVA---QYYGVFLALRFINGFASR--------------P---------------------------------- 132 (314)
Q Consensus 104 ~~~~~~~~~~---~~~~~l~~~r~l~G~~~~--------------P---------------------------------- 132 (314)
.++....++. ++++.+.+.+++.|++.+ |
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7777777664 478889999999998887 1
Q ss_pred ----------------------CCCCCcc--cch--------hhhhhhcCCcCCCcCcc--------------------c
Q psy10938 133 ----------------------LIPGHPG--KVA--------SVCDVSALQPADNSTVA--------------------T 160 (314)
Q Consensus 133 ----------------------l~~~~~~--~~~--------~~~~~~~~~~~~~~~~~--------------------~ 160 (314)
+++..++ +++ +..+.++.+........ +
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~ 251 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIR 251 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111100 000 01111111000000000 2
Q ss_pred ccCCCChhHHHHH-HHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHhc-chhHHHHHHHHHHHhhh
Q psy10938 161 CSGEVNPEVFSHT-LIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL---YYVQ-TSTQNLILSCIFEALTG 235 (314)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 235 (314)
..+.+..+.+... ....++.++|.+++|++.||+|+|+.+..+..+..+..+.+ .... +.+......++..++.+
T Consensus 252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g 331 (491)
T PRK11010 252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGG 331 (491)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 3566777777766 45567899999999999999999887766555444433222 2222 22222223333333444
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHhccc
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL-ILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
...+..+++..+..|++.+++..|+.+....+|..+++.+.|.+.|..|+ ..|.+.+++.+.+.+....+++
T Consensus 332 ~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 332 MGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44565677888888888899999999999999999999999999998874 4455666666666666655544
No 82
>KOG2615|consensus
Probab=99.78 E-value=3.3e-18 Score=141.58 Aligned_cols=226 Identities=19% Similarity=0.229 Sum_probs=164.6
Q ss_pred cccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC------
Q psy10938 58 FGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASR------ 131 (314)
Q Consensus 58 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~------ 131 (314)
-+.+..-.|.+.|.+.+...+.++.+|.++||+|||++++.|+....++..+.+.++|+..++++|++.|+..|
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~r 142 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIR 142 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHH
Confidence 33455667999999999999999999999999999999999999999999999999999777778999999999
Q ss_pred ------------------------------C---------------------------------------CCCCCc----
Q psy10938 132 ------------------------------P---------------------------------------LIPGHP---- 138 (314)
Q Consensus 132 ------------------------------P---------------------------------------l~~~~~---- 138 (314)
| +++.-+
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 1 111111
Q ss_pred -ccchhhhhhhcCCc----CC---------C--cCc--c----------------------------cccCCCChhHHHH
Q psy10938 139 -GKVASVCDVSALQP----AD---------N--STV--A----------------------------TCSGEVNPEVFSH 172 (314)
Q Consensus 139 -~~~~~~~~~~~~~~----~~---------~--~~~--~----------------------------~~~~~~~~~~~~~ 172 (314)
+++....|..+..+ .. . ... . ...++++.+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v 302 (451)
T KOG2615|consen 223 NDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV 302 (451)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence 11111111111100 00 0 000 0 2335666777777
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMG--AKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
....++.+.+.+.......||.. -+-.+.....++.-.++++.....+........+..+......+..........|
T Consensus 303 l~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~ 382 (451)
T KOG2615|consen 303 LSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGP 382 (451)
T ss_pred eehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCC
Confidence 77776666666666666666654 4445555555555566666666666666777777777778888888999999999
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
++.||+..|+..+.+.++.++||.+.|.+....
T Consensus 383 ~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 383 QSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred cccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 999999999999999999999999999888764
No 83
>KOG4686|consensus
Probab=99.77 E-value=2e-18 Score=137.50 Aligned_cols=278 Identities=14% Similarity=0.094 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc-cchhHHHHHHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT-QGRKITLIGALLVDG 104 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~ 104 (314)
|...+...|+..+-+++.....+.+..++..|.+++.++..++.|.|.+...+.+.+.|++.|| +|-|..-++-+....
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~ 121 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVF 121 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHH
Confidence 3445555555556666666677777888899999999999999999999999999999999995 788876666666666
Q ss_pred HHhHHHH---hhhHHHHHHHHHHHhhcccC--------------------------------------------------
Q psy10938 105 LCGIASS---VAQYYGVFLALRFINGFASR-------------------------------------------------- 131 (314)
Q Consensus 105 ~~~~~~~---~~~~~~~l~~~r~l~G~~~~-------------------------------------------------- 131 (314)
++.++++ ..+.+|++..+||+.|+|.-
T Consensus 122 ~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~ 201 (459)
T KOG4686|consen 122 LGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGR 201 (459)
T ss_pred HHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHH
Confidence 7777665 47899999999999999976
Q ss_pred --C-----------------------------CCCCCcc-----cchhhhhhhcCCcCCCcCcc----------------
Q psy10938 132 --P-----------------------------LIPGHPG-----KVASVCDVSALQPADNSTVA---------------- 159 (314)
Q Consensus 132 --P-----------------------------l~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------------- 159 (314)
| +.+++.+ ++....+..+....+...+.
T Consensus 202 ~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~f 281 (459)
T KOG4686|consen 202 MFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWF 281 (459)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHH
Confidence 0 0000000 00000000000000000000
Q ss_pred -----------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHhcchhHHHHHH
Q psy10938 160 -----------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSG-VAMALYYVQTSTQNLILS 227 (314)
Q Consensus 160 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 227 (314)
+..+.++..++.+.+.......+...+.|.++||+|++...+.+..+..+ +-..+.+. .+..+...
T Consensus 282 PFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m 359 (459)
T KOG4686|consen 282 PFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSM 359 (459)
T ss_pred HHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHH
Confidence 45577788888777777777888888999999999999776655544433 33333332 23334455
Q ss_pred HHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHH
Q psy10938 228 CIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL-----ILICTLAAMLLIAGVFS 302 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-----~~~~~~~~~~~~~~~~~ 302 (314)
.+.|..........+..++.++|++..|+++|..+.+.++|-++.|++.|.+.|..+. ..|...+.+.+....+.
T Consensus 360 ~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil 439 (459)
T KOG4686|consen 360 TFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGIL 439 (459)
T ss_pred HHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 5566555665666788888999999999999999999999999999999999998662 22344455555554444
Q ss_pred Hhc
Q psy10938 303 MFL 305 (314)
Q Consensus 303 ~~~ 305 (314)
+.+
T Consensus 440 ~~~ 442 (459)
T KOG4686|consen 440 FYL 442 (459)
T ss_pred hhe
Confidence 444
No 84
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.76 E-value=5.6e-17 Score=160.83 Aligned_cols=236 Identities=15% Similarity=0.007 Sum_probs=169.3
Q ss_pred HHHhhcccccccccccc--chhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHH---hhhHHHHHH
Q psy10938 46 VLSFVLPSAQCDFGMTS--SDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASS---VAQYYGVFL 120 (314)
Q Consensus 46 ~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~ 120 (314)
....+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++.+.++..++.++.. .+++++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAF 107 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 33444455555566554 3479999999999999999999999999999999998877665555443 457899999
Q ss_pred HHHHHhhcccC---C---------------------------------------C-CC----------------------
Q psy10938 121 ALRFINGFASR---P---------------------------------------L-IP---------------------- 135 (314)
Q Consensus 121 ~~r~l~G~~~~---P---------------------------------------l-~~---------------------- 135 (314)
+.|+++|++.+ | + ..
T Consensus 108 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 108 AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 99999999888 1 0 00
Q ss_pred --------------CCcccch--------hhh---hhhcCCcCCCc-Ccc-----------------------cccCCCC
Q psy10938 136 --------------GHPGKVA--------SVC---DVSALQPADNS-TVA-----------------------TCSGEVN 166 (314)
Q Consensus 136 --------------~~~~~~~--------~~~---~~~~~~~~~~~-~~~-----------------------~~~~~~~ 166 (314)
..+.... ... +..+....... ... ...+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 267 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDN 267 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCc
Confidence 0000000 000 00000000000 000 2345555
Q ss_pred h-hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeee
Q psy10938 167 P-EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIM 245 (314)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
. ..++......++.+++.++.+++.||+++++.+.++.++.+++.+++.+..+.+..++..++.+++.+...+...+++
T Consensus 268 ~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 347 (1146)
T PRK08633 268 TFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALI 347 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 6 677888888899999999999999999998888888777777777777666666666667777777787788888999
Q ss_pred cccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 246 VDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 246 ~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
.+..|++.|++++|+.+.+.++|..+++.+.+.+..
T Consensus 348 ~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 348 QFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred hhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888888766654
No 85
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.75 E-value=1.1e-16 Score=132.14 Aligned_cols=275 Identities=20% Similarity=0.182 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHH
Q psy10938 27 YILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLC 106 (314)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 106 (314)
+..+..+.+..+-.--..+..+|+++++++|+|+|.+..|+++++..+...+.+++..++++|+|.++.+..++++..++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33333333444444445677899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHHhhcccC------C------------------------------------------------
Q psy10938 107 GIASSVAQYYGVFLALRFINGFASR------P------------------------------------------------ 132 (314)
Q Consensus 107 ~~~~~~~~~~~~l~~~r~l~G~~~~------P------------------------------------------------ 132 (314)
.++-... +.+.++.+-.+.|.|.+ |
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~ 169 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALG 169 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHH
Confidence 9998877 67778888888888888 2
Q ss_pred -------------CCCCCcccchhh-------hhhhcCCcCCCcCcc-------------------cccCCCChhHHHHH
Q psy10938 133 -------------LIPGHPGKVASV-------CDVSALQPADNSTVA-------------------TCSGEVNPEVFSHT 173 (314)
Q Consensus 133 -------------l~~~~~~~~~~~-------~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~ 173 (314)
++....+...+. .+.++++........ .+.+.+..+++...
T Consensus 170 ~WAl~allAl~~WlPq~~r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~ll 249 (395)
T COG2807 170 FWALLALLALLIWLPQALREQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLL 249 (395)
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHH
Confidence 111000000000 001111100000000 57789999999999
Q ss_pred HHHHhhhhhHHhHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccc-
Q psy10938 174 LIIGLACIPSSLAMPLLVHKM-GAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPT- 251 (314)
Q Consensus 174 ~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 251 (314)
+...+.+++..+....+.+|. ++|+.......++.+..+.+.+.+....... .++.|++.+.+++.....+.+..++
T Consensus 250 sl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a 328 (395)
T COG2807 250 SLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDA 328 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCCh
Confidence 999999999999999999975 4666667777777777777777776555444 5788889999999998888877654
Q ss_pred hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHH
Q psy10938 252 NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 252 ~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~ 303 (314)
+..++-.|+.+.++++-..+||++.|++.|..| ...+..++...++..+.-+
T Consensus 329 ~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 329 AIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 556888899999999999999999999999987 3334444444444444333
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.75 E-value=8.6e-17 Score=143.36 Aligned_cols=236 Identities=13% Similarity=0.075 Sum_probs=161.7
Q ss_pred hhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc----cchhH-HHHHHHHHHHHHhHHHHhhhH------HH
Q psy10938 49 FVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT----QGRKI-TLIGALLVDGLCGIASSVAQY------YG 117 (314)
Q Consensus 49 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~ 117 (314)
.+.+.+.+++|+++.++|++.++..+..++.+|+.|+++|| +|||| .++.+....+++.+++.+.++ ..
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34566777899999999999999999999999999999997 67745 577788888888777776553 44
Q ss_pred HHHHHHHHhhcccC----C-------------------------------------------------------------
Q psy10938 118 VFLALRFINGFASR----P------------------------------------------------------------- 132 (314)
Q Consensus 118 ~l~~~r~l~G~~~~----P------------------------------------------------------------- 132 (314)
.+++.+++.+++.+ |
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 55666677666544 1
Q ss_pred -------------CCCCCcc-cc-----hhhhhhhcCCcCCCcCcc-----------------------cccCCCChhHH
Q psy10938 133 -------------LIPGHPG-KV-----ASVCDVSALQPADNSTVA-----------------------TCSGEVNPEVF 170 (314)
Q Consensus 133 -------------l~~~~~~-~~-----~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 170 (314)
+++++++ +. .+..+..+...+++.... ..........+
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFS 260 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHH
Confidence 0111000 00 000000000000000000 11111234445
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHhhhhhchhheeeecccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-TSTQNLILSCIFEALTGCCISVVYCIMVDLF 249 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
.......++.+++.++.+++.||+|+|+.+..+..+..++.+...+.+ +.+......++.+++.+...+..++..+|..
T Consensus 261 ~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (437)
T TIGR00792 261 YMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTV 340 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 556667888899999999999999999999888888777776665544 3344445556667777777788888888876
Q ss_pred c-------chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 250 P-------TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 250 p-------~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
| ++.+|++.|+.+....+|..+++.+.|.+.+..|
T Consensus 341 ~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 341 DYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5 4567999999999999999999999999988654
No 87
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.74 E-value=2.6e-16 Score=135.20 Aligned_cols=144 Identities=12% Similarity=0.046 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 167 PEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
...+...+...+.+++...+..++.+|+|.|+.+.++..++.+-.....+.++++.....-.+-+.-.........-|+.
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~ 338 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYIT 338 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677777889999999999999999999999999999999999999999998888888888777788888889999
Q ss_pred ccccchhhHHHHHHH-HhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc-ccCCC
Q psy10938 247 DLFPTNLRVLAAALS-STFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL-PATGK 310 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~-~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 310 (314)
+.+|++..++.+.+. +...++|.++.+.+.|.+.|+.| ...+++.+.+.+...++..+. +++++
T Consensus 339 ~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 339 AHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 999999999999996 56667999999999999999998 567888888877777766554 44333
No 88
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.74 E-value=4e-16 Score=139.93 Aligned_cols=275 Identities=10% Similarity=-0.016 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccc-cc--cccccchhhHHhHhhHHHHHHhhhhhhhcccc-cchhHHHHHHHHHHHH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQ-CD--FGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT-QGRKITLIGALLVDGL 105 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~ 105 (314)
+..+....+.+.+..+...+.+|.+. ++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++..+..+.++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 33444556666666666666666654 44 89999999999999999999999999999999 8999999999999999
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhcccC---C--------------------------------------------------
Q psy10938 106 CGIASSVAQYYGVFLALRFINGFASR---P-------------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~l~~~r~l~G~~~~---P-------------------------------------------------- 132 (314)
+.++.+++++++.+.+.|++.|++.| |
T Consensus 92 g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~ 171 (475)
T TIGR00924 92 GHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYH 171 (475)
T ss_pred HHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 99999999999999999999999987 1
Q ss_pred -------------------CCC---CCc-ccc---hhhhhh---------------------------------------
Q psy10938 133 -------------------LIP---GHP-GKV---ASVCDV--------------------------------------- 147 (314)
Q Consensus 133 -------------------l~~---~~~-~~~---~~~~~~--------------------------------------- 147 (314)
.++ +.+ +++ ++..+.
T Consensus 172 ~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (475)
T TIGR00924 172 VGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVI 251 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 011 000 000 000000
Q ss_pred ------hcCCcCC---CcCc-c---------------------------cccCCC----ChhHHHHHHHHHhhhhhHHhH
Q psy10938 148 ------SALQPAD---NSTV-A---------------------------TCSGEV----NPEVFSHTLIIGLACIPSSLA 186 (314)
Q Consensus 148 ------~~~~~~~---~~~~-~---------------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 186 (314)
..++... +.+. . +..+.. ........++..+..++...+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~ 331 (475)
T TIGR00924 252 IFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPV 331 (475)
T ss_pred HHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHH
Confidence 0000000 0000 0 011111 112445556666666665555
Q ss_pred HHHHHHHhhhH-----HH--HHHHHHHHHHHHHHHHH---------hcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 187 MPLLVHKMGAK-----WF--LVAGLVLSSGVAMALYY---------VQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 187 ~g~l~d~~g~~-----~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
..++-.|.+|| .. +..+.++.+++++...+ ..+.+..+...++.+++.....|..+++..|..|
T Consensus 332 ~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP 411 (475)
T TIGR00924 332 LAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP 411 (475)
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC
Confidence 44443444432 22 35677777777666653 2466667778888899999999999999999999
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
++.||+++|+......+|..+++.+.....+..+ ...+...++..++..++.++
T Consensus 412 ~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 412 QRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887766654 33344445544444444433
No 89
>KOG2532|consensus
Probab=99.74 E-value=2.3e-16 Score=139.33 Aligned_cols=250 Identities=18% Similarity=0.257 Sum_probs=180.2
Q ss_pred ccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhH--HHHHHHHHHHhhcccC-
Q psy10938 55 QCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQY--YGVFLALRFINGFASR- 131 (314)
Q Consensus 55 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~- 131 (314)
..++++|+.+.+++.+.+++|+.+++++.|+++||+|.|+++..+.++.++++++...+.+ ++.+++.|+++|++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 3468899999999999999999999999999999999999999999999999999988754 4577899999999999
Q ss_pred -------------C--------------------------------------------------------CCCCCcccch
Q psy10938 132 -------------P--------------------------------------------------------LIPGHPGKVA 142 (314)
Q Consensus 132 -------------P--------------------------------------------------------l~~~~~~~~~ 142 (314)
| +..++|++++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 2 1222222221
Q ss_pred -----hhhhhhcCCcCCCcC-----cc-----------------------------------cccCCCChhHHHHHHHHH
Q psy10938 143 -----SVCDVSALQPADNST-----VA-----------------------------------TCSGEVNPEVFSHTLIIG 177 (314)
Q Consensus 143 -----~~~~~~~~~~~~~~~-----~~-----------------------------------~~~~~~~~~~~~~~~~~~ 177 (314)
+.+...+.+.....+ +- +..+.+..+.++..++..
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 111111111111111 10 456888899999999999
Q ss_pred hhhhhHHhHHHHHHHHhhh---------HHHHHHHHHHHHHHHHHHHHhcchhH--HHHHHHHHHHhhhhhchhheeeec
Q psy10938 178 LACIPSSLAMPLLVHKMGA---------KWFLVAGLVLSSGVAMALYYVQTSTQ--NLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 178 ~~~~~~~~~~g~l~d~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
+...+..+++|.++||..+ |..-.++....+++++.+.+.+.... .+.+..+.....+...+-.+....
T Consensus 305 l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~ 384 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ 384 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh
Confidence 9999999999999998743 45556777777788888877774333 233333333333443344444444
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh-h--hh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID-G--HC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~-~--~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
+.. +++.+..+|+.+....+.++++|.+.|.+.+ . .. ...|++.+++.+++.++..+.
T Consensus 385 ~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 385 DIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred hcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 444 4677999999999999999999999999994 2 12 456777777777777655443
No 90
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.73 E-value=1.9e-16 Score=156.87 Aligned_cols=253 Identities=13% Similarity=0.033 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh-cccccccccccc-chhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHH---HHHHHHH
Q psy10938 31 IFGGLLYAYAAISITVLSFV-LPSAQCDFGMTS-SDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIG---ALLVDGL 105 (314)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~~ 105 (314)
...++..+.+++....+..+ ...+..+.+.+. ...++..+++.+.+.+.++++|+++||+|||+++.. ..+....
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 33344555555554444333 334555554443 457888999999999999999999999999997533 2223333
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhcccC---C--------------------------------------------------
Q psy10938 106 CGIASSVAQYYGVFLALRFINGFASR---P-------------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~l~~~r~l~G~~~~---P-------------------------------------------------- 132 (314)
..+.....+|+++++++|+++|++.+ |
T Consensus 98 ~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 98 LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 33333445899999999999999988 2
Q ss_pred ----------------CCCCCcccch-----h-hhh---hhcCCcCCCcCcc------------------------cccC
Q psy10938 133 ----------------LIPGHPGKVA-----S-VCD---VSALQPADNSTVA------------------------TCSG 163 (314)
Q Consensus 133 ----------------l~~~~~~~~~-----~-~~~---~~~~~~~~~~~~~------------------------~~~~ 163 (314)
+++..+++.. . ..+ .++.......... ...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 257 (1140)
T PRK06814 178 ALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLG 257 (1140)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcC
Confidence 1111111000 0 000 0010000000000 2345
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--------------------cchhHH
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV--------------------QTSTQN 223 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 223 (314)
.+....+...+...++.++|.++.+++.|+..+++.+..+.++.+++.+.+.+. ++.+..
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRI 337 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHH
Confidence 667778888899999999999999999988776655554444444444333332 444555
Q ss_pred HHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 224 LILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.+..++.+++.+...+...+.+.+..|++.||+++|+.+....++..+++++.|.+.+..
T Consensus 338 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~ 397 (1140)
T PRK06814 338 LIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG 397 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 556666777788888888999999999999999999999999999999999999998643
No 91
>KOG3764|consensus
Probab=99.72 E-value=7.3e-17 Score=134.45 Aligned_cols=248 Identities=16% Similarity=0.083 Sum_probs=170.2
Q ss_pred cccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC----
Q psy10938 56 CDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASR---- 131 (314)
Q Consensus 56 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~---- 131 (314)
++.+-++.++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|+.++..+++++++.++++++++.|.+||+|.+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 3456677899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ----------C---------------------------------------------------------CCC--CC---cc
Q psy10938 132 ----------P---------------------------------------------------------LIP--GH---PG 139 (314)
Q Consensus 132 ----------P---------------------------------------------------------l~~--~~---~~ 139 (314)
| ++. .+ .+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~~ 258 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDSTE 258 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccccc
Confidence 1 121 11 11
Q ss_pred cchhhhhhhcCCcCCCcC--------------cc------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhh--hH
Q psy10938 140 KVASVCDVSALQPADNST--------------VA------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMG--AK 197 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~--------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~ 197 (314)
+..+..++.+.+...... ++ +.......+.++......+...++..+.|.+.||++ |.
T Consensus 259 ~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~w 338 (464)
T KOG3764|consen 259 QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRW 338 (464)
T ss_pred cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhH
Confidence 222233333332211100 00 122222335666666677888899999999999999 54
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc---ch---hhHHHHHHHHhhhhhhhhh
Q psy10938 198 WFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP---TN---LRVLAAALSSTFGRFGGLT 271 (314)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~---~r~~~~g~~~~~~~~g~~~ 271 (314)
.....+.+..+.++....+.++....++-.+..++..+...........+++. .+ ..|..+++......+|.++
T Consensus 339 l~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~ 418 (464)
T KOG3764|consen 339 LLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAI 418 (464)
T ss_pred HHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhc
Confidence 44455556666666666676665555444444444444443333333333332 23 5688999999999999999
Q ss_pred HHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH
Q psy10938 272 GNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 272 ~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
||.++|.+.+..| .....+.+...++-+-++.
T Consensus 419 GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 419 GPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred cccccchheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 3344444444444443333
No 92
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.72 E-value=1.5e-15 Score=133.29 Aligned_cols=271 Identities=15% Similarity=0.074 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHH--hHhhHHHHHHhhhhhh-hcccccchhHHHHHHHHHH-HH
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWL--NAAPMLGMVFGSYFWG-CLADTQGRKITLIGALLVD-GL 105 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~-~~ 105 (314)
...++..++..+.......|.+|.+.+|.|.|.+++|++ .++..+...+.+++++ +..||+||||..++...+. ..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455667788888888889999999999999999999997 4677888888888884 5799999999865554332 21
Q ss_pred HhHHHH---hhhH-HHHHHHHHHHhhcccC---C----------------------------------------------
Q psy10938 106 CGIASS---VAQY-YGVFLALRFINGFASR---P---------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~---~~~~-~~~l~~~r~l~G~~~~---P---------------------------------------------- 132 (314)
...... ...+ ..+++...++.++..+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 111111 1222 2233333333333333 0
Q ss_pred --------------------CCCCCccc-c---hh---hhhhhcCCcCCCcCcc-------------------cccCCCC
Q psy10938 133 --------------------LIPGHPGK-V---AS---VCDVSALQPADNSTVA-------------------TCSGEVN 166 (314)
Q Consensus 133 --------------------l~~~~~~~-~---~~---~~~~~~~~~~~~~~~~-------------------~~~~~~~ 166 (314)
+.++++++ + .. ..+..+++........ .+.+.+.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~ 242 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPL 242 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCH
Confidence 11211111 0 00 1112221110000000 3456777
Q ss_pred hhHHHHHHHHHh-hhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh------cchhHHHHHHHHHHHhhhhhch
Q psy10938 167 PEVFSHTLIIGL-ACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV------QTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
.+.+........ ..+++.++.|++.||+|+|+.+..+..+..+..+..... ++.........+.++..+...+
T Consensus 243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 322 (390)
T TIGR02718 243 EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSV 322 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 777777776654 566788999999999999998887766553332222211 1122222222333445566666
Q ss_pred hheeeecccccc-hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH-HHHHHHHHHHHHHHH
Q psy10938 240 VVYCIMVDLFPT-NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL-ILICTLAAMLLIAGV 300 (314)
Q Consensus 240 ~~~~~~~~~~p~-~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-~~~~~~~~~~~~~~~ 300 (314)
..+....+..++ +.+++.+++.+...++|..++|.+.|.+.|..|. ..+...+.+.+++.+
T Consensus 323 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 323 AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 666676666665 8899999999999999999999999999998884 556555555555443
No 93
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.71 E-value=1.7e-15 Score=133.62 Aligned_cols=267 Identities=15% Similarity=0.055 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhccccc-----chhH-HHHHHHHHHHHHh
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQ-----GRKI-TLIGALLVDGLCG 107 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~ 107 (314)
...++..+.........+|.+.++.|+|.+++|++..+... .+.++++|+++||+ |||| .+..+..+.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34556666767777788999999999999999999777775 59999999999999 8775 7888888888777
Q ss_pred HHHHhh---hHHHHHHHHHHHhhcccC--------------C--------------------------------------
Q psy10938 108 IASSVA---QYYGVFLALRFINGFASR--------------P-------------------------------------- 132 (314)
Q Consensus 108 ~~~~~~---~~~~~l~~~r~l~G~~~~--------------P-------------------------------------- 132 (314)
...++. .+++.+++..++.+...+ |
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 777776 457777777777776555 1
Q ss_pred ------------------CCCCCccc--chh--------hhhhhcCCcCCCcCcc--------------------cccCC
Q psy10938 133 ------------------LIPGHPGK--VAS--------VCDVSALQPADNSTVA--------------------TCSGE 164 (314)
Q Consensus 133 ------------------l~~~~~~~--~~~--------~~~~~~~~~~~~~~~~--------------------~~~~~ 164 (314)
++++++++ +++ ..+..+++........ +..+.
T Consensus 163 ~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~ 242 (402)
T PRK11902 163 TYLLMAGLMLAGALTTLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGF 242 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 11111110 000 1111111110000000 23455
Q ss_pred CChhHHHHHHHHH-hhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHhc-chhHHHHHHH----HHHHhhh
Q psy10938 165 VNPEVFSHTLIIG-LACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL---YYVQ-TSTQNLILSC----IFEALTG 235 (314)
Q Consensus 165 ~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~----~~~~~~~ 235 (314)
+..+.+......+ ++.+++.++++++.||+++|+.+..+..+..+..+.+ ...+ +.+....... ..++..+
T Consensus 243 ~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 322 (402)
T PRK11902 243 SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTA 322 (402)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 5556666554443 4578899999999999999988776666555444333 2333 3333333322 3344455
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHHHHhcc
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLI-LICTLAAMLLIAGVFSMFLP 306 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 306 (314)
...+....++.+.+|.+.+ ++.+....++...++.+.|.+.|..|+. .+...+.+.+++.++....+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 323 AFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566677788888776554 5555556677776777899999998844 45555666666555554443
No 94
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=1.3e-15 Score=128.61 Aligned_cols=153 Identities=17% Similarity=0.224 Sum_probs=130.6
Q ss_pred cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhch
Q psy10938 160 TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
...+.+..+..+......+..++|+++.|++.||+|.|+++..+.++..+.++...+............+.+.+.+..++
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 35677888888999999999999999999999999999999999998888888888887777777888889999999999
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHhcccCCCCC
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSMFLPATGKKE 312 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (314)
..-++.++++|+++.++.+|+++..++..+.++|+..+.+.+.++ ...+.....+..++.++....|+.++++
T Consensus 361 ~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 361 SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCCCcc
Confidence 999999999999999999999999999999999999999999887 4455555556666655555556554444
No 95
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.66 E-value=1.5e-14 Score=130.07 Aligned_cols=252 Identities=10% Similarity=-0.019 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc-cchhHHHHHHHHHHHH
Q psy10938 28 ILVIFGGLLYAYAAISITVLS-FVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT-QGRKITLIGALLVDGL 105 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~ 105 (314)
+.+..++...+...+..+... .+...+.+++|.+..+.+++.+.+.....+..+++|+++|| +||||++..+.+++.+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 334444445555555554443 44556678899999999999999998899999999999999 9999999999999999
Q ss_pred HhHHHHhhhHHHH-HHHHHHHhhcccC---C-------------------------------------------------
Q psy10938 106 CGIASSVAQYYGV-FLALRFINGFASR---P------------------------------------------------- 132 (314)
Q Consensus 106 ~~~~~~~~~~~~~-l~~~r~l~G~~~~---P------------------------------------------------- 132 (314)
+.+.++++++... ++++|+++|+|.| |
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 9999999876444 5589999999988 1
Q ss_pred -----------------------CCCC--Ccccc-hhhhhh---------------------------------------
Q psy10938 133 -----------------------LIPG--HPGKV-ASVCDV--------------------------------------- 147 (314)
Q Consensus 133 -----------------------l~~~--~~~~~-~~~~~~--------------------------------------- 147 (314)
+++. +++++ .+....
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 253 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIF 253 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 1111 11110 000000
Q ss_pred -hcCCcCCCc-Ccc-----------------------------c-ccCCC----ChhHHHHHHHHHhhhhhHHhHHHHHH
Q psy10938 148 -SALQPADNS-TVA-----------------------------T-CSGEV----NPEVFSHTLIIGLACIPSSLAMPLLV 191 (314)
Q Consensus 148 -~~~~~~~~~-~~~-----------------------------~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~l~ 191 (314)
.+..+.++. +.+ . ..+.. .........+..+..++...+.+++.
T Consensus 254 ~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~ 333 (489)
T PRK10207 254 FREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIY 333 (489)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHH
Confidence 000000000 000 0 01110 11223334444455656667788999
Q ss_pred HHhhhHH-------HHHHHHHHHHHHHHHH-----HHh-----cchhHHHHHHHHHHHhhhhhchhheeeecccccchhh
Q psy10938 192 HKMGAKW-------FLVAGLVLSSGVAMAL-----YYV-----QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLR 254 (314)
Q Consensus 192 d~~g~~~-------~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r 254 (314)
||+++|+ -+..+.++.+++++.+ .+. .+.+......++.+.+.....+...+.+.+..|++.+
T Consensus 334 ~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 334 THLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred HHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 9999886 3556666666665432 121 1344555667778889999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHH
Q psy10938 255 VLAAALSSTFGRFGGLTGNLMFGFL 279 (314)
Q Consensus 255 ~~~~g~~~~~~~~g~~~~p~~~g~l 279 (314)
+.++|+.+...++|+.++..+....
