BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10941
(110 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 30/132 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK--------------- 46
K AF ++D G+G+I G V+ AL NPT A + K+ G K
Sbjct: 12 KEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLP 71
Query: 47 ------------VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
+ED++E L+++DK+ +GT++GAE+ H+L++LGE+M E EV +++
Sbjct: 72 MMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA-- 129
Query: 95 LDAEDEDGFVQY 106
ED +G + Y
Sbjct: 130 -GHEDSNGCINY 140
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVL 91
+F E +L+D+ DG +L ++ ++ +LG+ +EV +VL
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVL 51
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 30/132 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK--------------- 46
K AF ++D G+G+I G V+ AL NPT A + K+ G K
Sbjct: 10 KEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLP 69
Query: 47 ------------VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
+ED++E L+++DK+ +GT++GAE+ H+L++LGE+M E EV +++
Sbjct: 70 MMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA-- 127
Query: 95 LDAEDEDGFVQY 106
ED +G + Y
Sbjct: 128 -GHEDSNGCINY 138
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVL 91
+F E +L+D+ DG +L ++ ++ +LG+ +EV +VL
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVL 49
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 30/132 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK--------------- 46
K AF+++D G+G+I G V+ AL NPT A + K+ G K
Sbjct: 13 KEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLP 72
Query: 47 ------------VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
YED+LE +++DK+ +G ++GAEL H+L +LGE+M E EV VL
Sbjct: 73 MLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-- 130
Query: 95 LDAEDEDGFVQY 106
ED +G + Y
Sbjct: 131 -GHEDSNGCINY 141
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVL 91
E+F E +L+D+ DG +L ++ ++ +LG+ +EV +VL
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVL 52
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 30/132 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK--------------- 46
K AF ++D G+ +I A +G + AL NPT A I K+ G K
Sbjct: 9 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 68
Query: 47 ------------VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
+EDF+E L+++DK+ +GT++GAEL H+L +LGE+M E EV E+++
Sbjct: 69 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-- 126
Query: 95 LDAEDEDGFVQY 106
ED +G + Y
Sbjct: 127 -GQEDSNGCINY 137
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 45 KKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVL 91
K +DF E L+D+ D + +++ I +LG+ +E+N++L
Sbjct: 2 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 48
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 30/132 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK--------------- 46
K AF ++D G+ +I A +G + AL NPT A I K+ G K
Sbjct: 11 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 70
Query: 47 ------------VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
+EDF+E L+++DK+ +GT++GAEL H+L +LGE+M E EV E+++
Sbjct: 71 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-- 128
Query: 95 LDAEDEDGFVQY 106
ED +G + Y
Sbjct: 129 -GQEDSNGCINY 139
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 45 KKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVL 91
K +DF E L+D+ D + +++ I +LG+ +E+N++L
Sbjct: 4 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 50
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 30/132 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK--------------- 46
K AF ++D G+ +I +G ++ AL NPT A I K+ G K
Sbjct: 7 KEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFLP 66
Query: 47 ------------VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
+EDF+E L+++DK+ +GT++GAEL H+L +LGE+M E EV E+++
Sbjct: 67 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-- 124
Query: 95 LDAEDEDGFVQY 106
ED +G + Y
Sbjct: 125 -GQEDSNGCINY 135
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVL 91
DF E L+D+ D + +++ I+ +LG+ +E+N++L
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKIL 46
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 25/126 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKK------------KVYED-- 50
FD +D +G +DA +G +L L +NPT A + + GGTKK +YE+
Sbjct: 18 FDFWDGR-DGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMS 76
Query: 51 ----------FLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
F+E K +D++ G + AE+ ++L LGER+ E + N++ C ED
Sbjct: 77 SKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDI 136
Query: 101 DGFVQY 106
DG ++Y
Sbjct: 137 DGNIKY 142
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 23/129 (17%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D + NG I + +L V+ +L L+P+ A + L G + + +FL
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E K++DK DG + AEL H+L S+GE++ ++EV+++L++ D
Sbjct: 74 SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGS 133
Query: 99 DEDGFVQYA 107
E Q+A
Sbjct: 134 GEINIQQFA 142
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK +G++ +EL ++ SLG E+EVN+++ + D DG
Sbjct: 6 TEEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI----DVDG 60
Query: 103 FVQYAHSE 110
Q SE
Sbjct: 61 NHQIEFSE 68
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 23/129 (17%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D + NG I + +L V+ +L L+P+ A + L G + + +FL
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E K++DK DG + AEL H+L S+GE++ ++EV+++L++ D
Sbjct: 73 SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGS 132
Query: 99 DEDGFVQYA 107
E Q+A
Sbjct: 133 GEINIQQFA 141
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK +G++ +EL ++ SLG E+EVN+++ + D DG
Sbjct: 5 TEEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI----DVDG 59
Query: 103 FVQYAHSE 110
Q SE
Sbjct: 60 NHQIEFSE 67
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 23/129 (17%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDF---- 51
K AF ++D + +G I A +L V+ +L L+P+ A + L G + +F
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALM 73
