Query psy10942
Match_columns 537
No_of_seqs 699 out of 2804
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 22:26:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymu_A WD-40 repeat protein; u 100.0 1.2E-58 4.3E-63 468.1 47.4 447 3-537 17-576 (577)
2 1nr0_A Actin interacting prote 100.0 5.3E-58 1.8E-62 464.1 42.8 449 3-537 60-607 (611)
3 1nr0_A Actin interacting prote 100.0 3E-55 1E-59 444.0 43.9 445 4-537 20-563 (611)
4 2ymu_A WD-40 repeat protein; u 100.0 8.7E-52 3E-56 418.0 44.4 430 40-537 10-535 (577)
5 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-52 6.1E-57 459.6 37.1 459 3-537 658-1245(1249)
6 3sfz_A APAF-1, apoptotic pepti 100.0 8.8E-52 3E-56 454.2 38.4 453 3-537 616-1154(1249)
7 1pgu_A Actin interacting prote 100.0 9.7E-51 3.3E-55 413.8 42.1 446 3-537 19-610 (615)
8 2oaj_A Protein SNI1; WD40 repe 100.0 8.1E-51 2.8E-55 425.6 37.5 438 3-537 18-657 (902)
9 1pgu_A Actin interacting prote 100.0 1.1E-45 3.7E-50 376.5 43.7 419 44-537 17-568 (615)
10 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-46 4.6E-51 393.7 37.5 428 3-496 59-675 (902)
11 3mkq_A Coatomer beta'-subunit; 100.0 4.9E-45 1.7E-49 383.9 31.2 438 3-537 14-501 (814)
12 1vyh_C Platelet-activating fac 100.0 5E-44 1.7E-48 343.7 28.4 296 95-537 107-407 (410)
13 3ow8_A WD repeat-containing pr 100.0 1.6E-43 5.4E-48 328.3 28.3 281 95-537 31-317 (321)
14 3iz6_a 40S ribosomal protein R 100.0 2.9E-42 9.8E-47 328.4 29.0 308 77-537 46-371 (380)
15 2ynn_A Coatomer subunit beta'; 100.0 4.9E-42 1.7E-46 316.3 29.1 277 97-535 14-297 (304)
16 4g56_B MGC81050 protein; prote 100.0 2.1E-42 7.2E-47 325.8 25.7 311 69-537 18-339 (357)
17 1got_B GT-beta; complex (GTP-b 100.0 6.4E-42 2.2E-46 320.9 28.7 284 139-537 45-339 (340)
18 4gqb_B Methylosome protein 50; 100.0 8.7E-41 3E-45 311.9 34.0 274 221-537 28-327 (344)
19 1vyh_C Platelet-activating fac 100.0 5E-42 1.7E-46 329.8 25.6 301 44-484 107-410 (410)
20 2pbi_B Guanine nucleotide-bind 100.0 2.7E-41 9.2E-46 318.0 29.1 288 91-537 58-353 (354)
21 1r5m_A SIR4-interacting protei 100.0 1.9E-41 6.4E-46 329.0 27.2 343 76-537 24-421 (425)
22 3ow8_A WD repeat-containing pr 100.0 5.3E-41 1.8E-45 311.3 28.5 285 44-484 31-320 (321)
23 2pm9_A Protein WEB1, protein t 100.0 5.6E-42 1.9E-46 331.7 22.5 348 46-537 13-410 (416)
24 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-40 6E-45 349.3 31.9 398 44-537 12-456 (814)
25 3iz6_a 40S ribosomal protein R 100.0 1.7E-41 5.8E-46 323.0 21.7 324 25-487 45-377 (380)
26 1got_B GT-beta; complex (GTP-b 100.0 2.5E-40 8.6E-45 310.0 29.0 288 40-482 49-340 (340)
27 1r5m_A SIR4-interacting protei 100.0 3.6E-40 1.2E-44 319.9 31.0 317 3-484 46-424 (425)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.3E-40 7.9E-45 310.8 27.2 289 88-537 6-331 (345)
29 3frx_A Guanine nucleotide-bind 100.0 9.9E-40 3.4E-44 303.0 29.4 286 90-537 10-313 (319)
30 4ery_A WD repeat-containing pr 100.0 8.5E-40 2.9E-44 303.2 27.6 284 91-537 17-308 (312)
31 3vl1_A 26S proteasome regulato 100.0 8.1E-40 2.8E-44 316.9 28.2 347 5-485 59-419 (420)
32 4gqb_B Methylosome protein 50; 100.0 3.3E-40 1.1E-44 308.1 23.5 301 79-487 16-333 (344)
33 2hes_X YDR267CP; beta-propelle 100.0 1E-39 3.4E-44 304.5 26.0 296 89-537 6-324 (330)
34 2ynn_A Coatomer subunit beta'; 100.0 3.8E-39 1.3E-43 297.0 29.1 282 44-485 12-302 (304)
35 2pm9_A Protein WEB1, protein t 100.0 7.3E-41 2.5E-45 323.9 17.8 337 4-486 14-415 (416)
36 1erj_A Transcriptional repress 100.0 1.7E-39 5.8E-44 310.7 27.0 288 91-537 59-385 (393)
37 2pbi_B Guanine nucleotide-bind 100.0 3E-39 1E-43 304.1 27.7 292 39-482 57-354 (354)
38 3frx_A Guanine nucleotide-bind 100.0 8.7E-39 3E-43 296.6 29.5 293 39-486 10-318 (319)
39 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.6E-39 1.2E-43 302.7 26.2 320 37-492 6-342 (345)
40 4g56_B MGC81050 protein; prote 100.0 4.4E-39 1.5E-43 303.2 26.4 314 14-487 15-345 (357)
41 1gxr_A ESG1, transducin-like e 100.0 1.8E-38 6E-43 298.0 28.9 312 97-537 10-333 (337)
42 3vl1_A 26S proteasome regulato 100.0 2.9E-39 1E-43 313.0 24.0 330 66-537 67-415 (420)
43 2xzm_R RACK1; ribosome, transl 100.0 1.3E-38 4.4E-43 299.0 27.4 290 90-537 14-336 (343)
44 1erj_A Transcriptional repress 100.0 2.1E-38 7.3E-43 303.1 28.0 316 28-485 42-389 (393)
45 1gxr_A ESG1, transducin-like e 100.0 2.8E-38 9.5E-43 296.6 28.3 317 3-483 10-335 (337)
46 4aow_A Guanine nucleotide-bind 100.0 3E-37 1E-41 290.0 31.0 295 83-537 24-333 (340)
47 2xzm_R RACK1; ribosome, transl 100.0 7.8E-38 2.7E-42 293.6 25.8 307 39-487 14-342 (343)
48 3zwl_B Eukaryotic translation 100.0 2.5E-37 8.7E-42 293.9 27.9 290 95-537 31-342 (369)
49 4ery_A WD repeat-containing pr 100.0 4.8E-37 1.7E-41 284.6 28.8 285 44-484 22-311 (312)
50 2hes_X YDR267CP; beta-propelle 100.0 2.8E-37 9.6E-42 287.9 26.0 305 35-485 3-328 (330)
51 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-38 4.8E-43 311.7 16.2 345 3-537 134-513 (524)
52 4aow_A Guanine nucleotide-bind 100.0 4.5E-36 1.5E-40 281.9 31.3 293 34-487 26-339 (340)
53 1k8k_C P40, ARP2/3 complex 41 100.0 7.2E-37 2.5E-41 291.2 24.7 298 95-537 7-357 (372)
54 3ei3_B DNA damage-binding prot 100.0 3.4E-37 1.2E-41 294.5 22.5 293 81-537 57-378 (383)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.9E-36 1E-40 293.9 29.0 305 90-537 111-438 (445)
56 3dm0_A Maltose-binding peripla 100.0 3.1E-36 1.1E-40 310.0 30.1 295 96-537 382-689 (694)
57 1sq9_A Antiviral protein SKI8; 100.0 3.7E-36 1.3E-40 288.9 26.7 298 95-537 15-391 (397)
58 3v7d_B Cell division control p 100.0 1.4E-35 4.8E-40 290.9 30.7 317 92-537 116-459 (464)
59 4h5i_A Guanine nucleotide-exch 100.0 1.9E-35 6.4E-40 279.1 30.1 299 97-537 15-339 (365)
60 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-35 3.9E-40 289.7 29.5 292 66-485 128-442 (445)
61 3zwl_B Eukaryotic translation 100.0 3.7E-35 1.3E-39 279.0 31.0 301 3-492 33-353 (369)
62 4a11_B DNA excision repair pro 100.0 3.9E-36 1.3E-40 289.9 22.8 335 75-537 21-401 (408)
63 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-35 6.6E-40 274.2 26.4 277 88-537 9-292 (313)
64 3ei3_B DNA damage-binding prot 100.0 4.4E-36 1.5E-40 286.8 21.6 311 32-485 59-382 (383)
65 4gga_A P55CDC, cell division c 100.0 9.8E-36 3.3E-40 287.6 24.2 282 68-499 117-409 (420)
66 3dwl_C Actin-related protein 2 100.0 8.5E-37 2.9E-41 291.2 15.9 257 97-484 12-280 (377)
67 1sq9_A Antiviral protein SKI8; 100.0 1.8E-34 6.1E-39 277.2 31.9 314 3-487 17-397 (397)
68 3i2n_A WD repeat-containing pr 100.0 4.5E-35 1.5E-39 277.1 27.2 287 95-537 17-349 (357)
69 3gre_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 296.5 16.5 311 103-537 34-436 (437)
70 4h5i_A Guanine nucleotide-exch 100.0 2.1E-35 7.3E-40 278.7 23.7 299 1-443 13-343 (365)
71 4e54_B DNA damage-binding prot 100.0 1.5E-35 5.2E-40 287.5 22.0 285 97-537 120-426 (435)
72 3k26_A Polycomb protein EED; W 100.0 8.7E-36 3E-40 283.0 19.9 324 3-484 19-365 (366)
73 3dm0_A Maltose-binding peripla 100.0 4.6E-35 1.6E-39 301.3 26.7 285 44-484 381-692 (694)
74 4a11_B DNA excision repair pro 100.0 9.7E-36 3.3E-40 287.1 19.0 348 24-485 21-405 (408)
75 3dw8_B Serine/threonine-protei 100.0 6E-35 2.1E-39 285.1 24.3 324 93-537 25-442 (447)
76 3i2n_A WD repeat-containing pr 100.0 5.4E-35 1.8E-39 276.5 23.0 292 44-488 17-356 (357)
77 2pm7_B Protein transport prote 100.0 5.4E-34 1.9E-38 261.6 28.3 251 220-537 6-281 (297)
78 3gre_A Serine/threonine-protei 100.0 5.9E-36 2E-40 291.3 15.9 323 14-482 37-437 (437)
79 3k26_A Polycomb protein EED; W 100.0 1.4E-35 4.7E-40 281.6 17.6 305 95-537 17-362 (366)
80 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-36 2.3E-40 292.6 15.8 319 14-485 171-517 (524)
81 3v7d_B Cell division control p 100.0 6.6E-34 2.2E-38 279.1 29.3 316 5-481 125-459 (464)
82 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-35 1.7E-39 278.5 20.7 304 44-487 7-363 (372)
83 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-34 6.2E-39 267.6 23.8 292 37-492 9-303 (313)
84 4ggc_A P55CDC, cell division c 100.0 1E-33 3.5E-38 263.2 25.4 269 69-487 38-317 (318)
85 4gga_A P55CDC, cell division c 100.0 1.4E-33 4.9E-38 272.4 27.0 276 98-537 107-391 (420)
86 2w18_A PALB2, fancn, partner a 100.0 1.3E-32 4.4E-37 245.7 30.5 292 98-537 41-353 (356)
87 4aez_A CDC20, WD repeat-contai 100.0 4.6E-34 1.6E-38 274.2 22.5 272 69-493 105-388 (401)
88 4e54_B DNA damage-binding prot 100.0 9.8E-35 3.3E-39 281.8 18.0 284 3-350 120-429 (435)
89 2pm7_B Protein transport prote 100.0 7.9E-34 2.7E-38 260.5 22.9 258 95-484 8-284 (297)
90 4aez_A CDC20, WD repeat-contai 100.0 1.1E-33 3.8E-38 271.5 23.9 272 98-537 95-376 (401)
91 3dwl_C Actin-related protein 2 100.0 1.6E-34 5.5E-39 275.4 16.8 299 45-483 11-377 (377)
92 2j04_A TAU60, YPL007P, hypothe 100.0 3.2E-35 1.1E-39 279.8 10.7 319 2-530 15-350 (588)
93 1yfq_A Cell cycle arrest prote 100.0 2.6E-33 9E-38 263.3 23.7 283 95-533 10-315 (342)
94 3bg1_A Protein SEC13 homolog; 100.0 8.6E-34 2.9E-38 262.6 19.2 263 95-484 12-292 (316)
95 4ggc_A P55CDC, cell division c 100.0 8.6E-33 2.9E-37 256.9 25.9 275 99-537 28-311 (318)
96 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-33 5.2E-38 268.3 20.8 267 96-537 15-293 (588)
97 3mmy_A MRNA export factor; mRN 100.0 5.4E-33 1.9E-37 263.9 23.3 291 82-535 24-340 (368)
98 3bg1_A Protein SEC13 homolog; 100.0 1E-33 3.4E-38 262.2 16.3 256 221-537 11-289 (316)
99 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-32 7.2E-37 265.6 24.5 266 97-537 134-410 (435)
100 3dw8_B Serine/threonine-protei 100.0 2.3E-32 7.8E-37 266.9 20.2 328 41-484 24-445 (447)
101 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-31 5.1E-36 251.9 23.2 266 95-492 10-344 (351)
102 1p22_A F-BOX/WD-repeat protein 100.0 4.3E-32 1.5E-36 263.4 19.6 269 66-491 142-420 (435)
103 3f3f_A Nucleoporin SEH1; struc 100.0 7.5E-31 2.6E-35 247.1 27.5 248 221-537 9-333 (351)
104 1yfq_A Cell cycle arrest prote 100.0 2.9E-31 9.8E-36 249.4 23.8 285 44-482 10-321 (342)
105 1l0q_A Surface layer protein; 100.0 3.4E-30 1.2E-34 246.8 30.7 330 16-528 2-365 (391)
106 1l0q_A Surface layer protein; 100.0 4E-30 1.4E-34 246.3 30.8 278 68-499 3-289 (391)
107 3jrp_A Fusion protein of prote 100.0 1.8E-31 6.1E-36 254.5 21.0 258 88-486 2-288 (379)
108 3bws_A Protein LP49; two-domai 100.0 5.2E-30 1.8E-34 249.1 31.4 300 70-537 92-428 (433)
109 3vu4_A KMHSV2; beta-propeller 100.0 7.9E-30 2.7E-34 239.9 31.1 276 221-537 17-332 (355)
110 1k32_A Tricorn protease; prote 100.0 1E-29 3.5E-34 272.8 35.6 424 5-537 17-498 (1045)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-31 4.8E-36 257.2 18.0 282 66-489 46-346 (402)
112 2xyi_A Probable histone-bindin 100.0 1.2E-30 4E-35 252.6 24.4 296 98-537 47-406 (430)
113 3bws_A Protein LP49; two-domai 100.0 8.9E-30 3E-34 247.4 30.7 308 23-485 96-432 (433)
114 3jrp_A Fusion protein of prote 100.0 7.3E-31 2.5E-35 250.3 22.0 248 140-537 2-283 (379)
115 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-31 4.7E-36 257.2 16.4 279 99-537 37-338 (402)
116 4gq1_A NUP37; propeller, trans 100.0 1.2E-30 4E-35 249.2 22.6 236 286-535 102-384 (393)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-30 9.5E-35 251.8 25.6 284 97-537 5-387 (450)
118 1k32_A Tricorn protease; prote 100.0 9.4E-29 3.2E-33 265.3 36.9 425 4-537 54-633 (1045)
119 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-29 3.7E-34 247.6 26.9 349 2-484 4-390 (450)
120 3mmy_A MRNA export factor; mRN 100.0 2.5E-30 8.6E-35 245.5 20.6 305 31-483 24-344 (368)
121 1nir_A Nitrite reductase; hemo 100.0 2.2E-29 7.4E-34 248.8 26.5 332 9-495 144-524 (543)
122 3vu4_A KMHSV2; beta-propeller 100.0 1E-29 3.6E-34 239.1 22.4 293 81-486 3-337 (355)
123 2w18_A PALB2, fancn, partner a 100.0 9.6E-29 3.3E-33 220.8 27.3 287 18-483 56-355 (356)
124 2xyi_A Probable histone-bindin 100.0 4.3E-29 1.5E-33 241.6 26.7 264 93-486 125-411 (430)
125 3lrv_A PRE-mRNA-splicing facto 100.0 4.8E-30 1.6E-34 240.7 18.9 273 103-537 43-329 (343)
126 3jro_A Fusion protein of prote 100.0 2.3E-30 7.8E-35 267.7 17.3 249 96-485 9-285 (753)
127 3jro_A Fusion protein of prote 100.0 8.1E-29 2.8E-33 256.1 25.8 247 220-537 6-281 (753)
128 4gq1_A NUP37; propeller, trans 100.0 1E-29 3.4E-34 242.7 17.3 285 97-483 90-387 (393)
129 3lrv_A PRE-mRNA-splicing facto 100.0 3.2E-29 1.1E-33 235.1 17.1 233 160-537 46-288 (343)
130 1nir_A Nitrite reductase; hemo 100.0 2.2E-27 7.6E-32 234.4 25.7 317 66-537 148-510 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 3E-27 1E-31 226.8 19.3 293 66-523 74-410 (415)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.1E-26 7.1E-31 220.9 21.6 308 5-467 65-410 (415)
133 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-25 3.8E-30 233.9 25.0 351 4-492 38-465 (741)
134 2ecf_A Dipeptidyl peptidase IV 99.9 5.4E-25 1.8E-29 228.7 24.5 318 97-530 37-444 (741)
135 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-24 4.5E-29 224.4 24.6 329 6-487 29-437 (706)
136 1xfd_A DIP, dipeptidyl aminope 99.9 4.9E-25 1.7E-29 228.4 19.6 341 66-529 27-428 (723)
137 2z3z_A Dipeptidyl aminopeptida 99.9 2.7E-23 9.3E-28 214.6 25.2 337 68-537 37-431 (706)
138 1pby_B Quinohemoprotein amine 99.9 4.5E-23 1.6E-27 192.9 24.3 297 17-454 2-321 (337)
139 3u4y_A Uncharacterized protein 99.9 1.6E-22 5.6E-27 188.6 25.9 277 66-487 9-306 (331)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-23 4.2E-28 217.9 19.6 354 5-492 19-450 (723)
141 2ojh_A Uncharacterized protein 99.9 8E-23 2.7E-27 187.3 20.1 255 114-532 18-293 (297)
142 1ri6_A Putative isomerase YBHE 99.9 1.7E-22 5.9E-27 189.4 22.6 313 66-524 4-336 (343)
143 2ojh_A Uncharacterized protein 99.9 5.2E-23 1.8E-27 188.6 18.0 258 73-476 18-293 (297)
144 1pby_B Quinohemoprotein amine 99.9 4E-22 1.4E-26 186.4 20.9 301 68-497 2-322 (337)
145 3vgz_A Uncharacterized protein 99.9 4.6E-21 1.6E-25 180.5 27.7 274 97-531 41-334 (353)
146 1ri6_A Putative isomerase YBHE 99.9 3.5E-21 1.2E-25 180.5 26.1 309 17-467 6-335 (343)
147 3u4y_A Uncharacterized protein 99.9 4.4E-21 1.5E-25 178.9 26.0 276 102-537 3-300 (331)
148 1z68_A Fibroblast activation p 99.9 7E-22 2.4E-26 204.4 21.0 354 7-493 20-451 (719)
149 3vgz_A Uncharacterized protein 99.9 1.3E-20 4.5E-25 177.3 24.4 281 39-476 34-335 (353)
150 3o4h_A Acylamino-acid-releasin 99.9 1E-21 3.4E-26 197.9 16.9 261 97-533 22-304 (582)
151 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-20 5.3E-25 176.6 22.6 300 6-453 3-335 (349)
152 3hfq_A Uncharacterized protein 99.9 4.9E-20 1.7E-24 173.0 24.1 282 75-489 14-323 (347)
153 1z68_A Fibroblast activation p 99.9 1.5E-21 5.1E-26 201.9 14.1 336 66-528 26-427 (719)
154 3pe7_A Oligogalacturonate lyas 99.8 1.9E-20 6.6E-25 178.7 16.5 316 81-537 14-378 (388)
155 3hfq_A Uncharacterized protein 99.8 4.5E-19 1.5E-23 166.4 25.1 286 110-537 4-313 (347)
156 1jmx_B Amine dehydrogenase; ox 99.8 2.8E-19 9.6E-24 167.9 23.7 305 66-495 10-335 (349)
157 4a5s_A Dipeptidyl peptidase 4 99.8 1.8E-18 6.3E-23 178.8 30.5 373 5-529 19-434 (740)
158 3o4h_A Acylamino-acid-releasin 99.8 5.1E-20 1.7E-24 185.5 16.8 232 3-349 22-274 (582)
159 2oit_A Nucleoporin 214KDA; NH2 99.8 3.2E-19 1.1E-23 171.5 19.5 180 321-533 37-264 (434)
160 2oit_A Nucleoporin 214KDA; NH2 99.8 2.9E-18 1E-22 164.7 25.4 171 221-486 90-279 (434)
161 4a5s_A Dipeptidyl peptidase 4 99.8 1.9E-19 6.6E-24 186.0 17.8 299 98-499 18-366 (740)
162 3scy_A Hypothetical bacterial 99.8 2.1E-18 7.2E-23 162.7 23.5 248 225-537 49-333 (361)
163 3scy_A Hypothetical bacterial 99.8 2.6E-18 9E-23 162.1 24.1 297 67-491 13-345 (361)
164 2oiz_A Aromatic amine dehydrog 99.8 2.9E-18 9.9E-23 160.8 23.4 299 75-523 29-360 (361)
165 2oiz_A Aromatic amine dehydrog 99.8 4.8E-18 1.7E-22 159.3 20.8 104 13-127 12-140 (361)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.3E-17 1.1E-21 154.5 25.9 284 77-486 14-342 (365)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.8E-17 1.6E-21 153.4 26.3 158 319-537 143-337 (365)
168 1qks_A Cytochrome CD1 nitrite 99.8 1.6E-16 5.5E-21 156.3 28.6 329 14-494 165-547 (567)
169 3c5m_A Oligogalacturonate lyas 99.8 5.8E-18 2E-22 162.0 17.6 320 80-537 13-378 (396)
170 3pe7_A Oligogalacturonate lyas 99.8 3.4E-18 1.2E-22 163.1 15.6 310 29-483 13-380 (388)
171 3fvz_A Peptidyl-glycine alpha- 99.8 3.8E-16 1.3E-20 144.9 26.1 262 225-537 23-318 (329)
172 3azo_A Aminopeptidase; POP fam 99.7 6.1E-17 2.1E-21 165.8 21.1 300 66-496 34-380 (662)
173 3c5m_A Oligogalacturonate lyas 99.7 4.9E-17 1.7E-21 155.5 18.2 304 29-488 13-387 (396)
174 3azo_A Aminopeptidase; POP fam 99.7 3.7E-16 1.3E-20 159.9 21.7 204 4-260 25-271 (662)
175 1qks_A Cytochrome CD1 nitrite 99.7 7E-15 2.4E-19 144.7 27.3 319 66-536 166-533 (567)
176 1q7f_A NHL, brain tumor CG1071 99.7 7.9E-14 2.7E-18 126.6 27.0 107 414-537 165-276 (286)
177 2gop_A Trilobed protease; beta 99.6 8.9E-15 3E-19 137.0 19.5 285 97-537 15-327 (347)
178 1q7f_A NHL, brain tumor CG1071 99.6 7.9E-14 2.7E-18 126.6 24.4 242 97-486 30-281 (286)
179 3fvz_A Peptidyl-glycine alpha- 99.6 1.8E-14 6.3E-19 133.4 19.1 260 97-484 24-321 (329)
180 2dg1_A DRP35, lactonase; beta 99.6 2.7E-13 9.2E-18 126.1 26.2 256 225-531 5-300 (333)
181 2gop_A Trilobed protease; beta 99.6 1.9E-14 6.4E-19 134.8 17.1 270 76-499 42-343 (347)
182 3e5z_A Putative gluconolactona 99.6 7.7E-13 2.6E-17 120.7 26.4 205 287-536 42-282 (296)
183 3sjl_D Methylamine dehydrogena 99.6 2.2E-13 7.6E-18 125.4 22.1 115 10-146 38-177 (386)
184 3e5z_A Putative gluconolactona 99.6 1E-13 3.5E-18 126.5 19.9 259 97-488 28-289 (296)
185 3dsm_A Uncharacterized protein 99.6 1E-12 3.6E-17 121.4 26.5 211 286-537 55-298 (328)
186 2xdw_A Prolyl endopeptidase; a 99.6 1.3E-13 4.3E-18 142.0 22.0 251 148-527 123-396 (710)
187 2xdw_A Prolyl endopeptidase; a 99.6 2.6E-13 8.9E-18 139.7 23.5 253 98-487 126-416 (710)
188 2mad_H Methylamine dehydrogena 99.6 2.7E-12 9.3E-17 120.2 27.3 104 12-127 28-156 (373)
189 3dsm_A Uncharacterized protein 99.6 4.1E-13 1.4E-17 124.1 21.1 287 24-463 15-320 (328)
190 2dg1_A DRP35, lactonase; beta 99.5 1.1E-12 3.8E-17 121.9 23.4 276 67-476 17-301 (333)
191 3sjl_D Methylamine dehydrogena 99.5 4.9E-13 1.7E-17 123.2 19.4 292 66-495 43-373 (386)
192 2mad_H Methylamine dehydrogena 99.5 8.7E-11 3E-15 110.0 34.6 77 415-492 269-357 (373)
193 3no2_A Uncharacterized protein 99.5 4E-12 1.4E-16 113.9 24.1 212 286-528 6-230 (276)
194 3c75_H MADH, methylamine dehyd 99.5 7E-13 2.4E-17 124.5 19.5 115 11-147 79-218 (426)
195 2bkl_A Prolyl endopeptidase; m 99.5 8.8E-14 3E-18 142.7 13.8 143 12-172 75-248 (695)
196 1rwi_B Serine/threonine-protei 99.5 4.7E-12 1.6E-16 113.7 21.8 214 287-537 37-260 (270)
197 2z2n_A Virginiamycin B lyase; 99.5 2.4E-10 8E-15 104.2 33.2 262 225-535 14-290 (299)
198 2bkl_A Prolyl endopeptidase; m 99.5 8.8E-13 3E-17 135.3 18.5 279 105-527 76-379 (695)
199 1yr2_A Prolyl oligopeptidase; 99.4 5.8E-12 2E-16 130.1 20.9 253 98-492 164-447 (741)
200 3c75_H MADH, methylamine dehyd 99.4 6.1E-12 2.1E-16 118.2 18.7 278 77-492 99-409 (426)
201 1rwi_B Serine/threonine-protei 99.4 2.2E-12 7.4E-17 115.9 15.3 240 98-487 25-266 (270)
202 1yr2_A Prolyl oligopeptidase; 99.4 5.6E-12 1.9E-16 130.3 19.9 283 105-526 115-422 (741)
203 2z2n_A Virginiamycin B lyase; 99.4 1.2E-10 4E-15 106.2 26.5 279 97-487 15-297 (299)
204 3no2_A Uncharacterized protein 99.4 3.2E-10 1.1E-14 101.5 25.8 225 239-496 4-263 (276)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.7E-10 5.7E-15 106.1 23.4 210 291-536 42-294 (314)
206 3g4e_A Regucalcin; six bladed 99.4 5.9E-10 2E-14 101.4 26.3 219 286-530 26-261 (297)
207 1kb0_A Quinohemoprotein alcoho 99.4 1E-10 3.6E-15 118.4 23.4 383 15-528 76-537 (677)
208 2qc5_A Streptogramin B lactona 99.3 4.1E-09 1.4E-13 96.0 31.8 258 225-529 19-290 (300)
209 1xip_A Nucleoporin NUP159; bet 99.3 3.8E-11 1.3E-15 111.2 17.0 164 322-528 39-231 (388)
210 2qc5_A Streptogramin B lactona 99.3 7.8E-10 2.7E-14 100.8 24.4 273 97-483 20-298 (300)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2.9E-09 9.8E-14 97.8 26.8 237 225-485 17-299 (314)
212 1mda_H Methylamine dehydrogena 99.3 3.1E-10 1.1E-14 104.9 20.1 278 68-464 33-366 (368)
213 2ghs_A AGR_C_1268P; regucalcin 99.3 6.5E-09 2.2E-13 95.8 28.6 200 286-530 62-291 (326)
214 3dr2_A Exported gluconolactona 99.2 2.4E-09 8.2E-14 97.8 24.1 206 287-536 59-302 (305)
215 4a2l_A BT_4663, two-component 99.2 1E-07 3.5E-12 99.4 38.9 397 4-488 89-529 (795)
216 1yiq_A Quinohemoprotein alcoho 99.2 2.3E-10 7.8E-15 116.2 18.4 124 325-470 393-533 (689)
217 3hrp_A Uncharacterized protein 99.2 4.8E-09 1.6E-13 99.6 25.9 222 286-536 143-405 (409)
218 1yiq_A Quinohemoprotein alcoho 99.2 1.4E-09 4.9E-14 110.3 23.6 271 239-527 120-534 (689)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.2 7.3E-09 2.5E-13 97.8 26.9 253 239-537 102-374 (376)
220 4a2l_A BT_4663, two-component 99.2 2.1E-07 7.1E-12 97.0 40.0 420 5-528 133-603 (795)
221 2qe8_A Uncharacterized protein 99.2 9.6E-10 3.3E-14 102.2 19.9 200 318-532 64-312 (343)
222 3g4e_A Regucalcin; six bladed 99.2 1.3E-09 4.4E-14 99.1 19.7 243 98-474 14-261 (297)
223 3hrp_A Uncharacterized protein 99.2 1.2E-09 4E-14 103.8 19.4 253 4-349 132-408 (409)
224 1xip_A Nucleoporin NUP159; bet 99.2 5.9E-10 2E-14 103.2 15.5 159 286-473 50-232 (388)
225 3iuj_A Prolyl endopeptidase; h 99.2 4.9E-09 1.7E-13 107.2 23.3 231 221-529 126-389 (693)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.6E-08 5.4E-13 95.4 25.2 293 69-440 55-375 (376)
227 2hz6_A Endoplasmic reticulum t 99.1 2.3E-11 7.7E-16 114.2 4.9 179 286-495 10-202 (369)
228 3iuj_A Prolyl endopeptidase; h 99.1 1.1E-09 3.9E-14 111.9 17.5 69 419-488 332-408 (693)
229 3dr2_A Exported gluconolactona 99.1 5.6E-09 1.9E-13 95.3 19.3 246 97-477 45-299 (305)
230 1mda_H Methylamine dehydrogena 99.0 3.1E-09 1.1E-13 98.2 13.7 127 362-497 219-358 (368)
231 2ece_A 462AA long hypothetical 99.0 6.4E-08 2.2E-12 89.8 22.1 222 286-529 97-399 (462)
232 2iwa_A Glutamine cyclotransfer 99.0 1.7E-07 5.7E-12 81.7 23.0 190 322-535 22-231 (266)
233 3nol_A Glutamine cyclotransfer 99.0 8.4E-08 2.9E-12 82.4 20.5 183 322-530 44-244 (262)
234 1kb0_A Quinohemoprotein alcoho 99.0 8.6E-08 2.9E-12 97.1 22.4 226 286-537 129-503 (677)
235 3v9f_A Two-component system se 98.9 1.6E-05 5.5E-10 82.6 40.0 426 5-533 68-560 (781)
236 3hxj_A Pyrrolo-quinoline quino 98.9 1E-07 3.4E-12 88.1 20.3 202 286-536 108-319 (330)
237 1fwx_A Nitrous oxide reductase 98.9 3.9E-07 1.3E-11 87.8 24.2 229 286-530 103-407 (595)
238 3v9f_A Two-component system se 98.9 1.3E-05 4.5E-10 83.3 37.9 396 5-488 117-571 (781)
239 1fwx_A Nitrous oxide reductase 98.9 4.5E-08 1.5E-12 94.2 17.4 142 18-172 17-216 (595)
240 3mbr_X Glutamine cyclotransfer 98.9 1E-06 3.6E-11 75.0 24.0 184 320-530 20-223 (243)
241 2hz6_A Endoplasmic reticulum t 98.9 6.7E-10 2.3E-14 104.1 4.6 182 12-263 5-194 (369)
242 2ghs_A AGR_C_1268P; regucalcin 98.9 3.2E-06 1.1E-10 77.7 27.6 218 227-474 50-291 (326)
243 3hxj_A Pyrrolo-quinoline quino 98.9 1.3E-07 4.3E-12 87.4 18.3 292 16-485 30-324 (330)
244 1flg_A Protein (quinoprotein e 98.9 7.4E-07 2.5E-11 88.3 24.4 81 433-527 465-545 (582)
245 3nok_A Glutaminyl cyclase; bet 98.8 5.8E-07 2E-11 77.2 20.2 183 321-530 55-254 (268)
246 2qe8_A Uncharacterized protein 98.8 2.3E-07 7.9E-12 86.0 18.4 190 321-537 17-274 (343)
247 2ad6_A Methanol dehydrogenase 98.8 9.5E-07 3.2E-11 87.5 22.5 157 287-470 318-522 (571)
248 3s94_A LRP-6, low-density lipo 98.7 0.00028 9.4E-09 70.4 40.0 143 5-169 42-189 (619)
249 1kv9_A Type II quinohemoprotei 98.7 3.7E-06 1.2E-10 85.2 25.6 200 294-496 177-499 (668)
250 1w6s_A Methanol dehydrogenase 98.7 1E-06 3.5E-11 87.2 20.5 108 15-127 61-191 (599)
251 2ad6_A Methanol dehydrogenase 98.7 9.5E-06 3.2E-10 80.3 27.3 226 287-527 162-523 (571)
252 2ece_A 462AA long hypothetical 98.7 1.2E-05 4.1E-10 74.8 25.5 189 330-536 93-347 (462)
253 1kv9_A Type II quinohemoprotei 98.7 2.1E-06 7.1E-11 87.0 21.4 225 286-537 118-484 (668)
254 1w6s_A Methanol dehydrogenase 98.6 2.3E-05 7.9E-10 77.6 27.4 81 432-526 451-531 (599)
255 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00066 2.3E-08 67.8 40.2 143 5-170 39-185 (628)
256 2iwa_A Glutamine cyclotransfer 98.5 4E-07 1.4E-11 79.3 10.5 199 5-261 23-237 (266)
257 3ei3_A DNA damage-binding prot 98.5 0.00034 1.2E-08 74.7 34.8 87 28-127 494-591 (1158)
258 3nol_A Glutamine cyclotransfer 98.5 5.5E-07 1.9E-11 77.4 10.6 186 5-248 45-244 (262)
259 3mbr_X Glutamine cyclotransfer 98.5 1.5E-06 5.2E-11 74.0 13.1 185 5-248 23-223 (243)
260 3nok_A Glutaminyl cyclase; bet 98.5 5.8E-07 2E-11 77.2 9.5 117 5-147 57-173 (268)
261 1npe_A Nidogen, entactin; glyc 98.5 0.00014 4.6E-09 64.5 25.4 175 295-488 10-201 (267)
262 1npe_A Nidogen, entactin; glyc 98.5 0.00036 1.2E-08 61.8 28.0 199 286-523 49-263 (267)
263 2fp8_A Strictosidine synthase; 98.4 8.1E-05 2.8E-09 68.1 23.8 80 414-495 186-278 (322)
264 2p4o_A Hypothetical protein; p 98.3 0.00041 1.4E-08 62.8 24.1 211 287-531 45-278 (306)
265 3s94_A LRP-6, low-density lipo 98.2 0.0057 2E-07 61.0 39.8 130 18-169 11-145 (619)
266 3qqz_A Putative uncharacterize 98.2 0.00039 1.3E-08 60.1 21.1 204 315-535 21-247 (255)
267 1flg_A Protein (quinoprotein e 98.2 0.00084 2.9E-08 66.5 26.4 140 375-537 291-512 (582)
268 3ei3_A DNA damage-binding prot 98.2 0.012 3.9E-07 63.2 37.1 114 3-124 554-679 (1158)
269 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0072 2.5E-07 60.3 39.6 181 24-261 13-197 (628)
270 3v65_B Low-density lipoprotein 98.1 0.0022 7.5E-08 60.0 25.8 180 294-487 95-279 (386)
271 1k3i_A Galactose oxidase precu 98.1 0.00019 6.6E-09 72.7 19.5 268 235-530 192-530 (656)
272 3v64_C Agrin; beta propeller, 98.1 0.0062 2.1E-07 56.1 27.5 169 294-486 52-235 (349)
273 1k3i_A Galactose oxidase precu 98.0 0.00011 3.7E-09 74.5 16.4 62 66-127 197-274 (656)
274 3p5b_L Low density lipoprotein 98.0 0.013 4.5E-07 55.0 28.2 171 294-487 91-279 (400)
275 2fp8_A Strictosidine synthase; 97.9 0.00082 2.8E-08 61.3 19.3 149 322-485 20-216 (322)
276 3tc9_A Hypothetical hydrolase; 97.9 0.0066 2.3E-07 57.7 25.8 180 287-489 151-374 (430)
277 2xe4_A Oligopeptidase B; hydro 97.9 0.001 3.6E-08 68.4 20.3 148 322-485 175-354 (751)
278 1ijq_A LDL receptor, low-densi 97.9 0.015 5E-07 52.7 28.7 177 295-485 10-195 (316)
279 2p4o_A Hypothetical protein; p 97.8 0.0096 3.3E-07 53.7 24.0 183 321-536 32-237 (306)
280 3sov_A LRP-6, low-density lipo 97.7 0.023 7.8E-07 51.4 25.5 171 294-485 12-197 (318)
281 4hw6_A Hypothetical protein, I 97.7 0.01 3.5E-07 56.4 23.5 179 288-489 155-377 (433)
282 3v65_B Low-density lipoprotein 97.7 0.022 7.6E-07 53.2 25.4 183 287-493 130-326 (386)
283 2xzh_A Clathrin heavy chain 1; 97.7 0.023 7.7E-07 50.2 22.8 237 236-487 74-334 (365)
284 3amr_A 3-phytase; beta-propell 97.7 0.014 4.8E-07 52.5 22.0 181 287-493 42-272 (355)
285 2xzh_A Clathrin heavy chain 1; 97.7 0.024 8.3E-07 50.1 24.8 120 23-168 46-169 (365)
286 3qqz_A Putative uncharacterize 97.7 0.0016 5.6E-08 56.3 15.2 110 4-126 28-150 (255)
287 3m0c_C LDL receptor, low-densi 97.6 0.047 1.6E-06 55.9 26.8 172 294-488 403-592 (791)
288 1bpo_A Protein (clathrin); cla 97.5 0.059 2E-06 49.7 23.6 237 236-487 73-333 (494)
289 3tc9_A Hypothetical hydrolase; 97.5 0.0034 1.2E-07 59.7 16.4 107 414-536 180-296 (430)
290 3v64_C Agrin; beta propeller, 97.5 0.061 2.1E-06 49.4 27.0 184 287-493 87-283 (349)
291 3amr_A 3-phytase; beta-propell 97.5 0.028 9.7E-07 50.6 20.5 177 332-536 40-258 (355)
292 1bpo_A Protein (clathrin); cla 97.4 0.073 2.5E-06 49.1 23.3 119 23-167 45-167 (494)
293 2xe4_A Oligopeptidase B; hydro 97.4 0.0017 5.9E-08 66.8 14.4 112 356-486 176-305 (751)
294 2p9w_A MAL S 1 allergenic prot 97.3 0.083 2.8E-06 47.1 22.3 156 323-485 15-215 (334)
295 3kya_A Putative phosphatase; s 97.3 0.11 3.7E-06 49.7 23.9 199 287-494 154-417 (496)
296 1ijq_A LDL receptor, low-densi 97.3 0.089 3.1E-06 47.5 22.8 102 414-530 78-183 (316)
297 2p9w_A MAL S 1 allergenic prot 97.3 0.016 5.6E-07 51.6 16.8 158 356-535 15-209 (334)
298 3sov_A LRP-6, low-density lipo 97.2 0.13 4.4E-06 46.4 23.4 183 287-492 49-245 (318)
299 1n7d_A LDL receptor, low-densi 97.1 0.0048 1.6E-07 62.6 13.6 170 294-486 385-572 (699)
300 3ott_A Two-component system se 97.1 0.36 1.2E-05 49.7 40.8 394 5-490 65-507 (758)
301 4hw6_A Hypothetical protein, I 97.0 0.063 2.1E-06 50.9 19.6 155 322-484 140-303 (433)
302 3sre_A PON1, serum paraoxonase 97.0 0.085 2.9E-06 48.1 19.5 100 414-531 166-287 (355)
303 3pbp_A Nucleoporin NUP82; beta 97.0 0.047 1.6E-06 50.3 17.0 115 414-535 67-206 (452)
304 3p5b_L Low density lipoprotein 96.8 0.35 1.2E-05 45.3 29.6 187 287-493 126-328 (400)
305 3sre_A PON1, serum paraoxonase 96.8 0.3 1E-05 44.5 21.5 69 414-483 222-296 (355)
306 2vpj_A Kelch-like protein 12; 96.7 0.18 6.1E-06 45.0 19.3 171 295-489 31-235 (301)
307 1n7d_A LDL receptor, low-densi 96.7 0.035 1.2E-06 56.3 15.7 80 414-494 541-623 (699)
308 3ii7_A Kelch-like protein 7; p 96.7 0.26 8.9E-06 44.1 19.8 175 287-487 14-227 (306)
309 4asc_A Kelch repeat and BTB do 96.5 0.39 1.3E-05 43.1 20.2 175 287-488 7-224 (315)
310 2xn4_A Kelch-like protein 2; s 96.5 0.44 1.5E-05 42.5 20.6 176 287-488 18-232 (302)
311 3m0c_C LDL receptor, low-densi 96.4 1.1 3.6E-05 46.0 28.2 197 287-492 438-639 (791)
312 3kya_A Putative phosphatase; s 96.4 0.15 5.3E-06 48.6 16.8 70 414-484 187-277 (496)
313 2xbg_A YCF48-like protein; pho 96.3 0.6 2.1E-05 42.2 28.3 104 414-535 206-316 (327)
314 1xi4_A Clathrin heavy chain; a 96.1 0.15 5.3E-06 54.5 16.2 225 23-309 45-294 (1630)
315 3pbp_A Nucleoporin NUP82; beta 95.9 0.13 4.5E-06 47.4 13.2 141 15-169 31-198 (452)
316 2be1_A Serine/threonine-protei 95.9 0.97 3.3E-05 40.8 20.6 104 286-394 11-140 (339)
317 2vpj_A Kelch-like protein 12; 95.8 0.92 3.1E-05 40.3 19.4 176 286-487 64-280 (301)
318 3a9g_A Putative uncharacterize 95.7 0.32 1.1E-05 44.6 15.2 28 321-349 29-56 (354)
319 2ism_A Putative oxidoreductase 95.7 1.2 4.1E-05 40.7 22.8 61 288-350 44-113 (352)
320 3ott_A Two-component system se 95.7 2.2 7.7E-05 43.8 38.7 180 288-488 386-589 (758)
321 3ii7_A Kelch-like protein 7; p 95.7 1.1 3.7E-05 40.0 19.8 176 286-487 57-274 (306)
322 2xn4_A Kelch-like protein 2; s 95.7 0.96 3.3E-05 40.2 18.2 176 286-487 63-278 (302)
323 2woz_A Kelch repeat and BTB do 95.6 1.2 4.1E-05 39.9 19.3 64 422-487 157-233 (318)
324 1zgk_A Kelch-like ECH-associat 95.6 1.1 3.6E-05 40.1 18.0 64 423-488 168-243 (308)
325 2ism_A Putative oxidoreductase 95.4 0.31 1.1E-05 44.7 13.9 102 414-529 32-153 (352)
326 1xi4_A Clathrin heavy chain; a 95.3 0.49 1.7E-05 50.9 16.3 236 236-486 73-332 (1630)
327 3das_A Putative oxidoreductase 95.3 0.22 7.5E-06 45.2 12.1 107 414-530 33-159 (347)
328 2xbg_A YCF48-like protein; pho 95.2 1.7 5.7E-05 39.3 25.1 103 414-534 164-272 (327)
329 1cru_A Protein (soluble quinop 95.0 1.8 6.2E-05 41.1 18.3 29 322-350 28-56 (454)
330 3a9g_A Putative uncharacterize 95.0 2.1 7.1E-05 39.1 25.4 61 455-529 259-330 (354)
331 2uvk_A YJHT; unknown function, 95.0 1.1 3.6E-05 41.1 16.3 61 287-350 22-94 (357)
332 1zgk_A Kelch-like ECH-associat 94.9 1.9 6.6E-05 38.4 18.8 167 295-487 90-289 (308)
333 1tl2_A L10, protein (tachylect 94.7 0.11 3.8E-06 43.1 7.6 101 414-534 42-156 (236)
334 1tl2_A L10, protein (tachylect 94.6 1.1 3.9E-05 37.2 13.3 63 416-482 91-160 (236)
335 3s25_A Hypothetical 7-bladed b 94.6 0.8 2.7E-05 40.7 13.8 68 418-490 109-181 (302)
336 2uvk_A YJHT; unknown function, 94.0 2.8 9.7E-05 38.2 17.0 56 435-492 286-349 (357)
337 4asc_A Kelch repeat and BTB do 93.7 3.7 0.00013 36.6 18.9 64 423-488 196-280 (315)
338 1cru_A Protein (soluble quinop 92.9 0.76 2.6E-05 43.7 11.2 107 414-530 28-163 (454)
339 3sbq_A Nitrous-oxide reductase 92.7 0.39 1.3E-05 45.9 8.5 106 414-529 324-453 (638)
340 2be1_A Serine/threonine-protei 92.7 0.23 7.7E-06 44.9 6.7 113 16-146 10-138 (339)
341 2g8s_A Glucose/sorbosone dehyd 92.1 1.1 3.9E-05 40.9 10.9 108 414-530 19-149 (353)
342 2woz_A Kelch repeat and BTB do 91.8 6.7 0.00023 34.9 17.7 66 423-490 206-292 (318)
343 3uc1_A DNA gyrase subunit A; D 90.5 5.8 0.0002 35.6 13.5 103 15-127 108-228 (327)
344 2wg3_C Hedgehog-interacting pr 86.5 7.4 0.00025 36.9 12.0 52 414-465 15-79 (463)
345 3s25_A Hypothetical 7-bladed b 86.1 17 0.0006 32.0 21.2 155 295-485 88-255 (302)
346 4gq2_M Nucleoporin NUP120; bet 82.4 25 0.00085 37.0 14.9 38 414-451 237-274 (950)
347 3qhy_B Beta-lactamase inhibito 80.9 28 0.00094 30.3 17.5 158 294-485 41-207 (282)
348 2zwa_A Leucine carboxyl methyl 80.3 52 0.0018 33.1 20.4 191 286-489 399-639 (695)
349 3sbq_A Nitrous-oxide reductase 79.8 16 0.00054 35.3 10.8 91 28-127 300-408 (638)
350 2wg3_C Hedgehog-interacting pr 78.7 33 0.0011 32.5 13.1 29 322-350 15-44 (463)
351 3no0_A DNA gyrase subunit A; D 78.7 27 0.00093 30.3 11.6 103 15-127 79-196 (276)
352 2g8s_A Glucose/sorbosone dehyd 77.1 42 0.0014 30.3 23.1 66 455-534 271-347 (353)
353 4gq2_M Nucleoporin NUP120; bet 76.4 5.6 0.00019 41.9 7.7 37 5-43 238-274 (950)
354 3q6k_A 43.2 kDa salivary prote 75.9 48 0.0016 30.3 21.2 70 414-485 221-306 (381)
355 1suu_A DNA gyrase subunit A; t 73.7 48 0.0016 29.3 19.3 62 423-485 113-181 (312)
356 1wp5_A Topoisomerase IV; broke 70.3 59 0.002 28.9 18.6 60 424-484 106-173 (323)
357 3das_A Putative oxidoreductase 69.5 64 0.0022 29.0 27.6 64 287-350 45-115 (347)
358 3zwu_A Alkaline phosphatase PH 67.8 20 0.00069 35.1 8.8 59 414-472 477-548 (592)
359 1zi0_A DNA gyrase subunit A; b 67.6 65 0.0022 28.4 18.0 193 330-535 1-220 (307)
360 4fhn_B Nucleoporin NUP120; pro 67.6 21 0.00072 38.5 9.8 38 456-493 239-276 (1139)
361 3l6v_A GYRA, DNA gyrase subuni 67.1 75 0.0026 28.9 18.5 196 326-535 1-259 (370)
362 2zwa_A Leucine carboxyl methyl 65.1 71 0.0024 32.2 12.6 66 422-487 499-579 (695)
363 3f7f_A Nucleoporin NUP120; nuc 63.7 27 0.00092 34.9 8.8 30 15-44 230-259 (729)
364 4fhn_B Nucleoporin NUP120; pro 62.6 7.2 0.00025 42.1 5.1 37 5-43 240-276 (1139)
365 3q6k_A 43.2 kDa salivary prote 62.5 42 0.0014 30.7 9.3 96 27-127 124-253 (381)
366 4a9v_A PHOX; hydrolase, beta-p 62.5 36 0.0012 33.0 9.2 60 414-473 477-549 (592)
367 4a9v_A PHOX; hydrolase, beta-p 62.1 29 0.00098 33.7 8.4 60 456-529 477-549 (592)
368 3zwu_A Alkaline phosphatase PH 60.3 23 0.00078 34.7 7.6 58 457-528 478-548 (592)
369 3qhy_B Beta-lactamase inhibito 51.2 1.2E+02 0.0041 26.2 15.5 158 294-485 80-246 (282)
370 3f7f_A Nucleoporin NUP120; nuc 49.9 22 0.00075 35.6 5.6 36 457-494 224-259 (729)
371 3no0_A DNA gyrase subunit A; D 45.7 1.5E+02 0.005 25.6 22.2 108 364-484 79-195 (276)
372 3uc1_A DNA gyrase subunit A; D 40.6 2E+02 0.0067 25.6 24.5 186 286-484 4-227 (327)
373 3b7f_A Glycosyl hydrolase, BNR 35.4 2.5E+02 0.0087 25.4 10.8 26 98-123 116-143 (394)
374 1zvt_A Topoisomerase IV subuni 34.0 2.2E+02 0.0074 24.2 10.2 61 67-127 95-163 (256)
375 1suu_A DNA gyrase subunit A; t 33.6 2.5E+02 0.0084 24.7 27.3 187 286-485 9-231 (312)
376 3b7f_A Glycosyl hydrolase, BNR 25.6 3.7E+02 0.013 24.2 14.0 26 456-481 116-143 (394)
377 3mvd_K Regulator of chromosome 22.7 4.5E+02 0.015 24.1 23.8 59 322-382 76-153 (423)
378 1q47_A Semaphorin 3A; beta pro 21.7 2.8E+02 0.0095 26.4 7.9 56 425-480 422-487 (495)
379 1q47_A Semaphorin 3A; beta pro 21.1 2.5E+02 0.0086 26.7 7.5 61 286-346 422-487 (495)
No 1
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-58 Score=468.10 Aligned_cols=447 Identities=22% Similarity=0.292 Sum_probs=369.9
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
..|+|++|+ |||++|++++.|+.|+|||. ++++++.+. +..++.++ .++| ++++|++++.|+.|++
T Consensus 17 ~~V~~~a~s--pdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l--~fsp--------dg~~las~~~d~~i~v 83 (577)
T 2ymu_A 17 SSVRGVAFS--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV--AFSP--------DGQTIASASDDKTVKL 83 (577)
T ss_dssp SCEEEEEEC--TTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEE--EECT--------TSSEEEEEETTSCEEE
T ss_pred CcEEEEEEC--CCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEE--EECC--------CCCEEEEEeCCCEEEE
Confidence 369999999 89999999999999999994 778888777 56677777 5688 6789999999999999
Q ss_pred eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcc----------------------------
Q psy10942 82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLE---------------------------- 132 (537)
Q Consensus 82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~---------------------------- 132 (537)
||. +++.+..+..+ +.|.+++|+|++++|++++.|+.+++|+........
T Consensus 84 Wd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 162 (577)
T 2ymu_A 84 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 162 (577)
T ss_dssp EET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccc
Confidence 996 56667777655 588888888888888888888888777743210000
Q ss_pred -------------------------ccc-----------------ccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942 133 -------------------------ERP-----------------NKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN 170 (537)
Q Consensus 133 -------------------------~~~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 170 (537)
..+ ....+....+.+|...|.+++|+ +++..|++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~~ 241 (577)
T 2ymu_A 163 VKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFS-PDGQTIASASD 241 (577)
T ss_dssp EEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEEC-TTSSCEEEEET
T ss_pred eeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEEC-CCCCEEEEEeC
Confidence 000 01134566778899999999999 78888888887
Q ss_pred ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942 171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME 249 (537)
Q Consensus 171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d 249 (537)
++. + ++||. ...... +. +| ...|.++ +|+|+++.+++++.|
T Consensus 242 d~~----i-----------------~~w~~-------~~~~~~~~~-----~~--~~~v~~v---~~~~d~~~l~~~~~d 283 (577)
T 2ymu_A 242 DKT----V-----------------KLWNR-------NGQLLQTLT-----GH--SSSVNGV---AFRPDGQTIASASDD 283 (577)
T ss_dssp TSC----E-----------------EEECT-------TSCEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETT
T ss_pred CCE----E-----------------EEEeC-------CCCEEEEEe-----cC--CCCEEEE---EEcCCCCEEEEEeCC
Confidence 776 9 99987 543333 66 89 9999999 999999999999999
Q ss_pred CcceeccccccCCCcccccccccccceeeeeeC--C------cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942 250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--G------TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK 321 (537)
Q Consensus 250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~------~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 321 (537)
+.++ +|+..... ...+.+|.. . .-..+++++.|+.|++||..... ...+..|..
T Consensus 284 ~~i~--~w~~~~~~----------~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~------~~~~~~~~~ 345 (577)
T 2ymu_A 284 KTVK--LWNRNGQL----------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH------LQTLTGHSS 345 (577)
T ss_dssp SCEE--EEETTSCE----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE------EEEECCCSS
T ss_pred CEEE--EEeCCCcE----------EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe------eEEEeCCCC
Confidence 9999 99976521 222233322 1 11589999999999999987654 334568899
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEccCC--------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942 322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGG--------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 393 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 393 (537)
.|.+++|+|++++|++++.|+.+++||.... ...+..+...+++.++++++.|+.|++||. +++.+..+..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~ 424 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 424 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC
Confidence 9999999999999999999999999997521 122344455667899999999999999995 5778888999
Q ss_pred CCcceEEEEEecCCCceEEe------------------------eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE
Q psy10942 394 HALKIWTLAITKDENQIITG------------------------GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS 449 (537)
Q Consensus 394 ~~~~i~~~~~~~~~~~~~~~------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 449 (537)
|...+.+++++|+++.++++ .+.+++|+|++++|++++.|+.|++||. +++++..
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~ 503 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 503 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEE
Confidence 99999999999999988764 4889999999999999999999999995 6788999
Q ss_pred eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 450 LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 450 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
+.+|...|++++|+|++++|++++.||.|++||. +++++..+.+|...| +++ +|+|||++|+|++
T Consensus 504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v-----------~~~---~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-----------WGV---AFSPDGQTIASAS 568 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE-----------EEE---EECTTSSCEEEEE
T ss_pred EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCE-----------EEE---EEcCCCCEEEEEe
Confidence 9999999999999999999999999999999996 788999999999999 999 9999999999999
Q ss_pred CCCCEEeC
Q psy10942 530 WSPQVVVY 537 (537)
Q Consensus 530 ~dg~i~vW 537 (537)
.|++|++|
T Consensus 569 ~D~~i~~W 576 (577)
T 2ymu_A 569 SDKTVKLW 576 (577)
T ss_dssp TTSCEEEE
T ss_pred CCCEEEEe
Confidence 99999999
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.3e-58 Score=464.09 Aligned_cols=449 Identities=11% Similarity=0.116 Sum_probs=354.8
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccce--eeeec-cccccceeeeEeecCccccccCCcEEEEEeCcc---
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQ--LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEK--- 76 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 76 (537)
..|++++|+ ||+++|++|+.||+|+|||+.+++. ...++ +..++..+ .+.| +++++++++.+
T Consensus 60 ~~v~~~~~s--pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v--~fs~--------dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 60 HQTTVAKTS--PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI--SWDS--------ESKRIAAVGEGRER 127 (611)
T ss_dssp SCEEEEEEC--TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEE--EECT--------TSCEEEEEECCSSC
T ss_pred CceEEEEEC--CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEE--EECC--------CCCEEEEEECCCCc
Confidence 469999999 8999999999999999999976543 33444 55677777 5688 55677776654
Q ss_pred -ceEEeeeccceehhhhcCCC-cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhh
Q psy10942 77 -SLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEIL 153 (537)
Q Consensus 77 -~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 153 (537)
+.|++|| .++.+..+..| +.|.+++|+|++. .|++++.|++|++||..+ .++...+.+|...|.
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-----------~~~~~~l~~H~~~V~ 194 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----------FKFKSTFGEHTKFVH 194 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----------BEEEEEECCCSSCEE
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-----------CeEeeeeccccCceE
Confidence 5788888 45666667665 6999999999997 599999999999999887 678889999999999
Q ss_pred hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc--cccccCCCcCeEE
Q psy10942 154 DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN--TERLGRDELKTVT 229 (537)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~--~~~~~h~~~~~v~ 229 (537)
+++|+ |++++|++++.++. | ++||. .++++. +.. ....+| ...|.
T Consensus 195 ~v~fs-pdg~~las~s~D~~----i-----------------~lwd~-------~~g~~~~~~~~~~~~~~~h--~~~V~ 243 (611)
T 1nr0_A 195 SVRYN-PDGSLFASTGGDGT----I-----------------VLYNG-------VDGTKTGVFEDDSLKNVAH--SGSVF 243 (611)
T ss_dssp EEEEC-TTSSEEEEEETTSC----E-----------------EEEET-------TTCCEEEECBCTTSSSCSS--SSCEE
T ss_pred EEEEC-CCCCEEEEEECCCc----E-----------------EEEEC-------CCCcEeeeecccccccccc--CCCEE
Confidence 99999 78888888888877 9 99998 666554 210 011279 99999
Q ss_pred EEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccccc--ceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942 230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEA--EHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK 307 (537)
Q Consensus 230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~ 307 (537)
++ +|+|++++|++++.|++++ +|++..+............ ....... .-..+++++.|+.+++|+...+..
T Consensus 244 ~v---~~spdg~~l~s~s~D~~v~--lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 244 GL---TWSPDGTKIASASADKTIK--IWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp EE---EECTTSSEEEEEETTSEEE--EEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEE
T ss_pred EE---EECCCCCEEEEEeCCCeEE--EEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCc
Confidence 99 9999999999999999999 9999874321111000000 0000000 115789999999999999988764
Q ss_pred eeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-----------eEEEEecCCCCEEEEEcCCCc
Q psy10942 308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-----------LNVLRGHKKGTQIVSTGADGL 376 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-----------~~~~~~~~~~~~l~~~~~d~~ 376 (537)
...+.+|...|.+++|+|++++|++++.|+.|++||+.. ... +..+...+ +..+++++.|+.
T Consensus 317 -----~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~-~~~~~~~~~~h~~~v~~~~~s~-~~~l~s~s~d~~ 389 (611)
T 1nr0_A 317 -----DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-GISNRVFPDVHATMITGIKTTS-KGDLFTVSWDDH 389 (611)
T ss_dssp -----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEECSSCSCSSCEEEEEECT-TSCEEEEETTTE
T ss_pred -----ceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-CceeeecccCCcceEEEEEECC-CCcEEEEEcCCc
Confidence 344578999999999999999999999999999999983 332 23333333 457889999999
Q ss_pred EEEEECCCCeee-----------------------------------------eeeccCCcceEEEEEecCCCceEEe--
Q psy10942 377 LKLWSIKTSTCV-----------------------------------------STFDKHALKIWTLAITKDENQIITG-- 413 (537)
Q Consensus 377 i~i~d~~~~~~~-----------------------------------------~~~~~~~~~i~~~~~~~~~~~~~~~-- 413 (537)
+++|+...+... ..+ .+...+.+++++|+++.++++
T Consensus 390 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~ 468 (611)
T 1nr0_A 390 LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQ 468 (611)
T ss_dssp EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEET
T ss_pred eEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCC
Confidence 999997654211 011 134567889999999888764
Q ss_pred ------------------------eeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeE--eecCCcceEEEEEecCC
Q psy10942 414 ------------------------GVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKS--LEGHDASVLRCHFINKG 466 (537)
Q Consensus 414 ------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~--~~~~~~~v~~~~~s~~~ 466 (537)
.|.+++|+||+++|++++.|+.|++||+.+ ++.+.. +.+|...|.+++|+||+
T Consensus 469 D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg 548 (611)
T 1nr0_A 469 DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN 548 (611)
T ss_dssp TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS
T ss_pred CCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCC
Confidence 378899999999999999999999999987 666554 34599999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCe-eE-EEecCC-ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 467 TQIVSTGADGLLKLWSIKTST-CV-STFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 467 ~~l~s~~~dg~v~vwd~~~~~-~~-~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
++||+++.|++|++||+.+++ .. ..+.+| ...| .++ +|+|+++ |++++.|++|++|
T Consensus 549 ~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v-----------~~v---~fs~d~~-l~s~~~D~~i~lW 607 (611)
T 1nr0_A 549 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSV-----------NSV---IWLNETT-IVSAGQDSNIKFW 607 (611)
T ss_dssp SEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCE-----------EEE---EEEETTE-EEEEETTSCEEEE
T ss_pred CEEEEEECCCcEEEEECCCcccccchhhccCcccCe-----------eEE---EEcCCCE-EEEecCCCCEEEE
Confidence 999999999999999998765 33 667789 7889 899 9999998 9999999999999
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-55 Score=443.97 Aligned_cols=445 Identities=16% Similarity=0.165 Sum_probs=347.6
Q ss_pred eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
.+.+++|+ |||++|++++ ++.|++||+++++....+. +...+.++ .++| +++++++++.|+.|++|
T Consensus 20 ~~~~~~~s--pdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~--~~sp--------dg~~lasg~~d~~v~lW 86 (611)
T 1nr0_A 20 TAVVLGNT--PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVA--KTSP--------SGYYCASGDVHGNVRIW 86 (611)
T ss_dssp CCCCCEEC--TTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEE--EECT--------TSSEEEEEETTSEEEEE
T ss_pred ceeEEeeC--CCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEE--EECC--------CCcEEEEEeCCCCEEEe
Confidence 46788999 8999999987 4689999999988888776 56677777 5688 77999999999999999
Q ss_pred eccceeh--hhhcC-CCcceEEEEEeccccEEEEEeCC----ceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942 83 ETSAVKE--LYQHG-LSSPLVRIVRSSVKRMYAVVTAD----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI 155 (537)
Q Consensus 83 d~~~~~~--~~~~~-~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 155 (537)
|+.+++. ...+. +.+.|.+++|+||+++||+++.+ +.|++||. ......+.+|...|.++
T Consensus 87 d~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-------------~~~~~~l~gh~~~v~~v 153 (611)
T 1nr0_A 87 DTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-------------GTSNGNLTGQARAMNSV 153 (611)
T ss_dssp ESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-------------CCBCBCCCCCSSCEEEE
T ss_pred ECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-------------CCCcceecCCCCCceEE
Confidence 9975543 33444 34699999999999999998865 47888873 23456788999999999
Q ss_pred hcccCCCc-cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEe
Q psy10942 156 ALLGEEDS-HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLE 232 (537)
Q Consensus 156 ~~~~~~~~-~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~ 232 (537)
+|+ |++. .|++++.++. + ++||. .+.++. +. +| ...|.++
T Consensus 154 ~f~-p~~~~~l~s~s~D~~----v-----------------~lwd~-------~~~~~~~~l~-----~H--~~~V~~v- 196 (611)
T 1nr0_A 154 DFK-PSRPFRIISGSDDNT----V-----------------AIFEG-------PPFKFKSTFG-----EH--TKFVHSV- 196 (611)
T ss_dssp EEC-SSSSCEEEEEETTSC----E-----------------EEEET-------TTBEEEEEEC-----CC--SSCEEEE-
T ss_pred EEC-CCCCeEEEEEeCCCe----E-----------------EEEEC-------CCCeEeeeec-----cc--cCceEEE-
Confidence 999 5554 5788887777 9 99998 766655 67 99 9999999
Q ss_pred ccCcccCCCeeeeccCCCcceeccccccCCCcccccc--------cccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942 233 RGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI--------FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG 304 (537)
Q Consensus 233 ~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~ 304 (537)
+|+|+|++|++++.|+.|+ +|+...+....... ....+..+..++.. .+|++++.|++|++||+.+
T Consensus 197 --~fspdg~~las~s~D~~i~--lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg--~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 197 --RYNPDGSLFASTGGDGTIV--LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG--TKIASASADKTIKIWNVAT 270 (611)
T ss_dssp --EECTTSSEEEEEETTSCEE--EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS--SEEEEEETTSEEEEEETTT
T ss_pred --EECCCCCEEEEEECCCcEE--EEECCCCcEeeeeccccccccccCCCEEEEEECCCC--CEEEEEeCCCeEEEEeCCC
Confidence 9999999999999999999 99987753211110 00111112222211 6899999999999999998
Q ss_pred CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------eEEEEecCCCCEEEEEcCC
Q psy10942 305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL----------LNVLRGHKKGTQIVSTGAD 374 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~l~~~~~d 374 (537)
++....+.. ...+...+..+.| +++.+++++.|+.+++||.. .... +..+..++++.++++++.|
T Consensus 271 ~~~~~~~~~--~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~-~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 271 LKVEKTIPV--GTRIEDQQLGIIW--TKQALVSISANGFINFVNPE-LGSIDQVRYGHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp TEEEEEEEC--CSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CceeeeecC--CCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCC-CCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 876543311 1223445666777 67889999999999999987 3333 4445556789999999999
Q ss_pred CcEEEEECCCCeeeeee-ccCCcceEEEEEec--------------------------------------------CCCc
Q psy10942 375 GLLKLWSIKTSTCVSTF-DKHALKIWTLAITK--------------------------------------------DENQ 409 (537)
Q Consensus 375 ~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~--------------------------------------------~~~~ 409 (537)
++|++||+.+++....+ ..|...+.++.+++ ++..
T Consensus 346 ~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 425 (611)
T 1nr0_A 346 GHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI 425 (611)
T ss_dssp SCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSC
T ss_pred CcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcE
Confidence 99999999998876655 45666666655544 3322
Q ss_pred eEE--------------------eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEeecCCcceEEEEEecCCC
Q psy10942 410 IIT--------------------GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGT 467 (537)
Q Consensus 410 ~~~--------------------~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~ 467 (537)
++. ..+.+++|+||+++|++|+.|+.|++||+.+++. +.. .+|...|++++|+|+++
T Consensus 426 ~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~ 504 (611)
T 1nr0_A 426 AVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGA 504 (611)
T ss_dssp EEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSS
T ss_pred EEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCC
Confidence 211 1357899999999999999999999999987643 334 67999999999999999
Q ss_pred EEEEEeCCCcEEEEECCC-CeeEEE--ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 468 QIVSTGADGLLKLWSIKT-STCVST--FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 468 ~l~s~~~dg~v~vwd~~~-~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+|++++.|++|++|++.+ ++++.. +.+|...| .++ +|+|||++|++++.|++|+||
T Consensus 505 ~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V-----------~~v---~fspdg~~lasgs~D~~v~lW 563 (611)
T 1nr0_A 505 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKV-----------ACV---SWSPDNVRLATGSLDNSVIVW 563 (611)
T ss_dssp EEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCE-----------EEE---EECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEcCCCCEEEEEcCCCCceeeeeeeeecccce-----------eEE---EECCCCCEEEEEECCCcEEEE
Confidence 999999999999999987 666543 34499999 999 999999999999999999999
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.7e-52 Score=418.02 Aligned_cols=430 Identities=23% Similarity=0.308 Sum_probs=340.9
Q ss_pred eeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942 40 RSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTAD 117 (537)
Q Consensus 40 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d 117 (537)
+.+. |..+|.++ .++| ++++|++++.|+.|++||. +++++.++..| +.|.+++|+||+++||+++.|
T Consensus 10 ~~L~GH~~~V~~~--a~sp--------dg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d 78 (577)
T 2ymu_A 10 NRLEAHSSSVRGV--AFSP--------DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD 78 (577)
T ss_dssp EEECCCSSCEEEE--EECT--------TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEECCCCCcEEEE--EECC--------CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCC
Confidence 3454 67788888 5688 7789999999999999995 67888888866 699999999999999999999
Q ss_pred ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc----------------CCcc---
Q psy10942 118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN----------------GGDL--- 178 (537)
Q Consensus 118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~----------------~~~i--- 178 (537)
++|+|||... +.+..+.+|...|.+++|+ |++++|++++.++.. ...+
T Consensus 79 ~~i~vWd~~~------------~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (577)
T 2ymu_A 79 KTVKLWNRNG------------QLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 145 (577)
T ss_dssp SCEEEEETTS------------CEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEE
T ss_pred CEEEEEECCC------------CEEEEEECCCCCEEEEEEC-CCCCEEEEEcCCCceeecccccceeeeccCCCCceeee
Confidence 9999999644 6778899999999999999 788888877655430 0000
Q ss_pred --------------cceeeccc---------------------CCC-------cchhhHHHHHHHHHhhhccccccc-cc
Q psy10942 179 --------------SGLVKLGA---------------------NRS-------HNEWFDKTFERILEAKFKQSSSQQ-KH 215 (537)
Q Consensus 179 --------------~~~~~~~~---------------------~~~-------~~~~~~~~wd~~~~~~~~~~~~~~-l~ 215 (537)
.+.+.++. .+. ..+...++||. ...... +.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-------~~~~~~~~~ 218 (577)
T 2ymu_A 146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-------NGQLLQTLT 218 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-------TSCEEEEEE
T ss_pred eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-------CCcEEEEEe
Confidence 00000000 000 00111255654 332222 55
Q ss_pred ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942 216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK 295 (537)
Q Consensus 216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~ 295 (537)
+| ...|.++ +|+|++++|++++.|+.++ +|+...............+..+...... ..+++++.|+
T Consensus 219 -----~~--~~~v~~~---~~s~dg~~l~~~~~d~~i~--~w~~~~~~~~~~~~~~~~v~~v~~~~d~--~~l~~~~~d~ 284 (577)
T 2ymu_A 219 -----GH--SSSVRGV---AFSPDGQTIASASDDKTVK--LWNRNGQLLQTLTGHSSSVNGVAFRPDG--QTIASASDDK 284 (577)
T ss_dssp -----CC--SSCEEEE---EECTTSSCEEEEETTSCEE--EECTTSCEEEEECCCSSCEEEEEECTTS--SEEEEEETTS
T ss_pred -----cC--CCCEEEE---EECCCCCEEEEEeCCCEEE--EEeCCCCEEEEEecCCCCEEEEEEcCCC--CEEEEEeCCC
Confidence 89 9999999 9999999999999999999 9997542110000001111112221111 5899999999
Q ss_pred eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC--------ceeeEEEEecCCCCE
Q psy10942 296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG--------LKLLNVLRGHKKGTQ 367 (537)
Q Consensus 296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~ 367 (537)
.|++|+..... ...+.+|...|.+++|+|+++.|++++.|+.|++||+... ...+..+...+++..
T Consensus 285 ~i~~w~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 358 (577)
T 2ymu_A 285 TVKLWNRNGQL------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQT 358 (577)
T ss_dssp CEEEEETTSCE------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEEeCCCcE------EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCE
Confidence 99999976543 3456789999999999999999999999999999998732 122345566778999
Q ss_pred EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe------------------------eeeEEEEcCC
Q psy10942 368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG------------------------GVWFVNFSPL 423 (537)
Q Consensus 368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------------~i~~~~~s~~ 423 (537)
+++++.|+.+++||. +++.+..+..|...+.+++++|+++.++++ .+.+++|+|+
T Consensus 359 l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d 437 (577)
T 2ymu_A 359 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD 437 (577)
T ss_dssp EEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCC
Confidence 999999999999995 677888899999999999999999988864 4889999999
Q ss_pred CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccC
Q psy10942 424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSD 503 (537)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~ 503 (537)
+++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++||. +++++..+.+|...|
T Consensus 438 ~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v---- 511 (577)
T 2ymu_A 438 DQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV---- 511 (577)
T ss_dssp SSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE----
T ss_pred CCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE----
Confidence 999999999999999996 56788899999999999999999999999999999999995 788999999999999
Q ss_pred CCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 504 SENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 504 ~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+++ +|+||+++|++++.||.|+||
T Consensus 512 -------~~l---~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 512 -------RGV---AFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp -------EEE---EECTTSSCEEEEETTSEEEEE
T ss_pred -------EEE---EEcCCCCEEEEEECcCEEEEE
Confidence 999 999999999999999999998
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-52 Score=459.63 Aligned_cols=459 Identities=18% Similarity=0.231 Sum_probs=372.3
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
..|++++|+ +++++|++++.||.|++||+.+++.+..+. +...+..+ .+.|.. +..++++++.|+.|++
T Consensus 658 ~~v~~~~~s--~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~--~~~~~~------~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 658 DEVLCCAFS--SDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCC--HFTNKS------NHLLLATGSNDFFLKL 727 (1249)
T ss_dssp SCEEEEEEC--TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE--EECSSS------SCCEEEEEETTSCEEE
T ss_pred CCEEEEEEe--cCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEE--EEecCC------CceEEEEEeCCCeEEE
Confidence 468999999 899999999999999999999999999886 55567777 556642 5568999999999999
Q ss_pred eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCccccc-------------------------
Q psy10942 82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERP------------------------- 135 (537)
Q Consensus 82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~------------------------- 135 (537)
||+.+++.+..+..| +.|.+++|+|++++|++++.|+.|++||+.++.......
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 999999988888765 699999999999999999999999999998742110000
Q ss_pred ------------------ccccceeEE-eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHH
Q psy10942 136 ------------------NKILKFRKQ-FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK 196 (537)
Q Consensus 136 ------------------~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (537)
......... ..+|...+.+++|+ +++..+++++.++. + +
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~~~~dg~----v-----------------~ 865 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS-PYDHLAVIALSQYC----V-----------------E 865 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC-SSTTEEEEECSSSC----E-----------------E
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc-CCCCEEEEEeCCCe----E-----------------E
Confidence 000011111 12566777778887 66677777666655 7 9
Q ss_pred HHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc---
Q psy10942 197 TFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--- 271 (537)
Q Consensus 197 ~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--- 271 (537)
+||. .++... +. +| ...|.++ +|+|+++++++++.|+.++ +|++............
T Consensus 866 vwd~-------~~~~~~~~~~-----~h--~~~v~~v---~~spdg~~l~s~s~dg~v~--vw~~~~~~~~~~~~~~~~~ 926 (1249)
T 3sfz_A 866 LWNI-------DSRLKVADCR-----GH--LSWVHGV---MFSPDGSSFLTASDDQTIR--VWETKKVCKNSAIVLKQEI 926 (1249)
T ss_dssp EEET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEEHHHHHSCCSSSEEEEE
T ss_pred EEEc-------CCCceeeecC-----CC--ccceEEE---EECCCCCEEEEEeCCCeEE--EEEccccceeeeeccccee
Confidence 9999 776666 66 99 9999999 9999999999999999999 9997642110000000
Q ss_pred -----------------------------------cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942 272 -----------------------------------PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK 316 (537)
Q Consensus 272 -----------------------------------~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 316 (537)
.....+... ..-..+++|+.+|.|++|++.++.. ...+
T Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--p~g~~l~~g~~~g~i~i~d~~~~~~-----~~~~ 999 (1249)
T 3sfz_A 927 DVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLS--PHLEYVAFGDEDGAIKIIELPNNRV-----FSSG 999 (1249)
T ss_dssp EEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEEC--TTSSEEEEEETTSCCEEEETTTTSC-----EEEC
T ss_pred eEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEc--CCCCEEEEEcCCCCEEEEEcCCCce-----eeec
Confidence 000000000 1116899999999999999998875 3445
Q ss_pred cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee---------eEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL---------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC 387 (537)
Q Consensus 317 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~---------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 387 (537)
.+|...|.+++|+|++++|++++.||.|++||+.. ... +..+...+ +..+++++.|+.+++||+.+++.
T Consensus 1000 ~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1000 VGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT-GDYVFLQAHQETVKDFRLLQ-DSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT-TEEECCBCCSSCEEEEEECS-SSEEEEEESSSEEEEEETTTTCC
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CceEEEecCCCcEEEEEEcC-CCcEEEEECCCcEEEEECCCCce
Confidence 68999999999999999999999999999999983 332 33344444 55788999999999999999999
Q ss_pred eeeeccCCcceEEEEEecCCCceEEe-------------------------eeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942 388 VSTFDKHALKIWTLAITKDENQIITG-------------------------GVWFVNFSPLDRILISSSGDATIKLWCLT 442 (537)
Q Consensus 388 ~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (537)
...+..|...+.+++++|++..++++ .|.+++|+|++++|++++.||.|++||+.
T Consensus 1078 ~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157 (1249)
T ss_dssp CEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESS
T ss_pred eEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 99999999999999999999988865 48999999999999999999999999999
Q ss_pred CceeeeEe---------ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942 443 DYVCLKSL---------EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL 513 (537)
Q Consensus 443 ~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 513 (537)
+++.+..+ .+|.+.|++++|+|++++|++++ |.|++||+.+++.+..+..|...+ .++
T Consensus 1158 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i-----------~~~ 1224 (1249)
T 3sfz_A 1158 DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNL-----------KKI 1224 (1249)
T ss_dssp SSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCC-----------CCC
T ss_pred CCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcc-----------cEE
Confidence 98877765 67889999999999999999885 899999999999999999999889 899
Q ss_pred cceeeecCCCEEEEEeCCCCEEeC
Q psy10942 514 PRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 514 ~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+|+||+++|++++.||.|++|
T Consensus 1225 ---~~s~dg~~l~~~~~dg~v~vw 1245 (1249)
T 3sfz_A 1225 ---HVSPDFRTYVTVDNLGILYIL 1245 (1249)
T ss_dssp ---EECSSSCCEEEECTTCCEEEE
T ss_pred ---EECCCCCEEEEecCCcEEEEE
Confidence 999999999999999999998
No 6
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.8e-52 Score=454.15 Aligned_cols=453 Identities=16% Similarity=0.167 Sum_probs=384.0
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
..|+|++|+ +++++|++|+.||+|++||+.+++.+..+. +...+.++ .++| ++.++++++.|+.|++
T Consensus 616 ~~v~~~~~s--~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~--~~s~--------~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 616 DAVYHACFS--QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCC--AFSS--------DDSYIATCSADKKVKI 683 (1249)
T ss_dssp SCEEEEEEC--TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE--EECT--------TSSEEEEEETTSEEEE
T ss_pred ccEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEE--EEec--------CCCEEEEEeCCCeEEE
Confidence 479999999 899999999999999999999999999887 56677777 5688 6689999999999999
Q ss_pred eeccceehhhhcCCC-cceEEEEEec--cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942 82 YETSAVKELYQHGLS-SPLVRIVRSS--VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL 158 (537)
Q Consensus 82 wd~~~~~~~~~~~~~-~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (537)
||+.+++.+..+..| +.|.+++|+| ++.++++++.|+.|++||+.+ .+....+.+|.+.|.+++|+
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----------~~~~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-----------KECRNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----------SSEEEEECCCSSCEEEEEEC
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----------cchhheecCCCCCEEEEEEe
Confidence 999999998888755 6999999999 556899999999999999999 68888999999999999999
Q ss_pred cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc--------ccccCCCcCeE
Q psy10942 159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT--------ERLGRDELKTV 228 (537)
Q Consensus 159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~--------~~~~h~~~~~v 228 (537)
++++.+++++.++. | ++||+ .++... +... ....+ ...+
T Consensus 753 -p~~~~l~s~s~dg~----v-----------------~vwd~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v 801 (1249)
T 3sfz_A 753 -PDDELLASCSADGT----L-----------------RLWDV-------RSANERKSINVKRFFLSSEDPPEDV--EVIV 801 (1249)
T ss_dssp -SSTTEEEEEESSSE----E-----------------EEEEG-------GGTEEEEEEECCCCC--------CC--CCCB
T ss_pred -cCCCEEEEEECCCe----E-----------------EEEeC-------CCCcccceecccccccccCCccccc--cceE
Confidence 78888888888777 9 99998 655443 1100 00122 3478
Q ss_pred EEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc--cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942 229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI--FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL 306 (537)
Q Consensus 229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~ 306 (537)
.++ +|+|+|+.+++++ ++.+. +|+...+....... ....+..+..+... ..+++++.|+.|++|++.++.
T Consensus 802 ~~~---~~s~dg~~l~~~~-~~~v~--~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 802 KCC---SWSADGDKIIVAA-KNKVL--LFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--HLAVIALSQYCVELWNIDSRL 873 (1249)
T ss_dssp CCC---CBCTTSSEEEEEE-TTEEE--EEETTTCCEEEEEECSSSSCCCEEEECSST--TEEEEECSSSCEEEEETTTTE
T ss_pred EEE---EECCCCCEEEEEc-CCcEE--EEEecCCCceeEEcCCCCCceEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCc
Confidence 889 9999999999887 67899 99998754221110 00111222222222 689999999999999999887
Q ss_pred eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC----------------------------------
Q psy10942 307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG---------------------------------- 352 (537)
Q Consensus 307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~---------------------------------- 352 (537)
. ...+.+|...|.+++|+|+++.|++++.|+.|++|++...
T Consensus 874 ~-----~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1249)
T 3sfz_A 874 K-----VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQL 948 (1249)
T ss_dssp E-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEE
T ss_pred e-----eeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEE
Confidence 6 3445789999999999999999999999999999997520
Q ss_pred ------------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe-------
Q psy10942 353 ------------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG------- 413 (537)
Q Consensus 353 ------------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------- 413 (537)
...+..+..++++.++++++.+|.|++||+.+++....+..|...|.+++++|++..++++
T Consensus 949 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~ 1028 (1249)
T 3sfz_A 949 IAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQ 1028 (1249)
T ss_dssp EEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEE
T ss_pred EecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 1124455667789999999999999999999999999999999999999999999998875
Q ss_pred -----------------eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942 414 -----------------GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG 476 (537)
Q Consensus 414 -----------------~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 476 (537)
.+.+++|+|++ .+++++.|+.|++||+.+++....+.+|.+.|.+++|+|++++|++++.|+
T Consensus 1029 vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A 1029 VWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp EEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS
T ss_pred EEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC
Confidence 37889999966 567888999999999999999999999999999999999999999999999
Q ss_pred cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 477 LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 477 ~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.|++||+.+++++..+.+|...| +++ +|+|||++|++++.||.|++|
T Consensus 1108 ~v~iwd~~~~~~~~~l~~h~~~v-----------~~~---~~s~dg~~lat~~~dg~i~vw 1154 (1249)
T 3sfz_A 1108 TAKIWSFDLLSPLHELKGHNGCV-----------RCS---AFSLDGILLATGDDNGEIRIW 1154 (1249)
T ss_dssp CCCEECSSSSSCSBCCCCCSSCE-----------EEE---EECSSSSEEEEEETTSCCCEE
T ss_pred cEEEEECCCcceeeeeccCCCcE-----------EEE---EECCCCCEEEEEeCCCEEEEE
Confidence 99999999999999999999999 999 999999999999999999998
No 7
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.7e-51 Score=413.79 Aligned_cols=446 Identities=14% Similarity=0.104 Sum_probs=350.7
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCcc----ceeeeec-cccc-cceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSR----KQLRSYP-AYES-LETCAVFHLSDETESKSGGKTFVLAGGEK 76 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~----~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (537)
..|++++|+ |++++|++++ ++.|++||++++ +.+..+. +... +.++ .+.|.. +++++++++.|
T Consensus 19 ~~v~~~~~s--pdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~--~~sp~~------~~~~l~s~~~d 87 (615)
T 1pgu_A 19 NFTTHLSYD--PTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTV--KFSPIK------GSQYLCSGDES 87 (615)
T ss_dssp TCCCCCEEE--TTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEE--EECSST------TCCEEEEEETT
T ss_pred CceeEEEEC--CCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEE--EECcCC------CCCEEEEecCC
Confidence 468999999 8999999998 788999999998 7777776 5566 7777 557610 34789999999
Q ss_pred ceEEeeeccce--------ehhhhcCC-CcceEEEEEeccccEEEEEeCC----ceEEEEecccccCcccccccccceeE
Q psy10942 77 SLLHYYETSAV--------KELYQHGL-SSPLVRIVRSSVKRMYAVVTAD----HNISLYRLNSETGLEERPNKILKFRK 143 (537)
Q Consensus 77 ~~i~~wd~~~~--------~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~ 143 (537)
|.|++||+.++ +.+..+.. ...|.+++|+|++++|++++.+ +.|++|| . .+...
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~-----------~~~~~ 154 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--S-----------GNSLG 154 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--T-----------CCEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--C-----------CCcce
Confidence 99999999855 55666653 4699999999999999999987 7888888 4 45678
Q ss_pred EeecchhhhhhhhcccCCCc-cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc
Q psy10942 144 QFVGFSDEILDIALLGEEDS-HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL 220 (537)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~-~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~ 220 (537)
.+.+|...|.+++|+ +++. .+++++.++. + ++||. .+.+.. +.
T Consensus 155 ~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~----v-----------------~vwd~-------~~~~~~~~~~----- 200 (615)
T 1pgu_A 155 EVSGHSQRINACHLK-QSRPMRSMTVGDDGS----V-----------------VFYQG-------PPFKFSASDR----- 200 (615)
T ss_dssp ECCSCSSCEEEEEEC-SSSSCEEEEEETTTE----E-----------------EEEET-------TTBEEEEEEC-----
T ss_pred eeecCCccEEEEEEC-CCCCcEEEEEeCCCc----E-----------------EEEeC-------CCcceeeeec-----
Confidence 889999999999999 5555 6777777766 9 99998 777666 66
Q ss_pred cCCCcC---eEEEEeccCcccC-CCeeeeccCCCcceeccccccCCCccccc-----ccccccceeeeeeCCcceEEEEE
Q psy10942 221 GRDELK---TVTLLERGKTVKE-EDLFPRQSMEPSTLEELEKRKTYHFPLFG-----IFVPEAEHGAFYTGGTVELLASG 291 (537)
Q Consensus 221 ~h~~~~---~v~~~~~~~~s~~-~~~l~~~~~d~~i~~~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~l~~~ 291 (537)
+| .. .|.++ +|+|+ +++|++++.|+.++ +|++..+...... ....++..+... . -..++++
T Consensus 201 ~~--~~~~~~v~~~---~~~~~~~~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~--~~~l~~~ 270 (615)
T 1pgu_A 201 TH--HKQGSFVRDV---EFSPDSGEFVITVGSDRKIS--CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D--SQKFATV 270 (615)
T ss_dssp SS--SCTTCCEEEE---EECSTTCCEEEEEETTCCEE--EEETTTCCEEEECCBTTBCCCSCEEEEEES-S--SSEEEEE
T ss_pred cc--CCCCceEEEE---EECCCCCCEEEEEeCCCeEE--EEECCCCCEeEEecccccccCCceEEEEEc-C--CCEEEEE
Confidence 88 88 99999 99999 99999999999999 9999875432221 111122233333 2 2589999
Q ss_pred eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------
Q psy10942 292 SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK-------- 363 (537)
Q Consensus 292 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------- 363 (537)
+.|+.|++||+.+++....+ ......+...+.++.|+ +++++++++.|+.|++||+. ..+.+..+..|.
T Consensus 271 ~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~-~~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 271 GADATIRVWDVTTSKCVQKW-TLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELG-HDEVLKTISGHNKGITALTV 347 (615)
T ss_dssp ETTSEEEEEETTTTEEEEEE-ECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETT-EEEEEEEECCCSSCEEEEET
T ss_pred cCCCcEEEEECCCCcEEEEE-cCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECC-CCcEEEEEeCCCCCEEEEEe
Confidence 99999999999988765433 22212335778888886 89999999999999999998 455555544332
Q ss_pred ----------------------------------CCCEEEEEcCCCcEEEEECCC-------------------------
Q psy10942 364 ----------------------------------KGTQIVSTGADGLLKLWSIKT------------------------- 384 (537)
Q Consensus 364 ----------------------------------~~~~l~~~~~d~~i~i~d~~~------------------------- 384 (537)
++..+++++.|+.+++||+.+
T Consensus 348 ~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 427 (615)
T 1pgu_A 348 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD 427 (615)
T ss_dssp TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTS
T ss_pred cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCC
Confidence 255666666777777666543
Q ss_pred ---------CeeeeeeccCCcceEEEEEecCCCceEE---------------------------eeeeEEEEcCCCCEEE
Q psy10942 385 ---------STCVSTFDKHALKIWTLAITKDENQIIT---------------------------GGVWFVNFSPLDRILI 428 (537)
Q Consensus 385 ---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------~~i~~~~~s~~~~~l~ 428 (537)
++.+..+. +...+.+++++ +..+++ +.+.+++|+|++++|+
T Consensus 428 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 504 (615)
T 1pgu_A 428 DLLILQSFTGDIIKSVR-LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 504 (615)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEE
T ss_pred ceEEEeccCCceeeecc-cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEE
Confidence 22222222 33344444444 222221 2588999999999999
Q ss_pred EEeCCCcEEEEECCCceeeeEeec-CCcceEEEEEec----------CCCEEEEEeCCCcEEEEECCCC-eeEEEecCCc
Q psy10942 429 SSSGDATIKLWCLTDYVCLKSLEG-HDASVLRCHFIN----------KGTQIVSTGADGLLKLWSIKTS-TCVSTFDKHA 496 (537)
Q Consensus 429 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l~s~~~dg~v~vwd~~~~-~~~~~~~~~~ 496 (537)
+++.||.|++||+.+++.+..+.+ |...|++++|+| ++++|++++.||.|++||+.++ +++..+.+|.
T Consensus 505 ~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~ 584 (615)
T 1pgu_A 505 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK 584 (615)
T ss_dssp EEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST
T ss_pred EcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCc
Confidence 999999999999999999999988 999999999999 9999999999999999999998 8889999999
Q ss_pred cceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 497 LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 497 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
..| .++ +|+|+++ |++++.||.|++|
T Consensus 585 ~~v-----------~~l---~~s~~~~-l~s~~~d~~v~iw 610 (615)
T 1pgu_A 585 DGV-----------NNL---LWETPST-LVSSGADACIKRW 610 (615)
T ss_dssp TCE-----------EEE---EEEETTE-EEEEETTSCEEEE
T ss_pred cce-----------EEE---EEcCCCC-eEEecCCceEEEE
Confidence 999 999 9999999 9999999999999
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-51 Score=425.62 Aligned_cols=438 Identities=9% Similarity=0.021 Sum_probs=333.2
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
..|+|++|+ |++++|++|+.||.|++||..+++....+++..++..+ .+.| + ++|++++.|+.|++|
T Consensus 18 ~~V~~lafs--pdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l--~fsp--------g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 18 SKPIAAAFD--FTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEM--RFVK--------G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp SCEEEEEEE--TTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEE--EEET--------T-TEEEEEETTCEEEEE
T ss_pred CCcEEEEEC--CCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEE--EEcC--------C-CEEEEEECcCeEEEE
Confidence 469999999 89999999999999999999988887777777778888 5566 3 389999999999999
Q ss_pred eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccccee-----------EEeecchhh
Q psy10942 83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFR-----------KQFVGFSDE 151 (537)
Q Consensus 83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 151 (537)
|+.+++.+..+.+++.|.+++|+|++++|++|+.||.|++||+.++ .+. ..+.+|.+.
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-----------~~~~~~i~~~~~~~~~~~~h~~~ 153 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD-----------QLSSFKLDNLQKSSFFPAARLSP 153 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT-----------EEEEEEECCHHHHHTCSSSCCCC
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC-----------ccccceeccccccccccccCCCC
Confidence 9999998888887789999999999999999999999999999883 321 234678899
Q ss_pred hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc------------
Q psy10942 152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT------------ 217 (537)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~------------ 217 (537)
|.+++|+|.+...+++++.++. .+||+ ++.++. +...
T Consensus 154 V~sl~~sp~~~~~l~~g~~dg~----------------------vlWd~-------~~~~~~~~~~~~~~~g~~~~~~~~ 204 (902)
T 2oaj_A 154 IVSIQWNPRDIGTVLISYEYVT----------------------LTYSL-------VENEIKQSFIYELPPFAPGGDFSE 204 (902)
T ss_dssp CCEEEEETTEEEEEEEECSSCE----------------------EEEET-------TTTEEEEEECCCBCTTCCCSTTCC
T ss_pred eEEEEEccCCCCEEEEEeCCCc----------------------EEEEC-------CCCceEEEEecccCCcCCCccccc
Confidence 9999999545567777766654 46887 655544 2200
Q ss_pred -ccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc-------------------cccccee
Q psy10942 218 -ERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF-------------------VPEAEHG 277 (537)
Q Consensus 218 -~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-------------------~~~~~~~ 277 (537)
...+| ...|.++ +|+|+|++|++++.|+.|+ +||+..+.......+ ..++..+
T Consensus 205 ~~~~~h--~~~V~~v---~fspdg~~lasgs~Dg~i~--lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v 277 (902)
T 2oaj_A 205 KTNEKR--TPKVIQS---LYHPNSLHIITIHEDNSLV--FWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKV 277 (902)
T ss_dssp CTTSCB--CCCEEEE---EECTTSSEEEEEETTCCEE--EEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEE
T ss_pred cccccc--CCCeEEE---EEcCCCCEEEEEECCCeEE--EEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEE
Confidence 11245 6789999 9999999999999999999 999987543211000 0012222
Q ss_pred eeeeCC---cceEEEEEeCC-----CeEEEEECCC------------------Cceeeeeeccccc-ccCCCeEEEEEcC
Q psy10942 278 AFYTGG---TVELLASGSLD-----KTVKVWSTTG------------------GLKLLNVLRGHKK-GHEKDINCVTVSP 330 (537)
Q Consensus 278 ~~~~~~---~v~~l~~~~~d-----~~i~i~~~~~------------------~~~~~~~~~~~~~-~~~~~v~~~~~s~ 330 (537)
.+.... .-..+++|+.+ ..+.+|++.. .+. ...+. .+...|.++.+.+
T Consensus 278 ~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~ 352 (902)
T 2oaj_A 278 YWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQ-----MKIFPLPTNVPIVNILPIP 352 (902)
T ss_dssp EEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSE-----EEEECCSSSSCEEEEEECC
T ss_pred EEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccc-----eEEEecCCCCceEEEEECC
Confidence 332211 11467777665 3788888421 111 11111 3567888998866
Q ss_pred ----------CCCEEEEEeCCCcEEEEEccCCcee----------------eEEE-------------------------
Q psy10942 331 ----------NDKLLASGSLDKTVKVWSTTGGLKL----------------LNVL------------------------- 359 (537)
Q Consensus 331 ----------~~~~l~~~~~d~~i~i~d~~~~~~~----------------~~~~------------------------- 359 (537)
+...+++++.|+.|++||+..+... +..+
T Consensus 353 ~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~ 432 (902)
T 2oaj_A 353 RQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK 432 (902)
T ss_dssp SSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC
T ss_pred CCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc
Confidence 3447888999999999998632111 1111
Q ss_pred ---------EecCCCCEEEEEcCCCcEEEEECCCCeeee--eec---------cCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942 360 ---------RGHKKGTQIVSTGADGLLKLWSIKTSTCVS--TFD---------KHALKIWTLAITKDENQIITGGVWFVN 419 (537)
Q Consensus 360 ---------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~---------~~~~~i~~~~~~~~~~~~~~~~i~~~~ 419 (537)
..++++..+++++.|++|++||+.+++... .+. +|.. .|.+++
T Consensus 433 G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~-----------------~V~sva 495 (902)
T 2oaj_A 433 GGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKEL-----------------AVDKIS 495 (902)
T ss_dssp CSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSC-----------------CEEEEE
T ss_pred CCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCC-----------------ceeEEE
Confidence 113457899999999999999999874210 010 2222 789999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCc---------------------------------------------eeeeEeecCC
Q psy10942 420 FSPLDRILISSSGDATIKLWCLTDY---------------------------------------------VCLKSLEGHD 454 (537)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~---------------------------------------------~~~~~~~~~~ 454 (537)
|+||+++||+|+.||+|++||+.++ +++..+.+|.
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~ 575 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK 575 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC
Confidence 9999999999999999999998765 3467888999
Q ss_pred cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE-----Eec-CCccceeccCCCCCCccccccceeee-----cCC-
Q psy10942 455 ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS-----TFD-KHALKIRNSDSENDHKGFGLPRQLCS-----RNS- 522 (537)
Q Consensus 455 ~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~-----~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s-----~~~- 522 (537)
+.|++++||||| +||+|+.|++|++||++++..+. .+. +|...| +++ +|+ |||
T Consensus 576 ~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V-----------~sv---~Fs~~~~~~Dg~ 640 (902)
T 2oaj_A 576 GKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACV-----------TCI---EFVIMEYGDDGY 640 (902)
T ss_dssp CSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCE-----------EEE---EEEEEECTTSSS
T ss_pred CcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccce-----------EEE---EEEEEecCCCCC
Confidence 999999999999 99999999999999998887664 232 788889 999 999 886
Q ss_pred --CEEEEEeCCCCEEeC
Q psy10942 523 --DCEYRGGWSPQVVVY 537 (537)
Q Consensus 523 --~~l~s~~~dg~i~vW 537 (537)
++|++++.|++|++|
T Consensus 641 ~~~~l~sgs~D~tv~~w 657 (902)
T 2oaj_A 641 SSILMVCGTDMGEVITY 657 (902)
T ss_dssp EEEEEEEEETTSEEEEE
T ss_pred cceEEEEEecCCcEEEE
Confidence 899999999999998
No 9
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-45 Score=376.53 Aligned_cols=419 Identities=13% Similarity=0.091 Sum_probs=332.3
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce----ehhhhcCCC-cc-eEEEEEec--cccEEEEEe
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV----KELYQHGLS-SP-LVRIVRSS--VKRMYAVVT 115 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~----~~~~~~~~~-~~-v~~~~~s~--~~~~la~~~ 115 (537)
+...+..+ .++| +++++++++ ++.|++||+.++ +.+..+..| +. |.+++|+| ++++||+++
T Consensus 17 ~~~~v~~~--~~sp--------dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~ 85 (615)
T 1pgu_A 17 QRNFTTHL--SYDP--------TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD 85 (615)
T ss_dssp CTTCCCCC--EEET--------TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE
T ss_pred ccCceeEE--EECC--------CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec
Confidence 44556666 6688 667888877 789999999998 888888766 57 99999999 999999999
Q ss_pred CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhH
Q psy10942 116 ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFD 195 (537)
Q Consensus 116 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (537)
.|+.|++||+.++.. ...........+..|...|.+++|+ ++++++++++.+.+..+.|
T Consensus 86 ~dg~v~vw~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~~~~~~~~v----------------- 144 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKE---SNSVEVNVKSEFQVLAGPISDISWD-FEGRRLCVVGEGRDNFGVF----------------- 144 (615)
T ss_dssp TTSEEEEEEEEEEGG---GTEEEEEEEEEEECCSSCEEEEEEC-TTSSEEEEEECCSSCSEEE-----------------
T ss_pred CCCEEEEEeCCCCcc---cccccccccchhhcccccEEEEEEe-CCCCEEEEeccCCCCccEE-----------------
Confidence 999999999975200 0000146777888899999999999 7888888888764333448
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCccccccc-cc-
Q psy10942 196 KTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIF-VP- 272 (537)
Q Consensus 196 ~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-~~- 272 (537)
.+||. ......+. +| ...|.++ +|+|+++ .+++++.|+.++ +|+............ ..
T Consensus 145 ~~~d~-------~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~l~~~~~d~~v~--vwd~~~~~~~~~~~~~~~~ 205 (615)
T 1pgu_A 145 ISWDS-------GNSLGEVS-----GH--SQRINAC---HLKQSRPMRSMTVGDDGSVV--FYQGPPFKFSASDRTHHKQ 205 (615)
T ss_dssp EETTT-------CCEEEECC-----SC--SSCEEEE---EECSSSSCEEEEEETTTEEE--EEETTTBEEEEEECSSSCT
T ss_pred EEEEC-------CCcceeee-----cC--CccEEEE---EECCCCCcEEEEEeCCCcEE--EEeCCCcceeeeecccCCC
Confidence 88886 44333377 89 9999999 9999998 799999999999 999877432211110 11
Q ss_pred --ccceeeeeeC-CcceEEEEEeCCCeEEEEECCCCceeeeeecccc-c---ccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy10942 273 --EAEHGAFYTG-GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK-K---GHEKDINCVTVSPNDKLLASGSLDKTVK 345 (537)
Q Consensus 273 --~~~~~~~~~~-~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 345 (537)
.+..+..+.. . +++++++.|+.|++||+.+++... .+ . .|...|.+++|+ ++++|++++.|+.|+
T Consensus 206 ~~~v~~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~ 277 (615)
T 1pgu_A 206 GSFVRDVEFSPDSG--EFVITVGSDRKISCFDGKSGEFLK-----YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR 277 (615)
T ss_dssp TCCEEEEEECSTTC--CEEEEEETTCCEEEEETTTCCEEE-----ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred CceEEEEEECCCCC--CEEEEEeCCCeEEEEECCCCCEeE-----EecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence 1233333333 2 589999999999999999887643 23 4 789999999999 999999999999999
Q ss_pred EEEccCCceeeEEEEecC-------------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC------
Q psy10942 346 VWSTTGGLKLLNVLRGHK-------------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD------ 406 (537)
Q Consensus 346 i~d~~~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~------ 406 (537)
+||+. ..+.+..+..+. ++..+++++.++.|++||+.+++.+..+..|...+.++.+ |+
T Consensus 278 ~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~ 355 (615)
T 1pgu_A 278 VWDVT-TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSY 355 (615)
T ss_dssp EEETT-TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEET
T ss_pred EEECC-CCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECC
Confidence 99999 666676666552 5789999999999999999998888888777776666665 43
Q ss_pred ---------------------------CCceEEe------------------eeeEEEEcCC------------------
Q psy10942 407 ---------------------------ENQIITG------------------GVWFVNFSPL------------------ 423 (537)
Q Consensus 407 ---------------------------~~~~~~~------------------~i~~~~~s~~------------------ 423 (537)
+..++++ .+..++++|+
T Consensus 356 dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 435 (615)
T 1pgu_A 356 DGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSF 435 (615)
T ss_dssp TSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETT
T ss_pred CCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEecc
Confidence 3333322 1223333333
Q ss_pred --------------------CCEEEEEeC-CCcEEEEECCCceee-eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942 424 --------------------DRILISSSG-DATIKLWCLTDYVCL-KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481 (537)
Q Consensus 424 --------------------~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw 481 (537)
+++|++++. |+.|++||+.+++.. ..+.+|...|++++|+|++++|++++.||.|++|
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 515 (615)
T 1pgu_A 436 TGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLY 515 (615)
T ss_dssp TCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEe
Confidence 677888888 999999999887665 6777899999999999999999999999999999
Q ss_pred ECCCCeeEEEecC-CccceeccCCCCCCccccccceeeec----------CCCEEEEEeCCCCEEeC
Q psy10942 482 SIKTSTCVSTFDK-HALKIRNSDSENDHKGFGLPRQLCSR----------NSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 482 d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~s~----------~~~~l~s~~~dg~i~vW 537 (537)
|+.+++.+..+.+ |...| +++ +|+| ++++|++++.||.|++|
T Consensus 516 ~~~~~~~~~~~~~~h~~~v-----------~~~---~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw 568 (615)
T 1pgu_A 516 DLQSREVKTSRWAFRTSKI-----------NAI---SWKPAEKGANEEEIEEDLVATGSLDTNIFIY 568 (615)
T ss_dssp ETTTTEEEECCSCCCSSCE-----------EEE---EECCCC------CCSCCEEEEEETTSCEEEE
T ss_pred eCCCCcceeEeecCCCCce-----------eEE---EEcCccccccccccCCCEEEEEcCCCcEEEE
Confidence 9999999999988 99999 999 9999 99999999999999998
No 10
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-46 Score=393.74 Aligned_cols=428 Identities=10% Similarity=0.054 Sum_probs=304.9
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
..|++++|+ + +++|++++.|++|++||+++++.+..+.+...+.++ .+.| ++.++++++.||.|++|
T Consensus 59 ~~V~~l~fs--p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v--~~sp--------~g~~l~sgs~dg~V~lw 125 (902)
T 2oaj_A 59 SAIKEMRFV--K-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSI--DTDA--------SLDWMLIGLQNGSMIVY 125 (902)
T ss_dssp CCEEEEEEE--T-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEE--ECCT--------TCSEEEEEETTSCEEEE
T ss_pred CCEEEEEEc--C-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEE--EECC--------CCCEEEEEcCCCcEEEE
Confidence 469999999 5 679999999999999999999999888766677777 5678 67899999999999999
Q ss_pred eccceehh-----------hhcC-CCcceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc-
Q psy10942 83 ETSAVKEL-----------YQHG-LSSPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF- 148 (537)
Q Consensus 83 d~~~~~~~-----------~~~~-~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~- 148 (537)
|+.+++.. ..+. +.+.|.+++|+|+ +..|++++.|+.| +||+.+ .+..+.+.+|
T Consensus 126 d~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-----------~~~~~~~~~~~ 193 (902)
T 2oaj_A 126 DIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-----------NEIKQSFIYEL 193 (902)
T ss_dssp ETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-----------TEEEEEECCCB
T ss_pred ECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-----------CceEEEEeccc
Confidence 99887653 2233 3369999999996 5789999999999 999998 5666666655
Q ss_pred -----------------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc
Q psy10942 149 -----------------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS 211 (537)
Q Consensus 149 -----------------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~ 211 (537)
...|.+++|+ |++.+|++++.++. | ++||+ .+++
T Consensus 194 ~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~----i-----------------~lWd~-------~~g~ 244 (902)
T 2oaj_A 194 PPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHEDNS----L-----------------VFWDA-------NSGH 244 (902)
T ss_dssp CTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETTCC----E-----------------EEEET-------TTCC
T ss_pred CCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECCCe----E-----------------EEEEC-------CCCc
Confidence 4679999999 77888988888877 9 99999 7665
Q ss_pred cc-cc-ccccc-------------cCCCcCeEEEEeccCcc----cCC-CeeeeccCCC-----cceeccccccCC----
Q psy10942 212 QQ-KH-NTERL-------------GRDELKTVTLLERGKTV----KEE-DLFPRQSMEP-----STLEELEKRKTY---- 262 (537)
Q Consensus 212 ~~-l~-~~~~~-------------~h~~~~~v~~~~~~~~s----~~~-~~l~~~~~d~-----~i~~~iw~~~~~---- 262 (537)
+. .. ..... .| ...|.++ +|+ |++ .++++|+.+. .+. +|++...