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998887644
No 96
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.64 E-value=3.5e-14 Score=126.32 Aligned_cols=152 Identities=17% Similarity=0.267 Sum_probs=126.5
Q ss_pred cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHH--------hcchhHHHHHHHH
Q psy10938 160 TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK--WFLVAGLVLSSGVAMALYY--------VQTSTQNLILSCI 229 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 229 (314)
...+.+..+......+..+.+++|.++.+++.||+|.| +++..+..+..+..+.-.+ ..+.+..++..++
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~ 389 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL 389 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence 45678888888888999999999999999999999988 7777766666444444344 4567788888889
Q ss_pred HHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHhccc
Q psy10938 230 FEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
.|.+.+..++..-++.+|+.|+++.+..+|++...+...+.+||.+.|.+.|..+ ...+....++.+++.++....+.
T Consensus 390 ~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 390 IGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999987 56666677777777777666655
Q ss_pred CCCC
Q psy10938 308 TGKK 311 (314)
Q Consensus 308 ~~~~ 311 (314)
+|++
T Consensus 470 ~~g~ 473 (477)
T PF11700_consen 470 EKGR 473 (477)
T ss_pred hhhh
Confidence 5443
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.62 E-value=3.8e-14 Score=128.06 Aligned_cols=106 Identities=8% Similarity=0.115 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 24 KFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
++||..+..........+. .+.++...|.+++++|+|..+.+++.+.. ..+...+++.|++.||+|||+++.++.+++
T Consensus 24 ~~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSF-MYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3455555544444433333 34566778889999999999999998774 455678889999999999999999999999
Q ss_pred HHHhHHHHhh------hHHHHHHHHHHHhhcccC
Q psy10938 104 GLCGIASSVA------QYYGVFLALRFINGFASR 131 (314)
Q Consensus 104 ~~~~~~~~~~------~~~~~l~~~r~l~G~~~~ 131 (314)
.++.++++++ ++++.+.+.|++.|+|.+
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~ 135 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCM 135 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHH
Confidence 9999999997 689999999999999987
No 98
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.62 E-value=3.9e-14 Score=127.30 Aligned_cols=244 Identities=20% Similarity=0.246 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHH
Q psy10938 37 YAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYY 116 (314)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (314)
....++.....+.+++.+..|+|-+ ....|+.+...++.+++.++.|+++|.||||++++.+.++..+|.+.++.++|.
T Consensus 53 ~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~ 131 (599)
T PF06609_consen 53 VIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNM 131 (599)
T ss_pred HHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcH
Confidence 3334444445566788899999865 677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccC-------------C---------------------------------------------------
Q psy10938 117 GVFLALRFINGFASR-------------P--------------------------------------------------- 132 (314)
Q Consensus 117 ~~l~~~r~l~G~~~~-------------P--------------------------------------------------- 132 (314)
..++.+..+.|+|.| |
T Consensus 132 ~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 999999999999988 1
Q ss_pred ------CCCCCcc---cchhhhhhhcC------------------------Cc-CCCcCcc-------------------
Q psy10938 133 ------LIPGHPG---KVASVCDVSAL------------------------QP-ADNSTVA------------------- 159 (314)
Q Consensus 133 ------l~~~~~~---~~~~~~~~~~~------------------------~~-~~~~~~~------------------- 159 (314)
.++++++ ++.+.++.+++ .. .......
T Consensus 212 l~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE 291 (599)
T PF06609_consen 212 LIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWE 291 (599)
T ss_pred HHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhh
Confidence 0111000 00001111100 00 0000000
Q ss_pred -----------------------------------------------cccCCCC---hhHHHHHHHHHhhhhhHHhHHHH
Q psy10938 160 -----------------------------------------------TCSGEVN---PEVFSHTLIIGLACIPSSLAMPL 189 (314)
Q Consensus 160 -----------------------------------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~ 189 (314)
...+.+. ...+......+++...|.++.+.
T Consensus 292 ~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~ 371 (599)
T PF06609_consen 292 WFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGL 371 (599)
T ss_pred hhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHH
Confidence 1111221 23455666677778888888888
Q ss_pred HHHHhhh-HHHHHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhh
Q psy10938 190 LVHKMGA-KWFLVAGLVLSSGVAMALYYV--QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGR 266 (314)
Q Consensus 190 l~d~~g~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 266 (314)
+..++++ |+.+..+.+++.+++-++... ++....+...++.+++.+...........-..|+++-+++.|+..++..
T Consensus 372 l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~ 451 (599)
T PF06609_consen 372 LFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRS 451 (599)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHH
Confidence 8888765 455556666666554444433 2333445666677777777777777777778899999999999999999
Q ss_pred hhhhhHHHHHHHHHh
Q psy10938 267 FGGLTGNLMFGFLID 281 (314)
Q Consensus 267 ~g~~~~p~~~g~l~~ 281 (314)
+|+.++.-+...+..
T Consensus 452 ~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 452 IGGSIGYAIYNAIFT 466 (599)
T ss_pred HhhHHHHHHHHHHHH
Confidence 999999888866653
No 99
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.62 E-value=9.4e-15 Score=126.72 Aligned_cols=220 Identities=14% Similarity=0.108 Sum_probs=147.9
Q ss_pred HHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhccccc-----chhHH-HHHHHHHHHHHhHHHHhh---hH
Q psy10938 45 TVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQ-----GRKIT-LIGALLVDGLCGIASSVA---QY 115 (314)
Q Consensus 45 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~ 115 (314)
...++..|.+.+|+|+|.+++|+..+. .+...+ ++++|+++||+ ||||. ++.+.++.++.....++. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 345678899999999999999999655 555555 99999999998 89897 467777777776676666 45
Q ss_pred HHHHHHHHHHhhcccC--------------C-------------------------------------------------
Q psy10938 116 YGVFLALRFINGFASR--------------P------------------------------------------------- 132 (314)
Q Consensus 116 ~~~l~~~r~l~G~~~~--------------P------------------------------------------------- 132 (314)
.+.+....++.+.+.+ |
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 6666666667776555 1
Q ss_pred --------------CCCCCccc---c-hhhh---hhhcC-CcCCCc-Ccc------------------------cccCCC
Q psy10938 133 --------------LIPGHPGK---V-ASVC---DVSAL-QPADNS-TVA------------------------TCSGEV 165 (314)
Q Consensus 133 --------------l~~~~~~~---~-~~~~---~~~~~-~~~~~~-~~~------------------------~~~~~~ 165 (314)
+.++.+++ + +... +..+. .+++.. ... ...+.+
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 242 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFS 242 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 01111000 0 0000 00000 000000 000 234556
Q ss_pred ChhHHHHHHHHH-hhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----------cchhHHHHHHHHHHHh
Q psy10938 166 NPEVFSHTLIIG-LACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV-----------QTSTQNLILSCIFEAL 233 (314)
Q Consensus 166 ~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 233 (314)
..+.+......+ +..+++.++++++.||+|+|+.+..+.++.++...+..+. ++.+......++.+++
T Consensus 243 ~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 322 (356)
T TIGR00901 243 KEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVT 322 (356)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHH
Confidence 666666565544 5678899999999999999998888887777766655443 2234444455566778
Q ss_pred hhhhchhheeeecccccchhhHHHHHHHHhhhh
Q psy10938 234 TGCCISVVYCIMVDLFPTNLRVLAAALSSTFGR 266 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 266 (314)
.+..++...++..|.+|+++|++.+|+.+...+
T Consensus 323 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 323 GGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 888999999999999999999999999887754
No 100
>KOG2533|consensus
Probab=99.62 E-value=4.9e-14 Score=125.04 Aligned_cols=251 Identities=14% Similarity=0.116 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHH
Q psy10938 26 HYILVIFGGLLYAYAAISITVLSF-VLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDG 104 (314)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 104 (314)
...++..++..++..+.+...++- .+-.+.+|.+....+.+.+.++++++++++++++|.+.||++-.+.+....++++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 345566666777777777766543 4566889999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHhhhHHHHHHHHHHHhhcccC---C-------------------------------------------------
Q psy10938 105 LCGIASSVAQYYGVFLALRFINGFASR---P------------------------------------------------- 132 (314)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~r~l~G~~~~---P------------------------------------------------- 132 (314)
+..++.....|++.+++.|++.|+.++ |
T Consensus 123 ~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 123 LFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 999888889999999999999999999 3
Q ss_pred ------------------------CCCCCc-------ccchh-hhhhhcCCcC---CCcCcc------------------
Q psy10938 133 ------------------------LIPGHP-------GKVAS-VCDVSALQPA---DNSTVA------------------ 159 (314)
Q Consensus 133 ------------------------l~~~~~-------~~~~~-~~~~~~~~~~---~~~~~~------------------ 159 (314)
++.... +++.- ..+..+.... ++.+..
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~ 282 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCY 282 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHH
Confidence 111111 11000 0111111110 000000
Q ss_pred -------------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHH----hhhHHHHHHHHHHHHHHH-HHHH
Q psy10938 160 -------------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHK----MGAKWFLVAGLVLSSGVA-MALY 215 (314)
Q Consensus 160 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~~~~~~~-~~~~ 215 (314)
...+++..++..+.....++++++.+++|+++|| ..+|........+..+.- +.+.
T Consensus 283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~ 362 (495)
T KOG2533|consen 283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLL 362 (495)
T ss_pred HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2234677888889999999999999999999999 667766665554444433 4444
Q ss_pred HhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhh-HHHHHHHHhhhhhhhhhHHHHH
Q psy10938 216 YVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLR-VLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r-~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
.................+.....+.......+....+.| -+..+........+++++|.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 363 AAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred hhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 443344444444444455666666667777776655444 4444444444445555544443
No 101
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.61 E-value=6.4e-14 Score=126.52 Aligned_cols=246 Identities=10% Similarity=-0.051 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHHHhh-ccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc-cchhHHHHHHHHHHHHHhHH
Q psy10938 32 FGGLLYAYAAISITVLSFV-LPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT-QGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~ 109 (314)
.++...+...+..+..... .+.+.+++|+++.+.+++.+.+........+++|+++|| +|||+.+..+.++..++..+
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444 444568899999999998888776666777899999999 59999999999999999999
Q ss_pred HHhhh-HHHHHHHHHHHhhcccC---C-----------------------------------------------------
Q psy10938 110 SSVAQ-YYGVFLALRFINGFASR---P----------------------------------------------------- 132 (314)
Q Consensus 110 ~~~~~-~~~~l~~~r~l~G~~~~---P----------------------------------------------------- 132 (314)
+++++ +.+.+.+.|+++|++.| |
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~ 184 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFA 184 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 88874 56677788999999887 1
Q ss_pred -------------------CCCC--Ccccc-hhhhhh---------------------------------------h-cC
Q psy10938 133 -------------------LIPG--HPGKV-ASVCDV---------------------------------------S-AL 150 (314)
Q Consensus 133 -------------------l~~~--~~~~~-~~~~~~---------------------------------------~-~~ 150 (314)
++++ +++.+ .+..+. . +.
T Consensus 185 i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (500)
T PRK09584 185 LSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEA 264 (500)
T ss_pred HHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11100 000000 0 00
Q ss_pred CcCC-CcCcc--------------------------c-ccC-------CCChhHHHHHHHHHhhhhhHHhHH----HHHH
Q psy10938 151 QPAD-NSTVA--------------------------T-CSG-------EVNPEVFSHTLIIGLACIPSSLAM----PLLV 191 (314)
Q Consensus 151 ~~~~-~~~~~--------------------------~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----g~l~ 191 (314)
.+.+ ..+.+ . ..+ ...........+..+..++...+. +++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~ 344 (500)
T PRK09584 265 FAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMG 344 (500)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhC
Confidence 0000 00000 0 001 011224445555555555555555 4444
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhcc---------hhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHH
Q psy10938 192 HKMGAKWFLVAGLVLSSGVAMALYYVQT---------STQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSS 262 (314)
Q Consensus 192 d~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 262 (314)
+|.+..+.+.++.++.+++++.+....+ .+......++.+++.....|...+++.+..|++.||+++|+..
T Consensus 345 ~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 345 DRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4455557778888888888877655533 3456667778888999999999999999999999999999776
Q ss_pred hhhhhhhhhHHHHHH
Q psy10938 263 TFGRFGGLTGNLMFG 277 (314)
Q Consensus 263 ~~~~~g~~~~p~~~g 277 (314)
....+|..++..+.+
T Consensus 425 l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 425 LTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555555544443
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.59 E-value=2.4e-13 Score=120.36 Aligned_cols=139 Identities=14% Similarity=0.052 Sum_probs=104.2
Q ss_pred HHHHHHhhhhhHHhHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHhcc---------------------hhHHHHHHHH
Q psy10938 172 HTLIIGLACIPSSLAMPLLVHKMGA-KWFLVAGLVLSSGVAMALYYVQT---------------------STQNLILSCI 229 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 229 (314)
......+...+.+++-.++.+|+|+ |.....+.++.++++....+..+ .+..+.....
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI 389 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence 3445555556667778888999984 67778888888888877765442 1445666677
Q ss_pred HHHhhhhhchhheeeecccccc--hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHh
Q psy10938 230 FEALTGCCISVVYCIMVDLFPT--NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC---LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~--~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~ 304 (314)
.|+.....+...++++++..|+ +..|..+|+.|.+..+.+++..+..|.+.+..+ ...+.+.++.++++++...+
T Consensus 390 ~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 390 LGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred hhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999985 445999999999999999999999998766655 34556667777777777665
Q ss_pred c-ccCCC
Q psy10938 305 L-PATGK 310 (314)
Q Consensus 305 ~-~~~~~ 310 (314)
+ |++++
T Consensus 470 ~~~~~~~ 476 (477)
T TIGR01301 470 LLPRPRV 476 (477)
T ss_pred hCCCCCC
Confidence 4 77653
No 103
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.57 E-value=1.2e-13 Score=119.82 Aligned_cols=157 Identities=10% Similarity=-0.061 Sum_probs=118.2
Q ss_pred HHHHHHhhccccccccccccch-hhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q psy10938 43 SITVLSFVLPSAQCDFGMTSSD-KGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLA 121 (314)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (314)
-+...+.+.|.+.+|+|+|++| .|.+.+.++.+|++.+++.|+++||+|.|+++..+.+.+++..++.++++++..+.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788899999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHH--
Q psy10938 122 LRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWF-- 199 (314)
Q Consensus 122 ~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-- 199 (314)
.|++.|++.|| .- ..........+.++ .....+...+...++.+++.+++++ ...+|+|..
T Consensus 121 ~R~llGvaEA~---~~-A~~syI~~WfP~kE------------R~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~ 183 (511)
T TIGR00806 121 MEVFYSVTMAA---RI-AYSSYIFSLVPPSR------------YQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYST 183 (511)
T ss_pred HHHHHHHHHHH---HH-HHHHHHHHHCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHH
Confidence 99999999982 11 11111111111111 2334556677777888888888888 456787653
Q ss_pred -HHHHHHHHHHHHHHHHH
Q psy10938 200 -LVAGLVLSSGVAMALYY 216 (314)
Q Consensus 200 -~~~~~~~~~~~~~~~~~ 216 (314)
..++.....+++++..+
T Consensus 184 Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 23344444444444333
No 104
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.55 E-value=2.2e-13 Score=125.91 Aligned_cols=149 Identities=13% Similarity=0.137 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHH
Q psy10938 31 IFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIAS 110 (314)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 110 (314)
+..++..+.........+..++.++++|+++..+.|++.+.+.++++++.++.+++.||+|||+.+.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44445666677777888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhh---------------------------------------------------HHHHHHHHHHHhhcccCCCCCCCcc
Q psy10938 111 SVAQ---------------------------------------------------YYGVFLALRFINGFASRPLIPGHPG 139 (314)
Q Consensus 111 ~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~Pl~~~~~~ 139 (314)
++.+ .+..++++|+++|+|.+|+ .+.
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~---~~~ 192 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI---FPL 192 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc---hhc
Confidence 8763 2567789999999999832 112
Q ss_pred cchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh
Q psy10938 140 KVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM 194 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 194 (314)
...-..|..+.++ .+...+.......++..+|.++++++.+.+
T Consensus 193 ~~~~i~d~~~~~~------------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 193 GISYIDDFAKSKN------------SPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred CchhhhccCCccc------------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 2222223222221 344556666777777888888888877643
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.54 E-value=5.2e-13 Score=119.31 Aligned_cols=236 Identities=12% Similarity=0.029 Sum_probs=148.4
Q ss_pred hhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc----cchhH-HHHHHHHHHHHHhHHHHhhhH------HH
Q psy10938 49 FVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT----QGRKI-TLIGALLVDGLCGIASSVAQY------YG 117 (314)
Q Consensus 49 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~ 117 (314)
.+.+.+.+++|+|+.++|.+.++..+..++..|+.|.++|| +|||| .++.+....+++..+....|+ +.
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34556677899999999999999999999999999999998 78755 556677777776655544432 34
Q ss_pred HHHHHHHHhhcccC----C---------------------------------------C---------------------
Q psy10938 118 VFLALRFINGFASR----P---------------------------------------L--------------------- 133 (314)
Q Consensus 118 ~l~~~r~l~G~~~~----P---------------------------------------l--------------------- 133 (314)
.+++..++.+.+.. | +
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 44444444443332 2 0
Q ss_pred --------------CCC-Ccccc--hhh----hhhhcCCcCCCcCcc-------------------cccCCCChhHHHHH
Q psy10938 134 --------------IPG-HPGKV--ASV----CDVSALQPADNSTVA-------------------TCSGEVNPEVFSHT 173 (314)
Q Consensus 134 --------------~~~-~~~~~--~~~----~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~ 173 (314)
+++ +++++ .+. ++..++++....... ..............
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 270 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFL 270 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHH
Confidence 000 00000 000 001111100000000 01111122223334
Q ss_pred HHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHhhhhhchhheeeeccccc-
Q psy10938 174 LIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV--QTSTQNLILSCIFEALTGCCISVVYCIMVDLFP- 250 (314)
Q Consensus 174 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 250 (314)
....+..+++.++.+++.||+|+|+.+..+.....+......+. ++.+...+..++.+++.+...+..++..+|..+
T Consensus 271 ~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~ 350 (444)
T PRK09669 271 VTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDY 350 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44556677888899999999999999887776655444333333 234445555667788888888888999988875
Q ss_pred ------chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 251 ------TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 251 ------~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
++..|...|..+....+|..++|.+.|.+.+..|
T Consensus 351 ~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 351 EEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred hhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2335677899999999999999999999988654
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.52 E-value=4.3e-13 Score=120.20 Aligned_cols=257 Identities=12% Similarity=0.058 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccc-----hhHHHHHHHH
Q psy10938 27 YILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQG-----RKITLIGALL 101 (314)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~ 101 (314)
.....++...++..+........+.|.+.+++|+|+++++...+...+...+-.+ +|+++||++ ||+.++++.+
T Consensus 25 ~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred chHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 3445555566777777733445566777788999999999999999999999666 999999998 7888888877
Q ss_pred HHH-HHhHHHHhhhHHHHHH-HHHHHhhcccC--------------C---------------------------------
Q psy10938 102 VDG-LCGIASSVAQYYGVFL-ALRFINGFASR--------------P--------------------------------- 132 (314)
Q Consensus 102 ~~~-~~~~~~~~~~~~~~l~-~~r~l~G~~~~--------------P--------------------------------- 132 (314)
+.. +.....+..++..... +..++.+++.+ |
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 763 4433344445544444 47778777776 0
Q ss_pred ------------------------CCCCC----cccchh-------------------hhhhhcCCcCCCcC-------c
Q psy10938 133 ------------------------LIPGH----PGKVAS-------------------VCDVSALQPADNST-------V 158 (314)
Q Consensus 133 ------------------------l~~~~----~~~~~~-------------------~~~~~~~~~~~~~~-------~ 158 (314)
+++++ ++..+. ..+..+..+++... .
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl 263 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFL 263 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 12211 110000 00011000000000 0
Q ss_pred --c--------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----
Q psy10938 159 --A--------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV----- 217 (314)
Q Consensus 159 --~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~----- 217 (314)
. ...+.++...+......+++.+++....+++.+|++.|+.+..+.++.+++.+.....
T Consensus 264 ~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~ 343 (468)
T TIGR00788 264 SYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWN 343 (468)
T ss_pred HHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccc
Confidence 0 3567788889988888999999999999999999999999998888888766543211
Q ss_pred -----cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 218 -----QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 218 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
++.+.......+.++..+..+.....++.+..|++.+++.+++.+++.++|..+++.++|.+.+..|
T Consensus 344 ~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 344 LAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred cccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2222233344556666667777778999999999999999999999999999999999999998765
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.52 E-value=4.7e-13 Score=119.04 Aligned_cols=235 Identities=15% Similarity=0.118 Sum_probs=168.9
Q ss_pred hhccccccccccccchhhHHhHhhHHHHHHhhhhhhhccc----ccchhHHH-HHHHHHHHHHhHHHHhh-h-------H
Q psy10938 49 FVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLAD----TQGRKITL-IGALLVDGLCGIASSVA-Q-------Y 115 (314)
Q Consensus 49 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~~-~-------~ 115 (314)
.+.+.+.+.+|+++...|++..+.-+..++..|+.|.++| |+||||.. +.+....+++.++.... | .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4456666778999999999999999999999999999999 89977765 57878888887777765 4 2
Q ss_pred HHHHHHHHHHhhcccC----C-----------------------------------------------------------
Q psy10938 116 YGVFLALRFINGFASR----P----------------------------------------------------------- 132 (314)
Q Consensus 116 ~~~l~~~r~l~G~~~~----P----------------------------------------------------------- 132 (314)
...+.+..++..++.. |
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2334555555555555 2
Q ss_pred ---------------CCC--CCcccc---hhhhhhhcCCcCCCcCcc------------------------cccCCCChh
Q psy10938 133 ---------------LIP--GHPGKV---ASVCDVSALQPADNSTVA------------------------TCSGEVNPE 168 (314)
Q Consensus 133 ---------------l~~--~~~~~~---~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 168 (314)
.++ ++++++ .+..+..+...+++.... ...+. ...
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~-~~~ 261 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGN-EGL 261 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcC-chh
Confidence 011 000000 011111110000000000 11222 244
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 169 VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ--TSTQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.........+..+++.++.++++||+|+|+....+..+.+++.+.+.+.+ +.+..++...+.+.+.+..+...++..+
T Consensus 262 ~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~a 341 (428)
T PF13347_consen 262 ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLA 341 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccc
Confidence 55566677888899999999999999999999999999999988887776 7777788888889999999999999999
Q ss_pred ccccc-------hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 247 DLFPT-------NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 247 ~~~p~-------~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
|..+. +..|...|+.+....++..+++.+.|.+.+..|
T Consensus 342 d~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 342 DVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred cchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 98863 345899999999999999999999999887643
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.52 E-value=1.7e-12 Score=116.21 Aligned_cols=110 Identities=17% Similarity=0.250 Sum_probs=85.0
Q ss_pred HHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHhhhhhchhheeeecccccc
Q psy10938 174 LIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ--TSTQNLILSCIFEALTGCCISVVYCIMVDLFPT 251 (314)
Q Consensus 174 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 251 (314)
....++.+++.++.+++.||+|+|+.+..+.++..++.+.+.+.+ +.+......++.+++.+...+...+..+|..|.
T Consensus 271 ~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~ 350 (448)
T PRK09848 271 VQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEY 350 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 333456777888999999999999999988888777776666544 233334445566777788888888888888765
Q ss_pred h-------hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 252 N-------LRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 252 ~-------~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
+ .+|...|+.+....+|..+++.+.|.+.+..
T Consensus 351 ~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 351 GEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred hHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 3599999999999999999999999987654
No 109
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.44 E-value=2.7e-12 Score=112.34 Aligned_cols=146 Identities=13% Similarity=0.108 Sum_probs=122.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+......++.+++.+...+....+
T Consensus 38 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 117 (385)
T TIGR00710 38 PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQAL 117 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHH
Confidence 55678888889999999999999999999999999999999988888888888887777777778888888888888999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcccCCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPATGK 310 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~ 310 (314)
+.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+++.+++.++..+... ..||+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 118 VRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999998876 4456666665555555443 3466543
No 110
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.44 E-value=3.8e-12 Score=110.41 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=115.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-----chhHHHHHHHHHHHhhhhhch
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-----TSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (314)
+..+.+...+...++..++.++.|+++||+|||+.+..+..+..++.++..+.. +.+..+...++.+++.+...+
T Consensus 32 s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 111 (365)
T TIGR00900 32 SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTP 111 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 556788888899999999999999999999999999998888777777666665 667777777778888888888
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
...++..|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+++.++..+++.+....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 112 AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999998877 44555555555554444333
No 111
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.43 E-value=3.7e-12 Score=109.99 Aligned_cols=138 Identities=21% Similarity=0.171 Sum_probs=118.0
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhee
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.+..+.+...+...++..++.++.|++.||+|||+.+..+..+.+++.+...+.++.+..+...++.+++.+...+....
T Consensus 29 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 108 (352)
T PF07690_consen 29 LSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNA 108 (352)
T ss_dssp TTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccc
Confidence 36677888899999999999999999999999999999999999888555555566677777778888888899999999
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHH
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVF 301 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~ 301 (314)
++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+++.+++.++..++
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 109 LIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 99999999999999999999999999999999999997776 45677777777776654
No 112
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.42 E-value=2.2e-11 Score=113.59 Aligned_cols=144 Identities=18% Similarity=0.126 Sum_probs=117.0
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+....++..+...++.+++.+++|+++||+|||+.+.++.++..++.++..+.++.+.+++..++.+++.++..+....+
T Consensus 200 s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~ 279 (742)
T TIGR01299 200 PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSY 279 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888889999999999999999999999999998888888888888888888888888999999999999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-------------H-HHHHHHHHHHHHHHHHHHhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-------------L-ILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
+.|.+|++.|++..++.+.+..+|.++++.+...+....+ + ..+++.++..++..+..+++||+
T Consensus 280 isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 280 FAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPES 357 (742)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999988776664322 2 23334444444444445566876
No 113
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.42 E-value=3.5e-12 Score=111.68 Aligned_cols=146 Identities=15% Similarity=0.183 Sum_probs=123.4
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++..+..+.++.+......++.+++.+...+...
T Consensus 25 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 104 (399)
T TIGR00893 25 GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGII 104 (399)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHH
Confidence 34667788889999999999999999999999999999999998888888888888888888888888888888899999
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh-cccC
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF-LPAT 308 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~ 308 (314)
.++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+.+.+++.++..+...+ .+|+
T Consensus 105 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 105 LIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 999999999999999999999999999999999999888876 45566666665555554443 3443
No 114
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=4.9e-12 Score=111.15 Aligned_cols=144 Identities=15% Similarity=0.045 Sum_probs=120.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.+..|.+.||+|||+.+..+..+..++.+...+.++.+..++..++.+.+.+...+...++
T Consensus 42 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~ 121 (390)
T PRK03545 42 QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASL 121 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677888888888888999999999999999999999999999998888888888887777777777777777888889
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (314)
+.|.+|+++|+++.|+......+|..++|++.+.+.+..+ ...+++.+.+.++..+... .+||.
T Consensus 122 i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 122 AIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999988877 5566666666655544433 34543
No 115
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.42 E-value=5.8e-12 Score=110.74 Aligned_cols=144 Identities=11% Similarity=0.049 Sum_probs=120.9
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|.+.||+|||+.+..+..+.+++.++..+.++.+..+...++.+++.+...+....+
T Consensus 53 s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 132 (394)
T PRK10213 53 SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASL 132 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 56677888888889999999999999999999999999999999988888888888888888888888888888999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (314)
+.|.+|+++|+++.++.....++|..++|.+.+.+.+..+ ...+++.+.+.+++.+... ..||+
T Consensus 133 i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 133 TMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999998877 4455555555544443333 34654
No 116
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.41 E-value=9.3e-12 Score=112.07 Aligned_cols=118 Identities=10% Similarity=0.071 Sum_probs=85.5
Q ss_pred hhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---h-c-chhHHHHHHHHHHHhhhhhchhh
Q psy10938 167 PEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYY---V-Q-TSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
...+.......+..+++.++.+++.||+|+|+.+..+..+..++.+.... . + +.+...+..++.+++.+..++..
T Consensus 266 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~ 345 (473)
T PRK10429 266 DLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQ 345 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555666788889999999999999999988777665555444332 1 2 23334444555667777777777
Q ss_pred eeeeccccc-------chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 242 YCIMVDLFP-------TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 242 ~~~~~~~~p-------~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
+++.+|..+ .+..|..+|.......++..+++.+.|.+.+..|
T Consensus 346 ~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888855 3345668899999999999999999999987543
No 117
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.41 E-value=8.4e-12 Score=110.40 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=121.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.++..+...++..++.+..|++.||+|||+.+..+.++..++.++..+.++.+..+..-++.+++.+...+....+
T Consensus 41 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 120 (412)
T TIGR02332 41 SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLY 120 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 56678888899999999999999999999999999999999999988888888888888888888898888888888889
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh------hh-HHHHHHHHHHHHHHHHHH-HhcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG------HC-LILICTLAAMLLIAGVFS-MFLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 309 (314)
+.|.+|+++|+++.++.+....+|..++|.+.+.+.+. .+ ...|.+.++..++..++. +++||++
T Consensus 121 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 121 LTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999988752 34 456666666655444433 4456654
No 118
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.41 E-value=7e-12 Score=93.16 Aligned_cols=131 Identities=21% Similarity=0.152 Sum_probs=108.0
Q ss_pred HHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhh
Q psy10938 175 IIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLR 254 (314)
Q Consensus 175 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r 254 (314)
...++..++.+..+++.||+|||+.+..+.....++.+.....++.+......++.+++.+...+....+..|.+|+++|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 34567788899999999999999999988888888887777777777777777778888888888888999999999999
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHhc
Q psy10938 255 VLAAALSSTFGRFGGLTGNLMFGFLIDGHCL-ILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 255 ~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 305 (314)
+++.++.+....+|..++|.+.+.+.+..++ ..+++.+.+.+++.+...+.
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999988764 55666666666655554443
No 119
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.40 E-value=7.1e-12 Score=109.55 Aligned_cols=146 Identities=18% Similarity=0.196 Sum_probs=122.0
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.....+.++.+......++.+++.+...+...
T Consensus 22 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 101 (377)
T PRK11102 22 GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVIN 101 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667888888999999999999999999999999999999999999888888888777777777778888888888888
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccC
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPAT 308 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~ 308 (314)
+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+++.+.+.++..+.. .++||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 102 ALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999998776 455666666665555443 344654
No 120
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.39 E-value=6.5e-12 Score=110.37 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=110.9
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+....++....+.+...+..++.|++.||+|||+++..+..+..+..+...+..+. +...++.+.+.+...|...++
T Consensus 36 s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~ 112 (393)
T PRK11195 36 PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGI 112 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 44567778888889999999999999999999999999998887766665554443 444566788888899999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
+.|.+|+++|+++.|+.+....++..+||.++|.+.+......+.+.+.+.+++.+....+||.
T Consensus 113 i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~ 176 (393)
T PRK11195 113 LTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRL 176 (393)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999998754444444444444444444455654
No 121
>PRK10054 putative transporter; Provisional
Probab=99.39 E-value=6.8e-12 Score=110.35 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=113.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...+...++.+..|+++||+|||+.+..+.....++.+.+.+.++.+..+....+.+...+...+....+
T Consensus 41 s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 120 (395)
T PRK10054 41 SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAW 120 (395)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888888888999999999999999999999988888888888887777776655554445555555666777888
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSM-FLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (314)
..|..|++.|+++.|+.+...++|..++|.+.+.+.+......+...+++.+++.+... ++||+
T Consensus 121 ~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 121 FADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999988864335667766666666544433 34443
No 122
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.38 E-value=1.5e-11 Score=108.86 Aligned_cols=145 Identities=18% Similarity=0.118 Sum_probs=117.5
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+........+.+.++..++.+..|.++||+|||+++..+..+..++.++..+.++.+..++..++.+++.+...+..+..