Query: 52 -------------LECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
LE K++DK DG + AEL H+L S+GE++ ++EV+E+L++ D
Sbjct: 74 SRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGS 133
Query: 99 DEDGFVQYA 107
E Q+A
Sbjct: 134 GEINIKQFA 142
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQD 93
T++++ E F E L+DK G++ +EL ++ SLG E+EV +++ +
Sbjct: 6 TEEQIAE-FKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNE 55
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA LG V L +NP + +GGT K
Sbjct: 15 FDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 73
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
+ D++E K +D++ G + GAEL H+L +LGER+ + +V+E+++ ED +
Sbjct: 74 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLE 133
Query: 102 GFVQY 106
G V+Y
Sbjct: 134 GNVKY 138
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA +G V L +NP + +GGT K
Sbjct: 18 FDFWDGR-DGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 76
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
Y D++E K +D++ G + GAEL H+L LGER+ + EV+E++ ED +
Sbjct: 77 DCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLE 136
Query: 102 GFVQY 106
G V+Y
Sbjct: 137 GNVKY 141
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA +G V L +NP + +GGT K
Sbjct: 19 FDFWDGR-DGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 77
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
Y D++E K +D++ G + GAEL H+L LGER+ + EV+E++ ED +
Sbjct: 78 DCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLE 137
Query: 102 GFVQY 106
G V+Y
Sbjct: 138 GNVKY 142
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA LG V L +NP + +GGT K
Sbjct: 15 FDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 73
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
+ D++E K +D++ G + GAEL H+L +LGER+ + +V+E+++ ED +
Sbjct: 74 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLE 133
Query: 102 GFVQY 106
G V+Y
Sbjct: 134 GNVKY 138
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA LG V L +NP + +GGT K
Sbjct: 16 FDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 74
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
+ D++E K +D++ G + GAEL H+L +LGER+ + +V+E+++ ED +
Sbjct: 75 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLE 134
Query: 102 GFVQY 106
G V+Y
Sbjct: 135 GNVKY 139
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA LG V L +NP + +GGT K
Sbjct: 18 FDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 76
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
+ D++E K +D++ G + GAEL H+L +LGER+ + +V+E+++ ED +
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLE 136
Query: 102 GFVQY 106
G V+Y
Sbjct: 137 GNVKY 141
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA LG V L +NP + +GGT K
Sbjct: 18 FDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 76
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
+ D++E K +D++ G + GAEL H+L +LGER+ + +V+E+++ ED +
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLE 136
Query: 102 GFVQY 106
G V+Y
Sbjct: 137 GNVKY 141
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK------------------ 46
FD +D +G +DA LG V L +NP + +GGT K
Sbjct: 18 FDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLM 76
Query: 47 -----VYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDED 101
+ D++E K +D++ G + GAEL H+L LGER+ + EV+E++ ED +
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLE 136
Query: 102 GFVQY 106
G V+Y
Sbjct: 137 GNVKY 141
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 23/117 (19%)
Query: 13 NGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKK-----------------------VYE 49
+G +DA LG V L +NP + +GGT K +
Sbjct: 25 DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFA 84
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
D++E K +D++ G + GAEL H+L +LGER+ + +V+E+++ ED +G V+Y
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 23/126 (18%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 ---KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
K E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D
Sbjct: 73 ARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDG 130
Query: 101 DGFVQY 106
DG V Y
Sbjct: 131 DGQVNY 136
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 24/127 (18%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 44 ----KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAED 99
K E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D
Sbjct: 69 ARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--NID 126
Query: 100 EDGFVQY 106
DG V Y
Sbjct: 127 GDGQVNY 133
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 1 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 55
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 44 -----KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
++ E+ +E K++D+ +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG + Y
Sbjct: 131 DGDGHINY 138
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 44 -----KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
++ E+ +E K++D+ +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG + Y
Sbjct: 131 DGDGHINY 138
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 44 -KKKVY----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K Y E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 374 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 431
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 432 DGDGQVNY 439
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 360
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATI------------------EKLGGT 43
K AF ++D +G+G I +LG V+ +L NPT A + E LG
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ LGE++ + EV+E+++ A
Sbjct: 73 ARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIR----AA 128
Query: 99 DEDGFVQYAHSE 110
D DG Q + E
Sbjct: 129 DTDGDGQVNYEE 140
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T+++V E F E L+DK DG + EL ++ SLG+ E+E L+D + D DG
Sbjct: 5 TEEQVTE-FKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAE----LRDMMSEIDRDG 59
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 373
Query: 44 -KKKVY----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K Y E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 374 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 431