T Consensus 245 ~~~~r~l~~~~~~~~~~~~~~~~~~~--~~~V~~v---~w~~~~~pd~~~ll~sg~~~~~~~~~~v~--~~~~~~~~~~~ 317 (902)
T 2oaj_A 245 MIMARTVFETEINVPQPDYIRDSSTN--AAKISKV---YWMCENNPEYTSLLISHKSISRGDNQSLT--MIDLGYTPRYS 317 (902)
T ss_dssp EEEEECSSCSCTTSCCTTCCCCCSSC--CCEEEEE---EEEECSSTTEEEEEEEEECSTTSSCCCEE--EEEEEECCCGG
T ss_pred EEEEEeecccccCCCCCcCCCCCccc--cCCeeEE---EEEecCCCCCCEEEEeCCCCCCCCCceEE--EEecCCCCCcc
Confidence 54 11 00000 14 5589999 885 443 5677776652 677 7774310
Q ss_pred --------------Cccccccc--ccccceeeeee--C------CcceEEEEEeCCCeEEEEECCCCceeeee--ecc--
Q psy10942 263 --------------HFPLFGIF--VPEAEHGAFYT--G------GTVELLASGSLDKTVKVWSTTGGLKLLNV--LRG-- 314 (537)
Q Consensus 263 --------------~~~~~~~~--~~~~~~~~~~~--~------~~v~~l~~~~~d~~i~i~~~~~~~~~~~~--~~~-- 314 (537)
........ ......+.... . ..-..+++++.|+.|++|++.++...... ...
T Consensus 318 ~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l 397 (902)
T 2oaj_A 318 ITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNL 397 (902)
T ss_dssp GCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGG
T ss_pred ccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcc
Confidence 00000000 00000111000 0 00126788889999999999766432210 001
Q ss_pred --------------------------------cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---------
Q psy10942 315 --------------------------------HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL--------- 353 (537)
Q Consensus 315 --------------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--------- 353 (537)
.+.+|...+.+++|+|++++|++|+.|++|++||+....
T Consensus 398 ~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 398 SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEe
Confidence 123444455556668999999999999999999986321
Q ss_pred -----------eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeee-----------------eccCCcc--------
Q psy10942 354 -----------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST-----------------FDKHALK-------- 397 (537)
Q Consensus 354 -----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-----------------~~~~~~~-------- 397 (537)
..+..+..++++.+|++++.||+|++||+.+++.... +......
T Consensus 478 ~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRA 557 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGC
T ss_pred echhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccC
Confidence 2366777888999999999999999999987632100 0000000
Q ss_pred -------eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeee-----Eee-cCCcceEEEEEe-
Q psy10942 398 -------IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLK-----SLE-GHDASVLRCHFI- 463 (537)
Q Consensus 398 -------i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~-~~~~~v~~~~~s- 463 (537)
...+..-.. ..+.|++++||||| +||+|+.|++|++||+.++..+. .+. +|.+.|++++|+
T Consensus 558 ~~~~~~g~~~~~~l~~----h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~ 632 (902)
T 2oaj_A 558 PTGVRQGFMPSTAVHA----NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVI 632 (902)
T ss_dssp CTTCSEEEEEEEEECC----CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEE
T ss_pred CCCCCCccceeEEEEc----CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEE
Confidence 000110000 12389999999999 99999999999999998877654 333 889999999999
Q ss_pred ----cCC---CEEEEEeCCCcEEEEEC---CCCeeEEEecCCc
Q psy10942 464 ----NKG---TQIVSTGADGLLKLWSI---KTSTCVSTFDKHA 496 (537)
Q Consensus 464 ----~~~---~~l~s~~~dg~v~vwd~---~~~~~~~~~~~~~ 496 (537)
||| ++|++++.|++|++||+ .+|+....+.+|.
T Consensus 633 ~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~ 675 (902)
T 2oaj_A 633 MEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDIT 675 (902)
T ss_dssp EECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCce
Confidence 885 89999999999999999 7888888888774
No 11
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.9e-45 Score=383.91 Aligned_cols=438 Identities=13% Similarity=0.149 Sum_probs=339.3
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
..|+|++|+ |++.+|++++.+|.|++||+.+++.+..+. +..++..+ .++| +++++++++.||.|++
T Consensus 14 ~~v~~i~~s--p~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~--~~s~--------~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 14 DRVKGIDFH--PTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAG--KFIA--------RKNWIIVGSDDFRIRV 81 (814)
T ss_dssp SCEEEEEEC--SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE--EEEG--------GGTEEEEEETTSEEEE
T ss_pred CceEEEEEC--CCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEE--EEeC--------CCCEEEEEeCCCeEEE
Confidence 469999999 899999999999999999999999998887 56677777 6688 6789999999999999
Q ss_pred eeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942 82 YETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE 160 (537)
Q Consensus 82 wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (537)
||+.+++.+..+..| +.|.+++|+|++++|++++.|+.|++||+.++ ......+.+|...|.+++|+|.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~----------~~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----------WALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT----------SEEEEEEECCSSCEEEEEEETT
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC----------ceEEEEEcCCCCcEEEEEEEcC
Confidence 999999998888755 68999999999999999999999999999883 3677888999999999999954
Q ss_pred CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942 161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK 238 (537)
Q Consensus 161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~ 238 (537)
++..+++++.++. | ++||+ ...... +. ..+ ...+.++ +|+|
T Consensus 152 ~~~~l~~~~~dg~----v-----------------~vwd~-------~~~~~~~~~~----~~~--~~~v~~~---~~~~ 194 (814)
T 3mkq_A 152 DPSTFASGCLDRT----V-----------------KVWSL-------GQSTPNFTLT----TGQ--ERGVNYV---DYYP 194 (814)
T ss_dssp EEEEEEEEETTSE----E-----------------EEEET-------TCSSCSEEEE----CCC--TTCCCEE---EECC
T ss_pred CCCEEEEEeCCCe----E-----------------EEEEC-------CCCcceeEEe----cCC--CCCEEEE---EEEE
Confidence 7788888887777 9 99998 665554 33 134 5889999 9998
Q ss_pred --CCCeeeeccCCCcceeccccccCCCcccccc-cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942 239 --EEDLFPRQSMEPSTLEELEKRKTYHFPLFGI-FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315 (537)
Q Consensus 239 --~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 315 (537)
++.++++++.|+.++ +|++..+....... ....+..+..+... ..+++++.||.|++||..+++. ...
T Consensus 195 ~~~~~~l~~~~~dg~i~--~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~v~vwd~~~~~~-----~~~ 265 (814)
T 3mkq_A 195 LPDKPYMITASDDLTIK--IWDYQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKIWNSSTYKV-----EKT 265 (814)
T ss_dssp STTCCEEEEECTTSEEE--EEETTTTEEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEEEETTTCSE-----EEE
T ss_pred CCCCCEEEEEeCCCEEE--EEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcE-----EEE
Confidence 999999999999999 99998743211110 00112222222222 5899999999999999998876 344
Q ss_pred ccccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc---EEE------EECCC
Q psy10942 316 KKGHEKDINCVTVSPNDK--LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL---LKL------WSIKT 384 (537)
Q Consensus 316 ~~~~~~~v~~~~~s~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~---i~i------~d~~~ 384 (537)
+..|...+.+++|+|+++ +++++ .++.+.+|++.. ... .+...+++..+++++.+.. +.. |++..
T Consensus 266 ~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (814)
T 3mkq_A 266 LNVGLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGN-DEP--TLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQ 341 (814)
T ss_dssp ECCSSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSC-CSC--CEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCS
T ss_pred eecCCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCC-CCc--eeEECCCCCEEEECcccccceeeeeeeccccccccc
Confidence 567888999999999987 35544 567789999873 222 2333455666666554432 111 22222
Q ss_pred Ceee----eeeccCCcceEEEEEecCCCceEE-------------------eeeeEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy10942 385 STCV----STFDKHALKIWTLAITKDENQIIT-------------------GGVWFVNFSPLDRILISSSGDATIKLWCL 441 (537)
Q Consensus 385 ~~~~----~~~~~~~~~i~~~~~~~~~~~~~~-------------------~~i~~~~~s~~~~~l~~~~~dg~i~i~d~ 441 (537)
+... ..+..+...+.+++++|+++.++. +.+.+++|+|+++++++++.+|.|++|+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~- 420 (814)
T 3mkq_A 342 DEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK- 420 (814)
T ss_dssp SSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEEEE-
T ss_pred CccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEE-
Confidence 2222 223445556777778887776664 3577899999999999999999999996
Q ss_pred CCceeeeEeecCCcceEEEEEecCC---CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceee
Q psy10942 442 TDYVCLKSLEGHDASVLRCHFINKG---TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLC 518 (537)
Q Consensus 442 ~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 518 (537)
.+.+|...+.+++|+|++ ++|++++.|+.|++||+.+++.+..+..|...+ +|
T Consensus 421 -------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v-----------------~~ 476 (814)
T 3mkq_A 421 -------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDV-----------------IW 476 (814)
T ss_dssp -------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEEEE-----------------EE
T ss_pred -------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCCEE-----------------EE
Confidence 345688889999999998 688999999999999999999999988776544 99
Q ss_pred ecCCCEEEEE------eCCCCEEeC
Q psy10942 519 SRNSDCEYRG------GWSPQVVVY 537 (537)
Q Consensus 519 s~~~~~l~s~------~~dg~i~vW 537 (537)
+|||++|+++ +.++.+.+|
T Consensus 477 s~dg~~la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 477 SDNGELVMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp CTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred cCCCCEEEEEEcCcccCCceEEEEE
Confidence 9999999999 555555443
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5e-44 Score=343.75 Aligned_cols=296 Identities=22% Similarity=0.310 Sum_probs=246.8
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
+.+.|.+++|+|++++|++|+.|++|++||+.+ ++....+.+|.+.|.+++|+ +++++|++++.++.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~-----------~~~~~~l~~h~~~V~~v~~~-~~~~~l~sgs~D~~- 173 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-----------GDFERTLKGHTDSVQDISFD-HSGKLLASCSADMT- 173 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTT-----------CCCCEEECCCSSCEEEEEEC-TTSSEEEEEETTSC-
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CcEEEEEeccCCcEEEEEEc-CCCCEEEEEeCCCe-
Confidence 347999999999999999999999999999999 67888999999999999999 77888888888877
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST 252 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i 252 (537)
| ++||+ .+.++. +. +| ...|.++ +|+|++++|++++.|+.|
T Consensus 174 ---i-----------------~iwd~-------~~~~~~~~~~-----~h--~~~V~~v---~~~p~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 174 ---I-----------------KLWDF-------QGFECIRTMH-----GH--DHNVSSV---SIMPNGDHIVSASRDKTI 216 (410)
T ss_dssp ---C-----------------CEEET-------TSSCEEECCC-----CC--SSCEEEE---EECSSSSEEEEEETTSEE
T ss_pred ---E-----------------EEEeC-------CCCceeEEEc-----CC--CCCEEEE---EEeCCCCEEEEEeCCCeE
Confidence 9 99999 777766 77 99 9999999 999999999998888888
Q ss_pred eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942 253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND 332 (537)
Q Consensus 253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 332 (537)
+ +|++..+ .. ...+.+|...|.++.++|++
T Consensus 217 ~--~wd~~~~-------------------------------------------~~-----~~~~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 217 K--MWEVQTG-------------------------------------------YC-----VKTFTGHREWVRMVRPNQDG 246 (410)
T ss_dssp E--EEETTTC-------------------------------------------CE-----EEEEECCSSCEEEEEECTTS
T ss_pred E--EEECCCC-------------------------------------------cE-----EEEEeCCCccEEEEEECCCC
Confidence 8 8877652 11 12235688889999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942 333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412 (537)
Q Consensus 333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 412 (537)
++|++++.|+.|++||+. .......+ ..|...+.++.++|++.....
T Consensus 247 ~~l~s~s~D~~v~vwd~~-~~~~~~~~--------------------------------~~h~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVA-TKECKAEL--------------------------------REHRHVVECISWAPESSYSSI 293 (410)
T ss_dssp SEEEEEETTSCEEEEETT-TCCEEEEE--------------------------------CCCSSCEEEEEECCSCGGGGG
T ss_pred CEEEEEcCCCeEEEEECC-CCceeeEe--------------------------------cCCCceEEEEEEcCcccccch
Confidence 999999999999999988 44433333 344455555555554332110
Q ss_pred e---eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942 413 G---GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV 489 (537)
Q Consensus 413 ~---~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 489 (537)
. ........+.+.+|++|+.|+.|++||+.+++++..+.+|...|++++|+|++++|++++.|+.|++||+.+++++
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred hhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 0 0111122234789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
..+.+|...| +++ +|+|++++|++++.||.|+||
T Consensus 374 ~~~~~h~~~v-----------~~l---~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 374 KTLNAHEHFV-----------TSL---DFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp EEEECCSSCE-----------EEE---EECSSSSCEEEEETTSEEEEE
T ss_pred EEEcCCCCcE-----------EEE---EEcCCCCEEEEEeCCCcEEEE
Confidence 9999999999 999 999999999999999999999
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=328.28 Aligned_cols=281 Identities=20% Similarity=0.287 Sum_probs=242.6
Q ss_pred CCcceEEEEEecc----ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee
Q psy10942 95 LSSPLVRIVRSSV----KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN 170 (537)
Q Consensus 95 ~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 170 (537)
+.+.|.+++|+|+ +++|++|+.|++|++|++..+. ......+.+|...|.+++|+ +++..+++++.
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~---------~~~~~~l~gh~~~v~~~~~~-~~~~~l~s~s~ 100 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER---------LDLQWSLEGHQLGVVSVDIS-HTLPIAASSSL 100 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE---------EEEEEEECCCSSCEEEEEEC-SSSSEEEEEET
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC---------eeeeeeeccCCCCEEEEEEC-CCCCEEEEEeC
Confidence 4479999999985 6689999999999999998721 23456789999999999999 77788888887
Q ss_pred ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942 171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM 248 (537)
Q Consensus 171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~ 248 (537)
++. | ++||+ .+++.. +. .| ...+.++ +|+|++++|++++.
T Consensus 101 D~~----i-----------------~lWd~-------~~~~~~~~~~-----~~--~~~~~~~---~~spdg~~l~~g~~ 142 (321)
T 3ow8_A 101 DAH----I-----------------RLWDL-------ENGKQIKSID-----AG--PVDAWTL---AFSPDSQYLATGTH 142 (321)
T ss_dssp TSE----E-----------------EEEET-------TTTEEEEEEE-----CC--TTCCCCE---EECTTSSEEEEECT
T ss_pred CCc----E-----------------EEEEC-------CCCCEEEEEe-----CC--CccEEEE---EECCCCCEEEEEcC
Confidence 777 9 99999 777766 66 78 8889999 99999999999998
Q ss_pred CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942 249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV 328 (537)
Q Consensus 249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 328 (537)
|+.++ +|++..+. . ...+..|...|.+++|
T Consensus 143 dg~v~--i~~~~~~~-------------------------------------------~-----~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 143 VGKVN--IFGVESGK-------------------------------------------K-----EYSLDTRGKFILSIAY 172 (321)
T ss_dssp TSEEE--EEETTTCS-------------------------------------------E-----EEEEECSSSCEEEEEE
T ss_pred CCcEE--EEEcCCCc-------------------------------------------e-----eEEecCCCceEEEEEE
Confidence 88888 88876621 1 1112345677999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942 329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN 408 (537)
Q Consensus 329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 408 (537)
+|++++|++++.|+.|++||+. ..+.+..+..|..
T Consensus 173 spdg~~lasg~~dg~i~iwd~~-~~~~~~~~~~h~~-------------------------------------------- 207 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIA-TGKLLHTLEGHAM-------------------------------------------- 207 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSS--------------------------------------------
T ss_pred CCCCCEEEEEcCCCeEEEEECC-CCcEEEEEcccCC--------------------------------------------
Confidence 9999999999999999999998 5555555554433
Q ss_pred ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
.|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.++++
T Consensus 208 -----~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 208 -----PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp -----CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred -----ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+..+.+|...| .++ +|+|++++|++++.||.|+||
T Consensus 283 ~~~~~~h~~~v-----------~~v---~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 283 VHTFFDHQDQV-----------WGV---KYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEEECCCSSCE-----------EEE---EECTTSSEEEEEETTCCEEEE
T ss_pred EEEEcCCCCcE-----------EEE---EECCCCCEEEEEeCCCeEEEE
Confidence 99999999999 999 999999999999999999998
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.9e-42 Score=328.35 Aligned_cols=308 Identities=14% Similarity=0.187 Sum_probs=253.8
Q ss_pred ceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942 77 SLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI 155 (537)
Q Consensus 77 ~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 155 (537)
..+..|+..+..+...+.+| +.|.+++|+|++++||+|+.|++|++||+.+ .+....+..|...|.++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~-----------~~~~~~~~~h~~~v~~~ 114 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT-----------SQKTHAIKLHCPWVMEC 114 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT-----------TEEEEEEECCCTTCCCC
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CccceEEecCCCCEEEE
Confidence 34567777777778888866 6999999999999999999999999999998 67888999999999999
Q ss_pred hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEE
Q psy10942 156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLL 231 (537)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~ 231 (537)
+|+ |+++++++++.++. + ++||+ ...... .....+.+| .+.|.++
T Consensus 115 ~~s-~~g~~las~~~d~~----v-----------------~iw~~-------~~~~~~~~~~~~~~~~~gh--~~~v~~~ 163 (380)
T 3iz6_a 115 AFA-PNGQSVACGGLDSA----C-----------------SIFNL-------SSQADRDGNMPVSRVLTGH--KGYASSC 163 (380)
T ss_dssp EEC-TTSSEEEECCSSSC----C-----------------EEEEC-------CCCSSCCCSSTTCCBCCCC--SSCCCCC
T ss_pred EEC-CCCCEEEEeeCCCc----E-----------------EEEEC-------CCCccccCCccceeeccCC--CcceEEE
Confidence 999 78889988888777 9 99988 432110 001122399 9999999
Q ss_pred eccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942 232 ERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN 310 (537)
Q Consensus 232 ~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~ 310 (537)
.|+|++ ..|++++.|+.++ +||+..+. .+..+.
T Consensus 164 ---~~~~~~~~~l~s~s~D~~i~--~wd~~~~~--------------------------------~~~~~~--------- 197 (380)
T 3iz6_a 164 ---QYVPDQETRLITGSGDQTCV--LWDVTTGQ--------------------------------RISIFG--------- 197 (380)
T ss_dssp ---BCCSSSSSCEEEECTTSCEE--EECTTTCC--------------------------------EEEEEC---------
T ss_pred ---EEecCCCCEEEEECCCCcEE--EEEcCCCc--------------------------------EEEEee---------
Confidence 999874 5688999999999 89887731 111111
Q ss_pred eecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942 311 VLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS 389 (537)
Q Consensus 311 ~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 389 (537)
.....+|...|.+++|+| ++++|++|+.|+.|++||++.....+..+..|..
T Consensus 198 --~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~------------------------- 250 (380)
T 3iz6_a 198 --SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG------------------------- 250 (380)
T ss_dssp --CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS-------------------------
T ss_pred --cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC-------------------------
Confidence 112246889999999987 8899999999999999999744444444444433
Q ss_pred eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc-------ceEEEEE
Q psy10942 390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA-------SVLRCHF 462 (537)
Q Consensus 390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~v~~~~~ 462 (537)
.|.+++|+|++++|++|+.|++|++||+.+++.+..+..+.. .|++++|
T Consensus 251 ------------------------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (380)
T 3iz6_a 251 ------------------------DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAF 306 (380)
T ss_dssp ------------------------CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEE
T ss_pred ------------------------CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEE
Confidence 788999999999999999999999999999998888765432 4899999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeeEEEe----cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 463 INKGTQIVSTGADGLLKLWSIKTSTCVSTF----DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+|++++|++++.||.|++||+.+++.+..+ .+|...| .++ +|+|||++|++|+.||.|+||
T Consensus 307 s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v-----------~~l---~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 307 SISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI-----------SCL---GLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp CSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC-----------CEE---EECSSSSEEEEECTTSCEEEE
T ss_pred CCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce-----------EEE---EECCCCCEEEEeeCCCCEEEE
Confidence 999999999999999999999999988777 6788889 899 999999999999999999999
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.9e-42 Score=316.30 Aligned_cols=277 Identities=20% Similarity=0.262 Sum_probs=238.2
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
+.|.+++|+|++++|++++.|+.|++||+.+ ...++.+..|...|.+++|+ +++++|++++.++.
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~-----------~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~s~d~~--- 78 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYET-----------QVEVRSIQVTETPVRAGKFI-ARKNWIIVGSDDFR--- 78 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------TEEEEEEECCSSCEEEEEEE-GGGTEEEEEETTSE---
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCC-----------CceeEEeeccCCcEEEEEEe-CCCCEEEEECCCCE---
Confidence 6899999999999999999999999999998 67888999999999999999 78888988888877
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| ++||+ .+++.. +. +| ...|.++ +|+|++++|++++.|+.|+
T Consensus 79 -i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~l~sgs~D~~v~- 122 (304)
T 2ynn_A 79 -I-----------------RVFNY-------NTGEKVVDFE-----AH--PDYIRSI---AVHPTKPYVLSGSDDLTVK- 122 (304)
T ss_dssp -E-----------------EEEET-------TTCCEEEEEE-----CC--SSCEEEE---EECSSSSEEEEEETTSCEE-
T ss_pred -E-----------------EEEEC-------CCCcEEEEEe-----CC--CCcEEEE---EEcCCCCEEEEECCCCeEE-
Confidence 9 99999 877766 77 99 9999999 9999999999999999999
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCC
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDK 333 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~ 333 (537)
+|++..+. .. ...+.+|...|.+++|+| ++.
T Consensus 123 -lWd~~~~~-------------------------------------------~~----~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 123 -LWNWENNW-------------------------------------------AL----EQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp -EEEGGGTT-------------------------------------------EE----EEEECCCCSCEEEEEECTTCTT
T ss_pred -EEECCCCc-------------------------------------------ch----hhhhcccCCcEEEEEECCCCCC
Confidence 99887521 00 123457888999999999 678
Q ss_pred EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942 334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413 (537)
Q Consensus 334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 413 (537)
.|++++.|+.|++||+.. ......+..+ +..
T Consensus 155 ~l~sgs~D~~v~iwd~~~-~~~~~~~~~~-------------------------------~~~----------------- 185 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQ-STPNFTLTTG-------------------------------QER----------------- 185 (304)
T ss_dssp EEEEEETTSEEEEEETTC-SSCSEEEECC-------------------------------CTT-----------------
T ss_pred EEEEEeCCCeEEEEECCC-CCccceeccC-------------------------------CcC-----------------
Confidence 999999999999999973 2222222111 111
Q ss_pred eeeEEEEcC--CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942 414 GVWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST 491 (537)
Q Consensus 414 ~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 491 (537)
.+..+.|+| ++++|++|+.|+.|++||+.+++++..+.+|...|.+++|+|++++|++++.||+|++||+.+++++..
T Consensus 186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp CEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 566667765 778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccceeccCCCCCCccccccceeeecCCC--EEEEEeCCCCEE
Q psy10942 492 FDKHALKIRNSDSENDHKGFGLPRQLCSRNSD--CEYRGGWSPQVV 535 (537)
Q Consensus 492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~--~l~s~~~dg~i~ 535 (537)
+..|...+ +++ +|+|+++ +|++++.||.+.
T Consensus 266 ~~~~~~~~-----------~~~---~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 266 LNVGLERS-----------WCI---ATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp ECCSSSSE-----------EEE---EECTTCGGGCEEEEETTEEEE
T ss_pred ccCCCccE-----------EEE---EECCCCCceEEEEecCCceEE
Confidence 99999999 889 9999886 588888877654
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-42 Score=325.78 Aligned_cols=311 Identities=12% Similarity=0.102 Sum_probs=224.2
Q ss_pred EEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC------CceEEEEecccccCccccccccccee
Q psy10942 69 FVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA------DHNISLYRLNSETGLEERPNKILKFR 142 (537)
Q Consensus 69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~ 142 (537)
+++.++.+.....|++..... ..+...|.+++|||||++||+++. |+.|++|+..++... ....
T Consensus 18 ~~~~~~g~~~~~~w~~p~~~p---~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-------~~~~ 87 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPVTAP---ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-------ESLC 87 (357)
T ss_dssp -------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C-------GGGC
T ss_pred eEEecCCCccccccCCCCCCc---ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-------eeEe
Confidence 344444467789998865432 234468999999999999999997 788999998763211 2334
Q ss_pred EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccccccc
Q psy10942 143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLG 221 (537)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~ 221 (537)
....+|...|.+++|+ +++ .+++++.++. | ++||+ .+++.. .......+
T Consensus 88 ~~~~~~~~~V~~~~~s-~d~-~~l~~s~dg~----v-----------------~lWd~-------~~~~~~~~~~~~~~~ 137 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWV-SEK-GILVASDSGA----V-----------------ELWEI-------LEKESLLVNKFAKYE 137 (357)
T ss_dssp SEEEECSSCEEEEEEE-TTT-EEEEEETTSC----E-----------------EEC---------------CCCCEEECC
T ss_pred cccCCCCCCEEEEEEc-CCC-CEEEEECCCE----E-----------------EEeec-------cccceeEEEeeccCC
Confidence 4556788889999999 554 4556666665 9 99999 666554 22223348
Q ss_pred CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942 222 RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS 301 (537)
Q Consensus 222 h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~ 301 (537)
| ...|.++ +|+|++++|++++.|+.|+ +|++..+
T Consensus 138 h--~~~V~~v---~~spdg~~l~sgs~dg~v~--iwd~~~~--------------------------------------- 171 (357)
T 4g56_B 138 H--DDIVKTL---SVFSDGTQAVSGGKDFSVK--VWDLSQK--------------------------------------- 171 (357)
T ss_dssp C--SSCEEEE---EECSSSSEEEEEETTSCEE--EEETTTT---------------------------------------
T ss_pred C--CCCEEEE---EECCCCCEEEEEeCCCeEE--EEECCCC---------------------------------------
Confidence 9 9999999 9999999999999888888 8877652
Q ss_pred CCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942 302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW 380 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 380 (537)
+. ...+..|...|.+++|+|++. ++++++.|+.|++||++ ..+....+..
T Consensus 172 ----~~-----~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~-~~~~~~~~~~------------------- 222 (357)
T 4g56_B 172 ----AV-----LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR-KPKPATRIDF------------------- 222 (357)
T ss_dssp ----EE-----EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT-SSSCBCBCCC-------------------
T ss_pred ----cE-----EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC-CCceeeeeee-------------------
Confidence 11 223457888999999999875 78899999999999987 3322221111
Q ss_pred ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE
Q psy10942 381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR 459 (537)
Q Consensus 381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 459 (537)
..+.. .+.+++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++
T Consensus 223 -----------~~~~~-----------------~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 223 -----------CASDT-----------------IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp -----------TTCCS-----------------CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred -----------ccccc-----------------cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 11111 6788899987 468999999999999999999999999999999999
Q ss_pred EEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeec-CCCEEEEEeCCCCEEeC
Q psy10942 460 CHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR-NSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 460 ~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-~~~~l~s~~~dg~i~vW 537 (537)
++|+|++ ++||+++.|++|+|||+++++++..+ +|...| +++ +|+| |+++|+|++.||+|++|
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V-----------~~v---afsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFV-----------TGV---AWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCE-----------EEE---EECSSSTTEEEEEETTSCEEEE
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCE-----------EEE---EEeCCCCCEEEEEcCCCeEEEE
Confidence 9999987 58999999999999999999887655 899999 999 9998 89999999999999998
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.4e-42 Score=320.87 Aligned_cols=284 Identities=17% Similarity=0.228 Sum_probs=242.3
Q ss_pred cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942 139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN 216 (537)
Q Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~ 216 (537)
.+..+++.+|.+.|.+++|+ +++++|++++.++. | ++||. .+++.. +.
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s-~d~~~l~s~s~Dg~----v-----------------~iWd~-------~~~~~~~~~~- 94 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWG-TDSRLLLSASQDGK----L-----------------IIWDS-------YTTNKVHAIP- 94 (340)
T ss_dssp CCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTCCEEEEEE-
T ss_pred chhheeecCCCCceEEEEEC-CCCCEEEEEeCCCc----E-----------------EEEEC-------CCCCcceEee-
Confidence 45678899999999999999 78889988888877 9 99998 776665 66
Q ss_pred cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Ccc-----eEEE
Q psy10942 217 TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTV-----ELLA 289 (537)
Q Consensus 217 ~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-----~~l~ 289 (537)
.| ...|.++ +|+|++++|++++.|+.++ +|++......... ...+.+|.. .++ ..++
T Consensus 95 ----~~--~~~v~~~---~~s~~~~~l~s~~~d~~v~--iw~~~~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~l~ 158 (340)
T 1got_B 95 ----LR--SSWVMTC---AYAPSGNYVACGGLDNICS--IYNLKTREGNVRV-----SRELAGHTGYLSCCRFLDDNQIV 158 (340)
T ss_dssp ----CS--SSCEEEE---EECTTSSEEEEEETTCEEE--EEETTTCSBSCEE-----EEEEECCSSCEEEEEEEETTEEE
T ss_pred ----cC--CccEEEE---EECCCCCEEEEEeCCCeEE--EEECccCCCccee-----EEEecCCCccEEEEEECCCCcEE
Confidence 88 9999999 9999999999999999999 9999875332222 233444443 111 4689
Q ss_pred EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIV 369 (537)
Q Consensus 290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~ 369 (537)
+++.|+.|++||+.+++. ...+.+|...|.+++|+|+++++++++.|+.|++||++ .......+..|..
T Consensus 159 s~s~d~~i~~wd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~-~~~~~~~~~~h~~----- 227 (340)
T 1got_B 159 TSSGDTTCALWDIETGQQ-----TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGMCRQTFTGHES----- 227 (340)
T ss_dssp EEETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCSEEEEECCCSS-----
T ss_pred EEECCCcEEEEECCCCcE-----EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeeEEEEcCCcC-----
Confidence 999999999999998876 34457899999999999999999999999999999998 4444444444433
Q ss_pred EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE
Q psy10942 370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS 449 (537)
Q Consensus 370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 449 (537)
.|.+++|+|++++|++|+.||.|++||+++++.+..
T Consensus 228 --------------------------------------------~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 228 --------------------------------------------DINAICFFPNGNAFATGSDDATCRLFDLRADQELMT 263 (340)
T ss_dssp --------------------------------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred --------------------------------------------CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 788999999999999999999999999999888777
Q ss_pred eec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942 450 LEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR 527 (537)
Q Consensus 450 ~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s 527 (537)
+.. +...|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...| .++ +|+|++++|++
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v-----------~~~---~~s~dg~~l~s 329 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV-----------SCL---GVTDDGMAVAT 329 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------EEE---EECTTSSCEEE
T ss_pred EccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcE-----------EEE---EEcCCCCEEEE
Confidence 753 23479999999999999999999999999999999999999999999 999 99999999999
Q ss_pred EeCCCCEEeC
Q psy10942 528 GGWSPQVVVY 537 (537)
Q Consensus 528 ~~~dg~i~vW 537 (537)
++.||.|+||
T Consensus 330 ~s~D~~i~iW 339 (340)
T 1got_B 330 GSWDSFLKIW 339 (340)
T ss_dssp EETTSCEEEE
T ss_pred EcCCccEEec
Confidence 9999999999
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=311.94 Aligned_cols=274 Identities=18% Similarity=0.148 Sum_probs=217.4
Q ss_pred cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcc--------cccc----cccccceeeeeeCCcceEE
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFP--------LFGI----FVPEAEHGAFYTGGTVELL 288 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~--------~~~~----~~~~~~~~~~~~~~~v~~l 288 (537)
.| ...|.++ +|+|||++|++++ |++++ +|+....... ..+. ....+..+.+..+ +.+
T Consensus 28 ~~--~~~v~~~---~fs~dG~~l~~~s-d~~~r--~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d---~~l 96 (344)
T 4gqb_B 28 CM--ERQLEAA---RYRSDGALLLGAS-SLSGR--CWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE---RGI 96 (344)
T ss_dssp SC--CSEEEEE---EECTTSCEEEEEE-CCSSS--CCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT---TEE
T ss_pred cc--cCCEEEE---EECCCCCEEEEEe-CCceE--EeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC---CeE
Confidence 56 7789999 9999999999887 78899 9984321000 0000 0001111222222 578
Q ss_pred EEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----
Q psy10942 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---- 364 (537)
Q Consensus 289 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---- 364 (537)
++++.||+|++||+.+++..... .....+|...|++++|+|++++|++|+.|+.|++||+. .++.+..+..|..
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~-~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~-~~~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVS-KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA-QQVVLSSYRAHAAQVTC 174 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEE
T ss_pred EEEECCCEEEEEeccCCCceeEe-eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCcCCceEE
Confidence 99999999999999988764433 44556899999999999999999999999999999999 6777777766643
Q ss_pred ------C-CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcE
Q psy10942 365 ------G-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATI 436 (537)
Q Consensus 365 ------~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i 436 (537)
+ ..+++++.|++|++||+++++....+..+... ..+.+++|+|+ +++|++|+.||.|
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~---------------~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG---------------YLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C---------------CCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEecCCCCCceeeeccccccccccccccceeeeeecceee---------------ccceeeeecCCCCcceEEeccCCcE
Confidence 4 57899999999999999999888776433211 05778889885 5789999999999
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccc
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPR 515 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 515 (537)
++||+++++++..+.+|...|++++|+|++ ++|++++.|++|+|||+.+++++ .+.+|...| +++
T Consensus 240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V-----------~~v-- 305 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFV-----------RDA-- 305 (344)
T ss_dssp EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCE-----------EEE--
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCE-----------EEE--
Confidence 999999999999999999999999999997 58999999999999999988765 578999999 999
Q ss_pred eeeecCCC-EEEEEeCCCCEEeC
Q psy10942 516 QLCSRNSD-CEYRGGWSPQVVVY 537 (537)
Q Consensus 516 ~~~s~~~~-~l~s~~~dg~i~vW 537 (537)
+|+|+++ +|++++.||+|++|
T Consensus 306 -~~sp~~~~llas~s~D~~v~~w 327 (344)
T 4gqb_B 306 -TWSPLNHSLLTTVGWDHQVVHH 327 (344)
T ss_dssp -EECSSSTTEEEEEETTSCEEEE
T ss_pred -EEeCCCCeEEEEEcCCCeEEEE
Confidence 9999987 56789999999998
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5e-42 Score=329.84 Aligned_cols=301 Identities=17% Similarity=0.294 Sum_probs=248.9
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL 122 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i 122 (537)
+..++.++ .+.| ++.++++++.|+.|++||+.+++.+..+..| +.|.+++|+|++++|++|+.|++|++
T Consensus 107 h~~~V~~~--~~~p--------~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 107 HRSPVTRV--IFHP--------VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp CSSCEEEE--EECS--------SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred cCCcEEEE--EEcC--------CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 44566666 5677 6689999999999999999999999888866 69999999999999999999999999
Q ss_pred EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942 123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL 202 (537)
Q Consensus 123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~ 202 (537)
||+.+ .+.+..+.+|...|.+++|+ |+++++++++.++. | ++||+
T Consensus 177 wd~~~-----------~~~~~~~~~h~~~V~~v~~~-p~~~~l~s~s~D~~----i-----------------~~wd~-- 221 (410)
T 1vyh_C 177 WDFQG-----------FECIRTMHGHDHNVSSVSIM-PNGDHIVSASRDKT----I-----------------KMWEV-- 221 (410)
T ss_dssp EETTS-----------SCEEECCCCCSSCEEEEEEC-SSSSEEEEEETTSE----E-----------------EEEET--
T ss_pred EeCCC-----------CceeEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCe----E-----------------EEEEC--
Confidence 99998 78889999999999999999 77888888888777 9 99999
Q ss_pred Hhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942 203 EAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY 280 (537)
Q Consensus 203 ~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~ 280 (537)
.++.+. +. +| ...|.++ .++|+++++++++.|+.++ +|++...
T Consensus 222 -----~~~~~~~~~~-----~h--~~~v~~~---~~~~~g~~l~s~s~D~~v~--vwd~~~~------------------ 266 (410)
T 1vyh_C 222 -----QTGYCVKTFT-----GH--REWVRMV---RPNQDGTLIASCSNDQTVR--VWVVATK------------------ 266 (410)
T ss_dssp -----TTCCEEEEEE-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTC------------------
T ss_pred -----CCCcEEEEEe-----CC--CccEEEE---EECCCCCEEEEEcCCCeEE--EEECCCC------------------
Confidence 887766 66 99 9999999 9999999999999988888 8887652
Q ss_pred eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR 360 (537)
Q Consensus 281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 360 (537)
.. ...+..|...|.+++|+|++.+.......+. ....
T Consensus 267 -------------------------~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~ 303 (410)
T 1vyh_C 267 -------------------------EC-----KAELREHRHVVECISWAPESSYSSISEATGS-------------ETKK 303 (410)
T ss_dssp -------------------------CE-----EEEECCCSSCEEEEEECCSCGGGGGGGCCSC-------------C---
T ss_pred -------------------------ce-----eeEecCCCceEEEEEEcCcccccchhhhccc-------------cccc
Confidence 11 1223567888999999997643211111010 0011
Q ss_pred ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942 361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC 440 (537)
Q Consensus 361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (537)
....+.++++++.|+.|++||+++++++..+.+|.. .|.+++|+|++++|++|+.|+.|++||
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~-----------------~v~~v~~~~~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN-----------------WVRGVLFHSGGKFILSCADDKTLRVWD 366 (410)
T ss_dssp ----CCEEEEEETTSEEEEEETTTTEEEEEEECCSS-----------------CEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred cCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC-----------------cEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 122467888888888888888888888888877775 788889999999999999999999999
Q ss_pred CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
+.+++++..+.+|...|++++|+|++++|++++.||+|++|+++
T Consensus 367 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999999999999999999999999999999999999863
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.7e-41 Score=318.04 Aligned_cols=288 Identities=14% Similarity=0.151 Sum_probs=239.1
Q ss_pred hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942 91 YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 91 ~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
..+.+| +.|.+++|+|++++||+++.|++|++||..+ .+....+..|...|.+++|+ |++..+++++
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~-----------~~~~~~~~~~~~~v~~~~~s-p~g~~lasg~ 125 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT-----------TNKEHAVTMPCTWVMACAYA-PSGCAIACGG 125 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCEEEEEECSSSCCCEEEEC-TTSSEEEEES
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC-----------CCcceEEecCCCCEEEEEEC-CCCCEEEEee
Confidence 344444 6899999999999999999999999999988 67778888899999999999 7888888888
Q ss_pred eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942 170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ 246 (537)
Q Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~ 246 (537)
.++. + ++|++ ...... .....+.+| ...|.++ +|+|++..|+++
T Consensus 126 ~d~~----i-----------------~v~~~-------~~~~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~l~t~ 172 (354)
T 2pbi_B 126 LDNK----C-----------------SVYPL-------TFDKNENMAAKKKSVAMH--TNYLSAC---SFTNSDMQILTA 172 (354)
T ss_dssp TTSE----E-----------------EEEEC-------CCCTTCCSGGGCEEEEEC--SSCEEEE---EECSSSSEEEEE
T ss_pred CCCC----E-----------------EEEEE-------eccccccccccceeeecc--CCcEEEE---EEeCCCCEEEEE
Confidence 7776 8 88876 322110 111122289 9999999 999999988888
Q ss_pred cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV 326 (537)
Q Consensus 247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (537)
+.|++++ +||+..+ +. ...+.+|...|.++
T Consensus 173 s~D~~v~--lwd~~~~-------------------------------------------~~-----~~~~~~h~~~v~~~ 202 (354)
T 2pbi_B 173 SGDGTCA--LWDVESG-------------------------------------------QL-----LQSFHGHGADVLCL 202 (354)
T ss_dssp ETTSEEE--EEETTTC-------------------------------------------CE-----EEEEECCSSCEEEE
T ss_pred eCCCcEE--EEeCCCC-------------------------------------------eE-----EEEEcCCCCCeEEE
Confidence 8888888 7777652 11 12235788889999
Q ss_pred EEcC--CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942 327 TVSP--NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404 (537)
Q Consensus 327 ~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 404 (537)
+|+| ++++|++++.|+.|++||++ ..+.+..+..|..
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~-~~~~~~~~~~h~~---------------------------------------- 241 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMR-SGQCVQAFETHES---------------------------------------- 241 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETT-TCCEEEEECCCSS----------------------------------------
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECC-CCcEEEEecCCCC----------------------------------------
Confidence 9987 56899999999999999988 4455554444433
Q ss_pred cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLWS 482 (537)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vwd 482 (537)
.|.+++|+|++++|++++.|+.|++||++.++.+..+..+ ...+.+++|+|++++|++++.|+.|++||
T Consensus 242 ---------~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 242 ---------DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp ---------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ---------CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence 7889999999999999999999999999998877776643 34689999999999999999999999999
Q ss_pred CCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 483 IKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 483 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+.+++.+..+.+|...| +++ +|+|||++|++++.||.|+||
T Consensus 313 ~~~~~~~~~l~~h~~~v-----------~~l---~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 313 VLKGSRVSILFGHENRV-----------STL---RVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp TTTCSEEEEECCCSSCE-----------EEE---EECTTSSCEEEEETTSEEEEE
T ss_pred CCCCceEEEEECCCCcE-----------EEE---EECCCCCEEEEEcCCCCEEec
Confidence 99999999999999999 999 999999999999999999999
No 21
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-41 Score=328.98 Aligned_cols=343 Identities=14% Similarity=0.134 Sum_probs=263.9
Q ss_pred cceEEeeeccceehhhh-cCCCcceEEEEEecccc-EEEEEeCCceEEEEec----ccccCcccccccccceeEEeec--
Q psy10942 76 KSLLHYYETSAVKELYQ-HGLSSPLVRIVRSSVKR-MYAVVTADHNISLYRL----NSETGLEERPNKILKFRKQFVG-- 147 (537)
Q Consensus 76 ~~~i~~wd~~~~~~~~~-~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~~~~~-- 147 (537)
...+.+|++........ ..+.+.|.+++|+|+++ +||+++.|+.|++||+ .++... ........+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~ 98 (425)
T 1r5m_A 24 NSIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-----WKLTIIAELRHPF 98 (425)
T ss_dssp ----------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-----EEEEEEEEEECCC
T ss_pred ccccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-----ccccccccccccc
Confidence 34456777765443322 23337999999999999 9999999999999999 763100 00002333333
Q ss_pred --------chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc
Q psy10942 148 --------FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE 218 (537)
Q Consensus 148 --------~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~ 218 (537)
|.+.|.+++|+ +++++|++++.++. | ++||. ...... +.
T Consensus 99 ~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~----i-----------------~i~~~-------~~~~~~~~~--- 146 (425)
T 1r5m_A 99 ALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGE----L-----------------RLWNK-------TGALLNVLN--- 146 (425)
T ss_dssp CCC------CBCEEEEEEC-TTSSEEEEEETTSC----E-----------------EEEET-------TSCEEEEEC---
T ss_pred cccccccCCCCceEEEEEc-CCCCEEEEEeCCCe----E-----------------EEEeC-------CCCeeeecc---
Confidence 67789999999 68888888887776 9 99985 444333 67
Q ss_pred cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccc----------------cceeeeeeC
Q psy10942 219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE----------------AEHGAFYTG 282 (537)
Q Consensus 219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 282 (537)
+| ...|.++ +|+|++++|++++.|+.++ +|++..+........... ...+.....
T Consensus 147 --~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (425)
T 1r5m_A 147 --FH--RAPIVSV---KWNKDGTHIISMDVENVTI--LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD 217 (425)
T ss_dssp --CC--CSCEEEE---EECTTSSEEEEEETTCCEE--EEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred --CC--CccEEEE---EECCCCCEEEEEecCCeEE--EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence 89 9999999 9999999999999999999 999987532221111000 111122222
Q ss_pred CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec
Q psy10942 283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH 362 (537)
Q Consensus 283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 362 (537)
..+++++.++.|++||+.+++. ...+..|...|.+++|+|++++|++++.|+.|++||+. ..+.+..+..|
T Consensus 218 ---~~~~~~~~~g~i~~~d~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~ 288 (425)
T 1r5m_A 218 ---DKFVIPGPKGAIFVYQITEKTP-----TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG-NGNSQNCFYGH 288 (425)
T ss_dssp ---TEEEEECGGGCEEEEETTCSSC-----SEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS-SBSCSEEECCC
T ss_pred ---CEEEEEcCCCeEEEEEcCCCce-----eeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC-CCccceEecCC
Confidence 5789999999999999998765 34456889999999999999999999999999999988 44444443333
Q ss_pred CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942 363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT 442 (537)
Q Consensus 363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (537)
.. .+.+++|+|++ ++++++.|+.|++||+.
T Consensus 289 ~~-------------------------------------------------~i~~~~~~~~~-~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 289 SQ-------------------------------------------------SIVSASWVGDD-KVISCSMDGSVRLWSLK 318 (425)
T ss_dssp SS-------------------------------------------------CEEEEEEETTT-EEEEEETTSEEEEEETT
T ss_pred Cc-------------------------------------------------cEEEEEECCCC-EEEEEeCCCcEEEEECC
Confidence 22 78889999999 99999999999999999
Q ss_pred CceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe--------------------eEEEecCCcc--cee
Q psy10942 443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST--------------------CVSTFDKHAL--KIR 500 (537)
Q Consensus 443 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~--------------------~~~~~~~~~~--~i~ 500 (537)
+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++ .+..+..|.. .|
T Consensus 319 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 397 (425)
T 1r5m_A 319 QNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYI- 397 (425)
T ss_dssp TTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCE-
T ss_pred CCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCce-
Confidence 999999999999999999999999999999999999999999888 8899999976 88
Q ss_pred ccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 501 NSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.++ +|+|++++|++++.||.|++|
T Consensus 398 ----------~~~---~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 398 ----------FDL---SWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp ----------EEE---EECTTSSEEEEEESSSCCEEE
T ss_pred ----------EEE---EccCCCceEEEEecCceEEEE
Confidence 888 999999999999999999998
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=311.30 Aligned_cols=285 Identities=19% Similarity=0.244 Sum_probs=239.0
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh--hhhcCCC-cceEEEEEeccccEEEEEeCCceE
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE--LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNI 120 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i 120 (537)
+.+++.++ .+.|. ...++.++++++.|+.|++||+.+++. ...+.+| ..|.+++|+|++.++++++.|++|
T Consensus 31 H~~~V~~v--~~~~~----~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 31 HDDAIWSV--AWGTN----KKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp SSSCEEEE--EEC-----------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred CCCcEEEE--EEecC----CCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 66778888 45652 111456899999999999999987653 3445555 689999999999999999999999
Q ss_pred EEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHH
Q psy10942 121 SLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFER 200 (537)
Q Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~ 200 (537)
++||+.+ ++.+..+..|...+.+++|+ |++++|++++.++. + ++|++
T Consensus 105 ~lWd~~~-----------~~~~~~~~~~~~~~~~~~~s-pdg~~l~~g~~dg~----v-----------------~i~~~ 151 (321)
T 3ow8_A 105 RLWDLEN-----------GKQIKSIDAGPVDAWTLAFS-PDSQYLATGTHVGK----V-----------------NIFGV 151 (321)
T ss_dssp EEEETTT-----------TEEEEEEECCTTCCCCEEEC-TTSSEEEEECTTSE----E-----------------EEEET
T ss_pred EEEECCC-----------CCEEEEEeCCCccEEEEEEC-CCCCEEEEEcCCCc----E-----------------EEEEc
Confidence 9999998 67888899999999999999 78888888887776 9 99999
Q ss_pred HHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceee
Q psy10942 201 ILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGA 278 (537)
Q Consensus 201 ~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~ 278 (537)
++++.. +. .| ...|.++ +|+|++++|++++.|+.|+ +||+..+
T Consensus 152 -------~~~~~~~~~~-----~~--~~~v~~~---~~spdg~~lasg~~dg~i~--iwd~~~~---------------- 196 (321)
T 3ow8_A 152 -------ESGKKEYSLD-----TR--GKFILSI---AYSPDGKYLASGAIDGIIN--IFDIATG---------------- 196 (321)
T ss_dssp -------TTCSEEEEEE-----CS--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTT----------------
T ss_pred -------CCCceeEEec-----CC--CceEEEE---EECCCCCEEEEEcCCCeEE--EEECCCC----------------
Confidence 766665 66 78 8899999 9999999999999888888 8877652
Q ss_pred eeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE
Q psy10942 279 FYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV 358 (537)
Q Consensus 279 ~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 358 (537)
+. ...+.+|..+|.+++|+|++++|++++.|+.|++||++ .......
T Consensus 197 ---------------------------~~-----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~-~~~~~~~ 243 (321)
T 3ow8_A 197 ---------------------------KL-----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGT 243 (321)
T ss_dssp ---------------------------EE-----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT-TCCEEEE
T ss_pred ---------------------------cE-----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC-CcceeEE
Confidence 11 12235688889999999999999999999999999998 4455554
Q ss_pred EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEE
Q psy10942 359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKL 438 (537)
Q Consensus 359 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 438 (537)
+..|.. .|.+++|+|++++|++++.|+.|++
T Consensus 244 ~~~h~~-------------------------------------------------~v~~~~~sp~~~~l~s~s~D~~v~i 274 (321)
T 3ow8_A 244 LSGHAS-------------------------------------------------WVLNVAFCPDDTHFVSSSSDKSVKV 274 (321)
T ss_dssp ECCCSS-------------------------------------------------CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EcCCCC-------------------------------------------------ceEEEEECCCCCEEEEEeCCCcEEE
Confidence 444433 7889999999999999999999999
Q ss_pred EECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 439 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
||+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||..
T Consensus 275 wd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 275 WDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999963
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-42 Score=331.72 Aligned_cols=348 Identities=13% Similarity=0.145 Sum_probs=262.8
Q ss_pred cccceeeeEeecCccccccCCcEEEEEe----------CccceEEeeecccee---hhhhcCCCcceEEEEEeccccEEE
Q psy10942 46 ESLETCAVFHLSDETESKSGGKTFVLAG----------GEKSLLHYYETSAVK---ELYQHGLSSPLVRIVRSSVKRMYA 112 (537)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~wd~~~~~---~~~~~~~~~~v~~~~~s~~~~~la 112 (537)
+.+..+ .++|. +..+++++ +.|+.|++||+.+++ .+..+.+.+.|.+++|+|++++|+
T Consensus 13 ~~v~~~--~~sp~-------g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 83 (416)
T 2pm9_A 13 SRTATF--AWSHD-------KIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIA 83 (416)
T ss_dssp EESCBC--CBCSS-------SSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEE
T ss_pred hhcceE--eeCCC-------CCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEE
Confidence 345556 56784 44589999 889999999999886 455566668999999999999999
Q ss_pred EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcch
Q psy10942 113 VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNE 192 (537)
Q Consensus 113 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~ 192 (537)
+++.|+.|++||+.+... ..+....+.+|...|.+++|+|.++.++++++.++. |
T Consensus 84 ~~~~dg~v~vw~~~~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~----v-------------- 138 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANN-------AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE----I-------------- 138 (416)
T ss_dssp EEESSSCEEEECCSSTTS-------CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC----E--------------
T ss_pred EEccCCeEEEeecccccc-------cccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe----E--------------
Confidence 999999999999987211 034778889999999999999544788888887776 9
Q ss_pred hhHHHHHHHHHhhhccccc------ccccccccccCCCcCeEEEEeccCcccC-CCeeeeccCCCcceeccccccCCCcc
Q psy10942 193 WFDKTFERILEAKFKQSSS------QQKHNTERLGRDELKTVTLLERGKTVKE-EDLFPRQSMEPSTLEELEKRKTYHFP 265 (537)
Q Consensus 193 ~~~~~wd~~~~~~~~~~~~------~~l~~~~~~~h~~~~~v~~~~~~~~s~~-~~~l~~~~~d~~i~~~iw~~~~~~~~ 265 (537)
++||+ .+.+ ..+......+| ...|.++ +|+|+ +.+|++++.|+.++ +|++....
T Consensus 139 ---~iwd~-------~~~~~~~~~~~~~~~~~~~~~--~~~v~~~---~~~~~~~~~l~~~~~dg~v~--iwd~~~~~-- 199 (416)
T 2pm9_A 139 ---FIWDM-------NKCTESPSNYTPLTPGQSMSS--VDEVISL---AWNQSLAHVFASAGSSNFAS--IWDLKAKK-- 199 (416)
T ss_dssp ---EBCBT-------TTTSSCTTTCCCBCCCCSCCS--SCCCCEE---EECSSCTTEEEEESSSSCEE--EEETTTTE--
T ss_pred ---EEEEC-------CCCccccccccccccccccCC--CCCeeEE---EeCCCCCcEEEEEcCCCCEE--EEECCCCC--
Confidence 99999 6655 22221222378 8999999 99999 68899999999999 99887631
Q ss_pred cccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCC--
Q psy10942 266 LFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDK-- 342 (537)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~-- 342 (537)
.+..+... ....+|...|.+++|+|++ .++++++.|+
T Consensus 200 ------------------------------~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 200 ------------------------------EVIHLSYT----------SPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp ------------------------------EEEEECCC----------CCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred ------------------------------cceEEecc----------ccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 01111111 1113457889999999997 6899999998
Q ss_pred -cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942 343 -TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421 (537)
Q Consensus 343 -~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s 421 (537)
.|++||++....++..+. ..|.. .+.+++|+
T Consensus 240 ~~i~~~d~~~~~~~~~~~~-------------------------------~~~~~-----------------~v~~~~~s 271 (416)
T 2pm9_A 240 PSILIWDLRNANTPLQTLN-------------------------------QGHQK-----------------GILSLDWC 271 (416)
T ss_dssp CCCCEEETTSTTSCSBCCC-------------------------------SCCSS-----------------CEEEEEEC
T ss_pred ceEEEEeCCCCCCCcEEee-------------------------------cCccC-----------------ceeEEEeC
Confidence 999999884323322222 03332 78889999
Q ss_pred C-CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEecC-----
Q psy10942 422 P-LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTFDK----- 494 (537)
Q Consensus 422 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~----- 494 (537)
| ++++|++++.|+.|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.......
T Consensus 272 ~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 351 (416)
T 2pm9_A 272 HQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ 351 (416)
T ss_dssp SSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------
T ss_pred CCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc
Confidence 9 89999999999999999999999999999999999999999998 8999999999999999987654332211
Q ss_pred ---------------CccceeccCC----CCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 495 ---------------HALKIRNSDS----ENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 495 ---------------~~~~i~~~~~----~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
|...+..... .......++ +|+|||++|++++.|+.|+||
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~dg~~la~~~~d~~v~~w 410 (416)
T 2pm9_A 352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAA---HWAFGGKLVQITPDGKGVSIT 410 (416)
T ss_dssp ---------------CCSCCCSSCCCCCSTTCCCSCCC---EEETTTEEECBCTTSSCBCCB
T ss_pred cCCcccccccccccccccccccccccCCccccCCccce---EEeeCCeEEEEeCCCCeEEEE
Confidence 1111100000 001111466 999999999999999999999
No 24
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.7e-40 Score=349.26 Aligned_cols=398 Identities=13% Similarity=0.154 Sum_probs=307.0
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL 122 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i 122 (537)
+...+.++ .++| +++++++++.+|.|++||+.+++.+..+..+ +.|.+++|+|++++||+++.|+.|++
T Consensus 12 h~~~v~~i--~~sp--------~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 12 RSDRVKGI--DFHP--------TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp ECSCEEEE--EECS--------SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred CCCceEEE--EECC--------CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 55667777 6688 6789999999999999999999988888755 69999999999999999999999999
Q ss_pred EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942 123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL 202 (537)
Q Consensus 123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~ 202 (537)
||+.+ ++.+..+.+|.+.|.+++|+ +++..|++++.++. | ++||+
T Consensus 82 w~~~~-----------~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~----i-----------------~vw~~-- 126 (814)
T 3mkq_A 82 FNYNT-----------GEKVVDFEAHPDYIRSIAVH-PTKPYVLSGSDDLT----V-----------------KLWNW-- 126 (814)
T ss_dssp EETTT-----------CCEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSE----E-----------------EEEEG--
T ss_pred EECCC-----------CcEEEEEecCCCCEEEEEEe-CCCCEEEEEcCCCE----E-----------------EEEEC--
Confidence 99998 68888999999999999999 78888888887776 9 99998
Q ss_pred Hhhhcccc-ccc--ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccc--cccce
Q psy10942 203 EAKFKQSS-SQQ--KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEH 276 (537)
Q Consensus 203 ~~~~~~~~-~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~ 276 (537)
.+. ... +. +| ...|.++ +|+| +++.+++++.||.++ +|++............ .....
T Consensus 127 -----~~~~~~~~~~~-----~~--~~~v~~~---~~~p~~~~~l~~~~~dg~v~--vwd~~~~~~~~~~~~~~~~~v~~ 189 (814)
T 3mkq_A 127 -----ENNWALEQTFE-----GH--EHFVMCV---AFNPKDPSTFASGCLDRTVK--VWSLGQSTPNFTLTTGQERGVNY 189 (814)
T ss_dssp -----GGTSEEEEEEE-----CC--SSCEEEE---EEETTEEEEEEEEETTSEEE--EEETTCSSCSEEEECCCTTCCCE
T ss_pred -----CCCceEEEEEc-----CC--CCcEEEE---EEEcCCCCEEEEEeCCCeEE--EEECCCCcceeEEecCCCCCEEE
Confidence 665 322 66 89 9999999 9999 889999999999999 9999775432221111 12223
Q ss_pred eeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee
Q psy10942 277 GAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL 356 (537)
Q Consensus 277 ~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~ 356 (537)
+..+....-..+++++.||.|++||+.+++. ...+..|...|.+++|+|+++++++++.||.|++||+. ..+.+
T Consensus 190 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~-~~~~~ 263 (814)
T 3mkq_A 190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSC-----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS-TYKVE 263 (814)
T ss_dssp EEECCSTTCCEEEEECTTSEEEEEETTTTEE-----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TCSEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCcE-----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCcEE
Confidence 3333311226899999999999999998875 34456789999999999999999999999999999998 44444
Q ss_pred EEE----------EecCCCCE-EEEEcCCCcEEEEECCCCeeeeeeccCCcceEE------------EEEe-----cCCC
Q psy10942 357 NVL----------RGHKKGTQ-IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT------------LAIT-----KDEN 408 (537)
Q Consensus 357 ~~~----------~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~------------~~~~-----~~~~ 408 (537)
..+ ..++++.. +++.+.++.+.+|++........+......+.. .... ..+.
T Consensus 264 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (814)
T 3mkq_A 264 KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDE 343 (814)
T ss_dssp EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSS
T ss_pred EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCc
Confidence 443 44555543 355556777899998766544433322111110 0000 0000
Q ss_pred ce---------EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942 409 QI---------ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479 (537)
Q Consensus 409 ~~---------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 479 (537)
.+ ....+.+++|+|+|+++++++ ++.+.+|++...... +.+.+.+++|+|+++++++++.+|.|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~v~ 417 (814)
T 3mkq_A 344 PLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQIK 417 (814)
T ss_dssp CBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCCEE
T ss_pred cceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCcEE
Confidence 00 011478999999999999998 899999998764432 346788999999999999999999999
Q ss_pred EEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCC---CEEEEEeCCCCEEeC
Q psy10942 480 LWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNS---DCEYRGGWSPQVVVY 537 (537)
Q Consensus 480 vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~---~~l~s~~~dg~i~vW 537 (537)
+|+ .+.+|...+ ..+ +|+|++ ++|++++.|+.|++|
T Consensus 418 l~~--------~~~~~~~~v-----------~~~---~~s~dg~~~~~l~~~~~d~~v~~~ 456 (814)
T 3mkq_A 418 YYK--------NFKEVTSWS-----------VPM---HSAIDRLFSGALLGVKSDGFVYFF 456 (814)
T ss_dssp EEE--------TTEECTTCC-----------CCC---SSCCCEEECSSSEEEEETTEEEEE
T ss_pred EEE--------CCCCccceE-----------EcC---CcCccceecceEEEEecCCEEEEE
Confidence 996 334567777 888 999999 688999999999998
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-41 Score=323.03 Aligned_cols=324 Identities=14% Similarity=0.174 Sum_probs=257.4
Q ss_pred cceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEE
Q psy10942 25 DKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRI 102 (537)
Q Consensus 25 ~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~ 102 (537)
+..+..|+.......+.+. +..++.++ .+.| ++++|++++.|+.|++||+.+++.+..+..| ..|.++
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~--~~sp--------~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~ 114 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSGKVYSL--DWTP--------EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMEC 114 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSSCEEEE--EECT--------TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCC
T ss_pred cccccccccceeEEeecccccccEEEEE--EEcC--------CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEE
Confidence 3445567777777777776 56677877 5688 6689999999999999999999988888766 689999
Q ss_pred EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCccccee
Q psy10942 103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLV 182 (537)
Q Consensus 103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~ 182 (537)
+|+|+|++||+++.|+.+++||+.+... ........+.+.+|.+.|.+++|.|.++..|++++.++. |
T Consensus 115 ~~s~~g~~las~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~----i---- 182 (380)
T 3iz6_a 115 AFAPNGQSVACGGLDSACSIFNLSSQAD----RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT----C---- 182 (380)
T ss_dssp EECTTSSEEEECCSSSCCEEEECCCCSS----CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC----E----
T ss_pred EECCCCCEEEEeeCCCcEEEEECCCCcc----ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc----E----
Confidence 9999999999999999999999976311 111134556788999999999999666777888888777 9
Q ss_pred ecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccc
Q psy10942 183 KLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKR 259 (537)
Q Consensus 183 ~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~ 259 (537)
++||+ .+++.. +......+| ...|.++ +|++ ++++|++|+.|+.|+ +||+
T Consensus 183 -------------~~wd~-------~~~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~~l~sgs~D~~v~--~wd~ 235 (380)
T 3iz6_a 183 -------------VLWDV-------TTGQRISIFGSEFPSGH--TADVLSL---SINSLNANMFISGSCDTTVR--LWDL 235 (380)
T ss_dssp -------------EEECT-------TTCCEEEEECCCSSSSC--CSCEEEE---EECSSSCCEEEEEETTSCEE--EEET
T ss_pred -------------EEEEc-------CCCcEEEEeecccCCCC--ccCeEEE---EeecCCCCEEEEEECCCeEE--EEEC
Confidence 99999 777665 322222488 8999999 8876 778888888888888 7777
Q ss_pred cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe
Q psy10942 260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS 339 (537)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 339 (537)
.... .. ...+.+|...|.+++|+|++++|++++
T Consensus 236 ~~~~------------------------------------------~~-----~~~~~~h~~~v~~v~~~p~~~~l~s~s 268 (380)
T 3iz6_a 236 RITS------------------------------------------RA-----VRTYHGHEGDINSVKFFPDGQRFGTGS 268 (380)
T ss_dssp TTTC------------------------------------------CC-----CEEECCCSSCCCEEEECTTSSEEEEEC
T ss_pred CCCC------------------------------------------cc-----eEEECCcCCCeEEEEEecCCCeEEEEc
Confidence 5410 11 223467889999999999999999999
Q ss_pred CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942 340 LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN 419 (537)
Q Consensus 340 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~ 419 (537)
.|++|++||++ ....+..+..++.. ...+. ..+.+++
T Consensus 269 ~D~~i~lwd~~-~~~~~~~~~~~~~~-------------------------~~~~~-----------------~~v~~~~ 305 (380)
T 3iz6_a 269 DDGTCRLFDMR-TGHQLQVYNREPDR-------------------------NDNEL-----------------PIVTSVA 305 (380)
T ss_dssp SSSCEEEEETT-TTEEEEEECCCCSS-------------------------SCCSS-----------------CSCSEEE
T ss_pred CCCeEEEEECC-CCcEEEEecccccc-------------------------ccccc-----------------CceEEEE
Confidence 99999999999 55555554433220 00000 0578899
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCceeeeEe----ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 420 FSPLDRILISSSGDATIKLWCLTDYVCLKSL----EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
|+|++++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++++|++|+.|++|++|++...+
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 9999999999999999999999998888777 6799999999999999999999999999999987653
No 26
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.5e-40 Score=310.04 Aligned_cols=288 Identities=20% Similarity=0.285 Sum_probs=239.9
Q ss_pred eeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942 40 RSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTAD 117 (537)
Q Consensus 40 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d 117 (537)
..+. +..++.++ .+.| +++++++++.||.|++||+.+++.+..+..+ ..|.+++|+|++++||+++.|
T Consensus 49 ~~l~gH~~~v~~~--~~s~--------d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 49 RTLRGHLAKIYAM--HWGT--------DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp EEECCCSSCEEEE--EECT--------TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred eeecCCCCceEEE--EECC--------CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence 3444 55677777 5577 6789999999999999999999888877755 589999999999999999999
Q ss_pred ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942 118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT 197 (537)
Q Consensus 118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (537)
+.|++|++.+... .......+.+|.+.|.++.|+ +++ .+++++.++. | ++
T Consensus 119 ~~v~iw~~~~~~~-------~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~d~~----i-----------------~~ 168 (340)
T 1got_B 119 NICSIYNLKTREG-------NVRVSRELAGHTGYLSCCRFL-DDN-QIVTSSGDTT----C-----------------AL 168 (340)
T ss_dssp CEEEEEETTTCSB-------SCEEEEEEECCSSCEEEEEEE-ETT-EEEEEETTSC----E-----------------EE
T ss_pred CeEEEEECccCCC-------cceeEEEecCCCccEEEEEEC-CCC-cEEEEECCCc----E-----------------EE
Confidence 9999999987311 134567888999999999998 444 4777777766 9 99
Q ss_pred HHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccc
Q psy10942 198 FERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE 275 (537)
Q Consensus 198 wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~ 275 (537)
||+ ++++.. +. +| ...|.++ +|+|+++++++++.|+.++ +||+..+
T Consensus 169 wd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~l~sg~~d~~v~--~wd~~~~------------- 216 (340)
T 1got_B 169 WDI-------ETGQQTTTFT-----GH--TGDVMSL---SLAPDTRLFVSGACDASAK--LWDVREG------------- 216 (340)
T ss_dssp EET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTC-------------
T ss_pred EEC-------CCCcEEEEEc-----CC--CCceEEE---EECCCCCEEEEEeCCCcEE--EEECCCC-------------
Confidence 999 777766 66 99 9999999 9999999999999998888 8887652
Q ss_pred eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL 355 (537)
Q Consensus 276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~ 355 (537)
.. ...+.+|...|.+++|+|++++|++++.|+.|++||++ ..+.
T Consensus 217 ------------------------------~~-----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~-~~~~ 260 (340)
T 1got_B 217 ------------------------------MC-----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR-ADQE 260 (340)
T ss_dssp ------------------------------SE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEE
T ss_pred ------------------------------ee-----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC-CCcE
Confidence 11 12235688899999999999999999999999999998 4443
Q ss_pred eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942 356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT 435 (537)
Q Consensus 356 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (537)
+..+..+. +.. .+.+++|+|++++|++|+.|+.
T Consensus 261 ~~~~~~~~------------------------------~~~-----------------~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 261 LMTYSHDN------------------------------IIC-----------------GITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp EEEECCTT------------------------------CCS-----------------CEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEccCC------------------------------ccc-----------------ceEEEEECCCCCEEEEECCCCe
Confidence 33322110 000 6889999999999999999999
Q ss_pred EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942 436 IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482 (537)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd 482 (537)
|++||+.+++.+..+.+|.+.|.+++|+|++.+|++++.|+.|++||
T Consensus 294 i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 294 CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999996
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-40 Score=319.89 Aligned_cols=317 Identities=12% Similarity=0.085 Sum_probs=261.9
Q ss_pred eeeeeeeeeccCCcc-eEEEecCcceEEEEEc----Cccc------eeeeecc-----------ccccceeeeEeecCcc
Q psy10942 3 FCVTCFDVIPQITSE-FSVHCGRDKVLFTWDL----SSRK------QLRSYPA-----------YESLETCAVFHLSDET 60 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~-~l~s~~~~g~v~iwd~----~~~~------~~~~~~~-----------~~~~~~~~~~~~~~~~ 60 (537)
..|+|++|+ |+++ +|++++.||.|++||+ .+++ ....+.. ...+..+ .+.|
T Consensus 46 ~~v~~~~~s--~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~--- 118 (425)
T 1r5m_A 46 DNIVSSTWN--PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL--AWSH--- 118 (425)
T ss_dssp SCCSEEEEC--SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE--EECT---
T ss_pred CceEEEEEC--CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE--EEcC---
Confidence 468999999 8888 9999999999999999 8888 4444443 3356666 5677
Q ss_pred ccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942 61 ESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL 139 (537)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~ 139 (537)
++.+|++++.+|.|++|| .+++.+..+..+ ..|.+++|+|++++|++++.|+.|++||+.+ .
T Consensus 119 -----~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----------~ 181 (425)
T 1r5m_A 119 -----DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS-----------G 181 (425)
T ss_dssp -----TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT-----------T
T ss_pred -----CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC-----------C
Confidence 668999999999999999 667777777754 6999999999999999999999999999998 6
Q ss_pred ceeEEeecchhh---------------hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHh
Q psy10942 140 KFRKQFVGFSDE---------------ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEA 204 (537)
Q Consensus 140 ~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~ 204 (537)
+....+..+... +.+++|+| + ..+++++.++. | ++||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~----i-----------------~~~d~---- 234 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGA----I-----------------FVYQI---- 234 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGC----E-----------------EEEET----
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCe----E-----------------EEEEc----
Confidence 777888877776 99999984 4 45777777766 9 99999
Q ss_pred hhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC
Q psy10942 205 KFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG 282 (537)
Q Consensus 205 ~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (537)
.+.+.. +. +| ...|.++ +|+|++++|++++.|+.++ +|++....
T Consensus 235 ---~~~~~~~~~~-----~~--~~~i~~~---~~~~~~~~l~~~~~d~~i~--i~d~~~~~------------------- 280 (425)
T 1r5m_A 235 ---TEKTPTGKLI-----GH--HGPISVL---EFNDTNKLLLSASDDGTLR--IWHGGNGN------------------- 280 (425)
T ss_dssp ---TCSSCSEEEC-----CC--SSCEEEE---EEETTTTEEEEEETTSCEE--EECSSSBS-------------------
T ss_pred ---CCCceeeeec-----cC--CCceEEE---EECCCCCEEEEEcCCCEEE--EEECCCCc-------------------
Confidence 766655 66 89 9999999 9999999999999999999 88877621
Q ss_pred CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec
Q psy10942 283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH 362 (537)
Q Consensus 283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 362 (537)
. ...+..|...|.+++|+|++ ++++++.|+.|++||+. ..+.+..+..|
T Consensus 281 ------------------------~-----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~~~~~~~~~~ 329 (425)
T 1r5m_A 281 ------------------------S-----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLK-QNTLLALSIVD 329 (425)
T ss_dssp ------------------------C-----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETT-TTEEEEEEECT
T ss_pred ------------------------c-----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECC-CCcEeEecccC
Confidence 1 12234577889999999999 99999999999999998 55555555544
Q ss_pred CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942 363 KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT 442 (537)
Q Consensus 363 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (537)
.. .+.+++|+|++++|++++.||.|++||+.
T Consensus 330 ~~-------------------------------------------------~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 330 GV-------------------------------------------------PIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp TC-------------------------------------------------CEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred Cc-------------------------------------------------cEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 33 78899999999999999999999999999
Q ss_pred Cce--------------------eeeEeecCCc--ceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 443 DYV--------------------CLKSLEGHDA--SVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 443 ~~~--------------------~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
+++ ++..+.+|.. .|++++|+|++++|++++.||.|++|+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 361 KLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp HHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 888 8899999976 99999999999999999999999999985
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=310.81 Aligned_cols=289 Identities=16% Similarity=0.195 Sum_probs=231.9
Q ss_pred ehhhhcCCC-c-ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccce--e-EEeecchhhhhhhhcccCCC
Q psy10942 88 KELYQHGLS-S-PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKF--R-KQFVGFSDEILDIALLGEED 162 (537)
Q Consensus 88 ~~~~~~~~~-~-~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~-~~~~~~~~~v~~~~~~~~~~ 162 (537)
+++.++..| + .|.+++|+|+|++||+++.|++|+|||+.+ ... . ....+|...|.+++|+ |++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~-----------~~~~~~~~~~~~h~~~v~~~~~s-p~g 73 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEG-----------DSWICKSVLSEGHQRTVRKVAWS-PCG 73 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEET-----------TEEEEEEEECSSCSSCEEEEEEC-TTS
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCC-----------CcceeeeeeccccCCcEEEEEEC-CCC
Confidence 344555555 4 899999999999999999999999999987 332 1 2336899999999999 788
Q ss_pred ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc--cc--ccccccccCCCcCeEEEEeccCccc
Q psy10942 163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS--QQ--KHNTERLGRDELKTVTLLERGKTVK 238 (537)
Q Consensus 163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~--l~~~~~~~h~~~~~v~~~~~~~~s~ 238 (537)
++|++++.++. + ++|+. .... +. +. +| ...|.++ +|+|
T Consensus 74 ~~l~s~s~D~~----v-----------------~iw~~-------~~~~~~~~~~~~-----~h--~~~v~~v---~~sp 115 (345)
T 3fm0_A 74 NYLASASFDAT----T-----------------CIWKK-------NQDDFECVTTLE-----GH--ENEVKSV---AWAP 115 (345)
T ss_dssp SEEEEEETTSC----E-----------------EEEEE-------CCC-EEEEEEEC-----CC--SSCEEEE---EECT
T ss_pred CEEEEEECCCc----E-----------------EEEEc-------cCCCeEEEEEcc-----CC--CCCceEE---EEeC
Confidence 89998888877 9 99988 5543 22 66 99 9999999 9999
Q ss_pred CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG 318 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 318 (537)
++++|++++.|+.++ +|++..... .. . ...+..
T Consensus 116 ~~~~l~s~s~D~~v~--iwd~~~~~~--------------------------------~~--------~-----~~~~~~ 148 (345)
T 3fm0_A 116 SGNLLATCSRDKSVW--VWEVDEEDE--------------------------------YE--------C-----VSVLNS 148 (345)
T ss_dssp TSSEEEEEETTSCEE--EEEECTTSC--------------------------------EE--------E-----EEEECC
T ss_pred CCCEEEEEECCCeEE--EEECCCCCC--------------------------------eE--------E-----EEEecC
Confidence 999999999999999 999876310 00 0 122456
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce--eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK--LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396 (537)
Q Consensus 319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 396 (537)
|...|.+++|+|++++|++++.|+.|++||.. ... ....+. +|..
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~~~~~--------------------------------~h~~ 195 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREE-EDDWVCCATLE--------------------------------GHES 195 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEEEEEC--------------------------------CCSS
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEEEEec--------------------------------CCCC
Confidence 88899999999999999999999999999987 332 122233 3332
Q ss_pred ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---------------ceeeeEeec-CCcceEEE
Q psy10942 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---------------YVCLKSLEG-HDASVLRC 460 (537)
Q Consensus 397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------------~~~~~~~~~-~~~~v~~~ 460 (537)
.|.+++|+|++++|++++.|+.|++||... .+++..+.+ |...|.++
T Consensus 196 -----------------~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 258 (345)
T 3fm0_A 196 -----------------TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDI 258 (345)
T ss_dssp -----------------CEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEE
T ss_pred -----------------ceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEE
Confidence 788999999999999999999999999632 234445555 88899999
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCe---------eEEEecCCccceeccCCCCCCccccccceeeecCCC-EEEEEeC
Q psy10942 461 HFINKGTQIVSTGADGLLKLWSIKTST---------CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD-CEYRGGW 530 (537)
Q Consensus 461 ~~s~~~~~l~s~~~dg~v~vwd~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~-~l~s~~~ 530 (537)
+|+|++..|++++.|+.|++|+...+. ......+|...| .++ +|+|++. +||+++.
T Consensus 259 ~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V-----------~~v---~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 259 AWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDV-----------NCV---AWNPKEPGLLASCSD 324 (345)
T ss_dssp EECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCE-----------EEE---EECSSSTTEEEEEET
T ss_pred EEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcE-----------eEe---EEeCCCceEEEEcCC
Confidence 999999999999999999999986542 122346888889 899 9999984 9999999
Q ss_pred CCCEEeC
Q psy10942 531 SPQVVVY 537 (537)
Q Consensus 531 dg~i~vW 537 (537)
||.|++|
T Consensus 325 Dg~v~~W 331 (345)
T 3fm0_A 325 DGEVAFW 331 (345)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9999999
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.9e-40 Score=302.96 Aligned_cols=286 Identities=17% Similarity=0.202 Sum_probs=230.0
Q ss_pred hhhcCCC-cceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942 90 LYQHGLS-SPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV 167 (537)
Q Consensus 90 ~~~~~~~-~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 167 (537)
..++.+| +.|.+++|+|++ ++|++++.|++|++|++.+.. ......+..+.+|...|.+++|+ +++.++++
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~------~~~~~~~~~~~~h~~~v~~~~~s-~dg~~l~s 82 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDD------QKFGVPVRSFKGHSHIVQDCTLT-ADGAYALS 82 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEET------TEEEEEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCC------ccccccceEEeCCcccEEEEEEC-CCCCEEEE
Confidence 3445555 689999999965 799999999999999997621 11134567899999999999999 78889999
Q ss_pred eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942 168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPR 245 (537)
Q Consensus 168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~ 245 (537)
++.++. | ++||+ .+++.. +. +| ...|.++ +|+|++++|++
T Consensus 83 ~s~D~~----v-----------------~~wd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~l~s 124 (319)
T 3frx_A 83 ASWDKT----L-----------------RLWDV-------ATGETYQRFV-----GH--KSDVMSV---DIDKKASMIIS 124 (319)
T ss_dssp EETTSE----E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE---EECTTSCEEEE
T ss_pred EeCCCE----E-----------------EEEEC-------CCCCeeEEEc-----cC--CCcEEEE---EEcCCCCEEEE
Confidence 888877 9 99999 877766 77 99 9999999 99999999999
Q ss_pred ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC 325 (537)
Q Consensus 246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~ 325 (537)
++.|+.++ +|++... . ...+.+|...|.+
T Consensus 125 ~s~D~~i~--vwd~~~~--------------------------------------------~-----~~~~~~h~~~v~~ 153 (319)
T 3frx_A 125 GSRDKTIK--VWTIKGQ--------------------------------------------C-----LATLLGHNDWVSQ 153 (319)
T ss_dssp EETTSCEE--EEETTSC--------------------------------------------E-----EEEECCCSSCEEE
T ss_pred EeCCCeEE--EEECCCC--------------------------------------------e-----EEEEeccCCcEEE
Confidence 99999998 8887541 0 1123467888999
Q ss_pred EEEcCCC------CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942 326 VTVSPND------KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399 (537)
Q Consensus 326 ~~~s~~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 399 (537)
++|+|.+ ..+++++.|+.|++||++ ..+ ....+.+|..
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~--------------------------------~~~~~~~h~~--- 197 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN-QFQ--------------------------------IEADFIGHNS--- 197 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETT-TTE--------------------------------EEEEECCCCS---
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECC-cch--------------------------------hheeecCCCC---
Confidence 9999854 356666666666666665 333 3333444443
Q ss_pred EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942 400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479 (537)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 479 (537)
.|.+++|+|++++|++++.||.|++||+.+++.+..+..+ ..|.+++|+|++.+|++++.+ .++
T Consensus 198 --------------~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~ 261 (319)
T 3frx_A 198 --------------NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIK 261 (319)
T ss_dssp --------------CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEE
T ss_pred --------------cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcE
Confidence 7888999999999999999999999999999999998854 679999999999999988765 499
Q ss_pred EEECCCCeeEEEecCC--------ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 480 LWSIKTSTCVSTFDKH--------ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 480 vwd~~~~~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+|++..+..+..+..+ ...+ .++ +|+|||++|++++.||.|+||
T Consensus 262 v~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 262 VFSLDPQYLVDDLRPEFAGYSKAAEPHA-----------VSL---AWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp EEEETTEEEEEEECCCCTTCCGGGCCCE-----------EEE---EECTTSSEEEEEETTSCEEEE
T ss_pred EEEeCcCeeeeccCccccccccCcCcce-----------eEE---EECCCCCEEEEeecCceEEEE
Confidence 9999888877776543 3344 677 999999999999999999999
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.5e-40 Score=303.19 Aligned_cols=284 Identities=22% Similarity=0.309 Sum_probs=240.5
Q ss_pred hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942 91 YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 91 ~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
..+..| +.|.+++|+|++++||+++.|+.|++|+..+ .+....+.+|...|.+++|+ +++++|++++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~ 84 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----------GKFEKTISGHKLGISDVAWS-SDSNLLVSAS 84 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------CCEEEEECCCSSCEEEEEEC-TTSSEEEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-----------cccchhhccCCCceEEEEEc-CCCCEEEEEC
Confidence 334444 6899999999999999999999999999988 67788899999999999999 7888888888
Q ss_pred eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeecc
Q psy10942 170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS 247 (537)
Q Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~ 247 (537)
.++. | ++||+ +++++. +. +| ...|.++ +|+|++++|++++
T Consensus 85 ~d~~----i-----------------~vwd~-------~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~s~~ 126 (312)
T 4ery_A 85 DDKT----L-----------------KIWDV-------SSGKCLKTLK-----GH--SNYVFCC---NFNPQSNLIVSGS 126 (312)
T ss_dssp TTSE----E-----------------EEEET-------TTCCEEEEEE-----CC--SSCEEEE---EECSSSSEEEEEE
T ss_pred CCCE----E-----------------EEEEC-------CCCcEEEEEc-----CC--CCCEEEE---EEcCCCCEEEEEe
Confidence 8777 9 99999 777766 67 89 9999999 9999999999999
Q ss_pred CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942 248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT 327 (537)
Q Consensus 248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 327 (537)
.|+.++ +|++..+ +. ...+..|..+|.+++
T Consensus 127 ~d~~i~--iwd~~~~-------------------------------------------~~-----~~~~~~~~~~v~~~~ 156 (312)
T 4ery_A 127 FDESVR--IWDVKTG-------------------------------------------KC-----LKTLPAHSDPVSAVH 156 (312)
T ss_dssp TTSCEE--EEETTTC-------------------------------------------CE-----EEEECCCSSCEEEEE
T ss_pred CCCcEE--EEECCCC-------------------------------------------EE-----EEEecCCCCcEEEEE
Confidence 888888 8887652 11 112346778899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942 328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407 (537)
Q Consensus 328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 407 (537)
|+|++++|++++.|+.|++||+. ..+.+..+..+ +..
T Consensus 157 ~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~-------------------------------~~~----------- 193 (312)
T 4ery_A 157 FNRDGSLIVSSSYDGLCRIWDTA-SGQCLKTLIDD-------------------------------DNP----------- 193 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT-TCCEEEEECCS-------------------------------SCC-----------
T ss_pred EcCCCCEEEEEeCCCcEEEEECC-CCceeeEEecc-------------------------------CCC-----------
Confidence 99999999999999999999998 43333322111 111
Q ss_pred CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEE--EEEe-cCCCEEEEEeCCCcEEEEECC
Q psy10942 408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR--CHFI-NKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~s-~~~~~l~s~~~dg~v~vwd~~ 484 (537)
.+..++|+|++++|++++.|+.|++||+.+++.+..+.+|...+.. ..++ +++.+|++++.||.|++||+.
T Consensus 194 ------~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 194 ------PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp ------CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred ------ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 6788999999999999999999999999999999999988765432 3344 678899999999999999999
Q ss_pred CCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe--CCCCEEeC
Q psy10942 485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG--WSPQVVVY 537 (537)
Q Consensus 485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~--~dg~i~vW 537 (537)
+++.+..+.+|...| .++ +|+|++++|++++ .|+.|++|
T Consensus 268 ~~~~~~~~~~h~~~v-----------~~~---~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 268 TKEIVQKLQGHTDVV-----------IST---ACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp TCCEEEEECCCSSCE-----------EEE---EECSSSSEEEEEECTTTCCEEEE
T ss_pred CchhhhhhhccCCcE-----------EEE---eecCcCCceEEEEccCCccEEEe
Confidence 999999999999999 999 9999999999987 69999999
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.1e-40 Score=316.94 Aligned_cols=347 Identities=12% Similarity=0.120 Sum_probs=269.4
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET 84 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~ 84 (537)
+++++|+ |++++|++++.||.|++||+.+++....+... .+..+. .+.| ++.++++++.|+.|++||+
T Consensus 59 ~~~~~~s--~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~-~~~~--------~~~~l~~~~~dg~i~iwd~ 126 (420)
T 3vl1_A 59 GKGNTFE--KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVD-TAKL--------QMRRFILGTTEGDIKVLDS 126 (420)
T ss_dssp CTTCEEE--EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEE-EECS--------SSCEEEEEETTSCEEEECT
T ss_pred ccceeee--ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEE-EEec--------CCCEEEEEECCCCEEEEeC
Confidence 5689999 89999999999999999999998877766544 222221 2344 6789999999999999999
Q ss_pred cceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc
Q psy10942 85 SAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS 163 (537)
Q Consensus 85 ~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (537)
.+++.+..+..| +.|.+++|+|++++|++++.|+.|++||+.+ .+.+..+.+|...|.+++|+ ++++
T Consensus 127 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~ 194 (420)
T 3vl1_A 127 NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD-----------GSNPRTLIGHRATVTDIAII-DRGR 194 (420)
T ss_dssp TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCCCEEEECCSSCEEEEEEE-TTTT
T ss_pred CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC-----------CcCceEEcCCCCcEEEEEEc-CCCC
Confidence 999988887544 7999999999999999999999999999998 67788899999999999999 7788
Q ss_pred cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942 164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLF 243 (537)
Q Consensus 164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l 243 (537)
.|++++.++. | ++||+ .+++..........| ...+.++ ++.|++...
T Consensus 195 ~l~s~~~d~~----v-----------------~iwd~-------~~~~~~~~~~~~~~~--~~~v~~~---~~~~~~~~~ 241 (420)
T 3vl1_A 195 NVLSASLDGT----I-----------------RLWEC-------GTGTTIHTFNRKENP--HDGVNSI---ALFVGTDRQ 241 (420)
T ss_dssp EEEEEETTSC----E-----------------EEEET-------TTTEEEEEECBTTBT--TCCEEEE---EEEECCCSS
T ss_pred EEEEEcCCCc----E-----------------EEeEC-------CCCceeEEeecCCCC--CCCccEE---EEecCCcce
Confidence 8888887777 9 99999 777665221122246 7888998 887776544
Q ss_pred eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942 244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI 323 (537)
Q Consensus 244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v 323 (537)
+.......+. .+..+... ..+++++.||.|++||+.+++..... ...|...|
T Consensus 242 ~~~~~~~~v~----------------------~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~v 293 (420)
T 3vl1_A 242 LHEISTSKKN----------------------NLEFGTYG--KYVIAGHVSGVITVHNVFSKEQTIQL----PSKFTCSC 293 (420)
T ss_dssp CGGGCCCCCC----------------------TTCSSCTT--EEEEEEETTSCEEEEETTTCCEEEEE----CCTTSSCE
T ss_pred eeecccCccc----------------------ceEEcCCC--CEEEEEcCCCeEEEEECCCCceeEEc----ccccCCCc
Confidence 3222222221 11111111 57899999999999999988764332 34688899
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942 324 NCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA 402 (537)
Q Consensus 324 ~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 402 (537)
.+++|+|+++ +|++++.||.|++||++....++..+..+.. .
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-------------------------------~------ 336 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG-------------------------------T------ 336 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT-------------------------------S------
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC-------------------------------C------
Confidence 9999999999 9999999999999999854454555554322 1
Q ss_pred EecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---------eeeeEeecCCcceEEEEEecCCC---EEE
Q psy10942 403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY---------VCLKSLEGHDASVLRCHFINKGT---QIV 470 (537)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~s~~~~---~l~ 470 (537)
.+.++.+ +++++|++++.|+.|++|++... .....+..|.+.|.+++|+|+++ .|+
T Consensus 337 -----------~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~ 404 (420)
T 3vl1_A 337 -----------PINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVL 404 (420)
T ss_dssp -----------CEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEE
T ss_pred -----------CceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEE
Confidence 5566644 57789999999999999998763 22334567888999999999999 788
Q ss_pred EEeCCCcEEEEECCC
Q psy10942 471 STGADGLLKLWSIKT 485 (537)
Q Consensus 471 s~~~dg~v~vwd~~~ 485 (537)
+++.+|.+.+|++++
T Consensus 405 a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 405 EVGKNNFCALYNLSN 419 (420)
T ss_dssp EEETTTEEEEEESCC
T ss_pred EEcCCceEEEEeccC
Confidence 888899999999864
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=308.08 Aligned_cols=301 Identities=16% Similarity=0.117 Sum_probs=220.3
Q ss_pred EEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcc
Q psy10942 79 LHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALL 158 (537)
Q Consensus 79 i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (537)
.+.|++...... .....|.+++|+|||++|++++ |+++++||.....-.................|...|.+++|+
T Consensus 16 ~r~w~~~~~~~~---~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 91 (344)
T 4gqb_B 16 AREWNLPPNAPA---CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV 91 (344)
T ss_dssp -------CCSCS---SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE
T ss_pred ccccCCCCCCcc---cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe
Confidence 466776554322 2335799999999999998877 667888874320000000000012222333456679999999
Q ss_pred cCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc
Q psy10942 159 GEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV 237 (537)
Q Consensus 159 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s 237 (537)
| + +.+++++.++. | ++||+ .+++.. .......+| ...|.++ +|+
T Consensus 92 ~-d-~~l~~~s~dg~----v-----------------~lWd~-------~~~~~~~~~~~~~~~H--~~~V~~v---~~s 136 (344)
T 4gqb_B 92 G-E-RGILVASDSGA----V-----------------ELWEL-------DENETLIVSKFCKYEH--DDIVSTV---SVL 136 (344)
T ss_dssp T-T-TEEEEEETTSE----E-----------------EEEEE-------CTTSSCEEEEEEEECC--SSCEEEE---EEC
T ss_pred C-C-CeEEEEECCCE----E-----------------EEEec-------cCCCceeEeeccccCC--CCCEEEE---EEC
Confidence 4 4 56778877776 9 99999 777655 222233489 9999999 999
Q ss_pred cCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccc
Q psy10942 238 KEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK 317 (537)
Q Consensus 238 ~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 317 (537)
|+|++|++|+.|+.|+ +|++.++ +. ...+.
T Consensus 137 pdg~~l~sgs~d~~i~--iwd~~~~-------------------------------------------~~-----~~~~~ 166 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIK--VWDLAQQ-------------------------------------------VV-----LSSYR 166 (344)
T ss_dssp TTSSEEEEEETTSCEE--EEETTTT-------------------------------------------EE-----EEEEC
T ss_pred CCCCEEEEEeCCCeEE--EEECCCC-------------------------------------------cE-----EEEEc
Confidence 9999999999988888 8877652 11 22346
Q ss_pred ccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCcee------------eEEEEecC-CCCEEEEEcCCCcEEEEECC
Q psy10942 318 GHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKL------------LNVLRGHK-KGTQIVSTGADGLLKLWSIK 383 (537)
Q Consensus 318 ~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~------------~~~~~~~~-~~~~l~~~~~d~~i~i~d~~ 383 (537)
+|...|.+++|+|++ .+|++++.|+.|++||++. .+. +..+..++ ++.++++++.|++|++||++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 789999999999988 4789999999999999983 332 23344454 46788999999999999999
Q ss_pred CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942 384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF 462 (537)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 462 (537)
+++++..+..|.. .|.+++|+|++ ++|++|+.|++|++||+.+++++ .+.+|.+.|++++|
T Consensus 246 ~~~~~~~~~~h~~-----------------~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~ 307 (344)
T 4gqb_B 246 STSCVLSSAVHSQ-----------------CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATW 307 (344)
T ss_dssp C--CCEEEECCSS-----------------CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEE
T ss_pred CCcEEEEEcCCCC-----------------CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEE
Confidence 9999999998887 67788888887 57999999999999999988754 57889999999999
Q ss_pred ecCCC-EEEEEeCCCcEEEEECCCCe
Q psy10942 463 INKGT-QIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 463 s~~~~-~l~s~~~dg~v~vwd~~~~~ 487 (537)
+|+++ +|++++.|++|++|++.+..
T Consensus 308 sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 308 SPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CSSSTTEEEEEETTSCEEEEECCC--
T ss_pred eCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99876 67799999999999997654
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-39 Score=304.49 Aligned_cols=296 Identities=20% Similarity=0.205 Sum_probs=220.4
Q ss_pred hhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ec-chhhhhhhhcccCCCccE
Q psy10942 89 ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VG-FSDEILDIALLGEEDSHI 165 (537)
Q Consensus 89 ~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~l 165 (537)
++..+..| +.|.+++|+|+ +||+++.|+.|++||+..+. ......+ .+ |...|.+++|+ |++++|
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~---------~~~~~~~~~~~h~~~v~~v~~s-p~~~~l 73 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDD---------FTLIDVLDETAHKKAIRSVAWR-PHTSLL 73 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSC---------CEEEEEECTTCCCSCEEEEEEC-TTSSEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCC---------eEEEEEEecCCccCCEEEEEEC-CCCCEE
Confidence 34445544 68999999998 99999999999999998621 2344555 44 99999999999 678888
Q ss_pred EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCee
Q psy10942 166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLF 243 (537)
Q Consensus 166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l 243 (537)
++++.++. | ++||...........+.. +. +| ...|.++ +|+|++++|
T Consensus 74 as~s~D~~----v-----------------~iw~~~~~~~~~~~~~~~~~~~-----~h--~~~V~~v---~~sp~g~~l 122 (330)
T 2hes_X 74 AAGSFDST----V-----------------SIWAKEESADRTFEMDLLAIIE-----GH--ENEVKGV---AWSNDGYYL 122 (330)
T ss_dssp EEEETTSC----E-----------------EEEEC-------CCCEEEEEEC-----------CEEEE---EECTTSCEE
T ss_pred EEEeCCCc----E-----------------EEEEcccCcCccccceeEEEEc-----CC--CCcEEEE---EECCCCCEE
Confidence 88887777 9 999871100000011222 55 99 9999999 999999999
Q ss_pred eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe
Q psy10942 244 PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI 323 (537)
Q Consensus 244 ~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v 323 (537)
++++.|+.++ +|++...... .+. ...+.+|...|
T Consensus 123 as~s~D~~v~--iwd~~~~~~~---------------------------------------~~~-----~~~~~~h~~~v 156 (330)
T 2hes_X 123 ATCSRDKSVW--IWETDESGEE---------------------------------------YEC-----ISVLQEHSQDV 156 (330)
T ss_dssp EEEETTSCEE--EEECCTTCCC---------------------------------------CEE-----EEEECCCSSCE
T ss_pred EEEeCCCEEE--EEeccCCCCC---------------------------------------eEE-----EEEeccCCCce
Confidence 9999999999 9998542100 000 22345788999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCCc-eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEE
Q psy10942 324 NCVTVSPNDKLLASGSLDKTVKVWSTTGGL-KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA 402 (537)
Q Consensus 324 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 402 (537)
.+++|+|++++|++++.|+.|++||..... +++..+.. |..
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~--------------------------------h~~------ 198 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG--------------------------------HEG------ 198 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC--------------------------------CSS------
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC--------------------------------CCC------
Confidence 999999999999999999999999987321 23333333 333
Q ss_pred EecCCCceEEeeeeEEEEcCC--CCEEEEEeCCCcEEEEECCCc--------eeeeEeec-CCcceEEEEEecCCCEEEE
Q psy10942 403 ITKDENQIITGGVWFVNFSPL--DRILISSSGDATIKLWCLTDY--------VCLKSLEG-HDASVLRCHFINKGTQIVS 471 (537)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~-~~~~v~~~~~s~~~~~l~s 471 (537)
.|.+++|+|+ +.+|++++.|++|++||+..+ .....+.. |...|.+++|++++ +|++
T Consensus 199 -----------~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s 266 (330)
T 2hes_X 199 -----------TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIAS 266 (330)
T ss_dssp -----------CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEE
T ss_pred -----------cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEE
Confidence 7788888888 678999999999999998764 34555555 89999999999765 8999
Q ss_pred EeCCCcEEEEECCCCe--eEEE-ecCCcc-ceeccCCCCCCccccccceeeec--CCCEEEEEeCCCCEEeC
Q psy10942 472 TGADGLLKLWSIKTST--CVST-FDKHAL-KIRNSDSENDHKGFGLPRQLCSR--NSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 472 ~~~dg~v~vwd~~~~~--~~~~-~~~~~~-~i~~~~~~~~~~~~~~~~~~~s~--~~~~l~s~~~dg~i~vW 537 (537)
++.||.|++||..+++ .... +.+|.. .| .++ +|+| ++++|++++.||.|+||
T Consensus 267 ~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v-----------~~v---~~~~~~~~~~las~s~Dg~v~~W 324 (330)
T 2hes_X 267 VGADGVLAVYEEVDGEWKVFAKRALCHGVYEI-----------NVV---KWLELNGKTILATGGDDGIVNFW 324 (330)
T ss_dssp EETTSCEEEEEEETTEEEEEEEESCTTTTSCE-----------EEE---EEC-----CCEEEEETTSEEEEE
T ss_pred EeCCCEEEEEEcCCCceEEEeccccccccceE-----------EEE---EEecCCCceEEEEecCCCcEEEE
Confidence 9999999999998774 3333 356776 77 888 9999 78999999999999998
No 34
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-39 Score=297.00 Aligned_cols=282 Identities=18% Similarity=0.209 Sum_probs=235.2
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL 122 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i 122 (537)
+.+.+.++ .++| +++++++++.||.|++||+++++.+..+..+ ..|.+++|+|++++|++++.|+.|++
T Consensus 12 h~~~V~~~--~fsp--------~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 12 RSDRVKGI--DFHP--------TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp ECSCEEEE--EECS--------SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred CCCceEEE--EECC--------CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 55677778 5688 6789999999999999999999988888765 58999999999999999999999999
Q ss_pred EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942 123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL 202 (537)
Q Consensus 123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~ 202 (537)
||+.+ ++.+..+.+|.+.|.+++|+ |++.++++++.++. | ++||+
T Consensus 82 wd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~sgs~D~~----v-----------------~lWd~-- 126 (304)
T 2ynn_A 82 FNYNT-----------GEKVVDFEAHPDYIRSIAVH-PTKPYVLSGSDDLT----V-----------------KLWNW-- 126 (304)
T ss_dssp EETTT-----------CCEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSC----E-----------------EEEEG--
T ss_pred EECCC-----------CcEEEEEeCCCCcEEEEEEc-CCCCEEEEECCCCe----E-----------------EEEEC--
Confidence 99999 68888999999999999999 77888888888777 9 99999
Q ss_pred Hhhhccccccc---ccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceee
Q psy10942 203 EAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGA 278 (537)
Q Consensus 203 ~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~ 278 (537)
++.... +. +| ...|.++ +|+| ++.+|++|+.|+.|+ +|++.....
T Consensus 127 -----~~~~~~~~~~~-----~h--~~~v~~v---~~~p~~~~~l~sgs~D~~v~--iwd~~~~~~-------------- 175 (304)
T 2ynn_A 127 -----ENNWALEQTFE-----GH--EHFVMCV---AFNPKDPSTFASGCLDRTVK--VWSLGQSTP-------------- 175 (304)
T ss_dssp -----GGTTEEEEEEC-----CC--CSCEEEE---EECTTCTTEEEEEETTSEEE--EEETTCSSC--------------
T ss_pred -----CCCcchhhhhc-----cc--CCcEEEE---EECCCCCCEEEEEeCCCeEE--EEECCCCCc--------------
Confidence 655332 66 99 9999999 9999 578899999998888 888765210
Q ss_pred eeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCceee
Q psy10942 279 FYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGLKLL 356 (537)
Q Consensus 279 ~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~ 356 (537)
. ......|...+..+.|+| ++++|++++.|+.|++||++ ..+.+
T Consensus 176 -----------------------------~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~-~~~~~ 221 (304)
T 2ynn_A 176 -----------------------------N----FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ-TKSCV 221 (304)
T ss_dssp -----------------------------S----EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT-TTEEE
T ss_pred -----------------------------c----ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC-CCccc
Confidence 0 001124556788888876 67789999999999999988 55666
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942 357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436 (537)
Q Consensus 357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 436 (537)
..+..|.. .+.+++|+|++++|++|+.||.|
T Consensus 222 ~~~~~h~~-------------------------------------------------~v~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 222 ATLEGHMS-------------------------------------------------NVSFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp EEEECCSS-------------------------------------------------CEEEEEECSSSSEEEEEETTSCE
T ss_pred eeeCCCCC-------------------------------------------------CEEEEEECCCCCEEEEEcCCCeE
Confidence 66665544 78889999999999999999999
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCCC--EEEEEeCCCcEEEEECCC
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGT--QIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~v~vwd~~~ 485 (537)
++||+.+++.+..+..|...+.+++|+|++. ++++++.|| +.+|++.+
T Consensus 253 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 253 KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999999999999999999999999999875 577777665 77888754
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-41 Score=323.90 Aligned_cols=337 Identities=14% Similarity=0.137 Sum_probs=260.1
Q ss_pred eeeeeeeeccCCcc-eEEEe----------cCcceEEEEEcCccc---eeeeeccccccceeeeEeecCccccccCCcEE
Q psy10942 4 CVTCFDVIPQITSE-FSVHC----------GRDKVLFTWDLSSRK---QLRSYPAYESLETCAVFHLSDETESKSGGKTF 69 (537)
Q Consensus 4 ~V~~~~~~~~~~~~-~l~s~----------~~~g~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (537)
.|++++|+ |+++ +|+++ +.|+.|++||+.+++ .+..+.+...+..+ .+.| ++.+
T Consensus 14 ~v~~~~~s--p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~--~~s~--------~~~~ 81 (416)
T 2pm9_A 14 RTATFAWS--HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDL--DWSH--------NNKI 81 (416)
T ss_dssp ESCBCCBC--SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEE--EECS--------SSSC
T ss_pred hcceEeeC--CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEE--EECC--------CCCe
Confidence 68999999 7876 99999 889999999999886 45556667777777 5677 6689
Q ss_pred EEEeCccceEEeeeccc----eehhhhcCCC-cceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeE
Q psy10942 70 VLAGGEKSLLHYYETSA----VKELYQHGLS-SPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK 143 (537)
Q Consensus 70 ~~~~~~~~~i~~wd~~~----~~~~~~~~~~-~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 143 (537)
|++++.||.|++||+.+ .+.+..+..| +.|.+++|+|+ +++|++++.|+.|++||+.+....... . ......
T Consensus 82 l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~-~~~~~~ 159 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN-Y-TPLTPG 159 (416)
T ss_dssp EEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT-C-CCBCCC
T ss_pred EEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc-c-cccccc
Confidence 99999999999999987 3466666644 69999999998 899999999999999999884210000 0 011223
Q ss_pred EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cc-ccccc
Q psy10942 144 QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KH-NTERL 220 (537)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~-~~~~~ 220 (537)
.+.+|...|.+++|+|.++..+++++.++. | ++||+ .+.+.. +. .....
T Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~----v-----------------~iwd~-------~~~~~~~~~~~~~~~~ 211 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQSLAHVFASAGSSNF----A-----------------SIWDL-------KAKKEVIHLSYTSPNS 211 (416)
T ss_dssp CSCCSSCCCCEEEECSSCTTEEEEESSSSC----E-----------------EEEET-------TTTEEEEEECCCCCSS
T ss_pred cccCCCCCeeEEEeCCCCCcEEEEEcCCCC----E-----------------EEEEC-------CCCCcceEEecccccc
Confidence 346788899999999544677777777766 9 99999 766655 32 01112
Q ss_pred cCCCcCeEEEEeccCcccCC-CeeeeccCCC---cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942 221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEP---STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT 296 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~---~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~ 296 (537)
+| ...|.++ +|+|++ .++++++.|+ .|+ +|++....
T Consensus 212 ~~--~~~v~~~---~~~~~~~~~l~~~~~d~~~~~i~--~~d~~~~~--------------------------------- 251 (416)
T 2pm9_A 212 GI--KQQLSVV---EWHPKNSTRVATATGSDNDPSIL--IWDLRNAN--------------------------------- 251 (416)
T ss_dssp CC--CCCEEEE---EECSSCTTEEEEEECCSSSCCCC--EEETTSTT---------------------------------
T ss_pred cc--CCceEEE---EECCCCCCEEEEEECCCCCceEE--EEeCCCCC---------------------------------
Confidence 45 6789999 999997 5788888887 788 77776521
Q ss_pred EEEEECCCCceeeeeeccccc-ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCC
Q psy10942 297 VKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGAD 374 (537)
Q Consensus 297 i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d 374 (537)
.. ...+. +|...|.+++|+| ++++|++++.|+.|++||+. ..+.+..+..|..
T Consensus 252 ---------~~-----~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~-~~~~~~~~~~~~~---------- 306 (416)
T 2pm9_A 252 ---------TP-----LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE-SAEQLSQFPARGN---------- 306 (416)
T ss_dssp ---------SC-----SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS-SCCEEEEEECSSS----------
T ss_pred ---------CC-----cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC-CCccceeecCCCC----------
Confidence 00 22334 6888999999999 99999999999999999998 5555555555443
Q ss_pred CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeec-
Q psy10942 375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEG- 452 (537)
Q Consensus 375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 452 (537)
.+.+++|+|++ ++|++++.|+.|++||+.+.+.......
T Consensus 307 ---------------------------------------~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~ 347 (416)
T 2pm9_A 307 ---------------------------------------WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQET 347 (416)
T ss_dssp ---------------------------------------CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---
T ss_pred ---------------------------------------ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccc
Confidence 78889999998 8999999999999999987654332211
Q ss_pred ----------------------------------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 453 ----------------------------------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 453 ----------------------------------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
|..++.+++|+|+|++|++++.|+.|+||++.+.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 348 ETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 5677889999999999999999999999998764
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-39 Score=310.73 Aligned_cols=288 Identities=18% Similarity=0.251 Sum_probs=231.4
Q ss_pred hhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh------------------hh
Q psy10942 91 YQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD------------------EI 152 (537)
Q Consensus 91 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v 152 (537)
..+.+.+.|.+++|+|||++||+++ ++.+++|++.+ ++.+..+..|.. .|
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~-----------g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v 126 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD-----------GSLVARLSDDSAANKDPENLNTSSSPSSDLYI 126 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT-----------CCEEEEECC-----------------CCCCBE
T ss_pred EecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecC-----------CCEEEEecCccccccccccccccccCCCceeE
Confidence 3345667999999999999999976 68899999988 555666655432 38
Q ss_pred hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEE
Q psy10942 153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTL 230 (537)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~ 230 (537)
.+++|+ +++++|++++.++. | ++||+ .+++.. +. +| ...|.+
T Consensus 127 ~~v~~s-~dg~~l~s~~~d~~----i-----------------~iwd~-------~~~~~~~~~~-----~h--~~~v~~ 170 (393)
T 1erj_A 127 RSVCFS-PDGKFLATGAEDRL----I-----------------RIWDI-------ENRKIVMILQ-----GH--EQDIYS 170 (393)
T ss_dssp EEEEEC-TTSSEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEE
T ss_pred EEEEEC-CCCCEEEEEcCCCe----E-----------------EEEEC-------CCCcEEEEEc-----cC--CCCEEE
Confidence 899999 78888988887777 9 99999 777665 77 99 999999
Q ss_pred EeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeee
Q psy10942 231 LERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLN 310 (537)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~ 310 (537)
+ +|+|++++|++++.|+.++ +|++..+. ....
T Consensus 171 ~---~~~p~~~~l~s~s~d~~v~--iwd~~~~~-------------------------------------------~~~~ 202 (393)
T 1erj_A 171 L---DYFPSGDKLVSGSGDRTVR--IWDLRTGQ-------------------------------------------CSLT 202 (393)
T ss_dssp E---EECTTSSEEEEEETTSEEE--EEETTTTE-------------------------------------------EEEE
T ss_pred E---EEcCCCCEEEEecCCCcEE--EEECCCCe-------------------------------------------eEEE
Confidence 9 9999999999999998888 88877621 1000
Q ss_pred eecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942 311 VLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS 389 (537)
Q Consensus 311 ~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 389 (537)
..+...+.+++|+| ++++|++++.|+.|++||+. ....+..+.... .
