BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10939
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27546|MAP4_MOUSE Microtubule-associated protein 4 OS=Mus musculus GN=Map4 PE=1 SV=3
Length = 1125
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
Query: 13 NGQIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKP 66
N QI+ +K+DI K SK GS N+KHKPGGG IE QKL+ K AQ+K+GSLDNV H P
Sbjct: 995 NVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLP 1054
Query: 67 GGGEKKI 73
GG K
Sbjct: 1055 AGGAVKT 1061
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDI-KAQSKIGSLDNVKHKPGGGEKKIFDDKDYLK 81
QSK GS DN+KH PGGG I+ +K+DI K SK GS N+KHKPGGG+ KI K K
Sbjct: 978 QSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFK 1037
Query: 82 QKA 84
+KA
Sbjct: 1038 EKA 1040
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 43/95 (45%)
Query: 22 DIKA-QSKIGSLDNVKHKPGGG---IEEQ------------------------------- 46
D+K+ +SK+GS +N+KH+PGGG +E++
Sbjct: 904 DLKSVRSKVGSTENIKHQPGGGRAKVEKKTEAATTAGKPEPNAVTKAAGSIASAQKPPAG 963
Query: 47 KLDIKA--------QSKIGSLDNVKHKPGGGEKKI 73
K+ I + QSK GS DN+KH PGGG +I
Sbjct: 964 KVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQI 998
>sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3
Length = 1152
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 6/66 (9%)
Query: 13 NGQIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKP 66
N QI+ +K+DI K SK GS N+KHKPGGG IE QKL+ K AQ+K+GSLDNV H P
Sbjct: 1022 NVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLP 1081
Query: 67 GGGEKK 72
GG K
Sbjct: 1082 AGGAVK 1087
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDI-KAQSKIGSLDNVKHKPGGGEKKIFDDKDYLK 81
QSK GS DN+KH PGGG I+ +K+DI K SK GS N+KHKPGGG+ KI K K
Sbjct: 1005 QSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFK 1064
Query: 82 QKA 84
+KA
Sbjct: 1065 EKA 1067
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 42/90 (46%)
Query: 26 QSKIGSLDNVKHKPGGGIE--EQKLDIKA------------------------------- 52
+SK+GS +N+KH+PGGG E+K + A
Sbjct: 936 RSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIV 995
Query: 53 ---------QSKIGSLDNVKHKPGGGEKKI 73
QSK GS DN+KH PGGG +I
Sbjct: 996 SKKVSYSHIQSKCGSKDNIKHVPGGGNVQI 1025
>sp|Q6TS35|TAU_SPECI Microtubule-associated protein tau OS=Spermophilus citellus GN=MAPT
PE=1 SV=3
Length = 430
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 296 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 355
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 356 GNKKIETHKLTFRENA 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 246 RSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 298
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 246 RSKIGSTENLKHQPGGGKVQIINKK 270
>sp|P36225|MAP4_BOVIN Microtubule-associated protein 4 OS=Bos taurus GN=MAP4 PE=1 SV=1
Length = 1072
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI+ +K+DI K SK GS N+KHKPGGG IE QKL+ K AQ+K+GSLDNV H P G
Sbjct: 939 QIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAG 998
Query: 69 GEKKI 73
G K
Sbjct: 999 GAVKT 1003
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 42/101 (41%)
Query: 26 QSKIGSLDNVKHKPGGG-----------------------------------------IE 44
+SK+GS +N+KH+PGGG I+
Sbjct: 882 RSKVGSTENIKHQPGGGRAKVEKKTEAAAPARKPEPNAVTKAAGPIGNAQKPPTGKVQIQ 941
Query: 45 EQKLDI-KAQSKIGSLDNVKHKPGGGEKKIFDDKDYLKQKA 84
+K+DI K SK GS N+KHKPGGG+ KI K K+KA
Sbjct: 942 NKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKA 982
>sp|Q5M7W5|MAP4_RAT Microtubule-associated protein 4 OS=Rattus norvegicus GN=Map4 PE=1
SV=1
Length = 1057
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI+ +K+DI K SK GS N+KHKPGGG IE QKL+ K AQ+K+GSLDNV H P G
Sbjct: 929 QIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAG 988
Query: 69 GEKKI 73
G K
Sbjct: 989 GTVKT 993
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 22 DIKA-QSKIGSLDNVKHKPGGG---IEEQKLDI-KAQSKIGSLDNVKHKPGGGEKKIFDD 76
D+K+ +SK+GS +N+KH+PGGG I+ +K+DI K SK GS N+KHKPGGG+ KI
Sbjct: 905 DLKSVRSKVGSTENMKHQPGGGRVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQ 964
Query: 77 KDYLKQKA 84
K K+KA
Sbjct: 965 KLNFKEKA 972
>sp|P10637|TAU_MOUSE Microtubule-associated protein tau OS=Mus musculus GN=Mapt PE=1
SV=3
Length = 733
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 599 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 658
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 659 GNKKIETHKLTFRENA 674
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 549 RSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 601
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 549 RSKIGSTENLKHQPGGGKVQIINKK 573