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 432 DGDGQVNY 439
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 360
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 44 -KKKVY----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K Y E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 373 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 430
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 431 DGDGQVNY 438
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 359
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 44 -KKKVY----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K Y E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 373 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 430
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 431 DGDGQVNY 438
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 359
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DV 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--NI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DV 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 76
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 77 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 134
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 135 DGDGQVNY 142
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 9 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 63
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 69
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 70 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DV 127
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 128 DGDGQVNY 135
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 56
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 128
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 129 DGDGQVNY 136
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 41 GGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D
Sbjct: 1 AATEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDA 55
Query: 101 DG 102
DG
Sbjct: 56 DG 57
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRES--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 128
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 129 DGDGQVNY 136
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 3 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 57
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMM 364
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 365 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 422
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 423 DGDGQVNY 430
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 351
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 74
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 75 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 132
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 133 DGDGQVNY 140
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 7 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 61
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 69 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 126
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 127 DGDGQVNY 134
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 1 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 55
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK ++G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DV 131
Query: 99 DEDGFVQY 106
D DG + Y
Sbjct: 132 DGDGQINY 139
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DG + EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK ++G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DV 131
Query: 99 DEDGFVQY 106
D DG + Y
Sbjct: 132 DGDGQINY 139
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DG + EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 78
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 79 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 136
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 137 DGDGQVNY 144
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 11 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 65
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 128
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 129 DGDGQVNY 136
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 3 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 57
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 71
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 72 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 129
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 130 DGDGQVNY 137
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 4 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 58
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 69
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 70 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 127
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 128 DGDGQVNY 135
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 2 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 56
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 375 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 432
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 433 DGDGQVNY 440
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 361
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 374 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 431
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 432 DGDGQVNY 439
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 360
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 374 ARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 431
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 432 DGDGQVNY 439
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 360
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 374 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 431
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 432 DGDGQVNY 439