T Consensus 203 ------~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~-~~~~~~~~~~~~-------------------------~ 250 (393)
T 1erj_A 203 ------LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-TGFLVERLDSEN-------------------------E 250 (393)
T ss_dssp ------EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT-TCCEEEEEC-----------------------------
T ss_pred ------EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC-CCcEEEeecccc-------------------------c
Confidence 01345689999999 89999999999999999998 444444332110 0
Q ss_pred eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc------------eeeeEeecCCcce
Q psy10942 390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY------------VCLKSLEGHDASV 457 (537)
Q Consensus 390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~v 457 (537)
...+|.. .|.+++|+|++++|++|+.|+.|++||+.+. .+...+.+|...|
T Consensus 251 ~~~~h~~-----------------~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 313 (393)
T 1erj_A 251 SGTGHKD-----------------SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 313 (393)
T ss_dssp --CCCSS-----------------CEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCE
T ss_pred CCCCCCC-----------------CEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcE
Confidence 0112332 7889999999999999999999999998753 3456788999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeec------CCCEEEEEeCC
Q psy10942 458 LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR------NSDCEYRGGWS 531 (537)
Q Consensus 458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~------~~~~l~s~~~d 531 (537)
.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...| .++ +|++ ++++|++++.|
T Consensus 314 ~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v-----------~~v---~~~~~~~~~p~~~~l~sgs~D 379 (393)
T 1erj_A 314 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSV-----------ISV---AVANGSSLGPEYNVFATGSGD 379 (393)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------EEE---EECSSCTTCTTCEEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCE-----------EEE---EecCCcCcCCCCCEEEEECCC
Confidence 999999999999999999999999999999999999999999 888 8765 78999999999
Q ss_pred CCEEeC
Q psy10942 532 PQVVVY 537 (537)
Q Consensus 532 g~i~vW 537 (537)
|.|+||
T Consensus 380 g~i~iW 385 (393)
T 1erj_A 380 CKARIW 385 (393)
T ss_dssp SEEEEE
T ss_pred CcEEEC
Confidence 999999
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-39 Score=304.06 Aligned_cols=292 Identities=17% Similarity=0.212 Sum_probs=238.0
Q ss_pred eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeC
Q psy10942 39 LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTA 116 (537)
Q Consensus 39 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~ 116 (537)
.+.+. +..++.++ .+.| ++.+|++++.|+.|++||..+++....+..+ ..|.+++|+|+|++||+++.
T Consensus 57 ~~~l~gH~~~V~~~--~~s~--------d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~ 126 (354)
T 2pbi_B 57 RRTLKGHGNKVLCM--DWCK--------DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL 126 (354)
T ss_dssp EEEEECCSSCEEEE--EECT--------TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST
T ss_pred EEEecCCCCeEEEE--EECC--------CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence 34444 56677777 5577 6689999999999999999988877776655 58999999999999999999
Q ss_pred CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHH
Q psy10942 117 DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK 196 (537)
Q Consensus 117 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 196 (537)
|+.+++|++..... .........+.+|...|.+++|+ +++..|++++.++. | +
T Consensus 127 d~~i~v~~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~t~s~D~~----v-----------------~ 179 (354)
T 2pbi_B 127 DNKCSVYPLTFDKN-----ENMAAKKKSVAMHTNYLSACSFT-NSDMQILTASGDGT----C-----------------A 179 (354)
T ss_dssp TSEEEEEECCCCTT-----CCSGGGCEEEEECSSCEEEEEEC-SSSSEEEEEETTSE----E-----------------E
T ss_pred CCCEEEEEEecccc-----ccccccceeeeccCCcEEEEEEe-CCCCEEEEEeCCCc----E-----------------E
Confidence 99999999875311 11124556788899999999999 77788888888877 9 9
Q ss_pred HHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc--CCCeeeeccCCCcceeccccccCCCccccccccc
Q psy10942 197 TFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK--EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVP 272 (537)
Q Consensus 197 ~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~--~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~ 272 (537)
+||+ ++++.. +. +| ...|.++ +++| ++++|++++.|+.++ +||+..
T Consensus 180 lwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~~~~~g~~l~sgs~Dg~v~--~wd~~~----------- 229 (354)
T 2pbi_B 180 LWDV-------ESGQLLQSFH-----GH--GADVLCL---DLAPSETGNTFVSGGCDKKAM--VWDMRS----------- 229 (354)
T ss_dssp EEET-------TTCCEEEEEE-----CC--SSCEEEE---EECCCSSCCEEEEEETTSCEE--EEETTT-----------
T ss_pred EEeC-------CCCeEEEEEc-----CC--CCCeEEE---EEEeCCCCCEEEEEeCCCeEE--EEECCC-----------
Confidence 9999 877766 77 99 9999999 8876 467788777777777 777655
Q ss_pred ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy10942 273 EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG 352 (537)
Q Consensus 273 ~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~ 352 (537)
++. ...+..|...|.+++|+|++++|++++.|+.|++||++ .
T Consensus 230 --------------------------------~~~-----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~-~ 271 (354)
T 2pbi_B 230 --------------------------------GQC-----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR-A 271 (354)
T ss_dssp --------------------------------CCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-T
T ss_pred --------------------------------CcE-----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC-C
Confidence 222 22235688899999999999999999999999999998 4
Q ss_pred ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942 353 LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG 432 (537)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (537)
...+..+..+. +.. .+.+++|+|++++|++|+.
T Consensus 272 ~~~~~~~~~~~------------------------------~~~-----------------~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 272 DREVAIYSKES------------------------------IIF-----------------GASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp TEEEEEECCTT------------------------------CCS-----------------CEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEcCCC------------------------------ccc-----------------ceeEEEEeCCCCEEEEEEC
Confidence 33332222111 000 6788999999999999999
Q ss_pred CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942 433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482 (537)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd 482 (537)
|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++++.|++|++|+
T Consensus 305 d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 305 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999999999999999999996
No 38
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.7e-39 Score=296.62 Aligned_cols=293 Identities=16% Similarity=0.262 Sum_probs=231.0
Q ss_pred eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce-----ehhhhcCCC-cceEEEEEeccccEE
Q psy10942 39 LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV-----KELYQHGLS-SPLVRIVRSSVKRMY 111 (537)
Q Consensus 39 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~-----~~~~~~~~~-~~v~~~~~s~~~~~l 111 (537)
..++. |..++..+ .+.|. +..++++++.|+.|++||+... ..+..+..| ..|.+++|+|++++|
T Consensus 10 ~~~l~gH~~~V~~l--~~~~~-------~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 80 (319)
T 3frx_A 10 RGTLEGHNGWVTSL--ATSAG-------QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA 80 (319)
T ss_dssp EEEECCCSSCEEEE--EECSS-------CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EEEEccccceEEEE--EccCC-------CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEE
Confidence 33444 55667777 55774 4579999999999999998753 345566655 699999999999999
Q ss_pred EEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcc
Q psy10942 112 AVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHN 191 (537)
Q Consensus 112 a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~ 191 (537)
++++.|++|++||+.+ ++....+.+|...|.+++|+ +++.++++++.++. |
T Consensus 81 ~s~s~D~~v~~wd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~D~~----i------------- 131 (319)
T 3frx_A 81 LSASWDKTLRLWDVAT-----------GETYQRFVGHKSDVMSVDID-KKASMIISGSRDKT----I------------- 131 (319)
T ss_dssp EEEETTSEEEEEETTT-----------TEEEEEEECCSSCEEEEEEC-TTSCEEEEEETTSC----E-------------
T ss_pred EEEeCCCEEEEEECCC-----------CCeeEEEccCCCcEEEEEEc-CCCCEEEEEeCCCe----E-------------
Confidence 9999999999999999 78888999999999999999 78888888888877 9
Q ss_pred hhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc
Q psy10942 192 EWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF 270 (537)
Q Consensus 192 ~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~ 270 (537)
++||+ +..... +. +| ...|.++ .++|.... +...
T Consensus 132 ----~vwd~-------~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~---------------~~~~--------- 166 (319)
T 3frx_A 132 ----KVWTI-------KGQCLATLL-----GH--NDWVSQV---RVVPNEKA---------------DDDS--------- 166 (319)
T ss_dssp ----EEEET-------TSCEEEEEC-----CC--SSCEEEE---EECCC---------------------C---------
T ss_pred ----EEEEC-------CCCeEEEEe-----cc--CCcEEEE---EEccCCCC---------------CCCc---------
Confidence 99998 644333 66 89 9999999 88875431 0000
Q ss_pred ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942 271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT 350 (537)
Q Consensus 271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~ 350 (537)
..+++++.|+.|++||+.+.+. ...+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 167 ---------------~~l~s~~~d~~i~~wd~~~~~~-----~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 167 ---------------VTIISAGNDKMVKAWNLNQFQI-----EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp ---------------CEEEEEETTSCEEEEETTTTEE-----EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred ---------------cEEEEEeCCCEEEEEECCcchh-----heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 1455666666666666665543 23456899999999999999999999999999999998
Q ss_pred CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE
Q psy10942 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS 430 (537)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (537)
..+.+..+..+ . .+.+++|+|++.+|+++
T Consensus 227 -~~~~~~~~~~~-~-------------------------------------------------~v~~~~~sp~~~~la~~ 255 (319)
T 3frx_A 227 -AKKAMYTLSAQ-D-------------------------------------------------EVFSLAFSPNRYWLAAA 255 (319)
T ss_dssp -TTEEEEEEECC-S-------------------------------------------------CEEEEEECSSSSEEEEE
T ss_pred -CCcEEEEecCC-C-------------------------------------------------cEEEEEEcCCCCEEEEE
Confidence 55554444322 1 78889999999999988
Q ss_pred eCCCcEEEEECCCceeeeEeec--------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 431 SGDATIKLWCLTDYVCLKSLEG--------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
+. +.+++|++..+..+..+.. |...+.+++|+|||++|++++.||.|++||+.++
T Consensus 256 ~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 256 TA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 76 4599999998777666542 4567899999999999999999999999998664
No 39
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=302.69 Aligned_cols=320 Identities=15% Similarity=0.224 Sum_probs=234.1
Q ss_pred ceeeeec-ccc-ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh---h-cCCCcceEEEEEeccccE
Q psy10942 37 KQLRSYP-AYE-SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY---Q-HGLSSPLVRIVRSSVKRM 110 (537)
Q Consensus 37 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~---~-~~~~~~v~~~~~s~~~~~ 110 (537)
+++.+++ +.+ .+..+ .++| ++.+|++++.|+.|++||+.+++... . ..+.+.|.+++|+|++++
T Consensus 6 ~~~~~~~~h~~~~v~~l--~~sp--------~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 75 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFL--AWNP--------AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY 75 (345)
T ss_dssp EEEEEECCSTTSCEEEE--EECT--------TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSE
T ss_pred EEeeeecCCCCCcEEEE--EECC--------CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCE
Confidence 4455555 333 45556 5688 67899999999999999998875322 1 234478999999999999
Q ss_pred EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCc
Q psy10942 111 YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSH 190 (537)
Q Consensus 111 la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~ 190 (537)
||+++.|+++++||+..+. .+.+..+.+|...|.+++|+ |++++|++++.++. |
T Consensus 76 l~s~s~D~~v~iw~~~~~~---------~~~~~~~~~h~~~v~~v~~s-p~~~~l~s~s~D~~----v------------ 129 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDD---------FECVTTLEGHENEVKSVAWA-PSGNLLATCSRDKS----V------------ 129 (345)
T ss_dssp EEEEETTSCEEEEEECCC----------EEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSC----E------------
T ss_pred EEEEECCCcEEEEEccCCC---------eEEEEEccCCCCCceEEEEe-CCCCEEEEEECCCe----E------------
Confidence 9999999999999987621 35678899999999999999 78889988888877 9
Q ss_pred chhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc
Q psy10942 191 NEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF 270 (537)
Q Consensus 191 ~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~ 270 (537)
++||+ ...........+.+| ...|.++ +|+|++++|++++.|+.++ +|+......
T Consensus 130 -----~iwd~-------~~~~~~~~~~~~~~h--~~~v~~~---~~~p~~~~l~s~s~d~~i~--~w~~~~~~~------ 184 (345)
T 3fm0_A 130 -----WVWEV-------DEEDEYECVSVLNSH--TQDVKHV---VWHPSQELLASASYDDTVK--LYREEEDDW------ 184 (345)
T ss_dssp -----EEEEE-------CTTSCEEEEEEECCC--CSCEEEE---EECSSSSCEEEEETTSCEE--EEEEETTEE------
T ss_pred -----EEEEC-------CCCCCeEEEEEecCc--CCCeEEE---EECCCCCEEEEEeCCCcEE--EEEecCCCE------
Confidence 99998 554321001112289 9999999 9999999999999999999 998765210
Q ss_pred ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942 271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT 350 (537)
Q Consensus 271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~ 350 (537)
+. ...+.+|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 185 --------------------------~~--------------~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 185 --------------------------VC--------------CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp --------------------------EE--------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred --------------------------EE--------------EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 00 12345788999999999999999999999999999975
Q ss_pred CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc-CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942 351 GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK-HALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS 429 (537)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (537)
....... +.....+. ..+++..+.+ |.. .|.+++|+|++..|++
T Consensus 225 ~~~~~~~----------~~~~~~~~--------~~~~~~~~~~~h~~-----------------~v~~v~~~~~~~~l~s 269 (345)
T 3fm0_A 225 LPGNEQG----------VACSGSDP--------SWKCICTLSGFHSR-----------------TIYDIAWCQLTGALAT 269 (345)
T ss_dssp CTTCTTC----------CCCC---C--------EEEEEEEECSSCSS-----------------CEEEEEECTTTCCEEE
T ss_pred cCCCCcc----------ceeeccCC--------ccceeEEecCCCCC-----------------cEEEEEEecCCCEEEE
Confidence 2211100 00000000 0112222222 222 7888999999999999
Q ss_pred EeCCCcEEEEECCCce---------eeeEeecCCcceEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942 430 SSGDATIKLWCLTDYV---------CLKSLEGHDASVLRCHFINKG-TQIVSTGADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 430 ~~~dg~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~ 492 (537)
++.|+.|++|+..... ......+|...|++++|+|++ .+||+++.||+|++|++.+++....+
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 9999999999986532 122335799999999999987 59999999999999999888765544
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.4e-39 Score=303.15 Aligned_cols=314 Identities=12% Similarity=0.104 Sum_probs=220.9
Q ss_pred CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc------cceEEeeeccce
Q psy10942 14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE------KSLLHYYETSAV 87 (537)
Q Consensus 14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~wd~~~~ 87 (537)
.++.++ .++.+.....|++....+. .+...+.++ .++| ++.+|++++. |+.|++|+..++
T Consensus 15 ~~~~~~-~~~g~~~~~~w~~p~~~p~---~H~~~V~~v--~fSp--------DG~~las~s~d~~~~wd~~v~~~~~~~~ 80 (357)
T 4g56_B 15 TENLYF-QSNGSSKGSAWGRPVTAPA---CMEVQIGAV--RYRR--------DGALLLAASSLSSRTWGGSIWVFKDPEG 80 (357)
T ss_dssp -----------------------------CCCSEEEEE--EECS--------SSCEEEEEECSSSSSCCEEEEEESSCC-
T ss_pred ccceEE-ecCCCccccccCCCCCCcc---cccCCEEEE--EECC--------CCCEEEEEcCCCCccccCeEEEEECCCC
Confidence 344443 4444556788987543321 245667777 5688 7799999987 788999998887
Q ss_pred ehhhhc-----CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCC
Q psy10942 88 KELYQH-----GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEED 162 (537)
Q Consensus 88 ~~~~~~-----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (537)
.....+ .+.+.|.+++|+|++++| +++.|++|+|||+.+++.. ........+|...|.+++|+ |++
T Consensus 81 ~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~-------~~~~~~~~~h~~~V~~v~~s-pdg 151 (357)
T 4g56_B 81 APNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESL-------LVNKFAKYEHDDIVKTLSVF-SDG 151 (357)
T ss_dssp --CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTSCEEEC---------------CCCCEEECCCSSCEEEEEEC-SSS
T ss_pred CcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeecccccee-------EEEeeccCCCCCCEEEEEEC-CCC
Confidence 655443 344689999999998755 5678999999999884211 11223456899999999999 788
Q ss_pred ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942 163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE 240 (537)
Q Consensus 163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~ 240 (537)
++|++++.++. | ++||+ ++++.. +. +| ...|.++ +|+|++
T Consensus 152 ~~l~sgs~dg~----v-----------------~iwd~-------~~~~~~~~~~-----~h--~~~v~~v---~~s~~~ 193 (357)
T 4g56_B 152 TQAVSGGKDFS----V-----------------KVWDL-------SQKAVLKSYN-----AH--SSEVNCV---AACPGK 193 (357)
T ss_dssp SEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EECTTC
T ss_pred CEEEEEeCCCe----E-----------------EEEEC-------CCCcEEEEEc-----CC--CCCEEEE---EEccCC
Confidence 88988888777 9 99999 877766 77 99 9999999 999987
Q ss_pred C-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942 241 D-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH 319 (537)
Q Consensus 241 ~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 319 (537)
. ++++++.|+.|+ +||+..+... . ......|
T Consensus 194 ~~~~~s~~~dg~v~--~wd~~~~~~~-------------------------------------------~---~~~~~~~ 225 (357)
T 4g56_B 194 DTIFLSCGEDGRIL--LWDTRKPKPA-------------------------------------------T---RIDFCAS 225 (357)
T ss_dssp SSCEEEEETTSCEE--ECCTTSSSCB-------------------------------------------C---BCCCTTC
T ss_pred CceeeeeccCCceE--EEECCCCcee-------------------------------------------e---eeeeccc
Confidence 5 678888888888 8887763210 0 1122346
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942 320 EKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 398 (537)
Q Consensus 320 ~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 398 (537)
...+.+++|+|+ +.+|++|+.|+.|++||++ ..+.+..+..|..
T Consensus 226 ~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-~~~~~~~~~~~~~---------------------------------- 270 (357)
T 4g56_B 226 DTIPTSVTWHPEKDDTFACGDETGNVSLVNIK-NPDSAQTSAVHSQ---------------------------------- 270 (357)
T ss_dssp CSCEEEEEECTTSTTEEEEEESSSCEEEEESS-CGGGCEEECCCSS----------------------------------
T ss_pred cccccchhhhhcccceEEEeecccceeEEECC-CCcEeEEEeccce----------------------------------
Confidence 677999999997 4688899999999999988 5555555544433
Q ss_pred EEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CCCEEEEEeCCC
Q psy10942 399 WTLAITKDENQIITGGVWFVNFSPLD-RILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KGTQIVSTGADG 476 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg 476 (537)
.|.+++|+|++ ++|++|+.|++|++||+++++.+..+ +|.+.|++++|+| ++++|++++.||
T Consensus 271 ---------------~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 271 ---------------NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp ---------------CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred ---------------eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCC
Confidence 78889999987 68999999999999999998877665 6999999999998 799999999999
Q ss_pred cEEEEECCCCe
Q psy10942 477 LLKLWSIKTST 487 (537)
Q Consensus 477 ~v~vwd~~~~~ 487 (537)
+|++|++.+..
T Consensus 335 ~v~iW~~~~~~ 345 (357)
T 4g56_B 335 KVLHHHLPSEG 345 (357)
T ss_dssp CEEEEECC---
T ss_pred eEEEEECCCCC
Confidence 99999997643
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.8e-38 Score=297.95 Aligned_cols=312 Identities=14% Similarity=0.191 Sum_probs=254.6
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
+.|.+++|+|||++++++..++.+..|.... ........+|...|.+++|+ ++++++++++ ++.
T Consensus 10 ~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~~~~-dg~--- 73 (337)
T 1gxr_A 10 KPAYSFHVTADGQMQPVPFPPDALIGPGIPR-----------HARQINTLNHGEVVCAVTIS-NPTRHVYTGG-KGC--- 73 (337)
T ss_dssp EECCEEEECSSSCEEECCCCTTSSSSTTCCS-----------EEEEEEEECCSSCCCEEEEC-SSSSEEEEEC-BSE---
T ss_pred CceeEEEECCCCCEEEeecCCCcEeccccCC-----------ccccceeccCCCceEEEEEe-cCCcEEEEcC-CCe---
Confidence 5789999999999999988877777776555 33334445799999999999 7788887776 655
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
+ ++||+ .+.... +......+| ...|.++ +|+|++++|++++.|+.++
T Consensus 74 -i-----------------~iw~~-------~~~~~~~~~~~~~~~~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~- 122 (337)
T 1gxr_A 74 -V-----------------KVWDI-------SHPGNKSPVSQLDCLNR--DNYIRSC---KLLPDGCTLIVGGEASTLS- 122 (337)
T ss_dssp -E-----------------EEEET-------TSTTCCSCSEEEECSCT--TSBEEEE---EECTTSSEEEEEESSSEEE-
T ss_pred -E-----------------EEEEC-------CCCCceeeeecccccCC--CCcEEEE---EEcCCCCEEEEEcCCCcEE-
Confidence 9 99998 655433 221122268 8999999 9999999999998888888
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL 334 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 334 (537)
+|++..... .. ...+..|...|.+++|+|++++
T Consensus 123 -~~d~~~~~~-----------------------------------------~~-----~~~~~~~~~~i~~~~~~~~~~~ 155 (337)
T 1gxr_A 123 -IWDLAAPTP-----------------------------------------RI-----KAELTSSAPACYALAISPDSKV 155 (337)
T ss_dssp -EEECCCC-------------------------------------------EE-----EEEEECSSSCEEEEEECTTSSE
T ss_pred -EEECCCCCc-----------------------------------------ce-----eeecccCCCceEEEEECCCCCE
Confidence 888766210 00 1223467788999999999999
Q ss_pred EEEEeCCCcEEEEEccCCceeeEE----------EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942 335 LASGSLDKTVKVWSTTGGLKLLNV----------LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404 (537)
Q Consensus 335 l~~~~~d~~i~i~d~~~~~~~~~~----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 404 (537)
+++++.|+.|++||++ ..+.+.. +..++++..+++++.|+.|++||+++++.+..+....
T Consensus 156 l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--------- 225 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS--------- 225 (337)
T ss_dssp EEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---------
T ss_pred EEEEeCCCcEEEEeCC-CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC---------
Confidence 9999999999999998 4444444 4445678999999999999999999998777664322
Q ss_pred cCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
.+.+++|+|+++++++++.++.|++||+.+++. ..+..|...|.+++|+|++++|++++.||.|++||+.
T Consensus 226 ---------~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 226 ---------QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp ---------CEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ---------ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 788899999999999999999999999998765 4667799999999999999999999999999999999
Q ss_pred CCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 485 TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 485 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+++.+.. ..|...+ .++ +|+|++++|++++.||.|++|
T Consensus 296 ~~~~~~~-~~~~~~v-----------~~~---~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 296 YGASIFQ-SKESSSV-----------LSC---DISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp TCCEEEE-EECSSCE-----------EEE---EECTTSCEEEEEETTSCEEEE
T ss_pred CCeEEEE-ecCCCcE-----------EEE---EECCCCCEEEEecCCCeEEEE
Confidence 9988754 3567778 888 999999999999999999998
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.9e-39 Score=313.01 Aligned_cols=330 Identities=12% Similarity=0.053 Sum_probs=257.0
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF 145 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 145 (537)
+++++++++.|+.|++||+.+++....+..+..+....|+|++++||+++.|+.|++||+.+ .+....+
T Consensus 67 ~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----------~~~~~~~ 135 (420)
T 3vl1_A 67 VGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNF-----------NLQREID 135 (420)
T ss_dssp EETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTS-----------CEEEEET
T ss_pred cCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCC-----------cceeeec
Confidence 66889999999999999999999988888877777778899999999999999999999998 6777788
Q ss_pred ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCC
Q psy10942 146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRD 223 (537)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~ 223 (537)
.+|...|.+++|+ +++++|++++.++. | ++||+ .+++.. +. +|
T Consensus 136 ~~h~~~v~~~~~~-~~~~~l~s~s~d~~----i-----------------~iwd~-------~~~~~~~~~~-----~h- 180 (420)
T 3vl1_A 136 QAHVSEITKLKFF-PSGEALISSSQDMQ----L-----------------KIWSV-------KDGSNPRTLI-----GH- 180 (420)
T ss_dssp TSSSSCEEEEEEC-TTSSEEEEEETTSE----E-----------------EEEET-------TTCCCCEEEE-----CC-
T ss_pred ccccCccEEEEEC-CCCCEEEEEeCCCe----E-----------------EEEeC-------CCCcCceEEc-----CC-
Confidence 8999999999999 67888888888777 9 99999 777666 66 89
Q ss_pred CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--CcceEEEEEeCCCeEEEEE
Q psy10942 224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GTVELLASGSLDKTVKVWS 301 (537)
Q Consensus 224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~d~~i~i~~ 301 (537)
...|.++ +|+|++++|++++.|+.++ +|++..+. + ...+..+.. ..+..+.. ..
T Consensus 181 -~~~v~~~---~~~~~~~~l~s~~~d~~v~--iwd~~~~~----~-----~~~~~~~~~~~~~v~~~~~---------~~ 236 (420)
T 3vl1_A 181 -RATVTDI---AIIDRGRNVLSASLDGTIR--LWECGTGT----T-----IHTFNRKENPHDGVNSIAL---------FV 236 (420)
T ss_dssp -SSCEEEE---EEETTTTEEEEEETTSCEE--EEETTTTE----E-----EEEECBTTBTTCCEEEEEE---------EE
T ss_pred -CCcEEEE---EEcCCCCEEEEEcCCCcEE--EeECCCCc----e-----eEEeecCCCCCCCccEEEE---------ec
Confidence 9999999 9999999999999999999 99998742 1 222222211 11111111 10
Q ss_pred CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942 302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS 381 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 381 (537)
... ......+...+.+++|+|++++|++++.||.|++||++ ..+.+..+..
T Consensus 237 -~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-------------------- 287 (420)
T 3vl1_A 237 -GTD-------RQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF-SKEQTIQLPS-------------------- 287 (420)
T ss_dssp -CCC-------SSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT-TCCEEEEECC--------------------
T ss_pred -CCc-------ceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC-CCceeEEccc--------------------
Confidence 111 11223456778888889999899999888888888887 3332222211
Q ss_pred CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEEEEECCCce-eeeEeec-CCcceE
Q psy10942 382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCLTDYV-CLKSLEG-HDASVL 458 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~-~~~~v~ 458 (537)
.|.. .+.+++|+|+++ +|++|+.||.|++||+.+++ ++..+.. |...|.
T Consensus 288 -----------~~~~-----------------~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 339 (420)
T 3vl1_A 288 -----------KFTC-----------------SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPIN 339 (420)
T ss_dssp -----------TTSS-----------------CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEE
T ss_pred -----------ccCC-----------------CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCce
Confidence 1221 788999999998 99999999999999999864 4777777 566777
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCe---------eEEEecCCccceeccCCCCCCccccccceeeecCCC---EEE
Q psy10942 459 RCHFINKGTQIVSTGADGLLKLWSIKTST---------CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD---CEY 526 (537)
Q Consensus 459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~---~l~ 526 (537)
++. ++++++|++++.|+.|++|++...+ ....+..|...+ .++ +|+|+++ .|+
T Consensus 340 ~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~~g~l~ 404 (420)
T 3vl1_A 340 NVY-FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV-----------SQF---CYVSDDESNGEVL 404 (420)
T ss_dssp EEE-EETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC-----------CEE---EEECCSSSSCEEE
T ss_pred EEE-eCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcce-----------EEE---EEccCCCCcceEE
Confidence 775 5578899999999999999987632 223445666777 888 9999999 788
Q ss_pred EEeCCCCEEeC
Q psy10942 527 RGGWSPQVVVY 537 (537)
Q Consensus 527 s~~~dg~i~vW 537 (537)
+++.+|.+.+|
T Consensus 405 a~g~~g~~~~~ 415 (420)
T 3vl1_A 405 EVGKNNFCALY 415 (420)
T ss_dssp EEETTTEEEEE
T ss_pred EEcCCceEEEE
Confidence 88889999988
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-38 Score=298.97 Aligned_cols=290 Identities=16% Similarity=0.186 Sum_probs=222.6
Q ss_pred hhhcCCC-cceEEEEE-----ec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCC
Q psy10942 90 LYQHGLS-SPLVRIVR-----SS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEED 162 (537)
Q Consensus 90 ~~~~~~~-~~v~~~~~-----s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (537)
...+.+| +.|.+++| ++ ++++||+|+.|++|++||+..... ..........+.+|...|.+++|+ +++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~----~~~~~~~~~~l~~h~~~V~~~~~~-~~~ 88 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQ----NGYFGIPHKALTGHNHFVSDLALS-QEN 88 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCC----SSBSEEEEEEECCCSSCEEEEEEC-SST
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCc----ccccccccchhccCCCceEEEEEC-CCC
Confidence 3344444 68999999 76 999999999999999999976311 011134567889999999999999 788
Q ss_pred ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC
Q psy10942 163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE 240 (537)
Q Consensus 163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~ 240 (537)
.++++++.++. | ++||+ ++++.. +. +| ...|.++ +|+|++
T Consensus 89 ~~l~s~s~D~~----v-----------------~lwd~-------~~~~~~~~~~-----~h--~~~v~~v---~~sp~~ 130 (343)
T 2xzm_R 89 CFAISSSWDKT----L-----------------RLWDL-------RTGTTYKRFV-----GH--QSEVYSV---AFSPDN 130 (343)
T ss_dssp TEEEEEETTSE----E-----------------EEEET-------TSSCEEEEEE-----CC--CSCEEEE---EECSST
T ss_pred CEEEEEcCCCc----E-----------------EEEEC-------CCCcEEEEEc-----CC--CCcEEEE---EECCCC
Confidence 88888887777 9 99999 777765 67 99 9999999 999999
Q ss_pred CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccC
Q psy10942 241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE 320 (537)
Q Consensus 241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 320 (537)
++|++++.|+.|+ +|++.... . .. ......|.
T Consensus 131 ~~l~s~~~d~~i~--~wd~~~~~---------------------------------~--~~-----------~~~~~~~~ 162 (343)
T 2xzm_R 131 RQILSAGAEREIK--LWNILGEC---------------------------------K--FS-----------SAEKENHS 162 (343)
T ss_dssp TEEEEEETTSCEE--EEESSSCE---------------------------------E--EE-----------CCTTTSCS
T ss_pred CEEEEEcCCCEEE--EEeccCCc---------------------------------e--ee-----------eecccCCC
Confidence 9999999999999 99876410 0 00 11123678
Q ss_pred CCeEEEEEcCCC----------CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942 321 KDINCVTVSPND----------KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVST 390 (537)
Q Consensus 321 ~~v~~~~~s~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 390 (537)
..|.+++|+|++ .+|++++.|+.|++||.. .. ....
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~--------------------------------~~~~ 208 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQ--------------------------------IRYT 208 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TE--------------------------------EEEE
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--Cc--------------------------------eeEE
Confidence 889999999986 456666666666666632 22 2333
Q ss_pred eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEE
Q psy10942 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQI 469 (537)
Q Consensus 391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l 469 (537)
+..|.. .|.+++|+|++++|++|+.||.|++||+.. ......+. +...|.+++|+|++.++
T Consensus 209 ~~~h~~-----------------~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~l 270 (343)
T 2xzm_R 209 FKAHES-----------------NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWV 270 (343)
T ss_dssp EECCSS-----------------CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEE
T ss_pred EcCccc-----------------cceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEE
Confidence 333433 788999999999999999999999999954 44444443 55679999999999887
Q ss_pred EEEeCCCcEEEEECCCCeeEE--Eec-----------CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942 470 VSTGADGLLKLWSIKTSTCVS--TFD-----------KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 470 ~s~~~dg~v~vwd~~~~~~~~--~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v 536 (537)
+++ .|+.|++|++.+++... .+. +|...+ .++ +|+|+|++|++|+.||.|++
T Consensus 271 a~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~sp~g~~l~sg~~Dg~v~~ 335 (343)
T 2xzm_R 271 AVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQC-----------TSL---AWNALGKKLFAGFTDGVIRT 335 (343)
T ss_dssp EEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCE-----------EEE---EECSSSCCEEEEETTSEEEE
T ss_pred EEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCce-----------EEE---EECCCCCeEEEecCCceEEE
Confidence 755 57789999998776543 443 455666 788 99999999999999999999
Q ss_pred C
Q psy10942 537 Y 537 (537)
Q Consensus 537 W 537 (537)
|
T Consensus 336 w 336 (343)
T 2xzm_R 336 F 336 (343)
T ss_dssp E
T ss_pred E
Confidence 8
No 44
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-38 Score=303.10 Aligned_cols=316 Identities=16% Similarity=0.224 Sum_probs=244.5
Q ss_pred EEEEEcCccce-----eeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCc-----
Q psy10942 28 LFTWDLSSRKQ-----LRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSS----- 97 (537)
Q Consensus 28 v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~----- 97 (537)
..+|+....+. .+.+.+...+.++ .++| +++++++++ ++.+++|++.+++.+..+..+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v--~fsp--------dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~ 110 (393)
T 1erj_A 42 YILYNPALPREIDVELHKSLDHTSVVCCV--KFSN--------DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD 110 (393)
T ss_dssp EEEECTTSCCCEEEEEEEEEECSSCCCEE--EECT--------TSSEEEEEC-BSCEEEEETTTCCEEEEECC-------
T ss_pred EEEECCCCCcccCceeEEecCCCCEEEEE--EECC--------CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccc
Confidence 44676554332 2344566777777 5688 668888877 7889999999988876665431
Q ss_pred --------------ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc
Q psy10942 98 --------------PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS 163 (537)
Q Consensus 98 --------------~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (537)
.|.+++|+|+|++||+++.|+.|++||+.+ .+....+.+|...|.+++|+ +++.
T Consensus 111 ~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~-p~~~ 178 (393)
T 1erj_A 111 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN-----------RKIVMILQGHEQDIYSLDYF-PSGD 178 (393)
T ss_dssp ----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT-----------TEEEEEECCCSSCEEEEEEC-TTSS
T ss_pred cccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCC-----------CcEEEEEccCCCCEEEEEEc-CCCC
Confidence 499999999999999999999999999998 68888999999999999999 7888
Q ss_pred cEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc-CCC
Q psy10942 164 HIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK-EED 241 (537)
Q Consensus 164 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~-~~~ 241 (537)
.|++++.++. | ++||+ .++++. .. .+ ...+.++ +|+| +++
T Consensus 179 ~l~s~s~d~~----v-----------------~iwd~-------~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~ 220 (393)
T 1erj_A 179 KLVSGSGDRT----V-----------------RIWDL-------RTGQCSLTL-----SI--EDGVTTV---AVSPGDGK 220 (393)
T ss_dssp EEEEEETTSE----E-----------------EEEET-------TTTEEEEEE-----EC--SSCEEEE---EECSTTCC
T ss_pred EEEEecCCCc----E-----------------EEEEC-------CCCeeEEEE-----Ec--CCCcEEE---EEECCCCC
Confidence 8888888777 9 99999 777766 33 45 6789999 9999 899
Q ss_pred eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942 242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK 321 (537)
Q Consensus 242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 321 (537)
+|++++.|+.++ +|++..+.. +...+.. .....+|..
T Consensus 221 ~l~~~s~d~~v~--iwd~~~~~~--------------------------------~~~~~~~---------~~~~~~h~~ 257 (393)
T 1erj_A 221 YIAAGSLDRAVR--VWDSETGFL--------------------------------VERLDSE---------NESGTGHKD 257 (393)
T ss_dssp EEEEEETTSCEE--EEETTTCCE--------------------------------EEEEC---------------CCCSS
T ss_pred EEEEEcCCCcEE--EEECCCCcE--------------------------------EEeeccc---------ccCCCCCCC
Confidence 999999999999 999876310 1111100 112357889
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEE
Q psy10942 322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL 401 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~ 401 (537)
.|.+++|+|++++|++++.|+.|++||+... ........ ...+.+...+.+|..
T Consensus 258 ~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~-~~~~~~~~--------------------~~~~~~~~~~~~h~~----- 311 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA-NNKSDSKT--------------------PNSGTCEVTYIGHKD----- 311 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC------------------------------------CEEEEEECCSS-----
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEECCCC-CCcccccC--------------------CCCCcceEEEecccC-----
Confidence 9999999999999999999999999999832 21111110 011233344445554
Q ss_pred EEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec------CCCEEEEEeCC
Q psy10942 402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN------KGTQIVSTGAD 475 (537)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~s~~~d 475 (537)
.|.+++|+|++++|++|+.|+.|++||+.+++++..+.+|.+.|.+++|++ ++++|++++.|
T Consensus 312 ------------~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~D 379 (393)
T 1erj_A 312 ------------FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD 379 (393)
T ss_dssp ------------CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred ------------cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCC
Confidence 678889999999999999999999999999999999999999999999986 68899999999
Q ss_pred CcEEEEECCC
Q psy10942 476 GLLKLWSIKT 485 (537)
Q Consensus 476 g~v~vwd~~~ 485 (537)
|+|++|++..
T Consensus 380 g~i~iW~~~~ 389 (393)
T 1erj_A 380 CKARIWKYKK 389 (393)
T ss_dssp SEEEEEEEEE
T ss_pred CcEEECcccc
Confidence 9999999754
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-38 Score=296.59 Aligned_cols=317 Identities=12% Similarity=0.115 Sum_probs=257.5
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCc-cceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSS-RKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
..|.+++|+ |||++++++..++.+..|+... .+.+....+.+++..+ .+.| +++++++++ +|.|++
T Consensus 10 ~~v~~~~~s--~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~--------~~~~l~~~~-dg~i~i 76 (337)
T 1gxr_A 10 KPAYSFHVT--ADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAV--TISN--------PTRHVYTGG-KGCVKV 76 (337)
T ss_dssp EECCEEEEC--SSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEE--EECS--------SSSEEEEEC-BSEEEE
T ss_pred CceeEEEEC--CCCCEEEeecCCCcEeccccCCccccceeccCCCceEEE--EEec--------CCcEEEEcC-CCeEEE
Confidence 368899999 8999999988777676765544 4555566788888888 5677 668899998 999999
Q ss_pred eeccceehhhhc------CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942 82 YETSAVKELYQH------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI 155 (537)
Q Consensus 82 wd~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 155 (537)
||+.+++....+ .+...|.+++|+|++++|++++.|+.|++||+.+++ ......+..|...+.++
T Consensus 77 w~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---------~~~~~~~~~~~~~i~~~ 147 (337)
T 1gxr_A 77 WDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT---------PRIKAELTSSAPACYAL 147 (337)
T ss_dssp EETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEE
T ss_pred EECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC---------cceeeecccCCCceEEE
Confidence 999887644333 345799999999999999999999999999998831 22566788899999999
Q ss_pred hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEec
Q psy10942 156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLER 233 (537)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~ 233 (537)
+|+ ++++.+++++.++. + ++||+ ++++.. +. +| ...|.++
T Consensus 148 ~~~-~~~~~l~~~~~dg~----v-----------------~~~d~-------~~~~~~~~~~-----~~--~~~i~~~-- 189 (337)
T 1gxr_A 148 AIS-PDSKVCFSCCSDGN----I-----------------AVWDL-------HNQTLVRQFQ-----GH--TDGASCI-- 189 (337)
T ss_dssp EEC-TTSSEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE--
T ss_pred EEC-CCCCEEEEEeCCCc----E-----------------EEEeC-------CCCceeeeee-----cc--cCceEEE--
Confidence 999 67888888877766 9 99999 776655 66 89 9999999
Q ss_pred cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942 234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR 313 (537)
Q Consensus 234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 313 (537)
+|+|++++|++++.|+.++ +|++... +....
T Consensus 190 -~~~~~~~~l~~~~~dg~i~--~~d~~~~-------------------------------------------~~~~~--- 220 (337)
T 1gxr_A 190 -DISNDGTKLWTGGLDNTVR--SWDLREG-------------------------------------------RQLQQ--- 220 (337)
T ss_dssp -EECTTSSEEEEEETTSEEE--EEETTTT-------------------------------------------EEEEE---
T ss_pred -EECCCCCEEEEEecCCcEE--EEECCCC-------------------------------------------ceEee---
Confidence 9999999999988888888 8877662 11100
Q ss_pred ccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942 314 GHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 393 (537)
Q Consensus 314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 393 (537)
..+...+.+++|+|+++++++++.|+.|++||+.. .+. ..+..
T Consensus 221 ---~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~-~~~-~~~~~-------------------------------- 263 (337)
T 1gxr_A 221 ---HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK-PDK-YQLHL-------------------------------- 263 (337)
T ss_dssp ---EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-SCE-EEECC--------------------------------
T ss_pred ---ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-CCe-EEEcC--------------------------------
Confidence 12456789999999999999999999999999983 221 11222
Q ss_pred CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe
Q psy10942 394 HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG 473 (537)
Q Consensus 394 ~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 473 (537)
|.. .+.+++|+|++++|++++.||.|++||+.+++.+.... |...|.+++|+|++++|++++
T Consensus 264 ~~~-----------------~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 264 HES-----------------CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp CSS-----------------CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEE
T ss_pred Ccc-----------------ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEec
Confidence 221 78899999999999999999999999999988875544 888999999999999999999
Q ss_pred CCCcEEEEEC
Q psy10942 474 ADGLLKLWSI 483 (537)
Q Consensus 474 ~dg~v~vwd~ 483 (537)
.||.|++|++
T Consensus 326 ~dg~i~iw~~ 335 (337)
T 1gxr_A 326 GDKKATVYEV 335 (337)
T ss_dssp TTSCEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999999996
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3e-37 Score=289.99 Aligned_cols=295 Identities=18% Similarity=0.216 Sum_probs=235.6
Q ss_pred eccceehhhhcCCC-cceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942 83 ETSAVKELYQHGLS-SPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE 160 (537)
Q Consensus 83 d~~~~~~~~~~~~~-~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (537)
..++.++..++++| +.|++++|+|+ +++||+|+.|++|+|||+...+. ....+.+.+.+|...|.+++|+ +
T Consensus 24 ~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~------~~~~~~~~l~~h~~~V~~~~~s-~ 96 (340)
T 4aow_A 24 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET------NYGIPQRALRGHSHFVSDVVIS-S 96 (340)
T ss_dssp --CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS------CSEEEEEEECCCSSCEEEEEEC-T
T ss_pred cCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc------ccceeeEEEeCCCCCEEEEEEC-C
Confidence 34555566678766 69999999998 68999999999999999987321 1134567889999999999999 7
Q ss_pred CCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc
Q psy10942 161 EDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK 238 (537)
Q Consensus 161 ~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~ 238 (537)
++++|++++.++. + ++|+. ...... .. .+ ...+... .+++
T Consensus 97 dg~~l~s~~~d~~----i-----------------~~~~~-------~~~~~~~~~~-----~~--~~~~~~~---~~~~ 138 (340)
T 4aow_A 97 DGQFALSGSWDGT----L-----------------RLWDL-------TTGTTTRRFV-----GH--TKDVLSV---AFSS 138 (340)
T ss_dssp TSSEEEEEETTSE----E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE---EECT
T ss_pred CCCEEEEEccccc----c-----------------eEEee-------cccceeeeec-----CC--CCceeEE---EEee
Confidence 8889988888777 8 88888 555544 44 56 6778888 8889
Q ss_pred CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG 318 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 318 (537)
++++|++++.|+.++ +|+..... .. ......
T Consensus 139 ~~~~l~s~s~d~~~~--~~d~~~~~-------------------------------------------~~----~~~~~~ 169 (340)
T 4aow_A 139 DNRQIVSGSRDKTIK--LWNTLGVC-------------------------------------------KY----TVQDES 169 (340)
T ss_dssp TSSCEEEEETTSCEE--EECTTSCE-------------------------------------------EE----EECSSS
T ss_pred cCccceeecCCCeEE--EEEeCCCc-------------------------------------------eE----EEEecc
Confidence 999999998888888 88876521 00 112346
Q ss_pred cCCCeEEEEEcCCC--CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942 319 HEKDINCVTVSPND--KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396 (537)
Q Consensus 319 ~~~~v~~~~~s~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 396 (537)
|...+..++|++++ .++++++.|+.|++||+. ..+.+..+..|..
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~-~~~~~~~~~~h~~-------------------------------- 216 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKTNHIGHTG-------------------------------- 216 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TTEEEEEECCCSS--------------------------------
T ss_pred ccCcccceEEccCCCCcEEEEEcCCCEEEEEECC-CCceeeEecCCCC--------------------------------
Confidence 78889999998864 567888888888888888 5555555544443
Q ss_pred ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG 476 (537)
Q Consensus 397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 476 (537)
.|.+++|+|++++|++|+.|+.|++||+.+.+.+..+..+ ..|.+++|+|++.+ ++++.|+
T Consensus 217 -----------------~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~-~~~~~d~ 277 (340)
T 4aow_A 217 -----------------YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYW-LCAATGP 277 (340)
T ss_dssp -----------------CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSE-EEEEETT
T ss_pred -----------------cEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCce-eeccCCC
Confidence 7889999999999999999999999999999999988854 67999999998765 5566799
Q ss_pred cEEEEECCCCeeEEEec---------CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 477 LLKLWSIKTSTCVSTFD---------KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 477 ~v~vwd~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.|++||++++..+..+. +|...| +++ +|+|||++|++|+.||.|+||
T Consensus 278 ~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~l---~~s~dg~~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 278 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQC-----------TSL---AWSADGQTLFAGYTDNLVRVW 333 (340)
T ss_dssp EEEEEETTTTEEEEEECCC-------CCCCCE-----------EEE---EECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEECCCCeEEEeccccceeeeccCCCCCE-----------EEE---EECCCCCEEEEEeCCCEEEEE
Confidence 99999999988777664 456667 888 999999999999999999999
No 47
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.8e-38 Score=293.65 Aligned_cols=307 Identities=17% Similarity=0.205 Sum_probs=230.4
Q ss_pred eeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce-------ehhhhcCCC-cceEEEEEecccc
Q psy10942 39 LRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV-------KELYQHGLS-SPLVRIVRSSVKR 109 (537)
Q Consensus 39 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~-------~~~~~~~~~-~~v~~~~~s~~~~ 109 (537)
...+. +...+..+.|.+.+. .+.++.+|++++.|+.|++||+.+. .....+..| ..|.+++|+|++.
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~----~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQK----ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSS----TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred eeeeccchhhhhheeeEEEee----cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 33444 556677773322210 0116689999999999999999753 344555555 6899999999999
Q ss_pred EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCC
Q psy10942 110 MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRS 189 (537)
Q Consensus 110 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~ 189 (537)
+|++++.|++|++||+.+ ++....+.+|...|.+++|+ |++++|++++.++. |
T Consensus 90 ~l~s~s~D~~v~lwd~~~-----------~~~~~~~~~h~~~v~~v~~s-p~~~~l~s~~~d~~----i----------- 142 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRT-----------GTTYKRFVGHQSEVYSVAFS-PDNRQILSAGAERE----I----------- 142 (343)
T ss_dssp EEEEEETTSEEEEEETTS-----------SCEEEEEECCCSCEEEEEEC-SSTTEEEEEETTSC----E-----------
T ss_pred EEEEEcCCCcEEEEECCC-----------CcEEEEEcCCCCcEEEEEEC-CCCCEEEEEcCCCE----E-----------
Confidence 999999999999999998 67888999999999999999 78888888887777 9
Q ss_pred cchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc
Q psy10942 190 HNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI 269 (537)
Q Consensus 190 ~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~ 269 (537)
++||+ .... ........+| ...|.++ +|+|++.... . + ....
T Consensus 143 ------~~wd~-------~~~~-~~~~~~~~~~--~~~v~~~---~~~~~~~~~~--------~--~-~~~~-------- 184 (343)
T 2xzm_R 143 ------KLWNI-------LGEC-KFSSAEKENH--SDWVSCV---RYSPIMKSAN--------K--V-QPFA-------- 184 (343)
T ss_dssp ------EEEES-------SSCE-EEECCTTTSC--SSCEEEE---EECCCCCSCS--------C--C-CSSC--------
T ss_pred ------EEEec-------cCCc-eeeeecccCC--Cceeeee---eecccccccc--------c--c-CCCC--------
Confidence 99998 5322 2111122378 8999999 9999864211 1 0 0000
Q ss_pred cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942 270 FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349 (537)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~ 349 (537)
.++++++.|+.|++||... .. ...+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 185 ----------------~~l~s~~~d~~i~iwd~~~-~~-----~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 185 ----------------PYFASVGWDGRLKVWNTNF-QI-----RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp ----------------CEEEEEETTSEEEEEETTT-EE-----EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred ----------------CEEEEEcCCCEEEEEcCCC-ce-----eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3688888999999999432 22 3345789999999999999999999999999999999
Q ss_pred cCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS 429 (537)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (537)
.........+. +. . .+.+++|+|+++++++
T Consensus 243 ~~~~~~~~~~~-~~--------------------------------~-----------------~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 243 LNLTYPQREFD-AG--------------------------------S-----------------TINQIAFNPKLQWVAV 272 (343)
T ss_dssp SCCSSCSEEEE-CS--------------------------------S-----------------CEEEEEECSSSCEEEE
T ss_pred CCCcccceeec-CC--------------------------------C-----------------cEEEEEECCCCCEEEE
Confidence 52322222111 00 0 6788999999988876
Q ss_pred EeCCCcEEEEECCCceeee--Eee-----------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 430 SSGDATIKLWCLTDYVCLK--SLE-----------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 430 ~~~dg~i~i~d~~~~~~~~--~~~-----------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
+ .|+.|++||+.+++... .+. +|...|.+++|+|++++|++|+.||.|++|++++++
T Consensus 273 ~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 273 G-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp E-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred E-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 5 57889999998765443 333 678889999999999999999999999999987653
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-37 Score=293.90 Aligned_cols=290 Identities=14% Similarity=0.084 Sum_probs=248.2
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
+.+.|.+++|+|++++|++++.|+.|++||+.+ .+.+..+.+|...|.+++|+ +++++|++++.++.
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-----------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~~dg~- 97 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN-----------GERLGTLDGHTGTIWSIDVD-CFTKYCVTGSADYS- 97 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTT-----------CCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTTE-
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-----------chhhhhhhhcCCcEEEEEEc-CCCCEEEEEeCCCe-
Confidence 346899999999999999999999999999998 78889999999999999999 68888888887777
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC----
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME---- 249 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d---- 249 (537)
| ++||+ .+++.. .. .+ ...|.++ +|+|+++++++++.+
T Consensus 98 ---i-----------------~iwd~-------~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 98 ---I-----------------KLWDV-------SNGQCVATW-----KS--PVPVKRV---EFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp ---E-----------------EEEET-------TTCCEEEEE-----EC--SSCEEEE---EECTTSSEEEEEECCBTTB
T ss_pred ---E-----------------EEEEC-------CCCcEEEEe-----ec--CCCeEEE---EEccCCCEEEEecCCccCC
Confidence 9 99999 777776 33 47 7899999 999999999999998
Q ss_pred -CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC--CeEEE
Q psy10942 250 -PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK--DINCV 326 (537)
Q Consensus 250 -~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~v~~~ 326 (537)
+.+. +|++........ +..... .. ...+..|.. .+.++
T Consensus 141 ~g~i~--~~d~~~~~~~~~-----------------------------~~~~~~---~~-----~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 141 PGSIN--IYEIERDSATHE-----------------------------LTKVSE---EP-----IHKIITHEGLDAATVA 181 (369)
T ss_dssp CCEEE--EEEEEECTTTCC-----------------------------EEEECS---SC-----SEEEECCTTCCCEEEE
T ss_pred CCEEE--EEEecCCcccee-----------------------------eccccc---ce-----eeeccCCcCccceeEE
Confidence 9999 999887422110 111110 01 112234444 89999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecC
Q psy10942 327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD 406 (537)
Q Consensus 327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 406 (537)
+|+|++++|++++.||.|++||+......+..+..|..
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------------------------------ 219 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK------------------------------------------ 219 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS------------------------------------------
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC------------------------------------------
Confidence 99999999999999999999999844566666655543
Q ss_pred CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC----------
Q psy10942 407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---------- 476 (537)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---------- 476 (537)
.+.+++|+|++++|++++.|+.|++||+.+++.+..+. +...+..++|+|+++++++++.++
T Consensus 220 -------~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 220 -------SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp -------CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred -------ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 88899999999999999999999999999999998888 778899999999999999999988
Q ss_pred ----cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 477 ----LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 477 ----~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.+++||..+++.+..+.+|...| .++ +|+|++++|++++.||.|+||
T Consensus 292 ~~~~~i~~~d~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 292 EGKFEARFYHKIFEEEIGRVQGHFGPL-----------NTV---AISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp ---CEEEEEETTTCCEEEEEECCSSCE-----------EEE---EECTTSSEEEEEETTSEEEEE
T ss_pred CCcceeEEEecCCCcchhheecccCcE-----------EEE---EECCCCCEEEEEcCCCeEEEE
Confidence 89999999999999999999999 999 999999999999999999998
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.8e-37 Score=284.63 Aligned_cols=285 Identities=16% Similarity=0.226 Sum_probs=237.6
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEE
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISL 122 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~i 122 (537)
+..++..+ .+.| +++++++++.|+.|++|++.+++....+..| ..|.+++|+|++++|++++.|+.|++
T Consensus 22 h~~~v~~~--~~s~--------~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 22 HTKAVSSV--KFSP--------NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CSSCEEEE--EECT--------TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cCCcEEEE--EECC--------CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 55677777 5678 6689999999999999999999888888765 68999999999999999999999999
Q ss_pred EecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHH
Q psy10942 123 YRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERIL 202 (537)
Q Consensus 123 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~ 202 (537)
||+.+ .+.+..+.+|...|.+++|+ ++++++++++.++. | ++||+
T Consensus 92 wd~~~-----------~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~d~~----i-----------------~iwd~-- 136 (312)
T 4ery_A 92 WDVSS-----------GKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDES----V-----------------RIWDV-- 136 (312)
T ss_dssp EETTT-----------CCEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSC----E-----------------EEEET--
T ss_pred EECCC-----------CcEEEEEcCCCCCEEEEEEc-CCCCEEEEEeCCCc----E-----------------EEEEC--
Confidence 99998 68888999999999999999 77888888887777 9 99999
Q ss_pred Hhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942 203 EAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY 280 (537)
Q Consensus 203 ~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~ 280 (537)
++++.. +. .| ..+|.++ +|+|++++|++++.|+.++ +|++..+.
T Consensus 137 -----~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~--~wd~~~~~----------------- 182 (312)
T 4ery_A 137 -----KTGKCLKTLP-----AH--SDPVSAV---HFNRDGSLIVSSSYDGLCR--IWDTASGQ----------------- 182 (312)
T ss_dssp -----TTCCEEEEEC-----CC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTTCC-----------------
T ss_pred -----CCCEEEEEec-----CC--CCcEEEE---EEcCCCCEEEEEeCCCcEE--EEECCCCc-----------------
Confidence 777665 66 89 9999999 9999999999999999988 88877621
Q ss_pred eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR 360 (537)
Q Consensus 281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 360 (537)
.. ......+...+..++|+|++++|++++.|+.|++||+. ..+.+..+.
T Consensus 183 --------------------------~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~ 231 (312)
T 4ery_A 183 --------------------------CL----KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYT 231 (312)
T ss_dssp --------------------------EE----EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT-TTEEEEEEC
T ss_pred --------------------------ee----eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC-CCcEEEEEE
Confidence 10 00112345678999999999999999999999999998 556555555
Q ss_pred ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942 361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC 440 (537)
Q Consensus 361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (537)
.|... .. .+......+++++|++|+.||.|++||
T Consensus 232 ~~~~~--------------------------------~~--------------~~~~~~~~~~~~~l~sg~~dg~i~vwd 265 (312)
T 4ery_A 232 GHKNE--------------------------------KY--------------CIFANFSVTGGKWIVSGSEDNLVYIWN 265 (312)
T ss_dssp SSCCS--------------------------------SS--------------CCCEEEECSSSCEEEECCTTSCEEEEE
T ss_pred ecCCc--------------------------------eE--------------EEEEEEEeCCCcEEEEECCCCEEEEEE
Confidence 44321 00 122223346788999999999999999
Q ss_pred CCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy10942 441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIK 484 (537)
Q Consensus 441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~ 484 (537)
+.+++.+..+.+|...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 266 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 266 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999999999999997 69999999864
No 50
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-37 Score=287.92 Aligned_cols=305 Identities=15% Similarity=0.195 Sum_probs=219.9
Q ss_pred ccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce--ehhhhc--C-CCcceEEEEEeccc
Q psy10942 35 SRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV--KELYQH--G-LSSPLVRIVRSSVK 108 (537)
Q Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~--~~~~~~--~-~~~~v~~~~~s~~~ 108 (537)
+.++++.+. +.+++.++ .+.| + +|++++.|+.|++||+.++ +.+..+ . +.+.|.+++|+|++
T Consensus 3 ~~~~~~~~~~h~~~v~~~--~~s~--------~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSF--DFSQ--------G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp CCEEEEEEECCSSCEEEE--EEET--------T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS
T ss_pred ccccceeeccCCCceeee--ccCC--------C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC
Confidence 344555555 55667777 4455 4 8999999999999999875 334434 2 44689999999999
Q ss_pred cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCC
Q psy10942 109 RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANR 188 (537)
Q Consensus 109 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 188 (537)
++||+++.|++|++||+..... .....+....+.+|...|.+++|+ |++++|++++.++. |
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~----~~~~~~~~~~~~~h~~~V~~v~~s-p~g~~las~s~D~~----v---------- 131 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESAD----RTFEMDLLAIIEGHENEVKGVAWS-NDGYYLATCSRDKS----V---------- 131 (330)
T ss_dssp SEEEEEETTSCEEEEEC-----------CCCEEEEEEC----CEEEEEEC-TTSCEEEEEETTSC----E----------
T ss_pred CEEEEEeCCCcEEEEEcccCcC----ccccceeEEEEcCCCCcEEEEEEC-CCCCEEEEEeCCCE----E----------
Confidence 9999999999999999864210 001145677889999999999999 78889988888877 9
Q ss_pred CcchhhHHHHHHHHHhhhcccc----ccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCC
Q psy10942 189 SHNEWFDKTFERILEAKFKQSS----SQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTY 262 (537)
Q Consensus 189 ~~~~~~~~~wd~~~~~~~~~~~----~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~ 262 (537)
++||+ ... ++. +. +| ...|.++ +|+|++++|++++.|+.|+ +|+...+
T Consensus 132 -------~iwd~-------~~~~~~~~~~~~~~-----~h--~~~v~~v---~~~p~~~~l~s~s~D~~i~--iW~~~~~ 185 (330)
T 2hes_X 132 -------WIWET-------DESGEEYECISVLQ-----EH--SQDVKHV---IWHPSEALLASSSYDDTVR--IWKDYDD 185 (330)
T ss_dssp -------EEEEC-------CTTCCCCEEEEEEC-----CC--SSCEEEE---EECSSSSEEEEEETTSCEE--EEEEETT
T ss_pred -------EEEec-------cCCCCCeEEEEEec-----cC--CCceEEE---EECCCCCEEEEEcCCCeEE--EEECCCC
Confidence 99998 432 222 55 89 9999999 9999999999999999999 9987652
Q ss_pred CcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeC
Q psy10942 263 HFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSL 340 (537)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~ 340 (537)
. .+. ...+.+|...|.+++|+|+ +.+|++++.
T Consensus 186 ~-----------------------------------------~~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 219 (330)
T 2hes_X 186 D-----------------------------------------WEC-----VAVLNGHEGTVWSSDFDKTEGVFRLCSGSD 219 (330)
T ss_dssp E-----------------------------------------EEE-----EEEECCCSSCEEEEEECCSSSSCEEEEEET
T ss_pred C-----------------------------------------eeE-----EEEccCCCCcEEEEEecCCCCeeEEEEEeC
Confidence 0 000 2234678899999999998 778999999
Q ss_pred CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc-CCcceEEEEEecCCCceEEeeeeEEE
Q psy10942 341 DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK-HALKIWTLAITKDENQIITGGVWFVN 419 (537)
Q Consensus 341 d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~i~~~~ 419 (537)
|++|++||+..... ... ..| .....+.. |.. .|.+++
T Consensus 220 D~~v~iw~~~~~~~---------~~~-----------~~~-----~~~~~~~~~h~~-----------------~v~~v~ 257 (330)
T 2hes_X 220 DSTVRVWKYMGDDE---------DDQ-----------QEW-----VCEAILPDVHKR-----------------QVYNVA 257 (330)
T ss_dssp TSCEEEEEEEEECT---------TSC-----------EEE-----EEEEECCSCCSS-----------------CEEEEE
T ss_pred CCeEEEEEecCCCc---------ccc-----------cee-----EEeeeccccccc-----------------ceEEEE
Confidence 99999999872110 000 000 11112222 333 678888
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCce--eeeE-eecCCc-ceEEEEEec--CCCEEEEEeCCCcEEEEECCC
Q psy10942 420 FSPLDRILISSSGDATIKLWCLTDYV--CLKS-LEGHDA-SVLRCHFIN--KGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~-~~~~~~-~v~~~~~s~--~~~~l~s~~~dg~v~vwd~~~ 485 (537)
|++++ +|++++.||.|++||..+++ .... +.+|.. .|.+++|+| ++++|++++.||+|++||+++
T Consensus 258 ~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 258 WGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 88665 78999999999999998764 3333 356877 899999999 789999999999999999864
No 51
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=311.66 Aligned_cols=345 Identities=8% Similarity=0.021 Sum_probs=233.0
Q ss_pred eeeeeeeeeccCCc-------ceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc
Q psy10942 3 FCVTCFDVIPQITS-------EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE 75 (537)
Q Consensus 3 ~~V~~~~~~~~~~~-------~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (537)
..|.+++|+|.+++ ++|++++.++.. . ...| +..++++++.
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-----------------~-------~~~~--------~~~~laS~s~ 181 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-----------------E-------PLNE--------HLEMFDKEKH 181 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------------------------
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccC-----------------C-------ccch--------hhhhhccCCC
Confidence 46889999965422 788888765420 0 0134 6678999999
Q ss_pred cceEEeeeccceehh----hhcCC-CcceEEEEEecc------ccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942 76 KSLLHYYETSAVKEL----YQHGL-SSPLVRIVRSSV------KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 76 ~~~i~~wd~~~~~~~----~~~~~-~~~v~~~~~s~~------~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
|+.|++||+.+++.. ..+.+ .+.|.+++|+|+ +.+||+++.|++|++||+.++................
T Consensus 182 D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~ 261 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLT 261 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEE
T ss_pred CceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEE
Confidence 999999999887642 22333 368999999997 5799999999999999998742110000011223457
Q ss_pred eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---cccccccc
Q psy10942 145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLG 221 (537)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~ 221 (537)
+.+|...|.+++|++ + +.|++++.++. | ++||+ +++... +. +
T Consensus 262 l~~h~~~v~sv~~s~-~-~~lasgs~Dgt----V-----------------~lWD~-------~~~~~~~~~~~-----~ 306 (524)
T 2j04_B 262 LSLADSLITTFDFLS-P-TTVVCGFKNGF----V-----------------AEFDL-------TDPEVPSFYDQ-----V 306 (524)
T ss_dssp ECCTTTCEEEEEESS-S-SEEEEEETTSE----E-----------------EEEET-------TBCSSCSEEEE-----C
T ss_pred EEcCCCCEEEEEecC-C-CeEEEEeCCCE----E-----------------EEEEC-------CCCCCceEEee-----c
Confidence 889999999999994 3 47888887777 9 99999 765332 56 9
Q ss_pred CCCcCeEEEEeccC--cccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEE
Q psy10942 222 RDELKTVTLLERGK--TVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVK 298 (537)
Q Consensus 222 h~~~~~v~~~~~~~--~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~ 298 (537)
| ...|.++ + |+|++ .+|++++.|++++ +||+.... + ...
T Consensus 307 H--~~~V~sv---~~~~s~~g~~~laS~S~D~tvk--lWD~~~~~----~-----~~~---------------------- 348 (524)
T 2j04_B 307 H--DSYILSV---STAYSDFEDTVVSTVAVDGYFY--IFNPKDIA----T-----TKT---------------------- 348 (524)
T ss_dssp S--SSCEEEE---EEECCTTSCCEEEEEETTSEEE--EECGGGHH----H-----HCE----------------------
T ss_pred c--cccEEEE---EEEcCCCCCeEEEEeccCCeEE--EEECCCCC----c-----ccc----------------------
Confidence 9 9999998 5 67887 8899999999999 99987631 1 000
Q ss_pred EEECCCCceeeeeecccccccC--CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc
Q psy10942 299 VWSTTGGLKLLNVLRGHKKGHE--KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376 (537)
Q Consensus 299 i~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 376 (537)
+.+|. ..|.+++|+|+++.+++++.|++|++||++ ....+..+..|..
T Consensus 349 -----------------~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~-~~~~~~~l~gH~~------------ 398 (524)
T 2j04_B 349 -----------------TVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR-AAFAVHPLVSRET------------ 398 (524)
T ss_dssp -----------------EEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT-CTTCCEEEEECSS------------
T ss_pred -----------------cccccccCcccceEeCCCcCeEEEeCCCCcEEEEECc-ccccceeeecCCC------------
Confidence 11121 247789999999999999999999999998 4444455555554
Q ss_pred EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec----
Q psy10942 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG---- 452 (537)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---- 452 (537)
.|++++|+|++++|++|+.|++|++||+... .+..++.
T Consensus 399 -------------------------------------~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~ 440 (524)
T 2j04_B 399 -------------------------------------TITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSAT 440 (524)
T ss_dssp -------------------------------------CEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------
T ss_pred -------------------------------------ceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccc
Confidence 8899999999999999999999999998653 2222221
Q ss_pred -CCcceEEEEEecCCCEEEEEeCCCcEEEEECC-CCeeEEEecCCccceeccCCCCCCccccccceeeecCCC---EEEE
Q psy10942 453 -HDASVLRCHFINKGTQIVSTGADGLLKLWSIK-TSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSD---CEYR 527 (537)
Q Consensus 453 -~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~---~l~s 527 (537)
+...+.+++|+|+++.+. ... .+++|+.. ++.++..+.+|...| .++ +|+|+++ +||+
T Consensus 441 ~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V-----------~~V---afsp~~~~~~~lAs 503 (524)
T 2j04_B 441 QKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINI-----------TCT---KWNETSAGGKCYAF 503 (524)
T ss_dssp CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSC-----------CCE---EECCSTTTTTEEEE
T ss_pred eeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceE-----------EEE---ECCCCCCccHHHHh
Confidence 112477999999998553 322 23444433 577888999999999 999 9999965 9999
Q ss_pred EeCCCCEEeC
Q psy10942 528 GGWSPQVVVY 537 (537)
Q Consensus 528 ~~~dg~i~vW 537 (537)
|+.||.||||
T Consensus 504 g~~~g~vrlw 513 (524)
T 2j04_B 504 SNSAGLLTLE 513 (524)
T ss_dssp ECTTSEEEEE
T ss_pred hccCceEEEE
Confidence 9999999998
No 52
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.5e-36 Score=281.93 Aligned_cols=293 Identities=19% Similarity=0.269 Sum_probs=227.0
Q ss_pred Cccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee-----hhhhcCCC-cceEEEEEec
Q psy10942 34 SSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK-----ELYQHGLS-SPLVRIVRSS 106 (537)
Q Consensus 34 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~~-~~v~~~~~s~ 106 (537)
++.++..++. |...|.++ .+.|. ++++|++++.|+.|++||+.+++ ....+..| +.|.+++|+|
T Consensus 26 ~~~~l~~tL~GH~~~V~~v--~~sp~-------~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~ 96 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQI--ATTPQ-------FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 96 (340)
T ss_dssp CEEEEEEEECCCSSCEEEE--EECTT-------CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT
T ss_pred CceEEEEEECCccCCEEEE--EEeCC-------CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC
Confidence 3444555666 67778888 56885 56799999999999999997654 34455554 6999999999
Q ss_pred cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeeccc
Q psy10942 107 VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGA 186 (537)
Q Consensus 107 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 186 (537)
++++|++++.|+.|++|+... .........+...+..+.++ +++..+++++.++. +
T Consensus 97 dg~~l~s~~~d~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~s~d~~----~-------- 152 (340)
T 4aow_A 97 DGQFALSGSWDGTLRLWDLTT-----------GTTTRRFVGHTKDVLSVAFS-SDNRQIVSGSRDKT----I-------- 152 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTT-----------TEEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSC----E--------
T ss_pred CCCEEEEEcccccceEEeecc-----------cceeeeecCCCCceeEEEEe-ecCccceeecCCCe----E--------
Confidence 999999999999999999998 56677777777778888888 77888888887776 8
Q ss_pred CCCcchhhHHHHHHHHHhhhccccccc---ccccccccCCCcCeEEEEeccCcccCC--CeeeeccCCCcceeccccccC
Q psy10942 187 NRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGRDELKTVTLLERGKTVKEE--DLFPRQSMEPSTLEELEKRKT 261 (537)
Q Consensus 187 ~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h~~~~~v~~~~~~~~s~~~--~~l~~~~~d~~i~~~iw~~~~ 261 (537)
++||. ...... +. +| ...+..+ +|++++ .+++++
T Consensus 153 ---------~~~d~-------~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~~~~s~--------------- 191 (340)
T 4aow_A 153 ---------KLWNT-------LGVCKYTVQDE-----SH--SEWVSCV---RFSPNSSNPIIVSC--------------- 191 (340)
T ss_dssp ---------EEECT-------TSCEEEEECSS-----SC--SSCEEEE---EECSCSSSCEEEEE---------------
T ss_pred ---------EEEEe-------CCCceEEEEec-----cc--cCcccce---EEccCCCCcEEEEE---------------
Confidence 99998 544333 44 78 8888888 777654 233444
Q ss_pred CCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC
Q psy10942 262 YHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD 341 (537)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 341 (537)
+.|+.|++||+.+.+. ...+.+|...|++++|+|++++|++++.|
T Consensus 192 ------------------------------~~d~~i~i~d~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 192 ------------------------------GWDKLVKVWNLANCKL-----KTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp ------------------------------ETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ------------------------------cCCCEEEEEECCCCce-----eeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 4455555555555543 23346788999999999999999999999
Q ss_pred CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942 342 KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421 (537)
Q Consensus 342 ~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s 421 (537)
+.|++||+. ..+.+..+..+. .+.+++|+
T Consensus 237 g~i~iwd~~-~~~~~~~~~~~~--------------------------------------------------~v~~~~~~ 265 (340)
T 4aow_A 237 GQAMLWDLN-EGKHLYTLDGGD--------------------------------------------------IINALCFS 265 (340)
T ss_dssp CEEEEEETT-TTEEEEEEECSS--------------------------------------------------CEEEEEEC
T ss_pred CeEEEEEec-cCceeeeecCCc--------------------------------------------------eEEeeecC
Confidence 999999998 555544443221 67788899
Q ss_pred CCCCEEEEEeCCCcEEEEECCCceeeeEee---------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 422 PLDRILISSSGDATIKLWCLTDYVCLKSLE---------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
|++.+++ ++.|+.|++||++++..+..+. +|...|++++|+|++++|++|+.||.|+|||+++|+
T Consensus 266 ~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 266 PNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9877554 5568999999999877766553 678899999999999999999999999999999885
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.2e-37 Score=291.18 Aligned_cols=298 Identities=13% Similarity=0.102 Sum_probs=237.9
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccc--eeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILK--FRKQFVGFSDEILDIALLGEEDSHIVVASNEY 172 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 172 (537)
+.+.|.+++|+|++++||+++.|+.|++||+.+ .+ ....+.+|...|.+++|+ ++++++++++.++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~~~~~dg 74 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSG-----------NKWVQVHELKEHNGQVTGVDWA-PDSNRIVTCGTDR 74 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEET-----------TEEEEEEEEECCSSCEEEEEEE-TTTTEEEEEETTS
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-----------CcEEeeeeecCCCCcccEEEEe-CCCCEEEEEcCCC
Confidence 346899999999999999999999999999998 44 788899999999999999 6888888888776
Q ss_pred ccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCcccCCCeeeeccC
Q psy10942 173 LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM 248 (537)
Q Consensus 173 ~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~ 248 (537)
. | ++||+ .+.+.. +. .| ...|.++ +|+|++++|++++.
T Consensus 75 ~----i-----------------~vwd~-------~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~ 116 (372)
T 1k8k_C 75 N----A-----------------YVWTL-------KGRTWKPTLVIL-----RI--NRAARCV---RWAPNEKKFAVGSG 116 (372)
T ss_dssp C----E-----------------EEEEE-------ETTEEEEEEECC-----CC--SSCEEEE---EECTTSSEEEEEET
T ss_pred e----E-----------------EEEEC-------CCCeeeeeEEee-----cC--CCceeEE---EECCCCCEEEEEeC
Confidence 6 9 99998 666533 35 78 8999999 99999999999999
Q ss_pred CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942 249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV 328 (537)
Q Consensus 249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 328 (537)
|+.++ +|++...... .+ . ......|...|.+++|
T Consensus 117 d~~v~--i~d~~~~~~~--------------------------------~~--------~----~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 117 SRVIS--ICYFEQENDW--------------------------------WV--------C----KHIKKPIRSTVLSLDW 150 (372)
T ss_dssp TSSEE--EEEEETTTTE--------------------------------EE--------E----EEECTTCCSCEEEEEE
T ss_pred CCEEE--EEEecCCCcc--------------------------------ee--------e----eeeecccCCCeeEEEE
Confidence 99999 9988773210 00 0 1122467888999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE--ECCCCeeeeeeccCCcceEEEEEecC
Q psy10942 329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW--SIKTSTCVSTFDKHALKIWTLAITKD 406 (537)
Q Consensus 329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~i~~~~~~~~ 406 (537)
+|++++|++++.|+.|++||+........ +. ...| ....++.+..+..|..
T Consensus 151 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-----~~------------~~~~~~~~~~~~~~~~~~~~~~---------- 203 (372)
T 1k8k_C 151 HPNSVLLAAGSCDFKCRIFSAYIKEVEER-----PA------------PTPWGSKMPFGELMFESSSSCG---------- 203 (372)
T ss_dssp CTTSSEEEEEETTSCEEEEECCCTTTSCC-----CC------------CBTTBSCCCTTCEEEECCCCSS----------
T ss_pred cCCCCEEEEEcCCCCEEEEEccccccccc-----cc------------ccccccccchhhheEecCCCCC----------
Confidence 99999999999999999999862110000 00 0000 1223455555555544
Q ss_pred CCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC-
Q psy10942 407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT- 485 (537)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~- 485 (537)
.+.+++|+|++++|++++.|+.|++||+.+++++..+..|...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 204 -------~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~ 275 (372)
T 1k8k_C 204 -------WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSA 275 (372)
T ss_dssp -------CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETT
T ss_pred -------eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCc
Confidence 78889999999999999999999999999999999999999999999999999988877 899999999987
Q ss_pred -Cee--E------------------------------------EEe-cCCccceeccCCCCCCccccccceeee-cCC--
Q psy10942 486 -STC--V------------------------------------STF-DKHALKIRNSDSENDHKGFGLPRQLCS-RNS-- 522 (537)
Q Consensus 486 -~~~--~------------------------------------~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s-~~~-- 522 (537)
++. + ..+ .+|...| +++ +|+ ++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~---~~~~~~g~~ 341 (372)
T 1k8k_C 276 AGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV-----------SQI---SVLSGGKAK 341 (372)
T ss_dssp TTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE-----------EEE---EEEESTTTS
T ss_pred CceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCc-----------cee---EEecCCCcc
Confidence 421 0 222 3777777 888 866 666
Q ss_pred -CEEEEEeCCCCEEeC
Q psy10942 523 -DCEYRGGWSPQVVVY 537 (537)
Q Consensus 523 -~~l~s~~~dg~i~vW 537 (537)
++|++++.||.|++|
T Consensus 342 ~~~l~s~~~Dg~i~~W 357 (372)
T 1k8k_C 342 CSQFCTTGMDGGMSIW 357 (372)
T ss_dssp CSEEEEEETTSEEEEE
T ss_pred eeeEEEecCCCceEEE
Confidence 999999999999999
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.4e-37 Score=294.48 Aligned_cols=293 Identities=14% Similarity=0.083 Sum_probs=229.1
Q ss_pred eeeccceehhhhcCCC-cceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEee--cchhhhhhhh
Q psy10942 81 YYETSAVKELYQHGLS-SPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GFSDEILDIA 156 (537)
Q Consensus 81 ~wd~~~~~~~~~~~~~-~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~ 156 (537)
+|++.+.+....+..| +.|.+++|+|++ ++||+++.|+.|++||+.+ .+....+. +|...|.+++
T Consensus 57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----------~~~~~~~~~~~h~~~v~~~~ 125 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV-----------QNKTSFIQGMGPGDAITGMK 125 (383)
T ss_dssp HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS-----------TTCEEEECCCSTTCBEEEEE
T ss_pred cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC-----------cccceeeecCCcCCceeEEE
Confidence 4444555555555544 699999999999 9999999999999999998 45555554 6999999999
Q ss_pred cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccC
Q psy10942 157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGK 235 (537)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~ 235 (537)
|+|.+++.+++++.++. | ++||+ ...... +. ...+| ...|.++ +
T Consensus 126 ~~~~~~~~l~s~~~d~~----i-----------------~iwd~-------~~~~~~~~~--~~~~~--~~~v~~~---~ 170 (383)
T 3ei3_B 126 FNQFNTNQLFVSSIRGA----T-----------------TLRDF-------SGSVIQVFA--KTDSW--DYWYCCV---D 170 (383)
T ss_dssp EETTEEEEEEEEETTTE----E-----------------EEEET-------TSCEEEEEE--CCCCS--SCCEEEE---E
T ss_pred eCCCCCCEEEEEeCCCE----E-----------------EEEEC-------CCCceEEEe--ccCCC--CCCeEEE---E
Confidence 99547788888887777 9 99999 643333 32 11145 5889999 9
Q ss_pred cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942 236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315 (537)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 315 (537)
|+|++++|++++.|+.++ +|++... . ...
T Consensus 171 ~~~~~~~l~~~~~d~~i~--i~d~~~~--------------------------------------------~-----~~~ 199 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLL--LLGLDGH--------------------------------------------E-----IFK 199 (383)
T ss_dssp EETTTTEEEEEETTSEEE--EEETTSC--------------------------------------------E-----EEE
T ss_pred ECCCCCEEEEECCCCCEE--EEECCCC--------------------------------------------E-----EEE
Confidence 999999999998888888 8877320 1 122
Q ss_pred ccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCC---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942 316 KKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF 391 (537)
Q Consensus 316 ~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 391 (537)
+..|...|.+++|+|+++ +|++++.|+.|++||++.. ...+..+ .|..
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~--------------------------- 251 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK--------------------------- 251 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS---------------------------
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC---------------------------
Confidence 346888999999999999 9999999999999999832 2222222 2221
Q ss_pred ccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEeecCC----------------
Q psy10942 392 DKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSLEGHD---------------- 454 (537)
Q Consensus 392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------- 454 (537)
.+.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|.
T Consensus 252 ----------------------~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 309 (383)
T 3ei3_B 252 ----------------------PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHP 309 (383)
T ss_dssp ----------------------CEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECS
T ss_pred ----------------------ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccC
Confidence 789999999 99999999999999999999988877777553
Q ss_pred -cceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC--ccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942 455 -ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH--ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS 531 (537)
Q Consensus 455 -~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d 531 (537)
..+..++|+|++++ +++.|+.|++||+.+++++..+.+| ...+ ..+ +|+|++++|++++ |
T Consensus 310 ~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~-----------~~~---~~s~~g~~l~s~s-d 372 (383)
T 3ei3_B 310 MYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGII-----------SLN---KFSPTGDVLASGM-G 372 (383)
T ss_dssp SSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCC-----------CEE---EECTTSSEEEEEE-T
T ss_pred CCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceE-----------EEE---EEecCccEEEEec-C
Confidence 23444666666665 6778999999999999999999874 4566 677 9999999999997 9
Q ss_pred CCEEeC
Q psy10942 532 PQVVVY 537 (537)
Q Consensus 532 g~i~vW 537 (537)
|.|+||
T Consensus 373 ~~i~iw 378 (383)
T 3ei3_B 373 FNILIW 378 (383)
T ss_dssp TEEEEE
T ss_pred CcEEEE
Confidence 999998
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.9e-36 Score=293.90 Aligned_cols=305 Identities=21% Similarity=0.346 Sum_probs=242.0
Q ss_pred hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942 90 LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA 168 (537)
Q Consensus 90 ~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 168 (537)
...+..| +.+.. +++++|++|++++.|+.|++||+.+ ++....+.+|...|.+++|+ ++.++++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~-----------~~~~~~~~~h~~~v~~~~~~---~~~l~s~ 175 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT-----------GKCLRTLVGHTGGVWSSQMR---DNIIISG 175 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT-----------CCEEEECCCCSSCEEEEEEE---TTEEEEE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCC-----------CcEEEEEcCCCCCEEEEEec---CCEEEEE
Confidence 3444444 34433 3666799999999999999999998 78889999999999999997 5678888
Q ss_pred eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942 169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ 246 (537)
Q Consensus 169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~ 246 (537)
+.++. | ++||+ .+++.. +. +| ...|.++ .++ ++.++++
T Consensus 176 ~~dg~----i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~~--~~~l~s~ 215 (445)
T 2ovr_B 176 STDRT----L-----------------KVWNA-------ETGECIHTLY-----GH--TSTVRCM---HLH--EKRVVSG 215 (445)
T ss_dssp ETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EEE--TTEEEEE
T ss_pred eCCCe----E-----------------EEEEC-------CcCcEEEEEC-----CC--CCcEEEE---Eec--CCEEEEE
Confidence 77766 9 99999 777766 66 89 9999999 763 4567777
Q ss_pred cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV 326 (537)
Q Consensus 247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (537)
+.|+.++ +|++.. ++. ...+.+|...|.++
T Consensus 216 s~dg~i~--~wd~~~-------------------------------------------~~~-----~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 216 SRDATLR--VWDIET-------------------------------------------GQC-----LHVLMGHVAAVRCV 245 (445)
T ss_dssp ETTSEEE--EEESSS-------------------------------------------CCE-----EEEEECCSSCEEEE
T ss_pred eCCCEEE--EEECCC-------------------------------------------CcE-----EEEEcCCcccEEEE
Confidence 7766666 666654 222 12234577778888
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--------CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942 327 TVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 398 (537)
Q Consensus 327 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 398 (537)
+| +++++++++.|+.|++||+. ..+.+..+..|. ++..+++++.|+.|++||+++++.+..+..|..
T Consensus 246 ~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-- 320 (445)
T 2ovr_B 246 QY--DGRRVVSGAYDFMVKVWDPE-TETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-- 320 (445)
T ss_dssp EE--CSSCEEEEETTSCEEEEEGG-GTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCS--
T ss_pred EE--CCCEEEEEcCCCEEEEEECC-CCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc--
Confidence 87 67788888888888888887 555555555443 367788888888888888888888888777765
Q ss_pred EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec---CCcceEEEEEecCCCEEEEEeCC
Q psy10942 399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG---HDASVLRCHFINKGTQIVSTGAD 475 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d 475 (537)
.+.++.+ +++++++++.||.|++||+.+++.+..+.. |...|++++|+ +++|++++.|
T Consensus 321 ---------------~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~d 381 (445)
T 2ovr_B 321 ---------------LTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDD 381 (445)
T ss_dssp ---------------CEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETT
T ss_pred ---------------cEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCC
Confidence 3444444 466899999999999999999999999986 88899999995 5799999999
Q ss_pred CcEEEEECCCCeeEEEe-----cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC----EEeC
Q psy10942 476 GLLKLWSIKTSTCVSTF-----DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ----VVVY 537 (537)
Q Consensus 476 g~v~vwd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~----i~vW 537 (537)
|.|++||+.+++.+..+ .+|...| +++ +|+|++.+|++++.||. |.||
T Consensus 382 g~v~iwd~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~la~~~~dg~~~~~l~v~ 438 (445)
T 2ovr_B 382 GTVKLWDLKTGEFIRNLVTLESGGSGGVV-----------WRI---RASNTKLVCAVGSRNGTEETKLLVL 438 (445)
T ss_dssp SEEEEEETTTCCEEEEEEECTTGGGTCEE-----------EEE---EECSSEEEEEEECSSSSSCCEEEEE
T ss_pred CeEEEEECCCCceeeeeeccccCCCCceE-----------EEE---EecCCEEEEEEcccCCCCccEEEEE
Confidence 99999999999999888 4677788 888 99999999999999998 8776
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.1e-36 Score=310.05 Aligned_cols=295 Identities=20% Similarity=0.239 Sum_probs=233.0
Q ss_pred CcceEEEEEeccc-cEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 96 SSPLVRIVRSSVK-RMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 96 ~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
.+.|++++|+|++ ++|++|+.|++|++||+..... ......+.+.+|...|.+++|+ +++++|++++.++.
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~------~~~~~~~~~~~h~~~v~~v~~s-~~g~~l~sgs~Dg~- 453 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK------AYGVAQRRLTGHSHFVEDVVLS-SDGQFALSGSWDGE- 453 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT------CSCEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSE-
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc------ccccccceecCCCCcEEEEEEC-CCCCEEEEEeCCCc-
Confidence 3689999999875 6899999999999999976311 1134567889999999999999 78889988888877
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST 252 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i 252 (537)
| ++||+ .++... +. +| ...|.++ +|+|++++|++++.|++|
T Consensus 454 ---v-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~~---~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 454 ---L-----------------RLWDL-------AAGVSTRRFV-----GH--TKDVLSV---AFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp ---E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE---EECTTSSCEEEEETTSCE
T ss_pred ---E-----------------EEEEC-------CCCcceeEEe-----CC--CCCEEEE---EEeCCCCEEEEEeCCCEE
Confidence 9 99999 777665 67 99 9999999 999999999999999999
Q ss_pred eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942 253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND 332 (537)
Q Consensus 253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 332 (537)
+ +|+..... .. .+ .....+|...|.+++|+|++
T Consensus 497 ~--iwd~~~~~--------------------------------~~---~~----------~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 497 K--LWNTLGEC--------------------------------KY---TI----------SEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp E--EECTTSCE--------------------------------EE---EE----------CSSTTSCSSCEEEEEECSCS
T ss_pred E--EEECCCCc--------------------------------ce---ee----------ccCCCCCCCcEEEEEEeCCC
Confidence 9 99875410 00 00 11234688899999999986
Q ss_pred --CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCce
Q psy10942 333 --KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410 (537)
Q Consensus 333 --~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 410 (537)
..|++++.|+.|++||++ ..+....+..|..
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~-~~~~~~~~~~h~~---------------------------------------------- 562 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLS-NCKLRSTLAGHTG---------------------------------------------- 562 (694)
T ss_dssp SSCEEEEEETTSCEEEEETT-TCCEEEEECCCSS----------------------------------------------
T ss_pred CcceEEEEeCCCeEEEEECC-CCcEEEEEcCCCC----------------------------------------------
Confidence 578999999999999987 4444444444433
Q ss_pred EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942 411 ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490 (537)
Q Consensus 411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 490 (537)
.|.+++|+|++++|++|+.||.|++||+.+++.+..+.. ...|.+++|+|++.+|++++ |+.|++||+++++.+.
T Consensus 563 ---~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 563 ---YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp ---CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred ---CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh
Confidence 788999999999999999999999999999999888874 56799999999998888776 5569999999999988
Q ss_pred EecCCccceeccCC-----C---CCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 491 TFDKHALKIRNSDS-----E---NDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 491 ~~~~~~~~i~~~~~-----~---~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.+..+......... . .....+++ +|||||++|++++.||.|+||
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 638 DLKVDLKAEAEKADNSGPAATKRKVIYCTSL---NWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp EECCCCC----------------CCCCEEEE---EECTTSSEEEEEETTSEEEEE
T ss_pred hhccccccccccccccccccCCceeEEeeeE---EEcCCCCEEEEEcCCCeEEEE
Confidence 87654321100000 0 00001455 999999999999999999999
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.7e-36 Score=288.92 Aligned_cols=298 Identities=14% Similarity=0.136 Sum_probs=239.0
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC----C---ccEEE
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE----D---SHIVV 167 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~---~~l~~ 167 (537)
+.+.|.+++|+| ++|++++.|+.|++||+.+... ..+......+.+|...|.+++|+ ++ + .+|++
T Consensus 15 h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 15 HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFVHKSGLHHVDVL-QAIERDAFELCLVAT 86 (397)
T ss_dssp SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT-----CCGGGGEEEEECCTTCEEEEEEE-EEEETTTEEEEEEEE
T ss_pred hhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc-----ccCCCcceEEecCCCcEEEEEEe-cccccCCccccEEEE
Confidence 336999999999 7999999999999999998310 11123678888999999999999 55 7 78888
Q ss_pred eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc-----c--ccccccccCCCc-----CeEEEEeccC
Q psy10942 168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-----Q--KHNTERLGRDEL-----KTVTLLERGK 235 (537)
Q Consensus 168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-----~--l~~~~~~~h~~~-----~~v~~~~~~~ 235 (537)
++.++. | ++||+ .+.+. . +. +| . ..|.++ +
T Consensus 87 ~~~dg~----i-----------------~iw~~-------~~~~~~~~~~~~~~~-----~~--~~~~~~~~v~~~---~ 128 (397)
T 1sq9_A 87 TSFSGD----L-----------------LFYRI-------TREDETKKVIFEKLD-----LL--DSDMKKHSFWAL---K 128 (397)
T ss_dssp EETTSC----E-----------------EEEEE-------EECTTTCCEEEEEEC-----CS--CTTGGGSCEEEE---E
T ss_pred EcCCCC----E-----------------EEEEc-------cCCcccccccceeec-----cc--ccccCCCcEEEE---E
Confidence 877766 9 99999 76664 3 44 66 5 889999 9
Q ss_pred cc----cCCCe-eeeccCCCcceeccccccCCCcc--cccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee
Q psy10942 236 TV----KEEDL-FPRQSMEPSTLEELEKRKTYHFP--LFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL 308 (537)
Q Consensus 236 ~s----~~~~~-l~~~~~d~~i~~~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~ 308 (537)
|+ |++++ |++++.|+.++ +|++...... ... .. +.. ...+.+.
T Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~~~~~~-----~~-~~~------~~~~~~~---------------- 178 (397)
T 1sq9_A 129 WGASNDRLLSHRLVATDVKGTTY--IWKFHPFADESNSLT-----LN-WSP------TLELQGT---------------- 178 (397)
T ss_dssp EECCC----CEEEEEEETTSCEE--EEEEESSSSHHHHTT-----TC-CCC------EEEEEEE----------------
T ss_pred EeeccCCCCceEEEEEeCCCcEE--EEeCCccccccccce-----ee-ccC------cceeeee----------------
Confidence 99 99999 99999999999 9998872110 000 00 000 0000000
Q ss_pred eeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe---c---CCCCEEEEEcCCCcEEEEEC
Q psy10942 309 LNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG---H---KKGTQIVSTGADGLLKLWSI 382 (537)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~---~~~~~l~~~~~d~~i~i~d~ 382 (537)
......|...|.+++|+|++ +|++++.|+.|++||++ ..+.+..+.. | ..
T Consensus 179 ----~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~h~~~~~------------------ 234 (397)
T 1sq9_A 179 ----VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS-TLRPLYNFESQHSMINNSN------------------ 234 (397)
T ss_dssp ----ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT-TTEEEEEEECCC---CCCC------------------
T ss_pred ----eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC-CCceeEEEeccccccccCC------------------
Confidence 01124578889999999999 99999999999999998 5566655554 3 22
Q ss_pred CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC---CcEEEEECCCceeeeEeec-------
Q psy10942 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD---ATIKLWCLTDYVCLKSLEG------- 452 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~------- 452 (537)
.+.+++|+|++++|++++.| +.|++||+.+++.+..+.+
T Consensus 235 -------------------------------~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 235 -------------------------------SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 283 (397)
T ss_dssp -------------------------------CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred -------------------------------ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccc
Confidence 78999999999999999999 9999999999999999998
Q ss_pred ------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec------CC---------------ccceeccCCC
Q psy10942 453 ------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD------KH---------------ALKIRNSDSE 505 (537)
Q Consensus 453 ------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~------~~---------------~~~i~~~~~~ 505 (537)
|...|.+++|+|++++|++++.||.|++||+.+++.+..+. +| ...|
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v------ 357 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV------ 357 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE------
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCce------
Confidence 99999999999999999999999999999999999999999 77 7778
Q ss_pred CCCccccccceeeecCC----------CEEEEEeCCCCEEeC
Q psy10942 506 NDHKGFGLPRQLCSRNS----------DCEYRGGWSPQVVVY 537 (537)
Q Consensus 506 ~~~~~~~~~~~~~s~~~----------~~l~s~~~dg~i~vW 537 (537)
.++ +|+|++ ++|++++.||.|++|
T Consensus 358 -----~~~---~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 358 -----FDV---KFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp -----EEE---EEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred -----eEE---EeccccccccccccccceEEEecCCCcEEEE
Confidence 888 999999 799999999999998
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-35 Score=290.95 Aligned_cols=317 Identities=19% Similarity=0.185 Sum_probs=248.2
Q ss_pred hcCCC-cc-eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942 92 QHGLS-SP-LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 92 ~~~~~-~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
.+..| +. +.++.+ ++++|++|+.|+.|++||+.+ .+.+..+.+|.+.|.+++|+ +++ .+++++
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~-----------~~~~~~~~~h~~~V~~l~~~-~~~-~l~s~s 180 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN-----------KKFLLQLSGHDGGVWALKYA-HGG-ILVSGS 180 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT-----------TEEEEEECCCSSCEEEEEEC-STT-EEEEEE
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC-----------CcEEEEEeCCCcCEEEEEEc-CCC-EEEEEe
Confidence 34444 34 455554 678999999999999999998 78889999999999999998 444 777777
Q ss_pred eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcc--cCCCeeee
Q psy10942 170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTV--KEEDLFPR 245 (537)
Q Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s--~~~~~l~~ 245 (537)
.++. | ++||+ +++++. +. +| ...|.++ +|+ ++++++++
T Consensus 181 ~dg~----i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~l---~~~~~~~~~~l~s 222 (464)
T 3v7d_B 181 TDRT----V-----------------RVWDI-------KKGCCTHVFE-----GH--NSTVRCL---DIVEYKNIKYIVT 222 (464)
T ss_dssp TTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EEEESSSCEEEEE
T ss_pred CCCC----E-----------------EEEEC-------CCCcEEEEEC-----CC--CCccEEE---EEecCCCCCEEEE
Confidence 7766 9 99999 777766 66 89 9999999 888 57899999
Q ss_pred ccCCCcceeccccccCCCccccccccc--------------ccceeeeeeCC--cc----eEEEEEeCCCeEEEEECCCC
Q psy10942 246 QSMEPSTLEELEKRKTYHFPLFGIFVP--------------EAEHGAFYTGG--TV----ELLASGSLDKTVKVWSTTGG 305 (537)
Q Consensus 246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~--------------~~~~~~~~~~~--~v----~~l~~~~~d~~i~i~~~~~~ 305 (537)
++.|+.++ +|++............. ....+.+|... ++ +.+++++.|+.|++||+.++
T Consensus 223 ~s~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 223 GSRDNTLH--VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM 300 (464)
T ss_dssp EETTSCEE--EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred EcCCCcEE--EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999999 99998754221100000 01122223221 11 68999999999999999988
Q ss_pred ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS 385 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 385 (537)
+.. ..+.+|...|.+++|+|+++++++++.|+.|++||+. ..+.+..+..|..
T Consensus 301 ~~~-----~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~--------------------- 353 (464)
T 3v7d_B 301 KCL-----YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE-NGELMYTLQGHTA--------------------- 353 (464)
T ss_dssp EEE-----EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEEECCCSS---------------------
T ss_pred cEE-----EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCcEEEEEeCCCC---------------------
Confidence 763 4457899999999999999999999999999999998 5555555544433
Q ss_pred eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecC
Q psy10942 386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINK 465 (537)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~ 465 (537)
.+.+++|+ +++|++++.||.|++||+.+++...... |...+..++|+|+
T Consensus 354 ----------------------------~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 354 ----------------------------LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVS 402 (464)
T ss_dssp ----------------------------CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEEC
T ss_pred ----------------------------cEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeC
Confidence 67777776 4799999999999999999987766665 6677888999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 466 GTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 466 ~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+++|++++ ||.|++||+++++.+.. +..|...| .++ +|+ +..++++++.||.+.+|
T Consensus 403 ~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v-----------~~v---~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 403 DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQI-----------WSV---NFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEE-----------EEE---EEE-TTEEEEEEEETTEEEEE
T ss_pred CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcE-----------EEE---Eec-CCEEEEEEEeCCeEEEE
Confidence 99999998 89999999999999886 66788888 888 997 44455566677776654
No 59
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-35 Score=279.09 Aligned_cols=299 Identities=13% Similarity=0.079 Sum_probs=203.6
Q ss_pred cceEEEEEeccccEEEEEeC-------CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942 97 SPLVRIVRSSVKRMYAVVTA-------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
-+|.+++|+||+++||+|+. ++.|++|++........... .......+.+|...|.+++++ ++.++++.
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~-~~~~~~~l~~~~~~v~s~~~~---~~~~~~g~ 90 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQF-HILSEFALEDNDDSPTAIDAS---KGIILVGC 90 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHE-EEEEEEECCTTSCCCCEEEEE---TTEEEEEC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeee-eeeeEEEccCCCCceEEEEeC---CCEEEEEE
Confidence 47999999999999999875 34699999986422110000 011122466788888887765 55666666
Q ss_pred eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhc----cccccc------ccccccccCCCcCeEEEEeccCcccC
Q psy10942 170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFK----QSSSQQ------KHNTERLGRDELKTVTLLERGKTVKE 239 (537)
Q Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~----~~~~~~------l~~~~~~~h~~~~~v~~~~~~~~s~~ 239 (537)
.+.. . ++|+.......+ ...... ........+ ...+.++ +|+||
T Consensus 91 ~~~~----~-----------------~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v---~fSpD 144 (365)
T 4h5i_A 91 NENS----T-----------------KITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNA--DDYTKLV---YISRE 144 (365)
T ss_dssp CCCH----H-----------------HHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCT--TCCEEEE---EECTT
T ss_pred CCCc----c-----------------EEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCc--ccCEEEE---EEcCC
Confidence 5554 5 555540000000 111100 000011133 4557777 78888
Q ss_pred CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942 240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH 319 (537)
Q Consensus 240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 319 (537)
|+++++++ ++.|++|++||+++++.... + .|
T Consensus 145 g~~la~as-------------------------------------------~~~d~~i~iwd~~~~~~~~~-----~-~~ 175 (365)
T 4h5i_A 145 GTVAAIAS-------------------------------------------SKVPAIMRIIDPSDLTEKFE-----I-ET 175 (365)
T ss_dssp SSCEEEEE-------------------------------------------SCSSCEEEEEETTTTEEEEE-----E-EC
T ss_pred CCEEEEEE-------------------------------------------CCCCCEEEEeECCCCcEEEE-----e-CC
Confidence 87765322 22344455555555443221 1 36
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942 320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399 (537)
Q Consensus 320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 399 (537)
...|.+++|+|||+++++++.+ .+.+|+........... ...|..
T Consensus 176 ~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~-------------------------------~~~~~~--- 220 (365)
T 4h5i_A 176 RGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT-------------------------------DFDKNW--- 220 (365)
T ss_dssp SSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC-------------------------------CCCTTE---
T ss_pred CCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee-------------------------------cCCCCC---
Confidence 6789999999999999998855 46666665232221111 111221
Q ss_pred EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC----cEEEEECCCcee----eeEeecCCcceEEEEEecCCCEEEE
Q psy10942 400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDA----TIKLWCLTDYVC----LKSLEGHDASVLRCHFINKGTQIVS 471 (537)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~s 471 (537)
.+.+++|+|+++++++++.|+ .+++|++..... ...+.+|...|++++|+|||++||+
T Consensus 221 --------------~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 221 --------------SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp --------------EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred --------------CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE
Confidence 688899999999999998887 688898876543 4567789999999999999999999
Q ss_pred EeCCCcEEEEECCCCeeEEEe-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 472 TGADGLLKLWSIKTSTCVSTF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 472 ~~~dg~v~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
|+.|++|+|||+++++++..+ .+|...| +++ +|||||++|||++.|++||||
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~V-----------~~v---~fSpdg~~laS~S~D~tvrvw 339 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFKQAHSFAI-----------TEV---TISPDSTYVASVSAANTIHII 339 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEETTSSSSCE-----------EEE---EECTTSCEEEEEETTSEEEEE
T ss_pred EcCCCEEEEEECCCCcEEEEecCcccCCE-----------EEE---EECCCCCEEEEEeCCCeEEEE
Confidence 999999999999999999875 7899999 999 999999999999999999998
No 60
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.1e-35 Score=289.73 Aligned_cols=292 Identities=19% Similarity=0.293 Sum_probs=242.8
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
++.++++++.||.|++||+.+++.+..+..| +.|.+++|+ +++|++++.|+.|++||+.+ ++....
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~-----------~~~~~~ 194 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET-----------GECIHT 194 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-----------TEEEEE
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc-----------CcEEEE
Confidence 4468999999999999999999999888866 689999997 56899999999999999998 688889
Q ss_pred eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942 145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR 222 (537)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h 222 (537)
+.+|...|.+++|+ ++.+++++.++. | ++||+ .+++.. +. +|
T Consensus 195 ~~~h~~~v~~~~~~---~~~l~s~s~dg~----i-----------------~~wd~-------~~~~~~~~~~-----~~ 238 (445)
T 2ovr_B 195 LYGHTSTVRCMHLH---EKRVVSGSRDAT----L-----------------RVWDI-------ETGQCLHVLM-----GH 238 (445)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEES-------SSCCEEEEEE-----CC
T ss_pred ECCCCCcEEEEEec---CCEEEEEeCCCE----E-----------------EEEEC-------CCCcEEEEEc-----CC
Confidence 99999999999997 566888887777 9 99999 777766 66 89
Q ss_pred CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
...|.++ ++ +++++++++.|+.++ +|++..+
T Consensus 239 --~~~v~~~---~~--~~~~l~~~~~dg~i~--iwd~~~~---------------------------------------- 269 (445)
T 2ovr_B 239 --VAAVRCV---QY--DGRRVVSGAYDFMVK--VWDPETE---------------------------------------- 269 (445)
T ss_dssp --SSCEEEE---EE--CSSCEEEEETTSCEE--EEEGGGT----------------------------------------
T ss_pred --cccEEEE---EE--CCCEEEEEcCCCEEE--EEECCCC----------------------------------------
Confidence 9999999 77 677888888888888 7776652
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC--------CCEEEEEcCC
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GTQIVSTGAD 374 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~l~~~~~d 374 (537)
+. ...+..|...|.+++| +++++++++.|+.|++||+. ..+.+..+..|.. +..+++++.|
T Consensus 270 ---~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 338 (445)
T 2ovr_B 270 ---TC-----LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE-TGNCIHTLTGHQSLTSGMELKDNILVSGNAD 338 (445)
T ss_dssp ---EE-----EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT-TCCEEEEECCCCSCEEEEEEETTEEEEEETT
T ss_pred ---cE-----eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC-CCCEEEEEcCCcccEEEEEEeCCEEEEEeCC
Confidence 11 1223456777888888 67888888888899999888 5566666655543 6788888889
Q ss_pred CcEEEEECCCCeeeeeecc---CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEe-
Q psy10942 375 GLLKLWSIKTSTCVSTFDK---HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL- 450 (537)
Q Consensus 375 ~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~- 450 (537)
|.|++||+++++.+..+.. |.. .|.+++|+ +++|++|+.||.|++||+.+++.+..+
T Consensus 339 g~i~vwd~~~~~~~~~~~~~~~~~~-----------------~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQTLQGPNKHQS-----------------AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp SCEEEEETTTCCEEEEECSTTSCSS-----------------CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCCcEEEEEccCCCCCC-----------------CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 9999999988888877765 443 67777775 579999999999999999999998888
Q ss_pred ----ecCCcceEEEEEecCCCEEEEEeCCCc----EEEEECCC
Q psy10942 451 ----EGHDASVLRCHFINKGTQIVSTGADGL----LKLWSIKT 485 (537)
Q Consensus 451 ----~~~~~~v~~~~~s~~~~~l~s~~~dg~----v~vwd~~~ 485 (537)
.+|.+.|.+++|+|++.+|++++.||+ |.+||++.
T Consensus 400 ~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 400 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 468889999999999999999999998 99999864
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-35 Score=278.97 Aligned_cols=301 Identities=13% Similarity=0.150 Sum_probs=242.5
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
..|++++|+ +++++|++++.||.|++||+.+++.+..+. +...+..+ .+.| ++.++++++.|+.|++
T Consensus 33 ~~v~~~~~s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~--~~~~--------~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 33 RPLTQVKYN--KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSI--DVDC--------FTKYCVTGSADYSIKL 100 (369)
T ss_dssp SCEEEEEEC--TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEE--EECT--------TSSEEEEEETTTEEEE
T ss_pred ceEEEEEEc--CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEE--EEcC--------CCCEEEEEeCCCeEEE
Confidence 469999999 899999999999999999999999999887 56677777 5677 6689999999999999
Q ss_pred eeccceehhhhcCCCcceEEEEEeccccEEEEEeCC-----ceEEEEecccccCcccccccccceeEEeecchhhhhhhh
Q psy10942 82 YETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD-----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIA 156 (537)
Q Consensus 82 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (537)
||+.+++.+..+.....|.+++|+|++++|++++.+ +.|++||+... .....+..
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~-----------~~~~~~~~--------- 160 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD-----------SATHELTK--------- 160 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC-----------TTTCCEEE---------
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC-----------ccceeecc---------
Confidence 999999999888888899999999999999999998 99999999872 21111110
Q ss_pred cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCc
Q psy10942 157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKT 236 (537)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~ 236 (537)
..... + ..+. .|.....+.++ +|
T Consensus 161 ------------~~~~~----~---------------------------------~~~~-----~~~~~~~~~~~---~~ 183 (369)
T 3zwl_B 161 ------------VSEEP----I---------------------------------HKII-----THEGLDAATVA---GW 183 (369)
T ss_dssp ------------ECSSC----S---------------------------------EEEE-----CCTTCCCEEEE---EE
T ss_pred ------------cccce----e---------------------------------eecc-----CCcCccceeEE---EE
Confidence 00000 1 0012 34003389999 99
Q ss_pred ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942 237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK 316 (537)
Q Consensus 237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 316 (537)
+|++++|++++.|+.|+ +|++... ... ...+
T Consensus 184 ~~~~~~l~~~~~dg~i~--i~d~~~~------------------------------------------~~~-----~~~~ 214 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKIS--KYDVSNN------------------------------------------YEY-----VDSI 214 (369)
T ss_dssp CGGGCEEEEEETTSEEE--EEETTTT------------------------------------------TEE-----EEEE
T ss_pred cCCCCEEEEEcCCCEEE--EEECCCC------------------------------------------cEe-----EEEE
Confidence 99999999888888888 7777651 111 2223
Q ss_pred cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCc
Q psy10942 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396 (537)
Q Consensus 317 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 396 (537)
..|...|.+++|+|++++|++++.|+.|++||+. ..+.+..+. +..