>sp|P15146|MAP2_RAT Microtubule-associated protein 2 OS=Rattus norvegicus GN=Map2 PE=1
SV=3
Length = 1861
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 13 NGQIEEQKLDIK-AQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKP 66
N QI +K+D+ SK GSL N++H+PGGG IE KLD K AQ+K+GSLDN H P
Sbjct: 1725 NVQIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHHVP 1784
Query: 67 GGGEKKI 73
GGG KI
Sbjct: 1785 GGGNVKI 1791
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDI-KAQSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS DN+K++P GG I +K+D K QS+ GS DN+KH GGG +I K
Sbjct: 1677 KSKIGSTDNIKYQPKGGQVRILNKKMDFSKVQSRCGSKDNIKHSAGGGNVQIVTKK 1732
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK-DYLKQKAAGDSK 89
+SKIGS DN+K++P GG+ +I + K D+ K ++ SK
Sbjct: 1677 KSKIGSTDNIKYQPKGGQVRILNKKMDFSKVQSRCGSK 1714
>sp|Q5S6V2|TAU_PONPY Microtubule-associated protein tau OS=Pongo pygmaeus GN=MAPT PE=3
SV=3
Length = 758
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 624 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 683
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 684 GHKKIETHKLTFRENA 699
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 574 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 626
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 574 KSKIGSTENLKHQPGGGKVQIINKK 598
>sp|Q5YCW1|TAU_PANTR Microtubule-associated protein tau OS=Pan troglodytes GN=MAPT PE=3
SV=4
Length = 776
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 642 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 701
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 702 GNKKIETHKLTFRENA 717
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 592 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 644
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 592 KSKIGSTENLKHQPGGGKVQIINKK 616
>sp|Q5YCW0|TAU_GORGO Microtubule-associated protein tau OS=Gorilla gorilla gorilla
GN=MAPT PE=3 SV=4
Length = 776
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 642 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 701
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 702 GNKKIETHKLTFRENA 717
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 592 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 644
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 592 KSKIGSTENLKHQPGGGKVQIINKK 616
>sp|P10636|TAU_HUMAN Microtubule-associated protein tau OS=Homo sapiens GN=MAPT PE=1
SV=5
Length = 758
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 624 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 683
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 684 GNKKIETHKLTFRENA 699
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 574 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 626
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 574 KSKIGSTENLKHQPGGGKVQIINKK 598
>sp|Q5YCV9|TAU_HYLLA Microtubule-associated protein tau OS=Hylobates lar GN=MAPT PE=3
SV=4
Length = 776
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 642 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 701
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 702 GNKKIETHKLTFRENA 717
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 592 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 644
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 592 KSKIGSTENLKHQPGGGKVQIINKK 616
>sp|P57786|TAU_MACMU Microtubule-associated protein tau OS=Macaca mulatta GN=MAPT PE=2
SV=2
Length = 459
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 325 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 384
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 385 GNKKIETHKLTFRENA 400
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 275 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 327
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 275 KSKIGSTENLKHQPGGGKVQIINKK 299
>sp|O02828|TAU_CAPHI Microtubule-associated protein tau OS=Capra hircus GN=MAPT PE=2
SV=3
Length = 403
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 269 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 328
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 329 GNKKIETHKLTFRENA 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 219 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 271
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 219 KSKIGSTENLKHQPGGGKVQIINKK 243
>sp|P19332|TAU_RAT Microtubule-associated protein tau OS=Rattus norvegicus GN=Mapt
PE=1 SV=3
Length = 752
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 24 KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGGGEKKIFDDKD 78