T Consensus 49 ~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~ 128 (413)
T PRK15403 49 DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVT 128 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677788888999999999999999999999999998888888888888887777777777777666555666778
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 309 (314)
..|.+|+++++++.++.+....++..++|.+++.+.+..+ ...|++.+++.+++.+.. ..+||++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 129 VQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 8899999999999999999999999999999999988766 556777676666665543 3457754
No 123
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.38 E-value=1.3e-11 Score=108.48 Aligned_cols=145 Identities=17% Similarity=0.142 Sum_probs=117.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|+++||+|||+.+..+..+..+..+.....++.+......++.+.+.+...+....+
T Consensus 36 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 115 (392)
T PRK10473 36 SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAI 115 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 55667778888888999999999999999999999999998888888888777776666666677777777777888899
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 309 (314)
+.|.+|+++|+++.++.+....++..++|.+.+.+.+..+ ...+++.+.+.++..++. ..+||++
T Consensus 116 i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 116 LRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999998887766 455666666655555543 3446653
No 124
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.37 E-value=5.9e-12 Score=113.81 Aligned_cols=144 Identities=15% Similarity=0.098 Sum_probs=120.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+..+...++.+++.+...+....+
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~ 114 (485)
T TIGR00711 35 SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFST 114 (485)
T ss_pred ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 44567788888899999999999999999999999999999999988888888888888888888888888888999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (314)
+.|.+|+++|+++.++......+|..++|.+.|.+.++.+ ...+++.+.+.++..++.. +.||+
T Consensus 115 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 115 LLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999998876 4455555555444444433 34543
No 125
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.37 E-value=1e-11 Score=110.67 Aligned_cols=143 Identities=13% Similarity=0.109 Sum_probs=117.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+.++..++.++..+.++.+......++.+++.+..++....+
T Consensus 56 s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~ 135 (434)
T PRK11663 56 SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKL 135 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 55677888889999999999999999999999999999999999988888888777766666667777777778888899
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHH-HHhccc
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVF-SMFLPA 307 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~ 307 (314)
+.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..+ ...+.+.+++.++..+. .++++|
T Consensus 136 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 136 LTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999998877 44555555554444333 334444
No 126
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.37 E-value=2.2e-11 Score=107.29 Aligned_cols=143 Identities=14% Similarity=0.101 Sum_probs=115.8
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+....++......+...+..++.|+++||+|||+.+..+..+..+..+...+.++.+......++.+++.+...+...++
T Consensus 44 s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~ 123 (400)
T PRK11646 44 AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTAL 123 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788888888888889999999999999999999999999999888888777777777777777777777888888
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-Hhccc
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFS-MFLPA 307 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 307 (314)
+.|.+|+++|+++.|+.+...++|..++|.+.|.+.+......+++.+...++..++. .+.||
T Consensus 124 ~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 124 VIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999984322555666665555544433 34454
No 127
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.36 E-value=1.6e-11 Score=107.53 Aligned_cols=145 Identities=11% Similarity=0.007 Sum_probs=121.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+.++..++..+.++.+..++..++.+++.+...+.....
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 115 (382)
T PRK10091 36 SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIV 115 (382)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 55667888899999999999999999999999999999999999999988888888888888888888888777777788
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 309 (314)
..|..|+++|+++.++......++..++|.+.+.+.+..+ ...+++.+++.++..+.. ..+||.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 116 LSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 8999999999999999999999999999999999988766 456666666555544433 3456643
No 128
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.36 E-value=1.6e-11 Score=108.14 Aligned_cols=144 Identities=14% Similarity=0.114 Sum_probs=117.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+..+...++.+.+.+...+...++
T Consensus 45 s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 124 (405)
T TIGR00891 45 TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAY 124 (405)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 45667888888999999999999999999999999999998888888888888888777777888888888888888999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--H-HHHHHHHHHHHHHHHHHHhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--L-ILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
+.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ + ..+.+.+...++..+.....||+
T Consensus 125 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 191 (405)
T TIGR00891 125 VIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEA 191 (405)
T ss_pred HHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999887654 3 33444333333333333345664
No 129
>KOG2563|consensus
Probab=99.35 E-value=3.4e-11 Score=102.73 Aligned_cols=283 Identities=13% Similarity=0.081 Sum_probs=197.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHH
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALL 101 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 101 (314)
..++||.++++.++..+.+++.+..+++...+....|| +....-|+.-+|.+.+....+++-|+.||+|-|...+++..
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 45678888888888889999999888888888888888 77788899999999999999999999999999999999999
Q ss_pred HHHHHhHHHHhhh------HHH--HHHHHHHHhhcccC-----C------------------------------------
Q psy10938 102 VDGLCGIASSVAQ------YYG--VFLALRFINGFASR-----P------------------------------------ 132 (314)
Q Consensus 102 ~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~-----P------------------------------------ 132 (314)
+.+++..+-..+. .++ ....+..+.+...- |
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 9999998876653 333 44455555555444 1
Q ss_pred C------------------------------------CCCCcccchhhhhhhcC-CcCCC------cCcc----------
Q psy10938 133 L------------------------------------IPGHPGKVASVCDVSAL-QPADN------STVA---------- 159 (314)
Q Consensus 133 l------------------------------------~~~~~~~~~~~~~~~~~-~~~~~------~~~~---------- 159 (314)
+ .+++|+...+..+...+ ....+ ....
T Consensus 198 ilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi 277 (480)
T KOG2563|consen 198 ILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGI 277 (480)
T ss_pred eecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhh
Confidence 0 11111111110000000 00000 0000
Q ss_pred ----------------cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHH-HHHHHHHHHHHHH-HHHHHh---c
Q psy10938 160 ----------------TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKW-FLVAGLVLSSGVA-MALYYV---Q 218 (314)
Q Consensus 160 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~-~~~~~~---~ 218 (314)
...++.+..++.......+.++++..+.|.+.||.+.-+ ..........++. .+.... .
T Consensus 278 ~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~ 357 (480)
T KOG2563|consen 278 GLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLG 357 (480)
T ss_pred hHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 345666788899999999999999999999999987543 3444444444442 222222 2
Q ss_pred chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh----HHH-HHHHHH
Q psy10938 219 TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC----LIL-ICTLAA 293 (314)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~----~~~-~~~~~~ 293 (314)
..+..+....+++++..+..|+.+-+..|..-|...++..|+.+..+++-+.+-.++.+...+..+ +.+ -+....
T Consensus 358 ~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 437 (480)
T KOG2563|consen 358 DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTV 437 (480)
T ss_pred ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHH
Confidence 345566777788989999999999999999766777889999999999999999999998888765 333 333444
Q ss_pred HHHHHHHHHHhc
Q psy10938 294 MLLIAGVFSMFL 305 (314)
Q Consensus 294 ~~~~~~~~~~~~ 305 (314)
.+++..++..+.
T Consensus 438 ~~~l~~~lva~~ 449 (480)
T KOG2563|consen 438 SALLGAILVAFF 449 (480)
T ss_pred HHHHHHHHHhhh
Confidence 455555555554
No 130
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.35 E-value=2.8e-11 Score=109.58 Aligned_cols=144 Identities=17% Similarity=0.181 Sum_probs=116.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+..+....+.++.....+..|+++||+|||+.+..+..+..++.+...+.++.+..++.-++.+++.+...+.....
T Consensus 39 s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~ 118 (495)
T PRK14995 39 SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAG 118 (495)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777788888888889999999999999999999999999999988888888888887788888888777777766
Q ss_pred ecccc-cchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccC
Q psy10938 245 MVDLF-PTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPAT 308 (314)
Q Consensus 245 ~~~~~-p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~ 308 (314)
+.+.+ |+++|+++.|+......+|..++|.+.|.+.++.+ ...|++...+.++..++. .++|+.
T Consensus 119 l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 119 IRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 66665 67899999999999999999999999999999877 455666555555544443 344654
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.35 E-value=1.3e-11 Score=109.04 Aligned_cols=144 Identities=15% Similarity=0.070 Sum_probs=118.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+++..+..+..++.+...+.++.+...+..++.+++.+...+...++
T Consensus 48 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 127 (406)
T PRK11551 48 DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIAL 127 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 56678888899999999999999999999999999999988888887777778888777777888888888888888999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~ 308 (314)
+.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+++.+++.++..+.. .++||+
T Consensus 128 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (406)
T PRK11551 128 TSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPES 193 (406)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999888877766 445555555444444333 345654
No 132
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.35 E-value=3.2e-11 Score=104.84 Aligned_cols=145 Identities=16% Similarity=0.056 Sum_probs=107.9
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhee
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.+..+.+...+.+.++..++.+..|++.||+|||+++.........+.......++.+..+..-++.+.+.+. ......
T Consensus 23 ~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~ 101 (368)
T TIGR00903 23 VSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFA 101 (368)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHH
Confidence 3667788888899999999999999999999999877655544444333223325666667777777777765 344555
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH-HhcccCC
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS-MFLPATG 309 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 309 (314)
...|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ ...|.+.+++.++..++. .++||.+
T Consensus 102 ~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 102 PAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999988877 445666566665555544 3457653
No 133
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.33 E-value=4.5e-10 Score=95.31 Aligned_cols=124 Identities=8% Similarity=0.094 Sum_probs=99.1
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.+..+.+.....+..+..+|+++++++.||+++|+.+..+..+..+..++....+... ......+.+++.+..+|...
T Consensus 174 g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~ 252 (310)
T TIGR01272 174 GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIF 252 (310)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 66778888889999999999999999999999999988888877777766555544433 33455577889999999999
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHH
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILIC 289 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~ 289 (314)
+...+..|++ .+++.++. ..+.+|+++.|.+.|.+.|..+ ..+++
T Consensus 253 s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 253 SLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 9988888754 46677775 5778999999999999999877 44444
No 134
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.32 E-value=4.5e-11 Score=105.61 Aligned_cols=145 Identities=16% Similarity=0.063 Sum_probs=116.0
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+....+.......++..++.++.|.++||+|||+.+..+.....++.+...+.++.+..+...++.+.+.+...+.....
T Consensus 46 s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 125 (406)
T PRK15402 46 GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAA 125 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHH
Confidence 44566777788889999999999999999999999999988888888888777777776666677777766667777888
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ 309 (314)
+.|.+|++.|.++.++......++..++|.+.+.+.+..+ ...+++.+++.+++.+... ..||++
T Consensus 126 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 126 IQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 8999999999999999988888999999999999988766 4566666666665555433 346654
No 135
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=1.4e-11 Score=108.14 Aligned_cols=144 Identities=19% Similarity=0.131 Sum_probs=117.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+.......++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+...+..++.+++.+...+...++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 129 (398)
T TIGR00895 50 DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNAL 129 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHH
Confidence 45567777888888999999999999999999999999998888888888777777777777777888888888999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHH-HHhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVF-SMFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 308 (314)
..|.+|++.|+++.++.+....+|..++|.+.+.+.+..+ ...+++.+.+.++..++ ..++||+
T Consensus 130 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 130 VSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred HHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999998876 34455554444443333 3344554
No 136
>KOG3764|consensus
Probab=99.31 E-value=1e-11 Score=104.10 Aligned_cols=141 Identities=17% Similarity=0.181 Sum_probs=130.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
...+.++......+.+++...+.|.+.||+|+|..+.++..++..+.+++.+..+.+..++.-.+-+.+.........++
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 56678899999999999999999999999999999999999999999999999998888888899999999999999999
Q ss_pred ecccccchh-hHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 245 MVDLFPTNL-RVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 245 ~~~~~p~~~-r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
+++.+|+++ |++++|+.-.+..+|-.++|+++|.++|..| ..+|.+.++++++-..+-+++
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 999999865 6999999999999999999999999999988 889999999999888877665
No 137
>TIGR00898 2A0119 cation transport protein.
Probab=99.30 E-value=5.2e-11 Score=108.26 Aligned_cols=141 Identities=15% Similarity=0.152 Sum_probs=119.1
Q ss_pred ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeee
Q psy10938 166 NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIM 245 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
....+...+...++..++.++.|+++||+|||+++..+.++..++.++..+.++.+..++..++.+++.+...+....++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 205 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLN 205 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHh
Confidence 56778889999999999999999999999999999999999999888888888888888888888989999899999999
Q ss_pred cccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 246 VDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 246 ~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
.|.+|+++|+.+.++......+|.+++|.+.+.+.+ ....+++.++..++..+..+++||+
T Consensus 206 ~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 206 TEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD--WRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred heecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999988888999999988766554 3445555566655555555566764
No 138
>PRK10504 putative transporter; Provisional
Probab=99.30 E-value=8.1e-11 Score=106.08 Aligned_cols=140 Identities=13% Similarity=0.115 Sum_probs=114.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+..+...++.+++.+...+.....
T Consensus 43 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~ 122 (471)
T PRK10504 43 SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLT 122 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 44556666777788888999999999999999999988888888777777777777777777788888888888888899
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
+.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..+ ...|.+...+..++.+....
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 123 VMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLM 183 (471)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999877 44555555555554444433
No 139
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.29 E-value=1.3e-11 Score=107.66 Aligned_cols=145 Identities=13% Similarity=0.061 Sum_probs=118.5
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.+..+.+...+...++..++.++.|+++||+|||+.+..+..+..++.++..+.++.+..++..++.+++.+...+...
T Consensus 26 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 105 (379)
T TIGR00881 26 GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCG 105 (379)
T ss_pred CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchH
Confidence 34567788889999999999999999999999999999999999999988888888888777777888888888889999
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHH-HHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hccc
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGN-LMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPA 307 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p-~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ 307 (314)
+++.|.+|+++|+++.++.+....+|..++| .+.+.+.+..+ ...+++.+.+.++..+... +.+|
T Consensus 106 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 106 RTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred HHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCC
Confidence 9999999999999999999999999999999 46666666555 4556666655555444443 3344
No 140
>KOG2615|consensus
Probab=99.29 E-value=1.1e-11 Score=103.32 Aligned_cols=116 Identities=17% Similarity=0.080 Sum_probs=100.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+...++...+.+.+.+++.+...|.++||+|||.++.++....++...+.....+.......-++.| ..-+..++..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~G-i~kgnl~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGG-IFKGNLSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCchHHHHHH
Confidence 5667888899999999999999999999999999999999999998888887777633333345555 445566778899
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
++|++++++|+.+++..++...+|-++||.++|++.+
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999999999999999999999988
No 141
>KOG3762|consensus
Probab=99.29 E-value=2e-12 Score=112.18 Aligned_cols=129 Identities=16% Similarity=0.151 Sum_probs=111.7
Q ss_pred HHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhh
Q psy10938 175 IIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLR 254 (314)
Q Consensus 175 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r 254 (314)
....+.++.-++.+++.+|+|+-+++..+.....+-++.+.+..++|..+.+-++-+...+..+...-+|+....|++.|
T Consensus 414 ~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~ 493 (618)
T KOG3762|consen 414 LCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLR 493 (618)
T ss_pred hhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcch
Confidence 33345666677888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh-hhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH
Q psy10938 255 VLAAALSSTFGR-FGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 255 ~~~~g~~~~~~~-~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
.++.++...... +|-.+|.+++|.+.+..+ ...|.++++.+++..+...
T Consensus 494 at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 494 ATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 999999988865 999999999999999988 6677777776666555444
No 142
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.29 E-value=4.8e-11 Score=102.81 Aligned_cols=137 Identities=20% Similarity=0.199 Sum_probs=117.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+.......+...++.++.|++.||+|||+.+..+..+..++.+.....++.+......++.+++.+...+...++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 111 (352)
T cd06174 32 SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAAL 111 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHH
Confidence 55678888888999999999999999999999999999999999999888888787777777888888888888999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHH
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVF 301 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~ 301 (314)
..|.+|+++|++..++.+....+|..++|.+.+.+.+..+ ...+++.+...++..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (352)
T cd06174 112 IAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALL 169 (352)
T ss_pred HHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876 44555555555544443
No 143
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.2e-10 Score=99.55 Aligned_cols=144 Identities=17% Similarity=0.104 Sum_probs=132.8
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.+...++...+.+..+..++.++...+.||+.||+++.....+..++-++..+.++.+...+.-++.++..+..++...
T Consensus 44 ~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~ 123 (394)
T COG2814 44 GVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAA 123 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcc
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLP 306 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~ 306 (314)
+...+++|+++|+++.++......+...+|.+++.++-|..| ..+|+..+.+.+++.+..+ .+|
T Consensus 124 ~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 124 ALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999998 6778888888777776544 457
No 144
>PRK11043 putative transporter; Provisional
Probab=99.28 E-value=1e-10 Score=103.19 Aligned_cols=143 Identities=17% Similarity=0.161 Sum_probs=115.4
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+......++.+++.+...+.....
T Consensus 39 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 118 (401)
T PRK11043 39 SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQAL 118 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 55678888889999999999999999999999999999888888888877777777776666666666666666666778
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccc
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
..|.+|++.+++..+..+....++..++|.+.+.+.+..+ ...+++.+.+.++..+...+.+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 119 VIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999989999999998889999999999999999877 45566666666655555554543
No 145
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.28 E-value=1.8e-10 Score=102.71 Aligned_cols=170 Identities=9% Similarity=-0.017 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc-ccccccccchhhHHhHhhHHHHHHhhhhhhhccccc-chhHHHHHHHHHHHHHh
Q psy10938 30 VIFGGLLYAYAAISITVLSFVLPSA-QCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQ-GRKITLIGALLVDGLCG 107 (314)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~ 107 (314)
+..++...+...+..+.+...+|.+ .+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||++..+.++..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3334444444455444444455544 567899999999999999999999999999999999 99999999999999998
Q ss_pred HHHHhhh-HHHHHH--HHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHH
Q psy10938 108 IASSVAQ-YYGVFL--ALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSS 184 (314)
Q Consensus 108 ~~~~~~~-~~~~l~--~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (314)
++.+..+ +...+. +.++..|.|.- .+....-..+..+.++.+ .....+.......++..+++
T Consensus 91 lll~~~~~~~~~~~l~l~li~iG~G~~-----~~~~~alv~elfp~~~~~----------R~sgf~i~Y~~~nlG~~iap 155 (493)
T PRK15462 91 VVLGASEIHPSFLYLSLAIIVCGYGLF-----KSNVSCLLGELYEPTDPR----------RDGGFSLMYAAGNVGSIIAP 155 (493)
T ss_pred HHHHHhhcchhHHHHHHHHHHHhcccc-----cccHHHHHHHHCCCCCcc----------ccceehHHHHHHHHHHHHHH
Confidence 7776543 222233 33444554432 112222334444332211 12234455566668999999
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy10938 185 LAMPLLVHKMGAKWFLVAGLVLSSGVAMAL 214 (314)
Q Consensus 185 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 214 (314)
.+.+++.+++|++..+..+.+.+.++.+..
T Consensus 156 ~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 156 IACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 999999999999988777665555555444
No 146
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.28 E-value=7.3e-11 Score=104.93 Aligned_cols=126 Identities=12% Similarity=-0.020 Sum_probs=110.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+.+++.+...+.++.+..++..++.+++.+...+....+
T Consensus 51 s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~ 130 (426)
T PRK12307 51 TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTY 130 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 44567778888889999999999999999999999999999999998888888888888888888888888888889999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH-HHHHH
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL-ILICT 290 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-~~~~~ 290 (314)
+.|.+|+++|+++.++......+|..++|.+.+.+.+..++ ..+++
T Consensus 131 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 131 AVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred HHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 99999999999999999999999999999999888887764 34443
No 147
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.28 E-value=7.1e-11 Score=106.20 Aligned_cols=140 Identities=11% Similarity=-0.058 Sum_probs=113.8
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHK-MGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
+..+++.......+...++++++|+++|| +|||+++..+..+.+++.+++.+.++.+.......+.+.+.+...+...+
T Consensus 46 s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 125 (475)
T TIGR00924 46 SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSS 125 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHH
Confidence 56678888899999999999999999999 89999999999999998888887766655555666677777778888888
Q ss_pred eecccccchh---hHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 244 IMVDLFPTNL---RVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 244 ~~~~~~p~~~---r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
..+|.+|+++ |+++.++.+...++|..++|.+.|.+.+..+ ...|...++..+++.+...+
T Consensus 126 ~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 126 MVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999998754 8889999999999999999999999999866 45566655555444444333
No 148
>PRK03699 putative transporter; Provisional
Probab=99.27 E-value=2e-10 Score=101.15 Aligned_cols=139 Identities=10% Similarity=0.142 Sum_probs=112.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+......++.+++.+...+.....
T Consensus 40 s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 119 (394)
T PRK03699 40 PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFL 119 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHH
Confidence 45677778888889999999999999999999999999888888888888887777777777777787778778888888
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh-hh-HHHHHHHHHHHHHHHHHHH
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG-HC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~-~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
+.|.+|+++|+++.+..+....+++.++|.+.+.+.+. .+ ...+...+++.++..++.+
T Consensus 120 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 120 ITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888889999999999888754 34 4556665655555444333
No 149
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.27 E-value=1.3e-10 Score=105.50 Aligned_cols=115 Identities=13% Similarity=0.061 Sum_probs=98.4
Q ss_pred ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc------hhHHHHHHHHHHHhhhhhch
Q psy10938 166 NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQT------STQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 239 (314)
....+.......++.+++.++.|++.||+|||+.+..+.++..++.++..+.++ .+..++..++.+++.+...+
T Consensus 55 ~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 55 SSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 345567888888999999999999999999999999888888887777666554 34566777788889999999
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
....+..|.+|++.|+++.++.+....+|..+++.+...+.
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876553
No 150
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.26 E-value=1.5e-10 Score=101.83 Aligned_cols=145 Identities=16% Similarity=0.023 Sum_probs=114.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+......++.+++.+...+....+
T Consensus 41 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~ 120 (394)
T PRK11652 41 REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTL 120 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 56677888888999999999999999999999999999888888888887777777777777777777666666666777
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHH-HHhcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVF-SMFLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 309 (314)
..|.++++.++++.+..+....++..++|.+.+.+.+..+ ...+++.++..++..+. ..+.||++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 121 PRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 8888888999999999999999999999999999988766 44566555554444333 34456643
No 151
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.26 E-value=1.5e-10 Score=104.57 Aligned_cols=145 Identities=15% Similarity=0.088 Sum_probs=111.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---------cc---hhHHHHHHHHHHH
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV---------QT---STQNLILSCIFEA 232 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~ 232 (314)
+..+.+...+...++..++.++.|+++||+|||+++..+..+..++.+...+. ++ .+..++.-++.|+
T Consensus 53 ~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~ 132 (479)
T PRK10077 53 ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI 132 (479)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh
Confidence 56677888999999999999999999999999999999988887776655442 11 2233456677888
Q ss_pred hhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHH--------hhhh-HHHHHHHHHHHHHHHHHHH
Q psy10938 233 LTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLI--------DGHC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~--------~~~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
+.+...+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+. +..+ ...+++.++..++..+...
T Consensus 133 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~ 212 (479)
T PRK10077 133 GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLY 212 (479)
T ss_pred hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999887766553 2234 4456665555555555555
Q ss_pred hcccCC
Q psy10938 304 FLPATG 309 (314)
Q Consensus 304 ~~~~~~ 309 (314)
++||+.
T Consensus 213 ~l~~s~ 218 (479)
T PRK10077 213 FVPETP 218 (479)
T ss_pred cCCCCc
Confidence 667754
No 152
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.25 E-value=8.8e-11 Score=105.66 Aligned_cols=144 Identities=13% Similarity=0.053 Sum_probs=118.0
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHhhhhhch
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV--QTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
.+.+..+.+...+.+.++..++.+..|++.||+|+|+.+..+.++..+..++..+. .+.+..++..++.+++.+...+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchh
Confidence 35577788889999999999999999999999999999998888877776665433 3445566667788888999999
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh-h-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH-C-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.. + ...|++.+++.++..++.+..
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999874 6 556766666665555544443
No 153
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.25 E-value=2e-10 Score=101.08 Aligned_cols=118 Identities=16% Similarity=0.017 Sum_probs=107.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.+..|++.||+|||+++..+..+.+++.+...+.++.+..+...++.+++.+...+.....
T Consensus 42 s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~ 121 (393)
T PRK09705 42 SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSV 121 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHH
Confidence 66778888999999999999999999999999999999999999999999999998888888888888888888888888
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
+.|.+| ++|+++.|+.......|..+++.+.+.+.++.
T Consensus 122 ~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~ 159 (393)
T PRK09705 122 IKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS 159 (393)
T ss_pred HHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888887 77999999999999999999999999988875
No 154
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.24 E-value=1.6e-10 Score=104.89 Aligned_cols=123 Identities=11% Similarity=0.052 Sum_probs=108.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+.+++.+...+.++.+......++.+++.+...+....+
T Consensus 53 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 132 (496)
T PRK03893 53 TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATY 132 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567777888888999999999999999999999999998888888888888777777777788888888888888899
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHH
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLIL 287 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~ 287 (314)
+.|.+|++.|+++.++.+....+|..++|.+.+.+.+..++..
T Consensus 133 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 133 VIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 9999999999999999999999999999999999998877443
No 155
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.24 E-value=9e-11 Score=104.08 Aligned_cols=144 Identities=15% Similarity=0.025 Sum_probs=109.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----hcchhHHHHHHHHHHHhhhhhch
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYY-----VQTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
+..+.+.......++..++.++.|+++||+|||+.+..+..+.+++.+.... .++.+......++.+++.+...+
T Consensus 50 s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 129 (417)
T PRK10489 50 STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVT 129 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4567888889999999999999999999999999888777666665544322 23344445555556666666677
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
.......|.+|+++|+++.++.+...++|..++|.+.|.+.+..+ ...+++.+...+++.+....+|++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (417)
T PRK10489 130 ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPAL 199 (417)
T ss_pred HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 788899999999999999999999999999999999999998766 445555555555555555555654
No 156
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.4e-09 Score=94.95 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=166.3
Q ss_pred ccccccccccccchhhHHhHhhHHHHHHhhhhhhhccc----ccchhHH-HHHHHHHHHHHhHHHHhhhH------HHHH
Q psy10938 51 LPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLAD----TQGRKIT-LIGALLVDGLCGIASSVAQY------YGVF 119 (314)
Q Consensus 51 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~~~------~~~l 119 (314)
+-.+....|+++..+|.+..+.=+--++.-|+.|.++| |+||+|. ++.+.+..++...++..+++ ....
T Consensus 36 l~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467)
T COG2211 36 LFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467)
T ss_pred HHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHH
Confidence 33445668999999999999999999999999999999 5886665 57777888888888887774 3334
Q ss_pred HHHHHHhhcccC----C---------------------------------------------------------------
Q psy10938 120 LALRFINGFASR----P--------------------------------------------------------------- 132 (314)
Q Consensus 120 ~~~r~l~G~~~~----P--------------------------------------------------------------- 132 (314)
++...+.+++.. |
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 455566666666 2
Q ss_pred -----------C-CCCCccc------chhhhh----hhcCCcCCCcCcc--------------------cccCCCChhHH
Q psy10938 133 -----------L-IPGHPGK------VASVCD----VSALQPADNSTVA--------------------TCSGEVNPEVF 170 (314)
Q Consensus 133 -----------l-~~~~~~~------~~~~~~----~~~~~~~~~~~~~--------------------~~~~~~~~~~~ 170 (314)
. |+..+.. +.+..+ .+++++....... ...+.......
T Consensus 196 ~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~ 275 (467)
T COG2211 196 GVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAY 275 (467)
T ss_pred HHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHH
Confidence 0 1111010 011111 1111111000000 34455566666
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHhhhhhchhheeeeccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQT--STQNLILSCIFEALTGCCISVVYCIMVDL 248 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
........+.+++.++...+.+|+|+|+++.++.++..++.+.+.+.+. .+..++..++.+++.+...+..++.++|.
T Consensus 276 ~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~ 355 (467)
T COG2211 276 LLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADT 355 (467)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcch
Confidence 7777777778888999999999999999999999999999999888873 33344444667788888899999999888
Q ss_pred ccc-------hhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 249 FPT-------NLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 249 ~p~-------~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
.+- +..|...|....+.-+|.+++..+.|.+.+..|
T Consensus 356 vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 356 VDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred hhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 642 345888899999999999999999999987654
No 157
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=2.3e-11 Score=103.10 Aligned_cols=145 Identities=15% Similarity=0.135 Sum_probs=131.1
Q ss_pred ccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchh
Q psy10938 161 CSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
+.+.+..+.+.+.+.+.+...++..+.|.++||.+.|..+..+.++++++.+++.+.++.+...++..+-+.+.+..+|.
T Consensus 58 ~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp 137 (448)
T COG2271 58 DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPP 137 (448)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcH
Confidence 34467889999999999999999999999999999999999999999999999999998888888888899999999999
Q ss_pred heeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH--HHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF--GFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~--g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
....+...+|+++||+..++-|+..++|+.+.|.+. +.+.++.+ ...|++-+++.++.+++.+++
T Consensus 138 ~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 138 CARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 88888866 667777788777777766654
No 158
>KOG2325|consensus
Probab=99.23 E-value=9.7e-12 Score=108.62 Aligned_cols=110 Identities=17% Similarity=0.155 Sum_probs=92.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--cccccchhhHHhHhhHHHHHHhhhhhhhcccccch-hHHHHH
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCD--FGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGR-KITLIG 98 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~ 98 (314)
.++.+|+.+.+..+..++.......+.+-.-++.++ .+.+.+..|++.++..++.++++++.|+...|.+. |+.++.
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 455678888888888888888887776655445555 67777889999999999999999999999999996 888999
Q ss_pred HHHHHHHHhHHH-Hh---hh-HHHHHHHHHHHhhcccC
Q psy10938 99 ALLVDGLCGIAS-SV---AQ-YYGVFLALRFINGFASR 131 (314)
Q Consensus 99 ~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~~ 131 (314)
+.++..++.++. .. .+ .-+.++++|++.|+|.+
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~ 145 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG 145 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc
Confidence 999999999988 33 23 67889999999999988
No 159
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.23 E-value=2.2e-10 Score=100.34 Aligned_cols=149 Identities=11% Similarity=-0.006 Sum_probs=107.7
Q ss_pred HHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHh
Q psy10938 47 LSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFIN 126 (314)
Q Consensus 47 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 126 (314)
+....|.+.+|+|.++.+.|++.+...++..++.++++++.||+|+|+.+..+.+...+..++.++++|++++++.+++.