T Consensus 215 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~-~~~-------------------------------- 260 (369)
T 3zwl_B 215 DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS-TLQVLKKYE-TDC-------------------------------- 260 (369)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEE-CSS--------------------------------
T ss_pred ecCCCceeEEEECCCCCEEEEecCCceEEEEECC-CCceeeeec-CCC--------------------------------
Confidence 4577889999999999999999999999999998 444444433 111
Q ss_pred ceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC--------------cEEEEECCCceeeeEeecCCcceEEEEE
Q psy10942 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA--------------TIKLWCLTDYVCLKSLEGHDASVLRCHF 462 (537)
Q Consensus 397 ~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 462 (537)
.+..++|+|+++++++++.++ .+++||+.+++.+..+.+|...|++++|
T Consensus 261 -----------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 323 (369)
T 3zwl_B 261 -----------------PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAI 323 (369)
T ss_dssp -----------------CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred -----------------CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEE
Confidence 778899999999999999888 8999999999999999999999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942 463 INKGTQIVSTGADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 492 (537)
+|++++|++++.||.|++|+++++.....+
T Consensus 324 s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 324 SPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp CTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred CCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 999999999999999999999876544443
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=289.85 Aligned_cols=335 Identities=17% Similarity=0.146 Sum_probs=229.9
Q ss_pred ccceEEeeeccceehhhhcCCC-cceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEe-------
Q psy10942 75 EKSLLHYYETSAVKELYQHGLS-SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF------- 145 (537)
Q Consensus 75 ~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------- 145 (537)
.++.+++|+++.++....+..| +.|.+++|+| ++++||+++.||.|++||+.++ .....+
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~-----------~~~~~~~~~~~~~ 89 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENS-----------SRQSYYTCKAVCS 89 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCC-----------SSSSCEEECEEEE
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCC-----------cccceEecccccc
Confidence 3566899999988887777755 6999999999 9999999999999999999984 222222
Q ss_pred ------ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc
Q psy10942 146 ------VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE 218 (537)
Q Consensus 146 ------~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~ 218 (537)
.+|...|.+++|+|.++..+++++.++. | ++||+ .+++.. ..
T Consensus 90 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~----i-----------------~iwd~-------~~~~~~~~~--- 138 (408)
T 4a11_B 90 IGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT----L-----------------KVWDT-------NTLQTADVF--- 138 (408)
T ss_dssp ECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE----E-----------------EEEET-------TTTEEEEEE---
T ss_pred ccccccccCCCcEEEEEEccCCCcEEEEEeCCCe----E-----------------EEeeC-------CCCccceec---
Confidence 2588999999999557778888877777 9 99999 777666 33
Q ss_pred cccCCCcCeEEEEeccCccc---CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942 219 RLGRDELKTVTLLERGKTVK---EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK 295 (537)
Q Consensus 219 ~~~h~~~~~v~~~~~~~~s~---~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~ 295 (537)
.+ ...+.++ .++| ++.++++++.|+.++ +|++..
T Consensus 139 --~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~--~~d~~~---------------------------------- 175 (408)
T 4a11_B 139 --NF--EETVYSH---HMSPVSTKHCLVAVGTRGPKVQ--LCDLKS---------------------------------- 175 (408)
T ss_dssp --EC--SSCEEEE---EECSSCSSCCEEEEEESSSSEE--EEESSS----------------------------------
T ss_pred --cC--CCceeee---EeecCCCCCcEEEEEcCCCeEE--EEeCCC----------------------------------
Confidence 45 6778888 6665 344666666666666 555544
Q ss_pred eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEccCC----------------------
Q psy10942 296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG---------------------- 352 (537)
Q Consensus 296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~---------------------- 352 (537)
++. ...+..|...|.+++|+|+++ +|++++.||.|++||++..
T Consensus 176 ---------~~~-----~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 176 ---------GSC-----SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp ---------SCC-----CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred ---------cce-----eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccc
Confidence 322 223456888899999999988 5889999999999998532
Q ss_pred ---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942 353 ---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS 429 (537)
Q Consensus 353 ---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (537)
...+..+..++++.++++++.|+.|++||+.+++....+..+..... .. .+........+..+++
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~ 309 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNS-----KK-------GLKFTVSCGCSSEFVF 309 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCC-----SS-------CCCCEECCSSSSCEEE
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccc-----cc-------cceeEEecCCCceEEE
Confidence 23466777788899999999999999999998876655433221100 00 1111222233455667
Q ss_pred EeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCc
Q psy10942 430 SSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHK 509 (537)
Q Consensus 430 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 509 (537)
++.++.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.+++.+.....+....
T Consensus 310 ~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~---------- 379 (408)
T 4a11_B 310 VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKS---------- 379 (408)
T ss_dssp EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEecc----------
Confidence 7788999999999999999999999999999999999999999999999999999988776554433222
Q ss_pred cccccceeeec-CCCEEEEEeCCCCEEeC
Q psy10942 510 GFGLPRQLCSR-NSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 510 ~~~~~~~~~s~-~~~~l~s~~~dg~i~vW 537 (537)
.+.+ ....+.+.+.|+.+++|
T Consensus 380 -------~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 380 -------QLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp -----------------------------
T ss_pred -------ccccccceeecccCccCceeec
Confidence 3333 33345567789999998
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=274.15 Aligned_cols=277 Identities=18% Similarity=0.229 Sum_probs=228.8
Q ss_pred ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEE
Q psy10942 88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIV 166 (537)
Q Consensus 88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 166 (537)
+.+..+..| +.|.+++| |++++|++++.||.|++||+.+ .+....+..|...|.+++|+ +++..++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~-----------~~~~~~~~~~~~~v~~~~~~-~~~~~l~ 75 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD-----------QWLGTVVYTGQGFLNSVCYD-SEKELLL 75 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS-----------SEEEEEEEECSSCEEEEEEE-TTTTEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC-----------CEEEEEeecCCccEEEEEEC-CCCCEEE
Confidence 455566655 69999999 9999999999999999999988 67888899999999999999 7888888
Q ss_pred EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc---cc--ccccccccCCCcCeEEEEeccCcccCCC
Q psy10942 167 VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS---QQ--KHNTERLGRDELKTVTLLERGKTVKEED 241 (537)
Q Consensus 167 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~---~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~ 241 (537)
+++.++. + ++|++ .... .. +. +| ...|.++ +| +++
T Consensus 76 ~~~~dg~----i-----------------~~~~~-------~~~~~~~~~~~~~-----~~--~~~i~~~---~~--~~~ 115 (313)
T 3odt_A 76 FGGKDTM----I-----------------NGVPL-------FATSGEDPLYTLI-----GH--QGNVCSL---SF--QDG 115 (313)
T ss_dssp EEETTSC----E-----------------EEEET-------TCCTTSCC-CEEC-----CC--SSCEEEE---EE--ETT
T ss_pred EecCCCe----E-----------------EEEEe-------eecCCCCcccchh-----hc--ccCEEEE---Ee--cCC
Confidence 8887776 8 88887 3332 22 55 88 8999999 77 566
Q ss_pred eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942 242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK 321 (537)
Q Consensus 242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 321 (537)
++++++.|+.++ +|+.. .. ...+..|..
T Consensus 116 ~l~~~~~d~~i~--~~d~~---------------------------------------------~~-----~~~~~~~~~ 143 (313)
T 3odt_A 116 VVISGSWDKTAK--VWKEG---------------------------------------------SL-----VYNLQAHNA 143 (313)
T ss_dssp EEEEEETTSEEE--EEETT---------------------------------------------EE-----EEEEECCSS
T ss_pred EEEEEeCCCCEE--EEcCC---------------------------------------------cE-----EEecccCCC
Confidence 777777777777 66611 11 222346788
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942 322 DINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT 400 (537)
Q Consensus 322 ~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 400 (537)
.+.+++|+| +++++++++.|+.|++||.. +....+... +..
T Consensus 144 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~-------------------------------~~~---- 185 (313)
T 3odt_A 144 SVWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGI-------------------------------HND---- 185 (313)
T ss_dssp CEEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSS-------------------------------CSS----
T ss_pred ceeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEecc-------------------------------Ccc----
Confidence 899999988 89999999999999999943 333333220 111
Q ss_pred EEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942 401 LAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKL 480 (537)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~v 480 (537)
.+.+++|+|++. +++++.||.|++||+.+++++..+.+|...|++++|+|++ .|++++.||.|++
T Consensus 186 -------------~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~i 250 (313)
T 3odt_A 186 -------------VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRI 250 (313)
T ss_dssp -------------CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEE
T ss_pred -------------cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEE
Confidence 788899999988 8999999999999999999999999999999999999999 5899999999999
Q ss_pred EECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 481 WSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 481 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
||+.+++++..+..|...+ .++ +|+|+++ +++++.||.|++|
T Consensus 251 wd~~~~~~~~~~~~~~~~i-----------~~~---~~~~~~~-~~~~~~dg~i~iw 292 (313)
T 3odt_A 251 WSKENGSLKQVITLPAISI-----------WSV---DCMSNGD-IIVGSSDNLVRIF 292 (313)
T ss_dssp ECTTTCCEEEEEECSSSCE-----------EEE---EECTTSC-EEEEETTSCEEEE
T ss_pred EECCCCceeEEEeccCceE-----------EEE---EEccCCC-EEEEeCCCcEEEE
Confidence 9999999999999999999 999 9999998 5678999999998
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.4e-36 Score=286.80 Aligned_cols=311 Identities=12% Similarity=0.053 Sum_probs=239.7
Q ss_pred EcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC---CCcceEEEEEec-
Q psy10942 32 DLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG---LSSPLVRIVRSS- 106 (537)
Q Consensus 32 d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~---~~~~v~~~~~s~- 106 (537)
++++.+....+. +...+.++ .+.|. +..++++++.|+.|++||+.+++....+. +.+.|.+++|+|
T Consensus 59 ~~~~~~~~~~~~~h~~~v~~~--~~~~~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~ 129 (383)
T 3ei3_B 59 SLKSYKLHRTASPFDRRVTSL--EWHPT-------HPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF 129 (383)
T ss_dssp HHTTCEEEEEECCCSSCEEEE--EECSS-------CTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT
T ss_pred cccccceEEeccCCCCCEEEE--EECCC-------CCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC
Confidence 334445555444 45666777 56773 33799999999999999999887766655 447999999999
Q ss_pred cccEEEEEeCCceEEEEecccccCcccccccccceeEEeec---chhhhhhhhcccCCCccEEEeeeccccCCcccceee
Q psy10942 107 VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG---FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVK 183 (537)
Q Consensus 107 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~ 183 (537)
++++|++++.|+.|++||+.+ .....+.. |...|.+++|+ +++..+++++.++. |
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~------------~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~----i----- 187 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSG------------SVIQVFAKTDSWDYWYCCVDVS-VSRQMLATGDSTGR----L----- 187 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTS------------CEEEEEECCCCSSCCEEEEEEE-TTTTEEEEEETTSE----E-----
T ss_pred CCCEEEEEeCCCEEEEEECCC------------CceEEEeccCCCCCCeEEEEEC-CCCCEEEEECCCCC----E-----
Confidence 789999999999999999986 23334443 44779999999 78888888887777 9
Q ss_pred cccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccC
Q psy10942 184 LGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKT 261 (537)
Q Consensus 184 ~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~ 261 (537)
++||+ ...... +. +| ...|.++ +|+|+++ ++++++.|+.|+ +|++..
T Consensus 188 ------------~i~d~-------~~~~~~~~~-----~h--~~~v~~~---~~~~~~~~~l~s~~~d~~i~--iwd~~~ 236 (383)
T 3ei3_B 188 ------------LLLGL-------DGHEIFKEK-----LH--KAKVTHA---EFNPRCDWLMATSSVDATVK--LWDLRN 236 (383)
T ss_dssp ------------EEEET-------TSCEEEEEE-----CS--SSCEEEE---EECSSCTTEEEEEETTSEEE--EEEGGG
T ss_pred ------------EEEEC-------CCCEEEEec-----cC--CCcEEEE---EECCCCCCEEEEEeCCCEEE--EEeCCC
Confidence 99998 544333 67 89 9999999 9999998 899999999999 998876
Q ss_pred CCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeC
Q psy10942 262 YHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSL 340 (537)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~ 340 (537)
.... ... ... ..|...|.+++|+| ++++|++++.
T Consensus 237 ~~~~---------------------------------------~~~-----~~~-~~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 237 IKDK---------------------------------------NSY-----IAE-MPHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp CCST---------------------------------------TCE-----EEE-EECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCcc---------------------------------------cce-----EEE-ecCCCceEEEEEcCCCCCEEEEEcC
Confidence 3210 111 111 14778899999999 9999999999
Q ss_pred CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEE
Q psy10942 341 DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF 420 (537)
Q Consensus 341 d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~ 420 (537)
|+.|++||+. .......+..|... ...+...+. ..++|++ .+..++|
T Consensus 272 d~~i~iwd~~-~~~~~~~~~~~~~~-------------------------~~~~~~~~~-~~~~p~~------~~~~~~~ 318 (383)
T 3ei3_B 272 RNEIRVYSSY-DWSKPDQIIIHPHR-------------------------QFQHLTPIK-ATWHPMY------DLIVAGR 318 (383)
T ss_dssp SSEEEEEETT-BTTSCSEEEECCBC-------------------------CCTTSCCCC-CEECSSS------SEEEEEC
T ss_pred CCcEEEEECC-CCcccccccccccc-------------------------ccccccceE-EeccCCC------CceEEEe
Confidence 9999999998 44444555544320 111223333 3566666 5666889
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCceeeeEeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 421 SPLDRILISSSGDATIKLWCLTDYVCLKSLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
+|++++ +++.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++++ |+.|++||+++
T Consensus 319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 999988 888999999999999999999987 456778889999999999997 99999999864
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.8e-36 Score=287.56 Aligned_cols=282 Identities=15% Similarity=0.191 Sum_probs=219.0
Q ss_pred EEEEEeCccceEEeeeccceehhhhcCC--C-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942 68 TFVLAGGEKSLLHYYETSAVKELYQHGL--S-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~--~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
++|++|. |+.|++||..+|+.+..+.. + +.|++++|+|+|++||+|+.|+.|++||+.+ ++.++.
T Consensus 117 n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~-----------~~~~~~ 184 (420)
T 4gga_A 117 NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-----------QKRLRN 184 (420)
T ss_dssp SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------TEEEEE
T ss_pred CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC-----------CcEEEE
Confidence 3666654 99999999999988766543 2 5799999999999999999999999999999 788999
Q ss_pred eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---cccccccc
Q psy10942 145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLG 221 (537)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~ 221 (537)
+.+|...+.+++++ +..+++++.++. + ++||. ...... +. +
T Consensus 185 ~~~h~~~v~~~s~~---~~~l~sgs~d~~----i-----------------~~~d~-------~~~~~~~~~~~-----~ 228 (420)
T 4gga_A 185 MTSHSARVGSLSWN---SYILSSGSRSGH----I-----------------HHHDV-------RVAEHHVATLS-----G 228 (420)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEET-------TSSSCEEEEEE-----C
T ss_pred EeCCCCceEEEeeC---CCEEEEEeCCCc----e-----------------eEeee-------cccceeeEEec-----c
Confidence 99999999988776 567777777766 8 88887 544333 56 8
Q ss_pred CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942 222 RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS 301 (537)
Q Consensus 222 h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~ 301 (537)
| ...+..+ .++|+++++++++.|+.++ +|+...+......
T Consensus 229 h--~~~~~~~---~~~~~g~~l~s~~~D~~v~--i~~~~~~~~~~~~--------------------------------- 268 (420)
T 4gga_A 229 H--SQEVCGL---RWAPDGRHLASGGNDNLVN--VWPSAPGEGGWVP--------------------------------- 268 (420)
T ss_dssp C--SSCEEEE---EECTTSSEEEEEETTSCEE--EEESSCCSSCSCC---------------------------------
T ss_pred c--ccceeee---eecCCCCeeeeeeccccce--EEeecccccccee---------------------------------
Confidence 9 9999999 9999999999999999999 9988763211000
Q ss_pred CCCCceeeeeecccccccCCCeEEEEEcCCCC-EEEEE--eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942 302 TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASG--SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 378 (537)
......|...|.+++|+|++. +++++ +.|+.|++||+. .......+.
T Consensus 269 -----------~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~-t~~~~~~~~------------------ 318 (420)
T 4gga_A 269 -----------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLSAVD------------------ 318 (420)
T ss_dssp -----------SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT-TTEEEEEEE------------------
T ss_pred -----------eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC-ccccceeec------------------
Confidence 223356788999999999654 44443 357777777776 444443333
Q ss_pred EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe--CCCcEEEEECCCceeeeEeecCCcc
Q psy10942 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS--GDATIKLWCLTDYVCLKSLEGHDAS 456 (537)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~ 456 (537)
.+. .+.++.|+|+++.+++++ .|+.|++||+.+++++.++.+|.+.
T Consensus 319 --------------~~~------------------~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~ 366 (420)
T 4gga_A 319 --------------AHS------------------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR 366 (420)
T ss_dssp --------------CSS------------------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred --------------ccc------------------ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 222 677888999999888765 6899999999999999999999999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499 (537)
Q Consensus 457 v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i 499 (537)
|++++|+|+|++|+||+.|++|+|||+.+..+....+.+....
T Consensus 367 V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~ 409 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASA 409 (420)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCc
Confidence 9999999999999999999999999998776666555554433
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.5e-37 Score=291.17 Aligned_cols=257 Identities=16% Similarity=0.132 Sum_probs=195.7
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCccccccccc--ceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKIL--KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
+.|.+++|+|++++||+++.|+.|++||+.+ . +....+.+|...|.+++|+ +++++|++++.++.
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~-----------~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~d~~- 78 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDG-----------NGWKHARTFSDHDKIVTCVDWA-PKSNRIVTCSQDRN- 78 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEET-----------TEEEECCCBCCCSSCEEEEEEC-TTTCCEEEEETTSS-
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccC-----------CceEEEEEEecCCceEEEEEEe-CCCCEEEEEeCCCe-
Confidence 5799999999999999999999999999998 4 6778889999999999999 77889988887777
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccc---cc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS---QQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME 249 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~---~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d 249 (537)
| ++||+ .++. .. +. +| ...|.++ +|+|++++|++++.|
T Consensus 79 ---v-----------------~vwd~-------~~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 79 ---A-----------------YVYEK-------RPDGTWKQTLVLL-----RL--NRAATFV---RWSPNEDKFAVGSGA 121 (377)
T ss_dssp ---E-----------------EEC-------------CCCCEEECC-----CC--SSCEEEE---ECCTTSSCCEEEESS
T ss_pred ---E-----------------EEEEc-------CCCCceeeeeEec-----cc--CCceEEE---EECCCCCEEEEEecC
Confidence 9 99999 6655 22 55 89 9999999 999999999999999
Q ss_pred CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc-cCCCeEEEEE
Q psy10942 250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG-HEKDINCVTV 328 (537)
Q Consensus 250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 328 (537)
+.++ +|++...... . . ...+.. |...|.+++|
T Consensus 122 ~~i~--iwd~~~~~~~-----------------------------------~-----~-----~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 122 RVIS--VCYFEQENDW-----------------------------------W-----V-----SKHLKRPLRSTILSLDW 154 (377)
T ss_dssp SCEE--ECCC-----C-----------------------------------C-----C-----CEEECSSCCSCEEEEEE
T ss_pred CeEE--EEEECCcccc-----------------------------------e-----e-----eeEeecccCCCeEEEEE
Confidence 9999 9998773100 0 0 112233 8889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942 329 SPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN 408 (537)
Q Consensus 329 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 408 (537)
+|++++|++++.|+.|++||+... ...........+. .+..++++..+ .|..
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~~~------------ 206 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVR-DVDAKPEASVWGS--------------RLPFNTVCAEY-PSGG------------ 206 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCS-SCC-CCCSCSSCS--------------CCCEEEEEECC-CCSS------------
T ss_pred cCCCCEEEEEeCCCEEEEEEEEec-ccCCCcccccccc--------------ccchhhhhhcc-cCCc------------
Confidence 999999999999999999999622 1110000000000 00122333344 4443
Q ss_pred ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee----eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC----LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
.+.+++|+|++++|++++.||.|++||+.+++. +..+.+|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 207 -----~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 207 -----WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -----SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred -----eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 788899999999999999999999999999877 88899999999999999999999998766655 77654
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.8e-34 Score=277.18 Aligned_cols=314 Identities=13% Similarity=0.148 Sum_probs=233.3
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccc------eeeeec-cccccceeeeEeecCccccccCC----c---E
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK------QLRSYP-AYESLETCAVFHLSDETESKSGG----K---T 68 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~---~ 68 (537)
..|+|++|+ + ++|++++.||.|++||+++++ .+..+. +..++..+ .+.| + + .
T Consensus 17 ~~i~~~~~~--~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~--------~~~~~g~~~~ 82 (397)
T 1sq9_A 17 ADIFSVSAC--N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV--DVLQ--------AIERDAFELC 82 (397)
T ss_dssp SCEEEEEEC--S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEE--EEEE--------EEETTTEEEE
T ss_pred cCeEEEEec--C--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEE--EEec--------ccccCCcccc
Confidence 479999999 5 799999999999999999988 555554 56677777 5566 5 7 8
Q ss_pred EEEEeCccceEEeeeccceeh-----hhhcCCC------cceEEEEEe----ccccE-EEEEeCCceEEEEecccccCcc
Q psy10942 69 FVLAGGEKSLLHYYETSAVKE-----LYQHGLS------SPLVRIVRS----SVKRM-YAVVTADHNISLYRLNSETGLE 132 (537)
Q Consensus 69 ~~~~~~~~~~i~~wd~~~~~~-----~~~~~~~------~~v~~~~~s----~~~~~-la~~~~d~~i~iwd~~~~~~~~ 132 (537)
++++++.|+.|++||+.+++. +..+..+ +.|.+++|+ |++++ |++++.|+.|++||+.+.
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---- 158 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF---- 158 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS----
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc----
Confidence 999999999999999999887 7777766 799999999 99999 999999999999999871
Q ss_pred cccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc
Q psy10942 133 ERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ 212 (537)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~ 212 (537)
.. ...-..+.|.| ... + .+. + .
T Consensus 159 -------~~-------~~~~~~~~~~~-~~~-~-~~~--------~---------------------------------~ 180 (397)
T 1sq9_A 159 -------AD-------ESNSLTLNWSP-TLE-L-QGT--------V---------------------------------E 180 (397)
T ss_dssp -------SS-------HHHHTTTCCCC-EEE-E-EEE--------E---------------------------------C
T ss_pred -------cc-------ccccceeeccC-cce-e-eee--------e---------------------------------c
Confidence 11 01112222431 111 1 000 0 0
Q ss_pred cccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe
Q psy10942 213 QKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS 292 (537)
Q Consensus 213 ~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 292 (537)
... .| ...|.++ +|+|++ ++++++.|+.++ +|++....
T Consensus 181 ~~~-----~~--~~~i~~~---~~~~~~-~l~~~~~dg~i~--i~d~~~~~----------------------------- 218 (397)
T 1sq9_A 181 SPM-----TP--SQFATSV---DISERG-LIATGFNNGTVQ--ISELSTLR----------------------------- 218 (397)
T ss_dssp CSS-----SS--CCCCCEE---EECTTS-EEEEECTTSEEE--EEETTTTE-----------------------------
T ss_pred ccc-----CC--CCCceEE---EECCCc-eEEEEeCCCcEE--EEECCCCc-----------------------------
Confidence 012 57 8889999 999999 999999999888 88887621
Q ss_pred CCCeEEEEECCCCceeeeeeccccccc---CCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCceeeEEEEecCCCC
Q psy10942 293 LDKTVKVWSTTGGLKLLNVLRGHKKGH---EKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLKLLNVLRGHKKGT 366 (537)
Q Consensus 293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~ 366 (537)
.+..+.. ...| ...|.+++|+|++++|++++.| +.|++||+. ..+.+..+.......
T Consensus 219 ---~~~~~~~-------------~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~-~~~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 219 ---PLYNFES-------------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE-FGERIGSLSVPTHSS 281 (397)
T ss_dssp ---EEEEEEC-------------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT-TCCEEEEECBC----
T ss_pred ---eeEEEec-------------cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC-CCcccceeccCcccc
Confidence 0111110 0126 7889999999999999999999 999999998 555555554311100
Q ss_pred EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee
Q psy10942 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC 446 (537)
Q Consensus 367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 446 (537)
. .......|.. .+.+++|+|++++|++++.||.|++||+.+++.
T Consensus 282 ~-------------------~~~~~~~~~~-----------------~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 282 Q-------------------ASLGEFAHSS-----------------WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp -----------------------CCBSBSS-----------------CEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred c-------------------ccccccccCC-----------------cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 0 0000001222 788999999999999999999999999999999
Q ss_pred eeEee------cC---------------CcceEEEEEecCC----------CEEEEEeCCCcEEEEECCCCe
Q psy10942 447 LKSLE------GH---------------DASVLRCHFINKG----------TQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 447 ~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~s~~~dg~v~vwd~~~~~ 487 (537)
+..+. +| ...|++++|+|++ ++|++++.||.|++|++++|+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 99999 88 9999999999998 799999999999999998764
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.5e-35 Score=277.09 Aligned_cols=287 Identities=11% Similarity=0.135 Sum_probs=222.8
Q ss_pred CCcceEEEEEeccccEE-EEEeC---CceEEEEecccccCcccccccccceeE-EeecchhhhhhhhcccCC--CccEEE
Q psy10942 95 LSSPLVRIVRSSVKRMY-AVVTA---DHNISLYRLNSETGLEERPNKILKFRK-QFVGFSDEILDIALLGEE--DSHIVV 167 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~l-a~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~~l~~ 167 (537)
+.+.|.+++|+|++..+ ++++. |+.|++||+.+ .+... ...+|...|.+++|+|.. +..+++
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH-----------GDLKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS-----------SSEEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC-----------CcccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 44689999999999655 55555 89999999998 34333 334788899999999532 688888
Q ss_pred eeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-cc--ccccccccCCCcCeEEEEecc---CcccCCC
Q psy10942 168 ASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-QQ--KHNTERLGRDELKTVTLLERG---KTVKEED 241 (537)
Q Consensus 168 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-~~--l~~~~~~~h~~~~~v~~~~~~---~~s~~~~ 241 (537)
++.++. | ++||+ .+.+ .. +. +| ...|.++.+. +|+|+++
T Consensus 86 ~~~dg~----i-----------------~iwd~-------~~~~~~~~~~~-----~~--~~~v~~~~~~~~~~~s~~~~ 130 (357)
T 3i2n_A 86 GDFGGN----L-----------------HIWNL-------EAPEMPVYSVK-----GH--KEIINAIDGIGGLGIGEGAP 130 (357)
T ss_dssp EETTSC----E-----------------EEECT-------TSCSSCSEEEC-----CC--SSCEEEEEEESGGGCC-CCC
T ss_pred ecCCCe----E-----------------EEEeC-------CCCCccEEEEE-----ec--ccceEEEeeccccccCCCcc
Confidence 887777 9 99999 7666 33 66 89 9999999432 3578888
Q ss_pred eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC
Q psy10942 242 LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK 321 (537)
Q Consensus 242 ~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 321 (537)
+|++++.|+.++ +|++...... +..+... ...+..
T Consensus 131 ~l~~~~~d~~i~--vwd~~~~~~~-------------------------------~~~~~~~------------~~~~~~ 165 (357)
T 3i2n_A 131 EIVTGSRDGTVK--VWDPRQKDDP-------------------------------VANMEPV------------QGENKR 165 (357)
T ss_dssp EEEEEETTSCEE--EECTTSCSSC-------------------------------SEEECCC------------TTSCCC
T ss_pred EEEEEeCCCeEE--EEeCCCCCCc-------------------------------ceecccc------------CCCCCC
Confidence 899888888888 8888763210 1111111 111234
Q ss_pred CeEEEE----EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942 322 DINCVT----VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK 397 (537)
Q Consensus 322 ~v~~~~----~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 397 (537)
.+.+++ |+|++++|++++.|+.|++||++ ..+... ...+..
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~-~~~~~~--------------------------------- 210 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR-NMALRW-ETNIKN--------------------------------- 210 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETT-TTEEEE-EEECSS---------------------------------
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECc-cCceee-ecCCCC---------------------------------
Confidence 678887 78899999999999999999998 433322 122222
Q ss_pred eEEEEEecCCCceEEeeeeEEEEcC---CCCEEEEEeCCCcEEEEECCCceeeeEee-----cCCcceEEEEEecCCC-E
Q psy10942 398 IWTLAITKDENQIITGGVWFVNFSP---LDRILISSSGDATIKLWCLTDYVCLKSLE-----GHDASVLRCHFINKGT-Q 468 (537)
Q Consensus 398 i~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~s~~~~-~ 468 (537)
.+.+++|+| ++++|++++.||.|++||+.+++....+. +|...|++++|+|+++ +
T Consensus 211 ----------------~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (357)
T 3i2n_A 211 ----------------GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNREL 274 (357)
T ss_dssp ----------------CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred ----------------ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcE
Confidence 788899999 89999999999999999999877666555 8999999999999998 8
Q ss_pred EEEEeCCCcEEEEECCCC-------------------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEE-EE
Q psy10942 469 IVSTGADGLLKLWSIKTS-------------------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEY-RG 528 (537)
Q Consensus 469 l~s~~~dg~v~vwd~~~~-------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~-s~ 528 (537)
|++++.||.|++||++++ +.+..+.+|...| .++ +|+|++++|+ ++
T Consensus 275 l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 275 FLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI-----------SSL---DWSPDKRGLCVCS 340 (357)
T ss_dssp EEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE-----------EEE---EECSSSTTEEEEE
T ss_pred EEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe-----------eEE---EEcCCCCeEEEEe
Confidence 999999999999998754 4677888999999 999 9999999998 89
Q ss_pred eCCCCEEeC
Q psy10942 529 GWSPQVVVY 537 (537)
Q Consensus 529 ~~dg~i~vW 537 (537)
+.||.|+||
T Consensus 341 ~~d~~i~iw 349 (357)
T 3i2n_A 341 SFDQTVRVL 349 (357)
T ss_dssp ETTSEEEEE
T ss_pred cCCCcEEEE
Confidence 999999998
No 69
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=296.46 Aligned_cols=311 Identities=11% Similarity=0.084 Sum_probs=234.9
Q ss_pred EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhhhcccCCCccEEEeeeccccCCcccce
Q psy10942 103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGL 181 (537)
Q Consensus 103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~ 181 (537)
.|+|+++.+++++ .|+.. ++++..+ .+|.+.|.+++|+|.++.+|++++.++. |
T Consensus 34 ~f~~~~~~~~~~~------~w~~~------------g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~----v--- 88 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR------------GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGV----I--- 88 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC------------CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSE----E---
T ss_pred hcCCccccccccc------ccccc------------ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCce----E---
Confidence 3688888887655 37744 4677778 8899999999999328889988887777 9
Q ss_pred eecccCCCcchhhHHHHHHHHHhhhccc---ccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccc
Q psy10942 182 VKLGANRSHNEWFDKTFERILEAKFKQS---SSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEK 258 (537)
Q Consensus 182 ~~~~~~~~~~~~~~~~wd~~~~~~~~~~---~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~ 258 (537)
++||+ .+ .... ......+| ...|.++ +|+|++++|++++.|+.|+ +|+
T Consensus 89 --------------~vwd~-------~~~~~~~~~-~~~~~~~h--~~~v~~~---~~~~~~~~l~s~s~dg~i~--vwd 139 (437)
T 3gre_A 89 --------------KIWNL-------KEIIVGEVY-SSSLTYDC--SSTVTQI---TMIPNFDAFAVSSKDGQII--VLK 139 (437)
T ss_dssp --------------EEEEH-------HHHHTTCCC-SCSEEEEC--SSCEEEE---EECTTSSEEEEEETTSEEE--EEE
T ss_pred --------------EEeEC-------cccccCccc-ceeeeccC--CCCEEEE---EEeCCCCEEEEEeCCCEEE--EEE
Confidence 99998 43 2211 00011168 9999999 9999999999999999999 999
Q ss_pred cc---CCCcccccccccccceeeeee--------------CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc--c
Q psy10942 259 RK---TYHFPLFGIFVPEAEHGAFYT--------------GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--H 319 (537)
Q Consensus 259 ~~---~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--~ 319 (537)
+. .+...... ....+..+..+. ...-..+++++.|+.|++||+.+++.... +.. |
T Consensus 140 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-----~~~~~h 213 (437)
T 3gre_A 140 VNHYQQESEVKFL-NCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI-----IENSPR 213 (437)
T ss_dssp EEEEEETTEEEEE-EEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE-----EECCGG
T ss_pred eccccCCceeecc-ccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE-----EccCCC
Confidence 95 22111000 000111222111 01126899999999999999999876433 344 8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942 320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399 (537)
Q Consensus 320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 399 (537)
...|++++|+|++++|++++.||.|++||++ ..+.+..+.. .+..
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-------------------------------~~~~--- 258 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDIWDIR-FNVLIRSWSF-------------------------------GDHA--- 258 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEEBC-------------------------------TTCE---
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEEcC-CccEEEEEec-------------------------------CCCC---
Confidence 8999999999999999999999999999998 4554444331 1222
Q ss_pred EEEEecCCCceEEeeeeEEE----EcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-----------------------
Q psy10942 400 TLAITKDENQIITGGVWFVN----FSPLDRILISSSGDATIKLWCLTDYVCLKSLEG----------------------- 452 (537)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~----~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------- 452 (537)
.|.+++ |+|++++|++++.||.|++||+.+++.+..+.+
T Consensus 259 --------------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 259 --------------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp --------------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred --------------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 556664 445788999999999999999999988877764
Q ss_pred ---CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC-----------------------------------
Q psy10942 453 ---HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK----------------------------------- 494 (537)
Q Consensus 453 ---~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~----------------------------------- 494 (537)
|...|++++|+ ++++|++++.|+.|++||+.+++....+.+
T Consensus 325 ~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (437)
T 3gre_A 325 GIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDS 403 (437)
T ss_dssp CCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred ccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcc
Confidence 44568889999 778999999999999999999988887776
Q ss_pred --CccceeccCCCCCCccccccceeeecC--CCEEEEEeCCCCEEeC
Q psy10942 495 --HALKIRNSDSENDHKGFGLPRQLCSRN--SDCEYRGGWSPQVVVY 537 (537)
Q Consensus 495 --~~~~i~~~~~~~~~~~~~~~~~~~s~~--~~~l~s~~~dg~i~vW 537 (537)
|...| .++ +|+++ +.+|++++.||.|+||
T Consensus 404 ~~h~~~I-----------~~i---~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 404 LYHHDII-----------NSI---STCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp ---CCCE-----------EEE---EEEESSSSEEEEEEETTSCEEEE
T ss_pred cccccce-----------eeE---eeeccCCceEEEEEcCCceEEEe
Confidence 45555 777 99998 8899999999999998
No 70
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.1e-35 Score=278.70 Aligned_cols=299 Identities=12% Similarity=0.096 Sum_probs=203.5
Q ss_pred CceeeeeeeeeccCCcceEEEecC-------cceEEEEEcCccceee----------eec-cccccceeeeEeecCcc-c
Q psy10942 1 VKFCVTCFDVIPQITSEFSVHCGR-------DKVLFTWDLSSRKQLR----------SYP-AYESLETCAVFHLSDET-E 61 (537)
Q Consensus 1 ~~~~V~~~~~~~~~~~~~l~s~~~-------~g~v~iwd~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~-~ 61 (537)
+.++|.|++|+ ||+++|++||. ++.|++|++..+.... .+. +...+.++++ .+... .
T Consensus 13 ~g~PV~sv~fs--~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~ 88 (365)
T 4h5i_A 13 VGYPAYGAKFL--NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILV 88 (365)
T ss_dssp CSSCEEEEEEE--ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEE
T ss_pred CCCCEEEEEEe--CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEE
Confidence 35789999999 89999999864 3369999987654321 111 1222333311 11000 0
Q ss_pred cccCCcEEEEEeCccceEEeeeccceehh----hhc------CCCcceEEEEEeccccEEEEEe--CCceEEEEeccccc
Q psy10942 62 SKSGGKTFVLAGGEKSLLHYYETSAVKEL----YQH------GLSSPLVRIVRSSVKRMYAVVT--ADHNISLYRLNSET 129 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~i~~wd~~~~~~~----~~~------~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~ 129 (537)
..+.+...+++++.++.+++|++.+.... ... .....+.+++|||||++||+++ .|++|+|||+.+
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~-- 166 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD-- 166 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--
Confidence 00001222333456788999998754321 111 1124689999999999987665 689999999998
Q ss_pred CcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc
Q psy10942 130 GLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS 209 (537)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~ 209 (537)
.+.+..+. |...|.+++|+ |+++++++++.+. + .+|+. .+
T Consensus 167 ---------~~~~~~~~-~~~~V~~v~fs-pdg~~l~s~s~~~-----~-----------------~~~~~-------~~ 206 (365)
T 4h5i_A 167 ---------LTEKFEIE-TRGEVKDLHFS-TDGKVVAYITGSS-----L-----------------EVIST-------VT 206 (365)
T ss_dssp ---------TEEEEEEE-CSSCCCEEEEC-TTSSEEEEECSSC-----E-----------------EEEET-------TT
T ss_pred ---------CcEEEEeC-CCCceEEEEEc-cCCceEEecccee-----E-----------------EEEEe-------cc
Confidence 67777775 66779999999 7888888877544 4 55655 44
Q ss_pred ccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEE
Q psy10942 210 SSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLA 289 (537)
Q Consensus 210 ~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 289 (537)
+..... ....+| ...|.++ +|+|+++++++++.|+...
T Consensus 207 ~~~~~~-~~~~~~--~~~v~~v---~fspdg~~l~~~s~d~~~~------------------------------------ 244 (365)
T 4h5i_A 207 GSCIAR-KTDFDK--NWSLSKI---NFIADDTVLIAASLKKGKG------------------------------------ 244 (365)
T ss_dssp CCEEEE-ECCCCT--TEEEEEE---EEEETTEEEEEEEESSSCC------------------------------------
T ss_pred Ccceee-eecCCC--CCCEEEE---EEcCCCCEEEEEecCCcce------------------------------------
Confidence 443310 111278 8899999 9999999999988776422
Q ss_pred EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE-EecCCCCEE
Q psy10942 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL-RGHKKGTQI 368 (537)
Q Consensus 290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~l 368 (537)
..++.|+.......... ...+.+|...|++++|+|||++|++|+.|++|+|||+. ..+++..+ .+|..
T Consensus 245 -----~~i~~~~~~~~~~~~~~-~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~-~~~~~~~~~~gH~~---- 313 (365)
T 4h5i_A 245 -----IVLTKISIKSGNTSVLR-SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK-DLSMSKIFKQAHSF---- 313 (365)
T ss_dssp -----EEEEEEEEETTEEEEEE-EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEETTSSSS----
T ss_pred -----eEEeecccccceeccee-eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC-CCcEEEEecCcccC----
Confidence 01233333332221111 23456788899999999999999999999999999998 55555443 34443
Q ss_pred EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942 369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD 443 (537)
Q Consensus 369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (537)
.|++++|+|||++||+|+.|++|+|||++.
T Consensus 314 ---------------------------------------------~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 314 ---------------------------------------------AITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ---------------------------------------------CEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred ---------------------------------------------CEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 899999999999999999999999999964
No 71
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-35 Score=287.50 Aligned_cols=285 Identities=13% Similarity=0.093 Sum_probs=217.3
Q ss_pred cceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942 97 SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG 175 (537)
Q Consensus 97 ~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~ 175 (537)
..|++++|+| ++++||+|+.||.|+|||+.++. ......+.+|.+.|.+++|+|.++++|++++.++.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~---------~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~-- 188 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD---------KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT-- 188 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS---------CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC--
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC---------ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE--
Confidence 4799999999 56789999999999999998731 23344567899999999999667888888888777
Q ss_pred CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| ++||+ ++.... +. ....+ ...+.++ +|+|++++|++|+.||.|+
T Consensus 189 --v-----------------~iwd~-------~~~~~~~~~--~~~~~--~~~~~~~---~~~~~~~~l~~g~~dg~i~- 234 (435)
T 4e54_B 189 --T-----------------RLQDF-------KGNILRVFA--SSDTI--NIWFCSL---DVSASSRMVVTGDNVGNVI- 234 (435)
T ss_dssp --E-----------------EEEET-------TSCEEEEEE--CCSSC--SCCCCCE---EEETTTTEEEEECSSSBEE-
T ss_pred --E-----------------EEeec-------cCCceeEEe--ccCCC--CccEEEE---EECCCCCEEEEEeCCCcEe-
Confidence 9 99999 655444 22 00123 4567888 8999999998888888888
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC-
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK- 333 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 333 (537)
+|++... . ...+.+|...|.+++|+|++.
T Consensus 235 -~wd~~~~-------------------------------------------~------~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 235 -LLNMDGK-------------------------------------------E------LWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp -EEESSSC-------------------------------------------B------CCCSBCCSSCEEEEEECTTCSS
T ss_pred -eeccCcc-------------------------------------------e------eEEEecccceEEeeeecCCCce
Confidence 7776541 1 223457889999999999876
Q ss_pred EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942 334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413 (537)
Q Consensus 334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 413 (537)
+|++++.|+.|++||++.. +... .+.....|..
T Consensus 265 ~~~s~s~d~~v~iwd~~~~-~~~~-----------------------------~~~~~~~h~~----------------- 297 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQV-RGKA-----------------------------SFLYSLPHRH----------------- 297 (435)
T ss_dssp EEEEEETTSBCCEEETTTC-CSSS-----------------------------CCSBCCBCSS-----------------
T ss_pred EEEEecCcceeeEEecccc-cccc-----------------------------eEEEeeeccc-----------------
Confidence 7888999999999998732 1110 0111122333
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc------ceEEEEEecCCCEEEEEeC------------C
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA------SVLRCHFINKGTQIVSTGA------------D 475 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~~~------------d 475 (537)
.|.+++|+|++++|++++.||.|++||+.+++....+..|.. .+....|+|++.++++++. +
T Consensus 298 ~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 377 (435)
T 4e54_B 298 PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYEL 377 (435)
T ss_dssp CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCC
T ss_pred cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCC
Confidence 788899999999999999999999999999888777766643 2345678888777777642 3
Q ss_pred CcEEEEECCCCeeEEEec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 476 GLLKLWSIKTSTCVSTFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 476 g~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+.|++||..+++.+..+. +|...| .++ .+|+|+|++|++|+ |+.|+||
T Consensus 378 ~~i~iwd~~~g~~~~~l~~~~~~~v-----------~s~--~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 378 RTIDVFDGNSGKMMCQLYDPESSGI-----------SSL--NEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp CCEEEECSSSCCEEEEECCSSCCCC-----------CCE--EEECTTSSCEEEEC-SSEEEEC
T ss_pred CEEEEEECCCCcEEEEEeCCCCCcE-----------EEE--EEECCCCCEEEEEc-CCcEEEE
Confidence 579999999999988875 567777 655 15999999999876 8899999
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.7e-36 Score=283.00 Aligned_cols=324 Identities=14% Similarity=0.178 Sum_probs=238.9
Q ss_pred eeeeeeeeecc--CCcceEEEecCcceEEEEEcCccceeeeec------cccccceeeeEeecCccccccCCcEEEEEeC
Q psy10942 3 FCVTCFDVIPQ--ITSEFSVHCGRDKVLFTWDLSSRKQLRSYP------AYESLETCAVFHLSDETESKSGGKTFVLAGG 74 (537)
Q Consensus 3 ~~V~~~~~~~~--~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (537)
..|++++|+|. .....+++++.++.|++||+.+++.+..+. +.+.+..+ .+.|.. ..++.++++++
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~----~~~~~~l~~~~ 92 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTC--AWTYDS----NTSHPLLAVAG 92 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEE--EEEECT----TTCCEEEEEEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEE--EeccCC----CCCCCEEEEec
Confidence 47999999953 134556666667799999999988877665 23456666 556631 11268999999
Q ss_pred ccceEEeeeccceehhhhcCC-CcceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEe---ecch
Q psy10942 75 EKSLLHYYETSAVKELYQHGL-SSPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF---VGFS 149 (537)
Q Consensus 75 ~~~~i~~wd~~~~~~~~~~~~-~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~ 149 (537)
.||.|++||+.+++.+..+.. .+.|.+++|+| ++++|++++.|+.|++||+.+ .+....+ .+|.
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----------~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-----------DTLVAIFGGVEGHR 161 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-----------TEEEEEECSTTSCS
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-----------CeEEEEeccccccc
Confidence 999999999999998888874 47999999999 999999999999999999998 5667776 6788
Q ss_pred hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCe
Q psy10942 150 DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKT 227 (537)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~ 227 (537)
..|.+++|+ +++..+++++.++. | ++||+ .+.+.. +. .
T Consensus 162 ~~v~~~~~~-~~~~~l~~~~~dg~----i-----------------~i~d~-------~~~~~~~~~~-----~------ 201 (366)
T 3k26_A 162 DEVLSADYD-LLGEKIMSCGMDHS----L-----------------KLWRI-------NSKRMMNAIK-----E------ 201 (366)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSC----E-----------------EEEES-------CSHHHHHHHH-----H------
T ss_pred CceeEEEEC-CCCCEEEEecCCCC----E-----------------EEEEC-------CCCccccccc-----e------
Confidence 889999999 67778888777666 8 88888 655544 22 1
Q ss_pred EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942 228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK 307 (537)
Q Consensus 228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~ 307 (537)
.+ .++|++..+.......... .
T Consensus 202 --~~---~~~~~~~~~~~~~~~~~~~----------------------------------------------------~- 223 (366)
T 3k26_A 202 --SY---DYNPNKTNRPFISQKIHFP----------------------------------------------------D- 223 (366)
T ss_dssp --HH---TCCGGGCSSCCCCEEECCC----------------------------------------------------S-
T ss_pred --eE---EecCCCCcccccceeeccC----------------------------------------------------c-
Confidence 23 6667665443322110000 0
Q ss_pred eeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942 308 LLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC 387 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 387 (537)
......|...|.+++|+ ++++++++.|+.|++||+.........+..+.. ....
T Consensus 224 -----~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------------~~~~ 277 (366)
T 3k26_A 224 -----FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSES-------------------NVTI 277 (366)
T ss_dssp -----EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCC-------------------CEEE
T ss_pred -----cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCc-------------------chhe
Confidence 11224578889999998 779999999999999999843322211111110 0122
Q ss_pred eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC--CCEEEEEeCCCcEEEEECCCcee----eeEeecC--CcceEE
Q psy10942 388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL--DRILISSSGDATIKLWCLTDYVC----LKSLEGH--DASVLR 459 (537)
Q Consensus 388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~--~~~v~~ 459 (537)
+..+..|.. .+.+++|+|+ +++|++++.||.|++||+.++++ ...+.+| ...|++
T Consensus 278 ~~~~~~~~~-----------------~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~ 340 (366)
T 3k26_A 278 LGRFDYSQC-----------------DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ 340 (366)
T ss_dssp EEEEECSSC-----------------CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEE
T ss_pred eccccccCC-----------------cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEE
Confidence 233333433 6777888888 99999999999999999998753 4477777 789999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 460 CHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 460 ~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
++|+|++++|++++.||.|++||+.
T Consensus 341 ~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 341 TSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999999999999999985
No 73
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.6e-35 Score=301.31 Aligned_cols=285 Identities=18% Similarity=0.242 Sum_probs=222.0
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee-----hhhhcCCC-cceEEEEEeccccEEEEEeCC
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK-----ELYQHGLS-SPLVRIVRSSVKRMYAVVTAD 117 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~~-~~v~~~~~s~~~~~la~~~~d 117 (537)
|...+.++ .+.|. +..+|++++.|+.|++||+.+.. ....+..| ..|.+++|+|++++|++++.|
T Consensus 381 H~~~V~~v--~~~~~-------~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 381 HTDMVTAI--ATPID-------NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp CSSCEEEE--ECCTT-------CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceeEEE--EecCC-------CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 56667777 55664 56799999999999999997643 23444444 689999999999999999999
Q ss_pred ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH
Q psy10942 118 HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT 197 (537)
Q Consensus 118 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 197 (537)
++|++||+.+ ....+.+.+|...|.+++|+ +++++|++++.++. | ++
T Consensus 452 g~v~vwd~~~-----------~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~D~~----i-----------------~i 498 (694)
T 3dm0_A 452 GELRLWDLAA-----------GVSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRT----I-----------------KL 498 (694)
T ss_dssp SEEEEEETTT-----------TEEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSC----E-----------------EE
T ss_pred CcEEEEECCC-----------CcceeEEeCCCCCEEEEEEe-CCCCEEEEEeCCCE----E-----------------EE
Confidence 9999999998 67888999999999999999 78889998888877 9 99
Q ss_pred HHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCC--CeeeeccCCCcceeccccccCCCcccccccccccc
Q psy10942 198 FERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEE--DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE 275 (537)
Q Consensus 198 wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~--~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~ 275 (537)
||. .............+| ...|.++ +|+|++ ..+++++.|+.|+ +|++..
T Consensus 499 wd~-------~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~~~l~s~s~d~~v~--vwd~~~-------------- 550 (694)
T 3dm0_A 499 WNT-------LGECKYTISEGGEGH--RDWVSCV---RFSPNTLQPTIVSASWDKTVK--VWNLSN-------------- 550 (694)
T ss_dssp ECT-------TSCEEEEECSSTTSC--SSCEEEE---EECSCSSSCEEEEEETTSCEE--EEETTT--------------
T ss_pred EEC-------CCCcceeeccCCCCC--CCcEEEE---EEeCCCCcceEEEEeCCCeEE--EEECCC--------------
Confidence 997 433222111112278 8999999 999986 4566666666666 665544
Q ss_pred eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL 355 (537)
Q Consensus 276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~ 355 (537)
.+. ...+.+|...|++++|+|++++|++++.|+.|++||+. ..+.
T Consensus 551 -----------------------------~~~-----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~-~~~~ 595 (694)
T 3dm0_A 551 -----------------------------CKL-----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA-EGKK 595 (694)
T ss_dssp -----------------------------CCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT-TTEE
T ss_pred -----------------------------CcE-----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCce
Confidence 322 23346789999999999999999999999999999998 4333
Q ss_pred eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942 356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT 435 (537)
Q Consensus 356 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (537)
+..+. .+. .+.+++|+|++.++++++ ++.
T Consensus 596 ~~~~~--------------------------------~~~------------------~v~~~~~sp~~~~l~~~~-~~~ 624 (694)
T 3dm0_A 596 LYSLE--------------------------------ANS------------------VIHALCFSPNRYWLCAAT-EHG 624 (694)
T ss_dssp EECCB--------------------------------CSS------------------CEEEEEECSSSSEEEEEE-TTE
T ss_pred EEEec--------------------------------CCC------------------cEEEEEEcCCCcEEEEEc-CCC
Confidence 32221 111 678899999998888776 566
Q ss_pred EEEEECCCceeeeEeecCC-------------------cceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 436 IKLWCLTDYVCLKSLEGHD-------------------ASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~-------------------~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
|++||+.+++.+..+..+. ..+++++|+|++++|++|+.||.|++|++.
T Consensus 625 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 625 IKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 9999999998887765332 137899999999999999999999999985
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.7e-36 Score=287.10 Aligned_cols=348 Identities=13% Similarity=0.139 Sum_probs=242.3
Q ss_pred CcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcC--------
Q psy10942 24 RDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHG-------- 94 (537)
Q Consensus 24 ~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-------- 94 (537)
.++.+++|+++.++....+. +..++.++ .+.|. ++.++++++.||.|++||+.+++....+.
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~--~~s~~-------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 91 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTL--DIEPV-------EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIG 91 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEE--EECTT-------TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEEC
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEE--EEecC-------CCCEEEEEcCCCeEEEEECCCCcccceEecccccccc
Confidence 34568889988887777666 66778888 56774 55799999999999999999887766654
Q ss_pred ------CCcceEEEEEec-cccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC--CCccE
Q psy10942 95 ------LSSPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE--EDSHI 165 (537)
Q Consensus 95 ------~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l 165 (537)
+.+.|.+++|+| ++++|++++.|+.|++||+.+ .+....+. +...+.+++|+|. ++..+
T Consensus 92 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (408)
T 4a11_B 92 RDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-----------LQTADVFN-FEETVYSHHMSPVSTKHCLV 159 (408)
T ss_dssp TTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT-----------TEEEEEEE-CSSCEEEEEECSSCSSCCEE
T ss_pred ccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC-----------Cccceecc-CCCceeeeEeecCCCCCcEE
Confidence 557999999999 778999999999999999998 56666665 6667888888843 33477
Q ss_pred EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCe-
Q psy10942 166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDL- 242 (537)
Q Consensus 166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~- 242 (537)
++++.++. | ++||+ .+++.. +. +| ...|.++ +|+|++++
T Consensus 160 ~~~~~~~~----v-----------------~~~d~-------~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~l 201 (408)
T 4a11_B 160 AVGTRGPK----V-----------------QLCDL-------KSGSCSHILQ-----GH--RQEILAV---SWSPRYDYI 201 (408)
T ss_dssp EEEESSSS----E-----------------EEEES-------SSSCCCEEEC-----CC--CSCEEEE---EECSSCTTE
T ss_pred EEEcCCCe----E-----------------EEEeC-------CCcceeeeec-----CC--CCcEEEE---EECCCCCcE
Confidence 77776666 9 99999 777665 66 89 9999999 99999985
Q ss_pred eeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCC
Q psy10942 243 FPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKD 322 (537)
Q Consensus 243 l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 322 (537)
+++++.||.++ +|++...... +..++.......... ......|...
T Consensus 202 l~~~~~dg~i~--i~d~~~~~~~-------------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~ 247 (408)
T 4a11_B 202 LATASADSRVK--LWDVRRASGC-------------------------------LITLDQHNGKKSQAV-ESANTAHNGK 247 (408)
T ss_dssp EEEEETTSCEE--EEETTCSSCC-------------------------------SEECCTTTTCSCCCT-TTSSCSCSSC
T ss_pred EEEEcCCCcEE--EEECCCCCcc-------------------------------cccccccccccceee-ccccccccCc
Confidence 88999999999 9999874321 111111111111111 3344678999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE---------------ecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942 323 INCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR---------------GHKKGTQIVSTGADGLLKLWSIKTSTC 387 (537)
Q Consensus 323 v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------------~~~~~~~l~~~~~d~~i~i~d~~~~~~ 387 (537)
|.+++|+|++++|++++.|+.|++||+... +...... ....+..++.++.++.|++||+.+++.
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNG-ENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTC-CBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCC-ccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 999999999999999999999999999843 3222111 112256677788899999999999999
Q ss_pred eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec-CC
Q psy10942 388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN-KG 466 (537)
Q Consensus 388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~ 466 (537)
+..+..|.. .|.+++|+|++++|++++.||.|++||+.+++++.....+... ..+.+ ..
T Consensus 327 ~~~~~~~~~-----------------~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~ 386 (408)
T 4a11_B 327 ITMLKGHYK-----------------TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFE 386 (408)
T ss_dssp EEEECCCSS-----------------CEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred eeeeccCCC-----------------eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccc
Confidence 999988876 7888889999999999999999999999998877665533222 23333 33
Q ss_pred CEEEEEeCCCcEEEEECCC
Q psy10942 467 TQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 467 ~~l~s~~~dg~v~vwd~~~ 485 (537)
..+.+.+.++.+++|+...
T Consensus 387 ~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 387 DAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -------------------
T ss_pred eeecccCccCceeecCCcc
Confidence 4556677899999998653
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6e-35 Score=285.15 Aligned_cols=324 Identities=9% Similarity=0.139 Sum_probs=230.5
Q ss_pred cCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch------------hhhhhhhcccC
Q psy10942 93 HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS------------DEILDIALLGE 160 (537)
Q Consensus 93 ~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~ 160 (537)
+...+.|.+++|+|+|++||+|+.||.|+|||+.++...........+....+.+|. ..|.+++|+ +
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~-~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL-P 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC-C
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc-C
Confidence 444579999999999999999999999999999874211111112233678889998 889999999 4
Q ss_pred CC--ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---------------------cc--
Q psy10942 161 ED--SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---------------------KH-- 215 (537)
Q Consensus 161 ~~--~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---------------------l~-- 215 (537)
++ ..+++++.++. | ++||+ ...... +.
T Consensus 104 ~~~~~~l~s~s~d~~----i-----------------~iw~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 155 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKT----I-----------------KLWKI-------SERDKRPEGYNLKEEDGRYRDPTTVTTLRVP 155 (447)
T ss_dssp CCSSSEEEEEECSSC----E-----------------EEEEE-------EEEEEEEECCSCC--------CCCCCSCCCC
T ss_pred CCCcceEEEeCCCCe----E-----------------EEEec-------ccccCCcceecccCccccccCcccccceEec
Confidence 54 67888877766 9 89988 443221 00
Q ss_pred --------------ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee
Q psy10942 216 --------------NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT 281 (537)
Q Consensus 216 --------------~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~ 281 (537)
.....+| ...|.++ +|+|++++|+++ .|+.|+ +|++....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~h--~~~v~~~---~~~~~~~~l~s~-~d~~i~--iwd~~~~~------------------ 209 (447)
T 3dw8_B 156 VFRPMDLMVEASPRRIFANAH--TYHINSI---SINSDYETYLSA-DDLRIN--LWHLEITD------------------ 209 (447)
T ss_dssp EEEEEEEEEEEEEEEEECSCC--SSCCCEE---EECTTSSEEEEE-CSSEEE--EEETTEEE------------------
T ss_pred cccchheeeeccceEEeccCC--CcceEEE---EEcCCCCEEEEe-CCCeEE--EEECCCCC------------------
Confidence 0012378 8999999 999999999998 799999 99987421
Q ss_pred CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCcee----e
Q psy10942 282 GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND-KLLASGSLDKTVKVWSTTGGLKL----L 356 (537)
Q Consensus 282 ~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~----~ 356 (537)
..+.+++... ..+..|...|.+++|+|++ ++|++++.||.|++||++ ..+. +
T Consensus 210 -------------~~~~~~~~~~---------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~ 266 (447)
T 3dw8_B 210 -------------RSFNIVDIKP---------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR-ASALCDRHS 266 (447)
T ss_dssp -------------EEEEEEECCC---------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT-TCSSSCTTC
T ss_pred -------------ceeeeeeccc---------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc-CCcccccee
Confidence 1122333321 2356889999999999998 999999999999999998 3332 3
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942 357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436 (537)
Q Consensus 357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 436 (537)
..+..|... .....+..|.. .+.+++|+|++++|++++. +.|
T Consensus 267 ~~~~~~~~~--------------------~~~~~~~~~~~-----------------~v~~~~~s~~g~~l~~~~~-~~v 308 (447)
T 3dw8_B 267 KLFEEPEDP--------------------SNRSFFSEIIS-----------------SISDVKFSHSGRYMMTRDY-LSV 308 (447)
T ss_dssp EEECCC-------------------------CCHHHHHTT-----------------CEEEEEECTTSSEEEEEES-SEE
T ss_pred eEeccCCCc--------------------cccccccccCc-----------------eEEEEEECCCCCEEEEeeC-CeE
Confidence 444433220 00011112222 7889999999999999999 999
Q ss_pred EEEECCC-ceeeeEeecCCcc---------------eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcccee
Q psy10942 437 KLWCLTD-YVCLKSLEGHDAS---------------VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR 500 (537)
Q Consensus 437 ~i~d~~~-~~~~~~~~~~~~~---------------v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~ 500 (537)
++||+.+ ++++..+.+|... +..++|+|++++|++++.||.|++||+.+++.+ .+..|..+..
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~ 387 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNK 387 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCC
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccc
Confidence 9999997 8889999988642 234999999999999999999999999998876 4444432211
Q ss_pred cc----------------------CCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 501 NS----------------------DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 501 ~~----------------------~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.. ..........+ +|+|++++||+++.++ +.+|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~p~~~~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 388 PRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT---AWHPKENIIAVATTNN-LYIF 442 (447)
T ss_dssp TTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE---EECSSSSEEEEECSSC-EEEE
T ss_pred cccccCCccccccCCcccccccccccccCCceeEE---EECCCCCEEEEEecce-eeee
Confidence 00 00111122456 9999999999998776 5554
No 76
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=276.53 Aligned_cols=292 Identities=13% Similarity=0.135 Sum_probs=221.0
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCc---cceEEeeeccceehhhh--cCCCcceEEEEEecc---ccEEEEEe
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGE---KSLLHYYETSAVKELYQ--HGLSSPLVRIVRSSV---KRMYAVVT 115 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~wd~~~~~~~~~--~~~~~~v~~~~~s~~---~~~la~~~ 115 (537)
+...+.++ .+.|. +..++++++. |+.|++||+.+++.... ..+.+.|.+++|+|+ +++|++++
T Consensus 17 h~~~v~~~--~~~p~-------~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 17 FNYTVFDC--KWVPC-------SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp CSSCEEEE--EECTT-------SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred CCCceEEE--EEcCC-------CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence 56677777 66885 5467777876 99999999998876433 345579999999999 69999999
Q ss_pred CCceEEEEecccccCcccccccccc-eeEEeecchhhhhhh------hcccCCCccEEEeeeccccCCcccceeecccCC
Q psy10942 116 ADHNISLYRLNSETGLEERPNKILK-FRKQFVGFSDEILDI------ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANR 188 (537)
Q Consensus 116 ~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~------~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 188 (537)
.|+.|++||+.+ .+ ....+.+|...|.++ +|+ ++++.|++++.++. |
T Consensus 88 ~dg~i~iwd~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~s-~~~~~l~~~~~d~~----i---------- 141 (357)
T 3i2n_A 88 FGGNLHIWNLEA-----------PEMPVYSVKGHKEIINAIDGIGGLGIG-EGAPEIVTGSRDGT----V---------- 141 (357)
T ss_dssp TTSCEEEECTTS-----------CSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSC----E----------
T ss_pred CCCeEEEEeCCC-----------CCccEEEEEecccceEEEeeccccccC-CCccEEEEEeCCCe----E----------
Confidence 999999999998 44 778889999999998 556 67888888887776 9
Q ss_pred CcchhhHHHHHHHHHhhhcccccc-c--ccccccccCCC--cCeEEEEeccC----cccCCCeeeeccCCCcceeccccc
Q psy10942 189 SHNEWFDKTFERILEAKFKQSSSQ-Q--KHNTERLGRDE--LKTVTLLERGK----TVKEEDLFPRQSMEPSTLEELEKR 259 (537)
Q Consensus 189 ~~~~~~~~~wd~~~~~~~~~~~~~-~--l~~~~~~~h~~--~~~v~~~~~~~----~s~~~~~l~~~~~d~~i~~~iw~~ 259 (537)
++||+ ..... . +. .|.. ...+.++ + |+|+++++++++.|+.++ +|++
T Consensus 142 -------~vwd~-------~~~~~~~~~~~-----~~~~~~~~~v~~~---~~~~~~~~~~~~l~~~~~d~~i~--i~d~ 197 (357)
T 3i2n_A 142 -------KVWDP-------RQKDDPVANME-----PVQGENKRDCWTV---AFGNAYNQEERVVCAGYDNGDIK--LFDL 197 (357)
T ss_dssp -------EEECT-------TSCSSCSEEEC-----CCTTSCCCCEEEE---EEECCCC-CCCEEEEEETTSEEE--EEET
T ss_pred -------EEEeC-------CCCCCcceecc-----ccCCCCCCceEEE---EEEeccCCCCCEEEEEccCCeEE--EEEC
Confidence 99999 66652 2 33 3300 2377777 6 677887777777777777 6666
Q ss_pred cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC---CCCEEE
Q psy10942 260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP---NDKLLA 336 (537)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~ 336 (537)
.. ++.. ....|...|.+++|+| ++++|+
T Consensus 198 ~~-------------------------------------------~~~~------~~~~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 198 RN-------------------------------------------MALR------WETNIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp TT-------------------------------------------TEEE------EEEECSSCEEEEEESCSSSSCCEEE
T ss_pred cc-------------------------------------------Ccee------eecCCCCceEEEEcCCCCCCCCEEE
Confidence 55 2211 1135677899999999 999999
Q ss_pred EEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942 337 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW 416 (537)
Q Consensus 337 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 416 (537)
+++.||.|++||++ ..+....+.. ..+..|.. .+.
T Consensus 229 ~~~~dg~i~i~d~~-~~~~~~~~~~---------------------------~~~~~~~~-----------------~v~ 263 (357)
T 3i2n_A 229 ATSLEGKFHVFDMR-TQHPTKGFAS---------------------------VSEKAHKS-----------------TVW 263 (357)
T ss_dssp EEESTTEEEEEEEE-EEETTTEEEE---------------------------EEEECCSS-----------------CEE
T ss_pred EECCCCeEEEEeCc-CCCcccceee---------------------------eccCCCcC-----------------CEE
Confidence 99999999999998 3332222210 01112322 788
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEECCCc-------------------eeeeEeecCCcceEEEEEecCCCEEE-EEeCC
Q psy10942 417 FVNFSPLDR-ILISSSGDATIKLWCLTDY-------------------VCLKSLEGHDASVLRCHFINKGTQIV-STGAD 475 (537)
Q Consensus 417 ~~~~s~~~~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d 475 (537)
+++|+|+++ +|++++.||.|++||+..+ +.+..+.+|...|++++|+|++++|+ +++.|
T Consensus 264 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d 343 (357)
T 3i2n_A 264 QVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD 343 (357)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT
T ss_pred EEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC
Confidence 899999988 8999999999999998753 46778889999999999999999998 89999
Q ss_pred CcEEEEECCCCee
Q psy10942 476 GLLKLWSIKTSTC 488 (537)
Q Consensus 476 g~v~vwd~~~~~~ 488 (537)
|.|++||+.+.+.
T Consensus 344 ~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 344 QTVRVLIVTKLNK 356 (357)
T ss_dssp SEEEEEEECC---
T ss_pred CcEEEEECCCccc
Confidence 9999999987654
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.4e-34 Score=261.60 Aligned_cols=251 Identities=16% Similarity=0.107 Sum_probs=186.1
Q ss_pred ccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Cc--------ceEEE
Q psy10942 220 LGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GT--------VELLA 289 (537)
Q Consensus 220 ~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------v~~l~ 289 (537)
.+| ...|.++ +|+|+|++|++++.|+.|+ +|++..... .+ ...+.+|.. .+ -.+|+
T Consensus 6 ~~h--~~~V~~~---~~s~~g~~las~s~D~~v~--iw~~~~~~~--~~-----~~~l~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 6 NAH--NEMIHDA---VMDYYGKRMATCSSDKTIK--IFEVEGETH--KL-----IDTLTGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp CSC--SSCEEEE---EECTTSSEEEEEETTSCEE--EEEBCSSCB--CC-----CEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred cCC--cCceEEE---EECCCCCEEEEEeCCCEEE--EEecCCCCc--EE-----EEEEccccCCeEEEEecCCCcCCEEE
Confidence 499 9999999 9999999999999999999 999875321 11 333444433 11 15899
Q ss_pred EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCcee-eEEEEecCCCC
Q psy10942 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGT 366 (537)
Q Consensus 290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~ 366 (537)
+++.|++|++||+.++.... ...+..|...|.+++|+|+ +++|++++.|+.|++||++..... ...
T Consensus 72 s~s~D~~v~iWd~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~-------- 140 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQ---IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII-------- 140 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCC---CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE--------
T ss_pred EEcCCCEEEEEEcCCCceEE---EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee--------
Confidence 99999999999998764211 2345679999999999997 889999999999999999832111 112
Q ss_pred EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce-
Q psy10942 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV- 445 (537)
Q Consensus 367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~- 445 (537)
+..|...+.+++|+|+..... ..-...+++++|++|+.|+.|++||+.+++
T Consensus 141 ------------------------~~~h~~~v~~~~~~p~~~~~~----~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~ 192 (297)
T 2pm7_B 141 ------------------------IDAHAIGVNSASWAPATIEED----GEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192 (297)
T ss_dssp ------------------------EECCSSCEEEEEECCCC----------------CCEEEEEETTSCEEEEEEETTTT
T ss_pred ------------------------eecccCccceEeecCCccccc----ccCCCCCCcceEEEEcCCCcEEEEEEcCCCc
Confidence 233444444444444321100 000011236799999999999999998755
Q ss_pred ---eeeEeecCCcceEEEEEecCC---CEEEEEeCCCcEEEEECCCCe---eEEEe--cCCccceeccCCCCCCcccccc
Q psy10942 446 ---CLKSLEGHDASVLRCHFINKG---TQIVSTGADGLLKLWSIKTST---CVSTF--DKHALKIRNSDSENDHKGFGLP 514 (537)
Q Consensus 446 ---~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~---~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 514 (537)
....+.+|...|.+++|+|++ .+|++++.|++|++||++++. ....+ ..|...+ .++
T Consensus 193 ~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v-----------~~~- 260 (297)
T 2pm7_B 193 TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL-----------WRA- 260 (297)
T ss_dssp EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE-----------EEE-
T ss_pred eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE-----------EEE-
Confidence 667889999999999999984 899999999999999987643 12233 4567778 888
Q ss_pred ceeeecCCCEEEEEeCCCCEEeC
Q psy10942 515 RQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 515 ~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+|+|++++|++++.||.|+||
T Consensus 261 --~~s~~g~~las~~~D~~v~lw 281 (297)
T 2pm7_B 261 --SWSLSGNVLALSGGDNKVTLW 281 (297)
T ss_dssp --EECSSSCCEEEEETTSCEEEE
T ss_pred --EECCCCCEEEEEcCCCcEEEE
Confidence 999999999999999999998
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-36 Score=291.26 Aligned_cols=323 Identities=14% Similarity=0.146 Sum_probs=236.3
Q ss_pred CCcceEEEecCcceEEEEEcCccceeeee-c-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccc---ee
Q psy10942 14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSY-P-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSA---VK 88 (537)
Q Consensus 14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~---~~ 88 (537)
+++..+++++ .|+ .+++++..+ . +..++.++ .+.|. ++.++++++.||.|++||+.+ +.
T Consensus 37 ~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~--~~s~~-------~~~~l~s~s~dg~v~vwd~~~~~~~~ 100 (437)
T 3gre_A 37 PIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSS--AVSPG-------ETPYLITGSDQGVIKIWNLKEIIVGE 100 (437)
T ss_dssp CCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEE--EEECS-------SSCEEEEEETTSEEEEEEHHHHHTTC
T ss_pred Cccccccccc------ccc-ccceEEeeeccCCCCceEEE--EECCC-------CCCEEEEecCCceEEEeECcccccCc
Confidence 6777777765 387 567888877 4 45778888 55773 457999999999999999987 43
Q ss_pred ---hhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc------------hhhhh
Q psy10942 89 ---ELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF------------SDEIL 153 (537)
Q Consensus 89 ---~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~ 153 (537)
....+.+.+.|.+++|+|++++|++++.|+.|++||+..... ++....+.+| ...+.
T Consensus 101 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~ 172 (437)
T 3gre_A 101 VYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQ--------ESEVKFLNCECIRKINLKNFGKNEYAV 172 (437)
T ss_dssp CCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEE--------TTEEEEEEEEEEEEEEGGGGSSCCCEE
T ss_pred ccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccC--------CceeeccccceeEEEEccCcccccCce
Confidence 233334557999999999999999999999999999962100 3444444443 22233
Q ss_pred hhh--cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccccc--CCCcCe
Q psy10942 154 DIA--LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLG--RDELKT 227 (537)
Q Consensus 154 ~~~--~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~--h~~~~~ 227 (537)
++. ++ +++..+++++.++. | ++||+ ++++.. +. + | ...
T Consensus 173 ~~~~~~~-~~~~~l~~~~~d~~----i-----------------~iwd~-------~~~~~~~~~~-----~~~h--~~~ 216 (437)
T 3gre_A 173 RMRAFVN-EEKSLLVALTNLSR----V-----------------IIFDI-------RTLERLQIIE-----NSPR--HGA 216 (437)
T ss_dssp EEEEEEC-SSCEEEEEEETTSE----E-----------------EEEET-------TTCCEEEEEE-----CCGG--GCC
T ss_pred EEEEEEc-CCCCEEEEEeCCCe----E-----------------EEEeC-------CCCeeeEEEc-----cCCC--CCc
Confidence 333 22 56778888887777 9 99999 777766 55 5 8 899
Q ss_pred EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942 228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK 307 (537)
Q Consensus 228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~ 307 (537)
|.++ +|+|++++|++++.||.|+ +||+..+. .+..+.
T Consensus 217 v~~~---~~s~~~~~l~s~~~dg~i~--iwd~~~~~--------------------------------~~~~~~------ 253 (437)
T 3gre_A 217 VSSI---CIDEECCVLILGTTRGIID--IWDIRFNV--------------------------------LIRSWS------ 253 (437)
T ss_dssp EEEE---EECTTSCEEEEEETTSCEE--EEETTTTE--------------------------------EEEEEB------
T ss_pred eEEE---EECCCCCEEEEEcCCCeEE--EEEcCCcc--------------------------------EEEEEe------
Confidence 9999 9999999999999998888 88877621 011111
Q ss_pred eeeeecccccccCCCeEEEEEc----CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942 308 LLNVLRGHKKGHEKDINCVTVS----PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK 383 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 383 (537)
..|...|.+++|+ |++++|++++.|+.|++||+. ..+.+..+..|..
T Consensus 254 ---------~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~------------------- 304 (437)
T 3gre_A 254 ---------FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV-KGHCQYAFINSDE------------------- 304 (437)
T ss_dssp ---------CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT-TTEEEEEEESSSS-------------------
T ss_pred ---------cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC-CCcEEEEEEcCCC-------------------
Confidence 1455678999665 467789999999999999998 6666666665543
Q ss_pred CCeeeeeeccCCcceEEEEEecCCCce---------EEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec--
Q psy10942 384 TSTCVSTFDKHALKIWTLAITKDENQI---------ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG-- 452 (537)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-- 452 (537)
.+..+.++|++..+ ..+.|.+++|+ ++++|++|+.|+.|++||+.+++....+.+
T Consensus 305 -------------~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 305 -------------QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp -------------CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred -------------CCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 11111122211000 11268889999 778999999999999999999887776665
Q ss_pred -----------------------------------CCcceEEEEEecC--CCEEEEEeCCCcEEEEE
Q psy10942 453 -----------------------------------HDASVLRCHFINK--GTQIVSTGADGLLKLWS 482 (537)
Q Consensus 453 -----------------------------------~~~~v~~~~~s~~--~~~l~s~~~dg~v~vwd 482 (537)
|.+.|++++|+++ +.+|++++.||.|+||+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8889999999998 78999999999999995
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-35 Score=281.60 Aligned_cols=305 Identities=15% Similarity=0.159 Sum_probs=228.3
Q ss_pred CCcceEEEEEecc----ccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-----chhhhhhhhcccCC---C
Q psy10942 95 LSSPLVRIVRSSV----KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-----FSDEILDIALLGEE---D 162 (537)
Q Consensus 95 ~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~---~ 162 (537)
+.+.|.+++|+|+ ...+++++.++.|++||+.+ .+.+..+.. |...|.+++|+|.. +
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 85 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS-----------QGEIRLLQSYVDADADENFYTCAWTYDSNTSH 85 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG-----------GGCEEEEEEEECSCTTCCEEEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC-----------CcEEEeeeeccccCCCCcEEEEEeccCCCCCC
Confidence 4479999999984 44566666677999999998 455555554 44679999999432 4
Q ss_pred ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCccc-C
Q psy10942 163 SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVK-E 239 (537)
Q Consensus 163 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~-~ 239 (537)
.+|++++.++. | ++||+ .+++.. +. +| ...|.++ +|+| +
T Consensus 86 ~~l~~~~~dg~----i-----------------~v~d~-------~~~~~~~~~~-----~~--~~~i~~~---~~~~~~ 127 (366)
T 3k26_A 86 PLLAVAGSRGI----I-----------------RIINP-------ITMQCIKHYV-----GH--GNAINEL---KFHPRD 127 (366)
T ss_dssp EEEEEEETTCE----E-----------------EEECT-------TTCCEEEEEE-----SC--CSCEEEE---EECSSC
T ss_pred CEEEEecCCCE----E-----------------EEEEc-------hhceEeeeec-----CC--CCcEEEE---EECCCC
Confidence 57888877766 9 99999 777666 66 89 9999999 9999 8
Q ss_pred CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942 240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH 319 (537)
Q Consensus 240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 319 (537)
+++|++++.|+.|+ +|++..+. .... ...+..|
T Consensus 128 ~~~l~s~~~dg~i~--iwd~~~~~-------------------------------------------~~~~--~~~~~~~ 160 (366)
T 3k26_A 128 PNLLLSVSKDHALR--LWNIQTDT-------------------------------------------LVAI--FGGVEGH 160 (366)
T ss_dssp TTEEEEEETTSCEE--EEETTTTE-------------------------------------------EEEE--ECSTTSC
T ss_pred CCEEEEEeCCCeEE--EEEeecCe-------------------------------------------EEEE--ecccccc
Confidence 89999999888888 88876621 1000 1112568
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEe----cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942 320 EKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRG----HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395 (537)
Q Consensus 320 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 395 (537)
...|.+++|+|++++|++++.|+.|++||++ ..+....+.. .+++..+...... . ..........|.
T Consensus 161 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~ 231 (366)
T 3k26_A 161 RDEVLSADYDLLGEKIMSCGMDHSLKLWRIN-SKRMMNAIKESYDYNPNKTNRPFISQK----I----HFPDFSTRDIHR 231 (366)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESC-SHHHHHHHHHHHTCCGGGCSSCCCCEE----E----CCCSEEECSSCS
T ss_pred cCceeEEEECCCCCEEEEecCCCCEEEEECC-CCccccccceeEEecCCCCccccccee----e----ccCccccccCCc
Confidence 8899999999999999999999999999998 3333222211 0110000000000 0 000111222233
Q ss_pred cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce--------------eeeEeecCCcceEEEE
Q psy10942 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV--------------CLKSLEGHDASVLRCH 461 (537)
Q Consensus 396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~v~~~~ 461 (537)
. .|.+++|+ ++++++++.|+.|++||+.+++ .+..+..|...|++++
T Consensus 232 ~-----------------~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 292 (366)
T 3k26_A 232 N-----------------YVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR 292 (366)
T ss_dssp S-----------------CCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCC
T ss_pred c-----------------eEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEE
Confidence 3 67888888 6799999999999999998763 4788889999999999
Q ss_pred EecC--CCEEEEEeCCCcEEEEECCCCe----eEEEecCC--ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942 462 FINK--GTQIVSTGADGLLKLWSIKTST----CVSTFDKH--ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ 533 (537)
Q Consensus 462 ~s~~--~~~l~s~~~dg~v~vwd~~~~~----~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~ 533 (537)
|+|+ +++|++++.||.|++||+.+++ ....+.+| ...| .++ +|+|++++|++++.||.
T Consensus 293 ~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v-----------~~~---~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 293 FSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAI-----------RQT---SFSRDSSILIAVCDDAS 358 (366)
T ss_dssp CEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCE-----------EEE---EECTTSSEEEEEETTSE
T ss_pred EcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCce-----------EEE---EeCCCCCeEEEEeCCCE
Confidence 9999 9999999999999999999875 44477777 6788 888 99999999999999999
Q ss_pred EEeC
Q psy10942 534 VVVY 537 (537)
Q Consensus 534 i~vW 537 (537)
|++|
T Consensus 359 i~iw 362 (366)
T 3k26_A 359 IWRW 362 (366)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 80
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-36 Score=292.62 Aligned_cols=319 Identities=10% Similarity=0.063 Sum_probs=214.6
Q ss_pred CCcceEEEecCcceEEEEEcCccceee----eec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee
Q psy10942 14 ITSEFSVHCGRDKVLFTWDLSSRKQLR----SYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK 88 (537)
Q Consensus 14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~ 88 (537)
|+++.|++++.|++|+|||+++++... .+. +...+..+ .++|.. ..++++.+|++++.||.|++||+.+++
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v--~wsp~~--~~~~~~~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDL--KWHEGC--HAPHLVGCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEE--EECSSC--CCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEE--EECCCC--CCCCCCceEEEEecCCeEEEEEcCCCc
Confidence 678899999999999999998876532 233 24556667 567731 011235799999999999999998764
Q ss_pred hh-----------hhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhh-
Q psy10942 89 EL-----------YQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI- 155 (537)
Q Consensus 89 ~~-----------~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 155 (537)
.. ..+..+ ..|.+++|+|++ .||+|+.||+|++||+.++ ......+.+|...|.++
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~----------~~~~~~~~~H~~~V~sv~ 315 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDP----------EVPSFYDQVHDSYILSVS 315 (524)
T ss_dssp SSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBC----------SSCSEEEECSSSCEEEEE
T ss_pred cccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCC----------CCceEEeecccccEEEEE
Confidence 32 233433 689999999875 7999999999999999873 24456788999999999
Q ss_pred -hcccCCC-ccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcC--eEE
Q psy10942 156 -ALLGEED-SHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELK--TVT 229 (537)
Q Consensus 156 -~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~--~v~ 229 (537)
+|+ +++ ..|++++.++. | ++||+ ++.++. +. +| .. .|.
T Consensus 316 ~~~s-~~g~~~laS~S~D~t----v-----------------klWD~-------~~~~~~~~~~-----~~--~~~~~v~ 359 (524)
T 2j04_B 316 TAYS-DFEDTVVSTVAVDGY----F-----------------YIFNP-------KDIATTKTTV-----SR--FRGSNLV 359 (524)
T ss_dssp EECC-TTSCCEEEEEETTSE----E-----------------EEECG-------GGHHHHCEEE-----EE--CSCCSCC
T ss_pred EEcC-CCCCeEEEEeccCCe----E-----------------EEEEC-------CCCCcccccc-----cc--cccCccc
Confidence 465 665 77888888777 9 99999 766655 44 66 43 578
Q ss_pred EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942 230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL 309 (537)
Q Consensus 230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~ 309 (537)
++ +|+|+++.+++++.|++++ +|++... ..
T Consensus 360 ~v---~fsp~~~~l~s~~~d~tv~--lwd~~~~-------------------------------------------~~-- 389 (524)
T 2j04_B 360 PV---VYCPQIYSYIYSDGASSLR--AVPSRAA-------------------------------------------FA-- 389 (524)
T ss_dssp CE---EEETTTTEEEEECSSSEEE--EEETTCT-------------------------------------------TC--
T ss_pred ce---EeCCCcCeEEEeCCCCcEE--EEECccc-------------------------------------------cc--
Confidence 89 9999998888888888787 7776652 11
Q ss_pred eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942 310 NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVS 389 (537)
Q Consensus 310 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 389 (537)
...+.+|.+.|++++|+|++++|++|+.|++|++||+. .. .+........ ..
T Consensus 390 ---~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~-~~-~~~~~~~~~~--------~~--------------- 441 (524)
T 2j04_B 390 ---VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAA-RR-LLHGIKNSSA--------TQ--------------- 441 (524)
T ss_dssp ---CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSC-SS-TTTCC--------------C---------------
T ss_pred ---ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEech-Hh-hccccccCcc--------ce---------------
Confidence 12234688999999999999999999999999999986 21 1110000000 00
Q ss_pred eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEEEEEecCCC-
Q psy10942 390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLRCHFINKGT- 467 (537)
Q Consensus 390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~- 467 (537)
+.. .+.+++|+|+++.+.. .. ...+|+.. ++..+..+.+|...|.+++|+|++.
T Consensus 442 ----~~~-----------------~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~ 497 (524)
T 2j04_B 442 ----KSL-----------------RLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAG 497 (524)
T ss_dssp ----CCC-----------------EEEECBCCSSSCEEEE-CC--CCCCCC-------------CCCSCCCEEECCSTTT
T ss_pred ----eee-----------------EEEEeccCCCCCeEEc-cC--CceecccccCCcceeeecCCCceEEEEECCCCCCc
Confidence 000 4567778888875532 22 23344433 4677888999999999999999954
Q ss_pred --EEEEEeCCCcEEEEECCC
Q psy10942 468 --QIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 468 --~l~s~~~dg~v~vwd~~~ 485 (537)
.+|+|+.||.|+||+++-
T Consensus 498 ~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 498 GKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp TTEEEEECTTSEEEEEECSC
T ss_pred cHHHHhhccCceEEEEEccc
Confidence 999999999999999853
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.6e-34 Score=279.07 Aligned_cols=316 Identities=14% Similarity=0.166 Sum_probs=245.8
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE 83 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd 83 (537)
++|+.|. +++|++|+.||.|++||+++++.+..+. +..++.++ .+.| ++ ++++++.||.|++||
T Consensus 125 ~~~~~~~----~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l--~~~~--------~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 125 ITCLQFE----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWAL--KYAH--------GG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEEE----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE--EECS--------TT-EEEEEETTSCEEEEE
T ss_pred EEEEEEC----CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEE--EEcC--------CC-EEEEEeCCCCEEEEE
Confidence 4565554 4699999999999999999999999887 66677777 5566 43 899999999999999
Q ss_pred ccceehhhhcCCC-cceEEEEEe--ccccEEEEEeCCceEEEEecccccCccc------------ccccccceeEEeecc
Q psy10942 84 TSAVKELYQHGLS-SPLVRIVRS--SVKRMYAVVTADHNISLYRLNSETGLEE------------RPNKILKFRKQFVGF 148 (537)
Q Consensus 84 ~~~~~~~~~~~~~-~~v~~~~~s--~~~~~la~~~~d~~i~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~ 148 (537)
+.+++.+..+..| +.|.+++|+ +++++|++++.|+.|++||+.+...... .+.........+.+|
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 9999999888855 799999998 5889999999999999999987432210 011111236677888
Q ss_pred hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcC
Q psy10942 149 SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELK 226 (537)
Q Consensus 149 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~ 226 (537)
...+.++. ++++.+++++.++. | ++||+ .+++.. +. +| ..
T Consensus 270 ~~~v~~~~---~~~~~l~~~~~d~~----i-----------------~vwd~-------~~~~~~~~~~-----~~--~~ 311 (464)
T 3v7d_B 270 MASVRTVS---GHGNIVVSGSYDNT----L-----------------IVWDV-------AQMKCLYILS-----GH--TD 311 (464)
T ss_dssp SSCEEEEE---EETTEEEEEETTSC----E-----------------EEEET-------TTTEEEEEEC-----CC--SS
T ss_pred cceEEEEc---CCCCEEEEEeCCCe----E-----------------EEEEC-------CCCcEEEEec-----CC--CC
Confidence 88887763 55788888887777 9 99999 777766 66 89 99
Q ss_pred eEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCc
Q psy10942 227 TVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGL 306 (537)
Q Consensus 227 ~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~ 306 (537)
.|.++ +|+|+++++++++.|+.|+ +|++..+ +
T Consensus 312 ~v~~~---~~~~~~~~l~sg~~dg~i~--vwd~~~~-------------------------------------------~ 343 (464)
T 3v7d_B 312 RIYST---IYDHERKRCISASMDTTIR--IWDLENG-------------------------------------------E 343 (464)
T ss_dssp CEEEE---EEETTTTEEEEEETTSCEE--EEETTTT-------------------------------------------E
T ss_pred CEEEE---EEcCCCCEEEEEeCCCcEE--EEECCCC-------------------------------------------c
Confidence 99999 9999999999998888888 8877652 1
Q ss_pred eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942 307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST 386 (537)
Q Consensus 307 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 386 (537)
. ...+.+|...|.+++|+ +++|++++.||.|++||+.. ........ +..
T Consensus 344 ~-----~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~---------------------- 392 (464)
T 3v7d_B 344 L-----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTN---------------------- 392 (464)
T ss_dssp E-----EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTT----------------------
T ss_pred E-----EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCC----------------------
Confidence 1 22335688899999997 57999999999999999983 22221111 111
Q ss_pred eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-eecCCcceEEEEEecC
Q psy10942 387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LEGHDASVLRCHFINK 465 (537)
Q Consensus 387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~ 465 (537)
.+..++|+|+++++++++ ||.|++||+.+++.+.. +..|...|.+++|+ +
T Consensus 393 ---------------------------~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~ 443 (464)
T 3v7d_B 393 ---------------------------LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-G 443 (464)
T ss_dssp ---------------------------CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-T
T ss_pred ---------------------------CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-C
Confidence 556678899999999998 89999999999998876 66788999999998 3
Q ss_pred CCEEEEEeCCCcEEEE
Q psy10942 466 GTQIVSTGADGLLKLW 481 (537)
Q Consensus 466 ~~~l~s~~~dg~v~vw 481 (537)
..++++++.||.+.+|
T Consensus 444 ~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 444 KTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TEEEEEEEETTEEEEE
T ss_pred CEEEEEEEeCCeEEEE
Confidence 3455566667765544
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.9e-35 Score=278.49 Aligned_cols=304 Identities=14% Similarity=0.089 Sum_probs=234.8
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee--hhhhcCCC-cceEEEEEeccccEEEEEeCCceE
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNI 120 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i 120 (537)
+.+++.++ .+.| +++++++++.++.|++||+.+++ .+..+..| +.|.+++|+|++++|++++.|+.|
T Consensus 7 ~~~~i~~~--~~s~--------~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 7 LVEPISCH--AWNK--------DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp CSSCCCEE--EECT--------TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCCCeEEE--EECC--------CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 45677777 5677 66899999999999999999987 77777644 699999999999999999999999
Q ss_pred EEEecccccCccccccccccee--EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHH
Q psy10942 121 SLYRLNSETGLEERPNKILKFR--KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTF 198 (537)
Q Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~w 198 (537)
++||+.+ .+.. ..+..|...|.+++|+ ++++++++++.++. + ++|
T Consensus 77 ~vwd~~~-----------~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~----v-----------------~i~ 123 (372)
T 1k8k_C 77 YVWTLKG-----------RTWKPTLVILRINRAARCVRWA-PNEKKFAVGSGSRV----I-----------------SIC 123 (372)
T ss_dssp EEEEEET-----------TEEEEEEECCCCSSCEEEEEEC-TTSSEEEEEETTSS----E-----------------EEE
T ss_pred EEEECCC-----------CeeeeeEEeecCCCceeEEEEC-CCCCEEEEEeCCCE----E-----------------EEE
Confidence 9999987 3433 3446788899999999 77888888887776 9 999
Q ss_pred HHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccccccee
Q psy10942 199 ERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHG 277 (537)
Q Consensus 199 d~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~ 277 (537)
|+ ...... .......+| ...|.++ +|+|++++|++++.|+.++ +|++......... .
T Consensus 124 d~-------~~~~~~~~~~~~~~~~--~~~i~~~---~~~~~~~~l~~~~~dg~i~--~~d~~~~~~~~~~-----~--- 181 (372)
T 1k8k_C 124 YF-------EQENDWWVCKHIKKPI--RSTVLSL---DWHPNSVLLAAGSCDFKCR--IFSAYIKEVEERP-----A--- 181 (372)
T ss_dssp EE-------ETTTTEEEEEEECTTC--CSCEEEE---EECTTSSEEEEEETTSCEE--EEECCCTTTSCCC-----C---
T ss_pred Ee-------cCCCcceeeeeeeccc--CCCeeEE---EEcCCCCEEEEEcCCCCEE--EEEcccccccccc-----c---
Confidence 98 655421 111111278 8999999 9999999999999999999 9998653211100 0
Q ss_pred eeeeCCcceEEEEEeCCCeEEEEE--CCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942 278 AFYTGGTVELLASGSLDKTVKVWS--TTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL 355 (537)
Q Consensus 278 ~~~~~~~v~~l~~~~~d~~i~i~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~ 355 (537)
...|. ...++. ...+..|...|.+++|+|++++|++++.|+.|++||+. ..+.
T Consensus 182 -------------------~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 236 (372)
T 1k8k_C 182 -------------------PTPWGSKMPFGEL-----MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-KKMA 236 (372)
T ss_dssp -------------------CBTTBSCCCTTCE-----EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG-GTTE
T ss_pred -------------------ccccccccchhhh-----eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC-CCce
Confidence 00011 112222 23345788999999999999999999999999999998 4555
Q ss_pred eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942 356 LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT 435 (537)
Q Consensus 356 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (537)
+..+..|.. .+.+++|+|++++++++ .|+.
T Consensus 237 ~~~~~~~~~-------------------------------------------------~v~~~~~~~~~~~l~~~-~d~~ 266 (372)
T 1k8k_C 237 VATLASETL-------------------------------------------------PLLAVTFITESSLVAAG-HDCF 266 (372)
T ss_dssp EEEEECSSC-------------------------------------------------CEEEEEEEETTEEEEEE-TTSS
T ss_pred eEEEccCCC-------------------------------------------------CeEEEEEecCCCEEEEE-eCCe
Confidence 555554433 78889999999988888 8999
Q ss_pred EEEEECCC--cee--e------------------------------------eEe-ecCCcceEEEEEe-cCC---CEEE
Q psy10942 436 IKLWCLTD--YVC--L------------------------------------KSL-EGHDASVLRCHFI-NKG---TQIV 470 (537)
Q Consensus 436 i~i~d~~~--~~~--~------------------------------------~~~-~~~~~~v~~~~~s-~~~---~~l~ 470 (537)
|++|++.+ ++. + ..+ .+|...|++++|+ +++ ++|+
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~ 346 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 346 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence 99999987 421 0 223 4899999999976 566 9999
Q ss_pred EEeCCCcEEEEECCCCe
Q psy10942 471 STGADGLLKLWSIKTST 487 (537)
Q Consensus 471 s~~~dg~v~vwd~~~~~ 487 (537)
+++.||.|++|++.+++
T Consensus 347 s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 347 TTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEETTSEEEEEEHHHHH
T ss_pred EecCCCceEEEEecChh
Confidence 99999999999987654
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=267.58 Aligned_cols=292 Identities=15% Similarity=0.155 Sum_probs=233.6
Q ss_pred ceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC-CcceEEEEEeccccEEEEE
Q psy10942 37 KQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL-SSPLVRIVRSSVKRMYAVV 114 (537)
Q Consensus 37 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~ 114 (537)
+.++.+. +..++.++ .+ | ++.++++++.||.|++||+.+++....+.. .+.|.+++|+|++++|+++
T Consensus 9 ~~~~~l~~h~~~v~~~--~~-~--------~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 77 (313)
T 3odt_A 9 QLSATLKGHDQDVRDV--VA-V--------DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFG 77 (313)
T ss_dssp EEEEEECCCSSCEEEE--EE-E--------ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred HHHHHhhCCCCCcEEE--Ee-c--------CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEe
Confidence 5555565 55667777 44 5 456899999999999999998887776664 4799999999999999999
Q ss_pred eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhh
Q psy10942 115 TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWF 194 (537)
Q Consensus 115 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 194 (537)
+.|+.|++|++..... .+....+.+|...|.+++|. ++.+++++.++. +
T Consensus 78 ~~dg~i~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~----i---------------- 126 (313)
T 3odt_A 78 GKDTMINGVPLFATSG--------EDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKT----A---------------- 126 (313)
T ss_dssp ETTSCEEEEETTCCTT--------SCC-CEECCCSSCEEEEEEE---TTEEEEEETTSE----E----------------
T ss_pred cCCCeEEEEEeeecCC--------CCcccchhhcccCEEEEEec---CCEEEEEeCCCC----E----------------
Confidence 9999999999876311 35567888999999999995 667888887776 9
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCccc-CCCeeeeccCCCcceeccccccCCCcccccccccc
Q psy10942 195 DKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE 273 (537)
Q Consensus 195 ~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~ 273 (537)
++||. ......+. .| ...+.++ .++| +++++++++.|+.++ +|+...
T Consensus 127 -~~~d~-------~~~~~~~~-----~~--~~~v~~~---~~~~~~~~~l~~~~~d~~i~--i~d~~~------------ 174 (313)
T 3odt_A 127 -KVWKE-------GSLVYNLQ-----AH--NASVWDA---KVVSFSENKFLTASADKTIK--LWQNDK------------ 174 (313)
T ss_dssp -EEEET-------TEEEEEEE-----CC--SSCEEEE---EEEETTTTEEEEEETTSCEE--EEETTE------------
T ss_pred -EEEcC-------CcEEEecc-----cC--CCceeEE---EEccCCCCEEEEEECCCCEE--EEecCc------------
Confidence 99985 44434466 88 9999999 8888 888888888888888 887322
Q ss_pred cceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy10942 274 AEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL 353 (537)
Q Consensus 274 ~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~ 353 (537)
.+. .....|...+.+++|+|++. +++++.|+.|++||++ ..
T Consensus 175 ----------------------~~~---------------~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~-~~ 215 (313)
T 3odt_A 175 ----------------------VIK---------------TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH-TG 215 (313)
T ss_dssp ----------------------EEE---------------EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT-TC
T ss_pred ----------------------eEE---------------EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC-ch
Confidence 000 01122678899999999998 8999999999999998 55
Q ss_pred eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942 354 KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD 433 (537)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (537)
+.+..+..|.. .+.+++|+|++ .|++++.|
T Consensus 216 ~~~~~~~~~~~-------------------------------------------------~i~~~~~~~~~-~l~~~~~d 245 (313)
T 3odt_A 216 DVLRTYEGHES-------------------------------------------------FVYCIKLLPNG-DIVSCGED 245 (313)
T ss_dssp CEEEEEECCSS-------------------------------------------------CEEEEEECTTS-CEEEEETT
T ss_pred hhhhhhhcCCc-------------------------------------------------eEEEEEEecCC-CEEEEecC
Confidence 55555554433 78899999999 58899999
Q ss_pred CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942 434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 492 (537)
|.|++||+.+++++..+..|...|.+++|+|+++ +++++.||.|++||+++++.....
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 9999999999999999999999999999999998 667999999999999887765443
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=263.18 Aligned_cols=269 Identities=14% Similarity=0.192 Sum_probs=210.2
Q ss_pred EEEEeCccceEEeeeccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942 69 FVLAGGEKSLLHYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF 145 (537)
Q Consensus 69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 145 (537)
+|+++ .|+.|++||+.+++++..+..+ ..|.+++|+|++++||+|+.|++|++||+.+ ++.+..+
T Consensus 38 ~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-----------~~~~~~~ 105 (318)
T 4ggc_A 38 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-----------QKRLRNM 105 (318)
T ss_dssp EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------TEEEEEE
T ss_pred EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC-----------ceeEEEe
Confidence 56655 5999999999999987766532 5799999999999999999999999999999 7888999
Q ss_pred ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc---ccccccccC
Q psy10942 146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ---KHNTERLGR 222 (537)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~---l~~~~~~~h 222 (537)
.+|...+.++.+. +..+++++.++. + ++|+. ...... +. +|
T Consensus 106 ~~h~~~~~~~~~~---~~~l~s~~~~~~----~-----------------~~~~~-------~~~~~~~~~~~-----~~ 149 (318)
T 4ggc_A 106 TSHSARVGSLSWN---SYILSSGSRSGH----I-----------------HHHDV-------RVAEHHVATLS-----GH 149 (318)
T ss_dssp ECCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEET-------TSSSCEEEEEE-----CC
T ss_pred cCccceEEEeecC---CCEEEEEecCCc----e-----------------Eeeec-------CCCceeEEEEc-----Cc
Confidence 9999877766554 567777776665 7 66766 443332 55 89
Q ss_pred CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
...+..+ .++++++++++++.|+.++ +|++..+......
T Consensus 150 --~~~~~~~---~~~~~~~~l~s~~~d~~i~--iwd~~~~~~~~~~---------------------------------- 188 (318)
T 4ggc_A 150 --SQEVCGL---RWAPDGRHLASGGNDNLVN--VWPSAPGEGGWVP---------------------------------- 188 (318)
T ss_dssp --SSCEEEE---EECTTSSEEEEEETTSCEE--EEESSCBTTBSCC----------------------------------
T ss_pred --cCceEEE---EEcCCCCEEEEEecCccee--EEECCCCcccccc----------------------------------
Confidence 9999999 9999999999999999999 9988763211000
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCCCCEE---EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEE
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL---ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKL 379 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l---~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 379 (537)
......+...|.+++++|++..+ ++++.++.|++||.. ......... +
T Consensus 189 ----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~-~~~~~~~~~-~----------------- 239 (318)
T 4ggc_A 189 ----------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLSAVD-A----------------- 239 (318)
T ss_dssp ----------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT-TCCEEEEEE-C-----------------
T ss_pred ----------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc-ccccccccc-c-----------------
Confidence 12234566789999999876533 345567778888876 322222211 1
Q ss_pred EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe--CCCcEEEEECCCceeeeEeecCCcce
Q psy10942 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS--GDATIKLWCLTDYVCLKSLEGHDASV 457 (537)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v 457 (537)
.. .+..+.|+|+++.+++++ .|+.|++||+.+++++.++.+|.+.|
T Consensus 240 --------------~~------------------~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V 287 (318)
T 4ggc_A 240 --------------HS------------------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 287 (318)
T ss_dssp --------------SS------------------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred --------------ee------------------eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 11 677788889888887765 78999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 458 LRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
++++|+|++++|++++.||+|+|||+.+..
T Consensus 288 ~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 288 LSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999999999999987643
No 85
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-33 Score=272.41 Aligned_cols=276 Identities=18% Similarity=0.269 Sum_probs=220.2
Q ss_pred ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee--cchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942 98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GFSDEILDIALLGEEDSHIVVASNEYLNG 175 (537)
Q Consensus 98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~ 175 (537)
....|+||+++ +||+|. |++|+|||..+ ++..+.+. +|...|++++|+ +++++|++++.++.
T Consensus 107 y~~~l~wS~~n-~lAvgl-d~tV~lWd~~t-----------g~~~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~-- 170 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL-DNSVYLWSASS-----------GDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAE-- 170 (420)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTT-----------CCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSC--
T ss_pred cceeEEECCCC-EEEEEe-CCEEEEEECCC-----------CCEEEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCe--
Confidence 46679999864 777765 89999999999 56666554 677789999999 78899999888877
Q ss_pred CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942 176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL 253 (537)
Q Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~ 253 (537)
| ++||+ +++++. +. +| ...+.++ ++ ++..+++|+.|+.++
T Consensus 171 --v-----------------~iWd~-------~~~~~~~~~~-----~h--~~~v~~~---s~--~~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 171 --V-----------------QLWDV-------QQQKRLRNMT-----SH--SARVGSL---SW--NSYILSSGSRSGHIH 212 (420)
T ss_dssp --E-----------------EEEET-------TTTEEEEEEC-----CC--SSCEEEE---EE--ETTEEEEEETTSEEE
T ss_pred --E-----------------EEEEc-------CCCcEEEEEe-----CC--CCceEEE---ee--CCCEEEEEeCCCcee
Confidence 9 99999 877776 66 89 8888888 54 456777777777777
Q ss_pred eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942 254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK 333 (537)
Q Consensus 254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 333 (537)
+|+.... ... ...+.+|...+..+.++|+++
T Consensus 213 --~~d~~~~-------------------------------------------~~~----~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 213 --HHDVRVA-------------------------------------------EHH----VATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp --EEETTSS-------------------------------------------SCE----EEEEECCSSCEEEEEECTTSS
T ss_pred --Eeeeccc-------------------------------------------cee----eEEecccccceeeeeecCCCC
Confidence 7765542 111 223457888999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942 334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413 (537)
Q Consensus 334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 413 (537)
++++++.|+.+++|+........ ..+.....+..
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~~-----------------------------~~~~~~~~~~~----------------- 277 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGGW-----------------------------VPLQTFTQHQG----------------- 277 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSCS-----------------------------CCSEEECCCSS-----------------
T ss_pred eeeeeeccccceEEeeccccccc-----------------------------eeeeeecccCC-----------------
Confidence 99999999999999987322110 11122223333
Q ss_pred eeeEEEEcCCC-CEEEEE--eCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCee
Q psy10942 414 GVWFVNFSPLD-RILISS--SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTC 488 (537)
Q Consensus 414 ~i~~~~~s~~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~ 488 (537)
.|.+++|+|++ .+++++ +.|+.|++||+.+++++..+..| ..+.++.|+|+++.+++++ .|+.|+|||+.++++
T Consensus 278 ~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 278 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence 67777787765 455554 57999999999999999988855 5689999999999998775 689999999999999
Q ss_pred EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+..+.+|...| +++ +|+|||++|+||+.|++|+||
T Consensus 357 v~~l~gH~~~V-----------~~l---~~spdg~~l~S~s~D~tvriW 391 (420)
T 4gga_A 357 VAELKGHTSRV-----------LSL---TMSPDGATVASAAADETLRLW 391 (420)
T ss_dssp EEEECCCSSCE-----------EEE---EECTTSSCEEEEETTTEEEEE
T ss_pred EEEEcCCCCCE-----------EEE---EEcCCCCEEEEEecCCeEEEE
Confidence 99999999999 999 999999999999999999999
No 86
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.3e-32 Score=245.69 Aligned_cols=292 Identities=11% Similarity=0.103 Sum_probs=204.4
Q ss_pred ceEEEEEeccc-c--EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 98 PLVRIVRSSVK-R--MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 98 ~v~~~~~s~~~-~--~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
.+.++.|-..| + .++++++ ..|++|+...+ ...+.++++..|+.+|..++|.|..-+.+.++- +.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~- 108 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDA--------WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL--GN- 108 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSS--------SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE--CS-
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCC--------ccceeeEEEeccCceeEEEEEcCcccceeeeee--cc-
Confidence 45566664333 2 4667766 67999999982 113889999999999999999954444443332 11
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccC----CCeeeeccCCC
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE----EDLFPRQSMEP 250 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~----~~~l~~~~~d~ 250 (537)
+ + ...|.++ +++|+ ++++++++.+
T Consensus 109 ---~-------------------------------------------~--~~~v~sl---a~spd~~~~~~~l~s~g~~- 136 (356)
T 2w18_A 109 ---L-------------------------------------------E--IREIRAL---FCSSDDESEKQVLLKSGNI- 136 (356)
T ss_dssp ---S-------------------------------------------S--EEEEEEE---CC------CCEEEEEEEEE-
T ss_pred ---c-------------------------------------------c--ccceEEE---EECCCccccccEEEeCCCe-
Confidence 2 2 6779999 99999 9999998744
Q ss_pred cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe--CCCeEEEEECCC-CceeeeeecccccccCCCeEEEE
Q psy10942 251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS--LDKTVKVWSTTG-GLKLLNVLRGHKKGHEKDINCVT 327 (537)
Q Consensus 251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~d~~i~i~~~~~-~~~~~~~~~~~~~~~~~~v~~~~ 327 (537)
++ +|++.++ +.+.+++ .|+.|++|++.. ++. ...+..|...++.++
T Consensus 137 -~~--v~~l~~g-----------------------~lv~ss~~g~d~~V~~~~~s~dG~~-----~~s~~~~~~~v~~l~ 185 (356)
T 2w18_A 137 -KA--VLGLTKR-----------------------RLVSSSGTLSDQQVEVMTFAEDGGG-----KENQFLMPPEETILT 185 (356)
T ss_dssp -EE--EEEETTT-----------------------EEEEEESSSTTCEEEEEEECTTSCE-----EEEEEECCCSSCEEE
T ss_pred -EE--EEecCCC-----------------------cEEEecccCCCCcEEEEEECCCCce-----eeeeccCCCceeeEE
Confidence 77 8887552 2344433 599999999944 543 334568888899999
Q ss_pred EcC---CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942 328 VSP---NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404 (537)
Q Consensus 328 ~s~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 404 (537)
|+| ++.+|++++.|++|++||+. .++.+..+..|.. +...+.+++|+
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~-TGk~l~tL~g~~~-----------------------------~v~~v~~vafS 235 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLK-TGQLLKKMHIDDS-----------------------------YQASVCHKAYS 235 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETT-TCCEEEEEECCC--------------------------------CCCEEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECC-CCcEEEEEcCCCc-----------------------------ceeeeEEEEEC
Confidence 999 77999999999999999998 6667776654321 11234455566
Q ss_pred cCCCceEEeeeeEEEEc-CC-CCEEEEEeCCCcEEEEECCCceeeeEe-----ecCCcceEEEEEecCCCEEEEEeCCCc
Q psy10942 405 KDENQIITGGVWFVNFS-PL-DRILISSSGDATIKLWCLTDYVCLKSL-----EGHDASVLRCHFINKGTQIVSTGADGL 477 (537)
Q Consensus 405 ~~~~~~~~~~i~~~~~s-~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~~~dg~ 477 (537)
|++..+++ ++ ++ ...+++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++|+++.|++
T Consensus 236 pdG~~lvs-------~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT 306 (356)
T 2w18_A 236 EMGLLFIV-------LSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGT 306 (356)
T ss_dssp ETTEEEEE-------EC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSC
T ss_pred CCCCEEEE-------eccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCc
Confidence 65443322 11 11 124678999999999999999887765 3676665555544 789999999999
Q ss_pred EEEEECCCCeeEEEecCCccceeccCCCCCCccc-cccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 478 LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGF-GLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 478 v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
|+|||+.+++++.++.+|...+ . .+ +|||||++|++|+.|++|+||
T Consensus 307 IkIWDl~tGk~l~tL~gH~~~v-----------vs~v---afSPDG~~LaSGS~D~TIklW 353 (356)
T 2w18_A 307 IAIWDLLLGQCTALLPPVSDQH-----------WSFV---KWSGTDSHLLAGQKDGNIFVY 353 (356)
T ss_dssp EEEEETTTCSEEEEECCC--CC-----------CCEE---EECSSSSEEEEECTTSCEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCe-----------EEEE---EECCCCCEEEEEECCCcEEEe
Confidence 9999999999999999998766 4 47 999999999999999999999
No 87
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-34 Score=274.19 Aligned_cols=272 Identities=15% Similarity=0.187 Sum_probs=216.6
Q ss_pred EEEEeCccceEEeeeccceehhhhcCC--CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942 69 FVLAGGEKSLLHYYETSAVKELYQHGL--SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV 146 (537)
Q Consensus 69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~--~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 146 (537)
.+++++.++.|++||+.+++....+.. .+.|.+++|+|++++|++++.||.|++||+.+ .+.+..+.