K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGGG KKI K
Sbjct: 628 KVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKL 687
Query: 79 YLKQKA 84
++ A
Sbjct: 688 TFRENA 693
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG I
Sbjct: 568 RSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVHIV 620
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 568 RSKIGSTENLKHQPGGGKVQIINKK 592
>sp|P29172|TAU_BOVIN Microtubule-associated protein tau OS=Bos taurus GN=MAPT PE=1 SV=3
Length = 448
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 314 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 373
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 374 GNKKIETHKLTFRENA 389
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 264 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 316
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 264 KSKIGSTENLKHQPGGGKVQIINKK 288
>sp|Q9MYX8|TAU_PAPHA Microtubule-associated protein tau OS=Papio hamadryas GN=MAPT PE=2
SV=3
Length = 383
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 15 QIEEQKLDI-KAQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI + +D+ K SK GSL N+ HKPGGG ++ +KLD K QSKIGSLDN+ H PGG
Sbjct: 249 QIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGG 308
Query: 69 GEKKIFDDKDYLKQKA 84
G KKI K ++ A
Sbjct: 309 GNKKIETHKLTFRENA 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIF 74
+SKIGS +N+KH+PGGG I +KLD+ QSK GS DN+KH PGGG +I
Sbjct: 199 KSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIV 251
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 53 QSKIGSLDNVKHKPGGGEKKIFDDK 77
+SKIGS +N+KH+PGGG+ +I + K
Sbjct: 199 KSKIGSTENLKHQPGGGKVQIINKK 223
>sp|P20357|MAP2_MOUSE Microtubule-associated protein 2 OS=Mus musculus GN=Map2 PE=1 SV=2
Length = 1828
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 6/65 (9%)
Query: 15 QIEEQKLDIK-AQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI +K+D+ SK GSL N++H+PGGG IE KLD K AQ+K+GSLDN H PGG
Sbjct: 1694 QIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHHVPGG 1753
Query: 69 GEKKI 73
G KI
Sbjct: 1754 GNVKI 1758
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIFDDKDYLK 81
+SKIGS DN+K++P GG I +K+D+ SK GSL N++H+PGGG KI K K
Sbjct: 1675 KSKIGSTDNIKYQPKGGQVQIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFK 1734
Query: 82 QKA 84
+KA
Sbjct: 1735 EKA 1737
>sp|P11137|MAP2_HUMAN Microtubule-associated protein 2 OS=Homo sapiens GN=MAP2 PE=1 SV=4
Length = 1827
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 6/65 (9%)
Query: 15 QIEEQKLDIK-AQSKIGSLDNVKHKPGGG---IEEQKLDIK--AQSKIGSLDNVKHKPGG 68
QI +K+D+ SK GSL N++H+PGGG IE KLD K AQ+K+GSLDN H PGG
Sbjct: 1693 QIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHHVPGG 1752
Query: 69 GEKKI 73
G KI
Sbjct: 1753 GNVKI 1757
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 26 QSKIGSLDNVKHKPGGG---IEEQKLDIK-AQSKIGSLDNVKHKPGGGEKKIFDDKDYLK 81
+SKIGS DN+K++P GG I +K+D+ SK GSL N++H+PGGG KI K K
Sbjct: 1674 KSKIGSTDNIKYQPKGGQVQIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFK 1733
Query: 82 QKA 84
+KA
Sbjct: 1734 EKA 1736
>sp|B2TIK1|RS13_CLOBB 30S ribosomal protein S13 OS=Clostridium botulinum (strain Eklund
17B / Type B) GN=rpsM PE=3 SV=1
Length = 122
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 VDSYVNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIG 57
+ +Y+N+N + G + L+IK +IGS ++H+ G + QK A+++ G
Sbjct: 56 IRTYINKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKG 112
>sp|B2UYD6|RS13_CLOBA 30S ribosomal protein S13 OS=Clostridium botulinum (strain Alaska
E43 / Type E3) GN=rpsM PE=3 SV=1
Length = 122
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 VDSYVNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIG 57
+ +Y+N+N + G + L+IK +IGS ++H+ G + QK A+++ G
Sbjct: 56 IRTYINKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKG 112
>sp|A6LPT7|RS13_CLOB8 30S ribosomal protein S13 OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=rpsM PE=3 SV=1
Length = 122
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ +Y+N+N + G + + L+IK +IGS ++H+ G + QK A+++ G
Sbjct: 56 IRTYINKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKK 115
Query: 61 NVKHK 65
+ +K
Sbjct: 116 TIANK 120
>sp|B9KEH3|RS13_CAMLR 30S ribosomal protein S13 OS=Campylobacter lari (strain RM2100 /
D67 / ATCC BAA-1060) GN=rpsM PE=3 SV=1
Length = 121
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTV 117
>sp|Q5HSJ9|RS13_CAMJR 30S ribosomal protein S13 OS=Campylobacter jejuni (strain RM1221)
GN=rpsM PE=3 SV=1
Length = 121