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 360
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 337 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 394
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 395 DGDGQVNY 402
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 323
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 397
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 398 DGDGQVNY 405
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 326
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 397
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 398 DGDGQVNY 405
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 326
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE++ + EV++++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V+ +L NPT A ++ + G + +FL
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H++ +LGE++ + EV+E++++
Sbjct: 373 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 430
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 431 DGDGQVNY 438
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 359
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE + + EV+E++++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +LG V+ +L NPT A ++ + GT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++DK +G + AEL H++ +LGE + + EV+E++++
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 23/109 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL--- 52
K AF ++D + NG I + +L V+ +L L+P+ A + L G + + +FL
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEV 87
E K++DK DG + AEL H+L S+GE++ ++E+
Sbjct: 73 SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK +G++ +EL ++ SLG E+EVN+++ + D DG
Sbjct: 5 TEEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI----DVDG 59
Query: 103 FVQYAHSE 110
Q SE
Sbjct: 60 NHQIEFSE 67
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIE 38
AF ++D G+G I A +L VL ++ T A +E
Sbjct: 88 AFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVY------------- 48
K AF ++D G G+I +G +L A NPTLA I ++ T
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPN 67
Query: 49 --------EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
E+F++ +++DK G + EL ++L SLGE++ E++E+L+ +
Sbjct: 68 GFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV---PVK 124
Query: 101 DGFVQY 106
DG V Y
Sbjct: 125 DGMVNY 130
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 27/129 (20%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I +L V+ +L+ NPT ++ + GT
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC-LDA 97
KKV E+ E K++DK ++G + +EL H++I+LGE++ + EV +++++ LD
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG 132
Query: 98 EDEDGFVQY 106
DG V Y
Sbjct: 133 ---DGQVNY 138
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
DF E L+DK DG + EL ++ SL + E E LQD + D DG
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEE----LQDMISEVDADG 59
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------------------GGT 43
K AF +D EG G+I +LG ++ L NPT A ++ L G
Sbjct: 13 KDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIM 72
Query: 44 KKKVYE-----DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
K++ E + E K++D+ DG + AEL ++I+LGE++ + E++E++++
Sbjct: 73 AKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA--DF 130
Query: 99 DEDGFVQY 106
D DG + Y
Sbjct: 131 DGDGMINY 138
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 23/123 (18%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGG----------TKKKVY------ 48
F I+D + +G++ +LG L +L NPT A + + G T K VY
Sbjct: 11 FQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPIKT 70
Query: 49 -----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGF 103
++ L+ + DK+ +GT+ AEL +L++LG+ + SEV E++++ + DG
Sbjct: 71 PTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV--SVSGDGA 128
Query: 104 VQY 106
+ Y
Sbjct: 129 INY 131
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 53 ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEV 90
EC +++DK DG + EL L SLG+ +E+N +
Sbjct: 9 ECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI 46
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT---------- 43
K AF ++D +G+G I LG V+ +L NPT A ++ + GT
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMM 373
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K+ E+ E +++ K +G + A+L H++ +LGE++ + EV+E++++
Sbjct: 374 ARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREA--GI 431
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 432 DGDGQVNY 439
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DG + +L ++ SLG+ E+E LQD ++ DG
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAE----LQDMINEVGADG 360
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIE------KLGGTKKKVYEDFL--- 52
K AF ++D +G+G I +LG V +L NPT A ++ G + +FL
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXX 72
Query: 53 --------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
E +++DK +G + AEL H+ +LGE++ + EV+E +++
Sbjct: 73 ARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL + SLG E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAE----LQDXINEVDADG 59
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 26/119 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L NPT A IE++ GT
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ +C +++DK DG + EL IL + GE + E ++ ++++D
Sbjct: 83 VRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATI------------------EKLGGT 43
K AF ++D +G+G I +LG V +L NPT A + E L
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXX 72
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K E+ E +++DK +G + AEL H+ +LGE++ + EV+E +++
Sbjct: 73 ARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA--DI 130
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 131 DGDGQVNY 138
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL + SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAE----LQDXINEVDADG 59
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 26/119 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L NPT A IE++ GT
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ C +++DK DG + EL IL + GE + E ++ ++++D