T Consensus 105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~-----------~~~~~~~~ 173 (401)
T 4aez_A 105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES-----------QTKLRTMA 173 (401)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------CCEEEEEC
T ss_pred CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC-----------CeEEEEec
Confidence 477788899999999999987766654 46899999999999999999999999999998 68888999
Q ss_pred cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc-c--ccccccccCC
Q psy10942 147 GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-Q--KHNTERLGRD 223 (537)
Q Consensus 147 ~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-~--l~~~~~~~h~ 223 (537)
+|...|.+++|+ ++.+++++.++. | ++||+ ..... . +. +|
T Consensus 174 ~~~~~v~~~~~~---~~~l~~~~~dg~----i-----------------~i~d~-------~~~~~~~~~~~-----~~- 216 (401)
T 4aez_A 174 GHQARVGCLSWN---RHVLSSGSRSGA----I-----------------HHHDV-------RIANHQIGTLQ-----GH- 216 (401)
T ss_dssp CCSSCEEEEEEE---TTEEEEEETTSE----E-----------------EEEET-------TSSSCEEEEEE-----CC-
T ss_pred CCCCceEEEEEC---CCEEEEEcCCCC----E-----------------EEEec-------ccCcceeeEEc-----CC-
Confidence 999999999996 567888777766 9 99999 63332 2 66 89
Q ss_pred CcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942 224 ELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT 303 (537)
Q Consensus 224 ~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~ 303 (537)
...|.++ +|+|++++|++++.|+.++ +|++...
T Consensus 217 -~~~v~~~---~~~~~~~~l~s~~~d~~v~--iwd~~~~----------------------------------------- 249 (401)
T 4aez_A 217 -SSEVCGL---AWRSDGLQLASGGNDNVVQ--IWDARSS----------------------------------------- 249 (401)
T ss_dssp -SSCEEEE---EECTTSSEEEEEETTSCEE--EEETTCS-----------------------------------------
T ss_pred -CCCeeEE---EEcCCCCEEEEEeCCCeEE--EccCCCC-----------------------------------------
Confidence 9999999 9999999999999888888 8887652
Q ss_pred CCceeeeeecccccccCCCeEEEEEcCCCC-EEEEEe--CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942 304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGS--LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW 380 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 380 (537)
.. ...+..|...|.+++|+|++. ++++++ .|+.|++||+. ..+.+..+.. ..
T Consensus 250 --~~-----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~-~~~~~~~~~~-~~---------------- 304 (401)
T 4aez_A 250 --IP-----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA-TGARVNTVDA-GS---------------- 304 (401)
T ss_dssp --SE-----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT-TCCEEEEEEC-SS----------------
T ss_pred --Cc-----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC-CCCEEEEEeC-CC----------------
Confidence 11 112346788899999999764 555554 68889999887 4444443321 11
Q ss_pred ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE--eCCCcEEEEECCCceee--eEeecCCcc
Q psy10942 381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS--SGDATIKLWCLTDYVCL--KSLEGHDAS 456 (537)
Q Consensus 381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~d~~~~~~~--~~~~~~~~~ 456 (537)
.+.+++|+|++++++++ +.||.|++||+.+++.. ..+.+|...
T Consensus 305 ---------------------------------~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 305 ---------------------------------QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp ---------------------------------CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred ---------------------------------cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 78889999999999995 48999999999985544 457789999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493 (537)
Q Consensus 457 v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 493 (537)
|.+++|+|++++|++++.||.|++|++.+++.+....
T Consensus 352 v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 352 VLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp CCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9999999999999999999999999999988776543
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.8e-35 Score=281.80 Aligned_cols=284 Identities=13% Similarity=0.073 Sum_probs=211.5
Q ss_pred eeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec---cccccceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP---AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLL 79 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 79 (537)
..|+||+|+| .++++|++|+.||.|+|||+.+++....+. +..+|.++ .+.|. ++.+|++++.||.|
T Consensus 120 ~~V~~l~~~P-~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l--~f~p~-------~~~~l~s~s~D~~v 189 (435)
T 4e54_B 120 RRATSLAWHP-THPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGL--KFNPL-------NTNQFYASSMEGTT 189 (435)
T ss_dssp SCEEEEEECS-SCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEE--EECSS-------CTTEEEEECSSSCE
T ss_pred CCEEEEEEeC-CCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEE--EEeCC-------CCCEEEEEeCCCEE
Confidence 3599999995 366799999999999999998876554333 66788888 56875 66799999999999
Q ss_pred EeeeccceehhhhcCCC---cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhh
Q psy10942 80 HYYETSAVKELYQHGLS---SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIA 156 (537)
Q Consensus 80 ~~wd~~~~~~~~~~~~~---~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (537)
++||++++........+ ..+.+++|+|++++|++|+.|+.|++||+.+ +.+..+.+|...|.+++
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------------~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------------KELWNLRMHKKKVTHVA 257 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------------CBCCCSBCCSSCEEEEE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------------ceeEEEecccceEEeee
Confidence 99999876543333332 3688999999999999999999999999876 44567889999999999
Q ss_pred cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCc
Q psy10942 157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKT 236 (537)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~ 236 (537)
|+|.....+++++.++. | ++||+ ...+.........+| ...|.++ +|
T Consensus 258 ~~p~~~~~~~s~s~d~~----v-----------------~iwd~-------~~~~~~~~~~~~~~h--~~~v~~~---~~ 304 (435)
T 4e54_B 258 LNPCCDWFLATASVDQT----V-----------------KIWDL-------RQVRGKASFLYSLPH--RHPVNAA---CF 304 (435)
T ss_dssp ECTTCSSEEEEEETTSB----C-----------------CEEET-------TTCCSSSCCSBCCBC--SSCEEEC---CB
T ss_pred ecCCCceEEEEecCcce----e-----------------eEEec-------ccccccceEEEeeec--cccccce---eE
Confidence 99544456667776766 9 99998 665543111122389 9999999 99
Q ss_pred ccCCCeeeeccCCCcceeccccccCCCcccccccccc-----cc--eeeeeeCCcceEEEEE------------eCCCeE
Q psy10942 237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPE-----AE--HGAFYTGGTVELLASG------------SLDKTV 297 (537)
Q Consensus 237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~v~~l~~~------------~~d~~i 297 (537)
+|+|++|++++.|+.|+ +|++.............. .. ....+... ..++++ ..++.|
T Consensus 305 spdg~~l~s~~~D~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~i 380 (435)
T 4e54_B 305 SPDGARLLTTDQKSEIR--VYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRY--NLIVVGRYPDPNFKSCTPYELRTI 380 (435)
T ss_dssp CTTSSEEEEEESSSCEE--EEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSS--SCEEEECCCCTTSCCSSTTCCCCE
T ss_pred CCCCCeeEEEcCCCEEE--EEECCCCccceEEecccccccccceeEEEEEcCCC--CEEEEEEcCCCCeEEEEecCCCEE
Confidence 99999999999999999 999987543221100000 00 00111111 223333 244689
Q ss_pred EEEECCCCceeeeeecccccccCCCeEEE-EEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942 298 KVWSTTGGLKLLNVLRGHKKGHEKDINCV-TVSPNDKLLASGSLDKTVKVWSTT 350 (537)
Q Consensus 298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~~d~~i~i~d~~ 350 (537)
++||..+++.... ...+|...|.++ +|+|+|++|++|+ |+.|++|+++
T Consensus 381 ~iwd~~~g~~~~~----l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 381 DVFDGNSGKMMCQ----LYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp EEECSSSCCEEEE----ECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred EEEECCCCcEEEE----EeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence 9999999876432 245688888887 6999999999876 7899999998
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.9e-34 Score=260.50 Aligned_cols=258 Identities=17% Similarity=0.216 Sum_probs=191.0
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYL 173 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~ 173 (537)
+.+.|.+++|+|+|++||+++.|++|+|||+.+.. .+.+..+.+|.+.|.+++|+++ +++.|++++.++.
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~---------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET---------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC---------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC---------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 34689999999999999999999999999997521 3567889999999999999854 4678888888777
Q ss_pred cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc--c--ccccccccCCCcCeEEEEeccCcccC--CCeeeecc
Q psy10942 174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ--Q--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQS 247 (537)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~--~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~ 247 (537)
| ++||+ ++++. . +. +| ...|.++ +|+|+ +.+|++++
T Consensus 79 ----v-----------------~iWd~-------~~~~~~~~~~~~-----~h--~~~v~~v---~~~p~~~g~~l~s~s 120 (297)
T 2pm7_B 79 ----V-----------------MIWKE-------ENGRWSQIAVHA-----VH--SASVNSV---QWAPHEYGPMLLVAS 120 (297)
T ss_dssp ----E-----------------EEEEB-------SSSCBCCCEEEC-----CC--SSCEEEE---EECCGGGCSEEEEEE
T ss_pred ----E-----------------EEEEc-------CCCceEEEEEee-----cC--CCceeEE---EeCcCCCCcEEEEEE
Confidence 9 99998 66532 2 45 89 9999999 99997 78888888
Q ss_pred CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942 248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT 327 (537)
Q Consensus 248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 327 (537)
.|+.++ +|++...... . ...+.+|...|.+++
T Consensus 121 ~d~~v~--~wd~~~~~~~-----------------------------------------~-----~~~~~~h~~~v~~~~ 152 (297)
T 2pm7_B 121 SDGKVS--VVEFKENGTT-----------------------------------------S-----PIIIDAHAIGVNSAS 152 (297)
T ss_dssp TTSEEE--EEEBCSSSCB-----------------------------------------C-----CEEEECCSSCEEEEE
T ss_pred CCCcEE--EEEecCCCce-----------------------------------------e-----eeeeecccCccceEe
Confidence 888888 8887652100 0 112356888899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe----eeeeeccCCcceEEEEE
Q psy10942 328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST----CVSTFDKHALKIWTLAI 403 (537)
Q Consensus 328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~ 403 (537)
|+|++..- ++. .....++.++++++.|++|++||+++++ ....+.+|..
T Consensus 153 ~~p~~~~~-----~~~---------------~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~------- 205 (297)
T 2pm7_B 153 WAPATIEE-----DGE---------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD------- 205 (297)
T ss_dssp ECCCC--------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-------
T ss_pred ecCCcccc-----ccc---------------CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC-------
Confidence 99974210 000 0001224455556666666666555443 3445556655
Q ss_pred ecCCCceEEeeeeEEEEcCCC---CEEEEEeCCCcEEEEECCCce---eeeEe--ecCCcceEEEEEecCCCEEEEEeCC
Q psy10942 404 TKDENQIITGGVWFVNFSPLD---RILISSSGDATIKLWCLTDYV---CLKSL--EGHDASVLRCHFINKGTQIVSTGAD 475 (537)
Q Consensus 404 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d 475 (537)
.|.+++|+|++ ++|++++.|++|++||+.+.. ....+ ..|...|.+++|+|++++||+++.|
T Consensus 206 ----------~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 206 ----------WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp ----------CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred ----------ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence 67788888874 899999999999999987642 11223 4678899999999999999999999
Q ss_pred CcEEEEECC
Q psy10942 476 GLLKLWSIK 484 (537)
Q Consensus 476 g~v~vwd~~ 484 (537)
+.|++|+..
T Consensus 276 ~~v~lw~~~ 284 (297)
T 2pm7_B 276 NKVTLWKEN 284 (297)
T ss_dssp SCEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999999976
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-33 Score=271.50 Aligned_cols=272 Identities=16% Similarity=0.195 Sum_probs=219.1
Q ss_pred ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-chhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-FSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
.+.+++|++ ..+++++.|+.|++||+.+ ++....+.. |...|.+++|+ +++.+|++++.++.
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~-----------~~~~~~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~--- 157 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADS-----------GSVSALAETDESTYVASVKWS-HDGSFLSVGLGNGL--- 157 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTT-----------CCEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTSC---
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCC-----------CcEeEeeecCCCCCEEEEEEC-CCCCEEEEECCCCe---
Confidence 355566665 4577888999999999998 566666655 78889999999 68888888887776
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| ++||+ .+++.. +. +| ...|.++ +| +++++++++.|+.++
T Consensus 158 -i-----------------~iwd~-------~~~~~~~~~~-----~~--~~~v~~~---~~--~~~~l~~~~~dg~i~- 199 (401)
T 4aez_A 158 -V-----------------DIYDV-------ESQTKLRTMA-----GH--QARVGCL---SW--NRHVLSSGSRSGAIH- 199 (401)
T ss_dssp -E-----------------EEEET-------TTCCEEEEEC-----CC--SSCEEEE---EE--ETTEEEEEETTSEEE-
T ss_pred -E-----------------EEEEC-------cCCeEEEEec-----CC--CCceEEE---EE--CCCEEEEEcCCCCEE-
Confidence 9 99999 776665 66 89 9999999 77 456777777777777
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL 334 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 334 (537)
+|++... ... ...+..|...|.+++|+|++++
T Consensus 200 -i~d~~~~-------------------------------------------~~~----~~~~~~~~~~v~~~~~~~~~~~ 231 (401)
T 4aez_A 200 -HHDVRIA-------------------------------------------NHQ----IGTLQGHSSEVCGLAWRSDGLQ 231 (401)
T ss_dssp -EEETTSS-------------------------------------------SCE----EEEEECCSSCEEEEEECTTSSE
T ss_pred -EEecccC-------------------------------------------cce----eeEEcCCCCCeeEEEEcCCCCE
Confidence 7776541 111 2234578899999999999999
Q ss_pred EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942 335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414 (537)
Q Consensus 335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 414 (537)
|++++.|+.|++||+. ....+..+..|.. .
T Consensus 232 l~s~~~d~~v~iwd~~-~~~~~~~~~~~~~-------------------------------------------------~ 261 (401)
T 4aez_A 232 LASGGNDNVVQIWDAR-SSIPKFTKTNHNA-------------------------------------------------A 261 (401)
T ss_dssp EEEEETTSCEEEEETT-CSSEEEEECCCSS-------------------------------------------------C
T ss_pred EEEEeCCCeEEEccCC-CCCccEEecCCcc-------------------------------------------------e
Confidence 9999999999999998 4444444333332 7
Q ss_pred eeEEEEcCCC-CEEEEEe--CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeE
Q psy10942 415 VWFVNFSPLD-RILISSS--GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTCV 489 (537)
Q Consensus 415 i~~~~~s~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~ 489 (537)
+.+++|+|++ .++++++ .|+.|++||+.+++++..+. +...|.+++|+|++++|++++ .||.|++||+.+++..
T Consensus 262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE
T ss_pred EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce
Confidence 8888899976 5666655 69999999999999998887 667899999999999999954 8999999999987655
Q ss_pred EE--ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 490 ST--FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 490 ~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.. +.+|...| .++ +|+|++++|++++.||.|++|
T Consensus 341 ~~~~~~~h~~~v-----------~~~---~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 341 KQVDIPAHDTRV-----------LYS---ALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp EEEEEECCSSCC-----------CEE---EECTTSSEEEEECTTSEEEEE
T ss_pred eEEEecCCCCCE-----------EEE---EECCCCCEEEEEeCCCcEEEE
Confidence 44 67899999 899 999999999999999999998
No 91
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-34 Score=275.41 Aligned_cols=299 Identities=12% Similarity=0.081 Sum_probs=214.8
Q ss_pred ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce--ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEE
Q psy10942 45 YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV--KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNIS 121 (537)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~--~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~ 121 (537)
..++.++ .+.| +++++++++.|+.|++||+.++ +.+..+..| +.|.+++|+|++++|++++.|+.|+
T Consensus 11 ~~~v~~~--~~s~--------~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 11 PKPSYEH--AFNS--------QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp SSCCSCC--EECS--------SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred CCcEEEE--EECC--------CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 4567777 5688 6689999999999999999988 778888765 6999999999999999999999999
Q ss_pred EEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942 122 LYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI 201 (537)
Q Consensus 122 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~ 201 (537)
+||+.++. .......+.+|...|.+++|+ ++++.|++++.++. | ++||+
T Consensus 81 vwd~~~~~--------~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~----i-----------------~iwd~- 129 (377)
T 3dwl_C 81 VYEKRPDG--------TWKQTLVLLRLNRAATFVRWS-PNEDKFAVGSGARV----I-----------------SVCYF- 129 (377)
T ss_dssp EC--------------CCCCEEECCCCSSCEEEEECC-TTSSCCEEEESSSC----E-----------------EECCC-
T ss_pred EEEcCCCC--------ceeeeeEecccCCceEEEEEC-CCCCEEEEEecCCe----E-----------------EEEEE-
Confidence 99999831 012566778899999999999 68888888888777 9 99998
Q ss_pred HHhhhcccccc---c--cccccccc-CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccc
Q psy10942 202 LEAKFKQSSSQ---Q--KHNTERLG-RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE 275 (537)
Q Consensus 202 ~~~~~~~~~~~---~--l~~~~~~~-h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~ 275 (537)
...+. . +. + | ...|.++ +|+|++++|++++.|+.++ +|++......... ..
T Consensus 130 ------~~~~~~~~~~~~~-----~~h--~~~v~~~---~~~~~~~~l~~~~~d~~i~--iwd~~~~~~~~~~-----~~ 186 (377)
T 3dwl_C 130 ------EQENDWWVSKHLK-----RPL--RSTILSL---DWHPNNVLLAAGCADRKAY--VLSAYVRDVDAKP-----EA 186 (377)
T ss_dssp -----------CCCCEEEC-----SSC--CSCEEEE---EECTTSSEEEEEESSSCEE--EEEECCSSCC-CC-----CS
T ss_pred ------CCcccceeeeEee-----ccc--CCCeEEE---EEcCCCCEEEEEeCCCEEE--EEEEEecccCCCc-----cc
Confidence 66552 2 44 6 9 9999999 9999999999999999999 9999763211110 00
Q ss_pred eeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee
Q psy10942 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL 355 (537)
Q Consensus 276 ~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~ 355 (537)
..|.... ..... ...+ .|...|.+++|+|++++|++++.|+.|++||+.....+
T Consensus 187 ----------------------~~~~~~~--~~~~~-~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 187 ----------------------SVWGSRL--PFNTV-CAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp ----------------------CSSCSCC--CEEEE-EECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred ----------------------ccccccc--chhhh-hhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 0000000 00111 2233 78999999999999999999999999999999833221
Q ss_pred ---eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942 356 ---LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG 432 (537)
Q Consensus 356 ---~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (537)
+..+.. |.. .+.+++|+|++++|++++.
T Consensus 241 ~~~~~~~~~--------------------------------~~~-----------------~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 241 PRALITVKL--------------------------------SQL-----------------PLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp EEECCCEEC--------------------------------SSS-----------------CEEEEEEEETTEEEEEESS
T ss_pred ceeeEeecC--------------------------------CCC-----------------ceEEEEEcCCCCEEEEEcC
Confidence 223333 322 6778888888888888876
Q ss_pred CCcEEEEECCCce--ee----------------------------------eE----------------eecCCcceEEE
Q psy10942 433 DATIKLWCLTDYV--CL----------------------------------KS----------------LEGHDASVLRC 460 (537)
Q Consensus 433 dg~i~i~d~~~~~--~~----------------------------------~~----------------~~~~~~~v~~~ 460 (537)
++.+ +|+..... .. .. ...|.+.|+++
T Consensus 272 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~ 350 (377)
T 3dwl_C 272 YSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATL 350 (377)
T ss_dssp SSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEE
T ss_pred CcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEE
Confidence 6555 66554111 00 00 11389999999
Q ss_pred EEecC-CC---EEEEEeCCCcEEEEEC
Q psy10942 461 HFINK-GT---QIVSTGADGLLKLWSI 483 (537)
Q Consensus 461 ~~s~~-~~---~l~s~~~dg~v~vwd~ 483 (537)
++.+. +. .|+|++.||.|++||+
T Consensus 351 ~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 351 RPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred eccCCCCCceEEEEeecCCCcEEEecC
Confidence 97664 33 6999999999999985
No 92
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=279.75 Aligned_cols=319 Identities=12% Similarity=0.041 Sum_probs=238.7
Q ss_pred ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
+..|.+++|+ |||++++|++.|++|+ |.+.++.+. .+...+..+ .++| ++ .++.+.+
T Consensus 15 ~~~v~sv~~S--pDG~~iASas~D~TV~--d~~~~~~l~--gh~~~v~~V--~FsP--------dg-------~~~~~~~ 71 (588)
T 2j04_A 15 EDWKNNLTWA--RDGTLYLTTFPDISIG--QPKYAKDIN--CNSKNLFHV--KEFP--------LE-------FENKLDF 71 (588)
T ss_dssp SSSSCCEEEC--TTSCEEEECSSSEEEE--EECCCSCCS--SBGGGTEEE--EEEC--------CC-------CCCTTTT
T ss_pred hccEEEEEEC--CCCCEEEEEcCCceee--cccccceec--CCCccEEEE--EECC--------CC-------CcceEEE
Confidence 3468999999 8999999999999999 766665442 245556666 5588 33 3454555
Q ss_pred eeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh-----hhhhhh
Q psy10942 82 YETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD-----EILDIA 156 (537)
Q Consensus 82 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~ 156 (537)
|+.+. ..+..+.+.+.|.+++|||||++||+++.||.|++||.++ ++..+. |.. .+.+++
T Consensus 72 ~~~~~-~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-------------~l~~l~-~~~~~~~~sv~sva 136 (588)
T 2j04_A 72 ELAQQ-NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-------------MLTNLD-SKGNLSSRTYHCFE 136 (588)
T ss_dssp SCCCS-SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-------------EEEECC-CSSCSTTTCEEEEE
T ss_pred EeCCC-ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-------------eeeecc-CCCccccccEEEEE
Confidence 54332 2344444567899999999999999999999999999433 455556 554 489999
Q ss_pred cccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc--------c-ccccccccCCCcCe
Q psy10942 157 LLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ--------Q-KHNTERLGRDELKT 227 (537)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~--------~-l~~~~~~~h~~~~~ 227 (537)
|+ |++++|++++.++. | ++||+ ..+.. . ++ ....+| ...
T Consensus 137 fS-PDG~~LAsgs~DGt----V-----------------kIWd~-------~~~~l~~~~~i~l~ti~-~~~~gh--~~~ 184 (588)
T 2j04_A 137 WN-PIESSIVVGNEDGE----L-----------------QFFSI-------RKNSENTPEFYFESSIR-LSDAGS--KDW 184 (588)
T ss_dssp EC-SSSSCEEEEETTSE----E-----------------EEEEC-------CCCTTTCCCCEEEEEEE-CSCTTC--CCC
T ss_pred Ec-CCCCEEEEEcCCCE----E-----------------EEEEC-------CCCccccccceeeeeee-cccccc--ccc
Confidence 99 89999999998887 9 99999 66643 1 21 011378 899
Q ss_pred EEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCce
Q psy10942 228 VTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLK 307 (537)
Q Consensus 228 v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~ 307 (537)
|.++ +|+|+| +++++.|+.++ +|++..+... + .
T Consensus 185 V~sV---awSPdg--Laass~D~tVr--lWd~~~~~~~--------------------------------------~--~ 217 (588)
T 2j04_A 185 VTHI---VWYEDV--LVAALSNNSVF--SMTVSASSHQ--------------------------------------P--V 217 (588)
T ss_dssp EEEE---EEETTE--EEEEETTCCEE--EECCCSSSSC--------------------------------------C--C
T ss_pred EEEE---EEcCCc--EEEEeCCCeEE--EEECCCCccc--------------------------------------c--c
Confidence 9999 999999 78888899999 8888763100 0 0
Q ss_pred eeeeecccc-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942 308 LLNVLRGHK-KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST 386 (537)
Q Consensus 308 ~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 386 (537)
...+ .+|...|.+++|+ ++.|++++ ++.|++||+. +.+......+|..
T Consensus 218 -----~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~-~~~~~~~~~gh~~---------------------- 266 (588)
T 2j04_A 218 -----SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLK-NYSISSLKTGSLE---------------------- 266 (588)
T ss_dssp -----EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETT-TTEEEEEECSCCS----------------------
T ss_pred -----eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECC-CCeEEEEEcCCCc----------------------
Confidence 1112 3577889999999 68899887 6999999998 4443222223443
Q ss_pred eeeeeccCCcceEEEEEecCCCceEEeeeeEEEE--cCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942 387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNF--SPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464 (537)
Q Consensus 387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 464 (537)
.+..++| +|++..+++++.||+ ++|... .++++|
T Consensus 267 ---------------------------~V~~va~~~s~d~~~La~a~edG~-klw~~d----------------~~~~sp 302 (588)
T 2j04_A 267 ---------------------------NFHIIPLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTA 302 (588)
T ss_dssp ---------------------------CCCEEEETTCSSCEEEEECSSCEE-EEEESS----------------SEEEEC
T ss_pred ---------------------------eEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECC
Confidence 7888999 999999999999999 999876 266999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
|+..+++. |+++++|+...+. +..+++ ...| .++ +|||||+.+|+++.
T Consensus 303 d~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I-----------~~v---a~SPdG~~lA~~~~ 350 (588)
T 2j04_A 303 DNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVI-----------HGI---SLSPDGYSIAIVYD 350 (588)
T ss_dssp CCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEE-----------EEE---EECTTSSEEEEEEE
T ss_pred CceEEEEc--CCEEEEEECCCCc-eeeecc-ceEE-----------EEE---EECCCCCEEEEEEe
Confidence 99888875 9999999975444 445544 6677 888 99999999998864
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.6e-33 Score=263.29 Aligned_cols=283 Identities=13% Similarity=0.120 Sum_probs=225.5
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCc-cEEEeeeccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDS-HIVVASNEYL 173 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~~~~ 173 (537)
+.+.|.+++|+|++++|++++.|+.|++||+.++.. ......+.+|...|.+++|+ ++++ ++++++.++.
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~--------~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK--------NVDLLQSLRYKHPLLCCNFI-DNTDLQIYVGTVQGE 80 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT--------EEEEEEEEECSSCEEEEEEE-ESSSEEEEEEETTSC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc--------cccceeeeecCCceEEEEEC-CCCCcEEEEEcCCCe
Confidence 346899999999999999999999999999988311 12345666899999999999 6778 8888887766
Q ss_pred cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc-c-cccccccc--CCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942 174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-Q-KHNTERLG--RDELKTVTLLERGKTVKEEDLFPRQSME 249 (537)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-~-l~~~~~~~--h~~~~~v~~~~~~~~s~~~~~l~~~~~d 249 (537)
| ++||+ ..... . +. + | ...|.++ +|+| ++++++++.|
T Consensus 81 ----i-----------------~~wd~-------~~~~~~~~~~-----~~~~--~~~v~~l---~~~~-~~~l~s~~~d 121 (342)
T 1yfq_A 81 ----I-----------------LKVDL-------IGSPSFQALT-----NNEA--NLGICRI---CKYG-DDKLIAASWD 121 (342)
T ss_dssp ----E-----------------EEECS-------SSSSSEEECB-----SCCC--CSCEEEE---EEET-TTEEEEEETT
T ss_pred ----E-----------------EEEEe-------ccCCceEecc-----ccCC--CCceEEE---EeCC-CCEEEEEcCC
Confidence 9 99986 22222 2 55 7 9 9999999 9999 9999999999
Q ss_pred CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942 250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS 329 (537)
Q Consensus 250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 329 (537)
+.++ +|++...... .+.. . .+. ...+. |...|.+++|+
T Consensus 122 ~~i~--iwd~~~~~~~------------------------------~~~~-~---~~~-----~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 122 GLIE--VIDPRNYGDG------------------------------VIAV-K---NLN-----SNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp SEEE--EECHHHHTTB------------------------------CEEE-E---ESC-----SSSSS-SCCCEEEEEEC
T ss_pred CeEE--EEcccccccc------------------------------cccc-c---CCe-----eeEEe-eCCceEEEEec
Confidence 9999 9998752100 0000 0 000 11222 77889999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccC-CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942 330 PNDKLLASGSLDKTVKVWSTTG-GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN 408 (537)
Q Consensus 330 ~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 408 (537)
|++ +++++.|+.|++||++. .......... .+..
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------------------~~~~------------ 194 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEES-------------------------------GLKY------------ 194 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEEC-------------------------------SCSS------------
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeec-------------------------------CCCC------------
Confidence 887 89999999999999984 2221111111 1111
Q ss_pred ceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCc------eeeeEeecCCc---------ceEEEEEecCCCEEEEE
Q psy10942 409 QIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDY------VCLKSLEGHDA---------SVLRCHFINKGTQIVST 472 (537)
Q Consensus 409 ~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~ 472 (537)
.+.+++|+| +++++++++.||.|++|++... +....+..|.. .|.+++|+|++++|+++
T Consensus 195 -----~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 195 -----QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp -----CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred -----ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 788899999 9999999999999999999886 77888888865 99999999999999999
Q ss_pred eCCCcEEEEECCCCeeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942 473 GADGLLKLWSIKTSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ 533 (537)
Q Consensus 473 ~~dg~v~vwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~ 533 (537)
+.||.|++||+.+++.+..+.+| ...| .++ + |++++|++++.||.
T Consensus 270 ~~dg~i~vwd~~~~~~~~~~~~~h~~~v-----------~~~---~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 270 GSDGIISCWNLQTRKKIKNFAKFNEDSV-----------VKI---A--CSDNILCLATSDDT 315 (342)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSSSEE-----------EEE---E--ECSSEEEEEEECTH
T ss_pred cCCceEEEEcCccHhHhhhhhcccCCCc-----------eEe---c--CCCCeEEEEecCCc
Confidence 99999999999999999999998 9999 888 7 99999999999997
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.6e-34 Score=262.63 Aligned_cols=263 Identities=14% Similarity=0.184 Sum_probs=198.7
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYL 173 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~ 173 (537)
+.+.|.+++|+|+|++||+++.|++|++||+.++. ...+..+.+|.+.|.+++|+++ +++.|++++.++.
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~---------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG---------QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE---------EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC---------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 34789999999999999999999999999998720 2356789999999999999854 4788888888777
Q ss_pred cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc--c--ccccccccCCCcCeEEEEeccCcccC--CCeeeecc
Q psy10942 174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ--Q--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQS 247 (537)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~--~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~ 247 (537)
| ++||+ +++.. . +. +| ...|.++ +|+|+ +.+|++++
T Consensus 83 ----v-----------------~iWd~-------~~~~~~~~~~~~-----~h--~~~V~~v---~~~p~~~g~~lasgs 124 (316)
T 3bg1_A 83 ----V-----------------IIWRE-------ENGTWEKSHEHA-----GH--DSSVNSV---CWAPHDYGLILACGS 124 (316)
T ss_dssp ----E-----------------EEECC-------SSSCCCEEEEEC-----CC--SSCCCEE---EECCTTTCSCEEEEC
T ss_pred ----E-----------------EEEEC-------CCCcceEEEEcc-----CC--CCceEEE---EECCCCCCcEEEEEc
Confidence 9 99999 66532 2 55 89 9999999 99998 78899999
Q ss_pred CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEE
Q psy10942 248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVT 327 (537)
Q Consensus 248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 327 (537)
.|+.++ +|++.... . |+. ...+..|...|.+++
T Consensus 125 ~D~~i~--lwd~~~~~--------------------------------~---~~~----------~~~~~~h~~~v~~~~ 157 (316)
T 3bg1_A 125 SDGAIS--LLTYTGEG--------------------------------Q---WEV----------KKINNAHTIGCNAVS 157 (316)
T ss_dssp SSSCEE--EEEECSSS--------------------------------C---EEE----------CCBTTSSSSCBCCCE
T ss_pred CCCCEE--EEecCCCC--------------------------------C---cce----------eeeeccccCCcceEE
Confidence 999999 88876521 0 000 223456788899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC---eeeeeeccCCcceEEEEEe
Q psy10942 328 VSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS---TCVSTFDKHALKIWTLAIT 404 (537)
Q Consensus 328 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~ 404 (537)
|+|+... +.+ .+.. .. .....+.++++++.|++|++||++.. +.+..+.+|..
T Consensus 158 ~~~~~~~-------~~~--~~~~-~~------~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~-------- 213 (316)
T 3bg1_A 158 WAPAVVP-------GSL--IDHP-SG------QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD-------- 213 (316)
T ss_dssp ECCCCCC---------------C-CS------CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS--------
T ss_pred EccccCC-------ccc--cccc-cc------cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC--------
Confidence 9997420 000 0000 00 00122467888888888888888654 45566777776
Q ss_pred cCCCceEEeeeeEEEEcCCC----CEEEEEeCCCcEEEEECCCc---e-eeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942 405 KDENQIITGGVWFVNFSPLD----RILISSSGDATIKLWCLTDY---V-CLKSLEGHDASVLRCHFINKGTQIVSTGADG 476 (537)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i~d~~~~---~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 476 (537)
.|.+++|+|++ ++|++++.|++|++|++.+. + ....+..|...|.+++|+|++++||+++.|+
T Consensus 214 ---------~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 214 ---------WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp ---------CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred ---------ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 66777777775 79999999999999998762 1 2345567899999999999999999999999
Q ss_pred cEEEEECC
Q psy10942 477 LLKLWSIK 484 (537)
Q Consensus 477 ~v~vwd~~ 484 (537)
.|++|+..
T Consensus 285 ~v~lw~~~ 292 (316)
T 3bg1_A 285 KVTLWKES 292 (316)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEEC
Confidence 99999975
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.6e-33 Score=256.94 Aligned_cols=275 Identities=18% Similarity=0.247 Sum_probs=213.9
Q ss_pred eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee--cchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 99 LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 99 v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
...|+||+++ +||+| .|++|+|||+.+ +++++.+. +|...|.+++|+ ++++++++++.++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~t-----------g~~~~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~--- 90 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASS-----------GDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAE--- 90 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTT-----------CCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSE---
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCC-----------CCEEEEEEecCCCCeEEEEEEC-CCCCEEEEEECCCc---
Confidence 4678999987 77765 589999999999 66666654 577789999999 78889998888877
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| ++||+ +++++. +. +| ...+.++ ++++..+++++.++.++
T Consensus 91 -v-----------------~iw~~-------~~~~~~~~~~-----~h--~~~~~~~-----~~~~~~l~s~~~~~~~~- 132 (318)
T 4ggc_A 91 -V-----------------QLWDV-------QQQKRLRNMT-----SH--SARVGSL-----SWNSYILSSGSRSGHIH- 132 (318)
T ss_dssp -E-----------------EEEET-------TTTEEEEEEE-----CC--SSCEEEE-----EEETTEEEEEETTSEEE-
T ss_pred -E-----------------EEeec-------CCceeEEEec-----Cc--cceEEEe-----ecCCCEEEEEecCCceE-
Confidence 9 99999 877776 66 88 7777666 44556777777777666
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL 334 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 334 (537)
+|+... .... ...+.+|...+..+.+++++++
T Consensus 133 -~~~~~~-------------------------------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
T 4ggc_A 133 -HHDVRV-------------------------------------------AEHH----VATLSGHSQEVCGLRWAPDGRH 164 (318)
T ss_dssp -EEETTS-------------------------------------------SSCE----EEEEECCSSCEEEEEECTTSSE
T ss_pred -eeecCC-------------------------------------------Ccee----EEEEcCccCceEEEEEcCCCCE
Confidence 665544 2111 2234578888999999999999
Q ss_pred EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942 335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414 (537)
Q Consensus 335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 414 (537)
|++++.|+.|++||+....... ........+.. .
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~-----------------------------~~~~~~~~~~~-----------------~ 198 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGW-----------------------------VPLQTFTQHQG-----------------A 198 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBS-----------------------------CCSEEECCCCS-----------------C
T ss_pred EEEEecCcceeEEECCCCcccc-----------------------------cceeeecccCC-----------------c
Confidence 9999999999999998321110 01111122222 5
Q ss_pred eeEEEEcCCCCE---EEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeE
Q psy10942 415 VWFVNFSPLDRI---LISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG--ADGLLKLWSIKTSTCV 489 (537)
Q Consensus 415 i~~~~~s~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~ 489 (537)
+.+++++|++.. +++++.++.|++||........... +...+..+.|+|+++.+++++ .|+.|++||+++++++
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence 566666666542 3456778999999999887766655 677899999999999888765 7999999999999999
Q ss_pred EEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 490 STFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 490 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
..+.+|...| +++ +|+|||++|+|++.||+|+||
T Consensus 278 ~~l~gH~~~V-----------~~l---~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 278 AELKGHTSRV-----------LSL---TMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp EEECCCSSCE-----------EEE---EECTTSSCEEEEETTTEEEEE
T ss_pred EEEcCCCCCE-----------EEE---EEcCCCCEEEEEecCCeEEEE
Confidence 9999999999 999 999999999999999999999
No 96
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=268.25 Aligned_cols=267 Identities=10% Similarity=0.054 Sum_probs=202.9
Q ss_pred CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942 96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG 175 (537)
Q Consensus 96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~ 175 (537)
..+|.+++|||||+++|+++.|++|+ |... . +.+.+|...|.+++|+ |++ .++.
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~-----------~---~~l~gh~~~v~~V~Fs-Pdg-------~~~~-- 68 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKY-----------A---KDINCNSKNLFHVKEF-PLE-------FENK-- 68 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECC-----------C---SCCSSBGGGTEEEEEE-CCC-------CCCT--
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccc-----------c---ceecCCCccEEEEEEC-CCC-------Ccce--
Confidence 36899999999999999999999999 6444 2 3447999999999999 555 1222
Q ss_pred CcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942 176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE 255 (537)
Q Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~ 255 (537)
+ .+|+. +.....-. .| ...|.++ +|||+|++||+++.||.++
T Consensus 69 --~-----------------~~~~~-------~~~~~~~~-----~~--~~~V~~v---awSPdG~~LAs~s~dg~V~-- 110 (588)
T 2j04_A 69 --L-----------------DFELA-------QQNGLLNS-----QP--VCYPRVC---KPSPIDDWMAVLSNNGNVS-- 110 (588)
T ss_dssp --T-----------------TTSCC-------CSSCSSTT-----SC--SCCEEEE---EECSSSSCEEEEETTSCEE--
T ss_pred --E-----------------EEEeC-------CCceEeec-----CC--CCcEEEE---EECCCCCEEEEEeCCCcEE--
Confidence 4 44443 22222222 56 7889999 9999999999999999999
Q ss_pred cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942 256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL 335 (537)
Q Consensus 256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 335 (537)
+|+... .+...+ ... .-....+.+++|||||++|
T Consensus 111 iwd~~~----------------------------------~l~~l~-~~~-----------~~~~~sv~svafSPDG~~L 144 (588)
T 2j04_A 111 VFKDNK----------------------------------MLTNLD-SKG-----------NLSSRTYHCFEWNPIESSI 144 (588)
T ss_dssp EEETTE----------------------------------EEEECC-CSS-----------CSTTTCEEEEEECSSSSCE
T ss_pred EEeCCc----------------------------------eeeecc-CCC-----------ccccccEEEEEEcCCCCEE
Confidence 998432 011101 000 0012358999999999999
Q ss_pred EEEeCCCcEEEEEccCCce------eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942 336 ASGSLDKTVKVWSTTGGLK------LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409 (537)
Q Consensus 336 ~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 409 (537)
++|+.||+|++||+..+.. .+..+..+.. +|..
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~----------------------------gh~~------------- 183 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA----------------------------GSKD------------- 183 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT----------------------------TCCC-------------
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccc----------------------------cccc-------------
Confidence 9999999999999983211 2344433221 2222
Q ss_pred eEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee---eeEee-cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 410 IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC---LKSLE-GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
.|.+++|+||| +++++.|+.|++||+..++. ..+++ +|...|.+++|+ ++.||+++ ++.|++||+.+
T Consensus 184 ----~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~ 254 (588)
T 2j04_A 184 ----WVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN 254 (588)
T ss_dssp ----CEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT
T ss_pred ----cEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC
Confidence 78899999999 88889999999999988763 35664 788899999999 58999997 69999999988
Q ss_pred CeeEEEecCCccceeccCCCCCCccccccceee--ecCCCEEEEEeCCCCEEeC
Q psy10942 486 STCVSTFDKHALKIRNSDSENDHKGFGLPRQLC--SRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 486 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--s~~~~~l~s~~~dg~i~vW 537 (537)
++......+|...+ .++ +| +||+..|++++.||+ ++|
T Consensus 255 ~~~~~~~~gh~~~V-----------~~v---a~~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 255 YSISSLKTGSLENF-----------HII---PLNHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp TEEEEEECSCCSCC-----------CEE---EETTCSSCEEEEECSSCEE-EEE
T ss_pred CeEEEEEcCCCceE-----------EEE---EeeeCCCCCEEEEEcCCCC-EEE
Confidence 88754444899999 999 99 999999999999999 887
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.4e-33 Score=263.87 Aligned_cols=291 Identities=10% Similarity=0.057 Sum_probs=225.9
Q ss_pred eeccceehhhhcCCC-cceEEEEEecc---ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc
Q psy10942 82 YETSAVKELYQHGLS-SPLVRIVRSSV---KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL 157 (537)
Q Consensus 82 wd~~~~~~~~~~~~~-~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (537)
|+....+.+..+..| +.|.+++|+|+ |++|++++.|+.|++||+.+.. ......+.+|...|.+++|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~h~~~v~~~~~ 94 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---------QTIPKAQQMHTGPVLDVCW 94 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS---------CEEEEEEEECSSCEEEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC---------ceeEEEeccccCCEEEEEE
Confidence 444555566666655 79999999999 6999999999999999998620 3444788999999999999
Q ss_pred ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCc
Q psy10942 158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKT 236 (537)
Q Consensus 158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~ 236 (537)
+ +++++|++++.++. | ++||+ .+.+.. +. +| ...|.++ +|
T Consensus 95 ~-~~~~~l~s~~~dg~----v-----------------~iwd~-------~~~~~~~~~-----~~--~~~v~~~---~~ 135 (368)
T 3mmy_A 95 S-DDGSKVFTASCDKT----A-----------------KMWDL-------SSNQAIQIA-----QH--DAPVKTI---HW 135 (368)
T ss_dssp C-TTSSEEEEEETTSE----E-----------------EEEET-------TTTEEEEEE-----EC--SSCEEEE---EE
T ss_pred C-cCCCEEEEEcCCCc----E-----------------EEEEc-------CCCCceeec-----cc--cCceEEE---EE
Confidence 9 68888888887777 9 99999 777766 66 89 9999999 99
Q ss_pred --ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942 237 --VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG 314 (537)
Q Consensus 237 --s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 314 (537)
+|++++|++++.|+.++ +|++..+.. +..
T Consensus 136 ~~~~~~~~l~~~~~dg~i~--vwd~~~~~~--------------------------------~~~--------------- 166 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWDKTLK--FWDTRSSNP--------------------------------MMV--------------- 166 (368)
T ss_dssp EECSSCEEEEEEETTSEEE--EECSSCSSC--------------------------------SEE---------------
T ss_pred EeCCCCCEEEEccCCCcEE--EEECCCCcE--------------------------------EEE---------------
Confidence 88998899998888888 888776310 001
Q ss_pred cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 394 (537)
Q Consensus 315 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 394 (537)
+..+ ..+.++.+.+ ..+++++.++.+++|++............. .
T Consensus 167 -~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------------------------------~ 211 (368)
T 3mmy_A 167 -LQLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESP-------------------------------L 211 (368)
T ss_dssp -EECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCS-------------------------------C
T ss_pred -EecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhcccc-------------------------------c
Confidence 1111 2355555553 478888889999999998433322221111 0
Q ss_pred CcceEEEEEecCCCceEEeeeeEEEEcCCCC----EEEEEeCCCcEEEEECCCc---eeeeEeecCCc------------
Q psy10942 395 ALKIWTLAITKDENQIITGGVWFVNFSPLDR----ILISSSGDATIKLWCLTDY---VCLKSLEGHDA------------ 455 (537)
Q Consensus 395 ~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~----~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~------------ 455 (537)
.. ...++++.++.. .+++++.||.|++||+... +.+..+.+|..
T Consensus 212 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
T 3mmy_A 212 KH-----------------QHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIY 274 (368)
T ss_dssp SS-----------------CEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEEC
T ss_pred cC-----------------CCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccccccc
Confidence 01 223333333332 3999999999999999886 56778888876
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV 535 (537)
Q Consensus 456 ~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~ 535 (537)
.|++++|+|++++|++++.||.|++||+.+++++..+.+|...| .++ +|+|++++|++++.|+..+
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----------~~~---~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPI-----------SAC---CFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCE-----------EEE---EECTTSSCEEEEECCCSTT
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCc-----------eEE---EECCCCCeEEEEecccccc
Confidence 79999999999999999999999999999999999999999999 999 9999999999999987644
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-33 Score=262.17 Aligned_cols=256 Identities=17% Similarity=0.124 Sum_probs=185.6
Q ss_pred cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC--Cc--------ceEEEE
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG--GT--------VELLAS 290 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------v~~l~~ 290 (537)
+| .+.|.++ +|+|+|++|++++.|++++ +|++..+... + ...+.+|.. .+ -..|++
T Consensus 11 ~H--~~~V~~v---~~s~~g~~lasgs~D~~v~--lwd~~~~~~~--~-----~~~l~gH~~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 11 SH--EDMIHDA---QMDYYGTRLATCSSDRSVK--IFDVRNGGQI--L-----IADLRGHEGPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp -----CCEEEE---EECGGGCEEEEEETTTEEE--EEEEETTEEE--E-----EEEEECCSSCEEEEEECCGGGSSCEEE
T ss_pred cc--cCeEEEe---eEcCCCCEEEEEeCCCeEE--EEEecCCCcE--E-----EEEEcCCCccEEEEEeCCCCCCCEEEE
Confidence 99 9999999 9999999999999999999 9999864211 1 223334432 11 157999
Q ss_pred EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE
Q psy10942 291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI 368 (537)
Q Consensus 291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l 368 (537)
++.|++|++||++++.... ...+.+|...|.+++|+|+ +.+|++++.|+.|++||+......
T Consensus 77 ~s~D~~v~iWd~~~~~~~~---~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~------------- 140 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEK---SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW------------- 140 (316)
T ss_dssp EETTSCEEEECCSSSCCCE---EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE-------------
T ss_pred EECCCEEEEEECCCCcceE---EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc-------------
Confidence 9999999999998764211 2345689999999999998 789999999999999998832110
Q ss_pred EEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---e
Q psy10942 369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY---V 445 (537)
Q Consensus 369 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---~ 445 (537)
.....+..|...+.++.++|+...-.......-...+++++|++|+.|+.|++||+... +
T Consensus 141 -----------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 141 -----------------EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp -----------------EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred -----------------ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence 01122334555444445544421000000000000112578999999999999999754 5
Q ss_pred eeeEeecCCcceEEEEEecCC----CEEEEEeCCCcEEEEECCCC---e-eEEEecCCccceeccCCCCCCcccccccee
Q psy10942 446 CLKSLEGHDASVLRCHFINKG----TQIVSTGADGLLKLWSIKTS---T-CVSTFDKHALKIRNSDSENDHKGFGLPRQL 517 (537)
Q Consensus 446 ~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~v~vwd~~~~---~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 517 (537)
++..+.+|...|.+++|+|++ ++|++++.|++|++|++++. + ....+..|...| .++ +
T Consensus 204 ~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v-----------~~v---~ 269 (316)
T 3bg1_A 204 EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVV-----------WHV---S 269 (316)
T ss_dssp EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCE-----------EEE---E
T ss_pred eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcE-----------EEE---E
Confidence 677889999999999999986 89999999999999998762 1 223456678888 899 9
Q ss_pred eecCCCEEEEEeCCCCEEeC
Q psy10942 518 CSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 518 ~s~~~~~l~s~~~dg~i~vW 537 (537)
|+|++++|++++.||.|+||
T Consensus 270 ~sp~g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 270 WSITANILAVSGGDNKVTLW 289 (316)
T ss_dssp ECTTTCCEEEEESSSCEEEE
T ss_pred EcCCCCEEEEEcCCCeEEEE
Confidence 99999999999999999998
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-32 Score=265.64 Aligned_cols=266 Identities=23% Similarity=0.408 Sum_probs=223.1
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
..|.+++| ++++|++|+.|+.|++||+.+ ++....+.+|...|.+++|. ++.+++++.++.
T Consensus 134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~-----------~~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~--- 194 (435)
T 1p22_A 134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNT-----------LECKRILTGHTGSVLCLQYD---ERVIITGSSDST--- 194 (435)
T ss_dssp CCEEEEEC--CSSEEEEEESSSCEEEEESSS-----------CCEEEEECCCSSCEEEEECC---SSEEEEEETTSC---
T ss_pred CcEEEEEE--CCCEEEEEeCCCeEEEEeCCC-----------CeEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCe---
Confidence 46777766 899999999999999999998 78889999999999999984 678888887777
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| ++||+ .+++.. +. +| ...|.++ +|++ .++++++.|+.++
T Consensus 195 -i-----------------~vwd~-------~~~~~~~~~~-----~h--~~~v~~l---~~~~--~~l~s~s~dg~i~- 236 (435)
T 1p22_A 195 -V-----------------RVWDV-------NTGEMLNTLI-----HH--CEAVLHL---RFNN--GMMVTCSKDRSIA- 236 (435)
T ss_dssp -E-----------------EEEES-------SSCCEEEEEC-----CC--CSCEEEE---ECCT--TEEEEEETTSCEE-
T ss_pred -E-----------------EEEEC-------CCCcEEEEEc-----CC--CCcEEEE---EEcC--CEEEEeeCCCcEE-
Confidence 9 99999 877766 66 89 9999999 8864 4888888888888
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL 334 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 334 (537)
+|++.... ... . ...+.+|...|.+++| ++++
T Consensus 237 -vwd~~~~~-------------------------------------------~~~-~-~~~~~~~~~~v~~~~~--~~~~ 268 (435)
T 1p22_A 237 -VWDMASPT-------------------------------------------DIT-L-RRVLVGHRAAVNVVDF--DDKY 268 (435)
T ss_dssp -EEECSSSS-------------------------------------------CCE-E-EEEECCCSSCEEEEEE--ETTE
T ss_pred -EEeCCCCC-------------------------------------------Cce-e-eeEecCCCCcEEEEEe--CCCE
Confidence 88776631 000 0 1234578889999999 6789
Q ss_pred EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942 335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414 (537)
Q Consensus 335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 414 (537)
+++++.||.|++||+. ..+.+..+..|.. .
T Consensus 269 l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~-------------------------------------------------~ 298 (435)
T 1p22_A 269 IVSASGDRTIKVWNTS-TCEFVRTLNGHKR-------------------------------------------------G 298 (435)
T ss_dssp EEEEETTSEEEEEETT-TCCEEEEEECCSS-------------------------------------------------C
T ss_pred EEEEeCCCeEEEEECC-cCcEEEEEcCCCC-------------------------------------------------c
Confidence 9999999999999988 5555555554433 5
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe-------
Q psy10942 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST------- 487 (537)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~------- 487 (537)
+.++++ +++++++|+.||.|++||+.+++++..+.+|...|.+++| ++.+|++++.||.|++||+.+++
T Consensus 299 v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 374 (435)
T 1p22_A 299 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAG 374 (435)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTT
T ss_pred EEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccccc
Confidence 666666 4679999999999999999999999999999999999999 78899999999999999997766
Q ss_pred --eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 488 --CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 488 --~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
++..+.+|...| .++ +| ++++|++++.||.|++|
T Consensus 375 ~~~~~~~~~h~~~v-----------~~l---~~--~~~~l~s~s~Dg~i~iw 410 (435)
T 1p22_A 375 TLCLRTLVEHSGRV-----------FRL---QF--DEFQIVSSSHDDTILIW 410 (435)
T ss_dssp TTEEEEECCCSSCC-----------CCE---EE--CSSCEEECCSSSEEEEE
T ss_pred chheeeccCCCCCe-----------EEE---Ee--CCCEEEEEeCCCEEEEE
Confidence 788999999999 888 88 88999999999999998
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=266.90 Aligned_cols=328 Identities=12% Similarity=0.109 Sum_probs=225.4
Q ss_pred eeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee-----------hhhhcCCC-------------
Q psy10942 41 SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK-----------ELYQHGLS------------- 96 (537)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~-----------~~~~~~~~------------- 96 (537)
.+...+.+.++ .+.| ++.+|++++.||.|++||+.+++ .+..+..|
T Consensus 24 ~~~~~~~V~~v--~~s~--------~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 93 (447)
T 3dw8_B 24 DVAEADIISTV--EFNH--------SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIE 93 (447)
T ss_dssp CCCGGGSEEEE--EECS--------SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEEC
T ss_pred cccccCcEEEE--EECC--------CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccccc
Confidence 34456777777 5688 67899999999999999999876 35555555
Q ss_pred cceEEEEEeccc--cEEEEEeCCceEEEEecccccCcccc--------------cc--------------cccceeEE-e
Q psy10942 97 SPLVRIVRSSVK--RMYAVVTADHNISLYRLNSETGLEER--------------PN--------------KILKFRKQ-F 145 (537)
Q Consensus 97 ~~v~~~~~s~~~--~~la~~~~d~~i~iwd~~~~~~~~~~--------------~~--------------~~~~~~~~-~ 145 (537)
+.|.+++|+|++ .+|++++.|+.|++||+.++...... .. ......+. .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 679999999998 78999999999999999873210000 00 00001112 3
Q ss_pred ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-----ccccccc
Q psy10942 146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-----KHNTERL 220 (537)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-----l~~~~~~ 220 (537)
.+|...|.+++|+ ++++.++++ .++. | ++||+ ...... +....+.
T Consensus 174 ~~h~~~v~~~~~~-~~~~~l~s~-~d~~----i-----------------~iwd~-------~~~~~~~~~~~~~~~~~~ 223 (447)
T 3dw8_B 174 NAHTYHINSISIN-SDYETYLSA-DDLR----I-----------------NLWHL-------EITDRSFNIVDIKPANME 223 (447)
T ss_dssp SCCSSCCCEEEEC-TTSSEEEEE-CSSE----E-----------------EEEET-------TEEEEEEEEEECCCSSGG
T ss_pred cCCCcceEEEEEc-CCCCEEEEe-CCCe----E-----------------EEEEC-------CCCCceeeeeeccccccc
Confidence 6799999999999 678888776 5555 9 99999 532221 1112344
Q ss_pred cCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942 221 GRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV 299 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i 299 (537)
+| ...|.++ +|+|++ ++|++++.|+.|+ +|++..+..... .+..
T Consensus 224 ~~--~~~v~~~---~~~p~~~~~l~s~~~dg~i~--iwd~~~~~~~~~----------------------------~~~~ 268 (447)
T 3dw8_B 224 EL--TEVITAA---EFHPNSCNTFVYSSSKGTIR--LCDMRASALCDR----------------------------HSKL 268 (447)
T ss_dssp GC--CCCEEEE---EECSSCTTEEEEEETTSCEE--EEETTTCSSSCT----------------------------TCEE
T ss_pred cc--CcceEEE---EECCCCCcEEEEEeCCCeEE--EEECcCCccccc----------------------------eeeE
Confidence 89 9999999 999998 9999999999999 999987431100 0112
Q ss_pred EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEE
Q psy10942 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKL 379 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 379 (537)
+........ ...+..|...|.+++|+|++++|++++. +.|++||++...+++..+..|..-
T Consensus 269 ~~~~~~~~~----~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~-------------- 329 (447)
T 3dw8_B 269 FEEPEDPSN----RSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL-------------- 329 (447)
T ss_dssp ECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG--------------
T ss_pred eccCCCccc----cccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccc--------------
Confidence 221111000 2234567789999999999999999998 999999998435555555444210
Q ss_pred EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec-------
Q psy10942 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG------- 452 (537)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------- 452 (537)
.. .....+.. ..+ ..+..++|+|++++|++|+.||.|++||+.+++.+. +..
T Consensus 330 ---~~-~l~~~~~~--~~i--------------~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~ 388 (447)
T 3dw8_B 330 ---RS-KLCSLYEN--DCI--------------FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP 388 (447)
T ss_dssp ---TT-THHHHHHT--SGG--------------GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred ---cc-cccccccc--ccc--------------ccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence 00 00000000 000 023458999999999999999999999999877653 222
Q ss_pred --------------------------CCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 453 --------------------------HDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 453 --------------------------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
+...|..++|+|++++||+++.++ +++|..+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 235688999999999999998876 8888743
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-31 Score=251.94 Aligned_cols=266 Identities=17% Similarity=0.202 Sum_probs=200.0
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccEEEeeeccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHIVVASNEYL 173 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~~~~ 173 (537)
+.+.|.+++|+|++++||+++.|+.|++||+.++.. ..+....+.+|...|.+++|+|. ++.+|++++.++.
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-------NWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSC-------CEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC-------cceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 336899999999999999999999999999987311 12567788899999999999954 5788888887777
Q ss_pred cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc---------cc--ccccccccCCCcCeEEEEeccCcccC--C
Q psy10942 174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS---------QQ--KHNTERLGRDELKTVTLLERGKTVKE--E 240 (537)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~---------~~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~ 240 (537)
| ++||+ ..+. .. +. +| ...|.++ +|+|+ +
T Consensus 83 ----v-----------------~vwd~-------~~~~~~~~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~~ 124 (351)
T 3f3f_A 83 ----V-----------------KLWEE-------DPDQEECSGRRWNKLCTLN-----DS--KGSLYSV---KFAPAHLG 124 (351)
T ss_dssp ----E-----------------EEEEE-------CTTSCTTSSCSEEEEEEEC-----CC--SSCEEEE---EECCGGGC
T ss_pred ----E-----------------EEEec-------CCCcccccccCcceeeeec-----cc--CCceeEE---EEcCCCCC
Confidence 9 99998 6542 12 45 89 9999999 99999 9
Q ss_pred CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccC
Q psy10942 241 DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE 320 (537)
Q Consensus 241 ~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 320 (537)
++|++++.|+.++ +|++........ +.... .+. ........|.
T Consensus 125 ~~l~~~~~dg~v~--iwd~~~~~~~~~---------~~~~~--------------~~~------------~~~~~~~~~~ 167 (351)
T 3f3f_A 125 LKLACLGNDGILR--LYDALEPSDLRS---------WTLTS--------------EMK------------VLSIPPANHL 167 (351)
T ss_dssp SEEEEEETTCEEE--EEECSSTTCTTC---------CEEEE--------------EEE------------SCSCCCSSCS
T ss_pred cEEEEecCCCcEE--EecCCChHHhcc---------ccccc--------------ccc------------ccccccCCcc
Confidence 9999999999999 999987432111 10000 000 0012234677
Q ss_pred CCeEEEEEcCC---CCEEEEEeCCCcEEEEEccCCcee--eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942 321 KDINCVTVSPN---DKLLASGSLDKTVKVWSTTGGLKL--LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395 (537)
Q Consensus 321 ~~v~~~~~s~~---~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 395 (537)
..+.+++|+|+ +.++++++.|+.+.+|+.. .... +..+. .|.
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~--------------------------------~h~ 214 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK-DGKLHVAAKLP--------------------------------GHK 214 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTEEEEEEECT-TSCEEEEEECC--------------------------------CCC
T ss_pred cceeEEEeccCCCCCcEEEEecCCCcEEEEccC-CCceeeeeecC--------------------------------CCC
Confidence 88999999997 8999999999999777765 3222 22222 222
Q ss_pred cceEEEEEecCCCceEEeeeeEEEEcCCC----CEEEEEeCCCcEEEEECCC----------------------------
Q psy10942 396 LKIWTLAITKDENQIITGGVWFVNFSPLD----RILISSSGDATIKLWCLTD---------------------------- 443 (537)
Q Consensus 396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i~d~~~---------------------------- 443 (537)
. .|.+++|+|++ ++|++++.||.|++||+..
T Consensus 215 ~-----------------~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (351)
T 3f3f_A 215 S-----------------LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQ 277 (351)
T ss_dssp S-----------------CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------
T ss_pred c-----------------ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccc
Confidence 2 55666666665 5666777777777776654
Q ss_pred ------------------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942 444 ------------------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 444 ------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 492 (537)
.+.+..+.+|...|++++|+|++++|++++.||.|++|++.+++.+..+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 278 GRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp -------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred cccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 3778888999999999999999999999999999999999988655443
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.3e-32 Score=263.45 Aligned_cols=269 Identities=19% Similarity=0.348 Sum_probs=208.8
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
++.++++++.||.|++||+.+++.+..+..| +.|.+++| ++++|++|+.||.|++||+.+ ++.+..
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~-----------~~~~~~ 208 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT-----------GEMLNT 208 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS-----------CCEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC-----------CcEEEE
Confidence 5679999999999999999999998888866 68999988 788999999999999999999 688889
Q ss_pred eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCC
Q psy10942 145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDE 224 (537)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~ 224 (537)
+.+|...|.+++|+ ++.+++++.++. | ++||+ .+.........+.+|
T Consensus 209 ~~~h~~~v~~l~~~---~~~l~s~s~dg~----i-----------------~vwd~-------~~~~~~~~~~~~~~~-- 255 (435)
T 1p22_A 209 LIHHCEAVLHLRFN---NGMMVTCSKDRS----I-----------------AVWDM-------ASPTDITLRRVLVGH-- 255 (435)
T ss_dssp ECCCCSCEEEEECC---TTEEEEEETTSC----E-----------------EEEEC-------SSSSCCEEEEEECCC--
T ss_pred EcCCCCcEEEEEEc---CCEEEEeeCCCc----E-----------------EEEeC-------CCCCCceeeeEecCC--
Confidence 99999999999997 457788877766 9 99998 665543111222388
Q ss_pred cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG 304 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~ 304 (537)
...|.++ +| +++++++++.|+.++ +|++..
T Consensus 256 ~~~v~~~---~~--~~~~l~s~~~dg~i~--vwd~~~------------------------------------------- 285 (435)
T 1p22_A 256 RAAVNVV---DF--DDKYIVSASGDRTIK--VWNTST------------------------------------------- 285 (435)
T ss_dssp SSCEEEE---EE--ETTEEEEEETTSEEE--EEETTT-------------------------------------------
T ss_pred CCcEEEE---Ee--CCCEEEEEeCCCeEE--EEECCc-------------------------------------------
Confidence 8899999 66 666777766666666 666554
Q ss_pred CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC
Q psy10942 305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT 384 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 384 (537)
++. ...+..|...|.+++++ ++++++++.||.|++||++ ..+.+..+..|..
T Consensus 286 ~~~-----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~-------------------- 337 (435)
T 1p22_A 286 CEF-----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEE-------------------- 337 (435)
T ss_dssp CCE-----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETT-TCCEEEEECCCSS--------------------
T ss_pred CcE-----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECC-CCCEEEEEeCCcC--------------------
Confidence 322 22235678889999884 6789999999999999988 4444444444332
Q ss_pred CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce---------eeeEeecCCc
Q psy10942 385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV---------CLKSLEGHDA 455 (537)
Q Consensus 385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~ 455 (537)
.+.+++| ++++|++|+.||.|++||+.+++ ++..+.+|.+
T Consensus 338 -----------------------------~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~ 386 (435)
T 1p22_A 338 -----------------------------LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 386 (435)
T ss_dssp -----------------------------CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred -----------------------------cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence 6677777 67899999999999999998766 7888999999
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST 491 (537)
Q Consensus 456 ~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 491 (537)
.|.+++| ++++|++++.||.|++||+.+......
T Consensus 387 ~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 387 RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp CCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 9999999 778999999999999999987765443
No 103
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.5e-31 Score=247.15 Aligned_cols=248 Identities=17% Similarity=0.202 Sum_probs=199.2
Q ss_pred cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW 300 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~ 300 (537)
+| ...|.++ +|+|++++|++++.||.|+ +|++.......
T Consensus 9 gH--~~~v~~~---~~~~~~~~l~~~~~dg~i~--iw~~~~~~~~~---------------------------------- 47 (351)
T 3f3f_A 9 GH--DDLVHDV---VYDFYGRHVATCSSDQHIK--VFKLDKDTSNW---------------------------------- 47 (351)
T ss_dssp CC--SSCEEEE---EECSSSSEEEEEETTSEEE--EEEECSSSCCE----------------------------------
T ss_pred cc--ccceeEE---EEcCCCCEEEEeeCCCeEE--EEECCCCCCcc----------------------------------
Confidence 99 9999999 9999999999999999999 99887632110
Q ss_pred ECCCCceeeeeecccccccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCc--------ee----------eEEEE
Q psy10942 301 STTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGL--------KL----------LNVLR 360 (537)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~--------~~----------~~~~~ 360 (537)
.. ...+.+|...|.+++|+| ++++|++++.||.|++||+.... +. +..+.
T Consensus 48 ---------~~-~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 117 (351)
T 3f3f_A 48 ---------EL-SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVK 117 (351)
T ss_dssp ---------EE-EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEE
T ss_pred ---------ee-cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEE
Confidence 00 233457889999999999 69999999999999999997431 22 34445
Q ss_pred ecCC--CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCCCc
Q psy10942 361 GHKK--GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGDAT 435 (537)
Q Consensus 361 ~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~ 435 (537)
.+++ +.++++++.|+.|++||+++++.+..+.... .+..+.+.+.+. ...+.+++|+|+ +.++++++.++.
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~~l~~~~~~~~ 193 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS-EMKVLSIPPANH---LQSDFCLSWCPSRFSPEKLAVSALEQA 193 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE-EEESCSCCCSSC---SCCCEEEEECCCSSSCCEEEEEETTEE
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc-cccccccccCCc---ccceeEEEeccCCCCCcEEEEecCCCc
Confidence 5566 8899999999999999999887665543211 111111122111 127889999997 899999999999
Q ss_pred EEEEECCCcee--eeEeecCCcceEEEEEecCC----CEEEEEeCCCcEEEEECCCC-----------------------
Q psy10942 436 IKLWCLTDYVC--LKSLEGHDASVLRCHFINKG----TQIVSTGADGLLKLWSIKTS----------------------- 486 (537)
Q Consensus 436 i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~v~vwd~~~~----------------------- 486 (537)
+.+|+...++. +..+.+|...|++++|+|++ ++|++++.||.|++||+.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (351)
T 3f3f_A 194 IIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVD 273 (351)
T ss_dssp EEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------------
T ss_pred EEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccc
Confidence 98888877654 77788899999999999998 89999999999999999775
Q ss_pred -----------------------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 487 -----------------------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 487 -----------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+.+..+.+|...| +++ +|+|++++|++++.||.|+||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~---~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 274 MDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV-----------WSV---SWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp -----------------CCSEEEEEEEEECTTSSCE-----------EEE---EECSSSCCEEEEETTSCEEEE
T ss_pred cccccccccccceeeeecccccccEEEEEecccccE-----------EEE---EEcCCCCEEEEecCCCcEEEE
Confidence 6777888899999 999 999999999999999999998
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=2.9e-31 Score=249.37 Aligned_cols=285 Identities=16% Similarity=0.110 Sum_probs=225.0
Q ss_pred cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee----hhhhcCCCcceEEEEEecccc-EEEEEeCCc
Q psy10942 44 AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK----ELYQHGLSSPLVRIVRSSVKR-MYAVVTADH 118 (537)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~----~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~ 118 (537)
+.+.+.++ .+.| ++.++++++.|+.|++||+.+++ ......+...|.+++|+|+++ +|++++.|+
T Consensus 10 h~~~v~~~--~~s~--------~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 79 (342)
T 1yfq_A 10 PKDYISDI--KIIP--------SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp CSSCEEEE--EEEG--------GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred CCCcEEEE--EEcC--------CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC
Confidence 55677777 6688 66789999999999999998877 444445557999999999999 999999999
Q ss_pred eEEEEec-ccccCcccccccccceeEEeec--chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhH
Q psy10942 119 NISLYRL-NSETGLEERPNKILKFRKQFVG--FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFD 195 (537)
Q Consensus 119 ~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 195 (537)
.|++||+ .+ .+ ...+.+ |...|.+++|+| ++.+++++.++. |
T Consensus 80 ~i~~wd~~~~-----------~~-~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~----i----------------- 124 (342)
T 1yfq_A 80 EILKVDLIGS-----------PS-FQALTNNEANLGICRICKYG--DDKLIAASWDGL----I----------------- 124 (342)
T ss_dssp CEEEECSSSS-----------SS-EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE----E-----------------
T ss_pred eEEEEEeccC-----------Cc-eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe----E-----------------
Confidence 9999999 77 33 367788 999999999994 788888887777 9
Q ss_pred HHHHHHHHhhhccc---------cccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccC-CCc
Q psy10942 196 KTFERILEAKFKQS---------SSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKT-YHF 264 (537)
Q Consensus 196 ~~wd~~~~~~~~~~---------~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~-~~~ 264 (537)
++||+ .+ .+.. .. .| ...|.++ +|+|++ +++++.|+.++ +|++.. ..
T Consensus 125 ~iwd~-------~~~~~~~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~--l~~~~~d~~i~--i~d~~~~~~- 182 (342)
T 1yfq_A 125 EVIDP-------RNYGDGVIAVKNLNSNNT-----KV--KNKIFTM---DTNSSR--LIVGMNNSQVQ--WFRLPLCED- 182 (342)
T ss_dssp EEECH-------HHHTTBCEEEEESCSSSS-----SS--CCCEEEE---EECSSE--EEEEESTTEEE--EEESSCCTT-
T ss_pred EEEcc-------cccccccccccCCeeeEE-----ee--CCceEEE---EecCCc--EEEEeCCCeEE--EEECCcccc-
Confidence 99999 54 4444 22 47 7889999 888876 77777777777 777665 21
Q ss_pred ccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCc
Q psy10942 265 PLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKT 343 (537)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~ 343 (537)
... ......|...|.+++|+| +++++++++.||.
T Consensus 183 ------------------------------------------~~~---~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 183 ------------------------------------------DNG---TIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp ------------------------------------------CCC---EEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred ------------------------------------------ccc---eeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence 000 111235677899999999 9999999999999
Q ss_pred EEEEEccCC-----ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942 344 VKVWSTTGG-----LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV 418 (537)
Q Consensus 344 i~i~d~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~ 418 (537)
|++|++... .+....+..|.... . -..|.. .+.++
T Consensus 218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~------~~~~~~-----------------~i~~~ 257 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNL-----------------K------DTNLAY-----------------PVNSI 257 (342)
T ss_dssp EEEEECCTTCCSTTCTTCEEEECCCCCT-----------------T------CCSSCC-----------------CEEEE
T ss_pred EEEEEEcCCCcccccccceeeecccccc-----------------c------ccccce-----------------eEEEE
Confidence 999999843 25555555553210 0 001111 78899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC-CcceEEEEEecCCCEEEEEeCCCc-EEEEE
Q psy10942 419 NFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASVLRCHFINKGTQIVSTGADGL-LKLWS 482 (537)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~-v~vwd 482 (537)
+|+|++++|++++.||.|++||+.+++.+..+.+| ...|.+++ |++++|++++.||. .+.|.
T Consensus 258 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred EEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 99999999999999999999999999999999998 99999999 99999999999998 55555
No 105
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=3.4e-30 Score=246.78 Aligned_cols=330 Identities=11% Similarity=0.011 Sum_probs=240.8
Q ss_pred cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942 16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL 95 (537)
Q Consensus 16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 95 (537)
+.++++++.|+.|++||+++++.+..++....+..+ .+.|. +..++++++.++.|++||+.+++.+..+..
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~--~~s~d-------g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~ 72 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGA--VISPD-------GTKVYVANAHSNDVSIIDTATNNVIATVPA 72 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEE--EECTT-------SSEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceE--EECCC-------CCEEEEECCCCCeEEEEECCCCeEEEEEEC
Confidence 356888999999999999999999988877777666 66884 434557777899999999999999999888
Q ss_pred CcceEEEEEeccccEEEEEe-CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccE-EEeeeccc
Q psy10942 96 SSPLVRIVRSSVKRMYAVVT-ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHI-VVASNEYL 173 (537)
Q Consensus 96 ~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~~~~ 173 (537)
+..+.+++|+|++++|++++ .++.|++||+.+ .+.+..+..+. .+.+++|+ ++++.+ ++++.++.
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~-----------~~~~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS-----------NTVAGTVKTGK-SPLGLALS-PDGKKLYVTNNGDKT 139 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-----------TEEEEEEECSS-SEEEEEEC-TTSSEEEEEETTTTE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCC-----------CeEEEEEeCCC-CcceEEEC-CCCCEEEEEeCCCCE
Confidence 88999999999999886555 569999999998 56676776554 57899999 677766 44444444
Q ss_pred cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCee-eeccCCC
Q psy10942 174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLF-PRQSMEP 250 (537)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l-~~~~~d~ 250 (537)
| ++||+ .+++.. +. .+ ..+.++ +|+|+++++ ++++.++
T Consensus 140 ----v-----------------~~~d~-------~~~~~~~~~~-----~~---~~~~~~---~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 140 ----V-----------------SVINT-------VTKAVINTVS-----VG---RSPKGI---AVTPDGTKVYVANFDSM 180 (391)
T ss_dssp ----E-----------------EEEET-------TTTEEEEEEE-----CC---SSEEEE---EECTTSSEEEEEETTTT
T ss_pred ----E-----------------EEEEC-------CCCcEEEEEe-----cC---CCcceE---EECCCCCEEEEEeCCCC
Confidence 8 99998 776665 43 34 456888 999999877 4566667
Q ss_pred cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942 251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP 330 (537)
Q Consensus 251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 330 (537)
.++ +||+.. ++.... ..+...+.+++|+|
T Consensus 181 ~v~--~~d~~~-------------------------------------------~~~~~~------~~~~~~~~~~~~~~ 209 (391)
T 1l0q_A 181 SIS--VIDTVT-------------------------------------------NSVIDT------VKVEAAPSGIAVNP 209 (391)
T ss_dssp EEE--EEETTT-------------------------------------------TEEEEE------EECSSEEEEEEECT
T ss_pred EEE--EEECCC-------------------------------------------CeEEEE------EecCCCccceEECC
Confidence 777 776655 221111 11334678999999
Q ss_pred CCCEEEEEe---CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942 331 NDKLLASGS---LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407 (537)
Q Consensus 331 ~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 407 (537)
+++++++++ .++.|++||+. ..+.+..+..+.
T Consensus 210 ~g~~l~~~~~~~~~~~v~~~d~~-~~~~~~~~~~~~-------------------------------------------- 244 (391)
T 1l0q_A 210 EGTKAYVTNVDKYFNTVSMIDTG-TNKITARIPVGP-------------------------------------------- 244 (391)
T ss_dssp TSSEEEEEEECSSCCEEEEEETT-TTEEEEEEECCS--------------------------------------------
T ss_pred CCCEEEEEecCcCCCcEEEEECC-CCeEEEEEecCC--------------------------------------------
Confidence 999999887 67888888887 444444333221
Q ss_pred CceEEeeeeEEEEcCCCCEE-EEEeCCCcEEEEECCCceeeeEeecCCcceE---EEE------------EecCC-----
Q psy10942 408 NQIITGGVWFVNFSPLDRIL-ISSSGDATIKLWCLTDYVCLKSLEGHDASVL---RCH------------FINKG----- 466 (537)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~---~~~------------~s~~~----- 466 (537)
.+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..|..+.. .+. |+.+.
T Consensus 245 ------~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~ 318 (391)
T 1l0q_A 245 ------DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYI 318 (391)
T ss_dssp ------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEE
T ss_pred ------CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccc
Confidence 45678999999877 5667899999999999999988877655421 122 32221
Q ss_pred -----CEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942 467 -----TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG 528 (537)
Q Consensus 467 -----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~ 528 (537)
..+...+.|..+++|++.+|... .+.. ... .|+++|.+.++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~-------------~~~---~~~~~g~y~~~~ 365 (391)
T 1l0q_A 319 FLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQN-------------PTH---TYSETGIYTVRL 365 (391)
T ss_dssp ETTCCEEEEECCBSCSEEEEECSSSCEE----CSSS-------------CEE---CCSSCEEEEEEE
T ss_pred cccceEEEEeCCCCceEEEEECCCCccc----CcCC-------------CeE---EeCCCceEEEEE
Confidence 23555566888999999887642 1111 123 788888887754
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=4e-30 Score=246.27 Aligned_cols=278 Identities=9% Similarity=0.014 Sum_probs=217.5
Q ss_pred EEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEE-EEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942 68 TFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMY-AVVTADHNISLYRLNSETGLEERPNKILKFRKQFV 146 (537)
Q Consensus 68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 146 (537)
.++++++.++.|++||+.+++.+..+..+..+.+++|+|++++| ++++.|+.|++||+.+ ++....+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~-----------~~~~~~~~ 71 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT-----------NNVIATVP 71 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT-----------TEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCC-----------CeEEEEEE
Confidence 57888899999999999999999999888899999999999987 5666899999999998 67777777
Q ss_pred cchhhhhhhhcccCCCccEEEee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCC
Q psy10942 147 GFSDEILDIALLGEEDSHIVVAS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDE 224 (537)
Q Consensus 147 ~~~~~v~~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~ 224 (537)
.+. .+.+++|+ +++++++++. .++. | ++||+ .+++.. .. .+
T Consensus 72 ~~~-~v~~~~~s-pdg~~l~~~~~~~~~----v-----------------~v~d~-------~~~~~~~~~-----~~-- 114 (391)
T 1l0q_A 72 AGS-SPQGVAVS-PDGKQVYVTNMASST----L-----------------SVIDT-------TSNTVAGTV-----KT-- 114 (391)
T ss_dssp CSS-SEEEEEEC-TTSSEEEEEETTTTE----E-----------------EEEET-------TTTEEEEEE-----EC--
T ss_pred CCC-CccceEEC-CCCCEEEEEECCCCE----E-----------------EEEEC-------CCCeEEEEE-----eC--
Confidence 666 79999999 6777775544 3344 8 99999 777666 22 33
Q ss_pred cCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942 225 LKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT 303 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~ 303 (537)
...+.++ +|+|+++++ ++++.++.++ +|++..
T Consensus 115 ~~~~~~~---~~s~dg~~l~~~~~~~~~v~--~~d~~~------------------------------------------ 147 (391)
T 1l0q_A 115 GKSPLGL---ALSPDGKKLYVTNNGDKTVS--VINTVT------------------------------------------ 147 (391)
T ss_dssp SSSEEEE---EECTTSSEEEEEETTTTEEE--EEETTT------------------------------------------
T ss_pred CCCcceE---EECCCCCEEEEEeCCCCEEE--EEECCC------------------------------------------
Confidence 4568899 999999877 5666677777 776655
Q ss_pred CCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942 304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI 382 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 382 (537)
++... .+.. ...+.+++|+|+++.+ ++++.++.|++||+. ..+....+..+ .
T Consensus 148 -~~~~~-----~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~~~~-~------------------ 200 (391)
T 1l0q_A 148 -KAVIN-----TVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTV-TNSVIDTVKVE-A------------------ 200 (391)
T ss_dssp -TEEEE-----EEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEECS-S------------------
T ss_pred -CcEEE-----EEec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECC-CCeEEEEEecC-C------------------
Confidence 22111 1111 2346899999999887 566778899999988 44433333211 1
Q ss_pred CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe---CCCcEEEEECCCceeeeEeecCCcceEE
Q psy10942 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS---GDATIKLWCLTDYVCLKSLEGHDASVLR 459 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 459 (537)
.+.+++|+|++++|++++ .++.|++||+.+++.+..+..|. .+.+
T Consensus 201 -------------------------------~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~ 248 (391)
T 1l0q_A 201 -------------------------------APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAG 248 (391)
T ss_dssp -------------------------------EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEE
T ss_pred -------------------------------CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccE
Confidence 677889999999999888 68999999999999998888765 4789
Q ss_pred EEEecCCCEE-EEEeCCCcEEEEECCCCeeEEEecCCccce
Q psy10942 460 CHFINKGTQI-VSTGADGLLKLWSIKTSTCVSTFDKHALKI 499 (537)
Q Consensus 460 ~~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i 499 (537)
++|+|++++| ++++.|+.|++||+.+++.+..+..|..+.
T Consensus 249 ~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~ 289 (391)
T 1l0q_A 249 IAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPY 289 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE
T ss_pred EEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCC
Confidence 9999999987 566889999999999999999998776553
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.8e-31 Score=254.55 Aligned_cols=258 Identities=17% Similarity=0.203 Sum_probs=199.5
Q ss_pred ehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC-CCccE
Q psy10942 88 KELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE-EDSHI 165 (537)
Q Consensus 88 ~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l 165 (537)
+.+..+..| +.|.+++|+|++++||+++.|+.|++||+.... .+....+.+|...|.+++|+++ ++.+|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~~l 72 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------HKLIDTLTGHEGPVWRVDWAHPKFGTIL 72 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE---------EEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc---------ceeeeEecCCCCcEEEEEeCCCCCCCEE
Confidence 344455544 689999999999999999999999999998311 5777889999999999999844 27788
Q ss_pred EEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc--cc--ccccccccCCCcCeEEEEeccCcccC--
Q psy10942 166 VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS--QQ--KHNTERLGRDELKTVTLLERGKTVKE-- 239 (537)
Q Consensus 166 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~--l~~~~~~~h~~~~~v~~~~~~~~s~~-- 239 (537)
++++.++. | ++||+ .+++ .. +. +| ...|.++ +|+|+
T Consensus 73 ~s~~~dg~----v-----------------~iwd~-------~~~~~~~~~~~~-----~~--~~~v~~~---~~~~~~~ 114 (379)
T 3jrp_A 73 ASCSYDGK----V-----------------LIWKE-------ENGRWSQIAVHA-----VH--SASVNSV---QWAPHEY 114 (379)
T ss_dssp EEEETTSC----E-----------------EEEEE-------ETTEEEEEEEEC-----CC--SSCEEEE---EECCGGG
T ss_pred EEeccCCE----E-----------------EEEEc-------CCCceeEeeeec-----CC--CcceEEE---EeCCCCC
Confidence 88887776 9 99999 7665 22 55 78 9999999 99999
Q ss_pred CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942 240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH 319 (537)
Q Consensus 240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 319 (537)
+++|++++.|+.++ +|++...... . ...+..|
T Consensus 115 ~~~l~~~~~d~~i~--v~d~~~~~~~-----------------------------------------~-----~~~~~~~ 146 (379)
T 3jrp_A 115 GPLLLVASSDGKVS--VVEFKENGTT-----------------------------------------S-----PIIIDAH 146 (379)
T ss_dssp CSEEEEEETTSEEE--EEECCTTSCC-----------------------------------------C-----EEEEECC
T ss_pred CCEEEEecCCCcEE--EEecCCCCce-----------------------------------------e-----eEEecCC
Confidence 88999988888888 8887763100 0 1123467
Q ss_pred CCCeEEEEEcC-------------CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCe
Q psy10942 320 EKDINCVTVSP-------------NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTST 386 (537)
Q Consensus 320 ~~~v~~~~~s~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 386 (537)
...|.+++|+| ++++|++++.|+.|++||++...... .
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----------------------------~ 197 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------V 197 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEE-----------------------------E
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce-----------------------------e
Confidence 88899999999 68888888888888888887322111 1
Q ss_pred eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCCCcEEEEECCCce-----eeeEeecCCcceE
Q psy10942 387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGDATIKLWCLTDYV-----CLKSLEGHDASVL 458 (537)
Q Consensus 387 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~v~ 458 (537)
....+..|.. .|.+++|+|+ +++|++++.||.|++||+.+++ .+.....|...|.
T Consensus 198 ~~~~~~~h~~-----------------~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 260 (379)
T 3jrp_A 198 LESTLEGHSD-----------------WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW 260 (379)
T ss_dssp EEEEECCCSS-----------------CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEE
T ss_pred eEEEEecccC-----------------cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEE
Confidence 1122233333 7888999999 8999999999999999998853 2333344888999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 459 RCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
+++|+|++++|++++.||.|++|++..+
T Consensus 261 ~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 261 RASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 9999999999999999999999998743
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=5.2e-30 Score=249.05 Aligned_cols=300 Identities=13% Similarity=0.080 Sum_probs=225.3
Q ss_pred EEEeCccc--eEEeeeccce--ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeE--
Q psy10942 70 VLAGGEKS--LLHYYETSAV--KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRK-- 143 (537)
Q Consensus 70 ~~~~~~~~--~i~~wd~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-- 143 (537)
.+.++.++ .|..+|..++ +.+..+..+..+.+++|+|++.++++++.++.|++||+.+ ++...
T Consensus 92 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~-----------g~~~~~~ 160 (433)
T 3bws_A 92 RIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINS-----------GQTVRLS 160 (433)
T ss_dssp EESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTT-----------CCEEEEC
T ss_pred eecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCC-----------CeEeeec
Confidence 33455666 4555555434 5666676677788999999888888888889999999998 45554
Q ss_pred ---EeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccc
Q psy10942 144 ---QFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTE 218 (537)
Q Consensus 144 ---~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~ 218 (537)
.+.+|...|.+++|+ +++..+++++.++. | ++||+ .+++.. +.
T Consensus 161 ~~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~----v-----------------~~~d~-------~~~~~~~~~~--- 208 (433)
T 3bws_A 161 PPEKYKKKLGFVETISIP-EHNELWVSQMQANA----V-----------------HVFDL-------KTLAYKATVD--- 208 (433)
T ss_dssp CCHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTE----E-----------------EEEET-------TTCCEEEEEE---
T ss_pred CcccccccCCceeEEEEc-CCCEEEEEECCCCE----E-----------------EEEEC-------CCceEEEEEc---
Confidence 345778889999997 77777777776666 9 99999 776655 55
Q ss_pred cccCCCcCeEEEEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942 219 RLGRDELKTVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV 297 (537)
Q Consensus 219 ~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i 297 (537)
.| ...+.++ +|+|++++++ +++.++.|+ +|++..
T Consensus 209 --~~--~~~~~~~---~~~~~~~~l~~~~~~~~~i~--~~d~~~------------------------------------ 243 (433)
T 3bws_A 209 --LT--GKWSKIL---LYDPIRDLVYCSNWISEDIS--VIDRKT------------------------------------ 243 (433)
T ss_dssp --CS--SSSEEEE---EEETTTTEEEEEETTTTEEE--EEETTT------------------------------------
T ss_pred --CC--CCCeeEE---EEcCCCCEEEEEecCCCcEE--EEECCC------------------------------------
Confidence 78 8899999 9999998774 444667777 776654
Q ss_pred EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe--------CCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942 298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS--------LDKTVKVWSTTGGLKLLNVLRGHKKGTQIV 369 (537)
Q Consensus 298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~ 369 (537)
++... .+. +...+.+++|+|+++.+++++ .|+.|++||+. ..+.+..+.
T Consensus 244 -------~~~~~-----~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~-~~~~~~~~~--------- 300 (433)
T 3bws_A 244 -------KLEIR-----KTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD-KEKLIDTIG--------- 300 (433)
T ss_dssp -------TEEEE-----ECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT-TTEEEEEEE---------
T ss_pred -------CcEEE-----Eec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC-CCcEEeecc---------
Confidence 22111 111 123488999999999999887 35666666665 333222211
Q ss_pred EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE-EEEeCCCcEEEEECCCceeee
Q psy10942 370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL-ISSSGDATIKLWCLTDYVCLK 448 (537)
Q Consensus 370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~ 448 (537)
+. +.+..++|+|+++.+ ++++.++.|++||+.+++.+.
T Consensus 301 ------------------------~~-----------------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 301 ------------------------PP-----------------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp ------------------------EE-----------------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ------------------------CC-----------------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 00 156778999999755 566889999999999999888
Q ss_pred EeecCCcceEEEEEecCCCEEEEEeC---------------CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccc
Q psy10942 449 SLEGHDASVLRCHFINKGTQIVSTGA---------------DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGL 513 (537)
Q Consensus 449 ~~~~~~~~v~~~~~s~~~~~l~s~~~---------------dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 513 (537)
.+. +...+.+++|+|++++|++++. ||.|++||+.+++.+..+..+ ..+ .++
T Consensus 340 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~-----------~~~ 406 (433)
T 3bws_A 340 SIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQP-----------TGL 406 (433)
T ss_dssp EEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSE-----------EEE
T ss_pred Eec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCC-----------ceE
Confidence 887 6778999999999999998876 579999999999999888764 356 788
Q ss_pred cceeeecCCCEEEEEeC-CCCEEeC
Q psy10942 514 PRQLCSRNSDCEYRGGW-SPQVVVY 537 (537)
Q Consensus 514 ~~~~~s~~~~~l~s~~~-dg~i~vW 537 (537)
+|+|+|++|++++. |+.|++|
T Consensus 407 ---~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 407 ---DVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp ---EECTTSCEEEEEETTTTEEEEE
T ss_pred ---EEcCCCCEEEEEECCCCeEEEE
Confidence 99999999998875 9999998
No 109
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=7.9e-30 Score=239.90 Aligned_cols=276 Identities=10% Similarity=0.086 Sum_probs=192.4
Q ss_pred cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEE
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVW 300 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~ 300 (537)
+| ...|.++ +|+|||++|++|+.++ ++ +|+............ ............. ..+++++.|++|++|
T Consensus 17 ~h--~~~V~~v---~fs~dg~~la~g~~~~-~~--iw~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 17 HV--SNPVTDY---EFNQDQSCLILSTLKS-FE--IYNVHPVAHIMSQEM-RHLSKVRMLHRTN-YVAFVTGVKEVVHIW 86 (355)
T ss_dssp ----CCCCCEE---EECTTSSEEEEECSSE-EE--EEEETTEEEEEEEEC-SCCCEEEECTTSS-EEEEECSSTTEEEEE
T ss_pred cC--CCceEEE---EECCCCCEEEEEcCCE-EE--EEecCCcceeeeeec-CCeEEEEEcCCCC-EEEEEECCccEEEEE
Confidence 89 9999999 9999999999998775 78 999876422111100 0011111111111 344678888999999
Q ss_pred ECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE-------ecCCCCEEEE--E
Q psy10942 301 STTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-------GHKKGTQIVS--T 371 (537)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~l~~--~ 371 (537)
|..+++....+ .+...|.+++++++. ++++ .|+.|++||+....+.+..+. ..+ ..++. +
T Consensus 87 d~~~~~~~~~~------~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 87 DDVKKQDVSRI------KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNE 155 (355)
T ss_dssp ETTTTEEEEEE------ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEES
T ss_pred ECCCCcEEEEE------ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCC
Confidence 99998764432 356789999999764 4443 478999999984413222221 122 45555 5
Q ss_pred cCCCcEEEEECCCCee----------------eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942 372 GADGLLKLWSIKTSTC----------------VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT 435 (537)
Q Consensus 372 ~~d~~i~i~d~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (537)
+.+|.|++||+.+++. +..+.+|.. .|.+++|+|++++|++|+.|++
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~-----------------~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN-----------------PIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSS-----------------CEEEEEECTTSSEEEEEETTCS
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC-----------------ceEEEEECCCCCEEEEEeCCCC
Confidence 8899999999998751 455666655 7889999999999999999998
Q ss_pred -EEEEECCCceeeeEee-c-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE--EEecC-----Ccccee---c-
Q psy10942 436 -IKLWCLTDYVCLKSLE-G-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV--STFDK-----HALKIR---N- 501 (537)
Q Consensus 436 -i~i~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~--~~~~~-----~~~~i~---~- 501 (537)
|++||+.+++++..+. + |...|++++|+|++++|++++.|++|++||++.+... ..+.. +..... .
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 9999999999999998 5 9999999999999999999999999999999765321 11111 000000 0
Q ss_pred -cCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 502 -SDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 502 -~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
...........+ +|++|+++|++++.||.+++|
T Consensus 299 ~~~~~~~~~~~~~---a~~~d~~~l~~~~~dg~~~~~ 332 (355)
T 3vu4_A 299 KLSVDKHVRGCKI---AWISESSLVVVWPHTRMIETF 332 (355)
T ss_dssp ECCCCTTCCCCEE---EESSSSEEEEEETTTTEEEEE
T ss_pred EeccCCCCCceEE---EEeCCCCEEEEEeCCCeEEEE
Confidence 000011111445 999999999999999999886
No 110
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.98 E-value=1e-29 Score=272.79 Aligned_cols=424 Identities=8% Similarity=-0.031 Sum_probs=289.7
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCc------cce
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGE------KSL 78 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 78 (537)
+.+.+|| ++ .|+.++. +.|.+|+++.++......+...+..+ .++| ++++|+.++. +..
T Consensus 17 ~~~~~~S--~~--~iaf~~~-~~l~~~~~~gg~~~~lt~~~~~v~~~--~~SP--------DG~~la~~s~~~~~~~~~~ 81 (1045)
T 1k32_A 17 LLNPDIH--GD--RIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNA--RFFP--------DGRKIAIRVMRGSSLNTAD 81 (1045)
T ss_dssp CEEEEEE--TT--EEEEEET-TEEEEEETTTCCEEEEECSSSEEEEE--EECT--------TSSEEEEEEEESTTCCEEE
T ss_pred EeCcEEe--CC--EEEEEEC-CcEEEEECCCCcEEEeeeCCCcccCe--EECC--------CCCEEEEEEeeccCCCCCe
Confidence 5677888 43 5666654 57999999988766555555566666 6688 6677776643 357
Q ss_pred EEeeeccceehhhhcCCC-cce-------EEEEEeccccEEEEEeCC------ceEEEEecccccCcccccccccceeEE
Q psy10942 79 LHYYETSAVKELYQHGLS-SPL-------VRIVRSSVKRMYAVVTAD------HNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 79 i~~wd~~~~~~~~~~~~~-~~v-------~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
|++||+.+++. ..+..+ ..+ ..++|||||+.+++++.+ ..|.+|++.+ ++. ..
T Consensus 82 i~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~-----------g~~-~~ 148 (1045)
T 1k32_A 82 LYFYNGENGEI-KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDG-----------INF-VP 148 (1045)
T ss_dssp EEEEETTTTEE-EECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGG-----------TEE-EE
T ss_pred EEEEECCCCCe-EEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCC-----------CCe-EE
Confidence 99999988774 445544 466 899999999977776644 3577777776 333 33
Q ss_pred eecchhhhhhhhcccCCCccEEEeeecccc--------CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cc
Q psy10942 145 FVGFSDEILDIALLGEEDSHIVVASNEYLN--------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KH 215 (537)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~ 215 (537)
+..+. ...++|+| + .++++..+... .... ++|.. ...++.. +.
T Consensus 149 l~~~~--~~~~~~sp--G-~l~~~~~~~~~~~~~~~~g~~~~-----------------~lw~~------~~~~~~~~l~ 200 (1045)
T 1k32_A 149 LNLGP--ATHILFAD--G-RRVIGRNTFELPHWKGYRGGTRG-----------------KIWIE------VNSGAFKKIV 200 (1045)
T ss_dssp CCSCS--CSEEEEET--T-EEEEEESCSCCTTSTTCCSTTCC-----------------EEEEE------EETTEEEEEE
T ss_pred ecCCC--cceeeeCC--C-EEEEeccCCCccccccccCCCcC-----------------CEEEE------CCCCCeEECc
Confidence 33332 34567994 5 55554432220 0012 33432 0112222 55
Q ss_pred ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc-ccccceeeeeeCCcceEEEEEeCC
Q psy10942 216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF-VPEAEHGAFYTGGTVELLASGSLD 294 (537)
Q Consensus 216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~d 294 (537)
+| ...+.++ .|+++ .++++++.++.+. +|.+........... ...........++ +.++.+ .+
T Consensus 201 -----~~--~~~v~~~---~~s~d-~l~~~~~~dg~~~--l~~~~~~g~~~~~l~~~~~~~~~~~SpDG--~~la~~-~~ 264 (1045)
T 1k32_A 201 -----DM--STHVSSP---VIVGH-RIYFITDIDGFGQ--IYSTDLDGKDLRKHTSFTDYYPRHLNTDG--RRILFS-KG 264 (1045)
T ss_dssp -----CC--SSCCEEE---EEETT-EEEEEECTTSSCE--EEEEETTSCSCEECCCCCSSCEEEEEESS--SCEEEE-ET
T ss_pred -----CC--CCcccce---EEeCC-EEEEEEeccCceE--EEEEeCCCCcceEecCCCCcceeeEcCCC--CEEEEE-eC
Confidence 89 9999999 99988 6777788889999 998764222111100 0001111122222 345555 48
Q ss_pred CeEEEEECCCCceeeeeecc-------cccccCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEccCCce---------eeE
Q psy10942 295 KTVKVWSTTGGLKLLNVLRG-------HKKGHEKDINCVTVS-PNDKLLASGSLDKTVKVWSTTGGLK---------LLN 357 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~s-~~~~~l~~~~~d~~i~i~d~~~~~~---------~~~ 357 (537)
+.|++|++..... ..+ .. ....|...+.+++|+ |||+.|++++ ++.+++|++..... .+.
T Consensus 265 ~~i~~~d~~~~~l-~~l-~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 341 (1045)
T 1k32_A 265 GSIYIFNPDTEKI-EKI-EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYV 341 (1045)
T ss_dssp TEEEEECTTTCCE-EEC-CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEE
T ss_pred CEEEEecCCceEe-eee-ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEE
Confidence 9999999854332 111 11 001244568999999 9999999887 78899999873211 233
Q ss_pred EEEecCCCCEEEEEcCCCcEE-EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942 358 VLRGHKKGTQIVSTGADGLLK-LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436 (537)
Q Consensus 358 ~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 436 (537)
....+ ++..++.++.++.+. +||+.+++..... .+.. .+..++|+|||++|++++.++.|
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~-----------------~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLG-----------------NVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCC-----------------SEEEEEECTTSSEEEEEETTSEE
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCcc-----------------ceeeeEECCCCCEEEEECCCCeE
Confidence 34455 677888888888888 8999877644332 3332 67889999999999999999999
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC----------cEEEEECCCCeeEEEecCCccceeccCCCC
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG----------LLKLWSIKTSTCVSTFDKHALKIRNSDSEN 506 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~ 506 (537)
++||+.+++....+.+|...+.+++|||||++|++++.++ .|++||+.+++ ...+..|...+
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~------- 474 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD------- 474 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE-------
T ss_pred EEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCccc-------
Confidence 9999999988888878999999999999999999887654 89999999887 67777787777
Q ss_pred CCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 507 DHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 507 ~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
..+ +|+|||++|++++.++..++|
T Consensus 475 ----~~~---~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 475 ----YAP---AFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp ----EEE---EECTTSCEEEEEESCCCCCEE
T ss_pred ----CCc---eEcCCCCEEEEEecccCCcCc
Confidence 778 999999999999887665443
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.4e-31 Score=257.17 Aligned_cols=282 Identities=12% Similarity=0.141 Sum_probs=212.2
Q ss_pred CcEEEEEeCccceEEeeeccce-e---hhhhcCCC-cceEEEEEec-cccEEEEEeCCceEEEEecccccCccccccccc
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAV-K---ELYQHGLS-SPLVRIVRSS-VKRMYAVVTADHNISLYRLNSETGLEERPNKIL 139 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~-~---~~~~~~~~-~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~ 139 (537)
...++++++.+|.|++|++.+. + .+..+..| +.|.+++|+| ++++||+++.|+.|++||+.++... ....
T Consensus 46 ~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~----~~~~ 121 (402)
T 2aq5_A 46 FMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV----LPLR 121 (402)
T ss_dssp EEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS----SCBC
T ss_pred eEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc----cccC
Confidence 3345556788999999998654 3 23344444 6999999999 9999999999999999999883110 0011
Q ss_pred ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--c--c
Q psy10942 140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--K--H 215 (537)
Q Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l--~ 215 (537)
+.+..+.+|...|.+++|+|.+...+++++.++. | ++||+ .+++.. + .
T Consensus 122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~----i-----------------~iwd~-------~~~~~~~~~~~~ 173 (402)
T 2aq5_A 122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV----I-----------------LVWDV-------GTGAAVLTLGPD 173 (402)
T ss_dssp SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC----E-----------------EEEET-------TTTEEEEEECTT
T ss_pred CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE----E-----------------EEEEC-------CCCCccEEEecC
Confidence 5677899999999999999433367888777766 9 99999 777665 4 5
Q ss_pred ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942 216 NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK 295 (537)
Q Consensus 216 ~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~ 295 (537)
+| ...|.++ +|+|++++|++++.|+.++ +|++..+
T Consensus 174 -----~~--~~~v~~~---~~~~~~~~l~~~~~d~~i~--iwd~~~~--------------------------------- 208 (402)
T 2aq5_A 174 -----VH--PDTIYSV---DWSRDGALICTSCRDKRVR--VIEPRKG--------------------------------- 208 (402)
T ss_dssp -----TC--CSCEEEE---EECTTSSCEEEEETTSEEE--EEETTTT---------------------------------
T ss_pred -----CC--CCceEEE---EECCCCCEEEEEecCCcEE--EEeCCCC---------------------------------
Confidence 89 9999999 9999999999999888888 8887662
Q ss_pred eEEEEECCCCceeeeeecccc-cccCCC-eEEEEEcCCCCEEEEE---eCCCcEEEEEccCCceeeEEEEecCCCCEEEE
Q psy10942 296 TVKVWSTTGGLKLLNVLRGHK-KGHEKD-INCVTVSPNDKLLASG---SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVS 370 (537)
Q Consensus 296 ~i~i~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~ 370 (537)
+. ...+ ..|.+. +.++.|+|++++|+++ +.|+.|++||+.....++......
T Consensus 209 ----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-------- 265 (402)
T 2aq5_A 209 ----------TV-----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD-------- 265 (402)
T ss_dssp ----------EE-----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC--------
T ss_pred ----------ce-----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc--------
Confidence 11 0111 234443 7899999999999999 789999999998433322222211
Q ss_pred EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE-EeCCCcEEEEECCCcee-ee
Q psy10942 371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS-SSGDATIKLWCLTDYVC-LK 448 (537)
Q Consensus 371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~-~~ 448 (537)
+.. .+.+++|+|++++|++ ++.||.|++||+.++++ +.
T Consensus 266 -----------------------~~~-----------------~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~ 305 (402)
T 2aq5_A 266 -----------------------TSS-----------------GVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLH 305 (402)
T ss_dssp -----------------------CCS-----------------SCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEE
T ss_pred -----------------------CCC-----------------ceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceE
Confidence 111 6788999999999875 55799999999998774 44
Q ss_pred Eeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942 449 SLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV 489 (537)
Q Consensus 449 ~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 489 (537)
.+.. |...|.+++|+|++.++++ .++.+++|++.+++..
T Consensus 306 ~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 306 YLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp EEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred eecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 5544 4588999999999988775 5669999999887543
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.2e-30 Score=252.58 Aligned_cols=296 Identities=16% Similarity=0.165 Sum_probs=222.6
Q ss_pred ceEEEEEeccc----------cEEEEEeC----CceEEEEecccccC--c-----------cc---ccccccceeEEeec
Q psy10942 98 PLVRIVRSSVK----------RMYAVVTA----DHNISLYRLNSETG--L-----------EE---RPNKILKFRKQFVG 147 (537)
Q Consensus 98 ~v~~~~~s~~~----------~~la~~~~----d~~i~iwd~~~~~~--~-----------~~---~~~~~~~~~~~~~~ 147 (537)
+..++.|.|+. .++++|+. .+.|.++++.-... . +. ....+.-.......
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 126 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN 126 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence 56777777764 46777765 35677776541000 0 00 00111112345667
Q ss_pred chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc----------cccc--cc
Q psy10942 148 FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS----------SSQQ--KH 215 (537)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~----------~~~~--l~ 215 (537)
|.+.|.+++|+|.++..+++++.++. | ++|++ .. .... +.
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~----V-----------------~vwd~-------~~~~~~~~~~~~~~~~~~~~ 178 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSD----V-----------------LVFDY-------TKHPSKPEPSGECQPDLRLR 178 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSC----E-----------------EEEEG-------GGSCSSCCTTCCCCCSEEEE
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCc----E-----------------EEEEC-------CCcccccCccccCCCcEEec
Confidence 99999999999544667777776666 9 99998 43 2222 55
Q ss_pred ccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC
Q psy10942 216 NTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD 294 (537)
Q Consensus 216 ~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d 294 (537)
+| ...|.++ +|+|++. +|++++.||.|+ +|++........
T Consensus 179 -----~h--~~~v~~l---~~~~~~~~~l~s~~~dg~i~--vwd~~~~~~~~~--------------------------- 219 (430)
T 2xyi_A 179 -----GH--QKEGYGL---SWNPNLNGYLLSASDDHTIC--LWDINATPKEHR--------------------------- 219 (430)
T ss_dssp -----CC--SSCCCCE---EECTTSTTEEEEECTTSCEE--EEETTSCCBGGG---------------------------
T ss_pred -----CC--CCCeEEE---EeCCCCCCeEEEEeCCCeEE--EEeCCCCCCCCc---------------------------
Confidence 89 9999999 9999988 999999999999 999887321100
Q ss_pred CeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCc--eeeEEEEecCCCCEEEEE
Q psy10942 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGL--KLLNVLRGHKKGTQIVST 371 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~l~~~ 371 (537)
.+ . . ...+..|...|.+++|+| ++.+|++++.|+.|++||++... +.+..+..|..
T Consensus 220 -~~---~---------~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------- 278 (430)
T 2xyi_A 220 -VI---D---------A-KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA------- 278 (430)
T ss_dssp -EE---E---------C-SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS-------
T ss_pred -ee---c---------c-ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC-------
Confidence 00 0 0 223457888999999999 77899999999999999998331 23333333322
Q ss_pred cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEEEEECCC-ceeeeE
Q psy10942 372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCLTD-YVCLKS 449 (537)
Q Consensus 372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~ 449 (537)
.+.+++|+|+++ ++++|+.||.|++||+++ .+++..