T Consensus 224 ~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~ 303 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILH 303 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 33445656677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHH
Q psy10938 127 GFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVL 206 (314)
Q Consensus 127 G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 206 (314)
|+..+ --.....+..++.++.. ....+........+++..+++.++|++.|++|. ........+
T Consensus 304 g~~~~-------~~~~~~~~~i~~~~~~~--------~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~ 367 (382)
T TIGR00902 304 CGTFA-------VCHLAAMRYIAAQPGSE--------IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAII 367 (382)
T ss_pred HHHHH-------HHHHHHHHHHHhCCHhh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHH
Confidence 99887 11111111111111000 011122223345678899999999999999986 444444444
Q ss_pred HHHHH
Q psy10938 207 SSGVA 211 (314)
Q Consensus 207 ~~~~~ 211 (314)
..+++
T Consensus 368 ~~~~~ 372 (382)
T TIGR00902 368 AAAAF 372 (382)
T ss_pred HHHHH
Confidence 44443
No 160
>PRK12382 putative transporter; Provisional
Probab=99.22 E-value=2.4e-10 Score=100.56 Aligned_cols=124 Identities=12% Similarity=-0.090 Sum_probs=98.1
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---Hh-----cchhHHHHHHHHHHHhhh
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY---YV-----QTSTQNLILSCIFEALTG 235 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~ 235 (314)
.+..+.+...+...+...+++++.|+++||+|||+.+..+.+...++.+... .. ++.+..++..++.+.+.+
T Consensus 48 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 127 (392)
T PRK12382 48 FGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGES 127 (392)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999999999999999999888776665443221 11 233444555566777777
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHH
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLIL 287 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~ 287 (314)
...+...++..|..|+++|+++.++.......|..++|.+.+.+.+..++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 179 (392)
T PRK12382 128 QLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAA 179 (392)
T ss_pred HHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 6677777888899999999999999999889999999999999988777443
No 161
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.22 E-value=2.3e-10 Score=102.06 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=102.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhhhhhchhhe
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKM-GAKWFLVAGLVLSSGVAMALYYVQT-STQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+..+++...........++.+++|+++||+ |||+.+..+.++..++.+++....+ .........+...+.+...+...
T Consensus 43 s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~ 122 (493)
T PRK15462 43 DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVS 122 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHH
Confidence 455677777788888889999999999999 9999999999888888766554322 12222222333345555566677
Q ss_pred eeecccccch--hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH
Q psy10938 243 CIMVDLFPTN--LRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFS 302 (314)
Q Consensus 243 ~~~~~~~p~~--~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~ 302 (314)
++..|.+|++ .|.++.++.+...++|+.++|.+.|.+.+..+ ...|.+.++..+++.+..
T Consensus 123 alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 123 CLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 8899999875 68999999999999999999999999998877 455666555444444433
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.22 E-value=5.8e-10 Score=100.54 Aligned_cols=145 Identities=14% Similarity=0.174 Sum_probs=109.5
Q ss_pred cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhch
Q psy10938 160 TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
+..+.+..+.+...+...++..++.++.|++.||+|||+++..+.++.++..++..+.++.+..++..++.+++.+...
T Consensus 64 ~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~- 142 (476)
T PLN00028 64 DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV- 142 (476)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-
Confidence 3456667777777888888899999999999999999999998888888888877777777766666666676655433
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh---------hh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG---------HC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~---------~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
....++.|.+|++.|+++.|+.+...++|..+++.+.+.+.+. .+ ...|++.+++.++..+...++
T Consensus 143 ~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 143 SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445788999999999999999988888888887777655431 23 456667676666655555444
No 163
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.22 E-value=1.6e-10 Score=101.84 Aligned_cols=123 Identities=10% Similarity=-0.162 Sum_probs=98.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---c-----chhHHHHHHHHHHHhhhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV---Q-----TSTQNLILSCIFEALTGC 236 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~ 236 (314)
+..+.+...+...++..++.++.|+++||+|||+++..+..+.++..+...+. + +.+..+...++.+.+.+.
T Consensus 49 s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 128 (399)
T PRK05122 49 SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESL 128 (399)
T ss_pred cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHh
Confidence 56678888999999999999999999999999999999887776654443322 2 122344555677777777
Q ss_pred hchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHH
Q psy10938 237 CISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLIL 287 (314)
Q Consensus 237 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~ 287 (314)
..+....+..|..|+++|+++.++......+|..++|.+.+.+.+..++..
T Consensus 129 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~ 179 (399)
T PRK05122 129 AGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAG 179 (399)
T ss_pred hcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHH
Confidence 778778888999999999999999998889999999999999998877443
No 164
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.21 E-value=4.8e-10 Score=98.24 Aligned_cols=119 Identities=10% Similarity=-0.073 Sum_probs=104.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..+..+...+.++.+..+...++.+++.+...+.....
T Consensus 39 s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 118 (381)
T PRK03633 39 PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESA 118 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56688899999999999999999999999999999999999998888888888888777777778888877777777777
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
..+..++++|+++.+..+...++|..++|.+.+.+.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 119 LMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 778888899999999999999999999999999887754
No 165
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.21 E-value=2e-10 Score=100.01 Aligned_cols=138 Identities=14% Similarity=0.059 Sum_probs=111.8
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+..+.+...+...++..++.+..|.+.||+|||+.+..+..+.+++.+...+.++.+..+....+.+++.+..++.....
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 115 (377)
T TIGR00890 36 GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNT 115 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHH
Confidence 56778889999999999999999999999999999999999999988888888887777777777777777776666677
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 303 (314)
..|.+| ++|+++.++......+|..+++++.+.+.+..+ ...+++.+++.++..+..+
T Consensus 116 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 116 AVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 777776 579999999999999998887777777777665 4566666666655554443
No 166
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=2.6e-10 Score=102.51 Aligned_cols=144 Identities=15% Similarity=-0.003 Sum_probs=113.0
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcch---hHHHHHHHHHHHhhhhhchhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTS---TQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 241 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.++..+..+. +..++..++.+++.+...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 148 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV 148 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHH
Confidence 46678888999999999999999999999999999999888888877777554432 356666777888888888888
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH---HHHHhhhh-HHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF---GFLIDGHC-LILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~---g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
..++.|.+|+++|+++.++.+....+|..++|.+. +...+..+ ...+++.+...++..+...++||+
T Consensus 149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~ 219 (481)
T TIGR00879 149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPES 219 (481)
T ss_pred HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999998 54445445 445555444444444444555664
No 167
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.20 E-value=4.8e-10 Score=99.05 Aligned_cols=138 Identities=21% Similarity=0.114 Sum_probs=108.0
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccc
Q psy10938 169 VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDL 248 (314)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
.+...+...+...++.++.|+++||+|||+.+..+.....++.++..+.++.+..++..++.+++. ...+.......+.
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~ 134 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLG-GFVPNANALIATQ 134 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHh
Confidence 466777888889999999999999999999999988888888877777767666666666666543 3456666788889
Q ss_pred ccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hccc
Q psy10938 249 FPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPA 307 (314)
Q Consensus 249 ~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ 307 (314)
.|+++|+++.++.+....+|..++|.+.+.+.+..+ ...+++.+.+.++..+... +.+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (408)
T PRK09874 135 VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRE 195 (408)
T ss_pred cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999988776 4556666666555555443 3344
No 168
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.20 E-value=4.5e-10 Score=98.04 Aligned_cols=144 Identities=12% Similarity=0.099 Sum_probs=103.8
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHH-HHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVA-GLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
+..+.+...+...+...+..++.|.++||+|||+.+.. +.....++.++..+.++.+..+....+.+.+.+...|....
T Consensus 31 s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~ 110 (375)
T TIGR00899 31 RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFA 110 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 56678888888888888889999999999998876554 45555555566666666665555445555555566677777
Q ss_pred eecccccchhhHHH--HHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh-cccC
Q psy10938 244 IMVDLFPTNLRVLA--AALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF-LPAT 308 (314)
Q Consensus 244 ~~~~~~p~~~r~~~--~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~ 308 (314)
+..|..|++.|+.+ .+.......+|..++|.+.+.+.+..+ ...+++.+.+.++..+...+ +||.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 179 (375)
T TIGR00899 111 LAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSY 179 (375)
T ss_pred HHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 77888777666644 577778888999999999999998876 55677767666665555443 5654
No 169
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.19 E-value=5.8e-10 Score=97.31 Aligned_cols=146 Identities=14% Similarity=0.085 Sum_probs=122.6
Q ss_pred ccCCCChh-HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhch
Q psy10938 161 CSGEVNPE-VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
..+.+..+ .+.+...+..+..+..+.+|+++||+|.|+++..+.+.-.+..++..+..+...+.+.-++.|++.+..+
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~- 133 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI- 133 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 34556667 8888999999999999999999999999999999999999999999998888888889999999999999
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHhcccC
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLI----LICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
....++.+.+|+++|+++.|+.+....+|.++++++.+.+. ..++. ..++......++.++.+++|..
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88999999999999999999999999999999999999844 44422 2334444455556667777743
No 170
>PRK11462 putative transporter; Provisional
Probab=99.19 E-value=1.6e-09 Score=97.15 Aligned_cols=233 Identities=12% Similarity=0.016 Sum_probs=136.8
Q ss_pred ccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc----cchhHHH-HHHHHHHHHHhHHHHhhhH------HHHH
Q psy10938 51 LPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT----QGRKITL-IGALLVDGLCGIASSVAQY------YGVF 119 (314)
Q Consensus 51 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l-~~~~~~~~~~~~~~~~~~~------~~~l 119 (314)
...+.+..|+++..+|.+..+.-+.-++..|+.|.++|| +||||.. +.+....+++.++....|+ ...+
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 444556789999999999999999999999999999995 7887654 5676777777666554442 2334
Q ss_pred HHHHHHhhcccC----C---------------------------------------C-----------------------
Q psy10938 120 LALRFINGFASR----P---------------------------------------L----------------------- 133 (314)
Q Consensus 120 ~~~r~l~G~~~~----P---------------------------------------l----------------------- 133 (314)
.+.-++..++.. | +
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 444444444443 2 0
Q ss_pred ------------CCCC-cc-cchhhhhhh----cCCcCCCcCcc-------------------cccCCCChhHHHHHHHH
Q psy10938 134 ------------IPGH-PG-KVASVCDVS----ALQPADNSTVA-------------------TCSGEVNPEVFSHTLII 176 (314)
Q Consensus 134 ------------~~~~-~~-~~~~~~~~~----~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 176 (314)
+++. ++ ++.+..+.. ++++.+..... .................
T Consensus 193 ~~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~ 272 (460)
T PRK11462 193 AFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTY 272 (460)
T ss_pred HHHHHHHHHhcceeccCCCccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHH
Confidence 1100 00 000011111 11100000000 11111222233445566
Q ss_pred HhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHHHHhhhhhchhheeeeccccc----
Q psy10938 177 GLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTS--TQNLILSCIFEALTGCCISVVYCIMVDLFP---- 250 (314)
Q Consensus 177 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 250 (314)
.+..+++..+++++.||+++|+.......+..+..+++.+.++. .......++.+++.+...+..++..+|..+
T Consensus 273 ~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~ 352 (460)
T PRK11462 273 CVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW 352 (460)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 77888899999999999999988765554444433333333332 223333444555555555555666776654
Q ss_pred ---chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 251 ---TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 251 ---~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.+..|...+.......+|..+++.+.|.+.+..
T Consensus 353 ~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~ 388 (460)
T PRK11462 353 CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG 388 (460)
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 233355567777888899999999999988753
No 171
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.19 E-value=5.6e-10 Score=97.11 Aligned_cols=116 Identities=16% Similarity=0.183 Sum_probs=97.5
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHhhhhhchhhee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-TSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
+..+.++......++..++.++.|++.||+|||+.+..+..+..++.++..+.+ +.+...+..++.+++. ...+....
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~ 113 (366)
T TIGR00886 35 STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMP 113 (366)
T ss_pred CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHH
Confidence 566778888899999999999999999999999999999999999888888877 7666666666666653 34455677
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
++.|.+|+++|+++.++.....++|..+++.+.+.+.+
T Consensus 114 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 114 WISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 89999999999999999998888888888888877765
No 172
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.18 E-value=5.5e-10 Score=98.27 Aligned_cols=152 Identities=11% Similarity=0.007 Sum_probs=105.6
Q ss_pred hcc-ccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhc
Q psy10938 50 VLP-SAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGF 128 (314)
Q Consensus 50 ~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 128 (314)
..| .+++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+........++++.+++.+++.++
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 317 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAI 317 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 344 3456789999999999888888888999999999999999998887776666555555567788888888887776
Q ss_pred ccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHH
Q psy10938 129 ASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSS 208 (314)
Q Consensus 129 ~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 208 (314)
+.+ -..........+..+++ .....+.......++..+++.++|.+.|++|.+..+........
T Consensus 318 ~~g---~~~~~~~~~~~~~~p~~-------------~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~ 381 (393)
T PRK15011 318 YIG---ILGGIGMLYFQDLMPGQ-------------AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMII 381 (393)
T ss_pred HHH---HHHHHHHHHHHHhCCCC-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 554 00000001111222111 23344455556778899999999999999998888777776666
Q ss_pred HHHHHHHHh
Q psy10938 209 GVAMALYYV 217 (314)
Q Consensus 209 ~~~~~~~~~ 217 (314)
++++...+.
T Consensus 382 ~~~~~~~~~ 390 (393)
T PRK15011 382 ATLFCLLRI 390 (393)
T ss_pred HHHHHHHhh
Confidence 666655544
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.18 E-value=1e-09 Score=96.98 Aligned_cols=119 Identities=12% Similarity=0.098 Sum_probs=99.8
Q ss_pred ccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHhhh
Q psy10938 161 CSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV-----QTSTQNLILSCIFEALTG 235 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 235 (314)
..+.+..+.+...++..+...+.++..|++.||+|.|++...+..+..+..+...+. ++.+..++..++.+++ +
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 567788889999999999999999999999999999999999988888888877765 5666777777777775 6
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
..++.....+.+.+|+++||++.|+....+++|..+++++.+.+.
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 678888889999999999999999998778888877766665543
No 174
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.18 E-value=5.1e-10 Score=101.31 Aligned_cols=136 Identities=13% Similarity=0.013 Sum_probs=104.4
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhH--------HHHHHHHHHHhhhhhchhheee
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQ--------NLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.+...++..+|.++.|++.||+|||+++..+.++.+++.++..+.++... ....-++.|++.+..++....+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 45666788899999999999999999999999999999999988887643 4556677888889999999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh--------hhh-HHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID--------GHC-LILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
+.|.+|+++|++..++......+|..+++.+...+.. ..+ ...|++.+.+.+++.++...+||+
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~es 215 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEET 215 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999888777888887766544432 334 445655444444433333345664
No 175
>KOG1330|consensus
Probab=99.17 E-value=7e-12 Score=107.20 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=128.8
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhh
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.+.++...+++.....+...+..++.|++.||++|++++..+..+-.++.+...+..+.|...+.-.+.|++.....|..
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia 142 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIA 142 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccc
Confidence 34467778888999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHhc-ccCC
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--LILICTLAAMLLIAGVFSMFL-PATG 309 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~ 309 (314)
+++++|.+|.++|++++++.+....+|+.+|-+.++.+.+..+ ...+...+++.++.+++..+. +|.+
T Consensus 143 ~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 143 PSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999999999888888887765 445667777777777665544 4443
No 176
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=5e-10 Score=100.39 Aligned_cols=140 Identities=15% Similarity=0.069 Sum_probs=106.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH-HHHHHhhhhhchhhee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILS-CIFEALTGCCISVVYC 243 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 243 (314)
+..+.+...+...+...++.++.|+++||+|||+.+..+.++..+..++..+.++.+..+... ++.+++.+...+....
T Consensus 52 s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~ 131 (455)
T TIGR00892 52 TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLT 131 (455)
T ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 445566667777777788888999999999999999998888888887777776666554433 4556666655555566
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
.+.+.+| ++|+++.|+.+....+|..++|.+.+.+.+..+ ...|++.+++.+++.+..+++
T Consensus 132 ~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 132 MLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 7778885 789999999999999999999999999999877 566777777666555444333
No 177
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.17 E-value=6.1e-10 Score=99.25 Aligned_cols=137 Identities=12% Similarity=-0.050 Sum_probs=102.1
Q ss_pred HHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchh--------HHHHHHHHHHHhhhhhchhhee
Q psy10938 172 HTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTST--------QNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
......++..++.++.|++.||+|||+.+..+..+..++.+...+.++.. .....-++.|++.+..++...+
T Consensus 68 ~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~ 147 (432)
T PRK10406 68 VFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT 147 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH
Confidence 34455566679999999999999999999999999998888887776542 3555667788888889999999
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh--------hhh-HHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID--------GHC-LILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
++.|.+|+++|++..++.+.....|..+++.+...+.. ..+ ...|++.++..++...+...+||+
T Consensus 148 ~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~ 221 (432)
T PRK10406 148 YMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDET 221 (432)
T ss_pred HHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999998887777887877776554432 334 455666555555443333334554
No 178
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.17 E-value=8.1e-10 Score=97.50 Aligned_cols=120 Identities=13% Similarity=-0.011 Sum_probs=95.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---Hh-cchhHHHHHHHHHHHhhhhhchh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY---YV-QTSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
+..+.+...+...++..++.++.|++.||+|||+.+..+..+..++.++.. .. ++.+..+....+.+++.+...+.
T Consensus 46 s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~ 125 (402)
T TIGR00897 46 SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYS 125 (402)
T ss_pred CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhH
Confidence 566788888999999999999999999999999999988888877765432 22 24444445555556666656666
Q ss_pred heeeecccccchhhHHHHHHHHhhhhhhh-hhHHHHHHHHHhhhh
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSSTFGRFGG-LTGNLMFGFLIDGHC 284 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~~~~~~g~-~~~p~~~g~l~~~~~ 284 (314)
......+.+|+++|+++.|+.+....+|. .++|.+.+.+.+..+
T Consensus 126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 126 FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 66778888999999999999999999986 589999999888766
No 179
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.16 E-value=1.8e-08 Score=87.69 Aligned_cols=251 Identities=13% Similarity=0.054 Sum_probs=164.5
Q ss_pred ccccccccchhhHHhHhhHHHHHHhhhhhhhcccc-cchhHHHHHHHHHHHHHhHHHHhhh--HHHHHHHHHHHhhcccC
Q psy10938 55 QCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT-QGRKITLIGALLVDGLCGIASSVAQ--YYGVFLALRFINGFASR 131 (314)
Q Consensus 55 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~ 131 (314)
.+.+|.|+++..-+.+.|..-.-+..+++|+++|| +|+|+.+..+.++..+|.++.+.+. +...+.++-.+.++|.|
T Consensus 53 ~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~G 132 (498)
T COG3104 53 GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTG 132 (498)
T ss_pred cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccc
Confidence 33355999999888888888888899999999999 7999999999999999999999884 78889999999999999
Q ss_pred ---C-------------------------------------------------------------------C--------
Q psy10938 132 ---P-------------------------------------------------------------------L-------- 133 (314)
Q Consensus 132 ---P-------------------------------------------------------------------l-------- 133 (314)
| +
T Consensus 133 l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 133 LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 1 0
Q ss_pred ---CCCCcccchh-----------------------------------------hhhhhcCCcCCCcCcc----------
Q psy10938 134 ---IPGHPGKVAS-----------------------------------------VCDVSALQPADNSTVA---------- 159 (314)
Q Consensus 134 ---~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~---------- 159 (314)
++..+..... ..+..+.++..+.+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~ 292 (498)
T COG3104 213 GGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLF 292 (498)
T ss_pred CCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000010000000
Q ss_pred ----------------------cccC--CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH-------HHHHHHHHHHH
Q psy10938 160 ----------------------TCSG--EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK-------WFLVAGLVLSS 208 (314)
Q Consensus 160 ----------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~ 208 (314)
.+++ .......+..++..+.-++..++..++..|.+++ .-+..+..+++
T Consensus 293 ~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g 372 (498)
T COG3104 293 AVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAG 372 (498)
T ss_pred HHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHH
Confidence 0111 1234556667777777777777777777774432 23445566666
Q ss_pred HHHHHHHHh----------cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHH
Q psy10938 209 GVAMALYYV----------QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGF 278 (314)
Q Consensus 209 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~ 278 (314)
.+++++... .+.++.+...++..++.-...|+..+++..+.|++..+..++........++.++..+.+.
T Consensus 373 ~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 373 LGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence 666555443 1345566677778889999999999999999999999999998888777777777766652
Q ss_pred ------HHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 279 ------LIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 279 ------l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
..+... ...|+..+...++..+....+
T Consensus 453 ~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 453 TAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred ccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 222222 445666666665555554433
No 180
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.15 E-value=3.2e-10 Score=101.19 Aligned_cols=143 Identities=17% Similarity=0.140 Sum_probs=108.4
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHhhhhhchh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ----TSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
+..+.++..+...++..++.+..|++.||+|||+.+..+.++.+++.+.....+ +.+......++.+++.+..++.
T Consensus 59 s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~ 138 (438)
T TIGR00712 59 SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPP 138 (438)
T ss_pred CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHH
Confidence 456678888899999999999999999999999998888888877777665442 2333344455667777777777
Q ss_pred heeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh-hh-HHHHHHHHHHHHHHHHHH-Hhccc
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG-HC-LILICTLAAMLLIAGVFS-MFLPA 307 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~-~~-~~~~~~~~~~~~~~~~~~-~~~~~ 307 (314)
....+.|.+|+++|+++.|+.+....+|+.++|.+.+...+. .+ ...+++.+++.++..+.. .++||
T Consensus 139 ~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 139 CGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 778889999999999999999999999999999888765553 34 456666666666654443 34454
No 181
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.15 E-value=1.8e-09 Score=95.35 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=100.8
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHhhhhhchhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV---QTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
+..+.+...+...++..++.+..|++.||+|||+.+..+..+.+++.++.... ++.+......++.+.+.+...+..
T Consensus 36 s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~ 115 (410)
T TIGR00885 36 TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAA 115 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhh
Confidence 56778889999999999999999999999999999999999988887775433 345556666777888888888888
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
+.++.+..|+++|++..++.+....+|..++|.+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 116 NPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred hHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999998885
No 182
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.14 E-value=3e-09 Score=89.20 Aligned_cols=223 Identities=19% Similarity=0.143 Sum_probs=132.5
Q ss_pred HHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHh
Q psy10938 47 LSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFIN 126 (314)
Q Consensus 47 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 126 (314)
.+|..-.+-+++|.++.|++.+....+....+..++.|.++||+|||+.-+..+++.+++.+ .-..++++.++++|++.
T Consensus 53 QGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlg 131 (354)
T PF05631_consen 53 QGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLG 131 (354)
T ss_pred hcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHH
Confidence 34443344468999999999999999999999999999999999999999999999988875 55678999999999999
Q ss_pred hcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHH-HHHHhhhhhHHhHHHHHHHHhh--hHHHHHHH
Q psy10938 127 GFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHT-LIIGLACIPSSLAMPLLVHKMG--AKWFLVAG 203 (314)
Q Consensus 127 G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~ 203 (314)
|++.+=|. ..-+.+--..+++..- ..+.....-.... ...++..+.+.+++-+++|+.+ ++.....+
T Consensus 132 GiaTSLLf----S~FEsW~V~Eh~~~g~------~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a 201 (354)
T PF05631_consen 132 GIATSLLF----SAFESWMVHEHNKRGF------PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAA 201 (354)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHcCC------ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHH
Confidence 99987000 0000000000000000 0000111222222 2345566777777778888775 46667766
Q ss_pred HHHHHHHHHHHHHh--cch-----------------------hHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHH
Q psy10938 204 LVLSSGVAMALYYV--QTS-----------------------TQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAA 258 (314)
Q Consensus 204 ~~~~~~~~~~~~~~--~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~ 258 (314)
..+..++.++.... .|. ...+.+..+-..+.+..+.-...+.+-+-|. .+..=.
T Consensus 202 ~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~-~~~~P~ 280 (354)
T PF05631_consen 202 IVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD-DEELPL 280 (354)
T ss_pred HHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC-CCCCCc
Confidence 66666666554321 110 1122233333445555544444444443332 122335
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 259 ALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 259 g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
|+..........+|+.+...+.+
T Consensus 281 GlIFssFM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 281 GLIFSSFMVAMMLGSSLFSRLLS 303 (354)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh
Confidence 55555555556666666655544
No 183
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.14 E-value=8.4e-10 Score=99.48 Aligned_cols=132 Identities=11% Similarity=-0.021 Sum_probs=101.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhcchhH-HHHHHHHHHHhhhhhchhhe
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHK-MGAKWFLVAGLVLSSGVAMALYYVQTSTQ-NLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (314)
+..++......+........+++|+++|| +|||+++..+.++..++.+...+..+... .++...+.+.+.+...+...
T Consensus 48 ~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~ 127 (489)
T PRK10207 48 SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPA 127 (489)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHH
Confidence 34445555666666666677899999999 99999999999999998888777654333 33445556777888888889
Q ss_pred eeecccccch--hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhH-HHHHHHHHHHH
Q psy10938 243 CIMVDLFPTN--LRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCL-ILICTLAAMLL 296 (314)
Q Consensus 243 ~~~~~~~p~~--~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~-~~~~~~~~~~~ 296 (314)
+.+.|.+|++ .|++++++.+...++|..++|.+.|++.++.++ ..|++.++..+
T Consensus 128 ~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 128 SLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred HHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 9999999877 457789999999999999999999999998874 45555443333
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=2e-09 Score=93.37 Aligned_cols=120 Identities=14% Similarity=0.007 Sum_probs=98.2
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhh
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.+.+..+.+...+...++..++.+..|++.||+|||+.+..+.++..++.+.. ..++.+..+...++.+++.+...+..
T Consensus 30 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~ 108 (355)
T TIGR00896 30 LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLL 108 (355)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccc
Confidence 34567788999999999999999999999999999999988887777666655 55666666666666777776666666
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.....|.+| ++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 109 ~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 109 PSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred hHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677788776 67999999999999999999999999888764
No 185
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.11 E-value=2.7e-10 Score=102.49 Aligned_cols=139 Identities=12% Similarity=0.019 Sum_probs=109.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----hcchhHHHHHHHHHHHhhhhhch
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYY-----VQTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
+..+.++..+.+.++..++.++.|+++||+|+|+++..+.++.++..+.... .++.+..+...++.+++.+...+
T Consensus 62 s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 141 (467)
T PRK09556 62 STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGP 141 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccch
Confidence 5667888888899999999999999999999999998887777766655544 35666666777778888888888
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh---h-HHHHHHHHHHHHHHHHHHH
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH---C-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~---~-~~~~~~~~~~~~~~~~~~~ 303 (314)
....++.|.+|+++|+++.|+.+....+|.++++.+...+.+.. + ...+.+.+++.++..++.+
T Consensus 142 ~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 142 CSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred HHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999887776643 2 2344554555544444433
No 186
>KOG0255|consensus
Probab=99.11 E-value=1.6e-09 Score=98.94 Aligned_cols=143 Identities=16% Similarity=0.124 Sum_probs=119.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
+........+++.++..+|+++.|.++||+|||+++..+..+..++.+...+.++.+...+.-++.|++.++...+.+.+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 44566677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcccCC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLPATG 309 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (314)
..|.++++.|+.+..+ ......++..+|...+++.+. ....+++..+...+..+..++.+|.+
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~-Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD-WRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 9999999999999999 888888899999999888883 23344444444444434433334643
No 187
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.10 E-value=9.5e-10 Score=97.66 Aligned_cols=142 Identities=13% Similarity=-0.023 Sum_probs=100.6
Q ss_pred cccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCCCC
Q psy10938 56 CDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPLIP 135 (314)
Q Consensus 56 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl~~ 135 (314)
++.+.+..+.|++.++..++..++++++|++.||+|||+.+..+..+.+++.++.++++|++.+++.+++.|++.+ -
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~---~ 331 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVP---F 331 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH---H
Confidence 3346677788999999999999999999999999999999999999999998888899999999999999998775 0
Q ss_pred CCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy10938 136 GHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVA 211 (314)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 211 (314)
-.........+..+.+. + .............++.++++.+.|++.|.+|.+..+.....+..+..
T Consensus 332 ~~~~~~~~~~~~~~~~~-~----------a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~ 396 (420)
T PRK09528 332 LLVGVFKYITLNFDVRL-S----------ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFT 396 (420)
T ss_pred HHHHHHHHHHHHcCccc-e----------eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Confidence 00000011111111110 0 11111113445668888999999999999998877766555544433
No 188
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.09 E-value=1.8e-09 Score=96.73 Aligned_cols=144 Identities=16% Similarity=0.085 Sum_probs=103.9
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHhhhhhchh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ----TSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
+..+.+...+...++..++.++.|+++||+|||+++..+.++.++..+...+.+ +.+..+...++.+++.+...+.
T Consensus 61 s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~ 140 (452)
T PRK11273 61 SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPP 140 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchH
Confidence 456788888899999999999999999999999999999888888877776643 3344455556677777777777
Q ss_pred heeeecccccchhhHHHHHHHHhhhhhhhhh-HHHHHHHHHhhhh-HHHHHHHHHHHHHHHHH-HHhcccC
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSSTFGRFGGLT-GNLMFGFLIDGHC-LILICTLAAMLLIAGVF-SMFLPAT 308 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~-~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 308 (314)
......|.+|+++|+++.|+.+....+|+.+ +|.+...+....+ ...+++.+.+.++..++ .+++||+
T Consensus 141 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 141 CGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 7777889999999999999999998888754 4544323322223 44566655555554433 3444543
No 189
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.08 E-value=3.5e-09 Score=95.64 Aligned_cols=141 Identities=18% Similarity=0.084 Sum_probs=112.0
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHhhhhhch
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV-----QTSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
++...++......+-.++..+++|.++||++||+++..+-.+.++..+.+... .+.+..+.+.++.+.+.....|
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~P 122 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNP 122 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 55667777788888888899999999999999999998887776554443322 2556677777888888888899
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
..++.++|++|+++...+.++.+...++...+||.++|.+....| ...|.+-++..++........
T Consensus 123 A~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 123 AWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999888 455655555554444333333
No 190
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.07 E-value=7.4e-10 Score=82.14 Aligned_cols=133 Identities=20% Similarity=0.168 Sum_probs=97.7
Q ss_pred HHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCCCCCCcccchhhhh
Q psy10938 67 WLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPLIPGHPGKVASVCD 146 (314)
Q Consensus 67 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~ 146 (314)
++.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+ ...+.......|
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~ 78 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAA---FALVAGAALIAD 78 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH---HHHHhHHHHHHH
Confidence 34567788999999999999999999999999999999999988889999999999999999876 111111111222
Q ss_pred hhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy10938 147 VSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL 214 (314)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 214 (314)
..+++. .....+.......++..++..+.+.+.|..+++...........+..+..
T Consensus 79 ~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 79 IYPPEE------------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HCChhh------------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 222111 23455566677788889999999999999888877666555554444433
No 191
>PRK09952 shikimate transporter; Provisional
Probab=99.07 E-value=3.1e-09 Score=94.88 Aligned_cols=123 Identities=12% Similarity=0.015 Sum_probs=97.2
Q ss_pred HHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchh--------HHHHHHHHHHHhhhhhchhheeeec
Q psy10938 175 IIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTST--------QNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 175 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
...++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.. ..+..-++.+++.+..++....++.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 34466778889999999999999999999999999999988888754 2455567788888888888889999
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh--------hhh-HHHHHHHHHHHHH
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID--------GHC-LILICTLAAMLLI 297 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~--------~~~-~~~~~~~~~~~~~ 297 (314)
|.+|+++|++..+..+....+|..+++.+.+.+.. ..+ ...|++.++..++
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 99999999999999888888888888777766543 234 4456555544433
No 192
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.06 E-value=1.8e-09 Score=94.58 Aligned_cols=131 Identities=12% Similarity=-0.004 Sum_probs=95.5
Q ss_pred ccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhccc
Q psy10938 51 LPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFAS 130 (314)
Q Consensus 51 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 130 (314)
.|.+.+|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+....+++.++..++++++.+++..++.|++.