Sbjct: 83 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 26/119 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L NPT A IE++ GT
Sbjct: 20 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ C +++DK DG + EL IL + GE + E ++ ++++D
Sbjct: 80 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 138
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 26/119 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L NPT A IE++ GT
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ +C +++DK DG + EL IL + GE + E ++ ++++D
Sbjct: 83 VRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 27/122 (22%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT------------ 43
AFD++DT+G+G IDA +L + AL P I+K+ GT
Sbjct: 13 AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTA 72
Query: 44 ---KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
++ E+ ++ +L+D E G + L + LGE M +E LQ+ +D D
Sbjct: 73 KMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENM----TDEELQEMIDEADR 128
Query: 101 DG 102
DG
Sbjct: 129 DG 130
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATI------------------EKLGGT 43
K AF ++D +G+G I +LG V +L NPT A + E L
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXX 73
Query: 44 KKKVY-----EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAE 98
+K E+ E +++DK +G + AEL H+ +LGE++ + EV++ +++
Sbjct: 74 ARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREA--DI 131
Query: 99 DEDGFVQY 106
D DG V Y
Sbjct: 132 DGDGQVNY 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL + SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAE----LQDXINEVDADG 60
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT------------ 43
AFD++DT+G+G IDA +L + AL P I+K+ GT
Sbjct: 33 AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 92
Query: 44 ---KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC---LDA 97
++ E+ L+ +L+D GT+ +L + LGE + E E+ E++ + D
Sbjct: 93 KMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 152
Query: 98 E-DEDGFVQ 105
E DED F++
Sbjct: 153 EIDEDEFIR 161
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 26/119 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L NPT A IE++ GT
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ C +++DK DG + EL IL + GE + E ++ ++++D
Sbjct: 83 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDS 141
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L PT A IE++ GT
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQD 93
K K E+ EC +++D+ DG + EL I + GE + + E+ +++D
Sbjct: 80 VRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIE-------------------------- 38
F ++D +G G I LG L A+ NPT ++
Sbjct: 10 FTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEV 69
Query: 39 ---KLGGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQ 92
+L T K EDF++ +++DK+ G + +L ++L LGE++ ++EV+E+L+
Sbjct: 70 NEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 27/122 (22%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFL----- 52
AFD++D +G G ID +L + AL P I+K+ GT K + DFL
Sbjct: 11 AFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 70
Query: 53 ------------ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
+ KL+D E G + L + LGE + +E LQ+ +D D
Sbjct: 71 KMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL----TDEELQEMIDEADR 126
Query: 101 DG 102
DG
Sbjct: 127 DG 128
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTL----ATIEKL----GGT---------- 43
K AFD++D +G G I +LG V+ L PT A IE++ GT
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 44 --------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQD 93
K K E+ E +++D+ DG + EL I + GE + + E+ +++D
Sbjct: 80 VRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC-LDAEDEDGFVQY 106
E+ E K++DK ++G + +EL H++I+LGE++ + EV +++++ LD DG V Y
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG---DGQVNY 64
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEK------LGGTKKKVYEDFLECL 55
K AF ++D + NG I A +L V+ L T +E+ L G + YE+F++ +
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ +E K++D+ +G + AEL H++ +LGE++ + EV+E++++ D DG + Y
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA--DIDGDGHINY 63
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYAL 28
AF ++D +GNG I A +L V+ L
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNL 37
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC-LDAEDEDGFVQY 106
E+ E K++DK ++G + +EL H++I+LGE++ + EV +++++ LD DG V Y
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG---DGQVNY 59
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEK------LGGTKKKVYEDFLECL 55
K AF ++D + NG I A +L V+ L T +E+ L G + YE+F++ +
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK ++G + AEL H++ +LGE++ + EV+E++++ D DG + Y
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINY 59
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 64
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A +L V+ L T ++++ G + YE+F++ +
Sbjct: 14 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 61
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A +L V+ L T ++++ G + YE+F++ +
Sbjct: 11 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 63
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A +L V+ L T ++++ G + YE+F++ +
Sbjct: 13 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 70
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 60
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A +L V+ L T ++++ G + YE+F++ +
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 57
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A +L V+ L T ++++ G + YE+F++ +
Sbjct: 7 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 64
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 60
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A +L V+ L T ++++ G + YE+F++ +
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E +++DK +G + A+L H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 62
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AF ++D +GNG I A DL V+ L T ++++ G + YEDF++ +
Sbjct: 12 AFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMM 69
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 32/44 (72%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQ 92
EDF++ +++DK+ G + +L ++L LGE++ ++EV+E+L+