T Consensus 279 ------------------------------------------~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 279 ------------------------------------------EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp ------------------------------------------CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred ------------------------------------------CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 788899999886 789999999999999998 577889
Q ss_pred eecCCcceEEEEEecCCC-EEEEEeCCCcEEEEECCC--------------CeeEEEecCCccceeccCCCCCCcccccc
Q psy10942 450 LEGHDASVLRCHFINKGT-QIVSTGADGLLKLWSIKT--------------STCVSTFDKHALKIRNSDSENDHKGFGLP 514 (537)
Q Consensus 450 ~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~vwd~~~--------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 514 (537)
+..|...|.+++|+|+++ +|++++.|+.|++||+.. .+++..+.+|...| .++
T Consensus 317 ~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~- 384 (430)
T 2xyi_A 317 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI-----------SDF- 384 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE-----------EEE-
T ss_pred eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc-----------eEE-
Confidence 999999999999999985 799999999999999976 36777888899889 999
Q ss_pred ceeeecCCC-EEEEEeCCCCEEeC
Q psy10942 515 RQLCSRNSD-CEYRGGWSPQVVVY 537 (537)
Q Consensus 515 ~~~~s~~~~-~l~s~~~dg~i~vW 537 (537)
+|+|+++ +|++++.||.|+||
T Consensus 385 --~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 385 --SWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp --EECSSSTTEEEEEETTSEEEEE
T ss_pred --EECCCCCCEEEEEECCCCEEEe
Confidence 9999999 89999999999998
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=8.9e-30 Score=247.41 Aligned_cols=308 Identities=8% Similarity=0.029 Sum_probs=228.3
Q ss_pred cCcc--eEEEEEcCcc--ceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhh-----c
Q psy10942 23 GRDK--VLFTWDLSSR--KQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQ-----H 93 (537)
Q Consensus 23 ~~~g--~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~-----~ 93 (537)
++++ .|..||.+++ +.+..++....+..+ .+.| ++.++++++.++.|++||+.+++.+.. +
T Consensus 96 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~s~--------~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 165 (433)
T 3bws_A 96 PEELNEKLIALDKEGITHRFISRFKTGFQPKSV--RFID--------NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKY 165 (433)
T ss_dssp GGGGTTCEEECCBTTCSEEEEEEEECSSCBCCC--EESS--------SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHH
T ss_pred cCCCceEEEEECCCCCcceEEEEEcCCCCceEE--EEeC--------CCeEEEEeCCCCeEEEEECCCCeEeeecCcccc
Confidence 3444 4444455445 556666655555555 5576 668889999899999999999887753 2
Q ss_pred C-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee-ec
Q psy10942 94 G-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS-NE 171 (537)
Q Consensus 94 ~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~~ 171 (537)
. +.+.|.+++|+|+++++++++.|+.|++||+.+ .+....+..|...+.+++|+ ++++.++++. .+
T Consensus 166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 233 (433)
T 3bws_A 166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT-----------LAYKATVDLTGKWSKILLYD-PIRDLVYCSNWIS 233 (433)
T ss_dssp HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT-----------CCEEEEEECSSSSEEEEEEE-TTTTEEEEEETTT
T ss_pred cccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC-----------ceEEEEEcCCCCCeeEEEEc-CCCCEEEEEecCC
Confidence 2 335899999999999999999999999999998 67788888898899999999 6666665443 44
Q ss_pred cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC
Q psy10942 172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP 250 (537)
Q Consensus 172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~ 250 (537)
+. | ++||+ .+++.. .. .+ ...+.++ +|+|+++++++++.+.
T Consensus 234 ~~----i-----------------~~~d~-------~~~~~~~~~-----~~--~~~~~~~---~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 234 ED----I-----------------SVIDR-------KTKLEIRKT-----DK--IGLPRGL---LLSKDGKELYIAQFSA 275 (433)
T ss_dssp TE----E-----------------EEEET-------TTTEEEEEC-----CC--CSEEEEE---EECTTSSEEEEEEEES
T ss_pred Cc----E-----------------EEEEC-------CCCcEEEEe-----cC--CCCceEE---EEcCCCCEEEEEECCC
Confidence 44 8 99998 776665 22 23 4568999 9999999888776422
Q ss_pred cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC
Q psy10942 251 STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP 330 (537)
Q Consensus 251 ~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 330 (537)
.-. . ..|+.|++||+.+++.... ..|...+.+++|+|
T Consensus 276 ~~~---~----------------------------------~~dg~i~~~d~~~~~~~~~------~~~~~~~~~~~~~~ 312 (433)
T 3bws_A 276 SNQ---E----------------------------------SGGGRLGIYSMDKEKLIDT------IGPPGNKRHIVSGN 312 (433)
T ss_dssp CTT---C----------------------------------SCCEEEEEEETTTTEEEEE------EEEEECEEEEEECS
T ss_pred Ccc---c----------------------------------cCCCeEEEEECCCCcEEee------ccCCCCcceEEECC
Confidence 111 0 1256777777776654221 23455788999999
Q ss_pred CCCEE-EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942 331 NDKLL-ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409 (537)
Q Consensus 331 ~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 409 (537)
+++.+ ++++.|+.|++||+. ..+.+..+. +..
T Consensus 313 ~g~~l~~~~~~~~~v~v~d~~-~~~~~~~~~-~~~--------------------------------------------- 345 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVYDLK-EKKVQKSIP-VFD--------------------------------------------- 345 (433)
T ss_dssp STTEEEEEETTTTEEEEEETT-TTEEEEEEE-CSS---------------------------------------------
T ss_pred CCCEEEEEecCCCEEEEEECC-CCcEEEEec-CCC---------------------------------------------
Confidence 99755 556788999999988 444444332 111
Q ss_pred eEEeeeeEEEEcCCCCEEEEEeC---------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC
Q psy10942 410 IITGGVWFVNFSPLDRILISSSG---------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA 474 (537)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 474 (537)
.+.+++|+|+++++++++. ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++.
T Consensus 346 ----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 346 ----KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp ----SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET
T ss_pred ----CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC
Confidence 5677888888888887776 57999999999999988886 457899999999999998875
Q ss_pred -CCcEEEEECCC
Q psy10942 475 -DGLLKLWSIKT 485 (537)
Q Consensus 475 -dg~v~vwd~~~ 485 (537)
|+.|++|+++.
T Consensus 421 ~d~~i~v~~~~~ 432 (433)
T 3bws_A 421 LDHQIRVYRRDG 432 (433)
T ss_dssp TTTEEEEEEETT
T ss_pred CCCeEEEEEecC
Confidence 99999999853
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.3e-31 Score=250.27 Aligned_cols=248 Identities=18% Similarity=0.209 Sum_probs=196.5
Q ss_pred ceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcc--ccccc--cc
Q psy10942 140 KFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQ--SSSQQ--KH 215 (537)
Q Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~--~~~~~--l~ 215 (537)
+++..+.+|.+.|.+++|+ +++++|++++.++. | ++||+ . +.+.. +.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s-~~~~~l~~~~~dg~----i-----------------~iw~~-------~~~~~~~~~~~~ 52 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLD-YYGKRLATCSSDKT----I-----------------KIFEV-------EGETHKLIDTLT 52 (379)
T ss_dssp ---CCEEECCCCEEEEEEC-SSSSEEEEEETTSC----E-----------------EEEEE-------ETTEEEEEEEEC
T ss_pred CccEEecCCcccEEEEEEc-CCCCEEEEEECCCc----E-----------------EEEec-------CCCcceeeeEec
Confidence 4566789999999999999 78888888887776 9 99998 6 33333 66
Q ss_pred ccccccCCCcCeEEEEeccCcccC--CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942 216 NTERLGRDELKTVTLLERGKTVKE--EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL 293 (537)
Q Consensus 216 ~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 293 (537)
+| ...|.++ +|+++ +++|++++.|+.|+ +|++..+..
T Consensus 53 -----~h--~~~v~~~---~~~~~~~~~~l~s~~~dg~v~--iwd~~~~~~----------------------------- 91 (379)
T 3jrp_A 53 -----GH--EGPVWRV---DWAHPKFGTILASCSYDGKVL--IWKEENGRW----------------------------- 91 (379)
T ss_dssp -----CC--SSCEEEE---EECCGGGCSEEEEEETTSCEE--EEEEETTEE-----------------------------
T ss_pred -----CC--CCcEEEE---EeCCCCCCCEEEEeccCCEEE--EEEcCCCce-----------------------------
Confidence 89 9999999 99877 88999999888888 888776210
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCce-eeEEEEecCCCCEEEE
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLK-LLNVLRGHKKGTQIVS 370 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~l~~ 370 (537)
.. ...+..|...|.+++|+|+ +++|++++.|+.|++||+..... ....+
T Consensus 92 ------------~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----------- 143 (379)
T 3jrp_A 92 ------------SQ-----IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII----------- 143 (379)
T ss_dssp ------------EE-----EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-----------
T ss_pred ------------eE-----eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-----------
Confidence 00 2233467889999999999 99999999999999999983311 11122
Q ss_pred EcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-------------CCCEEEEEeCCCcEE
Q psy10942 371 TGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-------------LDRILISSSGDATIK 437 (537)
Q Consensus 371 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~i~ 437 (537)
..|.. .+.+++|+| ++++|++++.|+.|+
T Consensus 144 ---------------------~~~~~-----------------~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 185 (379)
T 3jrp_A 144 ---------------------DAHAI-----------------GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 185 (379)
T ss_dssp ---------------------ECCTT-----------------CEEEEEECCCC----------CTTCEEEEEETTSCEE
T ss_pred ---------------------cCCCC-----------------ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEE
Confidence 22333 566666666 799999999999999
Q ss_pred EEECCCce----eeeEeecCCcceEEEEEecC---CCEEEEEeCCCcEEEEECCCCe---eEEEe--cCCccceeccCCC
Q psy10942 438 LWCLTDYV----CLKSLEGHDASVLRCHFINK---GTQIVSTGADGLLKLWSIKTST---CVSTF--DKHALKIRNSDSE 505 (537)
Q Consensus 438 i~d~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~dg~v~vwd~~~~~---~~~~~--~~~~~~i~~~~~~ 505 (537)
+||+.+++ ....+.+|...|.+++|+|+ +++|++++.||.|++||+.+++ ....+ ..|...+
T Consensus 186 i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v------ 259 (379)
T 3jrp_A 186 IWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL------ 259 (379)
T ss_dssp EEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE------
T ss_pred EEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcE------
Confidence 99997643 55678889999999999999 8999999999999999998864 22222 3477778
Q ss_pred CCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 506 NDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 506 ~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.++ +|+|++++|++++.||.|++|
T Consensus 260 -----~~~---~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 260 -----WRA---SWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp -----EEE---EECSSSCCEEEEESSSSEEEE
T ss_pred -----EEE---EEcCCCCEEEEecCCCcEEEE
Confidence 888 999999999999999999998
No 115
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.4e-31 Score=257.20 Aligned_cols=279 Identities=15% Similarity=0.109 Sum_probs=215.0
Q ss_pred eEEEEEeccccEEE-EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCc
Q psy10942 99 LVRIVRSSVKRMYA-VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGD 177 (537)
Q Consensus 99 v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (537)
...++++|+...++ +++.||.|+||++..... .......+.+|.+.|.+++|+|.++++|++++.++.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~-------~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~---- 105 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGR-------VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCT---- 105 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE-------CCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSE----
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCC-------CCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCe----
Confidence 44588899886544 468899999999965210 013455678999999999999448888888887777
Q ss_pred ccceeecccCCCcchhhHHHHHHHHHhhhccccc-------cc--ccccccccCCCcCeEEEEeccCcccCC-Ceeeecc
Q psy10942 178 LSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-------QQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQS 247 (537)
Q Consensus 178 i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-------~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~ 247 (537)
| ++||+ .+.. .. +. +| ...|.++ +|+|++ ++|++++
T Consensus 106 v-----------------~vw~~-------~~~~~~~~~~~~~~~~~-----~h--~~~v~~~---~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 106 V-----------------MVWEI-------PDGGLVLPLREPVITLE-----GH--TKRVGIV---AWHPTAQNVLLSAG 151 (402)
T ss_dssp E-----------------EEEEC-------CTTCCSSCBCSCSEEEE-----CC--SSCEEEE---EECSSBTTEEEEEE
T ss_pred E-----------------EEEEc-------cCCCCccccCCceEEec-----CC--CCeEEEE---EECcCCCCEEEEEc
Confidence 9 99998 6552 22 55 89 9999999 999998 6888888
Q ss_pred CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc--cccCCCeEE
Q psy10942 248 MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK--KGHEKDINC 325 (537)
Q Consensus 248 ~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~v~~ 325 (537)
.|+.|+ +|++..+ +. ...+ ..|...|.+
T Consensus 152 ~dg~i~--iwd~~~~-------------------------------------------~~-----~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 152 CDNVIL--VWDVGTG-------------------------------------------AA-----VLTLGPDVHPDTIYS 181 (402)
T ss_dssp TTSCEE--EEETTTT-------------------------------------------EE-----EEEECTTTCCSCEEE
T ss_pred CCCEEE--EEECCCC-------------------------------------------Cc-----cEEEecCCCCCceEE
Confidence 888888 7777652 11 1112 468889999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE-EecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942 326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL-RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404 (537)
Q Consensus 326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 404 (537)
++|+|++++|++++.|+.|++||++ ..+.+..+ ..|.. .
T Consensus 182 ~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~--------------------------------~------- 221 (402)
T 2aq5_A 182 VDWSRDGALICTSCRDKRVRVIEPR-KGTVVAEKDRPHEG--------------------------------T------- 221 (402)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETT-TTEEEEEEECSSCS--------------------------------S-------
T ss_pred EEECCCCCEEEEEecCCcEEEEeCC-CCceeeeeccCCCC--------------------------------C-------
Confidence 9999999999999999999999998 55555444 33322 0
Q ss_pred cCCCceEEeeeeEEEEcCCCCEEEEE---eCCCcEEEEECCCcee-eeEee-cCCcceEEEEEecCCCEEEE-EeCCCcE
Q psy10942 405 KDENQIITGGVWFVNFSPLDRILISS---SGDATIKLWCLTDYVC-LKSLE-GHDASVLRCHFINKGTQIVS-TGADGLL 478 (537)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~s-~~~dg~v 478 (537)
.+.+++|+|++++|++| +.|+.|++||+.+++. +.... .|...+.+++|+|++++|++ ++.||.|
T Consensus 222 ---------~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i 292 (402)
T 2aq5_A 222 ---------RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSI 292 (402)
T ss_dssp ---------SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCE
T ss_pred ---------cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeE
Confidence 37788999999999999 7899999999988654 33333 46778999999999999975 4579999
Q ss_pred EEEECCCCee-EEEecC--CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 479 KLWSIKTSTC-VSTFDK--HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 479 ~vwd~~~~~~-~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
++||+.+++. +..+.. |...+ .++ +|+|++.++++ .|+.+++|
T Consensus 293 ~i~d~~~~~~~~~~l~~~~~~~~v-----------~~~---~~sp~~~~~~s--~~~~~~~~ 338 (402)
T 2aq5_A 293 RYFEITSEAPFLHYLSMFSSKESQ-----------RGM---GYMPKRGLEVN--KCEIARFY 338 (402)
T ss_dssp EEEEECSSTTCEEEEEEECCSSCC-----------SEE---EECCGGGSCGG--GTEEEEEE
T ss_pred EEEEecCCCcceEeecccccCCcc-----------cce---EEeccccccee--cceeEEEE
Confidence 9999998874 445544 44778 888 99999999875 56688887
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-30 Score=249.20 Aligned_cols=236 Identities=14% Similarity=0.115 Sum_probs=163.8
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEEccCCceee-
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--------NDKLLASGSLDKTVKVWSTTGGLKLL- 356 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~d~~i~i~d~~~~~~~~- 356 (537)
.++++++.|++|++||.+++..........+.+|.+.|++++|+| |+++|++++.|++|++||+.......
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 679999999999999999887655444667889999999999998 88999999999999999998433332
Q ss_pred --------EEEEecCCC-CEEEEEcCCCcEEEEECCCCeeeeeeccCCcc----eEEEEEecCCCceE----EeeeeEEE
Q psy10942 357 --------NVLRGHKKG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALK----IWTLAITKDENQII----TGGVWFVN 419 (537)
Q Consensus 357 --------~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~----~~~i~~~~ 419 (537)
..+..++++ .++++++.|++|++||+++++.......+... .......+...... ...+.++.
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 233445555 57999999999999999998776555433222 22222222111111 12577888
Q ss_pred Ec-CCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEE------------------Eec--CCCEEEEEeCCCcE
Q psy10942 420 FS-PLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH------------------FIN--KGTQIVSTGADGLL 478 (537)
Q Consensus 420 ~s-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~------------------~s~--~~~~l~s~~~dg~v 478 (537)
|+ |+++.|++++.|+.+++||+..++....+..|...+..+. |+| ++.++++++.||.|
T Consensus 262 ~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V 341 (393)
T 4gq1_A 262 WIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI 341 (393)
T ss_dssp EETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred eecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence 86 8999999999999999999988777766666655444433 333 34467788899999
Q ss_pred EEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942 479 KLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV 535 (537)
Q Consensus 479 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~ 535 (537)
++||+.+++....+..|..+| .++ +|||||++||+++.||.+.
T Consensus 342 ~lwd~~~~~~~~~~~~~~~~V-----------~sv---afspdG~~LA~as~~Gv~l 384 (393)
T 4gq1_A 342 QLINTYEKDSNSIPIQLGMPI-----------VDF---CWHQDGSHLAIATEGSVLL 384 (393)
T ss_dssp EEEETTCTTCCEEEEECSSCE-----------EEE---EECTTSSEEEEEESSEEEE
T ss_pred EEEECCCCcEEEEecCCCCcE-----------EEE---EEcCCCCEEEEEeCCCeEE
Confidence 999999999998888999999 999 9999999999999888643
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-30 Score=251.75 Aligned_cols=284 Identities=12% Similarity=0.094 Sum_probs=212.1
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-------------------------------
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF------------------------------- 145 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------------------------------- 145 (537)
.++.+++|+|||++|+++ .++.|++||+.+++.. +.+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHW--------EFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKK 75 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEE--------EEEEEEECCC---------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcc--------eeeeecCCccccccccccccchhhccccccccccccc
Confidence 468899999999977665 5688999999885400 011111
Q ss_pred -----------------------ecchhhhhhhhcccCCCccE-EEeeeccccCCcccceeecccCCCcchhhHHHHHHH
Q psy10942 146 -----------------------VGFSDEILDIALLGEEDSHI-VVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERI 201 (537)
Q Consensus 146 -----------------------~~~~~~v~~~~~~~~~~~~l-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~ 201 (537)
.+|.+.|.+++|+ +++++| ++++.++. | ++||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~~dg~----v-----------------~iwd~- 132 (450)
T 2vdu_B 76 LKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLT-SDESRLIACADSDKS----L-----------------LVFDV- 132 (450)
T ss_dssp ------------------------CCCCCEEEEEEC-TTSSEEEEEEGGGTE----E-----------------EEEEE-
T ss_pred cccCcCccccccCccccCCCCCCCccCCceEEEEEc-CCCCEEEEEECCCCe----E-----------------EEEEC-
Confidence 2344479999999 677775 66666666 9 99999
Q ss_pred HHhhhcc--ccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccccccccee
Q psy10942 202 LEAKFKQ--SSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHG 277 (537)
Q Consensus 202 ~~~~~~~--~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~ 277 (537)
. ++... +. ...| ...|.++ +|+|++++|++++.++.+. +|++.......
T Consensus 133 ------~~~~~~~~~~~~---~~~~--~~~v~~~---~~sp~~~~l~~~~~~g~v~--~~~~~~~~~~~----------- 185 (450)
T 2vdu_B 133 ------DKTSKNVLKLRK---RFCF--SKRPNAI---SIAEDDTTVIIADKFGDVY--SIDINSIPEEK----------- 185 (450)
T ss_dssp ------CSSSSSCEEEEE---EEEC--SSCEEEE---EECTTSSEEEEEETTSEEE--EEETTSCCCSS-----------
T ss_pred ------cCCCCceeeeee---cccC--CCCceEE---EEcCCCCEEEEEeCCCcEE--EEecCCccccc-----------
Confidence 6 55544 32 1156 7889999 9999999999999998888 88876631100
Q ss_pred eeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEccCCce
Q psy10942 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN---DKLLASGSLDKTVKVWSTTGGLK 354 (537)
Q Consensus 278 ~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~i~d~~~~~~ 354 (537)
.. ...+.+|...|.+++|+|+ +++|++++.|+.|++||+. ...
T Consensus 186 ----------------------------~~-----~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~-~~~ 231 (450)
T 2vdu_B 186 ----------------------------FT-----QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP-QCF 231 (450)
T ss_dssp ----------------------------CC-----CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES-CTT
T ss_pred ----------------------------cc-----ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC-CCc
Confidence 00 2245678899999999999 9999999999999999998 333
Q ss_pred eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942 355 LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA 434 (537)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (537)
.+..+ +.+|.. .|.+++|+ ++++|++++.|+
T Consensus 232 ~~~~~-------------------------------~~~h~~-----------------~v~~~~~s-d~~~l~s~~~d~ 262 (450)
T 2vdu_B 232 IVDKW-------------------------------LFGHKH-----------------FVSSICCG-KDYLLLSAGGDD 262 (450)
T ss_dssp CEEEE-------------------------------CCCCSS-----------------CEEEEEEC-STTEEEEEESSS
T ss_pred eeeee-------------------------------ecCCCC-----------------ceEEEEEC-CCCEEEEEeCCC
Confidence 33321 112222 78899999 999999999999
Q ss_pred cEEEEECCCceeeeEeecC-------------------------CcceEEEEEecCCCEEEEEe-CCCcEEEEEC--CCC
Q psy10942 435 TIKLWCLTDYVCLKSLEGH-------------------------DASVLRCHFINKGTQIVSTG-ADGLLKLWSI--KTS 486 (537)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~--~~~ 486 (537)
.|++||+.+++++..+..+ ...|.+++|+|++++|++++ .|+.|++|++ .++
T Consensus 263 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 263 KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 9999999999988887632 35689999999999999999 8999999999 666
Q ss_pred ---eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC------CCCEEeC
Q psy10942 487 ---TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW------SPQVVVY 537 (537)
Q Consensus 487 ---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~------dg~i~vW 537 (537)
+.+..+..| ..+ .++ +|+|++.++++++. +..|.+|
T Consensus 343 ~~l~~~~~~~~~-~~v-----------~~~---~~~~~~~~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 343 GDLALKQIITFP-YNV-----------ISL---SAHNDEFQVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp TCEEEEEEEECS-SCE-----------EEE---EEETTEEEEEECCTTCCSSCCCSEEEE
T ss_pred CceeeccEeccC-Cce-----------EEE---EecCCcEEEEEecccCCCCCCcceEEE
Confidence 777788888 778 888 99996433333332 4446665
No 118
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=9.4e-29 Score=265.33 Aligned_cols=425 Identities=9% Similarity=-0.017 Sum_probs=283.6
Q ss_pred eeeeeeeeccCCcceEEEecC------cceEEEEEcCccceeeeecccccc-------ceeeeEeecCccccccCCcEEE
Q psy10942 4 CVTCFDVIPQITSEFSVHCGR------DKVLFTWDLSSRKQLRSYPAYESL-------ETCAVFHLSDETESKSGGKTFV 70 (537)
Q Consensus 4 ~V~~~~~~~~~~~~~l~s~~~------~g~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 70 (537)
.|.+++|| |||++|+.++. +..|.+||+.+++......+...+ ..+ .++| +++++
T Consensus 54 ~v~~~~~S--PDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~--~~Sp--------Dg~ll 121 (1045)
T 1k32_A 54 VINNARFF--PDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVA--GFDP--------DGNLI 121 (1045)
T ss_dssp EEEEEEEC--TTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEE--EECT--------TCCEE
T ss_pred cccCeEEC--CCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccc--cCCC--------CCEEE
Confidence 58899999 89999998854 357999999988744333333333 445 6688 44577
Q ss_pred EEeCcc------ceEEeeeccceehhhhc--------------------------------------------------C
Q psy10942 71 LAGGEK------SLLHYYETSAVKELYQH--------------------------------------------------G 94 (537)
Q Consensus 71 ~~~~~~------~~i~~wd~~~~~~~~~~--------------------------------------------------~ 94 (537)
++++.+ ..|..||+.+++..... .
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 777643 45888888766532111 1
Q ss_pred CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 95 LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 95 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
+.+.+.+++|+++ .++++++.++.+.||.+... ....+.+..|.. +..++|+ ++++.++++ .++.
T Consensus 202 ~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~----------g~~~~~l~~~~~-~~~~~~S-pDG~~la~~-~~~~- 266 (1045)
T 1k32_A 202 MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLD----------GKDLRKHTSFTD-YYPRHLN-TDGRRILFS-KGGS- 266 (1045)
T ss_dssp CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETT----------SCSCEECCCCCS-SCEEEEE-ESSSCEEEE-ETTE-
T ss_pred CCCcccceEEeCC-EEEEEEeccCceEEEEEeCC----------CCcceEecCCCC-cceeeEc-CCCCEEEEE-eCCE-
Confidence 1235667778887 56667777888899987642 233455555553 6677899 788888776 3444
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccc------cccccCCCcCeEEEEeccCcc-cCCCeeeec
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHN------TERLGRDELKTVTLLERGKTV-KEEDLFPRQ 246 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~------~~~~~h~~~~~v~~~~~~~~s-~~~~~l~~~ 246 (537)
| .+|+. ...... +.. .....| ...+.++ +|+ |||++++++
T Consensus 267 ---i-----------------~~~d~-------~~~~l~~l~~~~~~~~~~~~~~--~~~v~~~---~~S~pdG~~la~~ 314 (1045)
T 1k32_A 267 ---I-----------------YIFNP-------DTEKIEKIEIGDLESPEDRIIS--IPSKFAE---DFSPLDGDLIAFV 314 (1045)
T ss_dssp ---E-----------------EEECT-------TTCCEEECCCCCCCBCCSEEEE--CGGGGEE---EEEECGGGCEEEE
T ss_pred ---E-----------------EEecC-------CceEeeeeccCccccccccccc--cccccee---eecCCCCCEEEEE
Confidence 8 77876 333222 220 000124 4568899 999 999999988
Q ss_pred cCCCcceeccccccCCCccccccccc-ccceeeeeeCCcceEEEEEeCCCeEE-EEECCCCceeeeeecccccccCCCeE
Q psy10942 247 SMEPSTLEELEKRKTYHFPLFGIFVP-EAEHGAFYTGGTVELLASGSLDKTVK-VWSTTGGLKLLNVLRGHKKGHEKDIN 324 (537)
Q Consensus 247 ~~d~~i~~~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~d~~i~-i~~~~~~~~~~~~~~~~~~~~~~~v~ 324 (537)
+ ++.+. +|+...+.......... ........ + -..++.++.++.+. +|+..+++. ..+..|...+.
T Consensus 315 ~-~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~~~------~~l~~~~~~~~ 382 (1045)
T 1k32_A 315 S-RGQAF--IQDVSGTYVLKVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTGKA------EKFEENLGNVF 382 (1045)
T ss_dssp E-TTEEE--EECTTSSBEEECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTCCE------EECCCCCCSEE
T ss_pred E-cCEEE--EEcCCCCceEEccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCCCc------eEecCCcccee
Confidence 7 77888 99987643111000000 01111222 1 14677777788888 999987753 12236778899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEE----------EecCCCCEEEEEcCCC----------cEEEEECCC
Q psy10942 325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL----------RGHKKGTQIVSTGADG----------LLKLWSIKT 384 (537)
Q Consensus 325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------~~~~~~~~l~~~~~d~----------~i~i~d~~~ 384 (537)
.++|+|||++|++++.++.|++||+. .++..... ...++++++++++.++ .|++||+.+
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~-tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLE-TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred eeEECCCCCEEEEECCCCeEEEEECC-CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 99999999999999999999999998 44443333 4456788888877644 899999998
Q ss_pred CeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc--------------------
Q psy10942 385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY-------------------- 444 (537)
Q Consensus 385 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-------------------- 444 (537)
++ ...+..+.. .+..++|+|||++|++++.++...+|+....
T Consensus 462 g~-~~~l~~~~~-----------------~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1045)
T 1k32_A 462 RK-IFAATTENS-----------------HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSP 523 (1045)
T ss_dssp TE-EEECSCSSS-----------------BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCC
T ss_pred Cc-EEEeeCCCc-----------------ccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCC
Confidence 87 555555554 4556777888888877777666555543221
Q ss_pred -----------------------eeeeEeecCCcceEEEEEecCCCEEEE-------------EeCCCcEEEEECCCCee
Q psy10942 445 -----------------------VCLKSLEGHDASVLRCHFINKGTQIVS-------------TGADGLLKLWSIKTSTC 488 (537)
Q Consensus 445 -----------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s-------------~~~dg~v~vwd~~~~~~ 488 (537)
..+..+..|.+.+..++++||++++++ ......|.+||+.+++.
T Consensus 524 ~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~ 603 (1045)
T 1k32_A 524 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 603 (1045)
T ss_dssp CGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred CccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE
Confidence 112234446677899999999987875 12345788999988875
Q ss_pred EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.. +. ..+ .++ +|||||+.|++++.| .|++|
T Consensus 604 ~~-l~---~~v-----------~~~---~~S~DG~~l~~~~~~-~i~~~ 633 (1045)
T 1k32_A 604 TE-VK---NNL-----------TDL---RLSADRKTVMVRKDD-GKIYT 633 (1045)
T ss_dssp EE-EE---EEE-----------EEE---EECTTSCEEEEEETT-SCEEE
T ss_pred EE-ee---cCc-----------ceE---EECCCCCEEEEEcCC-cEEEE
Confidence 43 32 456 777 999999999998866 67776
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=247.62 Aligned_cols=349 Identities=12% Similarity=0.075 Sum_probs=221.6
Q ss_pred ceeeeeeeeeccCCcceEEEecCcceEEEEEcCccc---eeeeeccccc-cceeeeEeecCccccccCCcEEEEEeCccc
Q psy10942 2 KFCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRK---QLRSYPAYES-LETCAVFHLSDETESKSGGKTFVLAGGEKS 77 (537)
Q Consensus 2 ~~~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (537)
+.+++|++|+ ++|++|+++ .++.|++||+++|+ .+...+.... .....+...+. ....+.....+.
T Consensus 4 ~~p~~~v~~s--~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 73 (450)
T 2vdu_B 4 IHPLQNLLTS--RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKE-------QQGQSSENENEN 73 (450)
T ss_dssp ECCCCEEEEC--SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred cccEEEEEec--CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchh-------hccccccccccc
Confidence 4578999999 888866666 56789999999999 6555542221 11110000110 111111111111
Q ss_pred eE-E----------eeeccceehhhh-cCCCcceEEEEEeccccEE-EEEeCCceEEEEecc--cccCccccccccccee
Q psy10942 78 LL-H----------YYETSAVKELYQ-HGLSSPLVRIVRSSVKRMY-AVVTADHNISLYRLN--SETGLEERPNKILKFR 142 (537)
Q Consensus 78 ~i-~----------~wd~~~~~~~~~-~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~ 142 (537)
.- + .+... ..... ..+.+.|.+++|+|++++| |+++.|+.|++||+. + ++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~-----------~~~~ 140 (450)
T 2vdu_B 74 KKLKSNKGDSIKRTAAKVP--SPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS-----------KNVL 140 (450)
T ss_dssp ----------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS-----------SSCE
T ss_pred cccccCcCccccccCcccc--CCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC-----------Ccee
Confidence 00 0 00000 00001 1223579999999999996 888899999999998 6 5666
Q ss_pred EEee--cchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccc-ccccc
Q psy10942 143 KQFV--GFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQK-HNTER 219 (537)
Q Consensus 143 ~~~~--~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l-~~~~~ 219 (537)
..+. .|...|.+++|+ +++.+|++++.++. + ++|++ ....... ....+
T Consensus 141 ~~~~~~~~~~~v~~~~~s-p~~~~l~~~~~~g~----v-----------------~~~~~-------~~~~~~~~~~~~~ 191 (450)
T 2vdu_B 141 KLRKRFCFSKRPNAISIA-EDDTTVIIADKFGD----V-----------------YSIDI-------NSIPEEKFTQEPI 191 (450)
T ss_dssp EEEEEEECSSCEEEEEEC-TTSSEEEEEETTSE----E-----------------EEEET-------TSCCCSSCCCCCS
T ss_pred eeeecccCCCCceEEEEc-CCCCEEEEEeCCCc----E-----------------EEEec-------CCcccccccceee
Confidence 6666 556789999999 78888888877666 8 88877 4443321 11122
Q ss_pred ccCCCcCeEEEEeccCcccC---CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942 220 LGRDELKTVTLLERGKTVKE---EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT 296 (537)
Q Consensus 220 ~~h~~~~~v~~~~~~~~s~~---~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~ 296 (537)
.+| ...|.++ +|+|+ +++|++++.|+.|+ +|++..+
T Consensus 192 ~~h--~~~v~~~---~~sp~~~~~~~l~s~~~d~~i~--vwd~~~~---------------------------------- 230 (450)
T 2vdu_B 192 LGH--VSMLTDV---HLIKDSDGHQFIITSDRDEHIK--ISHYPQC---------------------------------- 230 (450)
T ss_dssp EEC--SSCEEEE---EEEECTTSCEEEEEEETTSCEE--EEEESCT----------------------------------
T ss_pred ecc--cCceEEE---EEcCCCCCCcEEEEEcCCCcEE--EEECCCC----------------------------------
Confidence 389 9999999 99999 88888888888888 8877652
Q ss_pred EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc
Q psy10942 297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376 (537)
Q Consensus 297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 376 (537)
... ...+.+|...|.+++|+ ++++|++++.|+.|++||+. ..+.+..+..+.....++
T Consensus 231 ---------~~~----~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~~~~~~~------- 288 (450)
T 2vdu_B 231 ---------FIV----DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK-TGKNLSTFDYNSLIKPYL------- 288 (450)
T ss_dssp ---------TCE----EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT-TCCEEEEEECHHHHGGGC-------
T ss_pred ---------cee----eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC-CCcEeeeecchhhhhhhh-------
Confidence 111 11134688999999999 99999999999999999998 566666665331100000
Q ss_pred EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEEC--CCc---eeeeEe
Q psy10942 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCL--TDY---VCLKSL 450 (537)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~---~~~~~~ 450 (537)
...+..+ ..+.+.........+.+++|+|++++|++++ .++.|++|++ .++ +.+..+
T Consensus 289 --------------~~~~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~ 351 (450)
T 2vdu_B 289 --------------NDQHLAP---PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQII 351 (450)
T ss_dssp --------------CTTSBC-------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEE
T ss_pred --------------hhccccc---ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEe
Confidence 0000000 0000000000011688899999999999999 8999999999 555 777888
Q ss_pred ecCCcceEEEEEecCCCEEEEE-eC------CCcEEEEECC
Q psy10942 451 EGHDASVLRCHFINKGTQIVST-GA------DGLLKLWSIK 484 (537)
Q Consensus 451 ~~~~~~v~~~~~s~~~~~l~s~-~~------dg~v~vwd~~ 484 (537)
..| +.|.+++|+|++ ++++. +. +..|.+|.+.
T Consensus 352 ~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 352 TFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEE
Confidence 888 889999999964 44444 32 4558888764
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=245.46 Aligned_cols=305 Identities=13% Similarity=0.142 Sum_probs=217.7
Q ss_pred EEcCccceeeeec-cccccceeeeEeecCccccccCC--cEEEEEeCccceEEeeeccc-eehh-hhcC-CCcceEEEEE
Q psy10942 31 WDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGG--KTFVLAGGEKSLLHYYETSA-VKEL-YQHG-LSSPLVRIVR 104 (537)
Q Consensus 31 wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~wd~~~-~~~~-~~~~-~~~~v~~~~~ 104 (537)
|+....+.+..+. +.+.+.++ .+.|. + +.++++++.||.|++||+.+ ++.+ ..+. +.+.|.+++|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~--~~~~~-------~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~ 94 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCL--SFSPP-------TLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW 94 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEE--EECCT-------TSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE
T ss_pred CCCCCcceeEeccCCCCceEEE--EEcCC-------CCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE
Confidence 4455566666554 66778888 56883 3 69999999999999999987 5444 4444 4479999999
Q ss_pred eccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc--ccCCCccEEEeeeccccCCccccee
Q psy10942 105 SSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL--LGEEDSHIVVASNEYLNGGDLSGLV 182 (537)
Q Consensus 105 s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~~~i~~~~ 182 (537)
+|++++|++++.|+.|++||+.+ .+... +.+|...|.+++| + +++.++++++.++. |
T Consensus 95 ~~~~~~l~s~~~dg~v~iwd~~~-----------~~~~~-~~~~~~~v~~~~~~~~-~~~~~l~~~~~dg~----i---- 153 (368)
T 3mmy_A 95 SDDGSKVFTASCDKTAKMWDLSS-----------NQAIQ-IAQHDAPVKTIHWIKA-PNYSCVMTGSWDKT----L---- 153 (368)
T ss_dssp CTTSSEEEEEETTSEEEEEETTT-----------TEEEE-EEECSSCEEEEEEEEC-SSCEEEEEEETTSE----E----
T ss_pred CcCCCEEEEEcCCCcEEEEEcCC-----------CCcee-eccccCceEEEEEEeC-CCCCEEEEccCCCc----E----
Confidence 99999999999999999999998 45443 6679999999999 6 67777888887777 9
Q ss_pred ecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccccc
Q psy10942 183 KLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRK 260 (537)
Q Consensus 183 ~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~ 260 (537)
++||+ ++++.. +. .+ ..+.++ .+. ...+++++.++.+. +|++.
T Consensus 154 -------------~vwd~-------~~~~~~~~~~-----~~---~~~~~~---~~~--~~~~~~~~~~~~i~--~~~~~ 198 (368)
T 3mmy_A 154 -------------KFWDT-------RSSNPMMVLQ-----LP---ERCYCA---DVI--YPMAVVATAERGLI--VYQLE 198 (368)
T ss_dssp -------------EEECS-------SCSSCSEEEE-----CS---SCEEEE---EEE--TTEEEEEEGGGCEE--EEECS
T ss_pred -------------EEEEC-------CCCcEEEEEe-----cC---CCceEE---Eec--CCeeEEEeCCCcEE--EEEec
Confidence 99999 766655 33 34 344454 333 33555556666666 66655
Q ss_pred CCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE----EE
Q psy10942 261 TYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL----LA 336 (537)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~----l~ 336 (537)
. ....... . ...+...+.++.+.++... ++
T Consensus 199 ~-------------------------------------------~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 199 N-------------------------------------------QPSEFRR-I--ESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp S-------------------------------------------SCEEEEE-C--CCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred c-------------------------------------------ccchhhh-c--cccccCCCceEEEcccCCCCCCeEE
Confidence 4 2221111 1 1122334556666554443 89
Q ss_pred EEeCCCcEEEEEccCCc--eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942 337 SGSLDKTVKVWSTTGGL--KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414 (537)
Q Consensus 337 ~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 414 (537)
+++.|+.|++|++.... .....+..|..... ......| ...
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~-----------------~~~ 275 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT--------------------NTSAPQD-----------------IYA 275 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC------------------------CCCEE-----------------ECC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccc--------------------ccccccc-----------------ccc
Confidence 99999999999998321 33444444432000 0000011 116
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI 483 (537)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~ 483 (537)
+.+++|+|++++|++++.||.|++||+.+++++..+.+|...|++++|+|++++|++++.|+..+.|++
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999876555543
No 121
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.2e-29 Score=248.81 Aligned_cols=332 Identities=12% Similarity=0.084 Sum_probs=239.8
Q ss_pred eeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec--cc
Q psy10942 9 DVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET--SA 86 (537)
Q Consensus 9 ~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~--~~ 86 (537)
.|+ +++.++++++.+++|.+||.++++.+.+++....+..+ .++| +++++++++.++.|++||+ .+
T Consensus 144 ~~~--p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v--~~sp--------dg~~l~v~~~d~~V~v~D~~~~t 211 (543)
T 1nir_A 144 DLD--LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHIS--RMSA--------SGRYLLVIGRDARIDMIDLWAKE 211 (543)
T ss_dssp CCC--GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEE--EECT--------TSCEEEEEETTSEEEEEETTSSS
T ss_pred ccC--CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceE--EECC--------CCCEEEEECCCCeEEEEECcCCC
Confidence 466 68889999999999999999999999998855555545 5688 7789999999999999999 88
Q ss_pred eehhhhcCCCcceEEEEEec----cccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecc----------hh-
Q psy10942 87 VKELYQHGLSSPLVRIVRSS----VKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGF----------SD- 150 (537)
Q Consensus 87 ~~~~~~~~~~~~v~~~~~s~----~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----------~~- 150 (537)
++.+.++.....+..++|+| ||++|++++. +++|.+||..+ +++++++..+ ..
T Consensus 212 ~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-----------~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 212 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-----------LEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-----------CCEEEEEECCEECSSSCCEESCC
T ss_pred CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-----------cccceeecccCcccCccccccCC
Confidence 98888888777899999999 9999999885 89999999988 6777777642 22
Q ss_pred hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEE
Q psy10942 151 EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVT 229 (537)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~ 229 (537)
.+.++.++|.+...++....+ +.| .+||. .+.+.. .. ...+ ...+.
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~----g~i-----------------~vvd~-------~~~~~l~~~---~i~~--~~~~~ 327 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKET----GKV-----------------LLVNY-------KDIDNLTVT---SIGA--APFLH 327 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTT----TEE-----------------EEEEC-------TTSSSCEEE---EEEC--CSSCC
T ss_pred ceEEEEECCCCCEEEEEECCC----CeE-----------------EEEEe-------cCCCcceeE---Eecc--CcCcc
Confidence 577889994343333333333 448 88887 544332 11 0134 45677
Q ss_pred EEeccCcccCCCeeeec-cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee
Q psy10942 230 LLERGKTVKEEDLFPRQ-SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL 308 (537)
Q Consensus 230 ~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~ 308 (537)
.+ .|+|+|++++++ ..++.|. +||..++ +..
T Consensus 328 ~~---~~spdg~~l~va~~~~~~v~--v~D~~tg-------------------------------------------~l~ 359 (543)
T 1nir_A 328 DG---GWDSSHRYFMTAANNSNKVA--VIDSKDR-------------------------------------------RLS 359 (543)
T ss_dssp CE---EECTTSCEEEEEEGGGTEEE--EEETTTT-------------------------------------------EEE
T ss_pred Cc---eECCCCCEEEEEecCCCeEE--EEECCCC-------------------------------------------eEE
Confidence 78 899999876644 4466677 6666652 211
Q ss_pred eeeecccccccCCCeEEEEEcCC-CCEEEEEe-CCCcEEEEEccCC------ceeeEEEEecCCCCEEEEEcCCCcEEEE
Q psy10942 309 LNVLRGHKKGHEKDINCVTVSPN-DKLLASGS-LDKTVKVWSTTGG------LKLLNVLRGHKKGTQIVSTGADGLLKLW 380 (537)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~-~d~~i~i~d~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 380 (537)
..+ ......|.+....+ ++|+ +..++++. .|++|.+||+... .+.++.+..+..
T Consensus 360 ~~i-~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~---------------- 421 (543)
T 1nir_A 360 ALV-DVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG---------------- 421 (543)
T ss_dssp EEE-ECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS----------------
T ss_pred Eee-ccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC----------------
Confidence 111 00111344333333 4677 55666665 5789999998831 444444444432
Q ss_pred ECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-------CCCcEEEEECCCceee-eEe--
Q psy10942 381 SIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-------GDATIKLWCLTDYVCL-KSL-- 450 (537)
Q Consensus 381 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~-~~~-- 450 (537)
++..++++|++++|++++ .+++|.+||+.+++.. ..+
T Consensus 422 ---------------------------------~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v 468 (543)
T 1nir_A 422 ---------------------------------GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI 468 (543)
T ss_dssp ---------------------------------CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred ---------------------------------CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeec
Confidence 567788999999999987 2679999999998776 333
Q ss_pred ------ecCCcceEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeeEEEecCC
Q psy10942 451 ------EGHDASVLRCHFINKGTQIVSTG-----ADGLLKLWSIKTSTCVSTFDKH 495 (537)
Q Consensus 451 ------~~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~vwd~~~~~~~~~~~~~ 495 (537)
..+...+..+.|+|+|+.|+++. .|+.|.|||..+++++.+++.+
T Consensus 469 ~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 469 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp HHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred hhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 34567899999999999998763 4799999999999999988753
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1e-29 Score=239.07 Aligned_cols=293 Identities=11% Similarity=0.065 Sum_probs=193.6
Q ss_pred eeeccceehhhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc
Q psy10942 81 YYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG 159 (537)
Q Consensus 81 ~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 159 (537)
+|++.+.+.+.....| +.|.+++|+|||++||+|+.++ +++||..+ .+.......+ .+..+++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~-----------~~~~~~~~~~--~~~~~~~~- 67 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP-----------VAHIMSQEMR--HLSKVRML- 67 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETT-----------EEEEEEEECS--CCCEEEEC-
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCC-----------cceeeeeecC--CeEEEEEc-
Confidence 4566666666555544 6999999999999999998775 78999887 4444333322 36677777
Q ss_pred CCCccEE-EeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc
Q psy10942 160 EEDSHIV-VASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV 237 (537)
Q Consensus 160 ~~~~~l~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s 237 (537)
++.+.++ +++.++. | ++||. .+++.. .. .+ ...|.++ +++
T Consensus 68 ~~~~~~~~~~~~d~~----v-----------------~iWd~-------~~~~~~~~~-----~~--~~~v~~v---~~~ 109 (355)
T 3vu4_A 68 HRTNYVAFVTGVKEV----V-----------------HIWDD-------VKKQDVSRI-----KV--DAPVKDL---FLS 109 (355)
T ss_dssp TTSSEEEEECSSTTE----E-----------------EEEET-------TTTEEEEEE-----EC--SSCEEEE---EEC
T ss_pred CCCCEEEEEECCccE----E-----------------EEEEC-------CCCcEEEEE-----EC--CCceEEE---EEc
Confidence 4455554 4444444 9 99999 877776 22 45 6789999 998
Q ss_pred cCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE--EeCCCeEEEEECCCCceeee-----
Q psy10942 238 KEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS--GSLDKTVKVWSTTGGLKLLN----- 310 (537)
Q Consensus 238 ~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~d~~i~i~~~~~~~~~~~----- 310 (537)
++. ++.+ .++.++ +|++......... +..+....... . ..++. |+.+|.|++||+.++.....
T Consensus 110 ~~~--~~~~-~~~~i~--i~d~~~~~~~~~~-~~~~~~~~~~s--~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 110 REF--IVVS-YGDVIS--VFKFGNPWKRITD-DIRFGGVCEFS--N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp SSE--EEEE-ETTEEE--EEESSTTCCBSSC-CEEEEEEEEEE--T--TEEEEEESSCTTCEEEEECCC-----------
T ss_pred CCE--EEEE-EcCEEE--EEECCCCceeeEE-eccCCceEEEE--c--cEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 875 3333 367899 9999875111111 00000000000 1 34444 68999999999987641100
Q ss_pred -----ee-cccccccCCCeEEEEEcCCCCEEEEEeCCCc-EEEEEccCCceeeEEEE-e-cCCCCEEEEEcCCCcEEEEE
Q psy10942 311 -----VL-RGHKKGHEKDINCVTVSPNDKLLASGSLDKT-VKVWSTTGGLKLLNVLR-G-HKKGTQIVSTGADGLLKLWS 381 (537)
Q Consensus 311 -----~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~-~-~~~~~~l~~~~~d~~i~i~d 381 (537)
.. ...+.+|...|.+++|+|++++|++++.|++ |++||+. ..+.+..+. + |..
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~-~~~~~~~~~~g~h~~----------------- 241 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE-DGVLVREFRRGLDRA----------------- 241 (355)
T ss_dssp -------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT-TCCEEEEEECTTCCS-----------------
T ss_pred cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEEEEcCCCCC-----------------
Confidence 00 2346789999999999999999999999998 9999998 555555554 2 333
Q ss_pred CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEee--------
Q psy10942 382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLE-------- 451 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~-------- 451 (537)
.|.+++|+|++++|++++.|+.|++||+..+.. ...+.
T Consensus 242 --------------------------------~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T 3vu4_A 242 --------------------------------DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYF 289 (355)
T ss_dssp --------------------------------CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCC
T ss_pred --------------------------------cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccc
Confidence 889999999999999999999999999976421 11110
Q ss_pred -------------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 452 -------------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 452 -------------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
.+......++|++++++|++++.||.+++|++..+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 290 QSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 11223467999999999999999999999997543
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=9.6e-29 Score=220.81 Aligned_cols=287 Identities=11% Similarity=0.024 Sum_probs=190.0
Q ss_pred eEEEecCcceEEEEEcCcc---ceeeeecccc-ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942 18 FSVHCGRDKVLFTWDLSSR---KQLRSYPAYE-SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH 93 (537)
Q Consensus 18 ~l~s~~~~g~v~iwd~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 93 (537)
.++++++.. |++|+..++ +++++....+ ++..+ +++|+. .+.+.++.| +++.
T Consensus 56 ~~~~~~~~~-v~lw~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~------~~~~~~~~~--------~~~~------- 111 (356)
T 2w18_A 56 CIITACEDV-VSLWKALDAWQWEKLYTWHFAEVPVLQI--VPVPDV------YNLVCVALG--------NLEI------- 111 (356)
T ss_dssp EEEEEESSE-EEEEEESSSSBEEEEEEEECCSSCEEEE--CCCTTC------CSCEEEEEC--------SSSE-------
T ss_pred EEEEeccce-EEEcccCCCccceeeEEEeccCceeEEE--EEcCcc------cceeeeeec--------cccc-------
Confidence 677777655 999999998 7777776433 56666 678841 112222222 1111
Q ss_pred CCCcceEEEEEecc----ccEEEEEeCCceEEEEecccccCcccccccccceeEE-eecchhhhhhhhcccCCCccEEEe
Q psy10942 94 GLSSPLVRIVRSSV----KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ-FVGFSDEILDIALLGEEDSHIVVA 168 (537)
Q Consensus 94 ~~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~ 168 (537)
..|.+++|+|| +++++.++.+ +.+|++.+ ++++.. ..+|...|..++|+ ++++.+..
T Consensus 112 ---~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~-----------g~lv~ss~~g~d~~V~~~~~s-~dG~~~~s- 173 (356)
T 2w18_A 112 ---REIRALFCSSDDESEKQVLLKSGNI--KAVLGLTK-----------RRLVSSSGTLSDQQVEVMTFA-EDGGGKEN- 173 (356)
T ss_dssp ---EEEEEECC------CCEEEEEEEEE--EEEEEETT-----------TEEEEEESSSTTCEEEEEEEC-TTSCEEEE-
T ss_pred ---cceEEEEECCCccccccEEEeCCCe--EEEEecCC-----------CcEEEecccCCCCcEEEEEEC-CCCceeee-
Confidence 46999999999 9999998754 88899977 566666 57888889888888 55554431
Q ss_pred eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCccc---CCCeeee
Q psy10942 169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVK---EEDLFPR 245 (537)
Q Consensus 169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~---~~~~l~~ 245 (537)
+ . +| ...+..+ +|+| ++.+|++
T Consensus 174 ---------~------------------------------------~-----~~--~~~v~~l---~fs~~~g~~~~LaS 198 (356)
T 2w18_A 174 ---------Q------------------------------------F-----LM--PPEETIL---TFAEVQGMQEALLG 198 (356)
T ss_dssp ---------E------------------------------------E-----EC--CCSSCEE---EEEEEETSTTEEEE
T ss_pred ---------e------------------------------------c-----cC--CCceeeE---EeeccCCCCceEEE
Confidence 1 1 56 6667777 7888 6688888
Q ss_pred ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC 325 (537)
Q Consensus 246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~ 325 (537)
++.|++|+ +||+.+++ + ++.+.. . ..+...+.+
T Consensus 199 gS~D~TIk--IWDl~TGk----~----------------------------l~tL~g--~-----------~~~v~~v~~ 231 (356)
T 2w18_A 199 TTIMNNIV--IWNLKTGQ----L----------------------------LKKMHI--D-----------DSYQASVCH 231 (356)
T ss_dssp EETTSEEE--EEETTTCC----E----------------------------EEEEEC--C-----------C---CCCEE
T ss_pred ecCCCcEE--EEECCCCc----E----------------------------EEEEcC--C-----------CcceeeeEE
Confidence 88888888 77777631 1 111110 0 012246788
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942 326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405 (537)
Q Consensus 326 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 405 (537)
++|+|+|+++++++.+.. +| .+++++.|+++++||..+++.+..+. +.+ |
T Consensus 232 vafSpdG~~lvs~s~~~~--~w-------------------~laSGs~D~tIklWd~~tgk~l~v~~--------~~~-p 281 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCA--KE-------------------SESLRSPVFQLIVINPKTTLSVGVML--------YCL-P 281 (356)
T ss_dssp EEEEETTEEEEEEC---------------------------------CCEEEEEEETTTTEEEEEEE--------ECC-C
T ss_pred EEECCCCCEEEEeccCCC--cc-------------------eeeccCCCcEEEEEECCCCEEEEEEE--------eec-c
Confidence 999999999988876432 23 35678889999999999988775431 111 2
Q ss_pred CCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceE-EEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942 406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVL-RCHFINKGTQIVSTGADGLLKLWSI 483 (537)
Q Consensus 406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~v~vwd~ 483 (537)
++... .+. ..+.++.++++++.|++|+|||+.+++++.++++|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 282 ~Gh~~---~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 282 PGQAG---RFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTCCC---CEE--EEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcc---eeE--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 22110 122 2233378899999999999999999999999999987665 5899999999999999999999995
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.3e-29 Score=241.59 Aligned_cols=264 Identities=18% Similarity=0.279 Sum_probs=201.4
Q ss_pred cCCCcceEEEEEecc-ccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec
Q psy10942 93 HGLSSPLVRIVRSSV-KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE 171 (537)
Q Consensus 93 ~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~ 171 (537)
+.+.+.|.+++|+|+ +.+||+++.||.|++||+....... .+.........+.+|...|.+++|+|.+...|++++.+
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP-EPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC-CTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc-CccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 344479999999997 7899999999999999998621110 01111456778899999999999994444378777777
Q ss_pred cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCccc-CCCeeeec
Q psy10942 172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKTVK-EEDLFPRQ 246 (537)
Q Consensus 172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~s~-~~~~l~~~ 246 (537)
+. | ++|++ ...... -....+.+| ...|.++ +|+| ++.+|+++
T Consensus 204 g~----i-----------------~vwd~-------~~~~~~~~~~~~~~~~~~h--~~~v~~v---~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 204 HT----I-----------------CLWDI-------NATPKEHRVIDAKNIFTGH--TAVVEDV---AWHLLHESLFGSV 250 (430)
T ss_dssp SC----E-----------------EEEET-------TSCCBGGGEEECSEEECCC--SSCEEEE---EECSSCTTEEEEE
T ss_pred Ce----E-----------------EEEeC-------CCCCCCCceeccceeecCC--CCCEeee---EEeCCCCCEEEEE
Confidence 66 9 99998 542211 111223389 9999999 9999 56777888
Q ss_pred cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV 326 (537)
Q Consensus 247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (537)
+.|+.|+ +|++..... ... ...+..|...|+++
T Consensus 251 ~~dg~i~--i~d~~~~~~----------------------------------------~~~-----~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 251 ADDQKLM--IWDTRNNNT----------------------------------------SKP-----SHTVDAHTAEVNCL 283 (430)
T ss_dssp ETTSEEE--EEETTCSCS----------------------------------------SSC-----SEEEECCSSCEEEE
T ss_pred eCCCeEE--EEECCCCCC----------------------------------------Ccc-----eeEeecCCCCeEEE
Confidence 8888888 887765210 011 22234688899999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942 327 TVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405 (537)
Q Consensus 327 ~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 405 (537)
+|+|+++ +|++++.||.|++||++....++..+..|..
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~----------------------------------------- 322 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD----------------------------------------- 322 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS-----------------------------------------
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC-----------------------------------------
Confidence 9999887 7889999999999999844555555554433
Q ss_pred CCCceEEeeeeEEEEcCCCC-EEEEEeCCCcEEEEECCC--------------ceeeeEeecCCcceEEEEEecCCC-EE
Q psy10942 406 DENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCLTD--------------YVCLKSLEGHDASVLRCHFINKGT-QI 469 (537)
Q Consensus 406 ~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~-~l 469 (537)
.|.+++|+|+++ +|++++.|+.|++||+.. .+.+..+.+|...|++++|+|+++ +|
T Consensus 323 --------~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 323 --------EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWII 394 (430)
T ss_dssp --------CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEE
T ss_pred --------CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEE
Confidence 788899999884 799999999999999987 366778888999999999999999 99
Q ss_pred EEEeCCCcEEEEECCCC
Q psy10942 470 VSTGADGLLKLWSIKTS 486 (537)
Q Consensus 470 ~s~~~dg~v~vwd~~~~ 486 (537)
++++.||.|++|++...
T Consensus 395 ~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 395 CSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEETTSEEEEEEECHH
T ss_pred EEEECCCCEEEeEcccc
Confidence 99999999999998653
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.8e-30 Score=240.68 Aligned_cols=273 Identities=9% Similarity=-0.027 Sum_probs=193.9
Q ss_pred EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCccccee
Q psy10942 103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLV 182 (537)
Q Consensus 103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~ 182 (537)
.+.+++.+|++|+.|+.|++||+.+ ++.+..+. ...|.++.|+| . +++++.++. +
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~-----------~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~----i---- 97 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKD-----------SKTITTIT--TPNPRTGGEHP-A---IISRGPCNR----L---- 97 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESS-----------SSCEEEEE--EECCCTTCCCC-S---EEEECSTTE----E----
T ss_pred hhcCCCCEEEEECCCCcEEEEECCC-----------CcEEEEEe--cCCceeeeeCC-c---eEEecCCCe----E----
Confidence 4457899999999999999999998 56666665 46689999994 3 777777766 8
Q ss_pred ecccCCCcchhhHHHHHHHHHhh--hcccccccccccccccCCCcCeEEEEeccCccc--CCCeeeeccCCCcceecccc
Q psy10942 183 KLGANRSHNEWFDKTFERILEAK--FKQSSSQQKHNTERLGRDELKTVTLLERGKTVK--EEDLFPRQSMEPSTLEELEK 258 (537)
Q Consensus 183 ~~~~~~~~~~~~~~~wd~~~~~~--~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~--~~~~l~~~~~d~~i~~~iw~ 258 (537)
++|+...... ...+.+.. . ....+| ...|.++ +|+| +++++++++.|+.++ +|+
T Consensus 98 -------------~~w~~~~~~~~~~~~~~~~~-~-~~~~~~--~~~v~~~---~~~~~~~~~~l~s~s~dg~i~--~wd 155 (343)
T 3lrv_A 98 -------------LLLYPGNQITILDSKTNKVL-R-EIEVDS--ANEIIYM---YGHNEVNTEYFIWADNRGTIG--FQS 155 (343)
T ss_dssp -------------EEEETTTEEEEEETTTCCEE-E-EEECCC--SSCEEEE---ECCC---CCEEEEEETTCCEE--EEE
T ss_pred -------------EEEEccCceEEeecCCccee-E-EeecCC--CCCEEEE---EcCCCCCCCEEEEEeCCCcEE--EEE
Confidence 8887600000 00122211 1 111256 6889999 9999 999999999999888 888
Q ss_pred ccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE
Q psy10942 259 RKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG 338 (537)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 338 (537)
+..+. .+.+. ...|...|.+++|+|++++|++|
T Consensus 156 ~~~~~--------------------------------~~~~~---------------~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 156 YEDDS--------------------------------QYIVH---------------SAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp SSSSC--------------------------------EEEEE---------------CCCSSCCCCEEEECTTSCEEEEE
T ss_pred CCCCc--------------------------------EEEEE---------------ecCCCCceEEEEECCCCCEEEEE
Confidence 87631 01110 12344568999999999999999
Q ss_pred eCCCcEEEEEccCCceeeEEEEe-cCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE
Q psy10942 339 SLDKTVKVWSTTGGLKLLNVLRG-HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF 417 (537)
Q Consensus 339 ~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 417 (537)
+.||.|++||++........+.. |.. .|.+
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~-------------------------------------------------~v~~ 219 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEA-------------------------------------------------KIKE 219 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTS-------------------------------------------------CEEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCC-------------------------------------------------CEEE
Confidence 99999999999833222133333 322 8899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec---CCcceE--EEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEE
Q psy10942 418 VNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG---HDASVL--RCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVST 491 (537)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~--~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~ 491 (537)
++|+|++.+|++++. +.|++||+++++.+..+.. |...+. +++|+|++++|++++. |+.+++|++.+......
T Consensus 220 l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 220 VKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp EEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred EEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 999999999999994 5999999999877655543 444444 6999999999999998 99999999976543333
Q ss_pred ecCCccceeccCCCCCCccccccceeeec---CCCEEEEEeCCCCEEeC
Q psy10942 492 FDKHALKIRNSDSENDHKGFGLPRQLCSR---NSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~s~---~~~~l~s~~~dg~i~vW 537 (537)
. .++ ..+ .|++ +.+.|++++.||.++++
T Consensus 299 ~----~~~-----------~~~---~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 299 K----DEE-----------SAL---CLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp E----EEE-----------EEC---CC----CCCCEEEEEEETTEEEEE
T ss_pred e----cCc-----------eeE---ecCccccccceeEEEecCCceEEE
Confidence 2 345 566 8888 88899999989888764
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-30 Score=267.66 Aligned_cols=249 Identities=17% Similarity=0.224 Sum_probs=198.4
Q ss_pred CcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCC-CccEEEeeecccc
Q psy10942 96 SSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEE-DSHIVVASNEYLN 174 (537)
Q Consensus 96 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~~~~~ 174 (537)
.+.|.+++|+|++++|++|+.||.|++||+.++. ......+.+|.+.|.+++|+|+. ++.+++++.++.
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~---------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~- 78 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK- 78 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE---------EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC-
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCCCC---------CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe-
Confidence 3689999999999999999999999999998411 57778899999999999999432 778888887777
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccc--cc--ccccccccCCCcCeEEEEeccCcccC--CCeeeeccC
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS--QQ--KHNTERLGRDELKTVTLLERGKTVKE--EDLFPRQSM 248 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~--l~~~~~~~h~~~~~v~~~~~~~~s~~--~~~l~~~~~ 248 (537)
| ++||+ .+++ .. +. +| ...|.++ +|+|+ ++++++++.
T Consensus 79 ---I-----------------~vwd~-------~~~~~~~~~~~~-----~h--~~~V~~v---~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 79 ---V-----------------LIWKE-------ENGRWSQIAVHA-----VH--SASVNSV---QWAPHEYGPLLLVASS 121 (753)
T ss_dssp ---E-----------------EEEEE-------ETTEEEEEEEEC-----CC--SSCEEEE---EECCGGGCSEEEEEET
T ss_pred ---E-----------------EEEEC-------CCCccccccccc-----CC--CCCeEEE---EECCCCCCCEEEEEeC
Confidence 9 99999 7664 22 55 89 9999999 99999 889999999
Q ss_pred CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942 249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV 328 (537)
Q Consensus 249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 328 (537)
||.|+ +|++...... . ......|...|.+++|
T Consensus 122 dg~I~--vwdl~~~~~~-----------------------------------------~-----~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 122 DGKVS--VVEFKENGTT-----------------------------------------S-----PIIIDAHAIGVNSASW 153 (753)
T ss_dssp TSEEE--EEECCSSSCC-----------------------------------------C-----CEEEECCSSCEEEEEE
T ss_pred CCcEE--EEEeecCCCc-----------------------------------------c-----eeEeecCCCceEEEEe
Confidence 88888 8888763100 0 1123467888999999
Q ss_pred cC-------------CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942 329 SP-------------NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395 (537)
Q Consensus 329 s~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 395 (537)
+| +++++++++.||.|++||++...... .....+..|.
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-----------------------------~~~~~~~~h~ 204 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------VLESTLEGHS 204 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE-----------------------------EEEEEECCCS
T ss_pred cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc-----------------------------eeeeeecCCC
Confidence 99 47888888888888888887322110 1122233333
Q ss_pred cceEEEEEecCCCceEEeeeeEEEEcCC---CCEEEEEeCCCcEEEEECCCce-----eeeEeecCCcceEEEEEecCCC
Q psy10942 396 LKIWTLAITKDENQIITGGVWFVNFSPL---DRILISSSGDATIKLWCLTDYV-----CLKSLEGHDASVLRCHFINKGT 467 (537)
Q Consensus 396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~v~~~~~s~~~~ 467 (537)
. .|.+++|+|+ +++|++++.||.|++||+.+++ .......|...|++++|+|+++
T Consensus 205 ~-----------------~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 267 (753)
T 3jro_A 205 D-----------------WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (753)
T ss_dssp S-----------------CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC
T ss_pred C-----------------cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC
Confidence 3 7888999999 8999999999999999998864 3444456888999999999999
Q ss_pred EEEEEeCCCcEEEEECCC
Q psy10942 468 QIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 468 ~l~s~~~dg~v~vwd~~~ 485 (537)
+|++++.||.|++|++..
T Consensus 268 ~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 268 VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CEEEECSSSCEECCBCCS
T ss_pred EEEEEcCCCEEEEEecCC
Confidence 999999999999999874
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.1e-29 Score=256.10 Aligned_cols=247 Identities=16% Similarity=0.155 Sum_probs=191.1
Q ss_pred ccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942 220 LGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV 299 (537)
Q Consensus 220 ~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i 299 (537)
.+| .+.|.++ +|+|++++|++|+.||.|+ +|++..+.
T Consensus 6 ~gH--~~~V~~l---~~s~dg~~latg~~dg~I~--vwd~~~~~------------------------------------ 42 (753)
T 3jro_A 6 NAH--NELIHDA---VLDYYGKRLATCSSDKTIK--IFEVEGET------------------------------------ 42 (753)
T ss_dssp --C--CCCEEEE---CCCSSSCCEEEEETTTEEE--EEEEETTE------------------------------------
T ss_pred ccC--cceeEEE---EECCCCCeEEEEECCCcEE--EEecCCCC------------------------------------
Confidence 399 9999999 9999999999999999999 99876421
Q ss_pred EECCCCceeeeeecccccccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCc-----------eeeEEEEecCC--
Q psy10942 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN--DKLLASGSLDKTVKVWSTTGGL-----------KLLNVLRGHKK-- 364 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~-- 364 (537)
... ...+.+|..+|.+++|+|+ +++|++++.||.|++||+.... ..+..+..+++
T Consensus 43 -----~~~-----~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 112 (753)
T 3jro_A 43 -----HKL-----IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 112 (753)
T ss_dssp -----EEE-----EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred -----Ccc-----ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC
Confidence 000 2234578899999999988 9999999999999999998432 12344555666
Q ss_pred CCEEEEEcCCCcEEEEECCCCe--eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy10942 365 GTQIVSTGADGLLKLWSIKTST--CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT 442 (537)
Q Consensus 365 ~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (537)
+..+++++.||.|++||++++. ....+..|...+.++.++|.... ........++++++++|+.||.|++||+.
T Consensus 113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~----~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE----EDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------------CGGGCCEEEEETTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc----cccccccCCCCCEEEEEECCCeEEEEecc
Confidence 8899999999999999998873 33445566664444444442110 00011112368999999999999999998
Q ss_pred Cc----eeeeEeecCCcceEEEEEecC---CCEEEEEeCCCcEEEEECCCCe-----eEEEecCCccceeccCCCCCCcc
Q psy10942 443 DY----VCLKSLEGHDASVLRCHFINK---GTQIVSTGADGLLKLWSIKTST-----CVSTFDKHALKIRNSDSENDHKG 510 (537)
Q Consensus 443 ~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~dg~v~vwd~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~ 510 (537)
++ .....+.+|...|++++|+|+ +++|++++.||.|++||+.+++ .......|...+
T Consensus 189 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v----------- 257 (753)
T 3jro_A 189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL----------- 257 (753)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC-----------
T ss_pred CCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce-----------
Confidence 76 667788899999999999999 8999999999999999998864 233334577777
Q ss_pred ccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 511 FGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 511 ~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
+++ +|+|+|++|++++.||.|++|
T Consensus 258 ~~l---~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 258 WRA---SWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CCE---EECTTTCCEEEECSSSCEECC
T ss_pred EEE---EEcCCCCEEEEEcCCCEEEEE
Confidence 888 999999999999999999999
No 128
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1e-29 Score=242.73 Aligned_cols=285 Identities=9% Similarity=-0.032 Sum_probs=180.6
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc-------CCCccEEEee
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG-------EEDSHIVVAS 169 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~l~~~~ 169 (537)
.......+++++.+||+++.|++|+|||..++.. ........+.+|.+.|.+++|+| .++++|++++
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~------~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI------ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEE------EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc------ceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 3455566788999999999999999999988311 00123445789999999999984 2678888888
Q ss_pred eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC-Ceeeec
Q psy10942 170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE-DLFPRQ 246 (537)
Q Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~ 246 (537)
.|+. | ++||+ .+.... +. +| ..+|.++ +|+|++ .+|+++
T Consensus 164 ~D~t----v-----------------~~Wd~-------~~~~~~~~~~-----~~--~~~v~~v---~~~p~~~~~l~~~ 205 (393)
T 4gq1_A 164 DDCT----L-----------------IIWRL-------TDEGPILAGY-----PL--SSPGISV---QFRPSNPNQLIVG 205 (393)
T ss_dssp TTSE----E-----------------EEEEE-------ETTEEEEEEE-----EC--SSCEEEE---EEETTEEEEEEEE
T ss_pred CCCe----E-----------------EEEEC-------CCCceeeeec-----CC--CCCcEEE---EECCCCCceEEec
Confidence 8877 9 99999 766555 56 78 8999999 999987 489999
Q ss_pred cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV 326 (537)
Q Consensus 247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (537)
+.|++|+ +||+..+...... ..+.... .+..+ -++...... .....+|...+.++
T Consensus 206 ~~d~~v~--~wd~~t~~~~~~~---------~~~~~~~--------~~~~~-s~~~~~~~~-----~~~~~~~~~~v~~v 260 (393)
T 4gq1_A 206 ERNGNIR--IFDWTLNLSAEEN---------SQTELVK--------NPWLL-TLNTLPLVN-----TCHSSGIASSLANV 260 (393)
T ss_dssp ETTSEEE--EEETTCCC-------------------CS--------CCCSE-EEESGGGC-----------CCSSSCSEE
T ss_pred CCCCEEE--EEECCCCcccccc---------cccCCcc--------cceEE-eccccccee-----eeecccccccceee
Confidence 9999999 9999875322111 1111100 00000 011110000 12235678889999
Q ss_pred EEc-CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEec
Q psy10942 327 TVS-PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405 (537)
Q Consensus 327 ~~s-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 405 (537)
.|+ |+++.+++++.|+.+++||+. ..+....+..+.. .++.............+.
T Consensus 261 ~~~~~dg~~l~s~s~d~~i~vwd~~-~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~~~~---------- 316 (393)
T 4gq1_A 261 RWIGSDGSGILAMCKSGAWLRWNLF-ANNDYNEISDSTM-------------KLGPKNLLPNVQGISLFP---------- 316 (393)
T ss_dssp EEETTTTCEEEEECTTSEEEEEEC---------------------------------CCSCSEEEECSSC----------
T ss_pred eeecCCCCEEEEEeCCCCEEEEECc-cCCCCceEeeecC-------------ccccEEEccccccccccC----------
Confidence 987 799999999999999999998 4444443333321 111111111111111111
Q ss_pred CCCceEEeeeeEEEEcC--CCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942 406 DENQIITGGVWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI 483 (537)
Q Consensus 406 ~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~ 483 (537)
......++| ++.++++|+.||.|++||+.+++....+..|..+|.+++|+|||++||+++.+| +.+|.+
T Consensus 317 --------~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 317 --------SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp --------CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred --------cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 122233443 345677888899999999999999888888999999999999999999999776 666654
No 129
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-29 Score=235.06 Aligned_cols=233 Identities=9% Similarity=-0.010 Sum_probs=174.5
Q ss_pred CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEEeccCcccC
Q psy10942 160 EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKE 239 (537)
Q Consensus 160 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~ 239 (537)
.++..+++++.++. | ++||+ .+++.... -. ...|.++ .++|+
T Consensus 46 ~d~~~l~sg~~Dg~----v-----------------~iwd~-------~~~~~~~~-----~~--~~~v~~~---~~~~~ 87 (343)
T 3lrv_A 46 YDKWVCMCRCEDGA----L-----------------HFTQL-------KDSKTITT-----IT--TPNPRTG---GEHPA 87 (343)
T ss_dssp EEEEEEEEEEETTE----E-----------------EEEEE-------SSSSCEEE-----EE--EECCCTT---CCCCS
T ss_pred CCCCEEEEECCCCc----E-----------------EEEEC-------CCCcEEEE-----Ee--cCCceee---eeCCc
Confidence 45566666666666 7 77777 66555522 11 3456666 67776
Q ss_pred CCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccccccc
Q psy10942 240 EDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGH 319 (537)
Q Consensus 240 ~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 319 (537)
+++++.|+.++ +|+... .+.+|+..+++... .....|
T Consensus 88 ---~~s~s~D~~i~--~w~~~~----------------------------------~~~~~~~~~~~~~~----~~~~~~ 124 (343)
T 3lrv_A 88 ---IISRGPCNRLL--LLYPGN----------------------------------QITILDSKTNKVLR----EIEVDS 124 (343)
T ss_dssp ---EEEECSTTEEE--EEETTT----------------------------------EEEEEETTTCCEEE----EEECCC
T ss_pred ---eEEecCCCeEE--EEEccC----------------------------------ceEEeecCCcceeE----EeecCC
Confidence 77777777777 777654 45667777765432 223467
Q ss_pred CCCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcc
Q psy10942 320 EKDINCVTVSP--NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK 397 (537)
Q Consensus 320 ~~~v~~~~~s~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 397 (537)
...|.+++|+| +++++++++.|+.|++||++ ..+.+.....+. ..
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~-------------------------------~~- 171 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQYIVHSAKS-------------------------------DV- 171 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESS-SSCEEEEECCCS-------------------------------SC-
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcEEEEEecCC-------------------------------CC-
Confidence 78999999999 99999999999999999998 444333221111 11
Q ss_pred eEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee-eEeec-CCcceEEEEEecCCCEEEEEeCC
Q psy10942 398 IWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL-KSLEG-HDASVLRCHFINKGTQIVSTGAD 475 (537)
Q Consensus 398 i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~s~~~d 475 (537)
.+.+++|+|++++|++|+.||.|++||+++++.+ ..+.. |.++|++++|+|++.+|++++ |
T Consensus 172 ----------------~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~ 234 (343)
T 3lrv_A 172 ----------------EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D 234 (343)
T ss_dssp ----------------CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S
T ss_pred ----------------ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C
Confidence 6888999999999999999999999999998887 78888 999999999999999999999 4
Q ss_pred CcEEEEECCCCeeEEEecC---CccceeccCCCCCCccc--cccceeeecCCCEEEEEeC-CCCEEeC
Q psy10942 476 GLLKLWSIKTSTCVSTFDK---HALKIRNSDSENDHKGF--GLPRQLCSRNSDCEYRGGW-SPQVVVY 537 (537)
Q Consensus 476 g~v~vwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~--~~~~~~~s~~~~~l~s~~~-dg~i~vW 537 (537)
+.|++||+++++.+..+.. |...+ . ++ +|+|+|++|++++. |+.++||
T Consensus 235 ~~v~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 235 QTVVCFDLRKDVGTLAYPTYTIPEFKT-----------GTVTY---DIDDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp SBEEEEETTSSTTCBSSCCCBC----------------CCEEE---EECTTSSEEEEEETTTTEEEEE
T ss_pred CeEEEEEcCCCCcceeecccccccccc-----------cceEE---EECCCCCEEEEecCCCCcEEEE
Confidence 5999999999877665554 33344 3 36 99999999999988 9999998
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=2.2e-27 Score=234.43 Aligned_cols=317 Identities=13% Similarity=0.057 Sum_probs=227.0
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEec--ccccCcccccccccceeE
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRL--NSETGLEERPNKILKFRK 143 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~ 143 (537)
++.++++.+.++.|.+||..+++++.++.....+..++|+|||++|++++.|+.|++||+ .+ .+.+.
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-----------~~~~~ 216 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE-----------PTKVA 216 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSS-----------CEEEE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCC-----------CcEEE
Confidence 668889999999999999999999988885555999999999999999999999999999 66 67777
Q ss_pred EeecchhhhhhhhcccC----CCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccc
Q psy10942 144 QFVGFSDEILDIALLGE----EDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHN 216 (537)
Q Consensus 144 ~~~~~~~~v~~~~~~~~----~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~ 216 (537)
++..+ ..+..++|+ + ++++++++.. ++. | .+||. .+.+++ +..
T Consensus 217 ~i~~g-~~p~~va~s-p~~~~dg~~l~v~~~~~~~----v-----------------~v~D~-------~t~~~~~~i~~ 266 (543)
T 1nir_A 217 EIKIG-IEARSVESS-KFKGYEDRYTIAGAYWPPQ----F-----------------AIMDG-------ETLEPKQIVST 266 (543)
T ss_dssp EEECC-SEEEEEEEC-CSTTCTTTEEEEEEEESSE----E-----------------EEEET-------TTCCEEEEEEC
T ss_pred EEecC-CCcceEEeC-CCcCCCCCEEEEEEccCCe----E-----------------EEEec-------cccccceeecc
Confidence 77744 447899999 6 8888877764 444 8 88998 766655 320
Q ss_pred cc--cc---cCCCcCeEEEEeccCcccCCCee-eeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE
Q psy10942 217 TE--RL---GRDELKTVTLLERGKTVKEEDLF-PRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS 290 (537)
Q Consensus 217 ~~--~~---~h~~~~~v~~~~~~~~s~~~~~l-~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 290 (537)
.. .. .|. ...+.++ .++|++..+ ++...++.|. +|+...
T Consensus 267 ~g~~~~~~~~~~-~~~v~~i---~~s~~~~~~~vs~~~~g~i~--vvd~~~----------------------------- 311 (543)
T 1nir_A 267 RGMTVDTQTYHP-EPRVAAI---IASHEHPEFIVNVKETGKVL--LVNYKD----------------------------- 311 (543)
T ss_dssp CEECSSSCCEES-CCCEEEE---EECSSSSEEEEEETTTTEEE--EEECTT-----------------------------
T ss_pred cCcccCcccccc-CCceEEE---EECCCCCEEEEEECCCCeEE--EEEecC-----------------------------
Confidence 00 00 020 2257777 777766443 3444555555 555544
Q ss_pred EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942 291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIV 369 (537)
Q Consensus 291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~ 369 (537)
.+.+. ... ..+...+.+++|+|+|++|++++ .++.|.+||+. .++++..+.....
T Consensus 312 --------------~~~l~---~~~-i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~-tg~l~~~i~~g~~----- 367 (543)
T 1nir_A 312 --------------IDNLT---VTS-IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK-DRRLSALVDVGKT----- 367 (543)
T ss_dssp --------------SSSCE---EEE-EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSS-----
T ss_pred --------------CCcce---eEE-eccCcCccCceECCCCCEEEEEecCCCeEEEEECC-CCeEEEeeccCCC-----
Confidence 22111 000 12334567889999999877655 57899999998 5666655543110
Q ss_pred EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEe-CCCcEEEEECCC----
Q psy10942 370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSS-GDATIKLWCLTD---- 443 (537)
Q Consensus 370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~-~dg~i~i~d~~~---- 443 (537)
.|.. ....+ ++|+ +..++++. .|++|.+||+.+
T Consensus 368 -----------------------ph~g-----------------~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 368 -----------------------PHPG-----------------RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp -----------------------BCCT-----------------TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred -----------------------CCCC-----------------CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 0110 11111 4566 56667765 579999999988
Q ss_pred ---ceeeeEeecCCcceEEEEEecCCCEEEEEe-------CCCcEEEEECCCCeeE-EEe--------cCCccceeccCC
Q psy10942 444 ---YVCLKSLEGHDASVLRCHFINKGTQIVSTG-------ADGLLKLWSIKTSTCV-STF--------DKHALKIRNSDS 504 (537)
Q Consensus 444 ---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-------~dg~v~vwd~~~~~~~-~~~--------~~~~~~i~~~~~ 504 (537)
++.++++.+|.+.+..++++|++++|++++ .+++|.+||+.+++.. ..+ ..+...+
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~----- 481 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRV----- 481 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEE-----
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCce-----
Confidence 899999999988899999999999999987 2679999999998876 443 2344556
Q ss_pred CCCCccccccceeeecCCCEEEEEe-----CCCCEEeC
Q psy10942 505 ENDHKGFGLPRQLCSRNSDCEYRGG-----WSPQVVVY 537 (537)
Q Consensus 505 ~~~~~~~~~~~~~~s~~~~~l~s~~-----~dg~i~vW 537 (537)
..+ .|+|||+.|+++. .|+.|.||
T Consensus 482 ------~~~---~~~~~g~~~~~s~~~~~~~~~~i~v~ 510 (543)
T 1nir_A 482 ------VQP---EYNKRGDEVWFSVWNGKNDSSALVVV 510 (543)
T ss_dssp ------EEE---EECSSSSEEEEEEECCTTSCCEEEEE
T ss_pred ------Eec---cCCCCCCEEEEEeecCCCCCCeEEEE
Confidence 777 9999999998763 47889887
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=3e-27 Score=226.80 Aligned_cols=293 Identities=12% Similarity=-0.006 Sum_probs=213.8
Q ss_pred CcEEEEEeC----ccc----eEEeeec--cceehhhh--cCCC-cceEEEEEec--------------cccEEEEEeCC-
Q psy10942 66 GKTFVLAGG----EKS----LLHYYET--SAVKELYQ--HGLS-SPLVRIVRSS--------------VKRMYAVVTAD- 117 (537)
Q Consensus 66 ~~~~~~~~~----~~~----~i~~wd~--~~~~~~~~--~~~~-~~v~~~~~s~--------------~~~~la~~~~d- 117 (537)
+..++++++ .+| .+++||+ .+++++.. +..+ ..+..+++++ .+..++.++.+
T Consensus 74 g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~ 153 (415)
T 2hqs_A 74 GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN 153 (415)
T ss_dssp TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECS
T ss_pred CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecC
Confidence 556776765 456 8999999 88887633 4433 4566666654 15666666654
Q ss_pred -----ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcch
Q psy10942 118 -----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNE 192 (537)
Q Consensus 118 -----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~ 192 (537)
+.|++||+++ ...+.+.+|...+.+++|+ |+++.|++++.+.. ...|
T Consensus 154 ~~~~~~~i~i~d~~g------------~~~~~l~~~~~~v~~~~~S-pdg~~la~~s~~~~-~~~i-------------- 205 (415)
T 2hqs_A 154 GGQFPYELRVSDYDG------------YNQFVVHRSPQPLMSPAWS-PDGSKLAYVTFESG-RSAL-------------- 205 (415)
T ss_dssp SSSCCEEEEEEETTS------------CSCEEEEEESSCEEEEEEC-TTSSEEEEEECTTS-SCEE--------------
T ss_pred CCCccceEEEEcCCC------------CCCEEEeCCCCcceeeEEc-CCCCEEEEEEecCC-CcEE--------------
Confidence 7999999976 3356778899999999999 78888888776541 1338
Q ss_pred hhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeee-eccCCCcceeccccccCCCccccccc
Q psy10942 193 WFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIF 270 (537)
Q Consensus 193 ~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~ 270 (537)
++||+ .+++.. +. .| ...+.++ +|+|||++|+ +++.++..
T Consensus 206 ---~~~d~-------~tg~~~~l~-----~~--~~~~~~~---~~spdg~~la~~~~~~g~~------------------ 247 (415)
T 2hqs_A 206 ---VIQTL-------ANGAVRQVA-----SF--PRHNGAP---AFSPDGSKLAFALSKTGSL------------------ 247 (415)
T ss_dssp ---EEEET-------TTCCEEEEE-----CC--SSCEEEE---EECTTSSEEEEEECTTSSC------------------
T ss_pred ---EEEEC-------CCCcEEEee-----cC--CCcccCE---EEcCCCCEEEEEEecCCCc------------------
Confidence 99999 777766 66 78 8899999 9999999887 55544432
Q ss_pred ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEE
Q psy10942 271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DK--TVKVW 347 (537)
Q Consensus 271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~--~i~i~ 347 (537)
.|++||+.+++. ..+..|...+.+++|+|||+.|++++. ++ .|++|
T Consensus 248 -------------------------~i~~~d~~~~~~------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 248 -------------------------NLYVMDLASGQI------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp -------------------------EEEEEETTTCCE------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred -------------------------eEEEEECCCCCE------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 355556555442 223456778999999999999998876 34 45555
Q ss_pred EccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL 427 (537)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 427 (537)
|+. +.+. ..+. .+.. .+.+++|+|||++|
T Consensus 297 d~~-~~~~-~~l~--------------------------------~~~~-----------------~~~~~~~spdG~~l 325 (415)
T 2hqs_A 297 NIN-GGAP-QRIT--------------------------------WEGS-----------------QNQDADVSSDGKFM 325 (415)
T ss_dssp ETT-SSCC-EECC--------------------------------CSSS-----------------EEEEEEECTTSSEE
T ss_pred ECC-CCCE-EEEe--------------------------------cCCC-----------------cccCeEECCCCCEE
Confidence 665 2211 1111 1111 56778999999999
Q ss_pred EEEeCC---CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEecCCccceec
Q psy10942 428 ISSSGD---ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFDKHALKIRN 501 (537)
Q Consensus 428 ~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~i~~ 501 (537)
++++.+ ..|++||+.+++.. .+..|. .+.+++|+|+|++|++++.++ .|++||+. ++....+..|.+.|
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v-- 400 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQV-- 400 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEE--
T ss_pred EEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCC--
Confidence 988764 58999999988764 455554 899999999999999988877 79999986 66678899999999
Q ss_pred cCCCCCCccccccceeeecCCC
Q psy10942 502 SDSENDHKGFGLPRQLCSRNSD 523 (537)
Q Consensus 502 ~~~~~~~~~~~~~~~~~s~~~~ 523 (537)
.++ +|+|...
T Consensus 401 ---------~~~---~~~~~~~ 410 (415)
T 2hqs_A 401 ---------KFP---AWSPYLH 410 (415)
T ss_dssp ---------EEE---EECCCCC
T ss_pred ---------cCC---ccccccc
Confidence 999 9999754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=2.1e-26 Score=220.92 Aligned_cols=308 Identities=14% Similarity=0.009 Sum_probs=206.5
Q ss_pred eeeeeeeccCCcceEEEec----Ccc----eEEEEEc--Cccceeee--ec-cccccceeeeEeecC-------cccccc
Q psy10942 5 VTCFDVIPQITSEFSVHCG----RDK----VLFTWDL--SSRKQLRS--YP-AYESLETCAVFHLSD-------ETESKS 64 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~----~~g----~v~iwd~--~~~~~~~~--~~-~~~~~~~~~~~~~~~-------~~~~~~ 64 (537)
|...+|.+ ...+++++|+ .+| .|++||+ .+++++.. +. +...+..+++ .+. ......
T Consensus 65 ~~~~~w~~-~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 65 VQPAAWSA-LGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGH--TASDEVFEKLTGIKGA 141 (415)
T ss_dssp CCHHHHHT-TTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHH--HHHHHHHHHHHSSCCC
T ss_pred cCHHHHHh-cCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHH--HHHHHHHHHHcCCCCc
Confidence 34445552 2335666775 467 8999999 99987743 33 2333333311 110 000000
Q ss_pred CCcEEEEEeCc--c---ceEEeeeccceehhhhcC-CCcceEEEEEeccccEEEEEeCCc---eEEEEecccccCccccc
Q psy10942 65 GGKTFVLAGGE--K---SLLHYYETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADH---NISLYRLNSETGLEERP 135 (537)
Q Consensus 65 ~~~~~~~~~~~--~---~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~ 135 (537)
.+.++++++.. + +.|++||+..+ ....+. +.+.+.+++|||||++||+++.++ .|++||+.+
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-------- 212 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-------- 212 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--------
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC--------
Confidence 02233443332 2 79999999754 444444 446899999999999999999875 899999998
Q ss_pred ccccceeEEeecchhhhhhhhcccCCCccEEEe-eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-
Q psy10942 136 NKILKFRKQFVGFSDEILDIALLGEEDSHIVVA-SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ- 213 (537)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~- 213 (537)
++.. .+..|...+.+++|+ |+++.|++. +.++. ..| ++||+ .+++..
T Consensus 213 ---g~~~-~l~~~~~~~~~~~~s-pdg~~la~~~~~~g~--~~i-----------------~~~d~-------~~~~~~~ 261 (415)
T 2hqs_A 213 ---GAVR-QVASFPRHNGAPAFS-PDGSKLAFALSKTGS--LNL-----------------YVMDL-------ASGQIRQ 261 (415)
T ss_dssp ---CCEE-EEECCSSCEEEEEEC-TTSSEEEEEECTTSS--CEE-----------------EEEET-------TTCCEEE
T ss_pred ---CcEE-EeecCCCcccCEEEc-CCCCEEEEEEecCCC--ceE-----------------EEEEC-------CCCCEEe
Confidence 4443 567788889999999 777777643 33332 347 88898 776665
Q ss_pred ccccccccCCCcCeEEEEeccCcccCCCeeeeccC-CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEe
Q psy10942 214 KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM-EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGS 292 (537)
Q Consensus 214 l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~-d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 292 (537)
+. .| ...+.++ +|+|||++|++++. ++...
T Consensus 262 l~-----~~--~~~~~~~---~~spdg~~l~~~s~~~g~~~--------------------------------------- 292 (415)
T 2hqs_A 262 VT-----DG--RSNNTEP---TWFPDSQNLAFTSDQAGRPQ--------------------------------------- 292 (415)
T ss_dssp CC-----CC--SSCEEEE---EECTTSSEEEEEECTTSSCE---------------------------------------
T ss_pred Cc-----CC--CCcccce---EECCCCCEEEEEECCCCCcE---------------------------------------
Confidence 66 88 8899999 99999998887765 34333
Q ss_pred CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEccCCceeeEEEEecCCCCEEE
Q psy10942 293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---KTVKVWSTTGGLKLLNVLRGHKKGTQIV 369 (537)
Q Consensus 293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~l~ 369 (537)
|++||+.+++. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.
T Consensus 293 ----i~~~d~~~~~~------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~------------------- 343 (415)
T 2hqs_A 293 ----VYKVNINGGAP------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA------------------- 343 (415)
T ss_dssp ----EEEEETTSSCC------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT-------------------
T ss_pred ----EEEEECCCCCE------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC-------------------
Confidence 44445444431 1123345678899999999999988764 356666665
Q ss_pred EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC---cEEEEECCCcee
Q psy10942 370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA---TIKLWCLTDYVC 446 (537)
Q Consensus 370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~~ 446 (537)
+++.. .+..+. .+.+++|+|||++|++++.++ .|++||+. +..
T Consensus 344 --------------~~~~~-~l~~~~------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~ 389 (415)
T 2hqs_A 344 --------------TGGVQ-VLSSTF------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRF 389 (415)
T ss_dssp --------------TCCEE-ECCCSS------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCC
T ss_pred --------------CCCEE-EecCCC------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCc
Confidence 22221 111111 466788999999999888776 79999987 556
Q ss_pred eeEeecCCcceEEEEEecCCC
Q psy10942 447 LKSLEGHDASVLRCHFINKGT 467 (537)
Q Consensus 447 ~~~~~~~~~~v~~~~~s~~~~ 467 (537)
...+..|.+.|.+++|+|...
T Consensus 390 ~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 390 KARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEECCCSSSEEEEEEECCCCC
T ss_pred EEEeeCCCCCCcCCccccccc
Confidence 778888999999999999643
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.1e-25 Score=233.86 Aligned_cols=351 Identities=9% Similarity=-0.049 Sum_probs=223.2
Q ss_pred eeeeeeeeccCCcceEEEecC-cc-----eEEEEEcCccceeeeecccc-------------------------ccceee
Q psy10942 4 CVTCFDVIPQITSEFSVHCGR-DK-----VLFTWDLSSRKQLRSYPAYE-------------------------SLETCA 52 (537)
Q Consensus 4 ~V~~~~~~~~~~~~~l~s~~~-~g-----~v~iwd~~~~~~~~~~~~~~-------------------------~~~~~~ 52 (537)
.|++++|| |||++|++++. ++ .|++||+++++....+.... .+..+
T Consensus 38 ~~~~~~~S--pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 114 (741)
T 2ecf_A 38 TLMKPKVA--PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY- 114 (741)
T ss_dssp CCEEEEEC--TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC-
T ss_pred CCCCceEe--cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee-
Confidence 48899999 89999999987 87 89999999998776554221 24445
Q ss_pred eEeecCccccccCCcEEEEEeCccceEEeeeccce---ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccccc
Q psy10942 53 VFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV---KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSET 129 (537)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~ 129 (537)
.++| ++++|++++. +.|++||+.++ +......+...+..++|||||++||+++. +.|++||+.+
T Consensus 115 -~~Sp--------Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~-- 181 (741)
T 2ecf_A 115 -QWSP--------DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS-- 181 (741)
T ss_dssp -EECT--------TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTT--
T ss_pred -EECC--------CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCC--
Confidence 6688 6677777764 89999999988 44333334468999999999999999875 6899999988
Q ss_pred CcccccccccceeEEeecchh----------------hhhhhhcccCCCccEEEeeeccccCCccc-----------cee
Q psy10942 130 GLEERPNKILKFRKQFVGFSD----------------EILDIALLGEEDSHIVVASNEYLNGGDLS-----------GLV 182 (537)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~l~~~~~~~~~~~~i~-----------~~~ 182 (537)
++..+....+.. .+..++|+ ||+++|++++.+........ ..+
T Consensus 182 ---------g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 182 ---------GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp ---------TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred ---------CCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 343333322222 14789999 78888888876542000000 000
Q ss_pred ecccCCCcch-hhHHHHHHHHHhhhccc-cccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccc
Q psy10942 183 KLGANRSHNE-WFDKTFERILEAKFKQS-SSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKR 259 (537)
Q Consensus 183 ~~~~~~~~~~-~~~~~wd~~~~~~~~~~-~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~ 259 (537)
.......... .-..+||+ .+ ++.. +.. ...| ...+..+ +| |||++|++++.++.-
T Consensus 252 ~~~~~g~~~~~~~l~~~d~-------~~~~~~~~~~~--~~~~--~~~~~~~---~~-pDg~~l~~~~~~~~~------- 309 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISP-------AEQAQTQWIDL--GKEQ--DIYLARV---NW-RDPQHLSFQRQSRDQ------- 309 (741)
T ss_dssp ECCBTTSCCCEEEEEEECS-------STTCCCEEECC--CSCS--SEEEEEE---EE-EETTEEEEEEEETTS-------
T ss_pred ecCCCCCCCCeeEEEEEEC-------CCCCceEEecC--CCCc--ceEEEEE---Ee-CCCCEEEEEEecccC-------
Confidence 0000000000 00066677 55 5443 210 0136 7788899 99 999988865432110
Q ss_pred cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCC----CeEEEEEcCCCCEE
Q psy10942 260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEK----DINCVTVSPNDKLL 335 (537)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l 335 (537)
.+..|++||+.+++.... ...+.. .+..++|+|||+++
T Consensus 310 ---------------------------------~~~~i~~~d~~~g~~~~~-----~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 310 ---------------------------------KKLDLVEVTLASNQQRVL-----AHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp ---------------------------------SEEEEEEEETTTCCEEEE-----EEEECSSCCCCCSCCEECTTSCEE
T ss_pred ---------------------------------CeEEEEEEECCCCceEEE-----EEcCCCCcCCcCCceEECCCCeEE
Confidence 123566666665543211 112211 34578999999999
Q ss_pred EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415 (537)
Q Consensus 336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 415 (537)
++++.|+.+++|.+..... ...+.. +.. .+
T Consensus 352 ~~~~~~g~~~l~~~~~~~~-~~~l~~--------------------------------~~~-----------------~v 381 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGK-AAALTH--------------------------------GNW-----------------SV 381 (741)
T ss_dssp EEECTTSSCEEEEECSSSC-EEESCC--------------------------------SSS-----------------CE
T ss_pred EEecCCCccEEEEEcCCCC-eeeeee--------------------------------cce-----------------EE
Confidence 9999999888887752222 222221 111 45
Q ss_pred eEE-EEcCCCCEEEEE-eCCC--cEEEEECCC-ceeeeEeecCCcceEEEEEecCCCEEEEEeCC----CcEEEEECCCC
Q psy10942 416 WFV-NFSPLDRILISS-SGDA--TIKLWCLTD-YVCLKSLEGHDASVLRCHFINKGTQIVSTGAD----GLLKLWSIKTS 486 (537)
Q Consensus 416 ~~~-~~s~~~~~l~~~-~~dg--~i~i~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~~ 486 (537)
..+ .|+|+++.|+.. +.++ .+++|++.. +.....+.. ...+..++|+||+++|+....+ ..+.+|+...
T Consensus 382 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~- 459 (741)
T 2ecf_A 382 DELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG- 459 (741)
T ss_dssp EEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS-
T ss_pred EeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC-
Confidence 555 589999877654 4454 899999864 555666665 5678899999999998876543 4689999754
Q ss_pred eeEEEe
Q psy10942 487 TCVSTF 492 (537)
Q Consensus 487 ~~~~~~ 492 (537)
+.+..+
T Consensus 460 ~~~~~l 465 (741)
T 2ecf_A 460 EKIATL 465 (741)
T ss_dssp CEEECS
T ss_pred CeEEEe
Confidence 334444
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=5.4e-25 Score=228.71 Aligned_cols=318 Identities=11% Similarity=-0.014 Sum_probs=221.1
Q ss_pred cceEEEEEeccccEEEEEeC-Cc-----eEEEEecccccCcccccccccceeEEeecchh--------------------
Q psy10942 97 SPLVRIVRSSVKRMYAVVTA-DH-----NISLYRLNSETGLEERPNKILKFRKQFVGFSD-------------------- 150 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~-d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 150 (537)
..+.+++|||||++|++++. |+ .|++||+.+ ++....+..+..
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-----------GQTRLLVDSKVVLPGTETLSDEEKARRERQRI 105 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-----------CCEEEEECGGGTC-------------------
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-----------CceeEccchhhcccccccccchhhhhhhhhhh
Confidence 57999999999999999998 87 899999998 455555544432
Q ss_pred ----hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc---ccc-ccccccccC
Q psy10942 151 ----EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS---SQQ-KHNTERLGR 222 (537)
Q Consensus 151 ----~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~---~~~-l~~~~~~~h 222 (537)
.+.+++|+ |++++|++++. +. | ++||+ .++ ... +. .|
T Consensus 106 ~~~~~v~~~~~S-pDg~~l~~~~~-~~----i-----------------~~~d~-------~~~~~~~~~~l~-----~~ 150 (741)
T 2ecf_A 106 AAMTGIVDYQWS-PDAQRLLFPLG-GE----L-----------------YLYDL-------KQEGKAAVRQLT-----HG 150 (741)
T ss_dssp -CCEESCCCEEC-TTSSEEEEEET-TE----E-----------------EEEES-------SSCSTTSCCBCC-----CS
T ss_pred ccccCcceeEEC-CCCCEEEEEeC-Cc----E-----------------EEEEC-------CCCCcceEEEcc-----cC
Confidence 37899999 78888887765 44 8 99999 776 444 66 77
Q ss_pred CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
...+.++ +|+|||++|+.++. +.|. +|++.++... .+.. .. ...+ ..-
T Consensus 151 --~~~~~~~---~~SPDG~~la~~~~-~~i~--~~d~~~g~~~----------~~~~-----------~~-~~~~--~~g 198 (741)
T 2ecf_A 151 --EGFATDA---KLSPKGGFVSFIRG-RNLW--VIDLASGRQM----------QLTA-----------DG-STTI--GNG 198 (741)
T ss_dssp --SSCEEEE---EECTTSSEEEEEET-TEEE--EEETTTTEEE----------ECCC-----------CC-CSSE--EES
T ss_pred --Ccccccc---cCCCCCCEEEEEeC-CcEE--EEecCCCCEE----------Eecc-----------CC-ccce--ecc
Confidence 8889999 99999999998874 5788 8888763210 0000 00 0000 000
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEEc
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK---------------------------------TVKVWST 349 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---------------------------------~i~i~d~ 349 (537)
.. ..........+.+++|+|||++|++++.|+ .|++||+
T Consensus 199 ~~--------~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 199 IA--------EFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CC--------CHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred cc--------ceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 00 000011123357899999999999987765 7888998
Q ss_pred cC-Cc-----------eeeEEEEecCCCCEEEEEcC-----CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942 350 TG-GL-----------KLLNVLRGHKKGTQIVSTGA-----DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412 (537)
Q Consensus 350 ~~-~~-----------~~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 412 (537)
.. .. ..+..+.. ++++.++.+.. +..|++||+.+++....+..+.... +
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-----------~-- 336 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW-----------V-- 336 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC-----------C--
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc-----------C--
Confidence 74 21 22345566 78888886653 5689999999988766554332100 0
Q ss_pred eeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEEE-EEecCCCEEEEE-eCCC--cEEEEECCC-C
Q psy10942 413 GGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLRC-HFINKGTQIVST-GADG--LLKLWSIKT-S 486 (537)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~-~~dg--~v~vwd~~~-~ 486 (537)
..+..++|+|||+++++++.+|.+++|.+. +++ ...+..|...+..+ .|+|+++.|+.. +.++ .+++|++.. +
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence 023467899999999999999988888765 345 77777788888887 599999987654 4455 899999864 5
Q ss_pred eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 487 TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 487 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
+....+.. ...+ ..+ +|||||++|+....
T Consensus 416 ~~~~~l~~-~~~~-----------~~~---~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 416 GQPQRLSK-APGM-----------HSA---SFARNASVYVDSWS 444 (741)
T ss_dssp CCCEECCC-SCSE-----------EEE---EECTTSSEEEEEEE
T ss_pred CCeeeccc-CCCc-----------eEE---EECCCCCEEEEEec
Confidence 55556654 4455 677 99999999886543
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.3e-24 Score=224.41 Aligned_cols=329 Identities=13% Similarity=0.079 Sum_probs=205.5
Q ss_pred eeeeeeccCCcceEEEecCcceEEEEEcCcccee--eeeccc-----------------cccceeeeEeecCccccccCC
Q psy10942 6 TCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQL--RSYPAY-----------------ESLETCAVFHLSDETESKSGG 66 (537)
Q Consensus 6 ~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 66 (537)
..+.|+ ++.+++.+.++ | +||+++++.+ ..+... ..+..+ .++| +
T Consensus 29 ~~~~w~----g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~--~~sp--------d 92 (706)
T 2z3z_A 29 VGLQWM----GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRT--LDAG--------R 92 (706)
T ss_dssp TTCEEE----TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEE--EETT--------T
T ss_pred CCCcCc----CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeE--EECC--------C
Confidence 345555 34566666677 8 9999999873 333221 234555 5577 6
Q ss_pred cEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc-----ccCcccccccccce
Q psy10942 67 KTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS-----ETGLEERPNKILKF 141 (537)
Q Consensus 67 ~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~ 141 (537)
+.++++ . ++.|++||+.+++........+.+.+++|||||++||++ .++.|++||+.+ ++.
T Consensus 93 ~~~~~~-~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~----------- 158 (706)
T 2z3z_A 93 GLVVLF-T-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA----------- 158 (706)
T ss_dssp TEEEEE-E-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC-----------
T ss_pred CeEEEE-E-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc-----------
Confidence 344444 3 589999999998776666666788999999999999985 679999999987 421
Q ss_pred eEEeecchh--------------hhhhhhcccCCCccEEEeeeccc-----------------------------cCCcc
Q psy10942 142 RKQFVGFSD--------------EILDIALLGEEDSHIVVASNEYL-----------------------------NGGDL 178 (537)
Q Consensus 142 ~~~~~~~~~--------------~v~~~~~~~~~~~~l~~~~~~~~-----------------------------~~~~i 178 (537)
.+....+.. .+.+++|+ |++++|++++.+.. ....|
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S-pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWS-PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEEC-TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 111122222 25789999 78888888763321 00124
Q ss_pred cceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccc
Q psy10942 179 SGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELE 257 (537)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw 257 (537)
.+||+ .+++.. +. ....| ...+.++ +|+|||++|++++.++.-.
T Consensus 238 -----------------~~~d~-------~~~~~~~~~--~~~~~--~~~~~~~---~~spdg~~l~~~~~~~~~~---- 282 (706)
T 2z3z_A 238 -----------------GIYHL-------ATGKTVYLQ--TGEPK--EKFLTNL---SWSPDENILYVAEVNRAQN---- 282 (706)
T ss_dssp -----------------EEEET-------TTTEEEECC--CCSCT--TCEEEEE---EECTTSSEEEEEEECTTSC----
T ss_pred -----------------EEEEC-------CCCceEeec--cCCCC--ceeEeeE---EEECCCCEEEEEEeCCCCC----
Confidence 77888 666544 21 01146 6789999 9999999888766543100
Q ss_pred cccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC--CCCEE
Q psy10942 258 KRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP--NDKLL 335 (537)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l 335 (537)
...|++||+.+++....+...........+.+++|+| ||+++
T Consensus 283 ------------------------------------~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l 326 (706)
T 2z3z_A 283 ------------------------------------ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI 326 (706)
T ss_dssp ------------------------------------EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE
T ss_pred ------------------------------------eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEE
Confidence 1234555555542211110000011111245789999 99999
Q ss_pred EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415 (537)
Q Consensus 336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 415 (537)
+++..|+.+++|.+......+..+..+ .. .+
T Consensus 327 ~~~~~~g~~~l~~~~~~~~~~~~l~~~--------------------------------~~-----------------~v 357 (706)
T 2z3z_A 327 WQSRRDGWNHLYLYDTTGRLIRQVTKG--------------------------------EW-----------------EV 357 (706)
T ss_dssp EEECTTSSCEEEEEETTSCEEEECCCS--------------------------------SS-----------------CE
T ss_pred EEEccCCccEEEEEECCCCEEEecCCC--------------------------------Ce-----------------EE
Confidence 999899999998876333333322211 11 44
Q ss_pred eE-EEEcCCCCEEEEEeCC-C----cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC----CcEEEEECCC
Q psy10942 416 WF-VNFSPLDRILISSSGD-A----TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD----GLLKLWSIKT 485 (537)
Q Consensus 416 ~~-~~~s~~~~~l~~~~~d-g----~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~ 485 (537)
.. ++|+|+++.|+.++.+ + .|..||+.+++ ...+. |...+.+++|+|||++|+..+.+ +.|++||+.+
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 44 7899999887766544 3 67777777765 33444 66779999999999998876543 4699999988
Q ss_pred Ce
Q psy10942 486 ST 487 (537)
Q Consensus 486 ~~ 487 (537)
++
T Consensus 436 ~~ 437 (706)
T 2z3z_A 436 GS 437 (706)
T ss_dssp CE
T ss_pred Ce
Confidence 87
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=4.9e-25 Score=228.41 Aligned_cols=341 Identities=10% Similarity=0.012 Sum_probs=215.2
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCCc----ceEEEEEeccccEEEEEeCC---------ceEEEEecccccCcc
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSS----PLVRIVRSSVKRMYAVVTAD---------HNISLYRLNSETGLE 132 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~----~v~~~~~s~~~~~la~~~~d---------~~i~iwd~~~~~~~~ 132 (537)
+++++++ +.||.|++||+.+++....+..+. .|.+++|||||++||+++.+ +.+.+||+.+
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~----- 100 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH----- 100 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS-----
T ss_pred CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC-----
Confidence 5566665 679999999999998877777654 49999999999999999864 6788999998
Q ss_pred cccccccceeEEe---ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc
Q psy10942 133 ERPNKILKFRKQF---VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS 209 (537)
Q Consensus 133 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~ 209 (537)
++. +.+ .+|...+..++|+ |+++.|++++. +. | ++||. .+
T Consensus 101 ------~~~-~~l~~~~~~~~~~~~~~~S-PdG~~la~~~~-~~----i-----------------~~~~~-------~~ 143 (723)
T 1xfd_A 101 ------GDP-QSLDPPEVSNAKLQYAGWG-PKGQQLIFIFE-NN----I-----------------YYCAH-------VG 143 (723)
T ss_dssp ------CCC-EECCCTTCCSCCCSBCCBC-SSTTCEEEEET-TE----E-----------------EEESS-------SS
T ss_pred ------Cce-EeccCCccccccccccEEC-CCCCEEEEEEC-Ce----E-----------------EEEEC-------CC
Confidence 333 233 3444558899999 78888887765 44 8 89998 76
Q ss_pred cccc-ccccccccCCCcC------------------eEEEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccccc
Q psy10942 210 SSQQ-KHNTERLGRDELK------------------TVTLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGI 269 (537)
Q Consensus 210 ~~~~-l~~~~~~~h~~~~------------------~v~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~ 269 (537)
++.. +.. .+ .. .+.++ +|+|||++|++++.+ +.+. +|++.......