T Consensus 228 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 307 (382)
T PRK11128 228 SAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTF 307 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34455678999999999999999999999999999999999999999999999998888888999999999999999987
Q ss_pred CCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHH-HHHHhhhhhHHhHHHHHHHHhhhH
Q psy10938 131 RPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHT-LIIGLACIPSSLAMPLLVHKMGAK 197 (314)
Q Consensus 131 ~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~ 197 (314)
+ -......+..++.+.. + .....+... .....+..+|+.++|++.|++|..
T Consensus 308 ~-------~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~ 359 (382)
T PRK11128 308 T-------VCHLAAMRYIAARPGS--------E-VIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG 359 (382)
T ss_pred H-------HHHHHHHHHHHHCCHh--------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 6 1111111111111100 0 111122222 233456678999999999999874
No 193
>KOG2532|consensus
Probab=99.04 E-value=8e-09 Score=91.79 Aligned_cols=143 Identities=14% Similarity=0.070 Sum_probs=126.6
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHhhhhhchh
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ--TSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
..+..+.+.+.+....+.+++.+.++++.||+|-|+++..+.++.++..++..+.. +.+..++.-++.|++.+..+|.
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa 148 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPA 148 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhh
Confidence 44777888999999999999999999999999999999999999999888887654 3446677888899999999999
Q ss_pred heeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh-hh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG-HC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
......+..|+++|++..++.....++|.+++-++.|.+.+. .| ...|++.+++.++..++++++
T Consensus 149 ~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 149 IGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred hhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 66 678888888888877766554
No 194
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.03 E-value=7.7e-09 Score=88.01 Aligned_cols=139 Identities=18% Similarity=0.182 Sum_probs=111.1
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchh---HHHHHHHHHHHhhhhhch
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTST---QNLILSCIFEALTGCCIS 239 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 239 (314)
+.+..+.+++..+..+.+.+.++.-|.+.||+|.|+....+.++..+-++...+..+.+ ..++..++.+ ..++.+.
T Consensus 45 ~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G-~~GasFa 123 (417)
T COG2223 45 GLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG-LAGASFA 123 (417)
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh-cccceeh
Confidence 34778889999999999999999999999999999999999999888888877765444 4444444444 6778888
Q ss_pred hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh---H-HHHHHHHHHHHHHHHHHH
Q psy10938 240 VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC---L-ILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 240 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~---~-~~~~~~~~~~~~~~~~~~ 303 (314)
+...++++.+|+|++|.+.|++. .+|+|..+...+.+.+....+ + ....+.....++..+..+
T Consensus 124 v~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~ 190 (417)
T COG2223 124 VGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAW 190 (417)
T ss_pred cccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999998888766 2 234444555555444443
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.03 E-value=4.7e-09 Score=104.78 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=96.7
Q ss_pred hhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---HhcchhHHHHHHHHHHHhhhhhchhhee
Q psy10938 167 PEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY---YVQTSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
...++..+++.++..++.+++|+++||+|||+++..+..+..+..++.. ...+.+..++..++.+++.+...+...+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 3456777888888999999999999999999999887766554444332 2345666677777788888888899999
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG 282 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~ 282 (314)
++.|.+|++.|+++.|+......+|.+++|.+++.+.+.
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999876
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.03 E-value=4.7e-09 Score=104.66 Aligned_cols=141 Identities=13% Similarity=0.080 Sum_probs=104.2
Q ss_pred hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHH--HHHHHHHH-HHhcchhHHHHHHHHHHHhhhhhchhheee
Q psy10938 168 EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVL--SSGVAMAL-YYVQTSTQNLILSCIFEALTGCCISVVYCI 244 (314)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
..++..+...+..++..+++|+++||+|||+++...... ........ ...++.+..++..++.+.+.+...|...++
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~ 132 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI 132 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh
Confidence 456667778888889999999999999999875332221 11122222 233677777888888898899999999999
Q ss_pred ecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHHHHhcccC
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLA-AMLLIAGVFSMFLPAT 308 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 308 (314)
+.+.+|++.|++++|+.+....+|.+++|.++|.+.+..++..+++.. .+.+++.++..+++++
T Consensus 133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999999987754443333 3333333344445544
No 197
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.02 E-value=8.4e-09 Score=91.06 Aligned_cols=144 Identities=15% Similarity=0.062 Sum_probs=105.2
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh-----hhHH-HHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHHHh
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM-----GAKW-FLVAGLVLSSGVAMALYYVQT---STQNLILSCIFEAL 233 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 233 (314)
+.+..+.++...+... .+..++.|.++||+ |||+ .+..+..+.+++...+.+.+. .+......++.+++
T Consensus 30 g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~ 107 (402)
T PRK11902 30 GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFL 107 (402)
T ss_pred CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHH
Confidence 4467777777555544 57889999999999 7765 677777777777777666532 33334444455566
Q ss_pred hhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh-h-HHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 234 TGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH-C-LILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
.....+...+++.|.+|+++|+++.++......+|..+++.+.+.+.+.. + ...+++.+++.++..+.....||+
T Consensus 108 ~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~ 184 (402)
T PRK11902 108 SASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 66677788899999999999999999999988999999999999998853 5 556666666665555544455654
No 198
>KOG0254|consensus
Probab=99.00 E-value=9.2e-09 Score=93.67 Aligned_cols=141 Identities=18% Similarity=0.129 Sum_probs=118.8
Q ss_pred hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecc
Q psy10938 168 EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVD 247 (314)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
+.++..+...++..++.++.|+++|++|||+.+..+.+...++.++..+.++.....+.-++.|++.+....+...+.+|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 45788899999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred cccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh--h-HHHHHHHHHHHHHHHHHHHhcccCC
Q psy10938 248 LFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH--C-LILICTLAAMLLIAGVFSMFLPATG 309 (314)
Q Consensus 248 ~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (314)
..|++.||...+..+....+|..++ ++.+...++. + ...+.+..+.+++..+..+++||+.
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999877777 6666666543 3 4455555555555555555667654
No 199
>PRK15075 citrate-proton symporter; Provisional
Probab=99.00 E-value=7.8e-09 Score=92.23 Aligned_cols=103 Identities=11% Similarity=0.091 Sum_probs=85.2
Q ss_pred hhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhH--------HHHHHHHHHHhhhhhchhheeeecccc
Q psy10938 178 LACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQ--------NLILSCIFEALTGCCISVVYCIMVDLF 249 (314)
Q Consensus 178 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
+...++.++.|++.||+|||+.+..+..+..++.++..+.++.+. .++.-++.+++.+...+....+..|.+
T Consensus 67 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 146 (434)
T PRK15075 67 LMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA 146 (434)
T ss_pred HHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC
Confidence 334578899999999999999999999999998888888876542 344556677777777787788999999
Q ss_pred cchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 250 PTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 250 p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
|+++|+++.++.+...++|..+++.+++.+.
T Consensus 147 p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 147 TPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888888888877653
No 200
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.00 E-value=3.4e-09 Score=93.94 Aligned_cols=148 Identities=11% Similarity=-0.031 Sum_probs=98.0
Q ss_pred hhcccccccccccc--------chhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh----HH
Q psy10938 49 FVLPSAQCDFGMTS--------SDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ----YY 116 (314)
Q Consensus 49 ~~~~~~~~~~~~s~--------~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 116 (314)
...|.+.+++|.++ .+.+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 33455555665443 5679999999999999999999999999999999999999988876666532 34
Q ss_pred HHHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHH-HHHHhhhhhHHhHHHHHHHHhh
Q psy10938 117 GVFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHT-LIIGLACIPSSLAMPLLVHKMG 195 (314)
Q Consensus 117 ~~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g 195 (314)
+.+++.+++.|++.+ -..+.......+..+.+. .....+... ....++..+|++++|++.|+.|
T Consensus 309 ~~l~l~~~l~g~~~~---~~~~~~~~~i~~~~p~~~------------~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 309 ALLFLSMIVYGCAFD---FFNISGSVFVEKEVPVHI------------RASAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCHHH------------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 667788999998876 111111111122221111 223344443 4567888999999999999965
Q ss_pred ------hHHHHHHHHHHHHHHH
Q psy10938 196 ------AKWFLVAGLVLSSGVA 211 (314)
Q Consensus 196 ------~~~~~~~~~~~~~~~~ 211 (314)
.+.......++..++.
T Consensus 374 ~~~~~~~~~~f~~~~~~~~i~~ 395 (418)
T TIGR00889 374 AYGTFDWQTMWLFFAGYIAILA 395 (418)
T ss_pred cccCCchHHHHHHHHHHHHHHH
Confidence 5655554444444433
No 201
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.99 E-value=9.4e-09 Score=93.14 Aligned_cols=134 Identities=9% Similarity=-0.027 Sum_probs=95.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHhhhhhchhhe
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHK-MGAKWFLVAGLVLSSGVAMALYYVQTS-TQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+..++...............+++|++.|| +|||+.+..+..+..++..++.+..+. +.......+.+.+.+...+...
T Consensus 55 s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~ 134 (500)
T PRK09584 55 SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPS 134 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHH
Confidence 33444444444444444445689999999 599999999998888887777665433 3333444556667777778778
Q ss_pred eeecccccchh--hHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHH
Q psy10938 243 CIMVDLFPTNL--RVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIA 298 (314)
Q Consensus 243 ~~~~~~~p~~~--r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~ 298 (314)
++..|.+|++. |..+.++.+...++|..++|.+.|++.|..+ ...|.+.++...++
T Consensus 135 ~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 135 SLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 89999997643 4567888899999999999999999999877 44566555444443
No 202
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.98 E-value=1.2e-08 Score=89.49 Aligned_cols=103 Identities=16% Similarity=0.073 Sum_probs=84.5
Q ss_pred hhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchh--------HHHHHHHHHHHhhhhhchhheeeecccc
Q psy10938 178 LACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTST--------QNLILSCIFEALTGCCISVVYCIMVDLF 249 (314)
Q Consensus 178 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
+...++.++.|+++||+|||+.+..+..+..++.++..+.++.. ..+...++.+++.+...+....++.|.+
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 44457889999999999999999999999988888887776643 2344445566667777788888999999
Q ss_pred cchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 250 PTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 250 p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
|+++|++..++.+....+|..++|.+.+.+.
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877654
No 203
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.97 E-value=1.5e-08 Score=87.87 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=98.3
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh-----hhHHHH-HHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHHHh
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM-----GAKWFL-VAGLVLSSGVAMALYYVQT---STQNLILSCIFEAL 233 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 233 (314)
+.+..+.+..... .+...+ .++.|.++||+ |||+.+ ..+.+..+++...+.+.++ .+......++.+.+
T Consensus 19 g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~ 96 (356)
T TIGR00901 19 NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFF 96 (356)
T ss_pred CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHH
Confidence 3455666666543 333333 78999999998 788864 5566666666556555532 22333334445555
Q ss_pred hhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh--------H-HHHHHHHHHHHHHHHHHHh
Q psy10938 234 TGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC--------L-ILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~--------~-~~~~~~~~~~~~~~~~~~~ 304 (314)
.....+...+++.|.+|+++|+.+.++......+|..++|.+.+.+.+..+ + ..+++.++..+++.+...+
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 566667778899999999999999999999999999999999998887755 3 3455666655555444443
Q ss_pred -cccC
Q psy10938 305 -LPAT 308 (314)
Q Consensus 305 -~~~~ 308 (314)
.+|.
T Consensus 177 ~~~e~ 181 (356)
T TIGR00901 177 LAKEP 181 (356)
T ss_pred hccCC
Confidence 3554
No 204
>PRK10133 L-fucose transporter; Provisional
Probab=98.95 E-value=4.5e-08 Score=87.32 Aligned_cols=121 Identities=19% Similarity=0.120 Sum_probs=102.8
Q ss_pred cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHhcchhHHHHHHHHHHHhhhh
Q psy10938 160 TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL---YYVQTSTQNLILSCIFEALTGC 236 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
+..+.+..+.++....+.++..++.+..|.+.||+|||+++..+..+..++.++. .+.++.+..+...++.+.+.+.
T Consensus 54 ~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~ 133 (438)
T PRK10133 54 QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGC 133 (438)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4556678889999999999999999999999999999999999999988888764 3455666677777888888888
Q ss_pred hchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 237 CISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 237 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
..+..+.++.|..|++.|....++.+....+|..++|.+++.+.
T Consensus 134 ~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 134 LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888877777777899999999999999999987654
No 205
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.95 E-value=1.9e-08 Score=88.58 Aligned_cols=142 Identities=13% Similarity=-0.034 Sum_probs=101.1
Q ss_pred cccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCCCCCC
Q psy10938 58 FGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPLIPGH 137 (314)
Q Consensus 58 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl~~~~ 137 (314)
.+.+..+.|.+.+...+...++.+..|++.||+|||+.+.++..+.++...+...++|.+.+++.+++.|++..
T Consensus 249 ~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~------ 322 (396)
T TIGR00882 249 PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVP------ 322 (396)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH------
Confidence 35566678999999999999999999999999999999999999989888887888999999999999998764
Q ss_pred cccchhhhhhhcCCcCCCcCcccccCCCCh-hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy10938 138 PGKVASVCDVSALQPADNSTVATCSGEVNP-EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL 214 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 214 (314)
.......+..+....++ .... ..........++..++.++.|++.|.+|.+..+....++..+..+.-
T Consensus 323 -~~~~~~~~~~~~~~~~~--------~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 323 -FLLVGCFKYITSQFDVR--------LSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred -HHHHHHHHHHHHhCCcc--------eEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 11111111111100000 0111 11223467788999999999999999998777766665555544443
No 206
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.95 E-value=2e-09 Score=99.81 Aligned_cols=143 Identities=10% Similarity=0.015 Sum_probs=112.6
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc--------------------------
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-------------------------- 218 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 218 (314)
+..+.+.+.+.+.++..++.++.+++.||.+||+.+.++.++.+++.++..+.+
T Consensus 66 ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c 145 (633)
T TIGR00805 66 STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLC 145 (633)
T ss_pred CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccc
Confidence 455677778888889999999999999999999999999999888888775542
Q ss_pred -------------------------chhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHH
Q psy10938 219 -------------------------TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGN 273 (314)
Q Consensus 219 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p 273 (314)
....+++.-++.|++.+..++...+++.|.+|++.|+...|+.+....+|..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~ 225 (633)
T TIGR00805 146 MENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGY 225 (633)
T ss_pred cCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHH
Confidence 0122345667788888888899999999999999999999999999999999999
Q ss_pred HHHHHHHhhh---------------------h--HHHHHHHHHHHHHHHHHHHhccc
Q psy10938 274 LMFGFLIDGH---------------------C--LILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 274 ~~~g~l~~~~---------------------~--~~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
.++|.+.+.+ | +..|++.+++.++.++..+++|+
T Consensus 226 llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 226 LLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999988642 1 33466666666665555555554
No 207
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.93 E-value=2.9e-09 Score=70.18 Aligned_cols=81 Identities=25% Similarity=0.356 Sum_probs=76.1
Q ss_pred HHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHH
Q psy10938 40 AAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVF 119 (314)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 119 (314)
.+..++.+.|++|.+++|.++|.++.|++.+..++||.+|++...++.++..+++.+..+++...+..+.+++.++++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999888765
Q ss_pred H
Q psy10938 120 L 120 (314)
Q Consensus 120 ~ 120 (314)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 4
No 208
>KOG2816|consensus
Probab=98.91 E-value=2.4e-07 Score=82.18 Aligned_cols=120 Identities=15% Similarity=0.169 Sum_probs=98.8
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhh
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMP-LLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
+....+.+.+.+..+....++.++.. .+...++.|+.+..+.....+......+..+.|..+..... ........+..
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~-~~~~~~~~pa~ 351 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV-VALAGIVFPAI 351 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH-HHhhcchhHHH
Confidence 45566677677777777778777776 78888899998889999999999999998888776655444 44677778888
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.+..+...+++++|++.++...+..+...++|.+.+.+...+
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 899999999999999999999999999999999999887653
No 209
>PTZ00207 hypothetical protein; Provisional
Probab=98.86 E-value=8.4e-08 Score=87.36 Aligned_cols=120 Identities=13% Similarity=0.197 Sum_probs=87.7
Q ss_pred hHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh------cchhHHHHHHHHHHHhhhhhchhheeeecccccchhhH
Q psy10938 182 PSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV------QTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRV 255 (314)
Q Consensus 182 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~ 255 (314)
...+..|++.||+|+|+++.++.++..++.++..+. ++.+...+..++.+.+.+...+.....+.+.+| ++||
T Consensus 76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG 154 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRG 154 (591)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhH
Confidence 355678999999999999999999999998888776 455666666667777777677777777888886 7899
Q ss_pred HHHHHHHhhhhhhhhh-HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q psy10938 256 LAAALSSTFGRFGGLT-GNLMFGFLIDGHCLILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 256 ~~~g~~~~~~~~g~~~-~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 303 (314)
++.|+......+|+++ +++..+.+.+. ....+++.+++.++..++..
T Consensus 155 ~a~Gi~~~~~gLGsaI~~~l~~~l~~~~-~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 155 AVVAIMKTFTGLGSAILGSIQLAFFSDN-TSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 55555444433 23445555555544444433
No 210
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.84 E-value=9.4e-08 Score=86.54 Aligned_cols=127 Identities=17% Similarity=0.112 Sum_probs=96.2
Q ss_pred hHHhHHHHHHHHh-----hhHHH-HHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHHhhhhhchhheeeecccccch
Q psy10938 182 PSSLAMPLLVHKM-----GAKWF-LVAGLVLSSGVAMALYYVQ---TSTQNLILSCIFEALTGCCISVVYCIMVDLFPTN 252 (314)
Q Consensus 182 ~~~~~~g~l~d~~-----g~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 252 (314)
.+.++.+.++||+ |||+. +..+.+..+++...+.+.+ +.+......++.+++.....+...++..|.+|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5789999999999 88875 5566666666666665543 3334444555666677777777889999999999
Q ss_pred hhHHHHHHHHhhhhhhhhhHHHHHHHHHhh-hh-HHHHHHHHHHHHHHHHHHHhcccC
Q psy10938 253 LRVLAAALSSTFGRFGGLTGNLMFGFLIDG-HC-LILICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 253 ~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
+|+++.++......+|..+++.+.+.+.+. .+ ...|++.+++.++..+..++.||+
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~ 197 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEP 197 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999984 45 566777777666665555556665
No 211
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.81 E-value=1.8e-06 Score=73.97 Aligned_cols=124 Identities=15% Similarity=0.034 Sum_probs=102.5
Q ss_pred cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHhhh
Q psy10938 160 TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVH-KMGAKWFLVAGLVLSSGVAMALYYV---QTSTQNLILSCIFEALTG 235 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 235 (314)
+..+.+..+..........+..+|....+++.. |.++++...+++..+.+++.++... .+.+......+++|++.+
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhh
Confidence 566788888899999999999999999998777 5677777778888887777665443 456677777788888888
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.......+...++.+++..|..+|.-...+.+...++..++|.+.|..
T Consensus 317 ~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 317 LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777788888888888999999999999999999999999998853
No 212
>KOG0569|consensus
Probab=98.81 E-value=1.2e-07 Score=83.87 Aligned_cols=141 Identities=19% Similarity=0.131 Sum_probs=103.7
Q ss_pred HHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 170 FSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV---QTSTQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
....+.+.+++++|.+..+.++||+|||..+....++..++.++..+. +.....+..-++.|...+........++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~ 142 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 355677889999999999999999999998888887777766665543 45556667777888888888888999999
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHH-HHHHhhhh--HHHHHHHHHHHHHHHHHHHhcccCCC
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMF-GFLIDGHC--LILICTLAAMLLIAGVFSMFLPATGK 310 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~-g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (314)
|..|++.||....+......+|..++..++ ..+..... ...+....+..++..+...++||+.+
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999988888888888885554 22222211 22233334445555556667788653
No 213
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.77 E-value=2.3e-07 Score=78.81 Aligned_cols=127 Identities=10% Similarity=0.077 Sum_probs=86.0
Q ss_pred ccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCCCCC
Q psy10938 57 DFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPLIPG 136 (314)
Q Consensus 57 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl~~~ 136 (314)
.+|+++.+.++..+.+..+..+|.+..+++.||+|+|+.+..+..+..++.++....++...+ ..-++.|++.+|+
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i--- 247 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIM--- 247 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHH---
Confidence 369999999999999999999999999999999999999888888887777666555443322 3455777777621
Q ss_pred CcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHH
Q psy10938 137 HPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLV 201 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 201 (314)
.|..-....+...++ .....+. .....+++.+.+.+.|.+.|+.|.+..+.
T Consensus 248 ~P~~~s~a~~~~~~~-------------~~~asai-~~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 248 FPTIFSLALNALGRH-------------TSQGSGI-LCLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHHHHHHhhhhhh-------------hhhhHHH-HHHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 001000000101100 1112222 34566788889999999999999766544
No 214
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.75 E-value=1.9e-07 Score=83.24 Aligned_cols=144 Identities=13% Similarity=0.020 Sum_probs=99.7
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHH----HhhhHHHHHHH-HHHHHHHHHHHHHhcchh-----------------H
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVH----KMGAKWFLVAG-LVLSSGVAMALYYVQTST-----------------Q 222 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~ 222 (314)
+....+.......+...+..++.|+++| |+|||+.+... .....+++.++.+.++.. .
T Consensus 37 ~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (477)
T TIGR01301 37 PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIV 116 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHH
Confidence 3456677778888889999999999999 59999988765 555555656665544321 1
Q ss_pred HHHHHHHHHHhhhhhchhheeeecccccchhh--HHHHHHHHhhhhhhhhhHHHHHHHHH--hhh-------------h-
Q psy10938 223 NLILSCIFEALTGCCISVVYCIMVDLFPTNLR--VLAAALSSTFGRFGGLTGNLMFGFLI--DGH-------------C- 284 (314)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r--~~~~g~~~~~~~~g~~~~p~~~g~l~--~~~-------------~- 284 (314)
......+..+......+...++++|..|+++| +.+.++.+...++|+.+++.+++... +.. +
T Consensus 117 ~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (477)
T TIGR01301 117 FVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANL 196 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchH
Confidence 12222334456666777788999999998765 57999999999999999999988652 211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-ccC
Q psy10938 285 LILICTLAAMLLIAGVFSMFL-PAT 308 (314)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~-~~~ 308 (314)
...|++.+++.+++.+...+. +|.
T Consensus 197 ~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 197 KSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHeeeeecc
Confidence 335666666666666655443 664
No 215
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.74 E-value=1.7e-07 Score=82.38 Aligned_cols=146 Identities=14% Similarity=0.016 Sum_probs=90.2
Q ss_pred hccccccccccccchhhHHhHhhH-HHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh------hhHHHHHHHH
Q psy10938 50 VLPSAQCDFGMTSSDKGWLNAAPM-LGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV------AQYYGVFLAL 122 (314)
Q Consensus 50 ~~~~~~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~ 122 (314)
..+.+.+|.|.+++++|++..... ....++.++.|++.||+|+|+.+..+..+..+..+.... .++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 345556678999999999988876 466778999999999999999988877665333332221 1233333344
Q ss_pred HHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHH
Q psy10938 123 RFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVA 202 (314)
Q Consensus 123 r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 202 (314)
..+.+++.+ -....-.....+...+++ ......+...+...++..+++.++|.+.|+.|.+..+..
T Consensus 310 ~~~~~~~~g---~~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~ 375 (390)
T TIGR02718 310 SAFGSLITG---ITSVAIYTAFMRFAGDGD-----------QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLS 375 (390)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHhCccc-----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 444443333 000000001111111101 134556677778899999999999999999998766665
Q ss_pred HHHHHHH
Q psy10938 203 GLVLSSG 209 (314)
Q Consensus 203 ~~~~~~~ 209 (314)
...+..+
T Consensus 376 ~~~~~l~ 382 (390)
T TIGR02718 376 GTVLAVL 382 (390)
T ss_pred HHHHHHH
Confidence 5544443
No 216
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.71 E-value=1e-07 Score=83.15 Aligned_cols=144 Identities=15% Similarity=0.083 Sum_probs=115.1
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHhhhhhch
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM-GAKWFLVAGLVLSSGVAMALYYVQ--TSTQNLILSCIFEALTGCCIS 239 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 239 (314)
+.+..++......+....-+.++++||++||+ |+|+++..+.++..++.+++.... .....++...+...+.+..-+
T Consensus 57 g~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~ 136 (498)
T COG3104 57 GFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKP 136 (498)
T ss_pred CcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccc
Confidence 35666666667777777777889999999996 999999999999999999988774 455566666666678888889
Q ss_pred hheeeecccccch--hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhcc
Q psy10938 240 VVYCIMVDLFPTN--LRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLP 306 (314)
Q Consensus 240 ~~~~~~~~~~p~~--~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 306 (314)
...+.+.|.+|++ .|..+.++.....++|+.++|++.+++.+..+ ...|...++-+..+.+..+..+
T Consensus 137 NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 137 NISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred cHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999763 36788899999999999999999999999988 4556666666666666555443
No 217
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.66 E-value=4.3e-09 Score=95.40 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV 112 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 112 (314)
++..+............++.++++|+++..+.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.+++.+++++
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc
Confidence 3344444555555667789999999999999999999999999999999999999988888999999999999888753
No 218
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.9e-06 Score=73.37 Aligned_cols=117 Identities=21% Similarity=0.122 Sum_probs=103.1
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHhhhhhchhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV---QTSTQNLILSCIFEALTGCCISVV 241 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
+..+++.....+..+..+..+..+++.+|+|+|.-+..+..++++++.++.-. .+....+...++.+.+.+......
T Consensus 46 s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~Letaa 125 (422)
T COG0738 46 TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAA 125 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhcc
Confidence 67788899999999999999999999999999999999999999999988533 334445566677788888888999
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
+.++..+.|++..+.-+.+.+.++.+|.+++|++++.+..
T Consensus 126 Np~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 126 NPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred chHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 9999999999888889999999999999999999999987
No 219
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.64 E-value=1.2e-06 Score=78.55 Aligned_cols=158 Identities=16% Similarity=0.107 Sum_probs=113.1
Q ss_pred HHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchh--HHHHHHHHHHHHHhHHHHh--------hhH
Q psy10938 46 VLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRK--ITLIGALLVDGLCGIASSV--------AQY 115 (314)
Q Consensus 46 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~ 115 (314)
..........+++|++..+...+.-...+...+|++++|++.||+|.| +++..++.++.+-.+...+ .++
T Consensus 300 i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~ 379 (477)
T PF11700_consen 300 IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKS 379 (477)
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCccc
Confidence 334445555678999999999999999999999999999999999999 8888888888665555555 677
Q ss_pred HHHHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhh
Q psy10938 116 YGVFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMG 195 (314)
Q Consensus 116 ~~~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 195 (314)
.+.+.+.-++.|+..|| .....+.-..++....+ ..+.-+++....-....+|+++.|.+.|..|
T Consensus 380 ~~~f~~~a~~~G~~~G~---~qs~sRs~~~~LiP~g~------------e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGG---IQSASRSLFSRLIPPGR------------EAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHHHHHHHHHHHhhh---HHHHHHHHHHHhCCCch------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888899999999982 11112222223322221 3445556666666788999999999999998
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhc
Q psy10938 196 -AKWFLVAGLVLSSGVAMALYYVQ 218 (314)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~ 218 (314)
.|.-+..-.++..++++++...+
T Consensus 445 ~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 445 SQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred CchhHHHHHHHHHHHHHHHHhhcc
Confidence 55555555555556666655443
No 220
>KOG2533|consensus
Probab=98.62 E-value=3.1e-07 Score=82.12 Aligned_cols=145 Identities=14% Similarity=0.097 Sum_probs=119.4
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhee
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
....+-+...+++.++.+++.+.++.+.||++..+.+....+...+..++....++.+..+++-++.|++.+..+|....
T Consensus 78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHH
Confidence 34566777888999999999999999999999777766666666666655566788888999999999999999999999
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh------hh-HHHHHHHHHHHHHHHHHHH-hcccC
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG------HC-LILICTLAAMLLIAGVFSM-FLPAT 308 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~------~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (314)
++...+.+++|++-+|+.++...+|+++|+++...+.+. .| ...|++-+++.++.+++.+ ++|+.
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 999999999999999999999999999999999876542 23 4567888888777776654 44654
No 221
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.60 E-value=6.5e-07 Score=81.33 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=98.4
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccc
Q psy10938 169 VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDL 248 (314)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
..++.....+...+...+.|.++|.+|||+.+..+.++..++.++....++....+....+.+++.+... .....++|+
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl 158 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISEL 158 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHh
Confidence 3445566777888888999999999999999999999999999999999888888888888887654443 445568999
Q ss_pred ccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHH
Q psy10938 249 FPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGV 300 (314)
Q Consensus 249 ~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~ 300 (314)
.|.+.|..+.++.....-.....+|.+...+..+.+ +..+++..+...++.+
T Consensus 159 ~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 159 VPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred cccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 999999888877776555555677777766654433 4455555555444443
No 222
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.57 E-value=1.8e-07 Score=61.23 Aligned_cols=70 Identities=24% Similarity=0.340 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHH
Q psy10938 34 GLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVD 103 (314)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 103 (314)
...+++.........|..|.+.++.|+|+.|+|.+.++..+...++++++|.++||+++++..+....+.
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3455666666677788888899999999999999999999999999999999999999998877665543
No 223
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=5.2e-10 Score=100.22 Aligned_cols=142 Identities=18% Similarity=0.087 Sum_probs=111.8
Q ss_pred hhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHHhhhhhchhhee
Q psy10938 167 PEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ---TSTQNLILSCIFEALTGCCISVVYC 243 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.......+...++..+|.++.|++.||+|||+.+..+..+..++.++..+.+ +.+.....-++.|++.+...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4566778888899999999999999999999999999999999999998888 7777778888899999999999999
Q ss_pred eecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh---HH-HHHHHHHHHHHHHHHHHhcccC
Q psy10938 244 IMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC---LI-LICTLAAMLLIAGVFSMFLPAT 308 (314)
Q Consensus 244 ~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~ 308 (314)
++.|..|++.|+....+.+....+|..++..+.-...+..+ +. .+...++..++..+...++||+
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999988888887776533322221 22 2333333443434444556765
No 224
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.55 E-value=2.6e-06 Score=74.07 Aligned_cols=155 Identities=13% Similarity=0.077 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHH
Q psy10938 37 YAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYY 116 (314)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (314)
.+.+.+|.+ +......+-++-+.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++..+..+=..+++++++.
T Consensus 234 ~~Y~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 234 AIYDVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HHHHHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SH
T ss_pred HHHHHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcch
Confidence 445555554 3333444444445566778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHH--HHHHHHhhhhhHHhHHHHHHHHh
Q psy10938 117 GVFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFS--HTLIIGLACIPSSLAMPLLVHKM 194 (314)
Q Consensus 117 ~~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~ 194 (314)
+.+.+.+.+.|+-.+ + -.-..-+-..+.++.+ ....... .....+++..+.+.++|.+-|++
T Consensus 313 ~~i~~~klLH~~e~~-l--~lva~fkYI~~~fd~r-------------lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~ 376 (412)
T PF01306_consen 313 WVISLIKLLHALEFP-L--LLVAAFKYITAHFDKR-------------LSATLYLVGFQFAKQIGIIILSPLAGYLYDRI 376 (412)
T ss_dssp HHHHHHHHHHHHHHH-H--HHHHHHHHHHHHS-GG-------------GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-H--HHHHHHHHHHHhCCHh-------------HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc
Confidence 999999999987663 0 0000001111111111 1111222 23455678888899999999999
Q ss_pred hhHHHHHHHHHHHH
Q psy10938 195 GAKWFLVAGLVLSS 208 (314)
Q Consensus 195 g~~~~~~~~~~~~~ 208 (314)
|-+.+..+...+..