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 48
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 27/122 (22%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPT-----------------------LATIEKL 40
AFD++D +G G ID +L AL P T+
Sbjct: 36 AFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTVXTQ 95
Query: 41 GGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDE 100
++K E+ L+ KL+D E G + L + LGE + +E LQ+ +D D
Sbjct: 96 KXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL----TDEELQEXIDEADR 151
Query: 101 DG 102
DG
Sbjct: 152 DG 153
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
AFD++DT+G+G IDA +L + AL P I+K+
Sbjct: 35 AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 71
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF +YD +G+G I +LG V+ +L LNPT A ++ +
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDM 51
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E LYDK DGT+ EL ++ SLG E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAE----LQDMINEVDADG 59
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
E+ E ++ DK +G + AEL H++ +LGE++ + EV+E++++ D DG V Y
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 84
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 6 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 60
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 52
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK DGT+ EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 5 TEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL------GGTKKKVYEDFLECL 55
AFD++D +G G ID +L + AL P I+K+ GT K + DFL +
Sbjct: 36 AFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVM 93
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
K AFD++D +G G I +LG V+ L NPT
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPT 54
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
K AFD++D +G G I +LG V+ L NPT
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPT 54
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
T++++ E F E L+DK +G++ +EL ++ SLG E+EVN+++ + D DG
Sbjct: 5 TEEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI----DVDG 59
Query: 103 FVQYAHSE 110
Q SE
Sbjct: 60 NHQIEFSE 67
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D + NG I + +L V+ +L L+P+ A + L
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDL 51
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
K AFD++D +G G I +LG V+ L NPT
Sbjct: 12 KAAFDMFDADGGGDISTKELGTVMRMLGQNPT 43
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
Length = 191
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDG 64
F DT+G+G I +L L + + +LAT EKL L +YDK G
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKL--------------LHMYDKNHSG 78
Query: 65 TMLGAE---LHHILISLGE 80
+ E LHH ++S+ E
Sbjct: 79 EITFDEFKDLHHFILSMRE 97
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
K AFD++D +G G I LG V+ L NPT
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPT 54
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 29/132 (21%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL--------GGT--------- 43
K AFDI+ +G I +LG+V+ L NPT ++++ GT
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 44 ---------KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ + ++ DK DG + EL +L + GE + E ++ E+++D
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 95 LDAEDEDGFVQY 106
++ DG + Y
Sbjct: 141 --DKNNDGRIDY 150
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+F E L+DK DG + EL ++ SLG+ E+E LQD ++ D DG
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE----LQDMINEVDADG 59
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AF ++D +G+G I +LG V+ +L NPT A ++ +
Sbjct: 13 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDM 51
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQ 61
K AF ++D + + ++ A +LG V+ AL NPT I E +K YDK
Sbjct: 17 KEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKIS--------------EIVKDYDKD 62
Query: 62 EDGTMLGAELHHILISLGERME 83
G I++ G+ ++
Sbjct: 63 NSGKFDQETFLTIMLEYGQEVD 84
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQD 93
+++ E +L+DK D + EL ++ +LG + +++E+++D
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKD 58
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQED 63
DI+DT+GNG++D + + ++ G ++K+ F ++YD +D
Sbjct: 58 VIDIFDTDGNGEVDFKEFIEGVSQFSVK---------GDKEQKLRFAF----RIYDMDKD 104
Query: 64 GTMLGAELHHIL-ISLGERMEESEVNEVLQDCLDAEDEDG 102
G + EL +L + +G ++++++ +++ + D+DG
Sbjct: 105 GYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 144
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQED 63
DI+DT+GNG++D + + ++ G ++K+ F ++YD +D
Sbjct: 57 VIDIFDTDGNGEVDFKEFIEGVSQFSVK---------GDKEQKLRFAF----RIYDMDKD 103
Query: 64 GTMLGAELHHIL-ISLGERMEESEVNEVLQDCLDAEDEDG 102
G + EL +L + +G ++++++ +++ + D+DG
Sbjct: 104 GYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 143
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQED 63
DI+DT+GNG++D + + ++ G ++K+ F ++YD +D
Sbjct: 43 VIDIFDTDGNGEVDFKEFIEGVSQFSVK---------GDKEQKLRFAF----RIYDMDKD 89
Query: 64 GTMLGAELHHIL-ISLGERMEESEVNEVLQDCLDAEDEDG 102
G + EL +L + +G ++++++ +++ + D+DG
Sbjct: 90 GYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 129
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQED 63
DI+DT+GNG++D + + ++ G ++K+ F ++YD +D
Sbjct: 44 VIDIFDTDGNGEVDFKEFIEGVSQFSVK---------GDKEQKLRFAF----RIYDMDKD 90
Query: 64 GTMLGAELHHIL-ISLGERMEESEVNEVLQDCLDAEDEDG 102
G + EL +L + +G ++++++ +++ + D+DG
Sbjct: 91 GYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 130
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT-------------------LATI--EKL 40
K AF++ D +G ID DL +L ++ NPT T+ EKL
Sbjct: 10 KEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKL 69
Query: 41 GGT-KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
GT + V + C +D++ G + L +L ++G+R + EV+E+ ++
Sbjct: 70 NGTDPEDVIRNAFAC---FDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREA 121
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
K K E+ C +++DK DG + EL IL + GE + E ++ ++++D
Sbjct: 4 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDS 55
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDG 64
D D++G+G ID + A I++ +KK +Y F +++D DG