T Consensus 144 g~~~~~~~----~~--~~~~~~~g~~~~v~~ee~~~~~~~~---~~SpDg~~la~~~~~~~~~~--~~~~~~~~~~~--- 209 (723)
T 1xfd_A 144 KQAIRVVS----TG--KEGVIYNGLSDWLYEEEILKTHIAH---WWSPDGTRLAYAAINDSRVP--IMELPTYTGSI--- 209 (723)
T ss_dssp SCCEEEEC----CC--BTTTEEEEECCHHHHHTTSSSSEEE---EECTTSSEEEEEEEECTTSC--EEEECCCSSSS---
T ss_pred CceEEEec----CC--CCCceECcccceeEEEEeccCcceE---EECCCCCEEEEEEECCCccc--eEEeeccCCcC---
Confidence 6555 220 22 22 23678 999999999988755 4677 88765422110
Q ss_pred cccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec-ccccccCCCeEEEEEcCCCCEEEEEeCC----CcE
Q psy10942 270 FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR-GHKKGHEKDINCVTVSPNDKLLASGSLD----KTV 344 (537)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i 344 (537)
.+....+.....+. ...+..|++||+.+++....+.. .....+...+..++|+|||+++++.... ..|
T Consensus 210 -~~~~~~~~~~~~G~------~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 210 -YPTVKPYHYPKAGS------ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp -SCCCEEEECCBTTS------CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred -CCcceeccCCCCCC------CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 01111111111110 01234899999988764222100 1112246678999999999988766432 356
Q ss_pred EEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC
Q psy10942 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD 424 (537)
Q Consensus 345 ~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~ 424 (537)
++||+. +++....+..+.. ..+. .....++|+|||
T Consensus 283 ~~~d~~-~g~~~~~~~~~~~-------------------------------~~~~-------------~~~~~~~~spdg 317 (723)
T 1xfd_A 283 TLCDAT-TGVCTKKHEDESE-------------------------------AWLH-------------RQNEEPVFSKDG 317 (723)
T ss_dssp EEEETT-TCCEEEEEEEECS-------------------------------SCCC-------------CCCCCCEECTTS
T ss_pred EEEeCC-CCcceEEEEeccC-------------------------------CEEe-------------ccCCCceEcCCC
Confidence 666665 3333222221110 0000 001257899999
Q ss_pred CEEEE--EeCCC------cEEEEE-CCCce--eeeEeecCCcceEE-EEEecCCCEEEEEeCC---CcEEEEECCCCe--
Q psy10942 425 RILIS--SSGDA------TIKLWC-LTDYV--CLKSLEGHDASVLR-CHFINKGTQIVSTGAD---GLLKLWSIKTST-- 487 (537)
Q Consensus 425 ~~l~~--~~~dg------~i~i~d-~~~~~--~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~v~vwd~~~~~-- 487 (537)
+.|+. ...++ .|.+|| ...++ +...+..+...+.. ++|+|||+.|+..+.+ +.+++|++....
T Consensus 318 ~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~ 397 (723)
T 1xfd_A 318 RKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF 397 (723)
T ss_dssp CSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC
T ss_pred CeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC
Confidence 87765 44566 577777 34443 14555544444554 6999999999876655 789999986432
Q ss_pred eEEEecC---CccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 488 CVSTFDK---HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 488 ~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
....+.. |...+ ..+ +|+|||++|+...
T Consensus 398 ~~~~l~~~~~~~~~~-----------~~~---~~spdg~~l~~~~ 428 (723)
T 1xfd_A 398 NRQCLSCDLVENCTY-----------FSA---SFSHSMDFFLLKC 428 (723)
T ss_dssp CCBCSSTTSSSSCCC-----------CEE---EECTTSSEEEEEC
T ss_pred CcceecccccCCCCe-----------EEE---EECCCCCEEEEEc
Confidence 2333432 44555 677 9999999888653
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=2.7e-23 Score=214.60 Aligned_cols=337 Identities=13% Similarity=0.091 Sum_probs=212.4
Q ss_pred EEEEEeCccceEEeeeccceehh-hhcCC-C-----------------cceEEEEEeccccEEEEEeCCceEEEEecccc
Q psy10942 68 TFVLAGGEKSLLHYYETSAVKEL-YQHGL-S-----------------SPLVRIVRSSVKRMYAVVTADHNISLYRLNSE 128 (537)
Q Consensus 68 ~~~~~~~~~~~i~~wd~~~~~~~-~~~~~-~-----------------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~ 128 (537)
.+++ .+.++ | +||+.+++.+ ..+.. . ..|.+++|||| ++++.+. ++.|++||+.+
T Consensus 37 ~~~~-~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~- 110 (706)
T 2z3z_A 37 NYVF-IEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLA- 110 (706)
T ss_dssp EEEE-EETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEEETTT-
T ss_pred eEEE-EeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEEECCC-
Confidence 4444 44466 7 9999999873 22211 1 35999999999 6666554 59999999988
Q ss_pred cCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcc
Q psy10942 129 TGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQ 208 (537)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~ 208 (537)
.+. ..+..+...+.+++|+ |+++.|+++ .++. | ++||+ .
T Consensus 111 ----------~~~-~~l~~~~~~~~~~~~S-pdG~~la~~-~~~~----i-----------------~v~~~-------~ 149 (706)
T 2z3z_A 111 ----------RKV-TYLFDTNEETASLDFS-PVGDRVAYV-RNHN----L-----------------YIARG-------G 149 (706)
T ss_dssp ----------TEE-EEEECCTTCCTTCEEC-TTSSEEEEE-ETTE----E-----------------EEEEC-------B
T ss_pred ----------Cce-EEccCCcccccCCcCC-CCCCEEEEE-ECCe----E-----------------EEEec-------C
Confidence 443 3455567779999999 788888774 4555 8 99998 6
Q ss_pred c-----cccc-ccccccccCCCcCe--------------EEEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccc
Q psy10942 209 S-----SSQQ-KHNTERLGRDELKT--------------VTLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLF 267 (537)
Q Consensus 209 ~-----~~~~-l~~~~~~~h~~~~~--------------v~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~ 267 (537)
+ ++.. +.. .+ ... +.++ .|+|||++|++++.| ..+. .+..........
T Consensus 150 ~~~~~~g~~~~~~~----~~--~~~~~~g~~~~~ee~~~~~~~---~~SpDg~~la~~~~d~~~~~--~~~~~~~~~~~~ 218 (706)
T 2z3z_A 150 KLGEGMSRAIAVTI----DG--TETLVYGQAVHQREFGIEKGT---FWSPKGSCLAFYRMDQSMVK--PTPIVDYHPLEA 218 (706)
T ss_dssp CTTSCCCCCEESCS----CC--BTTEEESSCCGGGCTTCCCSE---EECTTSSEEEEEEEECTTSC--CEEEEECCSSSC
T ss_pred cccccCCCcEEecc----CC--CCCeEcccchhhhhcCCCceE---EECCCCCEEEEEEECCCCCc--eEEeeccCCCCC
Confidence 6 5544 220 22 222 4788 999999999988743 3344 433322110000
Q ss_pred cccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-----
Q psy10942 268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK----- 342 (537)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----- 342 (537)
. .......... ....+..|++||+.+++... ......|...+.+++|+|||+.|++++.++
T Consensus 219 ~-----~~~~~y~~~g------~~~~~~~l~~~d~~~~~~~~---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 219 E-----SKPLYYPMAG------TPSHHVTVGIYHLATGKTVY---LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp E-----EEEECCCBTT------SCCCEEEEEEEETTTTEEEE---CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred c-----eEEeeCCCCC------CCCCeeEEEEEECCCCceEe---eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 0 0000000000 01134679999999876422 111235667899999999999999887665
Q ss_pred cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC
Q psy10942 343 TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP 422 (537)
Q Consensus 343 ~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~ 422 (537)
.|++||+.++............ ..+ ..+..++|+|
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~-------------------------------~~~--------------~~~~~~~~sp 319 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDK-------------------------------HYV--------------EPLHPLTFLP 319 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECS-------------------------------SCC--------------CCCSCCEECT
T ss_pred EEEEEECCCCceeeEEEEccCC-------------------------------CeE--------------CccCCceeec
Confidence 7777777622122211111100 000 0235578999
Q ss_pred --CCCEEEEEeCCCcEEEEECC-CceeeeEeecCCcceEE-EEEecCCCEEEEEeCC-C----cEEEEECCCCeeEEEec
Q psy10942 423 --LDRILISSSGDATIKLWCLT-DYVCLKSLEGHDASVLR-CHFINKGTQIVSTGAD-G----LLKLWSIKTSTCVSTFD 493 (537)
Q Consensus 423 --~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d-g----~v~vwd~~~~~~~~~~~ 493 (537)
||+++++++.++.+++|++. +++.+..+..|...+.. ++|+|+++.|+.++.+ + .|+.||+.+++ ...+.
T Consensus 320 ~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~ 398 (706)
T 2z3z_A 320 GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT 398 (706)
T ss_dssp TCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC
T ss_pred CCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc
Confidence 99999999999999999876 56777788878777877 7999999988766554 4 67777877765 33333
Q ss_pred CCccceeccCCCCCCccccccceeeecCCCEEEEEeCC----CCEEeC
Q psy10942 494 KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS----PQVVVY 537 (537)
Q Consensus 494 ~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d----g~i~vW 537 (537)
|...+ ..+ +|||||++|+..+.+ +.|.+|
T Consensus 399 -~~~~~-----------~~~---~~spdg~~l~~~~~~~~~p~~i~l~ 431 (706)
T 2z3z_A 399 -PESGM-----------HRT---QLSPDGSAIIDIFQSPTVPRKVTVT 431 (706)
T ss_dssp -CSSSE-----------EEE---EECTTSSEEEEEEECSSCSCEEEEE
T ss_pred -CCCce-----------EEE---EECCCCCEEEEEecCCCCCcEEEEE
Confidence 55556 777 999999998876443 347665
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=4.5e-23 Score=192.87 Aligned_cols=297 Identities=10% Similarity=-0.003 Sum_probs=208.2
Q ss_pred ceEEEecCcceEEEEEcCccceeeeecccc---ccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhc
Q psy10942 17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYE---SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQH 93 (537)
Q Consensus 17 ~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 93 (537)
++|++++.++.|.+||+.+++.+..++... ....+ .+.|. +..++++...++.|.+||+.+++.+..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~s~d-------g~~l~v~~~~~~~v~~~d~~~~~~~~~~ 72 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVP--MVAPG-------GRIAYATVNKSESLVKIDLVTGETLGRI 72 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCE--EECTT-------SSEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccce--EEcCC-------CCEEEEEeCCCCeEEEEECCCCCeEeeE
Confidence 578999999999999999999998887555 45666 66784 4456677777899999999999887766
Q ss_pred CCCc------ceEEEEEeccccEEEEEe------------CCceEEEEecccccCcccccccccceeEEeecchhhhhhh
Q psy10942 94 GLSS------PLVRIVRSSVKRMYAVVT------------ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDI 155 (537)
Q Consensus 94 ~~~~------~v~~~~~s~~~~~la~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 155 (537)
.... .+..++|+|||++|+++. .++.|.+||+.+ .+....+.. ...+.++
T Consensus 73 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-----------~~~~~~~~~-~~~~~~~ 140 (337)
T 1pby_B 73 DLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-----------LSRRKAFEA-PRQITML 140 (337)
T ss_dssp ECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-----------TEEEEEEEC-CSSCCCE
T ss_pred EcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-----------CcEEEEEeC-CCCccee
Confidence 5433 678899999999998886 568999999988 566666654 3457889
Q ss_pred hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEec
Q psy10942 156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLER 233 (537)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~ 233 (537)
+|+ +++++++++ ++. + .+||+ .+++.. +. .+ . ....+
T Consensus 141 ~~s-~dg~~l~~~--~~~----i-----------------~~~d~-------~~~~~~~~~~-----~~--~-~~~~~-- 179 (337)
T 1pby_B 141 AWA-RDGSKLYGL--GRD----L-----------------HVMDP-------EAGTLVEDKP-----IQ--S-WEAET-- 179 (337)
T ss_dssp EEC-TTSSCEEEE--SSS----E-----------------EEEET-------TTTEEEEEEC-----ST--T-TTTTT--
T ss_pred EEC-CCCCEEEEe--CCe----E-----------------EEEEC-------CCCcEeeeee-----cc--c-cCCCc--
Confidence 999 778877776 344 8 88998 666554 32 22 1 11244
Q ss_pred cCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942 234 GKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR 313 (537)
Q Consensus 234 ~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 313 (537)
.|+|++++++..+..+.....+|........... .. .....|.+||..+++.. .
T Consensus 180 -~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----------------~~~~~v~~~d~~~~~~~-~--- 233 (337)
T 1pby_B 180 -YAQPDVLAVWNQHESSGVMATPFYTARKDIDPAD-----PT----------------AYRTGLLTMDLETGEMA-M--- 233 (337)
T ss_dssp -BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTS-----GG----------------GEEEEEEEEETTTCCEE-E---
T ss_pred -eeCCCccEEeeeccCCCceeeeeecccccccccc-----cc----------------ccccceEEEeCCCCCce-E---
Confidence 7899998777655443322001211110000000 00 00126899999988653 1
Q ss_pred ccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeecc
Q psy10942 314 GHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 393 (537)
Q Consensus 314 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 393 (537)
.....+...+.+++|+|++++++++ ++.|++||+. ..+.+..+....
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~-~~~~~~~~~~~~------------------------------ 280 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE-KNASIKRVPLPH------------------------------ 280 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT-TTEEEEEEECSS------------------------------
T ss_pred eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECC-CCcCcceecCCC------------------------------
Confidence 1234556678899999999999988 6889999887 444443332110
Q ss_pred CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942 394 HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD 454 (537)
Q Consensus 394 ~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 454 (537)
.+.+++|+|++++|++++.++.|.+||+.+++.+..+..+.
T Consensus 281 --------------------~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 281 --------------------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp --------------------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred --------------------ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 56678999999999999999999999999999888887553
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.6e-22 Score=188.60 Aligned_cols=277 Identities=8% Similarity=-0.015 Sum_probs=189.9
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCC-cceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccce-e
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLS-SPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKF-R 142 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~-~ 142 (537)
....+++.+.++.|.+||+.+++.+..+..+ ..+ .++|+|||++|++++. ++.|.+||..+ .+. .
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-----------~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL-----------EPPKV 76 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-----------SSCEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-----------CceeE
Confidence 5567888888999999999999887776654 455 9999999997777665 88999999998 455 6
Q ss_pred EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-cccccccc
Q psy10942 143 KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLG 221 (537)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~ 221 (537)
..+..+.....+++|+ ++++++++ +....+.+.| .+||. .+++.. .. .
T Consensus 77 ~~~~~~~~~~~~~~~s-~dg~~l~~-~~~~~~~~~i-----------------~v~d~-------~~~~~~~~~-----~ 125 (331)
T 3u4y_A 77 VAIQEGQSSMADVDIT-PDDQFAVT-VTGLNHPFNM-----------------QSYSF-------LKNKFISTI-----P 125 (331)
T ss_dssp EEEEECSSCCCCEEEC-TTSSEEEE-CCCSSSSCEE-----------------EEEET-------TTTEEEEEE-----E
T ss_pred EecccCCCCccceEEC-CCCCEEEE-ecCCCCcccE-----------------EEEEC-------CCCCeEEEE-----E
Confidence 6666666655559999 77888774 3333111148 99998 766655 22 2
Q ss_pred CCCcCeEEEEeccCcccCCCeeeec-cCCCc-ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942 222 RDELKTVTLLERGKTVKEEDLFPRQ-SMEPS-TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV 299 (537)
Q Consensus 222 h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~-i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i 299 (537)
+ .....++ +|+|+|++++++ ..++. +. +|++.... .+.
T Consensus 126 ~--~~~~~~~---~~spdg~~l~~~~~~~~~~i~--~~~~~~~g--------------------------------~~~- 165 (331)
T 3u4y_A 126 I--PYDAVGI---AISPNGNGLILIDRSSANTVR--RFKIDADG--------------------------------VLF- 165 (331)
T ss_dssp C--CTTEEEE---EECTTSSCEEEEEETTTTEEE--EEEECTTC--------------------------------CEE-
T ss_pred C--CCCccce---EECCCCCEEEEEecCCCceEE--EEEECCCC--------------------------------cEe-
Confidence 2 3446889 999999866554 45577 88 88887521 110
Q ss_pred EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcee---eEEEEecCCCCEEEEEcCCC
Q psy10942 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKL---LNVLRGHKKGTQIVSTGADG 375 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~---~~~~~~~~~~~~l~~~~~d~ 375 (537)
+.. .. ..........++|+|+|+++++++ .++.|.+||+. ..+. +..+..
T Consensus 166 -~~~-~~---------~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~-~~~~~~~~~~~~~-------------- 219 (331)
T 3u4y_A 166 -DTG-QE---------FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ-NPENITLLNAVGT-------------- 219 (331)
T ss_dssp -EEE-EE---------EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS-STTSCEEEEEEEC--------------
T ss_pred -ecC-Cc---------cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC-CCcccceeeeccC--------------
Confidence 100 00 001233468999999999665554 57889999987 3333 222221
Q ss_pred cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCcee--eeEeec
Q psy10942 376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVC--LKSLEG 452 (537)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~ 452 (537)
.. .+..++|+|||++++++. .++.|.+||+.+++. +..+..
T Consensus 220 ------------------~~------------------~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 220 ------------------NN------------------LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp ------------------SS------------------CCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred ------------------CC------------------CCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 10 566789999999777665 467899999998876 444332
Q ss_pred C----Ccc---eEEEEEecCCCEEEEEeC-CCcEEEEECCCCe
Q psy10942 453 H----DAS---VLRCHFINKGTQIVSTGA-DGLLKLWSIKTST 487 (537)
Q Consensus 453 ~----~~~---v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~ 487 (537)
+ ... ...++|+||+++|++++. ++.|.+||+....
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred ccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 2 222 356899999998876655 5699999997654
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.2e-23 Score=217.93 Aligned_cols=354 Identities=8% Similarity=0.006 Sum_probs=212.2
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecccc----ccceeeeEeecCccccccCCcEEEEEeCcc----
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYE----SLETCAVFHLSDETESKSGGKTFVLAGGEK---- 76 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 76 (537)
+.+++|+ |||+++++ +.||.|++||+++++....+.... .+..+ .++| +++++++++.+
T Consensus 19 ~~~~~~s--pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~--~~Sp--------Dg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 19 DPEAKWI--SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRY--EISP--------DREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCBS--SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEE--EECT--------TSSEEEEEESCCCCS
T ss_pred ccccEEc--CCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceE--EECC--------CCCEEEEEecCccce
Confidence 5678899 89997776 789999999999998877666433 25555 6688 66777777553
Q ss_pred -----ceEEeeeccceeh--hhhcCCC-cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc
Q psy10942 77 -----SLLHYYETSAVKE--LYQHGLS-SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF 148 (537)
Q Consensus 77 -----~~i~~wd~~~~~~--~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 148 (537)
+.|.+||+.+++. +.....+ ..+..++|||||++||+++. +.|++||+.+ ++..+....+
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~-----------g~~~~~~~~~ 153 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG-----------KQAIRVVSTG 153 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-----------SCCEEEECCC
T ss_pred eecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-----------CceEEEecCC
Confidence 7789999998876 2222222 24889999999999999887 7899999988 4444444433
Q ss_pred hhhh------------------hhhhcccCCCccEEEeeeccccCCcccceeecc----------------cCCC-cchh
Q psy10942 149 SDEI------------------LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLG----------------ANRS-HNEW 193 (537)
Q Consensus 149 ~~~v------------------~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~----------------~~~~-~~~~ 193 (537)
...+ .+++|+ ||++.|++++.+... + ....+. .... ....
T Consensus 154 ~~~~~~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 228 (723)
T 1xfd_A 154 KEGVIYNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSR---V-PIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228 (723)
T ss_dssp BTTTEEEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTT---S-CEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred CCCceECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCc---c-ceEEeeccCCcCCCcceeccCCCCCCCCCee
Confidence 3322 679999 788888887765320 1 000000 0000 0000
Q ss_pred hHHHHHHHHHhhhccccccc--ccc-cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc
Q psy10942 194 FDKTFERILEAKFKQSSSQQ--KHN-TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF 270 (537)
Q Consensus 194 ~~~~wd~~~~~~~~~~~~~~--l~~-~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~ 270 (537)
-.++||+ .+++.. +.. .....+ ...+..+ +|+|||+++++....+.
T Consensus 229 ~l~~~d~-------~~~~~~~~l~~~~~~~~~--~~~~~~~---~~SpDg~~l~~~~~~~~------------------- 277 (723)
T 1xfd_A 229 SLHVIGL-------NGPTHDLEMMPPDDPRMR--EYYITMV---KWATSTKVAVTWLNRAQ------------------- 277 (723)
T ss_dssp EEEEEES-------SSSCCCEECCCCCCGGGS--SEEEEEE---EESSSSEEEEEEEETTS-------------------
T ss_pred EEEEEEC-------CCCceeEEeeCCccCCCc--cceeEEE---EEeCCCeEEEEEEcCCC-------------------
Confidence 0167777 655532 330 011134 5678888 99999987765432210
Q ss_pred ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe----EEEEEcCCCCEEEEE--eCCC--
Q psy10942 271 VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI----NCVTVSPNDKLLASG--SLDK-- 342 (537)
Q Consensus 271 ~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~~~--~~d~-- 342 (537)
.+..|++||+.+++..... ...+...+ ..++|+|||+.|+.. ..++
T Consensus 278 ----------------------~~~~i~~~d~~~g~~~~~~----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 278 ----------------------NVSILTLCDATTGVCTKKH----EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp ----------------------CEEEEEEEETTTCCEEEEE----EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred ----------------------CeEEEEEEeCCCCcceEEE----EeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 0134566666655432111 01122222 367999999977753 4555
Q ss_pred ----cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee-E
Q psy10942 343 ----TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW-F 417 (537)
Q Consensus 343 ----~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~-~ 417 (537)
.|.+||+..+... .+...+..... .+. .
T Consensus 332 ~~~~~l~~~d~~~~~~~------------------------------~~~~~l~~~~~-----------------~~~~~ 364 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSN------------------------------DNIQSITSGDW-----------------DVTKI 364 (723)
T ss_dssp SCEEEEEEECSSCCSSS------------------------------CCCCBSCCSSS-----------------CEEEE
T ss_pred cceeEEEEEeccCCCCc------------------------------cceeEeecCCe-----------------EEEee
Confidence 3444442111110 00111111111 223 3
Q ss_pred EEEcCCCCEEEEEeCC---CcEEEEECCCc--eeeeEeec---CCcceEEEEEecCCCEEEEEeCC-C--cEEEEECCCC
Q psy10942 418 VNFSPLDRILISSSGD---ATIKLWCLTDY--VCLKSLEG---HDASVLRCHFINKGTQIVSTGAD-G--LLKLWSIKTS 486 (537)
Q Consensus 418 ~~~s~~~~~l~~~~~d---g~i~i~d~~~~--~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d-g--~v~vwd~~~~ 486 (537)
++|+|||+.|+..+.+ +.+++|++... .....+.. |...+..++|+|||++|+..... + ...+++..++
T Consensus 365 ~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~ 444 (723)
T 1xfd_A 365 LAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDK 444 (723)
T ss_dssp EEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTC
T ss_pred eEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCC
Confidence 6899999998876655 78999987642 23344443 56778999999999988876443 2 3455676666
Q ss_pred eeEEEe
Q psy10942 487 TCVSTF 492 (537)
Q Consensus 487 ~~~~~~ 492 (537)
+.+..+
T Consensus 445 ~~~~~~ 450 (723)
T 1xfd_A 445 KKMFDL 450 (723)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 655444
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=8e-23 Score=187.35 Aligned_cols=255 Identities=13% Similarity=0.067 Sum_probs=183.3
Q ss_pred EeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchh
Q psy10942 114 VTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEW 193 (537)
Q Consensus 114 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 193 (537)
.+.|+.|++||+.+ .+.. .+..|...+.+++|+ |++++++++. ++. |
T Consensus 18 ~~~~~~i~~~d~~~-----------~~~~-~~~~~~~~v~~~~~s-pdg~~l~~~~-~~~----i--------------- 64 (297)
T 2ojh_A 18 GSMRSSIEIFNIRT-----------RKMR-VVWQTPELFEAPNWS-PDGKYLLLNS-EGL----L--------------- 64 (297)
T ss_dssp CCCCEEEEEEETTT-----------TEEE-EEEEESSCCEEEEEC-TTSSEEEEEE-TTE----E---------------
T ss_pred CCcceeEEEEeCCC-----------Ccee-eeccCCcceEeeEEC-CCCCEEEEEc-CCe----E---------------
Confidence 35689999999988 4443 566688889999999 7888887764 444 8
Q ss_pred hHHHHHHHHHhhhccc-cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccC--CCcceeccccccCCCccccc
Q psy10942 194 FDKTFERILEAKFKQS-SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSM--EPSTLEELEKRKTYHFPLFG 268 (537)
Q Consensus 194 ~~~~wd~~~~~~~~~~-~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~--d~~i~~~iw~~~~~~~~~~~ 268 (537)
.+||+ .+ ++.. .. ++. ...+.++ +|+|++++|++++. ++... +|.++
T Consensus 65 --~~~d~-------~~~~~~~~~~~-----~~~-~~~~~~~---~~spdg~~l~~~~~~~~~~~~--l~~~~-------- 116 (297)
T 2ojh_A 65 --YRLSL-------AGDPSPEKVDT-----GFA-TICNNDH---GISPDGALYAISDKVEFGKSA--IYLLP-------- 116 (297)
T ss_dssp --EEEES-------SSCCSCEECCC-----TTC-CCBCSCC---EECTTSSEEEEEECTTTSSCE--EEEEE--------
T ss_pred --EEEeC-------CCCCCceEecc-----ccc-cccccce---EECCCCCEEEEEEeCCCCcce--EEEEE--------
Confidence 99998 76 5554 33 330 3678889 99999999998873 34455 54443
Q ss_pred ccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEE-EEeCCCcEEEE
Q psy10942 269 IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLA-SGSLDKTVKVW 347 (537)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~i~ 347 (537)
..++.. ..+.. ...+..++|+|+++.|+ ++..++.+++|
T Consensus 117 ---------------------------------~~~~~~------~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 117 ---------------------------------STGGTP------RLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp ---------------------------------TTCCCC------EECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred ---------------------------------CCCCce------EEeec-CCCccceEECCCCCEEEEEECCCCceEEE
Confidence 222221 11111 22478899999999887 67788888888
Q ss_pred EccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE
Q psy10942 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL 427 (537)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 427 (537)
++.........+. .+.. .+.+++|+|++++|
T Consensus 157 ~~~~~~~~~~~~~--------------------------------~~~~-----------------~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 157 SMDIDSGVETRLT--------------------------------HGEG-----------------RNDGPDYSPDGRWI 187 (297)
T ss_dssp EEETTTCCEEECC--------------------------------CSSS-----------------CEEEEEECTTSSEE
T ss_pred EEECCCCcceEcc--------------------------------cCCC-----------------ccccceECCCCCEE
Confidence 8752222111111 1111 67788999999988
Q ss_pred EEEe-CCCcEEEEECC-CceeeeEeecCCcceEEEEEecCCCEEEEEeCC-----------CcEEEEECCCCeeE--EEe
Q psy10942 428 ISSS-GDATIKLWCLT-DYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-----------GLLKLWSIKTSTCV--STF 492 (537)
Q Consensus 428 ~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----------g~v~vwd~~~~~~~--~~~ 492 (537)
+.++ .++.+++|++. .+..+..+..|...+..++|+|++++|++++.+ +.|++||+.+++.. ..+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL 267 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence 8766 58899999886 456667777788889999999999999988776 56999999888654 344
Q ss_pred cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942 493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP 532 (537)
Q Consensus 493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg 532 (537)
.+|...+ ..+ +|+|++++|++++.|.
T Consensus 268 ~~~~~~~-----------~~~---~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 268 FGGQGTM-----------NSP---NWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EESTTTS-----------CSC---CBCTTSSEEEEEEECC
T ss_pred CCCCccc-----------ccc---eECCCCCEEEEEEecc
Confidence 4777778 888 9999999999887654
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=1.7e-22 Score=189.42 Aligned_cols=313 Identities=11% Similarity=0.063 Sum_probs=195.4
Q ss_pred CcEEEEEeCccceEEeeecc-ce--ehhhhcCCCcceEEEEEeccccEEEEEeCC-ceEEEEecccccCcccccccccce
Q psy10942 66 GKTFVLAGGEKSLLHYYETS-AV--KELYQHGLSSPLVRIVRSSVKRMYAVVTAD-HNISLYRLNSETGLEERPNKILKF 141 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~-~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~ 141 (537)
+..++++.+.++.|++||+. ++ +.+..+.....+..++|+|+|++|++++.+ +.|.+|+++.... ....
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-------~~~~ 76 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-------ALTF 76 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC-------CEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC-------ceee
Confidence 33445555789999999995 33 445555566789999999999999988886 8999999982100 0233
Q ss_pred eEEeecchhhhhhhhcccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccc
Q psy10942 142 RKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERL 220 (537)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~ 220 (537)
+..+..+. .+..++|+ ++++.++++.. ++. | .+||+ ..+.........
T Consensus 77 ~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~----i-----------------~~~d~-------~~~~~~~~~~~~- 125 (343)
T 1ri6_A 77 AAESALPG-SLTHISTD-HQGQFVFVGSYNAGN----V-----------------SVTRL-------EDGLPVGVVDVV- 125 (343)
T ss_dssp EEEEECSS-CCSEEEEC-TTSSEEEEEETTTTE----E-----------------EEEEE-------ETTEEEEEEEEE-
T ss_pred ccccccCC-CCcEEEEc-CCCCEEEEEecCCCe----E-----------------EEEEC-------CCCccccccccc-
Confidence 44555444 68899999 67777766543 333 8 88887 422211000000
Q ss_pred cCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV 299 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i 299 (537)
.. ...+.++ +|+|+++++++++ .++.+. +|++.... .+..
T Consensus 126 ~~--~~~~~~~---~~s~dg~~l~~~~~~~~~v~--~~d~~~~~--------------------------------~~~~ 166 (343)
T 1ri6_A 126 EG--LDGCHSA---NISPDNRTLWVPALKQDRIC--LFTVSDDG--------------------------------HLVA 166 (343)
T ss_dssp CC--CTTBCCC---EECTTSSEEEEEEGGGTEEE--EEEECTTS--------------------------------CEEE
T ss_pred cC--CCCceEE---EECCCCCEEEEecCCCCEEE--EEEecCCC--------------------------------ceee
Confidence 22 3457788 8999998777665 677777 77776411 0100
Q ss_pred EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccC-Ccee--eEEEEecCCCCEEEEEcCCC
Q psy10942 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTG-GLKL--LNVLRGHKKGTQIVSTGADG 375 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~-~~~~--~~~~~~~~~~~~l~~~~~d~ 375 (537)
... ..........+.+++|+|+++++++++ .++.|.+|++.. ..+. ...+...+.
T Consensus 167 ~~~----------~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~----------- 225 (343)
T 1ri6_A 167 QDP----------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE----------- 225 (343)
T ss_dssp EEE----------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT-----------
T ss_pred ecc----------cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc-----------
Confidence 000 000011224577899999999776655 789999999962 1111 111110000
Q ss_pred cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECC----CceeeeEe
Q psy10942 376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLT----DYVCLKSL 450 (537)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~----~~~~~~~~ 450 (537)
.+.. ...+..++|+|++++|+++. .++.|.+||+. +.+.+..+
T Consensus 226 -----------------~~~~---------------~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 226 -----------------NFSD---------------TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp -----------------TCCS---------------CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred -----------------cccc---------------cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence 0000 00566799999998887554 78999999998 34555566
Q ss_pred ecCCcceEEEEEecCCCEEEEEe-CCCcEEEE--ECCCCee--EEEecCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942 451 EGHDASVLRCHFINKGTQIVSTG-ADGLLKLW--SIKTSTC--VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC 524 (537)
Q Consensus 451 ~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vw--d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 524 (537)
..+.. +..++|+|++++|++++ .++.|.+| |..+++. +..+.... .. .++ +|.|+.+.
T Consensus 274 ~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~-~p-----------~~i---~~~~~~~~ 336 (343)
T 1ri6_A 274 PTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQ-GP-----------MWV---VVNAHEGG 336 (343)
T ss_dssp ECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSS-SC-----------CEE---EEEEEC--
T ss_pred cCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCC-CC-----------eeE---EEEcccCC
Confidence 65544 88999999999988887 57999999 5456643 33333322 22 566 88876553
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=5.2e-23 Score=188.59 Aligned_cols=258 Identities=12% Similarity=0.063 Sum_probs=181.5
Q ss_pred eCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc-ccCcccccccccceeEEeecc-hh
Q psy10942 73 GGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS-ETGLEERPNKILKFRKQFVGF-SD 150 (537)
Q Consensus 73 ~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 150 (537)
.+.++.|++||+.+++......+.+.|.+++|+|||++|++++ ++.|++||+.+ + +......++ ..
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~-----------~~~~~~~~~~~~ 85 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP-----------SPEKVDTGFATI 85 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC-----------SCEECCCTTCCC
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC-----------CceEeccccccc
Confidence 4678999999999988776666667999999999999999976 68999999987 4 223334444 35
Q ss_pred hhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEE
Q psy10942 151 EILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVT 229 (537)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~ 229 (537)
.+.+++|+ ++++.++++....+ +.. .+|.+.. .+.... +. .+ ..+.
T Consensus 86 ~~~~~~~s-pdg~~l~~~~~~~~--~~~-----------------~l~~~~~-----~~~~~~~~~-----~~---~~~~ 132 (297)
T 2ojh_A 86 CNNDHGIS-PDGALYAISDKVEF--GKS-----------------AIYLLPS-----TGGTPRLMT-----KN---LPSY 132 (297)
T ss_dssp BCSCCEEC-TTSSEEEEEECTTT--SSC-----------------EEEEEET-----TCCCCEECC-----SS---SSEE
T ss_pred cccceEEC-CCCCEEEEEEeCCC--Ccc-----------------eEEEEEC-----CCCceEEee-----cC---CCcc
Confidence 68999999 78888887774432 224 4444300 333333 33 33 3488
Q ss_pred EEeccCcccCCCeee-eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee
Q psy10942 230 LLERGKTVKEEDLFP-RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL 308 (537)
Q Consensus 230 ~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~ 308 (537)
.+ +|+|++++|+ ++..++.+. +|+++.. ++.
T Consensus 133 ~~---~~spdg~~l~~~~~~~~~~~--l~~~~~~-----------------------------------------~~~-- 164 (297)
T 2ojh_A 133 WH---GWSPDGKSFTYCGIRDQVFD--IYSMDID-----------------------------------------SGV-- 164 (297)
T ss_dssp EE---EECTTSSEEEEEEEETTEEE--EEEEETT-----------------------------------------TCC--
T ss_pred ce---EECCCCCEEEEEECCCCceE--EEEEECC-----------------------------------------CCc--
Confidence 88 9999998877 566667777 6665431 111
Q ss_pred eeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942 309 LNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC 387 (537)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 387 (537)
...+..+...+.+++|+|+++.|++++ .++.+++|++.........+.
T Consensus 165 ----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~--------------------------- 213 (297)
T 2ojh_A 165 ----ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT--------------------------- 213 (297)
T ss_dssp ----EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---------------------------
T ss_pred ----ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---------------------------
Confidence 111234566789999999999888766 488888888762222222221
Q ss_pred eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----------CcEEEEECCCcee--eeEeecCC
Q psy10942 388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----------ATIKLWCLTDYVC--LKSLEGHD 454 (537)
Q Consensus 388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~i~d~~~~~~--~~~~~~~~ 454 (537)
.+.. .+..++|+|++++|++++.+ +.|.+||+.+++. +..+.+|.
T Consensus 214 -----~~~~-----------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 214 -----DSAY-----------------GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp -----CCSE-----------------EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred -----cCCc-----------------ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 1111 67778999999999888765 5699999988755 44455788
Q ss_pred cceEEEEEecCCCEEEEEeCCC
Q psy10942 455 ASVLRCHFINKGTQIVSTGADG 476 (537)
Q Consensus 455 ~~v~~~~~s~~~~~l~s~~~dg 476 (537)
..+..++|+|++++|++++.+.
T Consensus 272 ~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 272 GTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccceECCCCCEEEEEEecc
Confidence 8999999999999999887653
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=4e-22 Score=186.44 Aligned_cols=301 Identities=10% Similarity=0.037 Sum_probs=200.9
Q ss_pred EEEEEeCccceEEeeeccceehhhhcCCCc---ceEEEEEeccccEEEE-EeCCceEEEEecccccCcccccccccceeE
Q psy10942 68 TFVLAGGEKSLLHYYETSAVKELYQHGLSS---PLVRIVRSSVKRMYAV-VTADHNISLYRLNSETGLEERPNKILKFRK 143 (537)
Q Consensus 68 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 143 (537)
.++++++.++.|.+||+.+++.+..+.... .+..++|+|+|+++++ +..++.|.+||+.+ ++.+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-----------~~~~~ 70 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-----------GETLG 70 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-----------CCEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC-----------CCeEe
Confidence 478888889999999999999888777655 6899999999987654 45578999999988 55555
Q ss_pred Eeec-c----hhhhhhhhcccCCCccEEEeeecc------c--cCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc
Q psy10942 144 QFVG-F----SDEILDIALLGEEDSHIVVASNEY------L--NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS 210 (537)
Q Consensus 144 ~~~~-~----~~~v~~~~~~~~~~~~l~~~~~~~------~--~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~ 210 (537)
.+.. + ...+..++|+ ++++.++++.... . ..+.| .+||. .++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~i-----------------~v~d~-------~~~ 125 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALS-PDGKTLAIYESPVRLELTHFEVQPTRV-----------------ALYDA-------ETL 125 (337)
T ss_dssp EEECCBTTEEEECTTCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEE-----------------EEEET-------TTT
T ss_pred eEEcCCcccccccccceEEC-CCCCEEEEEecccccccccccccCceE-----------------EEEEC-------CCC
Confidence 5543 1 2357899999 7777777765210 0 01337 88888 666
Q ss_pred ccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEE
Q psy10942 211 SQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLA 289 (537)
Q Consensus 211 ~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 289 (537)
+.. .. .. ...+.++ +|+|++++++++ ++.+. +|++..+.
T Consensus 126 ~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~--~~~i~--~~d~~~~~-------------------------- 165 (337)
T 1pby_B 126 SRRKAF-----EA--PRQITML---AWARDGSKLYGL--GRDLH--VMDPEAGT-------------------------- 165 (337)
T ss_dssp EEEEEE-----EC--CSSCCCE---EECTTSSCEEEE--SSSEE--EEETTTTE--------------------------
T ss_pred cEEEEE-----eC--CCCccee---EECCCCCEEEEe--CCeEE--EEECCCCc--------------------------
Confidence 554 21 22 3456778 899999888777 46777 77776521
Q ss_pred EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEE--EEEccCCceeeEEEEecCCCCE
Q psy10942 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK--VWSTTGGLKLLNVLRGHKKGTQ 367 (537)
Q Consensus 290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~--i~d~~~~~~~~~~~~~~~~~~~ 367 (537)
.+..+... .+..+ +.|+|+++.++..+.++... +|.... ...+..
T Consensus 166 ------~~~~~~~~--------------~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~----------~~~~~~ 212 (337)
T 1pby_B 166 ------LVEDKPIQ--------------SWEAE---TYAQPDVLAVWNQHESSGVMATPFYTAR----------KDIDPA 212 (337)
T ss_dssp ------EEEEECST--------------TTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEB----------TTSCTT
T ss_pred ------Eeeeeecc--------------ccCCC---ceeCCCccEEeeeccCCCceeeeeeccc----------cccccc
Confidence 00111110 00111 25788888776655444332 221110 000000
Q ss_pred EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee
Q psy10942 368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL 447 (537)
Q Consensus 368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 447 (537)
.. ......|.+||+.+++.. .+.. .+.. ..+..++|+|++++++++ ++.|.+||+.+++.+
T Consensus 213 ~~-~~~~~~v~~~d~~~~~~~-~~~~----------~~~~-----~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 213 DP-TAYRTGLLTMDLETGEMA-MREV----------RIMD-----VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI 273 (337)
T ss_dssp SG-GGEEEEEEEEETTTCCEE-EEEE----------EECS-----SCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred cc-cccccceEEEeCCCCCce-Eeec----------CCCC-----CceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence 00 001125788888877654 2111 0100 156779999999999988 689999999999888
Q ss_pred eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc
Q psy10942 448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 497 (537)
Q Consensus 448 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 497 (537)
..+..+ ..+.+++|+|++++|++++.++.|++||+.+++.+..+..+..
T Consensus 274 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 274 KRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp EEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred ceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 887743 4678999999999999999999999999999999988876543
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=4.6e-21 Score=180.50 Aligned_cols=274 Identities=10% Similarity=-0.003 Sum_probs=192.8
Q ss_pred cceEEEEEeccccEEEEEeC-------CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942 97 SPLVRIVRSSVKRMYAVVTA-------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
..+..++|+|++++|++++. ++.|.+||..+ ++....+... ..+..++|+ ++++.++++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~-----------~~~~~~~~~~-~~~~~~~~s-~dg~~l~v~~ 107 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT-----------LEVTQAIHND-LKPFGATIN-NTTQTLWFGN 107 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT-----------CCEEEEEEES-SCCCSEEEE-TTTTEEEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC-----------CeEEEEEecC-CCcceEEEC-CCCCEEEEEe
Confidence 56889999999999888773 57899999998 6666666643 347889999 6777665544
Q ss_pred eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCC-------cCeEEEEeccCcccCC
Q psy10942 170 NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDE-------LKTVTLLERGKTVKEE 240 (537)
Q Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~-------~~~v~~~~~~~~s~~~ 240 (537)
.. + +.| .+||. .+++.. +. .+.. ...+.++ +|+|++
T Consensus 108 ~~-~--~~v-----------------~~~d~-------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~s~dg 152 (353)
T 3vgz_A 108 TV-N--SAV-----------------TAIDA-------KTGEVKGRLV-----LDDRKRTEEVRPLQPREL---VADDAT 152 (353)
T ss_dssp TT-T--TEE-----------------EEEET-------TTCCEEEEEE-----SCCCCCCSSCCCCEEEEE---EEETTT
T ss_pred cC-C--CEE-----------------EEEeC-------CCCeeEEEEe-----cCCCccccccCCCCCceE---EECCCC
Confidence 32 1 338 88888 666654 33 2200 1126778 888988
Q ss_pred Ceeeecc--CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942 241 DLFPRQS--MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG 318 (537)
Q Consensus 241 ~~l~~~~--~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 318 (537)
++++++. .++.+ .+||..+++.... +..
T Consensus 153 ~~l~~~~~~~~~~i---------------------------------------------~~~d~~~~~~~~~-----~~~ 182 (353)
T 3vgz_A 153 NTVYISGIGKESVI---------------------------------------------WVVDGGNIKLKTA-----IQN 182 (353)
T ss_dssp TEEEEEEESSSCEE---------------------------------------------EEEETTTTEEEEE-----ECC
T ss_pred CEEEEEecCCCceE---------------------------------------------EEEcCCCCceEEE-----ecC
Confidence 8766544 23444 4444444433211 122
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 398 (537)
Q Consensus 319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 398 (537)
+...+.+++|+|+++++++++.++.|.+||+. ..+....+..... .+..
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~----------------------------~~~~-- 231 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTA-DNKILSRKKLLDD----------------------------GKEH-- 231 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETT-TTEEEEEEECCCS----------------------------SSCC--
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECC-CCeEEEEEEcCCC----------------------------CCCc--
Confidence 33346788999999999999999999999988 5555544433111 0110
Q ss_pred EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCC
Q psy10942 399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADG 476 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg 476 (537)
.+..++|+|+++++++++. ++.|.+||..+++.+..+.... ...++|+|+++++++++ .++
T Consensus 232 ---------------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 232 ---------------FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAG 294 (353)
T ss_dssp ---------------CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTT
T ss_pred ---------------ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCC
Confidence 5677899999997777665 4899999999999888887543 26799999999766655 689
Q ss_pred cEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942 477 LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS 531 (537)
Q Consensus 477 ~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d 531 (537)
.|.+||..+++.+..+..+. .+ ..+ +|+|||++|+++..+
T Consensus 295 ~v~~~d~~~~~~~~~~~~~~-~~-----------~~~---~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 295 KVSVIDAKSYKVVKTFDTPT-HP-----------NSL---ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETTTTEEEEEEECCS-EE-----------EEE---EECTTSCEEEEEEEC
T ss_pred eEEEEECCCCeEEEEEecCC-CC-----------CeE---EEcCCCCEEEEEEcc
Confidence 99999999999888876544 45 778 999999988777655
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=3.5e-21 Score=180.52 Aligned_cols=309 Identities=10% Similarity=0.044 Sum_probs=193.0
Q ss_pred ceEEEecCcceEEEEEcC-cc--ceeeeeccccccceeeeEeecCccccccCCcEEEEEeCcc-ceEEeeecc--cee--
Q psy10942 17 EFSVHCGRDKVLFTWDLS-SR--KQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEK-SLLHYYETS--AVK-- 88 (537)
Q Consensus 17 ~~l~s~~~~g~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~wd~~--~~~-- 88 (537)
..+++++.++.|++||+. ++ +.+..++....+..+ .+.| +++++++++.+ +.|.+|++. +++
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~sp--------dg~~l~~~~~~~~~v~~~~~~~~~~~~~ 75 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPM--VVSP--------DKRYLYVGVRPEFRVLAYRIAPDDGALT 75 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCE--EECT--------TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceE--EECC--------CCCEEEEeecCCCeEEEEEecCCCCcee
Confidence 344555889999999995 34 344455566666666 5688 55666666555 899999997 444
Q ss_pred hhhhcCCCcceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942 89 ELYQHGLSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV 167 (537)
Q Consensus 89 ~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 167 (537)
.+..+..++.+..++|+|+|++|++++. ++.|.+||+..+. ..+....+..+. .+.+++|+ ++++.+++
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~-~~~~~~~s-~dg~~l~~ 145 (343)
T 1ri6_A 76 FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL--------PVGVVDVVEGLD-GCHSANIS-PDNRTLWV 145 (343)
T ss_dssp EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE--------EEEEEEEECCCT-TBCCCEEC-TTSSEEEE
T ss_pred eccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc--------cccccccccCCC-CceEEEEC-CCCCEEEE
Confidence 3445555568999999999998877765 7889999994210 034555555444 48899999 67777766
Q ss_pred ee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-ccccccc--cccccCCCcCeEEEEeccCcccCCCee
Q psy10942 168 AS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQKHN--TERLGRDELKTVTLLERGKTVKEEDLF 243 (537)
Q Consensus 168 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~l~~--~~~~~h~~~~~v~~~~~~~~s~~~~~l 243 (537)
+. .++. | .+||+ .+ ++..... ...... ...+..+ +|+|+++++
T Consensus 146 ~~~~~~~----v-----------------~~~d~-------~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~pdg~~l 192 (343)
T 1ri6_A 146 PALKQDR----I-----------------CLFTV-------SDDGHLVAQDPAEVTTVE--GAGPRHM---VFHPNEQYA 192 (343)
T ss_dssp EEGGGTE----E-----------------EEEEE-------CTTSCEEEEEEEEEECST--TCCEEEE---EECTTSSEE
T ss_pred ecCCCCE----E-----------------EEEEe-------cCCCceeeecccccccCC--CCCcceE---EECCCCCEE
Confidence 65 4444 8 88988 54 3322100 000112 3467888 999999976
Q ss_pred ee-ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEE-CCCCceeeeeecccccccCC
Q psy10942 244 PR-QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWS-TTGGLKLLNVLRGHKKGHEK 321 (537)
Q Consensus 244 ~~-~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~-~~~~~~~~~~~~~~~~~~~~ 321 (537)
+. +..++.+. +|++......... +.... +... .....
T Consensus 193 ~~~~~~~~~i~--~~~~~~~~g~~~~----------------------------~~~~~~~~~~-----------~~~~~ 231 (343)
T 1ri6_A 193 YCVNELNSSVD--VWELKDPHGNIEC----------------------------VQTLDMMPEN-----------FSDTR 231 (343)
T ss_dssp EEEETTTTEEE--EEESSCTTSCCEE----------------------------EEEEECSCTT-----------CCSCC
T ss_pred EEEeCCCCEEE--EEEecCCCCcEEE----------------------------EeeccccCcc-----------ccccC
Confidence 54 44778888 8888642111000 00001 0000 01134
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942 322 DINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT 400 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 400 (537)
.+..++|+|++++|+++. .++.|.+||+.........+. .+..+.
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~-----------------------------~~~~~~----- 277 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG-----------------------------FQPTET----- 277 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE-----------------------------EEECSS-----
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee-----------------------------eecCCC-----
Confidence 577899999999887554 789999999872111111110 000000
Q ss_pred EEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEEC--CCce--eeeEeecCCcceEEEEEecCCC
Q psy10942 401 LAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCL--TDYV--CLKSLEGHDASVLRCHFINKGT 467 (537)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~~--~~~~~~~~~~~v~~~~~s~~~~ 467 (537)
.+..++|+|++++|++++ .++.|.+|++ .+++ .+..+... ....+++|.|+.+
T Consensus 278 -------------~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 278 -------------QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp -------------SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred -------------ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence 456688999999888887 5799999954 4553 34444432 4467788887543
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=4.4e-21 Score=178.89 Aligned_cols=276 Identities=12% Similarity=0.060 Sum_probs=181.3
Q ss_pred EEEeccccE-EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee-ccccCCccc
Q psy10942 102 IVRSSVKRM-YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNGGDLS 179 (537)
Q Consensus 102 ~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~~~i~ 179 (537)
..|.+++++ +++.+.++.|.+||..+ ++....+..+...+ .++|+ +++++++++.. +.. |
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~-~~~~s-~dg~~l~~~~~~~~~----i- 64 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDT-----------LEILNQITLGYDFV-DTAIT-SDCSNVVVTSDFCQT----L- 64 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTT-----------CCEEEEEECCCCEE-EEEEC-SSSCEEEEEESTTCE----E-
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcc-----------cceeeeEEccCCcc-eEEEc-CCCCEEEEEeCCCCe----E-
Confidence 346666555 66777889999999998 66666766665556 99999 67776666554 334 8
Q ss_pred ceeecccCCCcchhhHHHHHHHHHhhhcccccc-c--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCC---cce
Q psy10942 180 GLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ-Q--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP---STL 253 (537)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~-~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~---~i~ 253 (537)
.+||. .+++. . +. .+ ..+..++ +|+|+|++++++..++ .+.
T Consensus 65 ----------------~~~d~-------~~~~~~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 65 ----------------VQIET-------QLEPPKVVAIQ-----EG--QSSMADV---DITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp ----------------EEEEC-------SSSSCEEEEEE-----EC--SSCCCCE---EECTTSSEEEECCCSSSSCEEE
T ss_pred ----------------EEEEC-------CCCceeEEecc-----cC--CCCccce---EECCCCCEEEEecCCCCcccEE
Confidence 88888 76665 3 44 45 5555558 8999999888544432 455
Q ss_pred eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942 254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK 333 (537)
Q Consensus 254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 333 (537)
+|++.. ++.... +. +.....+++|+|+|+
T Consensus 112 --v~d~~~-------------------------------------------~~~~~~-----~~-~~~~~~~~~~spdg~ 140 (331)
T 3u4y_A 112 --SYSFLK-------------------------------------------NKFIST-----IP-IPYDAVGIAISPNGN 140 (331)
T ss_dssp --EEETTT-------------------------------------------TEEEEE-----EE-CCTTEEEEEECTTSS
T ss_pred --EEECCC-------------------------------------------CCeEEE-----EE-CCCCccceEECCCCC
Confidence 555543 332111 11 123458999999998
Q ss_pred EEEEE-eCCCc-EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942 334 LLASG-SLDKT-VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII 411 (537)
Q Consensus 334 ~l~~~-~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 411 (537)
+++++ ..++. +.+|++...+..... .. ..+....
T Consensus 141 ~l~~~~~~~~~~i~~~~~~~~g~~~~~-~~---------------------------~~~~~~~---------------- 176 (331)
T 3u4y_A 141 GLILIDRSSANTVRRFKIDADGVLFDT-GQ---------------------------EFISGGT---------------- 176 (331)
T ss_dssp CEEEEEETTTTEEEEEEECTTCCEEEE-EE---------------------------EEECSSS----------------
T ss_pred EEEEEecCCCceEEEEEECCCCcEeec-CC---------------------------ccccCCC----------------
Confidence 65554 55588 999998833221111 00 0000000
Q ss_pred EeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCcee---eeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10942 412 TGGVWFVNFSPLDRILISSS-GDATIKLWCLTDYVC---LKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTS 486 (537)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~ 486 (537)
....++|+|+|+++++++ .++.|.+||+.+++. +..+..+ ..+..++|+|+|++|++++ .++.|.+||+.++
T Consensus 177 --~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 177 --RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp --SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred --CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 567789999999665554 688999999998887 7777744 6678999999999877665 4788999999998
Q ss_pred ee--EEEecCC----ccceeccCCCCCCccccccceeeecCCCEEEEEeC-CCCEEeC
Q psy10942 487 TC--VSTFDKH----ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW-SPQVVVY 537 (537)
Q Consensus 487 ~~--~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~vW 537 (537)
+. +..+..+ .... .....+ +|+|||++|++++. ++.|.+|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 254 TLSFVKSFGHGLLIDPRPL--------FGANQM---ALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp EEEEEEEEECCCCCCCGGG--------TTCCCE---EECTTSSEEEEEETTTTEEEEE
T ss_pred ceeeecccccccccCCCCc--------ccccce---EECCCCCEEEEecCCCCcEEEE
Confidence 87 4443322 2222 000235 99999999876655 5688887
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=7e-22 Score=204.41 Aligned_cols=354 Identities=11% Similarity=0.042 Sum_probs=207.5
Q ss_pred eeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccc----cceeeeEeecCccccccCCcEEEEEeCc-------
Q psy10942 7 CFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYES----LETCAVFHLSDETESKSGGKTFVLAGGE------- 75 (537)
Q Consensus 7 ~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 75 (537)
.+.|+ +|+++++++ .|+.|++||+++++....+..... +..+ .++| ++++|+.++.
T Consensus 20 ~~~~s--~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~Sp--------Dg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWI--SGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNY--GLSP--------DRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEES--SSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEE--EECT--------TSSEEEEEEEEEECSSS
T ss_pred ccEEC--CCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeE--EECC--------CCCeEEEEecCceeEEe
Confidence 56788 888766655 589999999999998776653322 5555 6688 6677777765
Q ss_pred --cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhh-
Q psy10942 76 --KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI- 152 (537)
Q Consensus 76 --~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 152 (537)
++.|++||+.+++.+......+.+..++|||||++||++. ++.|++||+.+++....... +.....+.++...|
T Consensus 87 s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~--~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN--GRENKIFNGIPDWVY 163 (719)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC--CBTTTEEESSCCHHH
T ss_pred ecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC--CCcCCeEccccccee
Confidence 6899999999988743223336789999999999999986 68999999987421100000 00000122333333
Q ss_pred --------hhhhcccCCCccEEEeeeccccCCcccceeec-------------------ccCCCcchhhHHHHHHHHHhh
Q psy10942 153 --------LDIALLGEEDSHIVVASNEYLNGGDLSGLVKL-------------------GANRSHNEWFDKTFERILEAK 205 (537)
Q Consensus 153 --------~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~-------------------~~~~~~~~~~~~~wd~~~~~~ 205 (537)
.+++|+ ||++.|++++.+... + ..+.+ +..... .. .++||+
T Consensus 164 ~ee~~~~~~~~~wS-PDG~~la~~~~d~~~---~-~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~-~~-l~~~d~----- 231 (719)
T 1z68_A 164 EEEMLATKYALWWS-PNGKFLAYAEFNDTD---I-PVIAYSYYGDEQYPRTINIPYPKAGAKNPV-VR-IFIIDT----- 231 (719)
T ss_dssp HHHTTCSSCCEEEC-TTSSEEEEEEEECTT---S-CEEEEEECCSSSSCEEEEEECCBTTSCCCE-EE-EEEEES-----
T ss_pred eeecccCcccEEEC-CCCCEEEEEEECCCC---C-ceEEeeccCCCCCccceeecCCCCCCCCCe-eE-EEEEEC-----
Confidence 489999 888999887765320 1 00000 000000 00 057777
Q ss_pred hcccccc----ccc-ccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeee
Q psy10942 206 FKQSSSQ----QKH-NTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFY 280 (537)
Q Consensus 206 ~~~~~~~----~l~-~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~ 280 (537)
.+++. .+. ...+.+| ...+..+ +|+||++++++....+.-
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~SpD~~~~~~~~~~~~~---------------------------- 276 (719)
T 1z68_A 232 --TYPAYVGPQEVPVPAMIASS--DYYFSWL---TWVTDERVCLQWLKRVQN---------------------------- 276 (719)
T ss_dssp --SCHHHHCCEECCCCHHHHTS--CEEEEEE---EESSSSEEEEEEEESSTT----------------------------
T ss_pred --CCCCccceeEccCCccCCCC--cceEEEe---EEeCCCeEEEEEeccccC----------------------------
Confidence 55443 111 0112268 8889999 999998766653221110
Q ss_pred eCCcceEEEEEeCCCeEEEEE----CCCCceeeeeecccc----cccCCCeE-----EEEEcCCCCEEEE--EeCCCc--
Q psy10942 281 TGGTVELLASGSLDKTVKVWS----TTGGLKLLNVLRGHK----KGHEKDIN-----CVTVSPNDKLLAS--GSLDKT-- 343 (537)
Q Consensus 281 ~~~~v~~l~~~~~d~~i~i~~----~~~~~~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~l~~--~~~d~~-- 343 (537)
...|.+|| ..+++. .... ..|...+. .+.|+|||+.++. ...+|.
T Consensus 277 -------------~~~l~~~d~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~ 338 (719)
T 1z68_A 277 -------------VSVLSICDFREDWQTWDC-----PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKH 338 (719)
T ss_dssp -------------EEEEEEEEECSSSSSEEC-----CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEE
T ss_pred -------------eEEEEEEcccCCCCCCce-----EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceE
Confidence 01344555 443332 1112 24455555 7889999996554 444553
Q ss_pred EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942 344 VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL 423 (537)
Q Consensus 344 i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (537)
|.+||+. +++ ...+..+.. .+..+.++ +
T Consensus 339 l~~~~~~---------------------------------~~~-~~~lt~~~~-----------------~v~~~~~~-d 366 (719)
T 1z68_A 339 IHYIKDT---------------------------------VEN-AIQITSGKW-----------------EAINIFRV-T 366 (719)
T ss_dssp EEEESSC---------------------------------STT-CEECSCSSS-----------------CEEEEEEE-C
T ss_pred EEEEECC---------------------------------CCc-eEecccCce-----------------EEEEEEEE-e
Confidence 3333433 222 111111111 34444555 6
Q ss_pred CCEEEEEeCC-----CcEEEEECCC--ce-eeeEee----cCCcceEEEEEecCCCEEEEE-eCC--CcEEEEECCCCee
Q psy10942 424 DRILISSSGD-----ATIKLWCLTD--YV-CLKSLE----GHDASVLRCHFINKGTQIVST-GAD--GLLKLWSIKTSTC 488 (537)
Q Consensus 424 ~~~l~~~~~d-----g~i~i~d~~~--~~-~~~~~~----~~~~~v~~~~~s~~~~~l~s~-~~d--g~v~vwd~~~~~~ 488 (537)
++.|+..+.+ +..++|.+.. +. ....+. +|...+..+.|+|++++++.. +.+ ..+.+||+.+++.
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred CCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence 6666666554 7788887653 32 122332 256678899999999877754 333 4688999988886
Q ss_pred EEEec
Q psy10942 489 VSTFD 493 (537)
Q Consensus 489 ~~~~~ 493 (537)
+..+.
T Consensus 447 ~~~~~ 451 (719)
T 1z68_A 447 IKILE 451 (719)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 66554
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=1.3e-20 Score=177.34 Aligned_cols=281 Identities=6% Similarity=-0.026 Sum_probs=195.5
Q ss_pred eeeeccccccceeeeEeecCccccccCCcEEEEEeC-c------cceEEeeeccceehhhhcCCCcceEEEEEeccccEE
Q psy10942 39 LRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG-E------KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMY 111 (537)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l 111 (537)
+...+.......+ .+.| +++++++++ . ++.|.+||..+++.+..+.....+..++|+|+|+++
T Consensus 34 ~~~~~~~~~~~~~--~~s~--------dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 103 (353)
T 3vgz_A 34 MLRKAVGKGAYEM--AYSQ--------QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTL 103 (353)
T ss_dssp EEEEEEESSEEEE--EEET--------TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEE
T ss_pred hhhhhhccCccce--EECC--------CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEE
Confidence 3344444455555 5677 444444444 2 678999999999988888777778999999999966
Q ss_pred EEE-eCCceEEEEecccccCcccccccccceeEEeecchhh---------hhhhhcccCCCccEEEeeeccccCCcccce
Q psy10942 112 AVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE---------ILDIALLGEEDSHIVVASNEYLNGGDLSGL 181 (537)
Q Consensus 112 a~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~ 181 (537)
+++ ..++.|.+||..+ ++....+..+... +.+++|+ ++++.++++....+ +.|
T Consensus 104 ~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~--~~i--- 166 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDAKT-----------GEVKGRLVLDDRKRTEEVRPLQPRELVAD-DATNTVYISGIGKE--SVI--- 166 (353)
T ss_dssp EEEETTTTEEEEEETTT-----------CCEEEEEESCCCCCCSSCCCCEEEEEEEE-TTTTEEEEEEESSS--CEE---
T ss_pred EEEecCCCEEEEEeCCC-----------CeeEEEEecCCCccccccCCCCCceEEEC-CCCCEEEEEecCCC--ceE---
Confidence 555 4578999999998 5666666654322 5778999 67777777663322 448
Q ss_pred eecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccc
Q psy10942 182 VKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKR 259 (537)
Q Consensus 182 ~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~ 259 (537)
.+||. .+++.. +. .+ ...+.++ +|+|+++++++++.++.+. +|+.
T Consensus 167 --------------~~~d~-------~~~~~~~~~~-----~~--~~~~~~~---~~s~dg~~l~~~~~~~~i~--~~d~ 213 (353)
T 3vgz_A 167 --------------WVVDG-------GNIKLKTAIQ-----NT--GKMSTGL---ALDSEGKRLYTTNADGELI--TIDT 213 (353)
T ss_dssp --------------EEEET-------TTTEEEEEEC-----CC--CTTCCCC---EEETTTTEEEEECTTSEEE--EEET
T ss_pred --------------EEEcC-------CCCceEEEec-----CC--CCccceE---EECCCCCEEEEEcCCCeEE--EEEC
Confidence 88888 666655 33 34 5557788 8999999888888788777 7776
Q ss_pred cCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe
Q psy10942 260 KTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS 339 (537)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 339 (537)
.++. .+..+... ..++...+..++|+|+++++++++
T Consensus 214 ~~~~--------------------------------~~~~~~~~------------~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 214 ADNK--------------------------------ILSRKKLL------------DDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTTE--------------------------------EEEEEECC------------CSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCe--------------------------------EEEEEEcC------------CCCCCcccceEEECCCCCEEEEEe
Confidence 6521 01111110 112345678899999999877766
Q ss_pred CC-CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942 340 LD-KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV 418 (537)
Q Consensus 340 ~d-~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~ 418 (537)
.+ +.|.+||+. ..+.+..+... ....+
T Consensus 250 ~~~~~v~~~d~~-~~~~~~~~~~~---------------------------------------------------~~~~~ 277 (353)
T 3vgz_A 250 SKAAEVLVVDTR-NGNILAKVAAP---------------------------------------------------ESLAV 277 (353)
T ss_dssp SSSSEEEEEETT-TCCEEEEEECS---------------------------------------------------SCCCE
T ss_pred CCCCEEEEEECC-CCcEEEEEEcC---------------------------------------------------CCceE
Confidence 54 788888887 44433333211 11347
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCC
Q psy10942 419 NFSPLDRILISSS-GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG 476 (537)
Q Consensus 419 ~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 476 (537)
+|+|++++++++. .++.|.+||..+++.+..+... ..+.+++|+|++++|+++..++
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 8899998666655 6899999999999988888754 4679999999999887776654
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=1e-21 Score=197.91 Aligned_cols=261 Identities=11% Similarity=-0.018 Sum_probs=173.2
Q ss_pred cceEEEEEeccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecch-hhhhhhhcccCCCccEEEeee-ccc
Q psy10942 97 SPLVRIVRSSVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFS-DEILDIALLGEEDSHIVVASN-EYL 173 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~-~~~ 173 (537)
.+|.+++|+|||++||+++. |++++||++++ ++. +.+..|. ..+..++|+ |+ +.++++.. .++
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~-----------g~~-~~lt~~~~~~~~~~~~s-pd-~~l~~~~~~~g~ 87 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG-----------GET-VKLNREPINSVLDPHYG-VG-RVILVRDVSKGA 87 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEET-----------TEE-EECCSSCCSEECEECTT-CS-EEEEEEECSTTS
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcC-----------CCc-EeeecccccccccccCC-CC-eEEEEeccCCCC
Confidence 47999999999999999887 99999999866 343 4555555 579999999 55 54444432 122
Q ss_pred cCCcccceeecccCCCcchhhHHHHHHHHHhhhccc---ccc-cccccccccCCCcCeEEEEeccCcccCCCeee-eccC
Q psy10942 174 NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS---SSQ-QKHNTERLGRDELKTVTLLERGKTVKEEDLFP-RQSM 248 (537)
Q Consensus 174 ~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~---~~~-~l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~-~~~~ 248 (537)
... ++|.+ .. +.. .+. .. ..+... +|+|+|+.++ +...
T Consensus 88 --~~~-----------------~l~~~-------~~~~~g~~~~l~-----~~---~~~~~~---~~s~dg~~~~~~s~~ 130 (582)
T 3o4h_A 88 --EQH-----------------ALFKV-------NTSRPGEEQRLE-----AV---KPMRIL---SGVDTGEAVVFTGAT 130 (582)
T ss_dssp --CCE-----------------EEEEE-------ETTSTTCCEECT-----TS---CSBEEE---EEEECSSCEEEEEEC
T ss_pred --cce-----------------EEEEE-------eccCCCcccccc-----CC---CCceee---eeCCCCCeEEEEecC
Confidence 113 34433 21 111 121 11 122345 6677775322 2222
Q ss_pred CCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE
Q psy10942 249 EPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV 328 (537)
Q Consensus 249 d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 328 (537)
++.+. +|+ +.+++... +..+.. .+++|
T Consensus 131 ~~~~~--l~d-------------------------------------------~~~g~~~~------l~~~~~--~~~~~ 157 (582)
T 3o4h_A 131 EDRVA--LYA-------------------------------------------LDGGGLRE------LARLPG--FGFVS 157 (582)
T ss_dssp SSCEE--EEE-------------------------------------------EETTEEEE------EEEESS--CEEEE
T ss_pred CCCce--EEE-------------------------------------------ccCCcEEE------eecCCC--ceEEE
Confidence 23333 444 44333211 111122 68899
Q ss_pred cCCCCEEEEEeCC----CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEe
Q psy10942 329 SPNDKLLASGSLD----KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404 (537)
Q Consensus 329 s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 404 (537)
+|||++|++++.+ +.|++||+. +++. ..+..+. .
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~-~g~~-~~l~~~~--------------------------------~-------- 195 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLS-SGGL-RVFDSGE--------------------------------G-------- 195 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETT-TCCC-EEECCSS--------------------------------C--------
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCC-CCCc-eEeecCC--------------------------------C--------
Confidence 9999999988766 567777766 2221 1222221 1
Q ss_pred cCCCceEEeeeeEEEEcCCCCEEEEEeCCC--cEEEEECCCceeeeEeecCCcceEEEE--------EecCCCEEEEEeC
Q psy10942 405 KDENQIITGGVWFVNFSPLDRILISSSGDA--TIKLWCLTDYVCLKSLEGHDASVLRCH--------FINKGTQIVSTGA 474 (537)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~~~ 474 (537)
.+..++|||||++|+++..++ .|++||+.+++.. .+.+|...+..++ |+|||.++++++.
T Consensus 196 ---------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 196 ---------SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp ---------EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred ---------ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 667899999999999888888 8999999998877 7777877777777 9999999999999
Q ss_pred CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942 475 DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ 533 (537)
Q Consensus 475 dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~ 533 (537)
|+.+++|++ |+... .+...+ .++ +|+ |++++++++.+..
T Consensus 266 ~g~~~l~~~--g~~~~---~~~~~v-----------~~~---~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 266 EGRSAVFID--GERVE---APQGNH-----------GRV---VLW-RGKLVTSHTSLST 304 (582)
T ss_dssp TTEEEEEET--TEEEC---CCSSEE-----------EEE---EEE-TTEEEEEEEETTE
T ss_pred CCcEEEEEE--CCeec---cCCCce-----------EEE---Eec-CCEEEEEEcCCCC
Confidence 999999999 76554 233556 777 999 9999998877654
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=1.5e-20 Score=176.57 Aligned_cols=300 Identities=10% Similarity=0.000 Sum_probs=187.3
Q ss_pred eeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecccc--ccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942 6 TCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYE--SLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE 83 (537)
Q Consensus 6 ~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd 83 (537)
+.++++ +++.++++++.++.|.+||+++++.+..++... ....+ .+.|. +..++++...++.|.+||
T Consensus 3 ~g~~~~--~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~--~~s~d-------g~~~~v~~~~~~~i~~~d 71 (349)
T 1jmx_B 3 TGPALK--AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTA--MMAPD-------NRTAYVLNNHYGDIYGID 71 (349)
T ss_dssp -CCCCC--TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEE--EECTT-------SSEEEEEETTTTEEEEEE
T ss_pred cccccc--CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCcee--EECCC-------CCEEEEEeCCCCcEEEEe
Confidence 456777 889999999999999999999999988887655 45555 56774 434556667789999999
Q ss_pred ccceehhhhcCCCc-------ceEEEEEeccccEEEEEeCC------------ceEEEEecccccCcccccccccceeEE
Q psy10942 84 TSAVKELYQHGLSS-------PLVRIVRSSVKRMYAVVTAD------------HNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 84 ~~~~~~~~~~~~~~-------~v~~~~~s~~~~~la~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
+.+++.+..+.... .+..++|+|||++|++++.+ +.|.+||+.+++. .+.+..
T Consensus 72 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--------~~~~~~ 143 (349)
T 1jmx_B 72 LDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--------AKPVRT 143 (349)
T ss_dssp TTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--------BCCSEE
T ss_pred CCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--------cceeee
Confidence 99988776665322 37899999999999998865 8999999987311 122233
Q ss_pred eecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccC
Q psy10942 145 FVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGR 222 (537)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h 222 (537)
+..+ ..+.+++|+ ++++ ++++ +.+ | .+||. .+++.. +. .+
T Consensus 144 ~~~~-~~~~~~~~s-~dg~-l~~~--~~~----i-----------------~~~d~-------~~~~~~~~~~-----~~ 185 (349)
T 1jmx_B 144 FPMP-RQVYLMRAA-DDGS-LYVA--GPD----I-----------------YKMDV-------KTGKYTVALP-----LR 185 (349)
T ss_dssp EECC-SSCCCEEEC-TTSC-EEEE--SSS----E-----------------EEECT-------TTCCEEEEEC-----ST
T ss_pred ccCC-CcccceeEC-CCCc-EEEc--cCc----E-----------------EEEeC-------CCCceecccc-----cc
Confidence 3333 358888999 6666 5553 333 7 88888 555443 22 11
Q ss_pred CCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeC---------CcceEEEEEeC
Q psy10942 223 DELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG---------GTVELLASGSL 293 (537)
Q Consensus 223 ~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~l~~~~~ 293 (537)
.... .. ...|+ .+. +|........... ......... ..-.++.....
T Consensus 186 --~~~~-~~---~~~~~-----------~~~--~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 186 --NWNR-KG---YSAPD-----------VLY--FWPHQSPRHEFSM-----LYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp --TCCC-TT---BCCCB-----------CCC--CCCCCCTTCEEEE-----EEEEEEC-------CCCEEEEEEEEEETT
T ss_pred --ccCC-cc---ccCcc-----------cee--eecCCCcceeEEe-----eeeeeecCCCcCCccccccceeEEEEecc
Confidence 0000 00 00111 122 3332221100000 000000000 00011112223
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEc
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG 372 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~ 372 (537)
++.+++++.. .+...+..++|+| ++++++++ ++.|.+||+. ..+.+..+....
T Consensus 242 ~~~~~~~~~~--------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~-~~~~~~~~~~~~--------- 295 (349)
T 1jmx_B 242 TGKTHTQEFA--------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLK-QRKLIKAANLDH--------- 295 (349)
T ss_dssp TCCEEEEEEE--------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETT-TTEEEEEEECSS---------
T ss_pred CCcEEecccc--------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECc-cCeEEEEEcCCC---------
Confidence 3444444431 2445678899999 99988887 7788888887 444443332110
Q ss_pred CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec
Q psy10942 373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452 (537)
Q Consensus 373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 452 (537)
.+.+++|+|++++|++++.++.|.+||+.+++.+..++.
T Consensus 296 -----------------------------------------~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 296 -----------------------------------------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp -----------------------------------------CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred -----------------------------------------CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 456789999999888888899999999999998888765
Q ss_pred C
Q psy10942 453 H 453 (537)
Q Consensus 453 ~ 453 (537)
.
T Consensus 335 ~ 335 (349)
T 1jmx_B 335 P 335 (349)
T ss_dssp S
T ss_pred C
Confidence 4
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=4.9e-20 Score=172.98 Aligned_cols=282 Identities=10% Similarity=0.051 Sum_probs=178.5
Q ss_pred ccceEEeeecc--ceehh--hhcCCCcceEEEEEeccccEEEEEeC---CceEEEEecccccCcccccccccceeEEeec
Q psy10942 75 EKSLLHYYETS--AVKEL--YQHGLSSPLVRIVRSSVKRMYAVVTA---DHNISLYRLNSETGLEERPNKILKFRKQFVG 147 (537)
Q Consensus 75 ~~~~i~~wd~~--~~~~~--~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 147 (537)
.++.|.+|++. +++.. ........+..++|+|||+ |++++. ++.|.+|++.+++ .+.+..+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~---------~~~~~~~~~ 83 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT---------AHKLNTVVA 83 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE---------EEEEEEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc---------EEEeeeeec
Confidence 34557777664 44432 2233346788899999999 555554 6899999997621 234455556
Q ss_pred chhhhhhhhcccCCCccEEEee-eccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc-ccc-cccccccc---
Q psy10942 148 FSDEILDIALLGEEDSHIVVAS-NEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS-SQQ-KHNTERLG--- 221 (537)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~-~~~-l~~~~~~~--- 221 (537)
+...+..++|+ +++++|+++. .++. + .+|++ ... ... +......+
T Consensus 84 ~~~~p~~~a~s-pdg~~l~~~~~~~~~----v-----------------~v~~~-------~~~g~~~~~~~~~~~~~~p 134 (347)
T 3hfq_A 84 PGTPPAYVAVD-EARQLVYSANYHKGT----A-----------------EVMKI-------AADGALTLTDTVQHSGHGP 134 (347)
T ss_dssp ESCCCSEEEEE-TTTTEEEEEETTTTE----E-----------------EEEEE-------CTTSCEEEEEEEECCCCCS
T ss_pred CCCCCEEEEEC-CCCCEEEEEeCCCCE----E-----------------EEEEe-------CCCCCeeecceeecCCCCC
Confidence 77778999999 7788777765 3344 7 88887 421 111 11000001
Q ss_pred ----CCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeE
Q psy10942 222 ----RDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTV 297 (537)
Q Consensus 222 ----h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i 297 (537)
+ ...+.++ +|+|+|+.+++...++.+. +|++... +.+
T Consensus 135 ~~~~~--~~~~~~~---~~spdg~l~v~~~~~~~v~--~~~~~~~--------------------------------g~~ 175 (347)
T 3hfq_A 135 RPEQD--GSHIHYT---DLTPDNRLAVIDLGSDKVY--VYNVSDA--------------------------------GQL 175 (347)
T ss_dssp STTCS--SCCEEEE---EECTTSCEEEEETTTTEEE--EEEECTT--------------------------------SCE
T ss_pred Ccccc--CCCceEE---EECCCCcEEEEeCCCCEEE--EEEECCC--------------------------------CcE
Confidence 2 2357889 9999999666666677888 8887631 111
Q ss_pred EEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEEccCC-cee--eEEEEecCCCCEEEEEcC
Q psy10942 298 KVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS-GSLDKTVKVWSTTGG-LKL--LNVLRGHKKGTQIVSTGA 373 (537)
Q Consensus 298 ~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~-~~~--~~~~~~~~~~~~l~~~~~ 373 (537)
.... .........+..++|+|||+++++ ...++.+.+|++... .+. +..+...+.+
T Consensus 176 ~~~~------------~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-------- 235 (347)
T 3hfq_A 176 SEQS------------VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD-------- 235 (347)
T ss_dssp EEEE------------EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT--------
T ss_pred EEee------------eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC--------
Confidence 1000 000011224678999999996666 456789999998731 221 1111111110
Q ss_pred CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE-EEeCCCcEEEEECC---CceeeeE
Q psy10942 374 DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI-SSSGDATIKLWCLT---DYVCLKS 449 (537)
Q Consensus 374 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~---~~~~~~~ 449 (537)
+... ..+..++|+|||++|+ +...++.|.+|++. ..+.+..
T Consensus 236 -----------------~~~~------------------~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 236 -----------------YTAH------------------NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp -----------------CCSC------------------CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred -----------------CCCC------------------CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 0000 0577899999999875 55568999999987 3355666
Q ss_pred eecCCcceEEEEEecCCCEEEEEeCC-CcEEEE--ECCCCeeE
Q psy10942 450 LEGHDASVLRCHFINKGTQIVSTGAD-GLLKLW--SIKTSTCV 489 (537)
Q Consensus 450 ~~~~~~~v~~~~~s~~~~~l~s~~~d-g~v~vw--d~~~~~~~ 489 (537)
+..+...+..++|+|||++|++++.+ +.|.+| |..+|++.
T Consensus 281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 66666778999999999999888765 899999 55667655
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.5e-21 Score=201.93 Aligned_cols=336 Identities=10% Similarity=0.015 Sum_probs=206.5
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCCcc----eEEEEEeccccEEEEEeC---------CceEEEEecccccCcc
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSP----LVRIVRSSVKRMYAVVTA---------DHNISLYRLNSETGLE 132 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~----v~~~~~s~~~~~la~~~~---------d~~i~iwd~~~~~~~~ 132 (537)
++.+++++ .++.|++||+.+++....+..+.. +.+++|||||++||+++. ++.|++||+.++
T Consensus 26 dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g---- 100 (719)
T 1z68_A 26 GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG---- 100 (719)
T ss_dssp SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT----
T ss_pred CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC----
Confidence 55666655 589999999999987766665533 899999999999999876 789999999983
Q ss_pred ccccccccee--EEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccc
Q psy10942 133 ERPNKILKFR--KQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSS 210 (537)
Q Consensus 133 ~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~ 210 (537)
+.+ ..+ ...+..++|+ |+++.|+++. ++. | ++|++ .++
T Consensus 101 -------~~~~~~~l---~~~~~~~~~S-PDG~~la~~~-~~~----i-----------------~~~~~-------~~g 140 (719)
T 1z68_A 101 -------EFVRGNEL---PRPIQYLCWS-PVGSKLAYVY-QNN----I-----------------YLKQR-------PGD 140 (719)
T ss_dssp -------EECCSSCC---CSSBCCEEEC-SSTTCEEEEE-TTE----E-----------------EEESS-------TTS
T ss_pred -------ccccceec---CcccccceEC-CCCCEEEEEE-CCe----E-----------------EEEeC-------CCC
Confidence 331 122 2358889999 7888888764 445 8 99998 666
Q ss_pred ccc-ccccccccCCCcCeE-----------------EEEeccCcccCCCeeeeccCC-CcceeccccccCCCcccccccc
Q psy10942 211 SQQ-KHNTERLGRDELKTV-----------------TLLERGKTVKEEDLFPRQSME-PSTLEELEKRKTYHFPLFGIFV 271 (537)
Q Consensus 211 ~~~-l~~~~~~~h~~~~~v-----------------~~~~~~~~s~~~~~l~~~~~d-~~i~~~iw~~~~~~~~~~~~~~ 271 (537)
+.. +.. .++ ...| .++ +|||||++|++++.| +.+. +|.+....... .
T Consensus 141 ~~~~l~~---~~~--~~~v~~g~~~~v~~ee~~~~~~~~---~wSPDG~~la~~~~d~~~~~--~~~~~~~~~~~----~ 206 (719)
T 1z68_A 141 PPFQITF---NGR--ENKIFNGIPDWVYEEEMLATKYAL---WWSPNGKFLAYAEFNDTDIP--VIAYSYYGDEQ----Y 206 (719)
T ss_dssp CCEECCC---CCB--TTTEEESSCCHHHHHHTTCSSCCE---EECTTSSEEEEEEEECTTSC--EEEEEECCSSS----S
T ss_pred CcEEEec---CCC--cCCeEcccccceeeeecccCcccE---EECCCCCEEEEEEECCCCCc--eEEeeccCCCC----C
Confidence 554 220 022 2222 478 999999999988765 5566 66543321110 0
Q ss_pred cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee--eeee-cccccccCCCeEEEEEcCCCCEEEEEeCCC----cE
Q psy10942 272 PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL--LNVL-RGHKKGHEKDINCVTVSPNDKLLASGSLDK----TV 344 (537)
Q Consensus 272 ~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~--~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i 344 (537)
+....+.....+. ......|++||+.+++.. ..+. ...+..|...+..++|+||++++++....+ .|
T Consensus 207 ~~~~~~~yp~~g~------~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 207 PRTINIPYPKAGA------KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CEEEEEECCBTTS------CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred ccceeecCCCCCC------CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 0011111111100 012247899999887631 1110 023456788899999999987776643222 25
Q ss_pred EEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee----ccCCcceEEEEEecCCCceEEeeee----
Q psy10942 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF----DKHALKIWTLAITKDENQIITGGVW---- 416 (537)
Q Consensus 345 ~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~i~---- 416 (537)
.+||+... ..+++....+ ..+.. .+.
T Consensus 281 ~~~d~~~~-----------------------------~~~g~~~~~~~~~~~~~~~-----------------~~~~~~~ 314 (719)
T 1z68_A 281 SICDFRED-----------------------------WQTWDCPKTQEHIEESRTG-----------------WAGGFFV 314 (719)
T ss_dssp EEEEECSS-----------------------------SSSEECCGGGEEEEECSSS-----------------CSSSSSC
T ss_pred EEEcccCC-----------------------------CCCCceEEEEecccccCCc-----------------eEccccC
Confidence 66661100 2222222111 11211 222
Q ss_pred -EEEEcCCCCEEEE--EeCCC--cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCC-
Q psy10942 417 -FVNFSPLDRILIS--SSGDA--TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKT- 485 (537)
Q Consensus 417 -~~~~s~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~- 485 (537)
.++|+|||+.++. ...+| .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+ +..++|.+..
T Consensus 315 ~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 315 STPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp CCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred CccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 5678999885554 44455 57777877765 45566566678888888 88877766655 7888988753
Q ss_pred -Ce-eEEEec----CCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942 486 -ST-CVSTFD----KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG 528 (537)
Q Consensus 486 -~~-~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~ 528 (537)
+. ....+. +|...+ ..+ .|+||+++|+..
T Consensus 393 ~g~~~~~~l~~~~~~~~~~~-----------~~~---~~s~dg~~l~~~ 427 (719)
T 1z68_A 393 SYPPSKKCVTCHLRKERCQY-----------YTA---SFSDYAKYYALV 427 (719)
T ss_dssp SSSCCEEESSTTTTTTTBCB-----------EEE---EECGGGSSEEEE
T ss_pred CCCCCceeccCccCCCCCce-----------EEE---EECCCCCEEEEE
Confidence 32 123332 144445 566 999999988753
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=1.9e-20 Score=178.68 Aligned_cols=316 Identities=11% Similarity=-0.039 Sum_probs=190.6
Q ss_pred eeeccceehhhhcCCCc-ceEE-----EEEeccccEEEEEeC-Cc--eEEEEecccccCcccccccccceeEEeecchhh
Q psy10942 81 YYETSAVKELYQHGLSS-PLVR-----IVRSSVKRMYAVVTA-DH--NISLYRLNSETGLEERPNKILKFRKQFVGFSDE 151 (537)
Q Consensus 81 ~wd~~~~~~~~~~~~~~-~v~~-----~~~s~~~~~la~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (537)
.+|..++..+..+..+. .... .+|||||++||+++. ++ .|.+||+.+ ++......++...
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~-----------g~~~~lt~~~~~~ 82 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT-----------QVATQLTEGRGDN 82 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----------CEEEECCCSSCBC
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC-----------CceEEeeeCCCCC
Confidence 34666676666666543 3444 789999999999887 66 478888887 5655555666666
Q ss_pred hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEE
Q psy10942 152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVT 229 (537)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~ 229 (537)
+..++|+ |+++.|+++..+.. + ++||+ .+++.. .. .+ ...+.
T Consensus 83 ~~~~~~s-pdg~~l~~~~~~~~----l-----------------~~~d~-------~~g~~~~~~~-----~~--~~~~~ 126 (388)
T 3pe7_A 83 TFGGFLS-PDDDALFYVKDGRN----L-----------------MRVDL-------ATLEENVVYQ-----VP--AEWVG 126 (388)
T ss_dssp SSSCEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTCCEEEEEE-----CC--TTEEE
T ss_pred ccceEEc-CCCCEEEEEeCCCe----E-----------------EEEEC-------CCCcceeeee-----ch--hhccc
Confidence 6678899 78888888876666 8 88998 776655 33 34 44443
Q ss_pred EEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942 230 LLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL 309 (537)
Q Consensus 230 ~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~ 309 (537)
...+ .++|++++++....++. -|..... .. .+. .......+..|.+||+.+++..
T Consensus 127 ~~~~-~~~~dg~~l~~~~~~~~----~~~~~~~---~~--------~~~--------~~~~~~~~~~l~~~d~~~g~~~- 181 (388)
T 3pe7_A 127 YGTW-VANSDCTKLVGIEIRRE----DWVPLTD---WK--------KFH--------EFYFTKPCCRLMRVDLKTGEST- 181 (388)
T ss_dssp EEEE-EECTTSSEEEEEEEEGG----GCCCCCS---HH--------HHH--------HHGGGCCCEEEEEEETTTCCEE-
T ss_pred ccce-eECCCCCeeccccccCc----ccccccc---cc--------hhh--------hhhccCCcceEEEEECCCCceE-
Confidence 3300 34888888774321111 0100000 00 000 0001122467899999887632
Q ss_pred eeecccccccCCCeEEEEEcC-CCCEEEEEeCCC------cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942 310 NVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDK------TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSI 382 (537)
Q Consensus 310 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 382 (537)
.+..+...+..++|+| ||+.|+....++ .|.++|+.
T Consensus 182 -----~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-------------------------------- 224 (388)
T 3pe7_A 182 -----VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED-------------------------------- 224 (388)
T ss_dssp -----EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT--------------------------------
T ss_pred -----EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC--------------------------------
Confidence 2334566789999999 999988876532 44444443
Q ss_pred CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CC----cEEEEECCCceeee--EeecCCc
Q psy10942 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DA----TIKLWCLTDYVCLK--SLEGHDA 455 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg----~i~i~d~~~~~~~~--~~~~~~~ 455 (537)
.++... +..+... ..+...+|+|||+.|+..+. ++ .|++||+.+++... .+.++..
T Consensus 225 -~~~~~~-l~~~~~~---------------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 287 (388)
T 3pe7_A 225 -GTNMRK-VKTHAEG---------------ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH 287 (388)
T ss_dssp -SCCCEE-SCCCCTT---------------EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred -CCceEE-eeeCCCC---------------cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence 221111 1111100 03556779999987765443 22 39999999876432 3332111
Q ss_pred c---eEEEEEecCCCEEEEE---------eCCCcEEEEECCCCeeEEEecCCcc-----------ceeccCCCCCCcccc
Q psy10942 456 S---VLRCHFINKGTQIVST---------GADGLLKLWSIKTSTCVSTFDKHAL-----------KIRNSDSENDHKGFG 512 (537)
Q Consensus 456 ~---v~~~~~s~~~~~l~s~---------~~dg~v~vwd~~~~~~~~~~~~~~~-----------~i~~~~~~~~~~~~~ 512 (537)
. ...++|+|||+.|+.. ..+..|++||+.+++. ..+..+.. .+ ..
T Consensus 288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~-----------~~ 355 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTH-----------PH 355 (388)
T ss_dssp EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTC-----------CC
T ss_pred eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCC-----------CC
Confidence 0 1224799999988854 4466899999988775 44544544 34 66
Q ss_pred ccceeeecCCCEEEEEe-CCCCEEeC
Q psy10942 513 LPRQLCSRNSDCEYRGG-WSPQVVVY 537 (537)
Q Consensus 513 ~~~~~~s~~~~~l~s~~-~dg~i~vW 537 (537)
+ +|+|||+.|+.++ .+|...||
T Consensus 356 ~---~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 356 P---SFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp C---EECTTSSEEEEEECTTSSCEEE
T ss_pred c---cCCCCCCEEEEEecCCCceeEE
Confidence 7 9999999888665 46766665
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=4.5e-19 Score=166.36 Aligned_cols=286 Identities=10% Similarity=0.073 Sum_probs=178.3
Q ss_pred EEEEEe----CCceEEEEecccccCcccccccccceeE-EeecchhhhhhhhcccCCCccEEEeeec-cccCCcccceee
Q psy10942 110 MYAVVT----ADHNISLYRLNSETGLEERPNKILKFRK-QFVGFSDEILDIALLGEEDSHIVVASNE-YLNGGDLSGLVK 183 (537)
Q Consensus 110 ~la~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~ 183 (537)
.+++++ .++.|.+|+++..+ ++... ....+...+..++|+ ++++ |++++.. .+ +.|
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~t---------g~~~~~~~~~~~~~p~~~a~s-pdg~-l~~~~~~~~~--~~v----- 65 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTA---------KTLTNDGLLAATQNPTYLALS-AKDC-LYSVDKEDDE--GGI----- 65 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTT---------TEEEEEEEEEECSCCCCEEEC-TTCE-EEEEEEETTE--EEE-----
T ss_pred EEEEEeccCCCCCCEEEEEEcCCC---------CeEEEeeeeeccCCcceEEEc-cCCe-EEEEEecCCC--ceE-----
Confidence 455553 24568888776521 22221 233455668889999 6777 6655542 12 338
Q ss_pred cccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccC
Q psy10942 184 LGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKT 261 (537)
Q Consensus 184 ~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~ 261 (537)
.+|++ ..+... +. ....+ ...+..+ +|+|+|++|++++ .++.+. +|++..
T Consensus 66 ------------~~~~~-------~~g~~~~~~--~~~~~--~~~p~~~---a~spdg~~l~~~~~~~~~v~--v~~~~~ 117 (347)
T 3hfq_A 66 ------------AAWQI-------DGQTAHKLN--TVVAP--GTPPAYV---AVDEARQLVYSANYHKGTAE--VMKIAA 117 (347)
T ss_dssp ------------EEEEE-------ETTEEEEEE--EEEEE--SCCCSEE---EEETTTTEEEEEETTTTEEE--EEEECT
T ss_pred ------------EEEEe-------cCCcEEEee--eeecC--CCCCEEE---EECCCCCEEEEEeCCCCEEE--EEEeCC
Confidence 88988 655433 21 01146 6678889 9999999888776 678899 999864
Q ss_pred CCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC
Q psy10942 262 YHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD 341 (537)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 341 (537)
... .. .+.......... . ...+...+.+++|+|+|+++++...+
T Consensus 118 ~g~-~~----------------------------~~~~~~~~~~~p-----~--~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 118 DGA-LT----------------------------LTDTVQHSGHGP-----R--PEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp TSC-EE----------------------------EEEEEECCCCCS-----S--TTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred CCC-ee----------------------------ecceeecCCCCC-----C--ccccCCCceEEEECCCCcEEEEeCCC
Confidence 210 00 000011110000 0 11234568899999999966666678
Q ss_pred CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942 342 KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421 (537)
Q Consensus 342 ~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s 421 (537)
+.|++|++...++........ ...+ . .+..++|+
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~-------------------~~~g----------~-----------------~p~~~~~s 195 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLT-------------------MEAG----------F-----------------GPRHLVFS 195 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEE-------------------CCTT----------C-----------------CEEEEEEC
T ss_pred CEEEEEEECCCCcEEEeeeEE-------------------cCCC----------C-----------------CCceEEEC
Confidence 889999987322221111000 0000 0 45678999
Q ss_pred CCCCEEEEE-eCCCcEEEEECCC--cee--eeEeecCC------cceEEEEEecCCCEEE-EEeCCCcEEEEECCC---C
Q psy10942 422 PLDRILISS-SGDATIKLWCLTD--YVC--LKSLEGHD------ASVLRCHFINKGTQIV-STGADGLLKLWSIKT---S 486 (537)
Q Consensus 422 ~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~---~ 486 (537)
|||++++++ ..++.|.+|++.. ++. +..+.... ..+..++|+|||++|+ +...++.|.+|++.. .
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence 999966664 5678999999874 443 23333322 3488999999999875 555689999999872 2
Q ss_pred eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC-CCEEeC
Q psy10942 487 TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS-PQVVVY 537 (537)
Q Consensus 487 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d-g~i~vW 537 (537)
+.+..+..+...+ ..+ +|+|||++|++++.+ +.|.+|
T Consensus 276 ~~~~~~~~~~~~~-----------~~~---~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 276 TLIQQISTEGDFP-----------RDF---DLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEEEECSSSCC-----------CEE---EECTTSSEEEEEETTTTEEEEE
T ss_pred EEeEEEecCCCCc-----------CeE---EECCCCCEEEEEEcCCCcEEEE
Confidence 4555555555556 778 999999999888764 788876
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=2.8e-19 Score=167.92 Aligned_cols=305 Identities=10% Similarity=0.015 Sum_probs=187.6
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCCc--ceEEEEEeccccEEEEE-eCCceEEEEecccccCccccccccccee
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSS--PLVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFR 142 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~--~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 142 (537)
++.++++++.++.|.+||+.+++.+..+..+. .+..++|+|||++++++ ..++.|.+||+.+ .+..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-----------~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-----------CKNT 78 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-----------TEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-----------CcEE
Confidence 66888898899999999999999888777665 78899999999876544 4688999999988 5555
Q ss_pred EEeecc------hhhhhhhhcccCCCccEEEeeeccc--------cCCcccceeecccCCCcchhhHHHHHHHHHhhhcc
Q psy10942 143 KQFVGF------SDEILDIALLGEEDSHIVVASNEYL--------NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQ 208 (537)
Q Consensus 143 ~~~~~~------~~~v~~~~~~~~~~~~l~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~ 208 (537)
..+..+ ...+..++|+ +++++++++..+.. ..+.| .+||+ .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i-----------------~~~d~-------~ 133 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRL-----------------EVFST-------A 133 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEE-----------------EEEEG-------G
T ss_pred EEEEcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeE-----------------EEEEC-------C
Confidence 555532 2337889999 78888887775400 01237 88998 6
Q ss_pred ccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcce
Q psy10942 209 SSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVE 286 (537)
Q Consensus 209 ~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 286 (537)
+++.. +. ...+ ...+.++ +|+|+|+ ++.++. .+. +|+..++.... .+.........
T Consensus 134 ~~~~~~~~~---~~~~--~~~~~~~---~~s~dg~-l~~~~~--~i~--~~d~~~~~~~~---------~~~~~~~~~~~ 191 (349)
T 1jmx_B 134 DGLEAKPVR---TFPM--PRQVYLM---RAADDGS-LYVAGP--DIY--KMDVKTGKYTV---------ALPLRNWNRKG 191 (349)
T ss_dssp GGGGBCCSE---EEEC--CSSCCCE---EECTTSC-EEEESS--SEE--EECTTTCCEEE---------EECSTTCCCTT
T ss_pred Cccccceee---eccC--CCcccce---eECCCCc-EEEccC--cEE--EEeCCCCceec---------cccccccCCcc
Confidence 54332 11 0023 4467888 8999999 555443 388 99987742110 00000000000
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEEccCCceeeEEEEecCCC
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-TVKVWSTTGGLKLLNVLRGHKKG 365 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~ 365 (537)
. . ....+.+|........ ......+++++++.......... .+..++.
T Consensus 192 ~---~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---------------- 240 (349)
T 1jmx_B 192 Y---S-APDVLYFWPHQSPRHE-----------FSMLYTIARFKDDKQDPATADLLYGYLSVDL---------------- 240 (349)
T ss_dssp B---C-CCBCCCCCCCCCTTCE-----------EEEEEEEEEC-------CCCEEEEEEEEEET----------------
T ss_pred c---c-CccceeeecCCCccee-----------EEeeeeeeecCCCcCCccccccceeEEEEec----------------
Confidence 0 0 0001112221111100 00123455555442111000000 0111222
Q ss_pred CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCc
Q psy10942 366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDY 444 (537)
Q Consensus 366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~ 444 (537)
.++.++++++.. ... .+..++|+| ++++++++ ++.|.+||+.++
T Consensus 241 -------~~~~~~~~~~~~---------~~~-----------------~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~ 285 (349)
T 1jmx_B 241 -------KTGKTHTQEFAD---------LTE-----------------LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR 285 (349)
T ss_dssp -------TTCCEEEEEEEE---------CSS-----------------CEEEEEECSSCTTEEEEE--ESEEEEEETTTT
T ss_pred -------cCCcEEeccccc---------CCC-----------------cceeeEecCCCCCEEEEE--cCeEEEEECccC
Confidence 223344443311 000 567889999 99999988 789999999999
Q ss_pred eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942 445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495 (537)
Q Consensus 445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 495 (537)
+.+..+... ..+.+++|+|++++|++++.++.|++||+.+++.+..+..+
T Consensus 286 ~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 286 KLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred eEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 988887743 45789999999999998888999999999999998888655
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.8e-18 Score=178.76 Aligned_cols=373 Identities=9% Similarity=0.005 Sum_probs=206.6
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecccc--cccee--eeEeecCccccccCCcEEEEEeCcc----
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYE--SLETC--AVFHLSDETESKSGGKTFVLAGGEK---- 76 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---- 76 (537)
..++.|+ +|+++++++ ||.|++||+++++....+.... ..... .+.++| ++++++.++.+
T Consensus 19 ~~~~~w~--~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--------dg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 19 LYSLRWI--SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--------DGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCEEEC--SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT--------TSSEEEEEEEEEECS
T ss_pred ccccEEC--CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC--------CCCEEEEEECCeeeE
Confidence 4578899 899999987 8999999999998776655322 11111 135677 66777777755
Q ss_pred -----ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhh
Q psy10942 77 -----SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDE 151 (537)
Q Consensus 77 -----~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (537)
+.+.+||+.+++......+.+.+...+|||||+.||.+. ++.|++|++.++ +.. .+.
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~-----------~~~-~lt----- 148 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL-----------PSY-RIT----- 148 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS-----------CCE-ECC-----
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC-----------ceE-EEc-----
Confidence 667799999998765444567899999999999999885 588999999883 322 221
Q ss_pred hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeEEEE
Q psy10942 152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTVTLL 231 (537)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v~~~ 231 (537)
+. .....+.- +..+ .+|.. +. ......+
T Consensus 149 -----~~-g~~~~~~~--g~~~----------------------~v~~e-------e~---------------~~~~~~~ 176 (740)
T 4a5s_A 149 -----WT-GKEDIIYN--GITD----------------------WVYEE-------EV---------------FSAYSAL 176 (740)
T ss_dssp -----SC-CBTTTEEE--SBCC----------------------HHHHH-------HT---------------SSSSBCE
T ss_pred -----CC-CCccceec--Cccc----------------------ccccc-------hh---------------cCCCcce
Confidence 11 01111111 1111 44443 11 1112355
Q ss_pred eccCcccCCCeeeeccCCCc-ceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC--CCeEEEEECCC---C
Q psy10942 232 ERGKTVKEEDLFPRQSMEPS-TLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL--DKTVKVWSTTG---G 305 (537)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~-i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--d~~i~i~~~~~---~ 305 (537)
.|||||++||..+.|.. +. +|++....... ...+....+.... .|.. ...|++||+.+ +
T Consensus 177 ---~wSpDg~~la~~~~d~~~v~--~~~~~~~~~~~--~~~~~~~~~~yp~--------~G~~~~~~~l~v~d~~~~~~~ 241 (740)
T 4a5s_A 177 ---WWSPNGTFLAYAQFNDTEVP--LIEYSFYSDES--LQYPKTVRVPYPK--------AGAVNPTVKFFVVNTDSLSSV 241 (740)
T ss_dssp ---EECTTSSEEEEEEEECTTCC--EEEEEECCSTT--CSSCEEEEEECCB--------TTSCCCEEEEEEEETTSCCSS
T ss_pred ---EECCCCCEEEEEEEcccCCc--eEEEEeecCCC--CCCCcceeecCCC--------CcCcCCeeEEEEEECCCCCCC
Confidence 78888888887765544 77 77664321110 0000011111111 1111 12688899988 6
Q ss_pred c--eeeeee-cccccccCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEE
Q psy10942 306 L--KLLNVL-RGHKKGHEKDINCVTVSPNDKLLASGSL----DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLK 378 (537)
Q Consensus 306 ~--~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 378 (537)
. ....+. ...+.+|...+..++|+|||+.++.... +..|++||+.++.......
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~------------------- 302 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL------------------- 302 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC-------------------
T ss_pred CcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee-------------------
Confidence 2 111110 0111247778999999999996665432 2357777776322000000
Q ss_pred EEECCCCeeeeee--ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE-EEeC-C--CcEEEEECCCceeeeEeec
Q psy10942 379 LWSIKTSTCVSTF--DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI-SSSG-D--ATIKLWCLTDYVCLKSLEG 452 (537)
Q Consensus 379 i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~-d--g~i~i~d~~~~~~~~~~~~ 452 (537)
....+ ..+...+.. ......+|+|||+.|+ ..+. + ..|++||+.+++... +..
T Consensus 303 --------~~~~l~~~~~~~~v~~------------~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~ 361 (740)
T 4a5s_A 303 --------VARQHIEMSTTGWVGR------------FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITK 361 (740)
T ss_dssp --------GGGCEEEECSSSCSSS------------SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCC
T ss_pred --------EEEEeeeccCCceEcc------------CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-ccc
Confidence 00000 111111000 0123567899998777 5553 3 368888988765544 333
Q ss_pred CCcceEEEEEecCCCEEEEEeCC-----C--cEEEEECCCCeeEEEecC----CccceeccCCCCCCccccccceeeecC
Q psy10942 453 HDASVLRCHFINKGTQIVSTGAD-----G--LLKLWSIKTSTCVSTFDK----HALKIRNSDSENDHKGFGLPRQLCSRN 521 (537)
Q Consensus 453 ~~~~v~~~~~s~~~~~l~s~~~d-----g--~v~vwd~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~s~~ 521 (537)
....+..+.. +|++.|+..+.. + .|+..++..++....+.. ..... ... .|||+
T Consensus 362 g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~-----------~~~---~~S~d 426 (740)
T 4a5s_A 362 GTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQY-----------YSV---SFSKE 426 (740)
T ss_dssp SSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCB-----------EEE---EECTT
T ss_pred CCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCce-----------EEE---EECCC
Confidence 4455665543 446666544432 3 344455544333223331 11233 566 99999
Q ss_pred CCEEEEEe
Q psy10942 522 SDCEYRGG 529 (537)
Q Consensus 522 ~~~l~s~~ 529 (537)
+++++...
T Consensus 427 g~~~~~~~ 434 (740)
T 4a5s_A 427 AKYYQLRC 434 (740)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEe
Confidence 99876543
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=5.1e-20 Score=185.45 Aligned_cols=232 Identities=9% Similarity=0.007 Sum_probs=156.8
Q ss_pred eeeeeeeeeccCCcceEEEecC-cceEEEEEcCccceeeeeccc-cccceeeeEeecCccccccCCcEEEEEeCc---cc
Q psy10942 3 FCVTCFDVIPQITSEFSVHCGR-DKVLFTWDLSSRKQLRSYPAY-ESLETCAVFHLSDETESKSGGKTFVLAGGE---KS 77 (537)
Q Consensus 3 ~~V~~~~~~~~~~~~~l~s~~~-~g~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 77 (537)
..|.+++|+ +||+.|++++. +|+++||++++++..+..... ..+... .++| + ++++++.. +.
T Consensus 22 ~~~~~~~~~--~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~--~~sp--------d-~~l~~~~~~~g~~ 88 (582)
T 3o4h_A 22 VEKYSLQGV--VDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDP--HYGV--------G-RVILVRDVSKGAE 88 (582)
T ss_dssp SCEEEEEEE--ETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEE--CTTC--------S-EEEEEEECSTTSC
T ss_pred cchheeecC--CCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccc--cCCC--------C-eEEEEeccCCCCc
Confidence 468899999 89999999876 999999999777655544333 244555 5566 6 67776653 44
Q ss_pred eEEeeeccc---eehhhhcCCCcceEEEEEeccccE--EEEEeCCceEEEEecccccCcccccccccceeEEeecchhhh
Q psy10942 78 LLHYYETSA---VKELYQHGLSSPLVRIVRSSVKRM--YAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI 152 (537)
Q Consensus 78 ~i~~wd~~~---~~~~~~~~~~~~v~~~~~s~~~~~--la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v 152 (537)
...+|.+.. +... .+.....+...+|+|||+. ++++. ++.+.+||+.+ ++..... .+..
T Consensus 89 ~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~-~~~~~l~d~~~-----------g~~~~l~-~~~~-- 152 (582)
T 3o4h_A 89 QHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGAT-EDRVALYALDG-----------GGLRELA-RLPG-- 152 (582)
T ss_dssp CEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEEC-SSCEEEEEEET-----------TEEEEEE-EESS--
T ss_pred ceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecC-CCCceEEEccC-----------CcEEEee-cCCC--
Confidence 455655433 2222 3443444557788998864 44434 44566999988 4443333 3333
Q ss_pred hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942 153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL 231 (537)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~ 231 (537)
.+++|+ |+++.|++++.+..+...| ++||+ .+++.. +. .| ...+..+
T Consensus 153 ~~~~~s-pDG~~la~~~~~~~~~~~i-----------------~~~d~-------~~g~~~~l~-----~~--~~~~~~~ 200 (582)
T 3o4h_A 153 FGFVSD-IRGDLIAGLGFFGGGRVSL-----------------FTSNL-------SSGGLRVFD-----SG--EGSFSSA 200 (582)
T ss_dssp CEEEEE-EETTEEEEEEEEETTEEEE-----------------EEEET-------TTCCCEEEC-----CS--SCEEEEE
T ss_pred ceEEEC-CCCCEEEEEEEcCCCCeEE-----------------EEEcC-------CCCCceEee-----cC--CCccccc
Confidence 788999 7889988777763322338 88998 777766 77 88 8899999
Q ss_pred eccCcccCCCeeeeccCCC--cceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceee
Q psy10942 232 ERGKTVKEEDLFPRQSMEP--STLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLL 309 (537)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~--~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~ 309 (537)
+|+|||++|+++..++ .|. +|++.++ +..