T Consensus 377 G~~~tylimg~iv~ 390 (412)
T PF01306_consen 377 GFQHTYLIMGLIVL 390 (412)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 98766544333333
No 225
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.55 E-value=1.2e-06 Score=78.17 Aligned_cols=146 Identities=13% Similarity=0.078 Sum_probs=96.7
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHH----hhhHH-HHHHHHHHHHHHHHHHHHhcchh------HHHHHHHHHH
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHK----MGAKW-FLVAGLVLSSGVAMALYYVQTST------QNLILSCIFE 231 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 231 (314)
+.++...+...++..+...+..++.|+++|| +|||+ .+..+....+++.+++.+.++.. ......++.+
T Consensus 31 g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (437)
T TIGR00792 31 GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLG 110 (437)
T ss_pred CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 4467788888999999999999999999998 56644 45566667776666666554321 1222233344
Q ss_pred Hhhhhhchhheeeecccc-cchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh-------hh-HHHHHHHHHHHHHHHHHH
Q psy10938 232 ALTGCCISVVYCIMVDLF-PTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG-------HC-LILICTLAAMLLIAGVFS 302 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~-------~~-~~~~~~~~~~~~~~~~~~ 302 (314)
.+.........++..|.. ++++|++..+..+....+|..+++.+.+.+... .+ ...+.+.+++.++..+..
T Consensus 111 ~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 190 (437)
T TIGR00792 111 LFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIIC 190 (437)
T ss_pred HHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 444544555667788876 468899999999998889888887777666542 23 234555555555554444
Q ss_pred H-hcccC
Q psy10938 303 M-FLPAT 308 (314)
Q Consensus 303 ~-~~~~~ 308 (314)
. ..+|+
T Consensus 191 ~~~~~e~ 197 (437)
T TIGR00792 191 FFGTKER 197 (437)
T ss_pred HcCCEec
Confidence 3 34554
No 226
>KOG2504|consensus
Probab=98.49 E-value=2.9e-06 Score=76.58 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=117.2
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHH-HHHHHHhhhhhchhh
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLIL-SCIFEALTGCCISVV 241 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 241 (314)
+.+..+..+..++......+..++.+.+.||+|.|.+.+.+.++..+++++..+..+.+..++. .++.|++.+..+...
T Consensus 77 ~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pa 156 (509)
T KOG2504|consen 77 GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPA 156 (509)
T ss_pred CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcch
Confidence 3345557888888888888889999999999999999999999999999999999987765544 455677777777777
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
...+...+ +++|+.+.|+......+|..+-|.+.-++.+..| ...+++.+.+.+-.......+
T Consensus 157 iviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 157 VVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred hhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 77888766 5889999999999999999999999999999988 677777777776655555544
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.49 E-value=1.9e-06 Score=76.85 Aligned_cols=152 Identities=15% Similarity=0.089 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh-
Q psy10938 36 LYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ- 114 (314)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~- 114 (314)
..++............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+..+..++.++..+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~ 312 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP 312 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh
Confidence 3334444444444455555555333336778888899999999999999999999999999999999999999988886
Q ss_pred -HHHHHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHH
Q psy10938 115 -YYGVFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHK 193 (314)
Q Consensus 115 -~~~~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 193 (314)
|.+.+++.-++.|++.+. ...-......|..+..+.+.. .+..+...+......-++..++..+.+.+.+.
T Consensus 313 ~~~~~~~i~~~l~gi~~~~---~~~~~~a~~ad~id~~e~~tg-----~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGA---FFVIPWAMLADVIDYDEWKTG-----RRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred hhHHHHHHHHHHhHhhhcc---cccccccccccchhhHHHhcC-----CCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999982 110011111111111100000 00023344455555567777777777877777
Q ss_pred hh
Q psy10938 194 MG 195 (314)
Q Consensus 194 ~g 195 (314)
.|
T Consensus 385 ~G 386 (428)
T PF13347_consen 385 VG 386 (428)
T ss_pred hC
Confidence 65
No 228
>KOG0252|consensus
Probab=98.47 E-value=7.3e-07 Score=76.91 Aligned_cols=112 Identities=14% Similarity=0.015 Sum_probs=88.2
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc---c----hhHHHHHHHHHHHhhhhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ---T----STQNLILSCIFEALTGCC 237 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~ 237 (314)
.+...+.......++.++|+++.|++.||+|||+++-...+++.++.++..... + .+.+...-++.|++.++-
T Consensus 82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGD 161 (538)
T KOG0252|consen 82 PSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGD 161 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCC
Confidence 455666778888899999999999999999999999998888888887554432 1 123445556788899999
Q ss_pred chhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 238 ISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 238 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
+|...+..+|....+.||.-.+....+...|...|..+.
T Consensus 162 YPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 162 YPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred CcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 999999999999999999988887777766655554444
No 229
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.41 E-value=2.9e-05 Score=63.16 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHH
Q psy10938 27 YILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLC 106 (314)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 106 (314)
|..+......+...+ ..+.++...|++++.+|+|..|...+.+...+|..+| ++.|.+.|++|+|.++.+|.+...+|
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 444444444443333 4456777889999999999999999999999999875 88999999999999999999999999
Q ss_pred hHHHHhh-------hHHHHHHHHHHHhhcccC
Q psy10938 107 GIASSVA-------QYYGVFLALRFINGFASR 131 (314)
Q Consensus 107 ~~~~~~~-------~~~~~l~~~r~l~G~~~~ 131 (314)
......+ +++|.+.+..++.|.+.+
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~ 111 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSC 111 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHH
Confidence 8887653 467777777777777654
No 230
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.36 E-value=7.3e-06 Score=72.01 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhhccccccccc-cccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh-hH
Q psy10938 38 AYAAISITVLSFVLPSAQCDFG-MTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA-QY 115 (314)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~ 115 (314)
++.+.....+....+.+.+|.| .+....+.+.+...++-...-...+++..|+|.|+++.++.+...+=..+.+.. ++
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4444445555555666677777 677788888888888899999999999999999999999999999988888877 55
Q ss_pred HHHHHH----HHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHH
Q psy10938 116 YGVFLA----LRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLV 191 (314)
Q Consensus 116 ~~~l~~----~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 191 (314)
.+.... ...++|+..+ --......-.++..+ ++.+ ...+.-......+++..+|.+++|++.
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~---~~~~a~~~yi~~~~p-~~~~----------at~Q~l~~~~~~Glg~~iG~~igG~l~ 362 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFG---LFHAASVRYIDRIAP-PELR----------ATAQGLYSALSFGLGGAIGSLIGGWLY 362 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHH---HHHHHHHHHHHHhCC-ccch----------HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444333 3456887665 000000111111111 1100 223444455567899999999999999
Q ss_pred HHhhhHHHH
Q psy10938 192 HKMGAKWFL 200 (314)
Q Consensus 192 d~~g~~~~~ 200 (314)
|++|.+...
T Consensus 363 ~~~g~~~~~ 371 (400)
T PF03825_consen 363 DAFGARGMF 371 (400)
T ss_pred HHhcchhhh
Confidence 999977644
No 231
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.35 E-value=4e-06 Score=75.47 Aligned_cols=143 Identities=16% Similarity=0.097 Sum_probs=92.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhh-----hHHHHHHHHHHHH-HHHHHHHHhcchhHHHH-HHHHHHHhhhhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMG-----AKWFLVAGLVLSS-GVAMALYYVQTSTQNLI-LSCIFEALTGCC 237 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (314)
+..+.+.......+...+-.+ .|.++||++ ||+.+..+.++.. +....+...++...... ..++..++....
T Consensus 59 s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~ 137 (468)
T TIGR00788 59 DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALY 137 (468)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH
Confidence 556666666777777777555 999999997 6777777766653 33333333233222232 445566666666
Q ss_pred chhheeeecccccchhhHHH---HHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhcccCC
Q psy10938 238 ISVVYCIMVDLFPTNLRVLA---AALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFLPATG 309 (314)
Q Consensus 238 ~~~~~~~~~~~~p~~~r~~~---~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (314)
.....++..|..+ +.+... .+.......+|..+++.+.|.+.+..+ ...+++.+.+.++..+...+++|++
T Consensus 138 dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 138 DVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 6777888999887 444333 333333445899999999999999876 5566666666666644556667754
No 232
>KOG2816|consensus
Probab=98.35 E-value=6.8e-06 Score=73.06 Aligned_cols=133 Identities=20% Similarity=0.166 Sum_probs=102.8
Q ss_pred HHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhh
Q psy10938 175 IIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLR 254 (314)
Q Consensus 175 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r 254 (314)
..++..++.....|.++||+|||..+......+.+..+...+.. ++.++ ..-...+....+...++++++....+.|
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHH
Confidence 34566777888999999999999999988888887777776654 33222 1122335667778889999999999999
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH-hcccCCC
Q psy10938 255 VLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSM-FLPATGK 310 (314)
Q Consensus 255 ~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~ 310 (314)
....|+.+.....+..++|...+.+.+..+ ...+.+..+..++..+... ++||+..
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 999999999999999999999999999977 5667777766666666544 4577644
No 233
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.32 E-value=2.8e-05 Score=65.45 Aligned_cols=140 Identities=16% Similarity=-0.014 Sum_probs=117.8
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.+...+++..++..+......++..++.+|+|.++.+..+.++.++..++=... +.+..+....+.+.+.+..+...+
T Consensus 43 gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLP 121 (395)
T COG2807 43 GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLP 121 (395)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhh
Confidence 4578889999999999999999999999999999999999998888888776655 566667777788888999999999
Q ss_pred eeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh-h-HHHHHHHHHHHHHHHHHHHh
Q psy10938 243 CIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH-C-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 243 ~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~-~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
+.+.+.+|++ -+..+|++.....+++++++.+.-.+.++. + .......+...+++.++++-
T Consensus 122 slIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 122 SLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred HHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999865 489999999999999999999999999887 3 45566667777777665553
No 234
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.27 E-value=2.3e-05 Score=69.78 Aligned_cols=145 Identities=14% Similarity=0.094 Sum_probs=88.7
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-Hh---------cchhHHHHHHHHHHHh
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY-YV---------QTSTQNLILSCIFEAL 233 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~ 233 (314)
.+....+....+..++.++|..+......+...|+++....++..+..+.-. +. ++.+-.+.-..+....
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 3444445555555666666766666666667778877766665554433211 11 1111112222334444
Q ss_pred hhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHh
Q psy10938 234 TGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC---------LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~---------~~~~~~~~~~~~~~~~~~~~ 304 (314)
....+-......+|+.|+...|+.+++..++.++|..++..++..+.+..+ +...++..++.++...+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 444455566788999999999999999999999999999999988887654 12233344444444444545
Q ss_pred cccC
Q psy10938 305 LPAT 308 (314)
Q Consensus 305 ~~~~ 308 (314)
+|+.
T Consensus 412 Lp~~ 415 (433)
T PF03092_consen 412 LPPQ 415 (433)
T ss_pred cCCC
Confidence 6553
No 235
>PRK09848 glucuronide transporter; Provisional
Probab=98.27 E-value=4.5e-05 Score=68.45 Aligned_cols=141 Identities=9% Similarity=-0.135 Sum_probs=87.5
Q ss_pred hhccccc-cccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh--HHHHHHHHHHH
Q psy10938 49 FVLPSAQ-CDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ--YYGVFLALRFI 125 (314)
Q Consensus 49 ~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l 125 (314)
...|.+. +.+|.++...++......++..+++++++++.||+|+|+++..+..+..++.+...+.+ +++.+.+..++
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l 328 (448)
T PRK09848 249 ASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAI 328 (448)
T ss_pred hhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 3455443 44676665555555555677888999999999999999999999988888877776643 66777777788
Q ss_pred hhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH
Q psy10938 126 NGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK 197 (314)
Q Consensus 126 ~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 197 (314)
.|+|.+ -..+.......|..+..+.+. ..+..+...+.......++..++..+.+.+.+..|..
T Consensus 329 ~g~G~~---~~~~~~~al~~~~~~~~~~~~-----g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~ 392 (448)
T PRK09848 329 ASIGQG---VTMTVMWALEADTVEYGEYLT-----GVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI 392 (448)
T ss_pred HHHHHH---HHHHHHHHHHHHhhhhhHHhh-----CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888876 100000111111111100000 0001234445566666688888888888888877643
No 236
>KOG3626|consensus
Probab=98.25 E-value=2.3e-05 Score=72.32 Aligned_cols=85 Identities=14% Similarity=0.191 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHh
Q psy10938 28 ILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCG 107 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 107 (314)
..+.++++..+..++....+...+..+.+.|+++..+.|++.+.+-++..+...+..+...|..|-+.+-.+.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34555566667777766777788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q psy10938 108 IASSV 112 (314)
Q Consensus 108 ~~~~~ 112 (314)
+++++
T Consensus 177 ll~al 181 (735)
T KOG3626|consen 177 LLFAL 181 (735)
T ss_pred HHHhC
Confidence 98875
No 237
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.17 E-value=3.7e-05 Score=69.52 Aligned_cols=147 Identities=7% Similarity=-0.075 Sum_probs=89.5
Q ss_pred HHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHh-----hhHHH
Q psy10938 43 SITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSV-----AQYYG 117 (314)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~ 117 (314)
.........+.+.+....+....+++.+...++..++.+++++++||+|+|+.+..+..+..++.+.... .++.+
T Consensus 246 ~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 246 ASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 3334444555565554445566777777777899999999999999999999998888776665554432 34566
Q ss_pred HHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH
Q psy10938 118 VFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK 197 (314)
Q Consensus 118 ~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 197 (314)
.+++.-++.|++.+. ..........|..+..+.+. .....+...+......-++..++..+.|++.|..|..
T Consensus 326 ~~~i~~~l~g~~~~~---~~~~~~am~ad~id~~e~~t-----G~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 326 LIVIAGILLNIGTAL---FWVLQVIMVADTVDYGEYKL-----GIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHhhhhhhhhHhc-----CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 666677777777660 00000111122211111000 0001233445555666678888899999999988743
No 238
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.17 E-value=1.4e-05 Score=68.58 Aligned_cols=132 Identities=13% Similarity=0.082 Sum_probs=96.8
Q ss_pred cccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC
Q psy10938 52 PSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASR 131 (314)
Q Consensus 52 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 131 (314)
..-..++|++..+..++.-...+..++|++++|++.||+|.|+++..++++..+..+...+......+.+.-.+.|...|
T Consensus 277 ~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G 356 (438)
T COG2270 277 VFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLG 356 (438)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcc
Confidence 33455999999999999999999999999999999999999999999999999888877777666666777788888888
Q ss_pred CCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHH
Q psy10938 132 PLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKW 198 (314)
Q Consensus 132 Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 198 (314)
|.. ...+.-..+.....+ .+..-+++....-....+|++..+.+.|..|.-+
T Consensus 357 ~~q---A~SRSy~~~lvp~~k------------~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r 408 (438)
T COG2270 357 GAQ---ASSRSYLARLVPKGK------------EGRFFGLYALTGRAASFLGPFLVAVITQITGSSR 408 (438)
T ss_pred hHH---HHHHHHHHHhCCCcc------------ccceeehhhhhhhHHHHHHHHHHHHHHHHhcchh
Confidence 311 111111122222111 2334455555555778889999999999887543
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.17 E-value=1.9e-05 Score=70.78 Aligned_cols=120 Identities=13% Similarity=0.047 Sum_probs=80.8
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHH----hhhHH-HHHHHHHHHHHHHHHHHHhcch------hHHHHHHHHHH
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHK----MGAKW-FLVAGLVLSSGVAMALYYVQTS------TQNLILSCIFE 231 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 231 (314)
+.+....+....+.-+...+..++.|+++|| +|||+ .+..+.+..+++..+....++. ....+...+..
T Consensus 41 gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~ 120 (444)
T PRK09669 41 GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLS 120 (444)
T ss_pred CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 3466778888888888899999999999998 56644 4445666666666555555431 12222223334
Q ss_pred Hhhhhhchhheeeecccc-cchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh
Q psy10938 232 ALTGCCISVVYCIMVDLF-PTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG 282 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~ 282 (314)
.+.........++.+|.. ++++|.+..+.......+|+.+++.+...+...
T Consensus 121 ~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 121 LVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555567888887 457899988999888888888887766555543
No 240
>KOG0253|consensus
Probab=98.10 E-value=1.9e-05 Score=66.68 Aligned_cols=143 Identities=13% Similarity=0.139 Sum_probs=113.7
Q ss_pred ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeee
Q psy10938 166 NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIM 245 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
..+..++......+..++....|.+.|++|||+.........++.-.+-...++......+-.+.+++.++ .|...++-
T Consensus 112 ~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~y 190 (528)
T KOG0253|consen 112 EGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIY 190 (528)
T ss_pred hhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHH
Confidence 34455666677788899999999999999999999999999999888888888888888888888888888 88888999
Q ss_pred cccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHHHHhcccCCC
Q psy10938 246 VDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHCLILIC-TLAAMLLIAGVFSMFLPATGK 310 (314)
Q Consensus 246 ~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 310 (314)
.|..|...|..-.=.. ....+|.+....+.=....+.|+..++ ..+....+.+.++.+++|..+
T Consensus 191 le~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 191 LEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred HHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 9999998888766555 777799998888886667777754443 344556666667777787643
No 241
>PRK11462 putative transporter; Provisional
Probab=98.07 E-value=0.0001 Score=66.36 Aligned_cols=121 Identities=14% Similarity=0.029 Sum_probs=83.1
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHH----hhhHHHH-HHHHHHHHHHHHHHHHhcc--hh----HHHHHHHHHH
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHK----MGAKWFL-VAGLVLSSGVAMALYYVQT--ST----QNLILSCIFE 231 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~ 231 (314)
+.++..++.+..+.-+...+.-++.|.++|| +|||+.. .++.+..+++.+++...++ .. ...+...++.
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~ 120 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT 120 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 3355667777777778888888999999997 5766554 4566677777766655542 11 1222223344
Q ss_pred Hhhhhhchhheeeeccccc-chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 232 ALTGCCISVVYCIMVDLFP-TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.+.........++.+|+.+ +++|++..+.....+.+|..+++.+...+.+..
T Consensus 121 ~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 121 LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555556778888876 589999999999999999888888876666543
No 242
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.06 E-value=0.00019 Score=62.29 Aligned_cols=221 Identities=11% Similarity=-0.023 Sum_probs=146.1
Q ss_pred hhccccccc-cccccchhh-HHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHh
Q psy10938 49 FVLPSAQCD-FGMTSSDKG-WLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFIN 126 (314)
Q Consensus 49 ~~~~~~~~~-~~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 126 (314)
.+.|.+.+. .|++..|+. -+.....-.+....++...+.|..+.|++++++.+...+...+..+.++...+-+..+..
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFY 104 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence 344555554 788888764 567777788888999999999999999999999999999999999999999999999999
Q ss_pred hcccC-------------C---------------------------------------------------------CC--
Q psy10938 127 GFASR-------------P---------------------------------------------------------LI-- 134 (314)
Q Consensus 127 G~~~~-------------P---------------------------------------------------------l~-- 134 (314)
|++.+ | |+
T Consensus 105 g~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 105 GLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99988 1 11
Q ss_pred -------CCCccc-------chhhhhhhcCC---cCCCc--Ccc------------------------------------
Q psy10938 135 -------PGHPGK-------VASVCDVSALQ---PADNS--TVA------------------------------------ 159 (314)
Q Consensus 135 -------~~~~~~-------~~~~~~~~~~~---~~~~~--~~~------------------------------------ 159 (314)
+..+++ .....+..+.. ++... ...
T Consensus 185 ~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~ 264 (412)
T PF01770_consen 185 KRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYY 264 (412)
T ss_pred CcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHH
Confidence 111000 00000000000 00000 000
Q ss_pred ----------cc---cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHHhcchhHHH
Q psy10938 160 ----------TC---SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK--WFLVAGLVLSSGVAMALYYVQTSTQNL 224 (314)
Q Consensus 160 ----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (314)
+. .+.....-+..-....+.+.++.+..|++..++.+. ..+.....+.+.+++++.+.++.|..+
T Consensus 265 qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y 344 (412)
T PF01770_consen 265 QVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCY 344 (412)
T ss_pred HHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 11 233334445556666677777888888885555543 344455566666777777888888888
Q ss_pred HHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhh
Q psy10938 225 ILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGG 269 (314)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~ 269 (314)
...+++........+....-++.....+.-+-..|+...+.-+-.
T Consensus 345 ~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 345 AGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 888887777777777776666666666666777777766654433
No 243
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.04 E-value=0.0001 Score=59.96 Aligned_cols=119 Identities=12% Similarity=0.052 Sum_probs=82.6
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-------chhHHHHHHHHHHHhhh
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-------TSTQNLILSCIFEALTG 235 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 235 (314)
+.+..+...+.....++..+| +..|.+.|++|++.++.++.+...++...+...- +.|......++.+.+..
T Consensus 33 ~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~ 111 (250)
T PF06813_consen 33 GYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSC 111 (250)
T ss_pred CCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHH
Confidence 345667777777777887775 7889999999999999999999988887775542 12222222333332322
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
...........+.+| ++||++.|+.-....+++.+-..+...+.+..
T Consensus 112 ~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~ 158 (250)
T PF06813_consen 112 WFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD 158 (250)
T ss_pred HhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC
Confidence 233333444557787 57999999999999988888777776666553
No 244
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.02 E-value=0.0003 Score=59.61 Aligned_cols=149 Identities=13% Similarity=0.014 Sum_probs=98.7
Q ss_pred ccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchh
Q psy10938 161 CSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
..+....++............+...+.|.+.||+|||+..+...++..++++.- ..++.+..++.-++.|......++.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaTSLLfS~ 141 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIATSLLFSA 141 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHHHHHHHH
Confidence 446677788888888778888888899999999999999999888888888654 3456666666667777766666665
Q ss_pred hee-eecc----cccchhhHHHHHHHHhh-hhhhhhhHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHh-cccCCC
Q psy10938 241 VYC-IMVD----LFPTNLRVLAAALSSTF-GRFGGLTGNLMFGFLIDGHC---LILICTLAAMLLIAGVFSMF-LPATGK 310 (314)
Q Consensus 241 ~~~-~~~~----~~p~~~r~~~~g~~~~~-~~~g~~~~p~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~ 310 (314)
.-+ ++.| -+|++..+...+..... +.+-.+.+..+.-.+.|..+ ..+|.....+..++.++... .+|..+
T Consensus 142 FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 142 FESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 433 2233 35666666666655533 33445555556656666543 45677766666666665443 355443
No 245
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.96 E-value=0.00046 Score=64.37 Aligned_cols=139 Identities=14% Similarity=0.072 Sum_probs=98.3
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhcch--------hHHHHHHHHHHHhhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHK-MGAKWFLVAGLVLSSGVAMALYYVQTS--------TQNLILSCIFEALTG 235 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 235 (314)
+...+......+....-+.++++|++.|+ +|+++.+.++.++..++.+++.+...+ ...+....+...+.+
T Consensus 21 ~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~G 100 (654)
T TIGR00926 21 SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTG 100 (654)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhcc
Confidence 44455555556666666778889999997 599999999998888888777653211 123344555666788
Q ss_pred hhchhheeeecccccch---hhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh-------h-HHHHHHHHHHHHHHHHHHH
Q psy10938 236 CCISVVYCIMVDLFPTN---LRVLAAALSSTFGRFGGLTGNLMFGFLIDGH-------C-LILICTLAAMLLIAGVFSM 303 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~---~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~-------~-~~~~~~~~~~~~~~~~~~~ 303 (314)
..-+...+...|.++++ .|-..+.+.....++|+.+++++.+++.+.. + ...|.+.+++++++.++..
T Consensus 101 giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 101 GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888653 4677888888889999999999999887543 2 3455555555655555443
No 246
>KOG0637|consensus
Probab=97.95 E-value=2.2e-05 Score=67.90 Aligned_cols=81 Identities=14% Similarity=0.067 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhccc----ccchhHHH-HHHHHHHHHHhHHHHh
Q psy10938 38 AYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLAD----TQGRKITL-IGALLVDGLCGIASSV 112 (314)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~ 112 (314)
+-..+.+..--..+|++.++.|++....+.+--...+...+.||+.|..+| ||||||.+ ..+.....++.++..+
T Consensus 42 ~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~ 121 (498)
T KOG0637|consen 42 AGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGY 121 (498)
T ss_pred HHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhh
Confidence 333344444445677788889999999999888888999999999999999 68988866 4555666777778887
Q ss_pred hhHHHH
Q psy10938 113 AQYYGV 118 (314)
Q Consensus 113 ~~~~~~ 118 (314)
+.++..
T Consensus 122 aaDig~ 127 (498)
T KOG0637|consen 122 AADIGL 127 (498)
T ss_pred HhhhhH
Confidence 766544
No 247
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.94 E-value=0.00091 Score=59.20 Aligned_cols=142 Identities=13% Similarity=0.062 Sum_probs=93.7
Q ss_pred HHHHhhccccccc-cccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhh--HHHHHHH
Q psy10938 45 TVLSFVLPSAQCD-FGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQ--YYGVFLA 121 (314)
Q Consensus 45 ~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~ 121 (314)
...+.....+.+. +|.++.+..+.......+..++.+++.++++|+|+|+++..+.++..++.++..+.+ +.+..++
T Consensus 253 ~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~ 332 (467)
T COG2211 253 NIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVV 332 (467)
T ss_pred HHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 3334444444433 455666677888888888888899999999999999999999999999999988876 7888888
Q ss_pred HHHHhhcccC---CCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhH
Q psy10938 122 LRFINGFASR---PLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAK 197 (314)
Q Consensus 122 ~r~l~G~~~~---Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 197 (314)
..++.++|.+ |++-..-.+..+..| ++..+++ .+...+......=++..++..+.|++.+.+|..
T Consensus 333 ~~~i~~~g~~~~~~l~wam~~d~vDyge-~~TG~R~----------eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 333 ALIIAGVGTGIANPLPWAMVADTVDYGE-WKTGVRR----------EGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHhhccccccHHHhcchhhHHH-HHhCCCc----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8899888887 211000001111111 1111111 223333344444467777888888888888744
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.93 E-value=0.0032 Score=55.65 Aligned_cols=116 Identities=9% Similarity=-0.020 Sum_probs=77.9
Q ss_pred cccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHhcc-h---hHHH---HHHHH
Q psy10938 160 TCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMAL---YYVQT-S---TQNL---ILSCI 229 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~~-~---~~~~---~~~~~ 229 (314)
...|.++...+..-....+.++.|.++..++.+|+|..+.-.++......++.+. .+.+. + .... ....+
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 3457777888888888889999999999999999998776666655444333322 22332 1 1111 11111
Q ss_pred HHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHH
Q psy10938 230 FEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLM 275 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~ 275 (314)
.-++.-+.--....+..|.+|+++||+..|.-+...++...+.-.+
T Consensus 366 SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 366 SRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 2223333344456788999999999999999999998877765444
No 249
>KOG4332|consensus
Probab=97.90 E-value=6.3e-05 Score=60.78 Aligned_cols=228 Identities=16% Similarity=0.098 Sum_probs=131.1
Q ss_pred HHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHH
Q psy10938 46 VLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFI 125 (314)
Q Consensus 46 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 125 (314)
..+|.+-.+-+.+|....++|.+.-..+-...+...+.|.++||-|||+.-+.-++-+.++. +.-.++.|-.++++|.+
T Consensus 55 LQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVL 133 (454)
T ss_pred hcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhh
Confidence 44566667777889999999999888888888999999999999999997555444444332 33457889999999999
Q ss_pred hhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhh--hHHHHHHH
Q psy10938 126 NGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMG--AKWFLVAG 203 (314)
Q Consensus 126 ~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~ 203 (314)
.|+..+-|- ..-+.+.-..++.++. . +....+....-......++..+++.+.+-.++|.++ +-..+-..
T Consensus 134 GGiaTsLLF----SaFEsWliaEHnekr~--F--eqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAA 205 (454)
T KOG4332|consen 134 GGIATSLLF----SAFESWLIAEHNEKRG--F--EQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAA 205 (454)
T ss_pred hhHHHHHHH----HHHHHHHHHHhhhccC--C--hHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHH
Confidence 999886100 0000000000000000 0 000001122222334455667777788888888875 33333333
Q ss_pred HHHHHHHHHHH--HHhcch-----------------------hHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHH
Q psy10938 204 LVLSSGVAMAL--YYVQTS-----------------------TQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAA 258 (314)
Q Consensus 204 ~~~~~~~~~~~--~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~ 258 (314)
....+++..+. .+..+. --...+..+-..+.+..+...+.+.+.+-|.+ .+.-.
T Consensus 206 acfLaigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~-e~iPh 284 (454)
T KOG4332|consen 206 ACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND-EEIPH 284 (454)
T ss_pred HHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCc-ccCCc
Confidence 33333333222 222110 01122233344566666666677777776543 34445
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 259 ALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 259 g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
|+......+.+.+|+-+...+..+.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s 309 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRS 309 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcC
Confidence 6666666677777777776776553
No 250
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.88 E-value=0.00027 Score=59.13 Aligned_cols=91 Identities=30% Similarity=0.390 Sum_probs=74.9
Q ss_pred HHHHHHHHhhcccccccccccc--chhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhH--H
Q psy10938 41 AISITVLSFVLPSAQCDFGMTS--SDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQY--Y 116 (314)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~ 116 (314)
..+.....+..+.+.++++.+. .+.++..+.+.++..+++++.|.++||+|||+.+..+......+.+...+..+ .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 15 GLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 3555555667777777777666 48899999999999999999999999999999888888776666667777665 8
Q ss_pred HHHHHHHHHhhcccC
Q psy10938 117 GVFLALRFINGFASR 131 (314)
Q Consensus 117 ~~l~~~r~l~G~~~~ 131 (314)
+.+++.|+.+|++.+
T Consensus 95 ~~~~~~~~~~g~~~~ 109 (338)
T COG0477 95 ALLLILRLLQGLGGG 109 (338)
T ss_pred HHHHHHHHHHHhhhH
Confidence 999999999998887
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.80 E-value=0.00069 Score=50.94 Aligned_cols=109 Identities=15% Similarity=0.094 Sum_probs=87.2
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
.-..+......+..++.+.+.+++|.|+.+.++.+...+..+.. +.++.+..+....+.|++.+..+...-.++.+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 33445555566777888999999999999999988887666554 44566777888888999999999999899999988
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
++.+++-.++...+.+.+.++|..+.-.+.