Sbjct: 96 LDQIDSDGSGNIDYTEF-----------LAAAIDRRQLSKKLIYCAF----RVFDVDNDG 140
Query: 65 TMLGAELHHILISLGER--MEESEVNEV 90
+ AEL H+L + +R + E +VN+V
Sbjct: 141 EITTAELAHVLFNGNKRGNITERDVNQV 168
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 41 GGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC---LDA 97
G ++ E+ L+ +L+D GT+ +L + LGE + E E+ E++ + D
Sbjct: 1 GSGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 98 E-DEDGFVQ 105
E DED F++
Sbjct: 61 EIDEDEFIR 69
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 13/71 (18%)
Query: 9 DTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDGTMLG 68
D +GNG ID P T+ E+ E +++DK +G +
Sbjct: 11 DADGNGTIDF-------------PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISA 57
Query: 69 AELHHILISLG 79
AEL H++ +LG
Sbjct: 58 AELRHVMTNLG 68
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYAL 28
AF ++D +GNG I A +L V+ L
Sbjct: 43 AFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
++K E+ L+ KL+D E G + L + LGE + +E LQ+ +D D DG
Sbjct: 15 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL----TDEELQEMIDEADRDG 70
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
++K E+ L+ KL+D E G + L + LGE + +E LQ+ +D D DG
Sbjct: 5 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL----TDEELQEMIDEADRDG 60
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+K K E+ + +++DK DG + EL +L + GE + E ++ E+++D ++ DG
Sbjct: 4 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG--DKNNDG 61
Query: 103 FVQY 106
+ Y
Sbjct: 62 RIDY 65
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 43 TKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
+K K E+ + +++DK DG + EL +L + GE + E ++ E+++D ++ DG
Sbjct: 9 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG--DKNNDG 66
Query: 103 FVQY 106
+ Y
Sbjct: 67 RIDY 70
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
K AF ++D +G+G I +L V+ +L+ NPT
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPT 44
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
DF E L+DK DG + EL ++ SL + E E LQD + D DG
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEE----LQDMISEVDADG 59
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
K AF ++D +G+G I +L V+ +L+ NPT
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPT 44
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDG 102
DF E L+DK DG + EL ++ SL + E E LQD + D DG
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEE----LQDMISEVDADG 59
>pdb|2J85|A Chain A, B116 Of Sulfolobus Turreted Icosahedral Virus (Stiv)
pdb|2J85|B Chain B, B116 Of Sulfolobus Turreted Icosahedral Virus (Stiv)
Length = 122
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 32 PTLATIEKLGGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISL 78
PT TI+KL EDF CLKL + EDGT++ A H I+L
Sbjct: 19 PTTITIDKLD------EEDF--CLKLELRLEDGTLINAIGHDSTINL 57
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 1 AKFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDK 60
A F F+ +D +GNG I D L L L GT V+E LYD
Sbjct: 131 AHFLFNAFDADGNGAIHFEDFVVGLSIL-----------LRGT---VHEKLKWAFNLYDI 176
Query: 61 QEDGTMLGAELHHILISLGERM 82
+DG + E+ I+ S+ + M
Sbjct: 177 NKDGCITKEEMLAIMKSIYDMM 198
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 2 KFAFDIYDTEGNGQIDA---VDLGRVLYALNLNPTLATIE 38
K+ F +YD +GNG ID +D+ + ALN TL+ E
Sbjct: 96 KWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEE 135
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 28.5 bits (62), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 44 KKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGF 103
K K E+ + +++DK DG + EL +L + GE + E ++ E+++D ++ DG
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG--DKNNDGR 59
Query: 104 VQY 106
+ Y
Sbjct: 60 IDY 62
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDG 64
FD++D + NG I+ + R L + P+ EK+ KLYD ++ G
Sbjct: 80 FDVFDVKRNGVIEFGEFVRSLGVFH--PSAPVHEKVKF-----------AFKLYDLRQTG 126
Query: 65 TMLGAELHHILISLGERMEESEVNEVL-QDCLDAEDEDGFVQ 105
+ EL ++++L + ESE+ VL +D ++ + FVQ
Sbjct: 127 FIEREELKEMVVAL---LHESEL--VLSEDMIEVMVDKAFVQ 163
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDG 64
FD++D + NG I+ + R L + P+ EK+ KLYD ++ G
Sbjct: 80 FDVFDVKRNGVIEFGEFVRSLGVFH--PSAPVHEKVKF-----------AFKLYDLRQTG 126
Query: 65 TMLGAELHHILISLGERMEESEVNEVL-QDCLDAEDEDGFVQ 105
+ EL ++++L + ESE+ VL +D ++ + FVQ
Sbjct: 127 FIEREELKEMVVAL---LHESEL--VLSEDMIEVMVDKAFVQ 163
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 50 DFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
+F E +L+D + G + L +L G R+E + NE+ +
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEA 51
>pdb|1JJO|C Chain C, Crystal Structure Of Mouse Neuroserpin (Cleaved Form)
pdb|1JJO|D Chain D, Crystal Structure Of Mouse Neuroserpin (Cleaved Form)
Length = 261
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 15/68 (22%)
Query: 47 VYEDFLECLKLYDKQEDGTMLGAELHHILISLG-------ERMEESEVNEVLQDCLDAED 99
V E+FL+ LK+Y AE++H+ S + E+ N +L+D + ED
Sbjct: 20 VNEEFLQMLKMY--------FNAEVNHVDFSQNVAVANSINKWVENYTNSLLKDLVSPED 71
Query: 100 EDGFVQYA 107
DG A
Sbjct: 72 FDGVTNLA 79
>pdb|2FIC|A Chain A, The Crystal Structure Of The Bar Domain From Human
Bin1AMPHIPHYSIN II And Its Implications For Molecular
Recognition
pdb|2FIC|B Chain B, The Crystal Structure Of The Bar Domain From Human
Bin1AMPHIPHYSIN II And Its Implications For Molecular
Recognition
Length = 251
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 37 IEKLGGTKKKVYEDFLECLKLYDKQ-EDGTMLGAELHHILISLGERMEES-EVNEVLQDC 94
++KLG + E F +C++ ++KQ +GT L +L L S+ E S ++NE LQ+
Sbjct: 40 LQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEV 99
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDG 64
D D++G+G+ID + A +++ +KK +Y F +++D DG
Sbjct: 93 LDQIDSDGSGKIDYTEF-----------IAAALDRKQLSKKLIYCAF----RVFDVDNDG 137
Query: 65 TMLGAELHHILISLGER--MEESEVNEVLQDCLDAE-DEDGFVQY 106
+ AEL HIL + ++ + + +VN V + D + + DG + +
Sbjct: 138 EITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDF 182
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 46 KVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQ 105
K E+ + +++DK DG + EL +L + GE + E ++ E+++D ++ DG +
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG--DKNNDGRID 59