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTV 117
>sp|Q9PM83|RS13_CAMJE 30S ribosomal protein S13 OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=rpsM PE=3 SV=1
Length = 121
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTV 117
>sp|A7H5U2|RS13_CAMJD 30S ribosomal protein S13 OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=rpsM PE=3
SV=1
Length = 121
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTV 117
>sp|A8FNQ4|RS13_CAMJ8 30S ribosomal protein S13 OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=rpsM PE=3
SV=1
Length = 121
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTV 117
>sp|A1W1J4|RS13_CAMJJ 30S ribosomal protein S13 OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=rpsM PE=3 SV=1
Length = 121
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTV 117
>sp|Q890Q7|RS13_CLOTE 30S ribosomal protein S13 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rpsM PE=3 SV=1
Length = 123
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 1 MVDSYVNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIG 57
++ Y+N+N G + LDIK +IGS ++H+ G + QK A+++ G
Sbjct: 55 LLRDYINQNLKVEGDLRRDVALDIKRLKEIGSYRGIRHRRGLPVRGQKTKTNARTRKG 112
>sp|A6Q1K1|RS13_NITSB 30S ribosomal protein S13 OS=Nitratiruptor sp. (strain SB155-2)
GN=rpsM PE=3 SV=1
Length = 120
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 VDSYVNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIG 57
++ ++ EN + G + + +DIKA IG ++H+ G + Q+ A+++ G
Sbjct: 56 INKHIRENYMVEGDLRRKVAMDIKALMDIGCYRGLRHRRGLPVRGQRTKTNARTRKG 112
>sp|A7GJ48|RS13_CLOBL 30S ribosomal protein S13 OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|B1IGC8|RS13_CLOBK 30S ribosomal protein S13 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|C1FMS5|RS13_CLOBJ 30S ribosomal protein S13 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|A5I7I0|RS13_CLOBH 30S ribosomal protein S13 OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|C3KVM5|RS13_CLOB6 30S ribosomal protein S13 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|A7FZ47|RS13_CLOB1 30S ribosomal protein S13 OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|B1KSJ9|RS13_CLOBM 30S ribosomal protein S13 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rpsM PE=3 SV=1
Length = 123
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 VDSYVNENQLFNGQIE-EQKLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLD 60
+ YVN+N G + E KL+IK +IGS ++H+ + QK A+++ G
Sbjct: 56 IRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGP-- 113
Query: 61 NVKHKPGGGEKK 72
K GG +KK
Sbjct: 114 --KRAIGGKKKK 123
>sp|A7H0Z2|RS13_CAMC5 30S ribosomal protein S13 OS=Campylobacter curvus (strain 525.92)
GN=rpsM PE=3 SV=1
Length = 122
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ E+ + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQEHHIVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTV 117
>sp|A7ZFZ0|RS13_CAMC1 30S ribosomal protein S13 OS=Campylobacter concisus (strain 13826)
GN=rpsM PE=3 SV=1
Length = 122
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ E+ + G + +Q +DIKA +GS ++H+ G + QK A+++ G V
Sbjct: 60 IQEHHVVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTV 117
>sp|Q82GD0|SYC_STRAW Cysteine--tRNA ligase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=cysS PE=3 SV=1
Length = 466
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 59 LDNVKHKPGGGEKKIFDDKDYLKQKAAGDSKPTSEVP 95
LDN+ G GE D +D+ KAA +PT E P
Sbjct: 160 LDNLLQPSGEGETGKRDPRDFAMWKAAKPGEPTWETP 196
>sp|A6QCS1|RS13_SULNB 30S ribosomal protein S13 OS=Sulfurovum sp. (strain NBC37-1)
GN=rpsM PE=3 SV=1
Length = 120
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 6 VNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIGSLDNV 62
+ EN + G + ++ LDIKA +GS ++H+ G QK A+++ G V
Sbjct: 60 IQENVMVEGDLRKKVTLDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTV 117
>sp|A0PXX2|RS13_CLONN 30S ribosomal protein S13 OS=Clostridium novyi (strain NT) GN=rpsM
PE=3 SV=1
Length = 123
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 VDSYVNENQLFNGQIEEQ-KLDIKAQSKIGSLDNVKHKPGGGIEEQKLDIKAQSKIG 57
+ Y+ +N + G + LDIK +IG ++H+ G + QK A+++ G
Sbjct: 56 IRDYIGKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKG 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.130 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,419,444
Number of Sequences: 539616
Number of extensions: 1749543
Number of successful extensions: 2687
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 2509
Number of HSP's gapped (non-prelim): 128
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)