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998888888888877764443
No 252
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.65 E-value=0.0012 Score=61.60 Aligned_cols=153 Identities=12% Similarity=-0.069 Sum_probs=99.5
Q ss_pred cccccccccccchhhHHhHhhHHHHHHhhhhhhhccc-ccchhHHHHHHHHHHHHHhHHHHhhhH--------HHHHHHH
Q psy10938 52 PSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLAD-TQGRKITLIGALLVDGLCGIASSVAQY--------YGVFLAL 122 (314)
Q Consensus 52 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~ 122 (314)
..+.+.+|.+.++...+...+....-+..++.|+++| ++||++.+.++.++..++..+.+++.. ....+++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 3344568889998888899998888999999999999 589999999999999999888776421 2235556
Q ss_pred HHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh-------h
Q psy10938 123 RFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM-------G 195 (314)
Q Consensus 123 r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-------g 195 (314)
-.+..+|.||.+ +.-..-..+..+..+.+. ....-.+.....+++..++..+.+++.+++ +
T Consensus 92 LaLia~G~GgiK---p~vsaf~gdqf~~~~~~~---------~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~ 159 (654)
T TIGR00926 92 LALIALGTGGIK---PCVSAFGGDQFEERQLSL---------RSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC 159 (654)
T ss_pred HHHHHhhccccc---cCchhhhHhhcCccchhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc
Confidence 666777777321 111111222222111000 122344555666777888888888887664 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q psy10938 196 AKWFLVAGLVLSSGVAMALYY 216 (314)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~ 216 (314)
+.....+..+++.++++.+..
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666666665543
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.61 E-value=0.0045 Score=53.92 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=69.0
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHH---HHHhcchhHHHHHHHHHHHhhhhhchhheeeecc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMA---LYYVQTSTQNLILSCIFEALTGCCISVVYCIMVD 247 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.+...+.++.++++-....+ |+.+.+.+.....+..+.+++ ..+.++.|..+..++.-|...+..+...+..+.|
T Consensus 285 ~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~ 362 (402)
T PF02487_consen 285 WYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE 362 (402)
T ss_pred HHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 44555666655554433322 343444443333333333322 2345677777777788888888888888888888
Q ss_pred cccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 248 LFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 248 ~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
..|+++|-.++|.....-.+|..++..++
T Consensus 363 ~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 363 EVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred cCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 89999999999999988888887777765
No 254
>KOG3098|consensus
Probab=97.43 E-value=0.018 Score=51.17 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=55.2
Q ss_pred hhHH-hHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccC
Q psy10938 65 KGWL-NAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASR 131 (314)
Q Consensus 65 ~g~~-~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 131 (314)
.|.. .++.+..+.+.+++.+.+.|+.|.|+.+.++..........+-+-+ -+-++.+-.+.|+|.+
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaa 117 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAA 117 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHH
Confidence 3443 7888888999999999999999999999999999988776665554 5557788899999998
No 255
>KOG4686|consensus
Probab=97.36 E-value=0.002 Score=52.86 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=80.1
Q ss_pred ccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHH-HhHHHHhhhHHHHHHHHHHHhhcccC
Q psy10938 53 SAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGL-CGIASSVAQYYGVFLALRFINGFASR 131 (314)
Q Consensus 53 ~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~~ 131 (314)
.+++.||+|+...+.+.|....-.++.+++.|.++||+|++...+.+..+..+ +.....++ ++.=..+-.+.|+..+
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHH
Confidence 46788999999999999999999999999999999999999887666554443 33333332 1111223344555443
Q ss_pred CCCCCCcccchh----hhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhh
Q psy10938 132 PLIPGHPGKVAS----VCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMG 195 (314)
Q Consensus 132 Pl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 195 (314)
--..+ ......+.+ .+..-+...++.+++-.+.+++.|.+.|.-|
T Consensus 368 -------llAcslWP~va~~vpE~q------------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 368 -------LLACSLWPCVASLVPEEQ------------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred -------HHHHHHhhhhhhhCCHHH------------hcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 00000 001111111 3445567788888888899999999999766
No 256
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.31 E-value=0.0092 Score=51.67 Aligned_cols=130 Identities=18% Similarity=0.075 Sum_probs=93.0
Q ss_pred hccccccccccccchhhHHhHhhHHHHHHhhhhhhhccc-ccchhHHHHHHHHHHHHHhHHHH---hhhHHHHHHHHHHH
Q psy10938 50 VLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLAD-TQGRKITLIGALLVDGLCGIASS---VAQYYGVFLALRFI 125 (314)
Q Consensus 50 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l 125 (314)
+-|+=.+-||++..|...+......|..++-...|++.. |.++|+.-.+++....++..+.. ...+.+.+...-++
T Consensus 231 LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 345556679999999999999999999999999998877 77888887788887777666544 44678889999999
Q ss_pred hhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHh
Q psy10938 126 NGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKM 194 (314)
Q Consensus 126 ~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 194 (314)
.|++.| - -.........+-... +......+...........++...+|.+.|-.
T Consensus 311 ~G~g~G---~---f~vgals~mM~lt~~---------~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 311 LGLGNG---L---FTVGALSLMMDLTSA---------GRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHhhh---H---HHHHHHHHHHhCCCC---------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 1 111111111111110 01345566667777778888888899888864
No 257
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.30 E-value=0.0028 Score=56.56 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=89.0
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHHHHhhh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMG-----AKWFLVAGLVLSSGVAMALYYVQT----STQNLILSCIFEALTG 235 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (314)
++.+...+.....+-. ....+.|.++|.+. ||+.+.++.++..++...+...+. .....+..++..++..
T Consensus 23 s~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a 101 (433)
T PF03092_consen 23 SPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYA 101 (433)
T ss_pred CHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHH
Confidence 4444444444443333 24667899999873 566666677777665665555443 2333344444555556
Q ss_pred hhchhheeeecccc---cchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10938 236 CCISVVYCIMVDLF---PTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 236 ~~~~~~~~~~~~~~---p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (314)
..-...-+...|.. |.+ ++...+.......+|++++..+.|.+.+..+ ...+.+.+.+..+..+..+++
T Consensus 102 ~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 102 FADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred HHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 66666666777765 333 7888899999999999999999999999876 445666666655555554444
No 258
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.26 E-value=0.003 Score=52.76 Aligned_cols=115 Identities=23% Similarity=0.206 Sum_probs=83.8
Q ss_pred hHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHhhhhhchhheeee
Q psy10938 168 EVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQT--STQNLILSCIFEALTGCCISVVYCIM 245 (314)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
..........+....+.+..|.+.||+|||+....+........+...+..+ .+.........+...+...+....+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4566677777777788899999999999997776666543444444444444 34444444446667777888888999
Q ss_pred cccccc-hhhHHHHHHHHh-hhhhhhhhHHHHHHHHHhh
Q psy10938 246 VDLFPT-NLRVLAAALSST-FGRFGGLTGNLMFGFLIDG 282 (314)
Q Consensus 246 ~~~~p~-~~r~~~~g~~~~-~~~~g~~~~p~~~g~l~~~ 282 (314)
.|..|+ +.|+...+.... ...++..++|.+.+.+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 120 SEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 678888888888 5778888998887777765
No 259
>KOG3762|consensus
Probab=97.22 E-value=0.00057 Score=60.70 Aligned_cols=162 Identities=14% Similarity=0.014 Sum_probs=118.8
Q ss_pred HHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHH
Q psy10938 39 YAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGV 118 (314)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 118 (314)
+.+.....+...+=...||.+-.+...|.....-..+-.+.-++.+++.+|+|+-+++..++++..+=.+.....+|+|+
T Consensus 382 ~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~ 461 (618)
T KOG3762|consen 382 VMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWM 461 (618)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchh
Confidence 33444433334445567888888888888888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCcccchhhh---hhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhh
Q psy10938 119 FLALRFINGFASRPLIPGHPGKVASVC---DVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMG 195 (314)
Q Consensus 119 l~~~r~l~G~~~~Pl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 195 (314)
.+-..+++|+..+ .--.... +....+..+ ...+..+.....+++--+|++++|.+..|+|
T Consensus 462 vLPieilqgit~a-------liWaa~~sY~s~vaPp~l~----------at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg 524 (618)
T KOG3762|consen 462 VLPIEILQGITHA-------LIWAAIISYASHVAPPGLR----------ATAQGLLQGIFHGLGKGLGSLIGGFVVERFG 524 (618)
T ss_pred eeeHHHHHHHHHH-------HHHHHHHHHHHhhCCCcch----------HHHHHHHHHHhcccCcchhhhhhhhhheeeh
Confidence 9999999999887 1111100 111111100 2234445556677888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q psy10938 196 AKWFLVAGLVLSSGVAMALYYV 217 (314)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~ 217 (314)
-|....+..+.+.+.++.+...
T Consensus 525 ~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 525 ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 9988887777766666665443
No 260
>KOG2325|consensus
Probab=97.04 E-value=0.0082 Score=53.51 Aligned_cols=145 Identities=14% Similarity=-0.003 Sum_probs=97.0
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHH---hcch--hHHHHHHHHHHHhhh
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGA-KWFLVAGLVLSSGVAMALYY---VQTS--TQNLILSCIFEALTG 235 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~ 235 (314)
.+......++..+...++..++.+..|+...|.+. |+.+..+.+++.++.++... .++. +.++..-++.|++ .
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg-~ 144 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG-V 144 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC-c
Confidence 55566778888889999999999999999999885 77888888888888877632 2332 2233333333322 2
Q ss_pred hhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh--------------hhHHHHHHHHHHHHHHHHH
Q psy10938 236 CCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG--------------HCLILICTLAAMLLIAGVF 301 (314)
Q Consensus 236 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~--------------~~~~~~~~~~~~~~~~~~~ 301 (314)
+.....-.|+++..-.++|.++++..+....+|.++||.+...+.-. ..+.+-|+.+++.++..+.
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~ 224 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVI 224 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHH
Confidence 33455667888876667788888888776677777777765443321 1134667777777776665
Q ss_pred HH-hccc
Q psy10938 302 SM-FLPA 307 (314)
Q Consensus 302 ~~-~~~~ 307 (314)
.. +++|
T Consensus 225 i~~~f~E 231 (488)
T KOG2325|consen 225 ILFFFKE 231 (488)
T ss_pred HHhheee
Confidence 44 3454
No 261
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.92 E-value=0.056 Score=47.32 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=90.7
Q ss_pred hHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHH
Q psy10938 182 PSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALS 261 (314)
Q Consensus 182 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 261 (314)
..-+....+.|.++.|.+++...+...+...++.+.++...+-+.-+..|..... -...++++-..+|+++.-++.+..
T Consensus 56 ~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~ 134 (412)
T PF01770_consen 56 AFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYT 134 (412)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHH
Confidence 3445778899999999999999998888888888888877766666666644333 344556776777888888999999
Q ss_pred HhhhhhhhhhHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhcccCC
Q psy10938 262 STFGRFGGLTGNLMFGFLIDGHC---LILICTLAAMLLIAGVFSMFLPATG 309 (314)
Q Consensus 262 ~~~~~~g~~~~p~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (314)
....-+|..++..++-.+....+ .....+......++.+..+++|..+
T Consensus 135 raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 135 RAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99888888888888766665433 2223344444555556667776543
No 262
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.76 E-value=0.09 Score=47.26 Aligned_cols=98 Identities=8% Similarity=0.000 Sum_probs=72.5
Q ss_pred HhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--c-----------------------------chhHHHHHHHHHHH
Q psy10938 184 SLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV--Q-----------------------------TSTQNLILSCIFEA 232 (314)
Q Consensus 184 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~-----------------------------~~~~~~~~~~~~~~ 232 (314)
.++.+++++|++|++.+..........++++.+. + +.|...........
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 6778999999999998887776666666555443 1 01222233333444
Q ss_pred hhhhhch-hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 233 LTGCCIS-VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 233 ~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
......+ ..++++.|....++-.+-+++....+++|..+++.+..++.+
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555 678999999999999999999999999999999999888773
No 263
>KOG2563|consensus
Probab=96.76 E-value=0.023 Score=49.83 Aligned_cols=117 Identities=17% Similarity=0.193 Sum_probs=82.2
Q ss_pred ChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcch-----hHHHHHHHHHHHhhhhhchh
Q psy10938 166 NPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTS-----TQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 240 (314)
...+-+...++.+..++-.+.+-|+.||+|-|....++..+.+++..+-.....+ ... .+........+...+.
T Consensus 78 ~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 78 SSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLTHTGQSIAAAAQPF 156 (480)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchh-hhhHHhHHHHHHhhhH
Confidence 3455677788888899999999999999999999999999999888775443222 111 1222223333333333
Q ss_pred he---eee-cccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Q psy10938 241 VY---CIM-VDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGH 283 (314)
Q Consensus 241 ~~---~~~-~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 283 (314)
.. +-+ .-.+|+++|+++..+......+|.+++-++-..+..+.
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 32 223 33489999999999999988899998888877776554
No 264
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.58 E-value=0.072 Score=40.11 Aligned_cols=73 Identities=12% Similarity=0.036 Sum_probs=57.9
Q ss_pred cccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCC
Q psy10938 60 MTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPL 133 (314)
Q Consensus 60 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl 133 (314)
+++..--.-.++......+++++.+.+.+++|.|+.++++.+...+-... -+-++.+.++.+-.+.|++.+++
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALL 106 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHh
Confidence 33333334466777788889999999999999999999999998864443 45778889999999999999953
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.19 E-value=0.018 Score=37.59 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=38.4
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHH
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVL 206 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 206 (314)
.+.+..+.+....+..+..++++++.|.++||+++++........
T Consensus 30 ~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 30 LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 456788999999999999999999999999999988877655433
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.15 E-value=0.042 Score=48.07 Aligned_cols=107 Identities=12% Similarity=-0.039 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cch-------hHHHHHHHHHHHhhhhhchhheeeecccccch---hhHHHHHHHHhhh
Q psy10938 198 WFLVAGLVLSSGVAMALYYV--QTS-------TQNLILSCIFEALTGCCISVVYCIMVDLFPTN---LRVLAAALSSTFG 265 (314)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~r~~~~g~~~~~~ 265 (314)
+++.++.++..++.+++... +.. ...++...+..++.++.-|...++.+|.++++ .|.+.+.......
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45667777777777774332 221 34566666778889999999999999998765 4677778888888
Q ss_pred hhhhhhHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh
Q psy10938 266 RFGGLTGNLMFGFLIDGHC-LILICTLAAMLLIAGVFSMF 304 (314)
Q Consensus 266 ~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 304 (314)
++|+.+++...+++.++.+ ...|.+.++..+++.+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999998888 45566666666665554443
No 267
>KOG3574|consensus
Probab=96.15 E-value=0.04 Score=47.32 Aligned_cols=53 Identities=13% Similarity=0.126 Sum_probs=43.5
Q ss_pred HHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh
Q psy10938 230 FEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG 282 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~ 282 (314)
.+.+....+...++..+++.++..-|+.+.+.|+..++|+-.=..+...+.|.
T Consensus 379 ~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 379 HQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG 431 (510)
T ss_pred hhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhccc
Confidence 33444555566788899999999999999999999999998888888888874
No 268
>KOG3098|consensus
Probab=95.76 E-value=0.18 Score=44.93 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=89.5
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
....+......+..++++.+.|+.+.|+.+.++........+.+.+. +.+-.+....+.|++.+..+...-.+..|...
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 33667777788889999999999999999999998888777777655 46667778888898999889999999999999
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHH
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGF 278 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~ 278 (314)
++.+.+..++...+...+.++|..+.-.
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 9999999999999998888887666533
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.63 E-value=1.6 Score=39.38 Aligned_cols=63 Identities=6% Similarity=-0.080 Sum_probs=47.2
Q ss_pred cccccccccc-----ccchhhHHhHhhHHHHHHh-hhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 51 LPSAQCDFGM-----TSSDKGWLNAAPMLGMVFG-SYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 51 ~~~~~~~~~~-----s~~~~g~~~s~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
+-++++++.+ +.+.+.++-+...+..++. .++.+++++|++|++++-.....+.....++++.
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~v 94 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFV 94 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHH
Confidence 4455666555 3357888888887777777 8999999999999999888777777666665543
No 270
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.50 E-value=0.11 Score=34.54 Aligned_cols=61 Identities=16% Similarity=0.045 Sum_probs=53.0
Q ss_pred cCCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhH
Q psy10938 162 SGEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQ 222 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (314)
.+.+..+.++..+...++..+|.+...++.++.+++..+..+.+...+..+.+.+.++.+.
T Consensus 22 ~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 22 GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 3457889999999999999999999999999988888899999999999888888776654
No 271
>PRK03612 spermidine synthase; Provisional
Probab=95.08 E-value=0.59 Score=42.87 Aligned_cols=132 Identities=18% Similarity=0.169 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHH---HHHHHHHHHHhcc-----hhHHHHHHHHHHHhhhhhc
Q psy10938 167 PEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVL---SSGVAMALYYVQT-----STQNLILSCIFEALTGCCI 238 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 238 (314)
...+...+.+..+..+|..+++++.++.-++... .-..+ ..++..++..... ....+...++.+++.++..
T Consensus 50 ~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 128 (521)
T PRK03612 50 TQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEI 128 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666677777777777765433322221 11111 1111111111101 1112233344556677777
Q ss_pred hhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh-hhh-HHHHHHHHHHHHHHHH
Q psy10938 239 SVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID-GHC-LILICTLAAMLLIAGV 300 (314)
Q Consensus 239 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~-~~~-~~~~~~~~~~~~~~~~ 300 (314)
|...-...+.. .+.-+...|-......+|+++|+++.+++.- ..| ....++.+.+.+++++
T Consensus 129 Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 129 PLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 76655444432 2234667788888999999999999988765 455 3444444444444443
No 272
>KOG3097|consensus
Probab=94.22 E-value=3.1 Score=35.43 Aligned_cols=60 Identities=25% Similarity=0.377 Sum_probs=46.5
Q ss_pred HHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCC
Q psy10938 73 MLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPL 133 (314)
Q Consensus 73 ~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl 133 (314)
.+..+.++++.+.+.+++|.|+.+.++....... +..-+-+.++.++-.-...|++.+|+
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~ 127 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPI 127 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccc
Confidence 4455566666669999999999999888877653 33344578889999999999999974
No 273
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.01 E-value=0.01 Score=54.34 Aligned_cols=118 Identities=8% Similarity=-0.032 Sum_probs=1.9
Q ss_pred CCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc----c--------------------
Q psy10938 164 EVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ----T-------------------- 219 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~-------------------- 219 (314)
.+..+.+.+.+..-++..+..++..++.+|..|-+.+..+.++.+++.+++..-+ .
T Consensus 35 l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c 114 (539)
T PF03137_consen 35 LSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLC 114 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccc
Confidence 4667888888889999999999999999998888888888888888877764321 0
Q ss_pred --------------------------hhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHH
Q psy10938 220 --------------------------STQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGN 273 (314)
Q Consensus 220 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p 273 (314)
...++...++.|++....+++..+|+-|.++++..+...|+......+|-++|=
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf 194 (539)
T PF03137_consen 115 DSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGF 194 (539)
T ss_dssp -------------------------------------SSS----------------------------------------
T ss_pred cccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHH
Confidence 001222334456666777888899999999999999999999998888888887
Q ss_pred HHHHHHHh
Q psy10938 274 LMFGFLID 281 (314)
Q Consensus 274 ~~~g~l~~ 281 (314)
.++|...+
T Consensus 195 ~lg~~~L~ 202 (539)
T PF03137_consen 195 LLGSFCLR 202 (539)
T ss_dssp --------
T ss_pred HHHHHHHh
Confidence 77776653
No 274
>KOG1479|consensus
Probab=93.88 E-value=3.5 Score=36.23 Aligned_cols=107 Identities=12% Similarity=0.088 Sum_probs=61.2
Q ss_pred HHHHH-HHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH---------HhcchhHHHHHHHHHHHhhhhhchh
Q psy10938 171 SHTLI-IGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALY---------YVQTSTQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 171 ~~~~~-~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
..... +++...+|.....+..++- ||+. .+...+-.+..-++. ...+.+.......++++..|-..+.
T Consensus 286 ~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 286 LLVFLSFNVFDLIGSILAALLTWPD-PRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHhHHHHHhhhhhhhcccCCC-Ccee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 33444 6677777766665554432 2322 222222222222222 2335667777788888888888888
Q ss_pred heeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHH
Q psy10938 241 VYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLI 280 (314)
Q Consensus 241 ~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~ 280 (314)
.+.+.++.+|++++-.+-.+...+-..|-..|.. .+++.
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~-~s~l~ 402 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL-LSWVF 402 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH-HHHHH
Confidence 9999999998887655444444444444444443 33443
No 275
>KOG3626|consensus
Probab=93.87 E-value=0.16 Score=47.78 Aligned_cols=143 Identities=12% Similarity=0.033 Sum_probs=97.7
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc-------------------c----------
Q psy10938 169 VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ-------------------T---------- 219 (314)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------~---------- 219 (314)
.+++...+-++..+......+...|..|-+.+.++.+++++..++..+.+ .
T Consensus 134 sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~ 213 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCN 213 (735)
T ss_pred ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhcc
Confidence 44444444555666666677777777777777777777777776654321 0
Q ss_pred ----------------------hh-HHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 220 ----------------------ST-QNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 220 ----------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
++ .++...++.|.+....++...+|+-|.+.+++.+...|+..++..+|-++|=+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllg 293 (735)
T KOG3626|consen 214 KSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLG 293 (735)
T ss_pred CCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHH
Confidence 01 1223344456667777888889999999999889999999999888888888887
Q ss_pred HHHHhhh------------------h--HHHHHHHHHHHHHHHHHHHhcccCCCC
Q psy10938 277 GFLIDGH------------------C--LILICTLAAMLLIAGVFSMFLPATGKK 311 (314)
Q Consensus 277 g~l~~~~------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (314)
+...+.+ | |..|++.+.+.++.++..+++|++.++
T Consensus 294 S~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 294 SFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 7775421 2 345677777888887777777765443
No 276
>KOG1237|consensus
Probab=93.72 E-value=2.5 Score=39.30 Aligned_cols=162 Identities=11% Similarity=-0.034 Sum_probs=103.6
Q ss_pred HHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccc-cchhHHHHHHHHHHHHHhHHHHhhhHHH--------
Q psy10938 47 LSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADT-QGRKITLIGALLVDGLCGIASSVAQYYG-------- 117 (314)
Q Consensus 47 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~-------- 117 (314)
...++..+.++++.+...+.-..+.+.-......+..++++|- +||-+++.++.++..++..+...+....
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 3566777888888888888888888888888999999999995 6799999999999888866555433222
Q ss_pred -----------------HHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhh
Q psy10938 118 -----------------VFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLAC 180 (314)
Q Consensus 118 -----------------~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (314)
.+..+.-+..+|.|+ .++.-..--.|.++....+ .......-..+...-...+.
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg---~r~~~~~fGadQfd~~~~~------~~~~~~~fFnW~yf~~~~g~ 207 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGG---IRPCLLAFGADQFDELDPV------EVKGIPSFFNWFYFSQNGGA 207 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCC---CCCcchhhcccccCccCcc------hhhCcccchhHHHHHHHHHH
Confidence 344445555556651 1111111111111110000 00112334455666667777
Q ss_pred hhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy10938 181 IPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV 217 (314)
Q Consensus 181 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 217 (314)
.++..+..++-|..++..-.-+......++++++...
T Consensus 208 l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 208 LLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 7777788888888888877777777777666665443
No 277
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.36 E-value=4.4 Score=36.88 Aligned_cols=103 Identities=8% Similarity=0.057 Sum_probs=70.8
Q ss_pred hhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--c-------ch----------------------hHHHHHH
Q psy10938 179 ACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV--Q-------TS----------------------TQNLILS 227 (314)
Q Consensus 179 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~-------~~----------------------~~~~~~~ 227 (314)
..++...+-.++.+++++.+++..........+.++.+. | +. |......
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 445556778899999999998776665555555544332 1 11 1111222
Q ss_pred HHHHHhhhhhch-hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy10938 228 CIFEALTGCCIS-VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLID 281 (314)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~ 281 (314)
+..........+ ..+.++.|....++..+-+++....+++|.++++.+..++.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222323333344 458999999999999999999999999999999999888877
No 278
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=89.98 E-value=0.53 Score=41.16 Aligned_cols=112 Identities=10% Similarity=-0.049 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHhHHHHhhh---------HHHHHHHHHHHhhcccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCC
Q psy10938 94 ITLIGALLVDGLCGIASSVAQ---------YYGVFLALRFINGFASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGE 164 (314)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
|.+.++.++..+|.++..++. +.+.++++-.+.++|.| --++....-..|..++.+..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G---~~K~ni~~~~~dq~~~~~~~~--------- 69 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTG---GIKPNISPFGADQYDEDDDSR--------- 69 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHH---CCHHHHHHHHHHCSSTTTTTH---------
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccc---cccccHHHHHHHHhcccchhh---------
Confidence 567888888888888844432 23568888888899988 222222222333333221000
Q ss_pred CChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy10938 165 VNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV 217 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 217 (314)
....-.+.....+++..++....+++.|++|+...+.+..+.+.++++.+...
T Consensus 70 ~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 70 RDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 12233466778888999999999999999999999888888888888776554
No 279
>KOG3810|consensus
Probab=89.70 E-value=0.21 Score=42.51 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=80.9
Q ss_pred HHHHHhhhhhHHhHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 173 TLIIGLACIPSSLAMPLLVHKMGAK--WFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
-.+..+.+.++.+..|.+.-++.|. ..+..+....+-..+.+...++.|..++...++........++...-+++...
T Consensus 277 eAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~ 356 (433)
T KOG3810|consen 277 EAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLS 356 (433)
T ss_pred HHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhh
Confidence 3455566677777788776555544 34445555555555666667777887777777777777777777767777777
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh------------HHHHHHHHHHHHHHHHHHHhc
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC------------LILICTLAAMLLIAGVFSMFL 305 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 305 (314)
.+.-|-.+|+..++.-+-..+-..+ ..|..| ..-|.+.+++.++...+....
T Consensus 357 ~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 357 SELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 7777888887776655444433332 233222 123666777777765554433
No 280
>PRK03612 spermidine synthase; Provisional
Probab=89.28 E-value=18 Score=33.40 Aligned_cols=132 Identities=13% Similarity=0.113 Sum_probs=68.6
Q ss_pred cccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHH-HHHHHH-HHhHHHHhhhHH-----HHHHHHHHHhhc
Q psy10938 56 CDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIG-ALLVDG-LCGIASSVAQYY-----GVFLALRFINGF 128 (314)
Q Consensus 56 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~-~~~~~~~~~~~~-----~~l~~~r~l~G~ 128 (314)
.-+|-+..+.+.+.+++..|.++|+..++++.++--|+....- ...+.+ ++..+......+ ..++..-++.++
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788889999999999999999999988744333332211 111111 111111111111 111222334444
Q ss_pred ccCCCCCCCcccchhhhhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHH-HHHhhhHHHHHHH
Q psy10938 129 ASRPLIPGHPGKVASVCDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLL-VHKMGAKWFLVAG 203 (314)
Q Consensus 129 ~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l-~d~~g~~~~~~~~ 203 (314)
..| ..-+-..+....... .......+.......+++++|+++.+++ ...+|-.......
T Consensus 123 l~G-------~~~Pl~~~~~~~~~~---------~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~ 182 (521)
T PRK03612 123 LIG-------MEIPLLMRILQRIRD---------QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALT 182 (521)
T ss_pred HHH-------HHHHHHHHHHHhccc---------cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 444 010000111111000 0034456777888889999999998864 4578865544433
No 281
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=87.02 E-value=2.2 Score=38.12 Aligned_cols=83 Identities=12% Similarity=0.096 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHh
Q psy10938 28 ILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCG 107 (314)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 107 (314)
.-++...++..+.++....+......+.+.-|+++..+|..-+...+....+.+...++.+|+|..|.-.++........
T Consensus 258 q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 258 QPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 34555555555555554455555555555569999999999999999999999999999999999988888877665544
Q ss_pred HHH
Q psy10938 108 IAS 110 (314)
Q Consensus 108 ~~~ 110 (314)
.++
T Consensus 338 ~~~ 340 (432)
T PF06963_consen 338 ALC 340 (432)
T ss_pred HHH
Confidence 443
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.75 E-value=3.1 Score=37.37 Aligned_cols=108 Identities=16% Similarity=0.081 Sum_probs=68.8
Q ss_pred hHHHHHHHHHhhhhhHHhHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHH------------HhcchhHHHHHHHHHHHhh
Q psy10938 168 EVFSHTLIIGLACIPSSLAMPLLVHKMGAK-WFLVAGLVLSSGVAMALY------------YVQTSTQNLILSCIFEALT 234 (314)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 234 (314)
..-.....++++..+|+.+..+..- -++| +.+.+..+.=.+...++. +.++.+..++..+++++..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 3445667778888888886654311 1122 122222333233222222 2235566677788888888
Q ss_pred hhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 235 GCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
|-..+..+.+.++..++++|..+-.+...+-.+|-.+|..+.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999999988888887777777777777776654
No 283
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=84.92 E-value=14 Score=32.68 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=67.6
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeeccccc
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFP 250 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (314)
.....-.+-.++..++..++.+|+..+.-......++.+++++..+.++.+.-+....+.++..+..-....++.. .+|
T Consensus 63 ~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 63 AVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 3344444556677788999999987655555666677778887777777666555555555544444444444433 444
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh---HHHHHHHHHHH
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC---LILICTLAAML 295 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~---~~~~~~~~~~~ 295 (314)
+. ..+-..+....++.+|+...-.+.+ .+ ...+.....+.
T Consensus 142 ~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp 184 (402)
T PF02487_consen 142 KS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLP 184 (402)
T ss_pred cc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHH
Confidence 32 2333333344556666666544444 33 33444444443
No 284
>KOG1237|consensus
Probab=82.97 E-value=22 Score=33.17 Aligned_cols=133 Identities=11% Similarity=-0.023 Sum_probs=79.5
Q ss_pred hHHHHHHHHHhhhhhHHhHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhcch--------------------h-----
Q psy10938 168 EVFSHTLIIGLACIPSSLAMPLLVHKM-GAKWFLVAGLVLSSGVAMALYYVQTS--------------------T----- 221 (314)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~----- 221 (314)
.+.-....+.......++.+++++|.+ ||-+++.++..+..++..++...... .
T Consensus 74 ~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~ 153 (571)
T KOG1237|consen 74 GAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLA 153 (571)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHH
Confidence 334444555555666778899999975 88888888888877776554332100 0
Q ss_pred HHHHHHHHHHHhhhhhchhheeeecccccc---hh-h--HHHHHHHHhhhhhhhhhHHHHHHHHHhhhh-HHHHHHHHHH
Q psy10938 222 QNLILSCIFEALTGCCISVVYCIMVDLFPT---NL-R--VLAAALSSTFGRFGGLTGNLMFGFLIDGHC-LILICTLAAM 294 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~-r--~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~-~~~~~~~~~~ 294 (314)
..+...-+...+.++.-+...++-+|-+++ +. + ..-+.......+.|..++-.+.-++-|..+ ...+.+..+.
T Consensus 154 ~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 154 VLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVL 233 (571)
T ss_pred HHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHH
Confidence 112222223336677778888899998883 22 2 244455555566777777777766666655 3344444444
Q ss_pred HHHHHH
Q psy10938 295 LLIAGV 300 (314)
Q Consensus 295 ~~~~~~ 300 (314)
..++.+
T Consensus 234 ~~lai~ 239 (571)
T KOG1237|consen 234 NALAIL 239 (571)
T ss_pred HHHHHH
Confidence 444433
No 285
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.66 E-value=66 Score=29.53 Aligned_cols=89 Identities=8% Similarity=-0.019 Sum_probs=50.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHH-HHHHhhhhhhhcccccchhHHHHHHHH
Q psy10938 23 GKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPML-GMVFGSYFWGCLADTQGRKITLIGALL 101 (314)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~ 101 (314)
.+..+..++.+.+..++..+.....-..=..+.-+ ..+++.+..+=....+ ...+......+++|+++|++++-+...