Query: 106 Y 106
Y
Sbjct: 60 Y 60
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 46 KVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQ 105
K E+ + +++DK DG + EL +L + GE + E ++ E+++D ++ DG +
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG--DKNNDGRID 60
Query: 106 Y 106
Y
Sbjct: 61 Y 61
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AFDI+ + +G I +LG+V+ L NPT ++++
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEM 60
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AFDI+ + +G I +LG+V+ L NPT ++++
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEM 60
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYAL 28
K+AF +YD +GNG I ++ ++ A+
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAI 128
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 2 KFAFDIYDTEG--NGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AFDI+ +G +G I +LG+V+ L NPT ++++
Sbjct: 21 KAAFDIF-VQGAEDGCISTKELGKVMRMLGQNPTPEELQEM 60
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIE 38
AF ++D +GNG I +LG + +L P +E
Sbjct: 41 AFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELE 75
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AFDI+ +G I +LG+V+ L NPT ++++
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEM 60
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDAEDEDGFVQY 106
ED + +D+ DG + EL + LG+ + + E++ ++++ D+DG V Y
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREA--DVDQDGRVNY 61
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AFDI+ +G I +LG+V+ L NPT ++++
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEM 60
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 2 KFAFDIYDTEG-NGQIDAVDLGRVLYALNLNPTLATIEKL 40
K AFDI+ +G I +LG+V+ L NPT ++++
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEM 60
>pdb|3MTJ|A Chain A, The Crystal Structure Of A Homoserine Dehydrogenase From
Thiobacillus Denitrificans To 2.15a
Length = 444
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 11 EGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECL 55
EG Q+D + L V N+N +A IE L KV LE L
Sbjct: 397 EGEEQVDIILLTHVTLEKNVNAAIAKIEALDAVAGKVXRIRLEDL 441
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 29/123 (23%)
Query: 4 AFDIYDT-EGNGQIDAVDLGRVLYALNLNPTLATIE-------------------KLGGT 43
AF ++T EG+G++ +G +L L + T +TI K+ G
Sbjct: 18 AFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGA 77
Query: 44 K--------KKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCL 95
+ +++ ++ E +LYDK+ +G + + IL L E + +++ ++ D +
Sbjct: 78 RFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMI-DEI 136
Query: 96 DAE 98
DA+
Sbjct: 137 DAD 139
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 7 IYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDGTM 66
I+D +G++D DL R+L AL N L + ++ + DF + YD G +
Sbjct: 156 IFDKNKDGRLDLNDLARIL-ALQEN-FLLQFKXDASSQVERKRDFEKIFAHYDVSRTGAL 213
Query: 67 LGAEL 71
G E+
Sbjct: 214 EGPEV 218
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQED 63
AF D G+G + A++L + L+ L +K KV E + +K+ DK D
Sbjct: 12 AFKKLDANGDGYVTALELQTFMVTLDAYKAL--------SKDKVKEASAKLIKMADKNSD 63
Query: 64 GTM 66
G +
Sbjct: 64 GKI 66
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 49 EDFLECLKLYDKQEDGTMLGAELHHILISLGER-MEESEVNEVLQDCLDAEDEDG 102
E+ L K++D DG + E I+ +GE + ++EV E +++ DEDG
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEA----DEDG 58
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 53 ECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDC 94
E + D+ DG + +L + SLG + E+N +L++C
Sbjct: 20 EAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC 61
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 5 FDIYDTEGNGQIDAVDLGRVLYALNLNPT 33
F ++D +G G I LG L A+ NPT
Sbjct: 10 FTLFDKKGQGAIAKDSLGDYLRAIGYNPT 38
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 4 AFDIYDTEGNGQIDAVDLGRVL 25
AF++YD +GNG ID +L +L
Sbjct: 196 AFELYDQDGNGYIDENELDALL 217
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 2 KFAFDIYDTEGNGQIDAVDLGRVLYAL 28
++ F +YD +GNG ID +L ++ A+
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAI 117
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 14/72 (19%)
Query: 38 EKLGGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEESEVNEVLQDCLDA 97
E++GG K E K+ D GT+ EL L +G + ESE+ +D +DA
Sbjct: 7 EEIGGLK--------ELFKMIDTDNSGTITFDELKDGLKRVGSELMESEI----KDLMDA 54
Query: 98 EDED--GFVQYA 107
D D G + Y
Sbjct: 55 ADIDKSGTIDYG 66
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 1 AKFAFDIYDTEGNGQIDAVDLGRVLYALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDK 60
A F F+ +DT+ NG + D + L L L GT V E LYD
Sbjct: 104 AHFLFNAFDTDHNGAVSFEDFIKGLSIL-----------LRGT---VQEKLNWAFNLYDI 149
Query: 61 QEDGTMLGAELHHILISLGERM 82
+DG + E+ I+ ++ + M
Sbjct: 150 NKDGYITKEEMLDIMKAIYDMM 171
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 3 FAFDIYDTEGNGQIDAVDLGRVLYAL 28
+AF +YD +GNG I ++ ++ A+
Sbjct: 111 WAFSLYDVDGNGTISKNEVLEIVXAI 136
>pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium
pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium
pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium And Fpp Analogue
pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium And Fpp Analogue
Length = 325
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query: 26 YALNLNPTLATIEKLGGTKKKVYEDFLECLKLYDKQEDGTMLGAELHHILISLGERMEES 85
Y LNP + +EK ++YE C+ Q D + HHIL S G+R+
Sbjct: 6 YKAFLNPYIIEVEK------RLYE----CI-----QSDSETINKAAHHILSSGGKRVRPM 50
Query: 86 EVNEVLQDCLDAEDEDGFVQYAHS 109
V +L L+ +D ++ A S
Sbjct: 51 FV--LLSGFLNDTQKDDLIRTAVS 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.137 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,537,395
Number of Sequences: 62578
Number of extensions: 138832
Number of successful extensions: 864
Number of sequences better than 100.0: 206
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 385
Number of HSP's gapped (non-prelim): 355
length of query: 110
length of database: 14,973,337
effective HSP length: 74
effective length of query: 36
effective length of database: 10,342,565
effective search space: 372332340
effective search space used: 372332340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)