T Consensus 19 ~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~ 97 (491)
T PF03219_consen 19 HRSELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIII 97 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34455555555555555555443332221111111 1144455555444444 344556778999999999999887777
Q ss_pred HHHHHhHHHHh
Q psy10938 102 VDGLCGIASSV 112 (314)
Q Consensus 102 ~~~~~~~~~~~ 112 (314)
.+.....++++
T Consensus 98 ~F~~fF~~f~~ 108 (491)
T PF03219_consen 98 PFLGFFALFAF 108 (491)
T ss_pred HHHHHHHHHHH
Confidence 77766666554
No 286
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=75.04 E-value=67 Score=29.31 Aligned_cols=104 Identities=9% Similarity=-0.002 Sum_probs=73.2
Q ss_pred hhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc---------c-----------------------hhHHHHH
Q psy10938 179 ACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQ---------T-----------------------STQNLIL 226 (314)
Q Consensus 179 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-----------------------~~~~~~~ 226 (314)
.+++..++..++.+++.+.+++.........+++++.++- + .|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 5666777888999999999888777766666666654431 1 1222222
Q ss_pred HHHHHHhhhhhch-hheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh
Q psy10938 227 SCIFEALTGCCIS-VVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG 282 (314)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~ 282 (314)
..+.........+ ..+....|....++..+-+++.+...+++..++..+...+.++
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333333333333 4578899999989999999999999999999999988888774
No 287
>KOG4332|consensus
Probab=74.56 E-value=6.6 Score=32.67 Aligned_cols=121 Identities=11% Similarity=-0.013 Sum_probs=60.8
Q ss_pred CCCChhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhhe
Q psy10938 163 GEVNPEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVY 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+....+.+..........++...+.|-++||.|||+......+...++++. -..+..-..++.-.+.|......++..-
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaTsLLFSaFE 146 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIATSLLFSAFE 146 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHHHHHHHHHH
Confidence 344445554444333444555567888999999998765555444444433 1222222233333334433333333332
Q ss_pred e-eecccc-----cchhhHHHHHHHHhhhh-hhhhhHHHHHHHHHhhhh
Q psy10938 243 C-IMVDLF-----PTNLRVLAAALSSTFGR-FGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 243 ~-~~~~~~-----p~~~r~~~~g~~~~~~~-~g~~~~p~~~g~l~~~~~ 284 (314)
+ +++|.. |++-.....+-...+++ +-.+++...+-.+.|..+
T Consensus 147 sWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~s 195 (454)
T KOG4332|consen 147 SWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFS 195 (454)
T ss_pred HHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhc
Confidence 1 344443 33333444444443333 556666666667777654
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=73.41 E-value=1 Score=38.30 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=3.5
Q ss_pred HHHHHHhhhhhHHhHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHH-------------hcchhHHHHHHHHHHHhhhhh
Q psy10938 172 HTLIIGLACIPSSLAMPLLVHKM-GAKWFLVAGLVLSSGVAMALYY-------------VQTSTQNLILSCIFEALTGCC 237 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 237 (314)
....++++..+|+.+..+..-+. .+|++. ...+.-.+...++.. .++.+..++..+++++..|-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45678889999999888753221 234333 332222222222211 224455566677788888888
Q ss_pred chhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 238 ISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 238 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
.+..+.+.++..++++|..+-.+...+-..|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999988887777777777777777776654
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.89 E-value=42 Score=27.74 Aligned_cols=107 Identities=10% Similarity=0.051 Sum_probs=53.6
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHH-hhhHHHHHHH----HHHHHHHHHHHHHh-cc----hhHHHHHHHHHHHhhhhhchh
Q psy10938 171 SHTLIIGLACIPSSLAMPLLVHK-MGAKWFLVAG----LVLSSGVAMALYYV-QT----STQNLILSCIFEALTGCCISV 240 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~----~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~ 240 (314)
....++..+..+|....|..... +.||+.+... .++..++.++.... ++ ....+++.++.|++.-+..++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34445555555666666666553 3455544322 22222222222111 22 223445555666666666666
Q ss_pred heeeeccc--ccchhhHHHHHHHHhhhhhhhhhHHHHHH
Q psy10938 241 VYCIMVDL--FPTNLRVLAAALSSTFGRFGGLTGNLMFG 277 (314)
Q Consensus 241 ~~~~~~~~--~p~~~r~~~~g~~~~~~~~g~~~~p~~~g 277 (314)
......|. ..|+.-|...|+.-.++++.-.+.-.+..
T Consensus 225 iL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S 263 (267)
T PF07672_consen 225 ILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILS 263 (267)
T ss_pred HhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 66666665 23445566677666666655554444443
No 290
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=72.78 E-value=76 Score=28.96 Aligned_cols=88 Identities=11% Similarity=0.004 Sum_probs=55.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc---ccchhhHHhHhhHH-HHHHhhhhhhhcccccchhHHHH
Q psy10938 22 YGKFHYILVIFGGLLYAYAAISITVLSFVLPSAQCDFGM---TSSDKGWLNAAPML-GMVFGSYFWGCLADTQGRKITLI 97 (314)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~ 97 (314)
.+|+.+..++.+.+..+...+... ++-.+.+++.+ +++.+.++=+..-+ +..+..++.+++.+++.|.+++-
T Consensus 21 i~r~E~~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~ 96 (509)
T COG3202 21 IRRYELKKFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFY 96 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHH
Confidence 344445545444444444444333 23344555544 44556677676666 67788889999999999999988
Q ss_pred HHHHHHHHHhHHHHhh
Q psy10938 98 GALLVDGLCGIASSVA 113 (314)
Q Consensus 98 ~~~~~~~~~~~~~~~~ 113 (314)
.-+..+....+++++.
T Consensus 97 ~~~~~F~~fF~LFa~V 112 (509)
T COG3202 97 IILGFFLGFFALFAFV 112 (509)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777666666543
No 291
>KOG3810|consensus
Probab=71.30 E-value=14 Score=32.06 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=76.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhh
Q psy10938 186 AMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFG 265 (314)
Q Consensus 186 ~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 265 (314)
..=.+.|....|.+++.-.+....+..++.+.++.+..-++-+..|. ....--.-++++-+.++++++-++.|.+....
T Consensus 61 pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~-~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~ 139 (433)
T KOG3810|consen 61 PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGP-ATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAF 139 (433)
T ss_pred HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcCh-HHHHHHhhhheeeeecCHHHHHHHHHHhHHHH
Confidence 34456788777887777766667777777777776554443333332 12223335778888899999999999999888
Q ss_pred hhhhhhHHHHHHHHHhhhh--HHHH-HHHHHHHHHHHHHHHhcccCC
Q psy10938 266 RFGGLTGNLMFGFLIDGHC--LILI-CTLAAMLLIAGVFSMFLPATG 309 (314)
Q Consensus 266 ~~g~~~~p~~~g~l~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 309 (314)
-.|-..+..+.-.+.+... .... .+.-....++.....++|..+
T Consensus 140 L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 140 LVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 7777777777655555432 1111 122222333445556676554
No 292
>KOG0637|consensus
Probab=69.42 E-value=29 Score=31.29 Aligned_cols=66 Identities=18% Similarity=0.068 Sum_probs=55.7
Q ss_pred HHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCC
Q psy10938 67 WLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRP 132 (314)
Q Consensus 67 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~P 132 (314)
|=..++.+...+.+....++.||+|-|+.+..+...+.++..+.+..++.+....-+-..|+-.+|
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~ 401 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSP 401 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecc
Confidence 445567777788999999999999988888888887888888999999999999999999976663
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.65 E-value=15 Score=25.47 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=27.5
Q ss_pred chhhHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh
Q psy10938 251 TNLRVLAAALSSTFGRFGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 251 ~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~~~ 284 (314)
++.++.+.++-...-.+++++.....|++.|++-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566788888887778888888888899999864
No 294
>KOG3574|consensus
Probab=59.34 E-value=26 Score=30.97 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=41.3
Q ss_pred HhHHHHHHH-----HhhhHHHHHH-HHHHHHHHHHHHHHhcch-----------hHHHHHHHHHHHhhhhhchhheeeec
Q psy10938 184 SLAMPLLVH-----KMGAKWFLVA-GLVLSSGVAMALYYVQTS-----------TQNLILSCIFEALTGCCISVVYCIMV 246 (314)
Q Consensus 184 ~~~~g~l~d-----~~g~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.+++..++| |+|||+..+. +..+.+..+..+....+. ......+++..+....---....+..
T Consensus 80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL 159 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL 159 (510)
T ss_pred HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 345666777 9999875432 333333344443332211 11111222333222221222344555
Q ss_pred ccccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 247 DLFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 247 ~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
.+..+++-|-+........+.|.+++..+.
T Consensus 160 tmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 160 TMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 556666655554444444445555544433
No 295
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=57.63 E-value=1.5e+02 Score=26.82 Aligned_cols=28 Identities=11% Similarity=0.127 Sum_probs=16.0
Q ss_pred HHHHHHHHhhhhhchhheeeecccccchh
Q psy10938 225 ILSCIFEALTGCCISVVYCIMVDLFPTNL 253 (314)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 253 (314)
...++.+++.+...+..+++.+. +|++.
T Consensus 111 ~~v~~~g~~~~~~q~s~~gla~~-fp~~~ 138 (437)
T TIGR00939 111 ASVVIINSGMALLQGSLFGLAGV-FPSTY 138 (437)
T ss_pred HHHHHHHhhhhhhcccchhhccc-CCHHH
Confidence 34444555556666666666664 56554
No 296
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=54.44 E-value=38 Score=26.34 Aligned_cols=24 Identities=17% Similarity=0.519 Sum_probs=21.1
Q ss_pred hHhhHHHHHHhhhhhhhcccccch
Q psy10938 69 NAAPMLGMVFGSYFWGCLADTQGR 92 (314)
Q Consensus 69 ~s~~~~~~~i~~~~~g~l~dr~Gr 92 (314)
+.-|.+++.+.+.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456788999999999999999986
No 297
>COG2119 Predicted membrane protein [Function unknown]
Probab=54.29 E-value=1e+02 Score=23.96 Aligned_cols=37 Identities=19% Similarity=0.081 Sum_probs=27.0
Q ss_pred HHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy10938 175 IIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVA 211 (314)
Q Consensus 175 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 211 (314)
...+.+.++.+.+.++++|+..|++-..+.++..+..
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 3445677788889999999999888776665554443
No 298
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=52.63 E-value=24 Score=24.44 Aligned_cols=51 Identities=18% Similarity=-0.008 Sum_probs=40.3
Q ss_pred chhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 63 SDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 63 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
+..|=..+.|.-.+.+.++.+++..|+.-+.+-=.++..+..++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456778899999999999999999999988777677777766666554443
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.95 E-value=44 Score=23.26 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=24.9
Q ss_pred hHHhHhhHHHHHHhhhhhhhccccc-chhHHHHHHHHHH
Q psy10938 66 GWLNAAPMLGMVFGSYFWGCLADTQ-GRKITLIGALLVD 103 (314)
Q Consensus 66 g~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~ 103 (314)
..-.+.-+++..+.....||+.||| |.++..++..++.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 4445666777777778889999985 5665544444333
No 300
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=49.92 E-value=55 Score=24.44 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=28.2
Q ss_pred hHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHH
Q psy10938 69 NAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIAS 110 (314)
Q Consensus 69 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 110 (314)
+.-|.+++.+.+.+.|++.+|..+++..........++....
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 456788999999999999999887643333333333343333
No 301
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=49.51 E-value=1.3e+02 Score=23.76 Aligned_cols=30 Identities=13% Similarity=0.093 Sum_probs=15.1
Q ss_pred hhhhhhHHHHHHHHHhhhhHHHHHHHHHHH
Q psy10938 266 RFGGLTGNLMFGFLIDGHCLILICTLAAML 295 (314)
Q Consensus 266 ~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~ 295 (314)
.++-..|..+++.+.+..+....++.+.+.
T Consensus 172 i~~f~~Ga~~ga~l~~~~~~~al~~~~~~l 201 (209)
T PF06912_consen 172 ILSFFIGAILGALLYRRLGFWALLLPALLL 201 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 344445555555556665544444444333
No 302
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=47.35 E-value=1.6e+02 Score=27.14 Aligned_cols=53 Identities=11% Similarity=0.109 Sum_probs=42.3
Q ss_pred HHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHHHhh
Q psy10938 230 FEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFLIDG 282 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l~~~ 282 (314)
..+.....+....++.+++.+|..-|+.+.+.|+..++|+-.-..+.=++.|.
T Consensus 415 ~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 415 SSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 33445555666788999999999999999999999999998877776667653
No 303
>PRK02237 hypothetical protein; Provisional
Probab=45.94 E-value=42 Score=23.39 Aligned_cols=50 Identities=18% Similarity=-0.087 Sum_probs=39.5
Q ss_pred hhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhh
Q psy10938 64 DKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVA 113 (314)
Q Consensus 64 ~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 113 (314)
..|=..+.|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 37788899999999999999999999887776667777666666555443
No 304
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=45.21 E-value=1.2e+02 Score=25.24 Aligned_cols=65 Identities=17% Similarity=0.204 Sum_probs=37.2
Q ss_pred hHHhHhhHHHHHHhhhhhhhcccc-cchhHHHH----HHHHHHHHHhHHHHh-h----hHHHHHHHHHHHhhccc
Q psy10938 66 GWLNAAPMLGMVFGSYFWGCLADT-QGRKITLI----GALLVDGLCGIASSV-A----QYYGVFLALRFINGFAS 130 (314)
Q Consensus 66 g~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~ 130 (314)
....-++..|+.+|....|..... +.||+.+. .+.++..++.+.... . .+...+++.-|+.|++.
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 445566677777888888888774 55666443 233444444443211 1 13555677777777653
No 305
>COG3619 Predicted membrane protein [Function unknown]
Probab=42.40 E-value=1.8e+02 Score=23.49 Aligned_cols=48 Identities=17% Similarity=0.063 Sum_probs=25.9
Q ss_pred HHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccc
Q psy10938 260 LSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLIAGVFSMFLPA 307 (314)
Q Consensus 260 ~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (314)
.......++-++|...++.+....+....|..+.+.+.........++
T Consensus 172 ~~~~~~il~f~~GAi~g~ll~~~~g~~al~~~~~~i~~~~~~~~~~~~ 219 (226)
T COG3619 172 LIYLSLILSFIVGAICGALLTLFFGLKALWVVAALILAVYLLALFDLR 219 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 334444556666666666666666666666655554444443333333
No 306
>KOG3880|consensus
Probab=41.82 E-value=53 Score=28.17 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=44.8
Q ss_pred HHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhhhHHHHH
Q psy10938 213 ALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMF 276 (314)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~ 276 (314)
...+.++.+..+++.+.-|...+..+...+--+.+-.+++.|-.+++.....-.+|-.++..+.
T Consensus 335 ~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 335 WYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 3456677777776666667666666666666666666788898888888777777766665554
No 307
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=40.85 E-value=1.4e+02 Score=22.50 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=26.8
Q ss_pred HHHhhhhhchhheeeecccccchhhHHHHHHHHhhhhhhhh
Q psy10938 230 FEALTGCCISVVYCIMVDLFPTNLRVLAAALSSTFGRFGGL 270 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~g~~ 270 (314)
+.++..+...+.|..++-..+++..|...|+-..-.+++..
T Consensus 104 ~~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 104 LVFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 33344445556666667677777778888888777766544
No 308
>KOG4830|consensus
Probab=40.84 E-value=10 Score=31.38 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhc---------ccccchhHHH-HHHHHH
Q psy10938 33 GGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCL---------ADTQGRKITL-IGALLV 102 (314)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l---------~dr~Grr~~l-~~~~~~ 102 (314)
-..+.+.+-.....+...+-.+.++.|.++.....++-+..+.-++..++.|.. .||+|||+.. ..+.++
T Consensus 22 yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~l 101 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTVL 101 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccEE
Confidence 345555555555555555555567788888888888888888888888888744 4699998864 333332
Q ss_pred HHHH---------hHHHHh----hhHHHHHHHHHHHhhcccC
Q psy10938 103 DGLC---------GIASSV----AQYYGVFLALRFINGFASR 131 (314)
Q Consensus 103 ~~~~---------~~~~~~----~~~~~~l~~~r~l~G~~~~ 131 (314)
..++ .+.+.. .-|..++.+.-.+.|++-+
T Consensus 102 VslSf~~ifg~a~iF~~~~~~s~vanlglyaialvVFgv~~A 143 (412)
T KOG4830|consen 102 VSLSFPMIFGFAKIFLCKSTTSEVANLGLYAIALVVFGVGWA 143 (412)
T ss_pred EEEechhhcCceeEEeeccHHHHHHHhHHHHHHhheeeeeee
Confidence 2221 111111 2356667777777788776
No 309
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=38.59 E-value=3.3e+02 Score=25.29 Aligned_cols=38 Identities=11% Similarity=-0.057 Sum_probs=21.3
Q ss_pred eeeecccccchhhHHHHHHHHhhhhhhhhhHHHHHHHH
Q psy10938 242 YCIMVDLFPTNLRVLAAALSSTFGRFGGLTGNLMFGFL 279 (314)
Q Consensus 242 ~~~~~~~~p~~~r~~~~g~~~~~~~~g~~~~p~~~g~l 279 (314)
..+...+..+++++-+..-.....+.|..++-.++=.+
T Consensus 140 DGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 140 DGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred ehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 45556666777776655544444446666655554333
No 310
>COG4769 Predicted membrane protein [Function unknown]
Probab=38.26 E-value=31 Score=26.09 Aligned_cols=50 Identities=12% Similarity=0.060 Sum_probs=33.8
Q ss_pred hHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhh
Q psy10938 72 PMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFING 127 (314)
Q Consensus 72 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 127 (314)
+.+..++.+...-++..++|+|.+=.++.-. ..++.+|..++.+.+++.+
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~ 131 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVF 131 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHh
Confidence 3444455555666778888888764444332 3457889999999998775
No 311
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=34.53 E-value=1.6e+02 Score=20.38 Aligned_cols=33 Identities=3% Similarity=-0.024 Sum_probs=15.9
Q ss_pred HhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHH
Q psy10938 177 GLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSG 209 (314)
Q Consensus 177 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 209 (314)
.+..++|..++-|+-++++-...+.+.+++.++
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 344444555555555566654444333433333
No 312
>KOG3880|consensus
Probab=32.35 E-value=1.1e+02 Score=26.35 Aligned_cols=132 Identities=13% Similarity=0.016 Sum_probs=80.5
Q ss_pred hhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHhhcccCCCCCCCcccchhh
Q psy10938 65 KGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIASSVAQYYGVFLALRFINGFASRPLIPGHPGKVASV 144 (314)
Q Consensus 65 ~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~Pl~~~~~~~~~~~ 144 (314)
.|.+.-+-.+...+-.+.+....||+---.=..+..++.+.+.++.+++++.++=+++-.+..++.| -.+...
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissG-------lGEiTF 136 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSG-------LGEITF 136 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCC-------cceeeh
Confidence 4555556666677777778888888664444455667778888999999999998888888877776 111111
Q ss_pred hhhhcCCcCCCcCcccccCCCChhHHHHHHHHHhhhhhHHhHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHH
Q psy10938 145 CDVSALQPADNSTVATCSGEVNPEVFSHTLIIGLACIPSSLAMPLLVH--KMGAKWFLVAGLVLSSGVAMALYY 216 (314)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~~~~~~~~~~~~~~~~~~~~~ 216 (314)
......- .........+..+.++++|...-..+.+ .+.+|.++.+...+-++..+...+
T Consensus 137 L~lss~Y-------------~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 137 LALSSRY-------------PSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred hhhhccC-------------CCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 1111100 0111111222333445566666666666 456888888877777666665544
No 313
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=31.59 E-value=2e+02 Score=20.76 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhc
Q psy10938 35 LLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCL 86 (314)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l 86 (314)
.+.++-......+..-..+...|-.++..+.-|=.-+|.+.+.+-++-+|++
T Consensus 50 AG~vLw~vM~~iFd~CIDsWkAdpeLnn~rymWNilMYaIPy~L~Ala~GFl 101 (141)
T PRK13743 50 AGIVLWVIMHSIFDACIDSWKADPELNNFRYMWNILMYVIPYTLWALAAGFL 101 (141)
T ss_pred hhHHHHHHHHHHHHHHHHhhhcChhhhhHHHHHHHHHHHHHHHHHHHHhchh
Confidence 3333333334444444555555544444444454555555555555544443
No 314
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=31.29 E-value=1.5e+02 Score=19.73 Aligned_cols=41 Identities=10% Similarity=-0.084 Sum_probs=27.4
Q ss_pred HHHhhhhhhhcccccch-------hHHHHHHHHHHHHHhHHHHhhhHH
Q psy10938 76 MVFGSYFWGCLADTQGR-------KITLIGALLVDGLCGIASSVAQYY 116 (314)
Q Consensus 76 ~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 116 (314)
.....+.++++.+|..+ ++.+.++.++...+.++++..+|.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445555566665554 778888888888888887776654
No 315
>KOG4112|consensus
Probab=31.22 E-value=1.7e+02 Score=19.84 Aligned_cols=38 Identities=13% Similarity=0.327 Sum_probs=22.4
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHHHHHHHHH
Q psy10938 259 ALSSTFGRFGGLTGNLMFGFLIDGHCLILICTLAAMLLI 297 (314)
Q Consensus 259 g~~~~~~~~g~~~~p~~~g~l~~~~~~~~~~~~~~~~~~ 297 (314)
-....+-.+++++| .+.|+..+..+...+.+.+.+.+-
T Consensus 26 r~~q~ilti~aiVg-~i~Gf~~Qqls~tvy~vg~~~v~t 63 (101)
T KOG4112|consen 26 RFQQLILTIGAIVG-FIYGFAQQQLSVTVYIVGAGFVFT 63 (101)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555556555 556788887776666665554433
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=29.36 E-value=93 Score=21.66 Aligned_cols=51 Identities=14% Similarity=0.028 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy10938 167 PEVFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV 217 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 217 (314)
.+.+-....++-..++.+++.++..|+..+.+.=.++..++.+...++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445556777777788889999999999876666556666666555554443
No 317
>KOG2601|consensus
Probab=29.08 E-value=1.5e+02 Score=26.36 Aligned_cols=81 Identities=16% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccc-ccchhhHHhHhhHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 31 IFGGLLYAYAAISITVLSFVLPSAQCDFGM-TSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
+.+.+++++..++.-++......+..+++- |....+.-.-.-.....+..++.|...|+..|+|++-..+.+.-++.+.
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Q ss_pred HH
Q psy10938 110 SS 111 (314)
Q Consensus 110 ~~ 111 (314)
++
T Consensus 110 ag 111 (503)
T KOG2601|consen 110 AG 111 (503)
T ss_pred HH
No 318
>KOG2881|consensus
Probab=27.49 E-value=1.1e+02 Score=25.30 Aligned_cols=27 Identities=22% Similarity=0.093 Sum_probs=16.9
Q ss_pred hhhcccccchhHHHHHHHHHHHHHhHH
Q psy10938 83 WGCLADTQGRKITLIGALLVDGLCGIA 109 (314)
Q Consensus 83 ~g~l~dr~Grr~~l~~~~~~~~~~~~~ 109 (314)
...++=|++|+.++.-++.-..+-+++
T Consensus 89 AAlmAmr~~R~~Vf~Ga~~AL~lMTiL 115 (294)
T KOG2881|consen 89 AALMAMRYPRLTVFSGAMSALALMTIL 115 (294)
T ss_pred HHHHHhhccchhHHHHHHHHHHHHHHH
Confidence 344556899998887665544444444
No 319
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=26.20 E-value=2.8e+02 Score=24.42 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=34.9
Q ss_pred HHHHHhhccccccccccccchhhHHhHhhHHHHH---HhhhhhhhcccccchhHHHHHHHHHHHHH
Q psy10938 44 ITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMV---FGSYFWGCLADTQGRKITLIGALLVDGLC 106 (314)
Q Consensus 44 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~---i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 106 (314)
.-.....+....+++|+++.-.|.+.. .++.. +.++-. ...||..|---+..|..+..++
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvIIa--iv~~apE~~tAV~a-A~kNkmq~slnialGSsLq~il 300 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLVA--LLILSPEGLGALKA-VLNNQVQRAMNLFFGSVLATIS 300 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHHH--HHHcchhHHHHHHH-HHcCchHHHHHHHHHHHHHHHH
Confidence 344556677888899999999998763 33322 222222 2456665555555555544443
No 320
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=25.81 E-value=2.8e+02 Score=20.48 Aligned_cols=23 Identities=26% Similarity=0.397 Sum_probs=17.6
Q ss_pred ecccccchhhHHHHHHHHhhhhh
Q psy10938 245 MVDLFPTNLRVLAAALSSTFGRF 267 (314)
Q Consensus 245 ~~~~~p~~~r~~~~g~~~~~~~~ 267 (314)
+.|++|+..|..+.+..+...+.
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 57899999998888777755443
No 321
>PRK02237 hypothetical protein; Provisional
Probab=25.00 E-value=1.8e+02 Score=20.40 Aligned_cols=49 Identities=12% Similarity=0.030 Sum_probs=33.9
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Q psy10938 169 VFSHTLIIGLACIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYV 217 (314)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 217 (314)
.+-....++-..++.+++.++..|+..+-+.=.++..++.+...++.+.
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 5556677777788888999999999876655556666665555554443
No 322
>PRK10263 DNA translocase FtsK; Provisional
Probab=25.00 E-value=8.3e+02 Score=25.87 Aligned_cols=18 Identities=28% Similarity=0.254 Sum_probs=11.3
Q ss_pred hhhhhHHHHHHHHHhhhh
Q psy10938 267 FGGLTGNLMFGFLIDGHC 284 (314)
Q Consensus 267 ~g~~~~p~~~g~l~~~~~ 284 (314)
.|+++|-.+...+....|
T Consensus 142 gGGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred ccchHHHHHHHHHHHHHh
Confidence 466666666666666555
No 323
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=23.57 E-value=3.7e+02 Score=21.15 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=17.5
Q ss_pred HHHHHHhhhhhHHhHHHHHHHHhhhHHHH
Q psy10938 172 HTLIIGLACIPSSLAMPLLVHKMGAKWFL 200 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 200 (314)
......++-..|..+++.+.++++.+..+
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~al~ 195 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFWALL 195 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 34444555666777777777777754333
No 324
>KOG3097|consensus
Probab=23.55 E-value=4.3e+02 Score=23.15 Aligned_cols=69 Identities=19% Similarity=0.179 Sum_probs=43.2
Q ss_pred hhhHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhchhheeeecccc
Q psy10938 180 CIPSSLAMPLLVHKMGAKWFLVAGLVLSSGVAMALYYVQTSTQNLILSCIFEALTGCCISVVYCIMVDLF 249 (314)
Q Consensus 180 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
-+..+++.+.+.+++|-|+++.++.......... -+.+.....+......|++.+..+...-+|+++.-
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3445566669999999999987665544433222 22233334455566677777777777777777664
No 325
>KOG1479|consensus
Probab=22.11 E-value=5.8e+02 Score=22.88 Aligned_cols=31 Identities=16% Similarity=0.317 Sum_probs=17.3
Q ss_pred HHHHHHHHHhhhhhchhheeeecccccchhhH
Q psy10938 224 LILSCIFEALTGCCISVVYCIMVDLFPTNLRV 255 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~ 255 (314)
.....+.+.+.+...+..+...++ +|++...
T Consensus 121 ~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytq 151 (406)
T KOG1479|consen 121 LIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQ 151 (406)
T ss_pred HHHHHHHhhhhhhhccchhhhhhc-CCHHHHH
Confidence 334444555555556666666666 4666543
No 326
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=21.88 E-value=2.5e+02 Score=19.42 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=12.4
Q ss_pred hhhhhhhccc-ccchhHHHHHHHHHHH
Q psy10938 79 GSYFWGCLAD-TQGRKITLIGALLVDG 104 (314)
Q Consensus 79 ~~~~~g~l~d-r~Grr~~l~~~~~~~~ 104 (314)
...+.|...| +|+-++.+.+..++.+
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3344454455 4665554444444433
No 327
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=21.84 E-value=3.7e+02 Score=20.59 Aligned_cols=67 Identities=15% Similarity=0.031 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHhHhhHHHHHH----hhhhhhhcccccchhH
Q psy10938 27 YILVIFGGLLYAYAAISITVLSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVF----GSYFWGCLADTQGRKI 94 (314)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i----~~~~~g~l~dr~Grr~ 94 (314)
...+.-.+...+.|......+..+.+.+..+ +.+..+.........++... .....+.+.+|+.+|+
T Consensus 98 ~~~f~~g~~~~~~NPk~il~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 168 (191)
T PF01810_consen 98 SKSFLTGFLLNLLNPKAILFWLAVFPQFISP-EYSSTQFLVFILGIFLGSLLWFLLLALLGSRLRRKFSSRR 168 (191)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhhcccCc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3445555566677777666666667776665 33333333333333333333 3333444445554443
No 328
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=21.51 E-value=4e+02 Score=20.80 Aligned_cols=39 Identities=8% Similarity=-0.019 Sum_probs=27.5
Q ss_pred hHHHHHHhhhhhhhcccccchhHHHHHHHHHHHHHhHHH
Q psy10938 72 PMLGMVFGSYFWGCLADTQGRKITLIGALLVDGLCGIAS 110 (314)
Q Consensus 72 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 110 (314)
..+...++.++.=.+..|.+|+-.+.+...+.++...+.
T Consensus 39 p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~ 77 (189)
T TIGR02185 39 PGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLLFFLM 77 (189)
T ss_pred HHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHHHHHH
Confidence 455566777777788899998888877777766644433
No 329
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=20.35 E-value=90 Score=19.63 Aligned_cols=47 Identities=19% Similarity=0.214 Sum_probs=35.8
Q ss_pred HHhhccccccccccccchhhHHhHhhHHHHHHhhhhhhhcccccchh
Q psy10938 47 LSFVLPSAQCDFGMTSSDKGWLNAAPMLGMVFGSYFWGCLADTQGRK 93 (314)
Q Consensus 47 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~Grr 93 (314)
+....|.+.--+|.+..+.+.+.-...+...+-+.+..++-||+=+|
T Consensus 18 l~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 18 LLISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33445555556788888888888888888888899999999987654
No 330
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.23 E-value=1.9e+02 Score=16.68 Aligned_cols=18 Identities=17% Similarity=0.099 Sum_probs=13.8
Q ss_pred hhhhHHhHHHHHHHHhhh
Q psy10938 179 ACIPSSLAMPLLVHKMGA 196 (314)
Q Consensus 179 ~~~~~~~~~g~l~d~~g~ 196 (314)
.+++|+++++++.+.++.
T Consensus 3 ~GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 3 LGIIGAFVGGWLFGLLGI 20 (48)
T ss_pred eehHHHHHHHHHHHHhcc
Confidence 356788888888888776
No 331
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.00 E-value=2.6e+02 Score=18.02 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=25.2
Q ss_pred cccccchhHHHHHHHHHHHHHhHHHHhhhHHHHH
Q psy10938 86 LADTQGRKITLIGALLVDGLCGIASSVAQYYGVF 119 (314)
Q Consensus 86 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 119 (314)
--|+-.|++-+.+.+.+-..+.++..+....+++
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~l 43 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWL 43 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3467778888988888888888877777655333
Done!