T Consensus 201 ---~~SpDG~~l~~~~~~~~~~i~--~~d~~~~-------------------------------------------~~~- 231 (582)
T 3o4h_A 201 ---SISPGMKVTAGLETAREARLV--TVDPRDG-------------------------------------------SVE- 231 (582)
T ss_dssp ---EECTTSCEEEEEECSSCEEEE--EECTTTC-------------------------------------------CEE-
T ss_pred ---eECCCCCEEEEccCCCeeEEE--EEcCCCC-------------------------------------------cEE-
Confidence 9999999999777776 566 6666542 210
Q ss_pred eeecccccccCCCe--------EEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942 310 NVLRGHKKGHEKDI--------NCVTVSPNDKLLASGSLDKTVKVWST 349 (537)
Q Consensus 310 ~~~~~~~~~~~~~v--------~~~~~s~~~~~l~~~~~d~~i~i~d~ 349 (537)
.+..|...+ ....|+|||.++++++.|+.+++|++
T Consensus 232 -----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 232 -----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp -----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred -----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 111222223 34449999988999999999999998
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=3.2e-19 Score=171.47 Aligned_cols=180 Identities=11% Similarity=0.085 Sum_probs=143.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC------------------------ceeeEEEEecCCCCEEE----EEc
Q psy10942 321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGG------------------------LKLLNVLRGHKKGTQIV----STG 372 (537)
Q Consensus 321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~------------------------~~~~~~~~~~~~~~~l~----~~~ 372 (537)
..++.+++++++.++++++.|+ +++|+.... ...+..+..++++.+++ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 4578899999999999999888 888875310 01267788889999999 788
Q ss_pred CCCcEEEEECCCC--------ee---eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEE
Q psy10942 373 ADGLLKLWSIKTS--------TC---VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWC 440 (537)
Q Consensus 373 ~d~~i~i~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d 440 (537)
.|+.|++||+.++ +. +..+.+|.. .|.+++|+|+ +++|++++.||+|++||
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-----------------~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-----------------MVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-----------------SEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCC-----------------ceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 9999999998754 11 233344444 7888899997 78999999999999999
Q ss_pred CCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc-------cceeccCCCCCCccccc
Q psy10942 441 LTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA-------LKIRNSDSENDHKGFGL 513 (537)
Q Consensus 441 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~~~ 513 (537)
++++..+....+|...|.+++|+|+|++|++++.||.|++||++ ++....+..|. ..+ .++
T Consensus 179 ~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v-----------~~v 246 (434)
T 2oit_A 179 VTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV-----------LDV 246 (434)
T ss_dssp ESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE-----------EEE
T ss_pred cCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE-----------EEE
Confidence 99988777777899999999999999999999999999999997 66666665443 255 777
Q ss_pred cceeeecCCCEEEEE-eCCCC
Q psy10942 514 PRQLCSRNSDCEYRG-GWSPQ 533 (537)
Q Consensus 514 ~~~~~s~~~~~l~s~-~~dg~ 533 (537)
+|++++.++++. +.||.
T Consensus 247 ---~w~~~~~~l~~~~~~dg~ 264 (434)
T 2oit_A 247 ---LWIGTYVFAIVYAAADGT 264 (434)
T ss_dssp ---EEEETTEEEEEEEETTCC
T ss_pred ---EEecCceEEEEEccCCCc
Confidence 999999888653 34543
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=2.9e-18 Score=164.74 Aligned_cols=171 Identities=13% Similarity=0.028 Sum_probs=125.3
Q ss_pred cCCCcCeEEEEeccCcccCCCeee----eccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFP----RQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT 296 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~----~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~ 296 (537)
.+ ...|.++ +|+|++++|+ +++.|+.|+ +|++........
T Consensus 90 ~~--~~~v~~l---~~spdg~~lav~~~sgs~d~~v~--iwd~~~~~~~~~----------------------------- 133 (434)
T 2oit_A 90 PM--KFPIHHL---ALSCDNLTLSACMMSSEYGSIIA--FFDVRTFSNEAK----------------------------- 133 (434)
T ss_dssp CC--SSCEEEE---EECTTSCEEEEEEEETTTEEEEE--EEEHHHHHCTTC-----------------------------
T ss_pred cC--CCcccEE---EEcCCCCEEEEEEeccCCCceEE--EEEccccccCCc-----------------------------
Confidence 45 7789999 9999999999 899999999 999876210000
Q ss_pred EEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCC
Q psy10942 297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG 375 (537)
Q Consensus 297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~ 375 (537)
...+... . ...+.+|...|.+++|+|+ +++|++++.||.|++||++ ..........|..
T Consensus 134 ------~~~~~~~-~-~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~-~~~~~~~~~~~~~----------- 193 (434)
T 2oit_A 134 ------QQKRPFA-Y-HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT-ETVKVCATLPSTV----------- 193 (434)
T ss_dssp ------SSCCCSE-E-EECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES-SSEEEEEEECGGG-----------
T ss_pred ------CCcceee-e-eeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC-CCcceeeccCCCC-----------
Confidence 0000000 0 2234578899999999998 8899999999999999998 3333222222222
Q ss_pred cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--
Q psy10942 376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-- 453 (537)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-- 453 (537)
.+.+++|+|+|++|++|+.||.|++||.+ ++....+..|
T Consensus 194 --------------------------------------~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~ 234 (434)
T 2oit_A 194 --------------------------------------AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF 234 (434)
T ss_dssp --------------------------------------CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT
T ss_pred --------------------------------------ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc
Confidence 78999999999999999999999999998 5555555443
Q ss_pred -----CcceEEEEEecCCCEEEEE-eCCCc------EEEEECCCC
Q psy10942 454 -----DASVLRCHFINKGTQIVST-GADGL------LKLWSIKTS 486 (537)
Q Consensus 454 -----~~~v~~~~~s~~~~~l~s~-~~dg~------v~vwd~~~~ 486 (537)
...|.+++|++++.++++. ..||. +++|++.+.
T Consensus 235 ~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 235 YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 2379999999998877653 34433 899999764
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.9e-19 Score=186.05 Aligned_cols=299 Identities=9% Similarity=0.025 Sum_probs=186.4
Q ss_pred ceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh-----hhcccCCCccEEEeeecc
Q psy10942 98 PLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD-----IALLGEEDSHIVVASNEY 172 (537)
Q Consensus 98 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~l~~~~~~~ 172 (537)
...+++|+|||++|+++ |++|++||+.+ ++....+.+|...... ++|| ||+++|++++.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~S-pdg~~l~~~~~~~ 83 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEY-----------GNSSVFLENSTFDEFGHSINDYSIS-PDGQFILLEYNYV 83 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTT-----------CCEEEEECTTTTTTCCSCCCEEEEC-TTSSEEEEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCC-----------CceEEEEechhhhhhcccccceEEC-CCCCEEEEEECCe
Confidence 46689999999999886 89999999999 5666677777654433 4669 7889998888764
Q ss_pred cc-----CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec
Q psy10942 173 LN-----GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ 246 (537)
Q Consensus 173 ~~-----~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~ 246 (537)
.. .+.+ .+||+ .+++.. +. .| ...+... +|||||+.||.+
T Consensus 84 ~~~r~~~~~~~-----------------~~~d~-------~~~~~~~l~-----~~--~~~~~~~---~~SPdG~~la~~ 129 (740)
T 4a5s_A 84 KQWRHSYTASY-----------------DIYDL-------NKRQLITEE-----RI--PNNTQWV---TWSPVGHKLAYV 129 (740)
T ss_dssp ECSSSCEEEEE-----------------EEEET-------TTTEECCSS-----CC--CTTEEEE---EECSSTTCEEEE
T ss_pred eeEEEccceEE-----------------EEEEC-------CCCcEEEcc-----cC--CCcceee---EECCCCCEEEEE
Confidence 30 0224 68999 888776 77 77 7889999 999999999988
Q ss_pred cCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEE
Q psy10942 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCV 326 (537)
Q Consensus 247 ~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (537)
. ++.|. +|+...+..... +..++. + .+++-...- ... ...-+....+
T Consensus 130 ~-~~~i~--~~~~~~~~~~~l--------t~~g~~-------------~--~~~~g~~~~------v~~-ee~~~~~~~~ 176 (740)
T 4a5s_A 130 W-NNDIY--VKIEPNLPSYRI--------TWTGKE-------------D--IIYNGITDW------VYE-EEVFSAYSAL 176 (740)
T ss_dssp E-TTEEE--EESSTTSCCEEC--------CSCCBT-------------T--TEEESBCCH------HHH-HHTSSSSBCE
T ss_pred E-CCeEE--EEECCCCceEEE--------cCCCCc-------------c--ceecCcccc------ccc-chhcCCCcce
Confidence 4 67899 999876421100 000000 0 000000000 000 0001223568
Q ss_pred EEcCCCCEEEEEeCCCc-EEEEEccCC------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCC---Ce--eeeeecc-
Q psy10942 327 TVSPNDKLLASGSLDKT-VKVWSTTGG------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT---ST--CVSTFDK- 393 (537)
Q Consensus 327 ~~s~~~~~l~~~~~d~~-i~i~d~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~--~~~~~~~- 393 (537)
.|||||+.|+.++.|.. +.+|++... ......+.....|.. ....++++||+.+ ++ ....+..
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 99999999998875544 888877411 122233333333221 1123688999998 73 1222221
Q ss_pred -----CCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC----CCcEEEEECCCce----ee--eEe--ecCCcc
Q psy10942 394 -----HALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG----DATIKLWCLTDYV----CL--KSL--EGHDAS 456 (537)
Q Consensus 394 -----~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~----~~--~~~--~~~~~~ 456 (537)
+.. .+..++|+|||+.++.... +..|.+||+.+++ +. ..+ ..|...
T Consensus 253 ~~~~~~~~-----------------~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 253 ASMLIGDH-----------------YLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp HHHHTSCE-----------------EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred ccCCCCCe-----------------EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence 322 5677888888886665433 3379999998876 22 222 456655
Q ss_pred eE-----EEEEecCCCEEE-EEeC-C--CcEEEEECCCCeeEEEecCCccce
Q psy10942 457 VL-----RCHFINKGTQIV-STGA-D--GLLKLWSIKTSTCVSTFDKHALKI 499 (537)
Q Consensus 457 v~-----~~~~s~~~~~l~-s~~~-d--g~v~vwd~~~~~~~~~~~~~~~~i 499 (537)
|. .+.|+|||+.|+ ..+. + ..|++||+.+++... +......+
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v 366 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEV 366 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCE
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEE
Confidence 54 789999999887 6654 3 358889987766543 33333334
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=2.1e-18 Score=162.72 Aligned_cols=248 Identities=8% Similarity=0.065 Sum_probs=154.5
Q ss_pred cCeEEEEeccCcccCCCeeeeccCC----CcceeccccccCCCcccccccc-----cccceeeeeeCCcceEEEEEeCCC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSME----PSTLEELEKRKTYHFPLFGIFV-----PEAEHGAFYTGGTVELLASGSLDK 295 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d----~~i~~~iw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~l~~~~~d~ 295 (537)
...+..+ +|+|+|++|++++.+ +.+. +|++............ .....+.. ... .++++...++
T Consensus 49 ~~~p~~l---~~spdg~~l~~~~~~~~~~~~v~--~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~ 120 (361)
T 3scy_A 49 VANPSYL---IPSADGKFVYSVNEFSKDQAAVS--AFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK-NIVTANYSGG 120 (361)
T ss_dssp CSCCCSE---EECTTSSEEEEEECCSSTTCEEE--EEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS-EEEEEETTTT
T ss_pred CCCCceE---EECCCCCEEEEEEccCCCCCcEE--EEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC-EEEEEECCCC
Confidence 5667778 999999999988875 7898 9998764221111000 00011111 111 2444445789
Q ss_pred eEEEEECCCCceeeeeecc-c--------ccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCce----e-eEEEE
Q psy10942 296 TVKVWSTTGGLKLLNVLRG-H--------KKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLK----L-LNVLR 360 (537)
Q Consensus 296 ~i~i~~~~~~~~~~~~~~~-~--------~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~----~-~~~~~ 360 (537)
.|.+|++.....+...... . ...+...+.+++|+|+|+++++++ .++.|.+|++..... . +....
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 9999999754432211000 0 111233468899999999776655 478899998873221 0 11000
Q ss_pred ecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEE
Q psy10942 361 GHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLW 439 (537)
Q Consensus 361 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~ 439 (537)
. .... ...... ....++|+|||+++++++ .++.|.+|
T Consensus 201 ~---------------~~~~---------~~~~~~------------------~~~~~~~spdg~~l~v~~~~~~~v~v~ 238 (361)
T 3scy_A 201 T---------------PEAF---------KVAPGS------------------GPRHLIFNSDGKFAYLINEIGGTVIAF 238 (361)
T ss_dssp E---------------EEEE---------ECCTTC------------------CEEEEEECTTSSEEEEEETTTCEEEEE
T ss_pred c---------------ccce---------ecCCCC------------------CCeEEEEcCCCCEEEEEcCCCCeEEEE
Confidence 0 0000 000000 567799999999888777 58999999
Q ss_pred ECCCcee--eeEee---cCCcceEEEEEecCCCEEEEEeCC--CcEEEEECC--CCe--eEEEecCCccceeccCCCCCC
Q psy10942 440 CLTDYVC--LKSLE---GHDASVLRCHFINKGTQIVSTGAD--GLLKLWSIK--TST--CVSTFDKHALKIRNSDSENDH 508 (537)
Q Consensus 440 d~~~~~~--~~~~~---~~~~~v~~~~~s~~~~~l~s~~~d--g~v~vwd~~--~~~--~~~~~~~~~~~i~~~~~~~~~ 508 (537)
++.+++. +..+. .+......++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~--------- 308 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP--------- 308 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC---------
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC---------
Confidence 9987654 33332 233456899999999999776654 889999985 454 3334433 3344
Q ss_pred ccccccceeeecCCCEEEEEe-CCCCEEeC
Q psy10942 509 KGFGLPRQLCSRNSDCEYRGG-WSPQVVVY 537 (537)
Q Consensus 509 ~~~~~~~~~~s~~~~~l~s~~-~dg~i~vW 537 (537)
..+ +|+|||++|++++ .++.|.+|
T Consensus 309 --~~~---~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 309 --RNF---IITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp --CEE---EECTTSCEEEEEETTTTEEEEE
T ss_pred --ceE---EECCCCCEEEEEECCCCCEEEE
Confidence 677 9999999998887 57888875
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=2.6e-18 Score=162.07 Aligned_cols=297 Identities=10% Similarity=0.054 Sum_probs=177.2
Q ss_pred cEEEEEe----CccceEEeeecc--ceeh--hhhcCCCcceEEEEEeccccEEEEEeCC----ceEEEEecccccCcccc
Q psy10942 67 KTFVLAG----GEKSLLHYYETS--AVKE--LYQHGLSSPLVRIVRSSVKRMYAVVTAD----HNISLYRLNSETGLEER 134 (537)
Q Consensus 67 ~~~~~~~----~~~~~i~~wd~~--~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~ 134 (537)
..+++++ +.++.|.+|++. +++. +... ....+..++|+|||++|++++.+ +.|.+|+++.....
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~--- 88 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT--- 88 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE---
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc---
Confidence 3455555 346679999764 4433 3333 34578889999999999998885 79999998762110
Q ss_pred cccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-
Q psy10942 135 PNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ- 213 (537)
Q Consensus 135 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~- 213 (537)
.+.+.....+......+++ ++++|+++... + +.+ .+|++ ......
T Consensus 89 ----~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~-~--~~v-----------------~~~~~-------~~~g~~~ 134 (361)
T 3scy_A 89 ----LHLLNTQKTMGADPCYLTT---NGKNIVTANYS-G--GSI-----------------TVFPI-------GQDGALL 134 (361)
T ss_dssp ----EEEEEEEECSSSCEEEEEE---CSSEEEEEETT-T--TEE-----------------EEEEB-------CTTSCBC
T ss_pred ----EEEeeEeccCCCCcEEEEE---CCCEEEEEECC-C--CEE-----------------EEEEe-------CCCCcCc
Confidence 2333334434444555555 46666665432 2 337 77776 322211
Q ss_pred -cc-ccc--------cccCCCcCeEEEEeccCcccCCCeeeec-cCCCcceeccccccCCCcccccccccccceeeeeeC
Q psy10942 214 -KH-NTE--------RLGRDELKTVTLLERGKTVKEEDLFPRQ-SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTG 282 (537)
Q Consensus 214 -l~-~~~--------~~~h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (537)
+. ... ...+ ...+.++ +|+|+|++++++ ..++.+. +|++......... ..+...
T Consensus 135 ~~~~~~~~~g~~~~~~~~~--~~~~~~~---~~spdg~~l~~~~~~~~~v~--v~~~~~~~~~~~~------~~l~~~-- 199 (361)
T 3scy_A 135 PASDVIEFKGSGPDKERQT--MPHLHCV---RITPDGKYLLADDLGTDQIH--KFNINPNANADNK------EKFLTK-- 199 (361)
T ss_dssp SCSEEEECCCCCSCTTTCS--SCCEEEE---EECTTSSEEEEEETTTTEEE--EEEECTTCCTTTC------CCCEEE--
T ss_pred ccceeEEccCCCCCccccC--CCcceEE---EECCCCCEEEEEeCCCCEEE--EEEEcCCCCcccc------cceeec--
Confidence 10 000 0012 3346788 999999866554 4467788 8877653210000 000000
Q ss_pred CcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeE--EE
Q psy10942 283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLN--VL 359 (537)
Q Consensus 283 ~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~--~~ 359 (537)
+...... ..+...+..++|+|||+++++++ .++.|.+|++. ...... .+
T Consensus 200 ------------~~~~~~~---------------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~-~g~~~~~~~~ 251 (361)
T 3scy_A 200 ------------GTPEAFK---------------VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA-DGMLDEIQTV 251 (361)
T ss_dssp ------------EEEEEEE---------------CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE-TTEEEEEEEE
T ss_pred ------------cccccee---------------cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec-CCceEEeEEE
Confidence 0000001 11234467899999999888777 68999999987 433211 11
Q ss_pred EecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEE
Q psy10942 360 RGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIK 437 (537)
Q Consensus 360 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~ 437 (537)
...+. +.. ....++|+|||++|+++..+ +.|.
T Consensus 252 ~~~~~-----------------------------~~~-----------------~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 252 AADTV-----------------------------NAQ-----------------GSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ESCSS-----------------------------CCC-----------------CEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCC-----------------------------CCC-----------------CcccEEECCCCCEEEEECCCCCCEEE
Confidence 11110 000 45688999999998776654 8999
Q ss_pred EEECC--Cce--eeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEE--ECCCCeeEEE
Q psy10942 438 LWCLT--DYV--CLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLW--SIKTSTCVST 491 (537)
Q Consensus 438 i~d~~--~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vw--d~~~~~~~~~ 491 (537)
+|++. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+| |..++++...
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 99985 344 4445554 45688999999999998887 57889996 5556765543
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=2.9e-18 Score=160.83 Aligned_cols=299 Identities=11% Similarity=0.025 Sum_probs=193.7
Q ss_pred ccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeC----------CceEEEEecccccCcccccccccceeEE
Q psy10942 75 EKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTA----------DHNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 75 ~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
.++.|.+||..+++.+.++.....- .++|+|||++|+++.. ++.|.+||..+ .+.+.+
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t-----------~~~~~~ 96 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK-----------LTFEKE 96 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT-----------CCEEEE
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC-----------CcEEEE
Confidence 3679999999999888777665444 9999999999998863 67899999988 666766
Q ss_pred eecc------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-c-cc
Q psy10942 145 FVGF------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-K-HN 216 (537)
Q Consensus 145 ~~~~------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l-~~ 216 (537)
+... ......++|+ +++++|+++..... +.| .+||+ .+.+.. . -
T Consensus 97 i~~~~~~~~~g~~p~~i~~s-pdg~~l~v~n~~~~--~~v-----------------~v~d~-------~~~~~~~~~i- 148 (361)
T 2oiz_A 97 ISLPPKRVQGLNYDGLFRQT-TDGKFIVLQNASPA--TSI-----------------GIVDV-------AKGDYVEDVT- 148 (361)
T ss_dssp EEECTTBCCBCCCGGGEEEC-TTSSEEEEEEESSS--EEE-----------------EEEET-------TTTEEEEEEG-
T ss_pred EEcCccccccCCCcceEEEC-CCCCEEEEECCCCC--CeE-----------------EEEEC-------CCCcEEEEEe-
Confidence 6542 2457889999 78888887764322 238 88888 655443 1 1
Q ss_pred cccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCC
Q psy10942 217 TERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDK 295 (537)
Q Consensus 217 ~~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~ 295 (537)
.. ... ..+ .+.|++ ..+++.+.||.+. +|+....... .....
T Consensus 149 ----~~--~~~-~~v---~~~p~~~~~~~~~~~dg~~~--~v~~~~~g~~----------------------~~~~~--- 191 (361)
T 2oiz_A 149 ----AA--AGC-WSV---IPQPNRPRSFMTICGDGGLL--TINLGEDGKV----------------------ASQSR--- 191 (361)
T ss_dssp ----GG--TTE-EEE---EECTTSSSEEEEEETTSSEE--EEEECTTSSE----------------------EEEEE---
T ss_pred ----cC--CCc-cee---EEcCCCCeeEEEECCCCcEE--EEEECCCCcE----------------------eeecc---
Confidence 12 111 123 345654 5667777788877 7766441100 00000
Q ss_pred eEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-eEEEEecCCCCEEEEEcCC
Q psy10942 296 TVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGTQIVSTGAD 374 (537)
Q Consensus 296 ~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~l~~~~~d 374 (537)
...+|+... .++ .+.++|++..++..+.++.+.++|+...... ...
T Consensus 192 ~~~~~~~~~----------------~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~---------------- 238 (361)
T 2oiz_A 192 SKQMFSVKD----------------DPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGP---------------- 238 (361)
T ss_dssp CCCCSCTTT----------------SCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEE----------------
T ss_pred ccceEcCCC----------------Cce-EEEecccCCEEEEEeCCCeEEEEEecCCCceeccc----------------
Confidence 001122111 111 2223567777777778888998888622111 111
Q ss_pred CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-----------CCcEEEEECCC
Q psy10942 375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-----------DATIKLWCLTD 443 (537)
Q Consensus 375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------dg~i~i~d~~~ 443 (537)
|++...... ...+.|. +...++|+|+++.++++.. .+.|.+||+.+
T Consensus 239 -----~~~~~~~~~-----------~~~~~p~-------g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t 295 (361)
T 2oiz_A 239 -----WSLLNDEDK-----------AKNWVPG-------GYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT 295 (361)
T ss_dssp -----EESCCHHHH-----------HTTCEEC-------CSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT
T ss_pred -----ccccCcccc-----------ccccccC-------CeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC
Confidence 111100000 0000111 2223678888877776643 34899999999
Q ss_pred ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC--eeEEEecCCccceeccCCCCCCccccccceeeecC
Q psy10942 444 YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS--TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRN 521 (537)
Q Consensus 444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~ 521 (537)
++.+.++..+. +.+++|+|||++|++++. +.|.+||..++ +.+..+..+.... ..+ +++|+
T Consensus 296 ~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P-----------~~~---~~~p~ 358 (361)
T 2oiz_A 296 KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEAS-----------LQV---QFHPV 358 (361)
T ss_dssp TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSE-----------EEE---EECCC
T ss_pred CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCc-----------EEE---EecCC
Confidence 99999999876 899999999999998887 99999999999 9998876555555 677 99999
Q ss_pred CC
Q psy10942 522 SD 523 (537)
Q Consensus 522 ~~ 523 (537)
|+
T Consensus 359 G~ 360 (361)
T 2oiz_A 359 GG 360 (361)
T ss_dssp SC
T ss_pred CC
Confidence 86
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=4.8e-18 Score=159.30 Aligned_cols=104 Identities=7% Similarity=0.008 Sum_probs=80.8
Q ss_pred cCCcceEEEec------CcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------cc
Q psy10942 13 QITSEFSVHCG------RDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------EK 76 (537)
Q Consensus 13 ~~~~~~l~s~~------~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 76 (537)
.+++++++... .|+.|.+||.++++.+..++..... .+ .++| ++++++++. .+
T Consensus 12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i--~~sp--------dg~~lyv~~~~~~~~~~g~~~ 80 (361)
T 2oiz_A 12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HV--QVSN--------DGKKIYTMTTYHERITRGKRS 80 (361)
T ss_dssp SCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EE--EECT--------TSSEEEEEEEEETTSSSSCEE
T ss_pred CCCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ce--EECC--------CCCEEEEEEecccccccCCCC
Confidence 36777777753 3679999999999999888854433 44 6788 667777765 36
Q ss_pred ceEEeeeccceehhhhcCCC-------cceEEEEEeccccEEEEEeC--CceEEEEeccc
Q psy10942 77 SLLHYYETSAVKELYQHGLS-------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNS 127 (537)
Q Consensus 77 ~~i~~wd~~~~~~~~~~~~~-------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~ 127 (537)
+.|.+||+.+++.+.++... .....++|+|||++|+++.. ++.|.+||+.+
T Consensus 81 ~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 81 DVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp EEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred CEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 78999999988887666532 35678999999999998874 58999999998
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=3.3e-17 Score=154.51 Aligned_cols=284 Identities=9% Similarity=-0.023 Sum_probs=168.0
Q ss_pred ceEEeeec--cceeh--hhhc--CCCcceEEEEEeccccEEEEEeCCceEEEEecc-cccCcccccccccceeEEeecc-
Q psy10942 77 SLLHYYET--SAVKE--LYQH--GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLN-SETGLEERPNKILKFRKQFVGF- 148 (537)
Q Consensus 77 ~~i~~wd~--~~~~~--~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~- 148 (537)
+.|.+|++ .+++. +... .....+..++|+|||++|++++.+ .|.+|++. + +++.......
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~-----------g~~~~~~~~~~ 81 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSP-----------TEIVHEASHPI 81 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEET-----------TEEEEEEEEEC
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCC-----------CCEEEeeEeec
Confidence 45777765 44543 2222 122468899999999999998887 89999997 5 3333222211
Q ss_pred hhhhhhhhcccCCCccE--EEee-------ec----cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccc-cccc-
Q psy10942 149 SDEILDIALLGEEDSHI--VVAS-------NE----YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQS-SSQQ- 213 (537)
Q Consensus 149 ~~~v~~~~~~~~~~~~l--~~~~-------~~----~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~-~~~~- 213 (537)
.+.+..++|+ |+++++ +++. .. .+ +.+ .+|++ .. ++..
T Consensus 82 ~g~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~~--g~v-----------------~v~~~-------~~~g~~~~ 134 (365)
T 1jof_A 82 GGHPRANDAD-TNTRAIFLLAAKQPPYAVYANPFYKFA--GYG-----------------NVFSV-------SETGKLEK 134 (365)
T ss_dssp CSSGGGGCTT-SCCEEEEEEECSSTTCCEEEEEESSSC--CEE-----------------EEEEE-------CTTCCEEE
T ss_pred CCCCccEEEC-CCCCEEEEEEecCCcceeccceeecCC--ceE-----------------EEEcc-------CCCCcCcc
Confidence 1236779999 677753 3332 10 12 447 77877 42 2221
Q ss_pred -ccccccccCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEE
Q psy10942 214 -KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASG 291 (537)
Q Consensus 214 -l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 291 (537)
+... ...+ ...+.++ +|+|||++++++. .++.|. +|++..
T Consensus 135 ~~~~~-~~~~--~~~~~~~---~~spdG~~l~~~~~~~~~v~--~~~~~~------------------------------ 176 (365)
T 1jof_A 135 NVQNY-EYQE--NTGIHGM---VFDPTETYLYSADLTANKLW--THRKLA------------------------------ 176 (365)
T ss_dssp EEEEE-ECCT--TCCEEEE---EECTTSSEEEEEETTTTEEE--EEEECT------------------------------
T ss_pred eEeeE-EeCC--CCcceEE---EECCCCCEEEEEcCCCCEEE--EEEECC------------------------------
Confidence 1100 0024 5678899 9999999887654 345666 776651
Q ss_pred eCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccC-Cceee---EEEEecCCCC
Q psy10942 292 SLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTG-GLKLL---NVLRGHKKGT 366 (537)
Q Consensus 292 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~-~~~~~---~~~~~~~~~~ 366 (537)
+++..... ......|...+..++|+|||+++++++. ++.|.+|++.. .++.. ..+...+.+
T Consensus 177 ------------~g~~~~~~-~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~- 242 (365)
T 1jof_A 177 ------------SGEVELVG-SVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG- 242 (365)
T ss_dssp ------------TSCEEEEE-EEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT-
T ss_pred ------------CCCEEEee-eEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC-
Confidence 11100000 0000113456889999999999988775 68899998752 12221 111111100
Q ss_pred EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE-EcCCCCEEEEEeCC-C-----cEEEE
Q psy10942 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN-FSPLDRILISSSGD-A-----TIKLW 439 (537)
Q Consensus 367 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~d-g-----~i~i~ 439 (537)
+.++..+.. + ...+..++ |+|||++|+++..+ + .|.+|
T Consensus 243 ------------------------~~g~~~~~~-----~------~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~ 287 (365)
T 1jof_A 243 ------------------------IPDRDPETG-----K------GLYRADVCALTFSGKYMFASSRANKFELQGYIAGF 287 (365)
T ss_dssp ------------------------CCCBCTTTS-----S------BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEE
T ss_pred ------------------------cCCcccccc-----c------ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEE
Confidence 000000000 0 00366788 99999988877643 2 89999
Q ss_pred ECC-Cceeee---EeecCCcceEEEEEec---CCCEEEEEeCC-CcEEEEECCCC
Q psy10942 440 CLT-DYVCLK---SLEGHDASVLRCHFIN---KGTQIVSTGAD-GLLKLWSIKTS 486 (537)
Q Consensus 440 d~~-~~~~~~---~~~~~~~~v~~~~~s~---~~~~l~s~~~d-g~v~vwd~~~~ 486 (537)
++. +++... ....+...+..++|+| ||++|++++.+ +.|.+|+++..
T Consensus 288 ~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 288 KLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 986 565443 2333555677899999 89999999875 89999998765
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=4.8e-17 Score=153.41 Aligned_cols=158 Identities=9% Similarity=0.064 Sum_probs=107.6
Q ss_pred cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceee--EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCC
Q psy10942 319 HEKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLL--NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395 (537)
Q Consensus 319 ~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~--~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 395 (537)
+...+.+++|+|||++|+++.. ++.|++|++...++.. ..+... .+.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~------------------------------~~g 192 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP------------------------------DPG 192 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS------------------------------STT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC------------------------------CCC
Confidence 4467899999999998887764 6789999986211111 111100 000
Q ss_pred cceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-CCcEEEEECC--Cceee---eEee-------cCCc------c
Q psy10942 396 LKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-DATIKLWCLT--DYVCL---KSLE-------GHDA------S 456 (537)
Q Consensus 396 ~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~-------~~~~------~ 456 (537)
. .+..++|+|||+++++++. ++.|.+|++. +++.. ..+. +|.. .
T Consensus 193 ~-----------------~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 255 (365)
T 1jof_A 193 D-----------------HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLY 255 (365)
T ss_dssp C-----------------CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSE
T ss_pred C-----------------CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccc
Confidence 0 6778999999999988775 6899999765 45432 1222 1222 4
Q ss_pred eEEEE-EecCCCEEEEEeCCC------cEEEEECC-CCeeEEE---ecCCccceeccCCCCCCccccccceeeec---CC
Q psy10942 457 VLRCH-FINKGTQIVSTGADG------LLKLWSIK-TSTCVST---FDKHALKIRNSDSENDHKGFGLPRQLCSR---NS 522 (537)
Q Consensus 457 v~~~~-~s~~~~~l~s~~~dg------~v~vwd~~-~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~s~---~~ 522 (537)
+..++ |+|||++|+++..+. .|.+|++. ++++... ...+.... ..+ +|+| ||
T Consensus 256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~-----------~~~---a~sp~~~dg 321 (365)
T 1jof_A 256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG-----------HSN---AVSPCPWSD 321 (365)
T ss_dssp EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT-----------TCC---CEEECTTCT
T ss_pred cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc-----------ccc---eecCCCcCC
Confidence 78999 999999988776432 89999996 5665432 33344445 677 9999 89
Q ss_pred CEEEEEeCC-CCEEeC
Q psy10942 523 DCEYRGGWS-PQVVVY 537 (537)
Q Consensus 523 ~~l~s~~~d-g~i~vW 537 (537)
++|++++.+ +.|++|
T Consensus 322 ~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 322 EWMAITDDQEGWLEIY 337 (365)
T ss_dssp TEEEEECSSSCEEEEE
T ss_pred CEEEEEEcCCCeEEEE
Confidence 999999864 889887
No 168
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.78 E-value=1.6e-16 Score=156.32 Aligned_cols=329 Identities=12% Similarity=0.071 Sum_probs=209.2
Q ss_pred CCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc--ceehhh
Q psy10942 14 ITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS--AVKELY 91 (537)
Q Consensus 14 ~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~--~~~~~~ 91 (537)
+++.++++...++.|.++|.++++.+.+++.......+ .++| +++++++++.++.|.+||+. +++.+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v--~~Sp--------DGr~lyv~~~dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHIS--RLSA--------SGRYLFVIGRDGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEE--EECT--------TSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccce--EECC--------CCCEEEEEcCCCeEEEEECCCCCCcEeE
Confidence 44567777788999999999999999999877666666 6688 77888888889999999995 888887
Q ss_pred hcCCCcceEEEEEe----ccccEEEEEeC-CceEEEEecccccCcccccccccceeEEeecch----------h-hhhhh
Q psy10942 92 QHGLSSPLVRIVRS----SVKRMYAVVTA-DHNISLYRLNSETGLEERPNKILKFRKQFVGFS----------D-EILDI 155 (537)
Q Consensus 92 ~~~~~~~v~~~~~s----~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~v~~~ 155 (537)
++........++|| |||++++++.. +++|.++|..+ .+.++.+.... . .+..+
T Consensus 235 ~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t-----------~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 235 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-----------LEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-----------CCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred EEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC-----------CcEEEEEeccccccccccccCCCceEEE
Confidence 77766678899999 79999888775 58999999888 66666655321 1 34556
Q ss_pred hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEecc
Q psy10942 156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERG 234 (537)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~ 234 (537)
.++ +++..+++.. ... |.| .++|. ...... .. . ... ......+
T Consensus 304 ~~s-~~~~~~vv~~-~~~--g~v-----------------~~vd~-------~~~~~~~v~--~-i~~--~~~~~d~--- 347 (567)
T 1qks_A 304 LAS-HYRPEFIVNV-KET--GKI-----------------LLVDY-------TDLNNLKTT--E-ISA--ERFLHDG--- 347 (567)
T ss_dssp EEC-SSSSEEEEEE-TTT--TEE-----------------EEEET-------TCSSEEEEE--E-EEC--CSSEEEE---
T ss_pred EEc-CCCCEEEEEe-cCC--CeE-----------------EEEec-------CCCccceee--e-eec--cccccCc---
Confidence 666 3333333322 222 335 55554 222111 11 0 012 2345566
Q ss_pred CcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeec
Q psy10942 235 KTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLR 313 (537)
Q Consensus 235 ~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 313 (537)
.|+|+|++++++. .++.|. ++|.. +++....+..
T Consensus 348 ~~~pdgr~~~va~~~sn~V~--ViD~~-------------------------------------------t~kl~~~i~v 382 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLV--VIDTK-------------------------------------------EGKLVAIEDT 382 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEE--EEETT-------------------------------------------TTEEEEEEEC
T ss_pred eECCCCCEEEEEeCCCCeEE--EEECC-------------------------------------------CCcEEEEEec
Confidence 7888888776543 334444 44444 4432222111
Q ss_pred ccccccCCCeEEEEEcCCCCEE-EEEe-CCCcEEEEEccCC------ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942 314 GHKKGHEKDINCVTVSPNDKLL-ASGS-LDKTVKVWSTTGG------LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS 385 (537)
Q Consensus 314 ~~~~~~~~~v~~~~~s~~~~~l-~~~~-~d~~i~i~d~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 385 (537)
.....|.+.-..+ ++|++..+ +++. .++.|.++|.... .+.+..+.....
T Consensus 383 gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~--------------------- 440 (567)
T 1qks_A 383 GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG--------------------- 440 (567)
T ss_dssp SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS---------------------
T ss_pred cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC---------------------
Confidence 0112343322222 57875444 4443 4678999998731 223333332211
Q ss_pred eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-------CCcEEEEECCCc-----eee-eEee-
Q psy10942 386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-------DATIKLWCLTDY-----VCL-KSLE- 451 (537)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~i~i~d~~~~-----~~~-~~~~- 451 (537)
+-..+..+|+++++.+... .+.|.++|+.+. ... ..+.
T Consensus 441 ----------------------------g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~ 492 (567)
T 1qks_A 441 ----------------------------GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPI 492 (567)
T ss_dssp ----------------------------CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECH
T ss_pred ----------------------------CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecc
Confidence 2234667899998888663 358999999876 211 2222
Q ss_pred -------cCCcceEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeeEEEecC
Q psy10942 452 -------GHDASVLRCHFINKGTQIVSTG-----ADGLLKLWSIKTSTCVSTFDK 494 (537)
Q Consensus 452 -------~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~vwd~~~~~~~~~~~~ 494 (537)
.....+..+.|+|+|+++..+. .++.|.|+|.++++++..++.
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 493 AEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp HHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred ccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 1234688999999999887663 378999999999999988864
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=5.8e-18 Score=161.95 Aligned_cols=320 Identities=10% Similarity=-0.031 Sum_probs=185.7
Q ss_pred EeeeccceehhhhcCCCc------ceEEEEEeccccEEEEEeCC---ceEEEEecccccCcccccccccceeEEeecchh
Q psy10942 80 HYYETSAVKELYQHGLSS------PLVRIVRSSVKRMYAVVTAD---HNISLYRLNSETGLEERPNKILKFRKQFVGFSD 150 (537)
Q Consensus 80 ~~wd~~~~~~~~~~~~~~------~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (537)
...|..+++.+..+..+. .+..++|||||++|+..... ..|.+||+.+ ++.. .+..+..
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~-----------~~~~-~l~~~~~ 80 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET-----------QQAV-QLTEGKG 80 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----------TEEE-ECCCSSC
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCC-----------CcEE-EeecCCC
Confidence 344667776665555432 26778999999998887653 3688888887 3433 3333333
Q ss_pred h-hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeE
Q psy10942 151 E-ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTV 228 (537)
Q Consensus 151 ~-v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v 228 (537)
. ...+.|+ |+++.|+++..+.. + .+||+ .+++.. +. ..+ .
T Consensus 81 ~~~~~~~~s-pdg~~l~~~~~~~~----l-----------------~~~d~-------~~~~~~~~~----~~~--~--- 122 (396)
T 3c5m_A 81 DNTFGGFIS-TDERAFFYVKNELN----L-----------------MKVDL-------ETLEEQVIY----TVD--E--- 122 (396)
T ss_dssp BCTTTCEEC-TTSSEEEEEETTTE----E-----------------EEEET-------TTCCEEEEE----ECC--T---
T ss_pred CccccceEC-CCCCEEEEEEcCCc----E-----------------EEEEC-------CCCCcEEEE----ecc--c---
Confidence 3 3447899 78888888776665 8 88888 655544 22 022 1
Q ss_pred EEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEE-----EeCCCeEEEEECC
Q psy10942 229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLAS-----GSLDKTVKVWSTT 303 (537)
Q Consensus 229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-----~~~d~~i~i~~~~ 303 (537)
.|+++|+.|+....+.... +|..... ..+ .. +.++. ...+..|.+||+.
T Consensus 123 ------~~~~~g~~l~~~~~~~~~~--~~~~~~~-------~sp---------dg--~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 123 ------EWKGYGTWVANSDCTKLVG--IEILKRD-------WQP---------LT--SWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp ------TEEEEEEEEECTTSSEEEE--EEEEGGG-------CCC---------CC--SHHHHHHHHHTCCCEEEEEEETT
T ss_pred ------ccCCCCCEEEeccCCcccc--ccccccc-------cCC---------CC--cceeeeeeccCCCcceEEEEECC
Confidence 3456677777666655554 4432110 000 00 00000 0234678899998
Q ss_pred CCceeeeeecccccccCCCeEEEEEcC-CCCEEEEEeCCC------cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCc
Q psy10942 304 GGLKLLNVLRGHKKGHEKDINCVTVSP-NDKLLASGSLDK------TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 376 (537)
+++... +..+...+..+.|+| +++.|+..+.++ .|.+||+.
T Consensus 177 ~g~~~~------~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-------------------------- 224 (396)
T 3c5m_A 177 TGELEV------IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED-------------------------- 224 (396)
T ss_dssp TCCEEE------EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT--------------------------
T ss_pred CCcEEe------eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC--------------------------
Confidence 876421 224566789999999 788777765432 34444443
Q ss_pred EEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-----CcEEEEECCCceeeeEee
Q psy10942 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-----ATIKLWCLTDYVCLKSLE 451 (537)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~ 451 (537)
.++.......... ..+..++|+|||++|+.++.+ +.|++||+.+++......
T Consensus 225 -------~~~~~~l~~~~~~----------------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 225 -------GSNVRKIKEHAEG----------------ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp -------SCCCEESSCCCTT----------------EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred -------CCceeEeeccCCC----------------ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence 2221111110000 046678899999877776543 449999998876543332
Q ss_pred cCCcceEEEEEec-CCCEEEEEe----------------CCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccccc
Q psy10942 452 GHDASVLRCHFIN-KGTQIVSTG----------------ADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLP 514 (537)
Q Consensus 452 ~~~~~v~~~~~s~-~~~~l~s~~----------------~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 514 (537)
... .. +.|+| ||+++++++ .+..|++||+.+++.. .+..+...+.............+
T Consensus 282 -~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~- 356 (396)
T 3c5m_A 282 -MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHP- 356 (396)
T ss_dssp -CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCC-
T ss_pred -CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCc-
Confidence 112 33 89999 999888765 2468999999887653 44444331000000000000556
Q ss_pred ceeeecCCCEEEEEeC-CCCEEeC
Q psy10942 515 RQLCSRNSDCEYRGGW-SPQVVVY 537 (537)
Q Consensus 515 ~~~~s~~~~~l~s~~~-dg~i~vW 537 (537)
+|+|||+.|+.++. ++...||
T Consensus 357 --~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 357 --SFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp --EECTTSSEEEEEECTTSSCEEE
T ss_pred --eEccCCCeEEEEecCCCCceEE
Confidence 99999998887664 5555554
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=3.4e-18 Score=163.07 Aligned_cols=310 Identities=10% Similarity=-0.037 Sum_probs=180.7
Q ss_pred EEEEcCccceeeeeccccc-ccee---eeEeecCccccccCCcEEEEEeCc-cc--eEEeeeccceehhhhcCCCc-ceE
Q psy10942 29 FTWDLSSRKQLRSYPAYES-LETC---AVFHLSDETESKSGGKTFVLAGGE-KS--LLHYYETSAVKELYQHGLSS-PLV 100 (537)
Q Consensus 29 ~iwd~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~--~i~~wd~~~~~~~~~~~~~~-~v~ 100 (537)
..+|..++..+..+..... .... ...++| ++++|+..+. ++ .|.+||+.+++.......+. .+.
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~Sp--------Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~ 84 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTR--------DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF 84 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCT--------TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCC--------CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc
Confidence 3457778877776653322 1110 014567 5566666554 56 48888999988776666554 344
Q ss_pred EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhc--ccCCCccEEEeeeccc-----
Q psy10942 101 RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIAL--LGEEDSHIVVASNEYL----- 173 (537)
Q Consensus 101 ~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~~~~----- 173 (537)
.++|||||+.|+.++.++.|++||+.+ ++.......+...+....| + +++..++.......
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~ 152 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLAT-----------LEENVVYQVPAEWVGYGTWVAN-SDCTKLVGIEIRREDWVPL 152 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTT-----------CCEEEEEECCTTEEEEEEEEEC-TTSSEEEEEEEEGGGCCCC
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCC-----------CcceeeeechhhcccccceeEC-CCCCeeccccccCcccccc
Confidence 678999999999999999999999998 4555455555444433333 5 56666653321111
Q ss_pred -------------cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCccc-
Q psy10942 174 -------------NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVK- 238 (537)
Q Consensus 174 -------------~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~- 238 (537)
....| .+||+ .+++.. +. .+ ...+..+ +|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~l-----------------~~~d~-------~~g~~~~l~-----~~--~~~~~~~---~~sp~ 198 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRL-----------------MRVDL-------KTGESTVIL-----QE--NQWLGHP---IYRPY 198 (388)
T ss_dssp CSHHHHHHHGGGCCCEEE-----------------EEEET-------TTCCEEEEE-----EE--SSCEEEE---EEETT
T ss_pred cccchhhhhhccCCcceE-----------------EEEEC-------CCCceEEee-----cC--Ccccccc---EECCC
Confidence 00113 45555 555444 44 55 6678888 8999
Q ss_pred CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG 318 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 318 (537)
||+.|+....++ ++.. ...|.+++..++.. ..+..
T Consensus 199 dg~~l~~~~~~~------~~~~---------------------------------~~~l~~~d~~~~~~------~~l~~ 233 (388)
T 3pe7_A 199 DDSTVAFCHEGP------HDLV---------------------------------DARMWLINEDGTNM------RKVKT 233 (388)
T ss_dssp EEEEEEEEECSC------TTTS---------------------------------SCSEEEEETTSCCC------EESCC
T ss_pred CCCEEEEEEecC------CCCC---------------------------------cceEEEEeCCCCce------EEeee
Confidence 998887665421 0000 12455556554432 11122
Q ss_pred cC--CCeEEEEEcCCCCEEEEEeC-CC----cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeee
Q psy10942 319 HE--KDINCVTVSPNDKLLASGSL-DK----TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTF 391 (537)
Q Consensus 319 ~~--~~v~~~~~s~~~~~l~~~~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 391 (537)
+. ..+..++|+|||+.|+..+. ++ .|++||+. +++...... +
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~-~g~~~~l~~------------------------------~ 282 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE-TLENRQLTS------------------------------M 282 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT-TCCEEEEEE------------------------------E
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC-CCceEEEEc------------------------------C
Confidence 22 24778899999997765443 22 27777766 222111111 0
Q ss_pred ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE---------eCCCcEEEEECCCceeeeEeecCCc-------
Q psy10942 392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS---------SGDATIKLWCLTDYVCLKSLEGHDA------- 455 (537)
Q Consensus 392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---------~~dg~i~i~d~~~~~~~~~~~~~~~------- 455 (537)
.. .......+ ..++|+|||+.|+.. ..+..|++||+.+++. ..+..|..
T Consensus 283 ~~----~~~~~~~~----------~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~ 347 (388)
T 3pe7_A 283 PA----CSHLMSNY----------DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEG 347 (388)
T ss_dssp CC----EEEEEECT----------TSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTT
T ss_pred CC----ceeeeecC----------CCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCccccccc
Confidence 00 00000111 112577787776653 4567899999998765 44555555
Q ss_pred ----ceEEEEEecCCCEEEEEeC-CCcEEEEEC
Q psy10942 456 ----SVLRCHFINKGTQIVSTGA-DGLLKLWSI 483 (537)
Q Consensus 456 ----~v~~~~~s~~~~~l~s~~~-dg~v~vwd~ 483 (537)
.+..++|+|||+.|+..+. +|...+|.+
T Consensus 348 ~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 348 DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp BSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 5788999999998887664 666666654
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=3.8e-16 Score=144.87 Aligned_cols=262 Identities=10% Similarity=0.042 Sum_probs=181.9
Q ss_pred cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG 304 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~ 304 (537)
-+.+.++ +++|+|+++++...++.+. ++...... .+..+.... ..++.|.+||..+
T Consensus 23 l~~v~~v---a~d~~G~l~v~~~~~~~~~--~~~~~~~~------------~~~~~~~~~-------~~~~~i~~~d~~~ 78 (329)
T 3fvz_A 23 PGQVSGV---ALDSKNNLVIFHRGDHVWD--GNSFDSKF------------VYQQRGLGP-------IEEDTILVIDPNN 78 (329)
T ss_dssp CSCEEEE---EECTTCCEEEEECTTCCCC--TTSBCTTS------------CBSCGGGCS-------CCSCCEEEECTTT
T ss_pred cCCceEE---EECCCCCEEEEeCCCCeEE--eeccCcce------------eeccccccc-------ccCCcEEEEECCC
Confidence 5679999 9999999999988888777 76655421 111111111 1367899999987
Q ss_pred CceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-------------------eEEEEecC-C
Q psy10942 305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-------------------LNVLRGHK-K 364 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-------------------~~~~~~~~-~ 364 (537)
++..... ...+......++++|+|+++++...++.|++||....... ...+...+ +
T Consensus 79 g~~~~~~----~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~ 154 (329)
T 3fvz_A 79 AEILQSS----GKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST 154 (329)
T ss_dssp CCEEEEE----CTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT
T ss_pred CeEEecc----CCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC
Confidence 7653221 1244457899999999998888888899999998632112 23345555 6
Q ss_pred CCEEEEEc-CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC-CCEEEEEeCCCcEEEEECC
Q psy10942 365 GTQIVSTG-ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL-DRILISSSGDATIKLWCLT 442 (537)
Q Consensus 365 ~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~ 442 (537)
+.++++.+ .++.|++|| .+++.+..+....... .+.... ......++++|+ ++++++...++.|++||..
T Consensus 155 g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~-----~~~~~~--~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 155 GAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGS-----SPRPGQ--FSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp CCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSS-----SCCTTE--ESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCC-----CCCCcc--cCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 77777776 689999999 5566555543211100 000000 014788999998 7777777788999999999
Q ss_pred CceeeeEee--cCCcceEEEEEecCCCEEEEE-------eCCCcEEEEECCCCeeEEEec---CCccceeccCCCCCCcc
Q psy10942 443 DYVCLKSLE--GHDASVLRCHFINKGTQIVST-------GADGLLKLWSIKTSTCVSTFD---KHALKIRNSDSENDHKG 510 (537)
Q Consensus 443 ~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~-------~~dg~v~vwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~ 510 (537)
+++.+..+. .+...+..++|+| +..+++. ..+..|++|+..+++.+..+. ++....
T Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p----------- 294 (329)
T 3fvz_A 227 TKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMP----------- 294 (329)
T ss_dssp TCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSE-----------
T ss_pred CCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCe-----------
Confidence 888888874 3556788999999 4333333 334589999999999998874 444445
Q ss_pred ccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 511 FGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 511 ~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.++ +++|+|.++++...++.|++|
T Consensus 295 ~~i---a~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 295 HDI---VASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp EEE---EECTTSEEEEEESSSCCEEEE
T ss_pred eEE---EECCCCCEEEEECCCCEEEEE
Confidence 778 999999888888889999876
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=6.1e-17 Score=165.82 Aligned_cols=300 Identities=11% Similarity=-0.027 Sum_probs=181.6
Q ss_pred CcEEEEEe--CccceEEeeeccceehhhhcCCC-cceE---------EEEEe--ccccE-EEEEeC-CceEEEEecc--c
Q psy10942 66 GKTFVLAG--GEKSLLHYYETSAVKELYQHGLS-SPLV---------RIVRS--SVKRM-YAVVTA-DHNISLYRLN--S 127 (537)
Q Consensus 66 ~~~~~~~~--~~~~~i~~wd~~~~~~~~~~~~~-~~v~---------~~~~s--~~~~~-la~~~~-d~~i~iwd~~--~ 127 (537)
+..+++.. +.++...+|....+.....+..+ ..+. ..+|+ |||++ |+.++. +..|.++++. +
T Consensus 34 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g 113 (662)
T 3azo_A 34 DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPG 113 (662)
T ss_dssp TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTT
T ss_pred CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCC
Confidence 65666666 56788899986444444444433 3444 55565 99999 877654 4456666655 1
Q ss_pred ccCcccccccccceeEEeec-----chhhhhhhhcccCCCccEEEeeecc------ccCCcccceeecccCCCcchhhHH
Q psy10942 128 ETGLEERPNKILKFRKQFVG-----FSDEILDIALLGEEDSHIVVASNEY------LNGGDLSGLVKLGANRSHNEWFDK 196 (537)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~ 196 (537)
....+.+.. |...+..++|+ |+++.|++++.+. .....| .
T Consensus 114 -----------~~~~~~l~~~~~~~~~~~~~~~~~s-pDg~~l~~~~~~~~~~~~~~~~~~i-----------------~ 164 (662)
T 3azo_A 114 -----------GAVPRPLTPVSAVGGGLRWADPVLL-PERGEVWCMAEEFTGEGPSDVRRFL-----------------A 164 (662)
T ss_dssp -----------CCCCEECSCCCCSTTCEEEEEEEEE-TTTTEEEEEEEEECSSSTTCEEEEE-----------------E
T ss_pred -----------CCCCEeccCCccCCCCccccCcEEC-CCCCEEEEEEecccCCCCCCceeEE-----------------E
Confidence 022334444 56678899999 7888888877652 111237 7
Q ss_pred HHHHHHHhhhccc------cccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccc
Q psy10942 197 TFERILEAKFKQS------SSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFG 268 (537)
Q Consensus 197 ~wd~~~~~~~~~~------~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~ 268 (537)
+||+ .+ +... .. .+ ...+..+ +|||||++|+..+.++... -|+.
T Consensus 165 ~~~~-------~~~~~~~~~~~~~l~~-----~~--~~~~~~~---~~SpDG~~la~~~~~~~~~--~~~~--------- 216 (662)
T 3azo_A 165 AVPL-------DGSAAADRSAVRELSD-----DA--HRFVTGP---RLSPDGRQAVWLAWDHPRM--PWEG--------- 216 (662)
T ss_dssp EEET-------TSTTTTCGGGSEESSC-----SC--SSEECCC---EECTTSSEEEEEEECTTCC--TTTC---------
T ss_pred EEEC-------CCCccccCCceeEEEe-----cC--CCcccCc---eECCCCCEEEEEECCCCCC--CCCC---------
Confidence 8887 55 3333 21 34 4677788 9999999999877665444 3431
Q ss_pred ccccccceeeeeeCCcceEEEEEeCCCeEEEEECC-CCc--eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCc--
Q psy10942 269 IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT-GGL--KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT-- 343 (537)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~-~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-- 343 (537)
..|++||+. ++. .. ......|...+..++|+|||++++++..++.
T Consensus 217 --------------------------~~i~~~d~~~~g~~~~~----~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~ 266 (662)
T 3azo_A 217 --------------------------TELKTARVTEDGRFADT----RTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWN 266 (662)
T ss_dssp --------------------------EEEEEEEECTTSCEEEE----EEEEEETTBCEEEEEECTTSCEEEEECTTSSCE
T ss_pred --------------------------cEEEEEEECCCCccccc----EEeCCCCCceEcceEECCCCeEEEEECCCCCeE
Confidence 257788887 341 21 1222345678999999999998888877874
Q ss_pred EEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942 344 VKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL 423 (537)
Q Consensus 344 i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (537)
|.+||+. ..+... +..+ ...+....+++ .+..++|+|+
T Consensus 267 l~~~~~~-~~~~~~-l~~~--------------------------------~~~~~~p~w~~--------~~~~~~~~~~ 304 (662)
T 3azo_A 267 LHRVDPA-TGAATQ-LCRR--------------------------------EEEFAGPLWTP--------GMRWFAPLAN 304 (662)
T ss_dssp EEEECTT-TCCEEE-SSCC--------------------------------SSBSSCCCCST--------TCCSEEECTT
T ss_pred EEEEECC-CCceee-cccc--------------------------------cccccCccccc--------cCceEeEeCC
Confidence 4444443 222111 1100 00011111221 2456889999
Q ss_pred CCEEEEEeCCCcEEEE--ECCCceeeeEeecCCcceEEE-EEecCCCEEEEEeCCC--cEEEEECCCCeeEEEecCCc
Q psy10942 424 DRILISSSGDATIKLW--CLTDYVCLKSLEGHDASVLRC-HFINKGTQIVSTGADG--LLKLWSIKTSTCVSTFDKHA 496 (537)
Q Consensus 424 ~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~ 496 (537)
+++++++.. +.+++| |+.+++ +..+..|...+..+ .++++.-++++++.+. .|.++|+.+++.......+.
T Consensus 305 ~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~ 380 (662)
T 3azo_A 305 GLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHT 380 (662)
T ss_dssp SCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCC
T ss_pred CEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCc
Confidence 999999998 999999 655555 67777777777776 4444333344445554 46666777777654444443
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=4.9e-17 Score=155.49 Aligned_cols=304 Identities=9% Similarity=-0.041 Sum_probs=172.3
Q ss_pred EEEEcCccceeeeeccccc------cceeeeEeecCccccccCCcEEEEEe-Cc--cceEEeeeccceehhhhcCCCcce
Q psy10942 29 FTWDLSSRKQLRSYPAYES------LETCAVFHLSDETESKSGGKTFVLAG-GE--KSLLHYYETSAVKELYQHGLSSPL 99 (537)
Q Consensus 29 ~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~i~~wd~~~~~~~~~~~~~~~v 99 (537)
...|..+++.+..+..... +... .++| ++++++.. .. +..|.+||+.+++...........
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~--~~Sp--------dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~ 82 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQK--CFTQ--------DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDN 82 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSC--CBCT--------TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBC
T ss_pred eeecCCCCcceEEEecCCCCccceeeecC--cCCC--------CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCc
Confidence 4458888887776653221 3344 4577 55555544 32 346888999888765444444433
Q ss_pred E-EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhh-------------------hhccc
Q psy10942 100 V-RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILD-------------------IALLG 159 (537)
Q Consensus 100 ~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~ 159 (537)
. .+.|||||++|+.++.++.|++||+.+ ++.......+...... +.|+
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~-----------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s- 150 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLET-----------LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQ- 150 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTT-----------CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC-
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCC-----------CCcEEEEecccccCCCCCEEEeccCCccccccccccccC-
Confidence 3 378999999999999999999999988 3433333333321111 3444
Q ss_pred CCCccEEEeee---ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccC
Q psy10942 160 EEDSHIVVASN---EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGK 235 (537)
Q Consensus 160 ~~~~~l~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~ 235 (537)
|+++.+++... ... ..| .+||+ .+++.. +. .+ ...+..+ .
T Consensus 151 pdg~~~~~~~~~~~~~~--~~l-----------------~~~d~-------~~g~~~~~~-----~~--~~~~~~~---~ 194 (396)
T 3c5m_A 151 PLTSWEKFAEFYHTNPT--CRL-----------------IKVDI-------ETGELEVIH-----QD--TAWLGHP---I 194 (396)
T ss_dssp CCCSHHHHHHHHHTCCC--EEE-----------------EEEET-------TTCCEEEEE-----EE--SSCEEEE---E
T ss_pred CCCcceeeeeeccCCCc--ceE-----------------EEEEC-------CCCcEEeec-----cC--Ccccccc---e
Confidence 34443332210 111 124 55666 555444 43 45 5667788 8
Q ss_pred ccc-CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecc
Q psy10942 236 TVK-EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRG 314 (537)
Q Consensus 236 ~s~-~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 314 (537)
|+| +++.|+..+.++. +. ....|.+|++.++... .
T Consensus 195 ~sp~dg~~l~~~~~~~~------~~---------------------------------~~~~l~~~d~~~~~~~-----~ 230 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPH------DL---------------------------------VDARMWLVNEDGSNVR-----K 230 (396)
T ss_dssp EETTEEEEEEEEECSCS------SS---------------------------------CSCCCEEEETTSCCCE-----E
T ss_pred ECCCCCCEEEEEecCCC------CC---------------------------------CCceEEEEECCCCcee-----E
Confidence 888 7776665443211 00 0124555665544311 1
Q ss_pred ccccc-CCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeee
Q psy10942 315 HKKGH-EKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCV 388 (537)
Q Consensus 315 ~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 388 (537)
..... ...+..++|+|+|+.|+.++.+ +.|++||+. +++..
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---------------------------------~g~~~ 277 (396)
T 3c5m_A 231 IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE---------------------------------TLENE 277 (396)
T ss_dssp SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT---------------------------------TCCEE
T ss_pred eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC---------------------------------CCCeE
Confidence 11111 2347789999999987776543 226666654 22211
Q ss_pred eeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEe----------------CCCcEEEEECCCceeeeEee
Q psy10942 389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSS----------------GDATIKLWCLTDYVCLKSLE 451 (537)
Q Consensus 389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~i~d~~~~~~~~~~~ 451 (537)
...... ... +.|+| ||+++++++ .+..|++||+.+++. ..+.
T Consensus 278 ~l~~~~-------------------~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~ 336 (396)
T 3c5m_A 278 EVMVMP-------------------PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLC 336 (396)
T ss_dssp EEEECC-------------------SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEE
T ss_pred EeeeCC-------------------CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEcc
Confidence 110000 111 56777 888777654 347899999988764 3454
Q ss_pred cCCc-----------ceEEEEEecCCCEEEEEeC-CCcE--EEEECCCCee
Q psy10942 452 GHDA-----------SVLRCHFINKGTQIVSTGA-DGLL--KLWSIKTSTC 488 (537)
Q Consensus 452 ~~~~-----------~v~~~~~s~~~~~l~s~~~-dg~v--~vwd~~~~~~ 488 (537)
.+.. .+..++|+|||+.|+.++. ++.. +.+++.+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 4544 2567899999999887765 4544 4445555443
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=3.7e-16 Score=159.95 Aligned_cols=204 Identities=9% Similarity=-0.022 Sum_probs=129.6
Q ss_pred eeeeeeeeccCCcceEEEe--cCcceEEEEEcCccceeeeec-cccccc-------eeeeEee--cCccccccCCcE-EE
Q psy10942 4 CVTCFDVIPQITSEFSVHC--GRDKVLFTWDLSSRKQLRSYP-AYESLE-------TCAVFHL--SDETESKSGGKT-FV 70 (537)
Q Consensus 4 ~V~~~~~~~~~~~~~l~s~--~~~g~v~iwd~~~~~~~~~~~-~~~~~~-------~~~~~~~--~~~~~~~~~~~~-~~ 70 (537)
.|..++|+ +++-++++. ++++...||....+...+.+. ....+. ...+.++ |+ +.. ++
T Consensus 25 ~~~~~~~s--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD-------g~~~la 95 (662)
T 3azo_A 25 RPACVGAV--GDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPA-------GGPLLV 95 (662)
T ss_dssp CCEEEEEE--TTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSS-------SSCEEE
T ss_pred ccceeEEc--CCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecC-------CCeEEE
Confidence 46788899 787778877 678899999964444444333 222322 0122344 63 334 34
Q ss_pred EEeCccceEEeeecc--c-eehhhhcCC------CcceEEEEEeccccEEEEEeCC----------ceEEEEecccccCc
Q psy10942 71 LAGGEKSLLHYYETS--A-VKELYQHGL------SSPLVRIVRSSVKRMYAVVTAD----------HNISLYRLNSETGL 131 (537)
Q Consensus 71 ~~~~~~~~i~~wd~~--~-~~~~~~~~~------~~~v~~~~~s~~~~~la~~~~d----------~~i~iwd~~~~~~~ 131 (537)
++...+..|.++++. . ++ ...+.. ...+..++|||||+.|++++.+ ..|++||+.+....
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 444446677777776 3 43 333332 3578999999999999998877 58999998771000
Q ss_pred ccccccccceeEEee-cchhhhhhhhcccCCCccEEEeeeccc----cCCcccceeecccCCCcchhhHHHHHHHHHhhh
Q psy10942 132 EERPNKILKFRKQFV-GFSDEILDIALLGEEDSHIVVASNEYL----NGGDLSGLVKLGANRSHNEWFDKTFERILEAKF 206 (537)
Q Consensus 132 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~ 206 (537)
. ....+.+. .+...+..++|+ ||++.|++++.+.. ....| ++||+
T Consensus 175 -----~-~~~~~~l~~~~~~~~~~~~~S-pDG~~la~~~~~~~~~~~~~~~i-----------------~~~d~------ 224 (662)
T 3azo_A 175 -----D-RSAVRELSDDAHRFVTGPRLS-PDGRQAVWLAWDHPRMPWEGTEL-----------------KTARV------ 224 (662)
T ss_dssp -----C-GGGSEESSCSCSSEECCCEEC-TTSSEEEEEEECTTCCTTTCEEE-----------------EEEEE------
T ss_pred -----c-CCceeEEEecCCCcccCceEC-CCCCEEEEEECCCCCCCCCCcEE-----------------EEEEE------
Confidence 0 02233444 555678889999 78888887775542 01236 77887
Q ss_pred cc-cc---ccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceecccccc
Q psy10942 207 KQ-SS---SQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRK 260 (537)
Q Consensus 207 ~~-~~---~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~ 260 (537)
. ++ +.. .. +| ...+..+ .|+|||++++++..++... +|.++
T Consensus 225 -~~~g~~~~~~~l~~-----~~--~~~~~~~---~~spdg~l~~~~~~~~~~~--l~~~~ 271 (662)
T 3azo_A 225 -TEDGRFADTRTLLG-----GP--EEAIAQA---EWAPDGSLIVATDRTGWWN--LHRVD 271 (662)
T ss_dssp -CTTSCEEEEEEEEE-----ET--TBCEEEE---EECTTSCEEEEECTTSSCE--EEEEC
T ss_pred -CCCCcccccEEeCC-----CC--CceEcce---EECCCCeEEEEECCCCCeE--EEEEE
Confidence 6 34 322 33 56 6788999 9999999777887777555 55443
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=7e-15 Score=144.70 Aligned_cols=319 Identities=11% Similarity=0.051 Sum_probs=201.9
Q ss_pred CcEEEEEeCccceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecc--cccCcccccccccceeE
Q psy10942 66 GKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLN--SETGLEERPNKILKFRK 143 (537)
Q Consensus 66 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~ 143 (537)
+..++++...++.|.++|..+++.+.++.....+..++|||||++|++++.|+.|.+||+. + .+.+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t-----------~~~v~ 234 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE-----------PTTVA 234 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS-----------CCEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCC-----------CcEeE
Confidence 4577888888999999999999999888877788899999999999999999999999996 5 56666
Q ss_pred Eeecchhhhhhhhccc---CCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccc
Q psy10942 144 QFVGFSDEILDIALLG---EEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTE 218 (537)
Q Consensus 144 ~~~~~~~~v~~~~~~~---~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~ 218 (537)
++..... ...++|++ |++++++++.... +.+ .++|. .+.+.+ +....
T Consensus 235 ~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~---~~v-----------------~ViD~-------~t~~~~~~i~~~~ 286 (567)
T 1qks_A 235 EIKIGSE-ARSIETSKMEGWEDKYAIAGAYWP---PQY-----------------VIMDG-------ETLEPKKIQSTRG 286 (567)
T ss_dssp EEECCSE-EEEEEECCSTTCTTTEEEEEEEET---TEE-----------------EEEET-------TTCCEEEEEECCE
T ss_pred EEecCCC-CceeEEccccCCCCCEEEEEEccC---CeE-----------------EEEEC-------CCCcEEEEEeccc
Confidence 6665443 57889995 5888887765542 336 66676 554443 11000
Q ss_pred --cc---cCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeC
Q psy10942 219 --RL---GRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSL 293 (537)
Q Consensus 219 --~~---~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 293 (537)
.. .|. ...+..+ ..++++.. +++....
T Consensus 287 ~~~~~~~~~p-~~rva~i---~~s~~~~~--------------------------------------------~vv~~~~ 318 (567)
T 1qks_A 287 MTYDEQEYHP-EPRVAAI---LASHYRPE--------------------------------------------FIVNVKE 318 (567)
T ss_dssp ECTTTCCEES-CCCEEEE---EECSSSSE--------------------------------------------EEEEETT
T ss_pred cccccccccC-CCceEEE---EEcCCCCE--------------------------------------------EEEEecC
Confidence 00 010 1123334 33433222 2233334
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEEe-cCCCCEEEEE
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLRG-HKKGTQIVST 371 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~~~~~~l~~~ 371 (537)
+|.|.++|......+... . ........++.|+|++++++++. .++.|.++|+. ..+.+..+.. ...
T Consensus 319 ~g~v~~vd~~~~~~~~v~---~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~-t~kl~~~i~vgg~~------- 386 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTT---E-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK-EGKLVAIEDTGGQT------- 386 (567)
T ss_dssp TTEEEEEETTCSSEEEEE---E-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT-TTEEEEEEECSSSS-------
T ss_pred CCeEEEEecCCCccceee---e-eeccccccCceECCCCCEEEEEeCCCCeEEEEECC-CCcEEEEEeccCcC-------
Confidence 466666666554321110 1 11233466889999999887765 56789999988 5555544432 100
Q ss_pred cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC-CEEEEEe-CCCcEEEEECCC------
Q psy10942 372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD-RILISSS-GDATIKLWCLTD------ 443 (537)
Q Consensus 372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~-~dg~i~i~d~~~------ 443 (537)
.|... ++. -++|++ ..+++.. .++.|.++|..+
T Consensus 387 ---------------------Phpg~----------------g~~--~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~ 427 (567)
T 1qks_A 387 ---------------------PHPGR----------------GAN--FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDN 427 (567)
T ss_dssp ---------------------BCCTT----------------CEE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred ---------------------CCCcc----------------cee--eECCCCCcEEEeCCCCCCeEEEecCCCCCCccc
Confidence 01000 111 146764 4444443 468999999987
Q ss_pred -ceeeeEeecCCcceEEEEEecCCCEEEEEeC-------CCcEEEEECCCC-----e-eEEEecC--------Cccceec
Q psy10942 444 -YVCLKSLEGHDASVLRCHFINKGTQIVSTGA-------DGLLKLWSIKTS-----T-CVSTFDK--------HALKIRN 501 (537)
Q Consensus 444 -~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------dg~v~vwd~~~~-----~-~~~~~~~--------~~~~i~~ 501 (537)
++.+.++......-..+..+|++++|.+... .++|.++|+.+. . ....+.. ....+
T Consensus 428 ~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 505 (567)
T 1qks_A 428 AWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRV-- 505 (567)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEE--
T ss_pred cCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcce--
Confidence 6788888765444455788999999998763 358999999876 2 1122321 11233
Q ss_pred cCCCCCCccccccceeeecCCCEEEEEeC-----CCCEEe
Q psy10942 502 SDSENDHKGFGLPRQLCSRNSDCEYRGGW-----SPQVVV 536 (537)
Q Consensus 502 ~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-----dg~i~v 536 (537)
..+ .|+|+|+.+..+.. ++.|.|
T Consensus 506 ---------~~~---~~~~~G~~~~~s~~~~~~~~~~i~v 533 (567)
T 1qks_A 506 ---------VQG---EFNKDGTEVWFSVWNGKDQESALVV 533 (567)
T ss_dssp ---------EEE---EECTTSSEEEEEEECCTTSCCEEEE
T ss_pred ---------Eee---eECCCCCEEEEEeecCCCCCCcEEE
Confidence 666 99999998877633 566654
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=7.9e-14 Score=126.61 Aligned_cols=107 Identities=11% Similarity=0.170 Sum_probs=84.0
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--CcceEEEEEecCCCEEEEEeCCC-cEEEEECCCCeeEE
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--DASVLRCHFINKGTQIVSTGADG-LLKLWSIKTSTCVS 490 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg-~v~vwd~~~~~~~~ 490 (537)
.+..++++|+++++++...++.|++||.. ++.+..+..+ ...+..++++++|+++++...++ .|++|+. +++.+.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~ 242 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLIS 242 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEE
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEE
Confidence 56789999999988887788999999974 5566666433 35689999999999888888776 9999995 677777
Q ss_pred EecCCcc--ceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 491 TFDKHAL--KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 491 ~~~~~~~--~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.+..+.. .+ .++ +++|+|+++++ +.|+.|++|
T Consensus 243 ~~~~~~~~~~~-----------~~i---~~~~~g~l~vs-~~~~~v~v~ 276 (286)
T 1q7f_A 243 ALESKVKHAQC-----------FDV---ALMDDGSVVLA-SKDYRLYIY 276 (286)
T ss_dssp EEEESSCCSCE-----------EEE---EEETTTEEEEE-ETTTEEEEE
T ss_pred EEcccCCCCcc-----------eeE---EECCCCcEEEE-CCCCeEEEE
Confidence 7765432 23 577 99999987776 679999987
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=8.9e-15 Score=137.02 Aligned_cols=285 Identities=8% Similarity=0.019 Sum_probs=170.3
Q ss_pred cceEEEEEeccccEEEEEe---------CCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEE
Q psy10942 97 SPLVRIVRSSVKRMYAVVT---------ADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVV 167 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 167 (537)
..+...++ ||+++|... .++.|.+||+.+ .+. +.+ ..+..++|+ |+++.|++
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~-----------~~~-~~l----~~~~~~~~S-pDg~~la~ 75 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKN-----------NAR-RFI----ENATMPRIS-PDGKKIAF 75 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTT-----------CCE-EEE----ESCEEEEEC-TTSSEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCC-----------Cce-EEc----ccCCCeEEC-CCCCEEEE
Confidence 46777888 999887753 256799999987 332 233 347788999 78888887
Q ss_pred eeecc-ccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeee
Q psy10942 168 ASNEY-LNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPR 245 (537)
Q Consensus 168 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~ 245 (537)
+.... .....| .+|++ .+++.. +. .+ .. +..+ +|+|||+.|+.
T Consensus 76 ~~~~~~~~~~~l-----------------~~~~~-------~~g~~~~l~-----~~--~~-~~~~---~wspdg~~l~~ 120 (347)
T 2gop_A 76 MRANEEKKVSEI-----------------WVADL-------ETLSSKKIL-----EA--KN-IRSL---EWNEDSRKLLI 120 (347)
T ss_dssp EEEETTTTEEEE-----------------EEEET-------TTTEEEEEE-----EE--SE-EEEE---EECTTSSEEEE
T ss_pred EEeccCCCcceE-----------------EEEEC-------CCCceEEEE-----cC--CC-ccce---eECCCCCEEEE
Confidence 76543 101236 66677 666555 44 44 34 8899 99999999987
Q ss_pred ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE
Q psy10942 246 QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC 325 (537)
Q Consensus 246 ~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~ 325 (537)
++.+..-. .. ... ...+...... .. ........|.+||+.+++....+ .. . .+..
T Consensus 121 ~~~~~~~~------~~----~~~-----~~~~~~~~~g--~~-~~~~~~~~l~~~d~~~~~~~~~l-----~~-~-~~~~ 175 (347)
T 2gop_A 121 VGFKRRED------ED----FIF-----EDDVPAWFDD--LG-FFDGEKTTFWIFDTESEEVIEEF-----EK-P-RFSS 175 (347)
T ss_dssp EEECCCC------------------------CCCC------------CEEEEEEEETTTTEEEEEE-----EE-E-TTCE
T ss_pred EEccCCCc------CC----cEE-----EcccceeecC--cc-cccCccceEEEEECCCCeEEeee-----cC-C-Cccc
Confidence 76431000 00 000 0000000000 00 00112357899999887642222 12 2 6788
Q ss_pred EEEcCCCCEEEEEeCCC-------cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcce
Q psy10942 326 VTVSPNDKLLASGSLDK-------TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 398 (537)
Q Consensus 326 ~~~s~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 398 (537)
++|+||| +++++..+. ...+| ++| +++.. .+..+ .
T Consensus 176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~-------------------------------~~d--~~~~~-~l~~~-~-- 217 (347)
T 2gop_A 176 GIWHRDK-IVVNVPHREIIPQYFKFWDIY-------------------------------IWE--DGKEE-KMFEK-V-- 217 (347)
T ss_dssp EEEETTE-EEEEEECCCSSCCSSCCEEEE-------------------------------EEE--TTEEE-EEEEE-E--
T ss_pred ccCCCCe-EEEEEecccccccccccccEE-------------------------------EeC--CCceE-EeccC-c--
Confidence 9999999 777775543 12222 222 22111 11000 0
Q ss_pred EEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--------CcEEEEECCCceeeeEeecCCcceEE-EEEecCCCEE
Q psy10942 399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--------ATIKLWCLTDYVCLKSLEGHDASVLR-CHFINKGTQI 469 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l 469 (537)
.+..+ +|||++|+.++.+ ..|.+|| +++.......|...+.. +.|+ ++ ++
T Consensus 218 ---------------~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~ 276 (347)
T 2gop_A 218 ---------------SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VY 276 (347)
T ss_dssp ---------------SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EE
T ss_pred ---------------ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EE
Confidence 22333 7888888777643 3688888 55555555556677886 8999 88 88
Q ss_pred EEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE-EeC
Q psy10942 470 VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV-VVY 537 (537)
Q Consensus 470 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i-~vW 537 (537)
++++.++.+++| +.+++.... ..+...+ .++ +|+| .++++++.++.. .||
T Consensus 277 ~~~~~~~~~~l~-~~~g~~~~~-~~~~~~v-----------~~~---~~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 277 FTLFEEGSVNLY-IWDGEIKPI-AKGRHWI-----------MGF---DVDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp EEEEETTEEEEE-EESSSEEEE-ECSSSEE-----------EEE---EESS--SEEEEEECSSSCCEEE
T ss_pred EEEecCCcEEEE-EcCCceEEE-ecCCCeE-----------Eee---eeeC--cEEEEEcCCCChHHhe
Confidence 999999999999 876665443 3446677 778 9999 677777777654 554
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=7.9e-14 Score=126.58 Aligned_cols=242 Identities=13% Similarity=0.163 Sum_probs=159.8
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee------cchhhhhhhhcccCCCccEEEeee
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV------GFSDEILDIALLGEEDSHIVVASN 170 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~ 170 (537)
..+.+++++|+++++++...++.|.+||... +....+. ++...+..+++.++++ .++++..
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g------------~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~ 96 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEG------------RFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTER 96 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTTS------------CEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEEC
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCCC------------cEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcC
Confidence 4689999999999888888889999999775 2333332 2334567888852444 4545443
Q ss_pred ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942 171 EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME 249 (537)
Q Consensus 171 ~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d 249 (537)
... +.| .+||. ...... +. ..+ ...+.++ +++|+|+++++...+
T Consensus 97 ~~~--~~i-----------------~~~d~-------~g~~~~~~~----~~~--~~~~~~i---~~~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 97 SPT--HQI-----------------QIYNQ-------YGQFVRKFG----ATI--LQHPRGV---TVDNKGRIIVVECKV 141 (286)
T ss_dssp GGG--CEE-----------------EEECT-------TSCEEEEEC----TTT--CSCEEEE---EECTTSCEEEEETTT
T ss_pred CCC--CEE-----------------EEECC-------CCcEEEEec----Ccc--CCCceEE---EEeCCCCEEEEECCC
Confidence 211 227 66665 322222 21 023 4567888 899999877777777
Q ss_pred CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942 250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS 329 (537)
Q Consensus 250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 329 (537)
+.|. +|+.... .+..+.. ..+...+.+++++
T Consensus 142 ~~i~--~~~~~g~---------------------------------~~~~~~~--------------~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 142 MRVI--IFDQNGN---------------------------------VLHKFGC--------------SKHLEFPNGVVVN 172 (286)
T ss_dssp TEEE--EECTTSC---------------------------------EEEEEEC--------------TTTCSSEEEEEEC
T ss_pred CEEE--EEcCCCC---------------------------------EEEEeCC--------------CCccCCcEEEEEC
Confidence 7777 7775431 1111111 0223457899999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942 330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409 (537)
Q Consensus 330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 409 (537)
|+++++++...++.|++||.. . +.+..+..+ ++..
T Consensus 173 ~~g~l~v~~~~~~~i~~~~~~-g-~~~~~~~~~------------------------------g~~~------------- 207 (286)
T 1q7f_A 173 DKQEIFISDNRAHCVKVFNYE-G-QYLRQIGGE------------------------------GITN------------- 207 (286)
T ss_dssp SSSEEEEEEGGGTEEEEEETT-C-CEEEEESCT------------------------------TTSC-------------
T ss_pred CCCCEEEEECCCCEEEEEcCC-C-CEEEEEccC------------------------------CccC-------------
Confidence 999987777778899999975 2 222222110 0000
Q ss_pred eEEeeeeEEEEcCCCCEEEEEeCCC-cEEEEECCCceeeeEeecCCc--ceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 410 IITGGVWFVNFSPLDRILISSSGDA-TIKLWCLTDYVCLKSLEGHDA--SVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
.+..++++|+|+++++...++ .|.+||. +++.+..+..+.. .+.+++++|+|+++++ +.|+.|++|++...
T Consensus 208 ----~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 208 ----YPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ----SEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ----CCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 567899999999888887776 9999995 5666777765543 3779999999987776 67999999998653
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=1.8e-14 Score=133.44 Aligned_cols=260 Identities=7% Similarity=0.060 Sum_probs=162.6
Q ss_pred cceEEEEEeccccEEEEEeCC------------------------ceEEEEecccccCcccccccccceeEEee-cchhh
Q psy10942 97 SPLVRIVRSSVKRMYAVVTAD------------------------HNISLYRLNSETGLEERPNKILKFRKQFV-GFSDE 151 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 151 (537)
+.+.+++++|+|+++++...+ +.|.+||..+ ++....+. ++-..
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~ 92 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN-----------AEILQSSGKNLFYL 92 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT-----------CCEEEEECTTTCSS
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC-----------CeEEeccCCCccCC
Confidence 579999999999988887776 4799999987 45554443 33345
Q ss_pred hhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccc-cc--cccccc----ccCCC
Q psy10942 152 ILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSS-QQ--KHNTER----LGRDE 224 (537)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~-~~--l~~~~~----~~h~~ 224 (537)
+..++++ ++++.+++...+.. | ++||. .... .. +..... .++
T Consensus 93 p~gia~d-~~g~l~v~d~~~~~----v-----------------~~~~~-------~g~~~~~~~~~~~~~~g~~~~~-- 141 (329)
T 3fvz_A 93 PHGLSID-TDGNYWVTDVALHQ----V-----------------FKLDP-------HSKEGPLLILGRSMQPGSDQNH-- 141 (329)
T ss_dssp EEEEEEC-TTSCEEEEETTTTE----E-----------------EEECT-------TCSSCCSEEESBTTBCCCSTTC--
T ss_pred ceEEEEC-CCCCEEEEECCCCE----E-----------------EEEeC-------CCCeEEEEEecccCCCCCCccc--
Confidence 7789998 66664444443333 7 77776 4331 11 210000 134
Q ss_pred cCeEEEEeccCccc-CCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 225 LKTVTLLERGKTVK-EEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 225 ~~~v~~~~~~~~s~-~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
......+ +++| ++.++++.+ .++.|+ +|+.... . +..+..
T Consensus 142 ~~~P~~i---a~~~~~g~lyv~d~~~~~~I~--~~~~~g~------------------------~---------~~~~~~ 183 (329)
T 3fvz_A 142 FCQPTDV---AVEPSTGAVFVSDGYCNSRIV--QFSPSGK------------------------F---------VTQWGE 183 (329)
T ss_dssp CSSEEEE---EECTTTCCEEEEECSSCCEEE--EECTTSC------------------------E---------EEEECE
T ss_pred cCCCcEE---EEeCCCCeEEEEeCCCCCeEE--EEcCCCC------------------------E---------EEEecc
Confidence 4568889 9999 788888776 688888 8884431 0 000000
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS 381 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 381 (537)
.... ......+......++++|+ ++++++...++.|++|+.. .++.+..+....
T Consensus 184 ~g~~------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~-~G~~~~~~~~~~------------------ 238 (329)
T 3fvz_A 184 ESSG------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD-TKEFVREIKHAS------------------ 238 (329)
T ss_dssp ECCS------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT-TCCEEEEECCTT------------------
T ss_pred CCCC------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC-CCcEEEEEeccc------------------
Confidence 0000 0000122234689999998 6677777778889999887 445444443221
Q ss_pred CCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee---cCCcceE
Q psy10942 382 IKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE---GHDASVL 458 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~ 458 (537)
+...+..++++| + +.+..+++..++...+..|++||..+++.+..+. ++...+.
T Consensus 239 ------------~~~~~~~~~~~p-g----------~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 239 ------------FGRNVFAISYIP-G----------FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPH 295 (329)
T ss_dssp ------------TTTCEEEEEEET-T----------EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEE
T ss_pred ------------cCCCcceeeecC-C----------EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCee
Confidence 112222333333 1 1111244444444456689999999999888873 5667789
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 459 RCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 459 ~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
.++++|+|.++++...++.|++|++.
T Consensus 296 ~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCC
Confidence 99999999888888889999999974
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=2.7e-13 Score=126.08 Aligned_cols=256 Identities=11% Similarity=0.015 Sum_probs=162.1
Q ss_pred cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc--cccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
...|.++ .|++++..++..+.++.++ .|.-.. ...... ............ ++++++..++.|.+||.
T Consensus 5 ~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~i~~~d~ 73 (333)
T 2dg1_A 5 QQDLPTL---FYSGKSNSAVPIISESELQ--TITAEP----WLEISKKGLQLEGLNFDRQG--QLFLLDVFEGNIFKINP 73 (333)
T ss_dssp -CCCCBC---CSCGGGGCSSCCCCGGGSC--EEECEE----EEEEESSCCCEEEEEECTTS--CEEEEETTTCEEEEECT
T ss_pred cccccee---eecCCccceeEEeecccCc--ccccce----eEEEeccCccccCcEECCCC--CEEEEECCCCEEEEEeC
Confidence 4557788 9999998888888888999 883221 110000 001111111112 46667788899999999
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCCcee------------eEEEEecCCCC
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGGLKL------------LNVLRGHKKGT 366 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~~------------~~~~~~~~~~~ 366 (537)
.+++... ....+...+.+++++|+++++++...+ +.|.+||... ... +..+...+++.
T Consensus 74 ~~~~~~~-----~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 74 ETKEIKR-----PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-DNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp TTCCEEE-----EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-CSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred CCCcEEE-----EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-CEEEEEEccCccCCcccceEECCCCC
Confidence 8776421 112345779999999999988877666 6899999873 222 22333445566
Q ss_pred EEEEEcC------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE-eCCCcEEEE
Q psy10942 367 QIVSTGA------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS-SGDATIKLW 439 (537)
Q Consensus 367 ~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~ 439 (537)
.+++... .+.|..+|..+++....... ...+..++|+|++++|+.+ ..++.|.+|
T Consensus 148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~ 209 (333)
T 2dg1_A 148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------------------ISVANGIALSTDEKVLWVTETTANRLHRI 209 (333)
T ss_dssp EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------------------ESSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred EEEEeccccccCCCceEEEEeCCCCEEEEeecC------------------CCcccceEECCCCCEEEEEeCCCCeEEEE
Confidence 6655543 24455555444332211100 0146778999999866554 457899999
Q ss_pred ECCC-ceeeeE--------eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCcc------ceeccCC
Q psy10942 440 CLTD-YVCLKS--------LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL------KIRNSDS 504 (537)
Q Consensus 440 d~~~-~~~~~~--------~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~------~i~~~~~ 504 (537)
|+.+ +..+.. +.++ ..+..++++++|+++++...++.|.+||. +++.+..+..+.. .+
T Consensus 210 d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~----- 282 (333)
T 2dg1_A 210 ALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS----- 282 (333)
T ss_dssp EECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC-----
T ss_pred EecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCc-----
Confidence 9863 332211 1222 35788999999998888888899999998 5777776654432 35
Q ss_pred CCCCccccccceeeecCCCEEEEEeCC
Q psy10942 505 ENDHKGFGLPRQLCSRNSDCEYRGGWS 531 (537)
Q Consensus 505 ~~~~~~~~~~~~~~s~~~~~l~s~~~d 531 (537)
.++ +|+||++.|+.++.+
T Consensus 283 ------~~~---~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 283 ------THP---QFIPGTNQLIICSND 300 (333)
T ss_dssp ------CEE---EECTTSCEEEEEEEC
T ss_pred ------ceE---EECCCCCEEEEEeCc
Confidence 677 999998887766554
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=1.9e-14 Score=134.83 Aligned_cols=270 Identities=9% Similarity=0.037 Sum_probs=154.8
Q ss_pred cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEeCC---c--eEEEEecccccCcccccccccceeEEeecchh
Q psy10942 76 KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTAD---H--NISLYRLNSETGLEERPNKILKFRKQFVGFSD 150 (537)
Q Consensus 76 ~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (537)
++.|.+||+.+++... + ..+..++|||||++||.++.+ + .|.+||+.+ ++...... +..
T Consensus 42 ~~~l~~~d~~~~~~~~-l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~-----------g~~~~l~~-~~~ 105 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET-----------LSSKKILE-AKN 105 (347)
T ss_dssp EEEEEEEETTTCCEEE-E---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT-----------TEEEEEEE-ESE
T ss_pred cceEEEEeCCCCceEE-c---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC-----------CceEEEEc-CCC
Confidence 6779999998876432 2 568899999999999988754 2 477778776 34333333 334
Q ss_pred hhhhhhcccCCCccEEEeeecccc-----------------------CCcccceeecccCCCcchhhHHHHHHHHHhhhc
Q psy10942 151 EILDIALLGEEDSHIVVASNEYLN-----------------------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFK 207 (537)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~~~~~-----------------------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~ 207 (537)
+..++|+ |+++.|++++.+... ...| .+||+
T Consensus 106 -~~~~~ws-pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l-----------------~~~d~------- 159 (347)
T 2gop_A 106 -IRSLEWN-EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF-----------------WIFDT------- 159 (347)
T ss_dssp -EEEEEEC-TTSSEEEEEEECCCC---------CCCC---------CEEEE-----------------EEEET-------
T ss_pred -ccceeEC-CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceE-----------------EEEEC-------
Confidence 8899999 788888777643100 0113 44454
Q ss_pred ccccc-c-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcc
Q psy10942 208 QSSSQ-Q-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTV 285 (537)
Q Consensus 208 ~~~~~-~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v 285 (537)
.+++. . +. . . .+..+ .|+||| +++++..++. . .+..
T Consensus 160 ~~~~~~~~l~-----~---~-~~~~~---~~spdg-~~~~~~~~~~-~--~~~~-------------------------- 197 (347)
T 2gop_A 160 ESEEVIEEFE-----K---P-RFSSG---IWHRDK-IVVNVPHREI-I--PQYF-------------------------- 197 (347)
T ss_dssp TTTEEEEEEE-----E---E-TTCEE---EEETTE-EEEEEECCCS-S--CCSS--------------------------
T ss_pred CCCeEEeeec-----C---C-Ccccc---cCCCCe-EEEEEecccc-c--cccc--------------------------
Confidence 44443 2 22 1 1 34456 677777 5555443321 0 0000
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCC
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG 365 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 365 (537)
....|.++| +++. .. +..+ ..+..+ +|||+.|+.++.++.- .
T Consensus 198 -------~~~~l~~~d--~~~~-~~-----l~~~-~~~~~~--spdg~~l~~~~~~~~~-------~------------- 239 (347)
T 2gop_A 198 -------KFWDIYIWE--DGKE-EK-----MFEK-VSFYAV--DSDGERILLYGKPEKK-------Y------------- 239 (347)
T ss_dssp -------CCEEEEEEE--TTEE-EE-----EEEE-ESEEEE--EECSSCEEEEECCSSS-------C-------------
T ss_pred -------ccccEEEeC--CCce-EE-----eccC-cceeeE--CCCCCEEEEEEccccC-------C-------------
Confidence 001344444 3221 11 1122 334444 8999988877654310 0
Q ss_pred CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE-EEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942 366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF-VNFSPLDRILISSSGDATIKLWCLTDY 444 (537)
Q Consensus 366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~i~d~~~~ 444 (537)
......|.+|| +++.......+.. .+.. +.|+ |+ ++++++.++.+++| +.++
T Consensus 240 -----~~~~~~l~~~d--~~~~~~l~~~~~~-----------------~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 240 -----MSEHNKLYIYD--GKEVMGILDEVDR-----------------GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp -----CCSSCEEEEEC--SSCEEESSTTCCS-----------------EEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred -----ccccceEEEEC--CCceEeccccCCc-----------------ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 00112333344 2222222222222 4554 7888 88 88899999999999 8766
Q ss_pred eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcE-EEEECCCCeeEEEecCCccce
Q psy10942 445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLL-KLWSIKTSTCVSTFDKHALKI 499 (537)
Q Consensus 445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v-~vwd~~~~~~~~~~~~~~~~i 499 (537)
+.. .+..+...|.+++|+| .++++++.++.. .+|.++ ++ ...+..|...+
T Consensus 293 ~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~~ 343 (347)
T 2gop_A 293 EIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDPI 343 (347)
T ss_dssp SEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTSTT
T ss_pred ceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHhH
Confidence 554 3444577899999999 677777777665 777776 54 45566665543
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=7.7e-13 Score=120.67 Aligned_cols=205 Identities=12% Similarity=0.035 Sum_probs=140.1
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE--------
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV-------- 358 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------- 358 (537)
+++++..++.|..|+..++ . .. +..+...+.+++++|+|+++++...++.|.+||.. .++....
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~-~~-----~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~ 113 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-L-SP-----EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP-GGEWESIADSFEGKK 113 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-E-EE-----EESSCSSEEEEEECTTCCEEEEETTTTEEEEECST-TCCEEEEECEETTEE
T ss_pred EEEEeCCCCEEEEEECCCC-e-EE-----EECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC-CCcEEEEeeccCCCC
Confidence 6778888899999999887 2 11 22355678999999999988877777899999985 2332221
Q ss_pred ------EEecCCCCEEEEE----c-------------CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942 359 ------LRGHKKGTQIVST----G-------------ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415 (537)
Q Consensus 359 ------~~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 415 (537)
+...++|.++++. + ..+.|..++.. ++. ..+..+.. ..
T Consensus 114 ~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~-----------------~~ 174 (296)
T 3e5z_A 114 LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRV-----------------KP 174 (296)
T ss_dssp CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCS-----------------SE
T ss_pred CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCC-----------------CC
Confidence 2233445555542 1 01233333333 221 11111111 45
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEECC-Ccee---eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942 416 WFVNFSPLDRILISSSGDATIKLWCLT-DYVC---LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST 491 (537)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 491 (537)
..++|+|+++.+++.+.++.|.+|++. +++. ...+..+...+..++++++|+++++. ++.|.+|+.+ ++.+..
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE
Confidence 789999999988777778999999986 4444 23333355567889999999877666 7889999985 888888
Q ss_pred ecCCccceeccCCCCCCccccccceee-ecCCCEEEEEeCCCCEEe
Q psy10942 492 FDKHALKIRNSDSENDHKGFGLPRQLC-SRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 492 ~~~~~~~i~~~~~~~~~~~~~~~~~~~-s~~~~~l~s~~~dg~i~v 536 (537)
+..+.. + .++ +| +|+++.|++++.++..++
T Consensus 252 ~~~~~~-~-----------~~~---~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 252 VLTPQT-T-----------SNL---CFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EECSSC-C-----------CEE---EEESTTSCEEEEEETTEEEEE
T ss_pred EECCCC-c-----------eeE---EEECCCCCEEEEEcCCeEEEE
Confidence 877766 7 888 99 589999999888766553
No 183
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.59 E-value=2.2e-13 Score=125.43 Aligned_cols=115 Identities=6% Similarity=-0.017 Sum_probs=89.7
Q ss_pred eeccCCcceEEEecC-----cceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------
Q psy10942 10 VIPQITSEFSVHCGR-----DKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG---------- 74 (537)
Q Consensus 10 ~~~~~~~~~l~s~~~-----~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 74 (537)
..|.|+++.++.... ++.|.+.|..+++.+.+++...... + .++| ++++++++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-v--a~sp--------DG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-P--VVAD--------DGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-E--EECT--------TSSCEEEEEEEEEETTEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-E--EECC--------CCCEEEEEcccccccccCC
Confidence 345589988888865 5789999999999999999655443 5 6788 556666654
Q ss_pred ccceEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEE
Q psy10942 75 EKSLLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQ 144 (537)
Q Consensus 75 ~~~~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 144 (537)
.++.|.+||..+++.+.++... .....++|+|||++|+++.. ++.|.++|..+ .+.+.+
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t-----------~~vv~t 175 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-----------KAFKRM 175 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-----------TEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC-----------CcEEEE
Confidence 3678999999999888776432 24667999999999988864 68899999999 677777
Q ss_pred ee
Q psy10942 145 FV 146 (537)
Q Consensus 145 ~~ 146 (537)
+.
T Consensus 176 I~ 177 (386)
T 3sjl_D 176 LD 177 (386)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=1e-13 Score=126.53 Aligned_cols=259 Identities=8% Similarity=-0.075 Sum_probs=161.4
Q ss_pred cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccC
Q psy10942 97 SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNG 175 (537)
Q Consensus 97 ~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~ 175 (537)
....+++|+|+|+ +++++..++.|..||..+ . ...+..+...+.+++++ +++..+++......
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~-----------~--~~~~~~~~~~~~~l~~~-~dg~l~v~~~~~~~-- 91 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG-----------Q--LSPEMHPSHHQNGHCLN-KQGHLIACSHGLRR-- 91 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS-----------C--EEEEESSCSSEEEEEEC-TTCCEEEEETTTTE--
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCC-----------C--eEEEECCCCCcceeeEC-CCCcEEEEecCCCe--
Confidence 4578999999998 777888889999999987 4 45566666778899998 56665443333334
Q ss_pred CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| .+||. .+++.. +........ ...+..+ +++|+|+++++.+..+...
T Consensus 92 --i-----------------~~~d~-------~~g~~~~~~~~~~~~~--~~~~~~i---~~d~~G~l~vtd~~~g~~~- 139 (296)
T 3e5z_A 92 --L-----------------ERQRE-------PGGEWESIADSFEGKK--LNSPNDV---CLAPDGSLWFSDPTYGIDK- 139 (296)
T ss_dssp --E-----------------EEECS-------TTCCEEEEECEETTEE--CCCCCCE---EECTTSCEEEEECSHHHHC-
T ss_pred --E-----------------EEEcC-------CCCcEEEEeeccCCCC--CCCCCCE---EECCCCCEEEECCcccccc-
Confidence 7 77777 555544 210000011 2345678 8899999888744333322
Q ss_pred ccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCE
Q psy10942 255 ELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKL 334 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 334 (537)
.+....... ....+.|..++.. ++. ..+..+......++|+|+++.
T Consensus 140 -~~~~~~~~~--------------------------~~~~~~l~~~~~~-g~~------~~~~~~~~~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 140 -PEEGYGGEM--------------------------ELPGRWVFRLAPD-GTL------SAPIRDRVKPNGLAFLPSGNL 185 (296)
T ss_dssp -GGGSSCCCC--------------------------CSSSCEEEEECTT-SCE------EEEECCCSSEEEEEECTTSCE
T ss_pred -ccccccccc--------------------------cCCCcEEEEECCC-CCE------EEeecCCCCCccEEECCCCCE
Confidence 211100000 0001344555544 221 112234456789999999999
Q ss_pred EEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEee
Q psy10942 335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414 (537)
Q Consensus 335 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 414 (537)
+++.+.++.|++|++...+...... +++. .+.. .
T Consensus 186 lv~~~~~~~i~~~~~~~~g~~~~~~------------------~~~~-----------~~~~-----------------~ 219 (296)
T 3e5z_A 186 LVSDTGDNATHRYCLNARGETEYQG------------------VHFT-----------VEPG-----------------K 219 (296)
T ss_dssp EEEETTTTEEEEEEECSSSCEEEEE------------------EEEC-----------CSSS-----------------C
T ss_pred EEEeCCCCeEEEEEECCCCcCcCCC------------------eEee-----------CCCC-----------------C
Confidence 8777778899999986222220000 0000 0000 4
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEE-ecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF-INKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
+..++++++|+++++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|++++.++ +.-++..+.++
T Consensus 220 p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 220 TDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp CCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred CCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 4568899999877666 7899999986 778888887777 999999 58999999888764 55556655543
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=1e-12 Score=121.41 Aligned_cols=211 Identities=7% Similarity=-0.000 Sum_probs=148.5
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC--
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK-- 363 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-- 363 (537)
..+++...++.|.++|..+++....+ . .......++++++++.+++...++.|.+||+. ..+....+....
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i-----~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~~~ 127 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRI-----T-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGYIECPDMD 127 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEE-----E-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTTCC
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEc-----C-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCCcc
Confidence 46666677899999999998764433 2 23568899999998544444478999999998 566665555332
Q ss_pred -----------CCCEEEEEc--CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEE
Q psy10942 364 -----------KGTQIVSTG--ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS 430 (537)
Q Consensus 364 -----------~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (537)
++..++++. .++.|.++|..+++.+..+.... ....++++|+|+++++.
T Consensus 128 ~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~------------------~p~~i~~~~dG~l~v~~ 189 (328)
T 3dsm_A 128 MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI------------------QPTSLVMDKYNKMWTIT 189 (328)
T ss_dssp TTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS------------------CBCCCEECTTSEEEEEB
T ss_pred ccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC------------------CccceEEcCCCCEEEEE
Confidence 134444444 48899999999998877664332 34567889999877776
Q ss_pred eCC----------CcEEEEECCCceeeeEeecC-CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE--ecCCcc
Q psy10942 431 SGD----------ATIKLWCLTDYVCLKSLEGH-DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST--FDKHAL 497 (537)
Q Consensus 431 ~~d----------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~--~~~~~~ 497 (537)
..+ +.|.++|..+++....+... ......++|+|++++|+++.. .|.+||..+++.... +..+..
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~ 267 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDT 267 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSS
T ss_pred CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCC
Confidence 654 78999999998887776533 236899999999999988765 899999988875321 111112
Q ss_pred ceeccCCCCCCccccccceeeecCCCEEEEE-----eCCCCEEeC
Q psy10942 498 KIRNSDSENDHKGFGLPRQLCSRNSDCEYRG-----GWSPQVVVY 537 (537)
Q Consensus 498 ~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~-----~~dg~i~vW 537 (537)
.. ..+ +++|++..|+++ ..++.|.+|
T Consensus 268 ~p-----------~gi---~vdp~~g~lyva~~~~y~~~~~V~v~ 298 (328)
T 3dsm_A 268 KY-----------YGL---TVNPNNGEVYVADAIDYQQQGIVYRY 298 (328)
T ss_dssp CE-----------EEE---EECTTTCCEEEEECTTSSSEEEEEEE
T ss_pred ce-----------EEE---EEcCCCCeEEEEcccccccCCEEEEE
Confidence 23 677 999955555444 457777765
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=1.3e-13 Score=141.99 Aligned_cols=251 Identities=8% Similarity=-0.045 Sum_probs=157.3
Q ss_pred chhhhhhhhcccCCCccEEEeeeccc-cCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCc
Q psy10942 148 FSDEILDIALLGEEDSHIVVASNEYL-NGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDEL 225 (537)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~ 225 (537)
|...+..++|| ||+++|+.+..... ....| ++||+ .+++.. .. .. .
T Consensus 123 ~~~~~~~~~~S-PDg~~la~~~~~~G~~~~~i-----------------~v~d~-------~tg~~~~~~-----~~--~ 170 (710)
T 2xdw_A 123 GTVALRGYAFS-EDGEYFAYGLSASGSDWVTI-----------------KFMKV-------DGAKELPDV-----LE--R 170 (710)
T ss_dssp SCEEEEEEEEC-TTSSEEEEEEEETTCSCEEE-----------------EEEET-------TTTEEEEEE-----EE--E
T ss_pred CCEEEEEEEEC-CCCCEEEEEEcCCCCceEEE-----------------EEEEC-------CCCCCCccc-----cc--C
Confidence 33357789999 78888887765431 01148 89998 777665 22 11 2
Q ss_pred CeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942 226 KTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305 (537)
Q Consensus 226 ~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~ 305 (537)
..+..+ +|+|||+.|+.++.++.-. -- .. . ... ......|++|++.++
T Consensus 171 ~~~~~~---~wspDg~~l~~~~~~~~~~--~~--~~-~--~~~----------------------~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 171 VKFSCM---AWTHDGKGMFYNAYPQQDG--KS--DG-T--ETS----------------------TNLHQKLYYHVLGTD 218 (710)
T ss_dssp ECSCCE---EECTTSSEEEEEECCCCSS--CC--SS-S--CCC----------------------CCCCCEEEEEETTSC
T ss_pred cccceE---EEEeCCCEEEEEEECCccc--cc--cc-c--ccc----------------------cCCCCEEEEEECCCC
Confidence 235678 9999999999887665311 00 00 0 000 011346888898876
Q ss_pred ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEccC------CceeeEEEEecCCCCEEEEEcCC
Q psy10942 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-----DKTVKVWSTTG------GLKLLNVLRGHKKGTQIVSTGAD 374 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d~~i~i~d~~~------~~~~~~~~~~~~~~~~l~~~~~d 374 (537)
...... ......|...+..+.|+|||++|+..+. +..|++||+.. +......+..+..
T Consensus 219 ~~~~~~-v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~---------- 287 (710)
T 2xdw_A 219 QSEDIL-CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE---------- 287 (710)
T ss_dssp GGGCEE-EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS----------
T ss_pred cccceE-EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC----------
Confidence 531111 1122334566789999999999988764 45677777762 1111222222111
Q ss_pred CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC----CcEEEEECCCcee--ee
Q psy10942 375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD----ATIKLWCLTDYVC--LK 448 (537)
Q Consensus 375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~--~~ 448 (537)
... ..|+|+|+.|+..+.. +.|.+||+.++.. ..
T Consensus 288 ---------------------------------------~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 327 (710)
T 2xdw_A 288 ---------------------------------------GEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK 327 (710)
T ss_dssp ---------------------------------------SCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred ---------------------------------------cEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce
Confidence 111 1366777777666543 3699999987642 34
Q ss_pred EeecCCc--ceEEEEEecCCCEEEEEeCCCc--EEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942 449 SLEGHDA--SVLRCHFINKGTQIVSTGADGL--LKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC 524 (537)
Q Consensus 449 ~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~--v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 524 (537)
.+..|.. .+..+.|++++.++++...|+. |++|++.+|+.+..+..+...+ ..+ +++|+++.
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v-----------~~~---~~s~d~~~ 393 (710)
T 2xdw_A 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV-----------VGY---SGQKKDTE 393 (710)
T ss_dssp EEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE-----------EEE---ECCTTCSE
T ss_pred eccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE-----------EEE---ecCCCCCE
Confidence 4554544 6888999988888888888874 6667877888778888777677 777 89999986
Q ss_pred EEE
Q psy10942 525 EYR 527 (537)
Q Consensus 525 l~s 527 (537)
|+.
T Consensus 394 l~~ 396 (710)
T 2xdw_A 394 IFY 396 (710)
T ss_dssp EEE
T ss_pred EEE
Confidence 663
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=2.6e-13 Score=139.66 Aligned_cols=253 Identities=10% Similarity=-0.021 Sum_probs=155.9
Q ss_pred ceEEEEEeccccEEEEEeCCc-----eEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942 98 PLVRIVRSSVKRMYAVVTADH-----NISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY 172 (537)
Q Consensus 98 ~v~~~~~s~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 172 (537)
.+..++|||||++||.+..++ .|++||+.+ ++.......+ ..+..++|+ ||++.|++++.+.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t-----------g~~~~~~~~~-~~~~~~~ws-pDg~~l~~~~~~~ 192 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-----------AKELPDVLER-VKFSCMAWT-HDGKGMFYNAYPQ 192 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT-----------TEEEEEEEEE-ECSCCEEEC-TTSSEEEEEECCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCcccccC-cccceEEEE-eCCCEEEEEEECC
Confidence 588999999999999876643 899999998 4444322222 236789999 7888887776543
Q ss_pred cc------------CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc----ccccccccCCCcCeEEEEeccCc
Q psy10942 173 LN------------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ----KHNTERLGRDELKTVTLLERGKT 236 (537)
Q Consensus 173 ~~------------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~----l~~~~~~~h~~~~~v~~~~~~~~ 236 (537)
.. ...| ++|++ .++... .. ...| ...+..+ .|
T Consensus 193 ~~~~~~~~~~~~~~~~~v-----------------~~~~l-------~t~~~~~~~v~~---~~~~--~~~~~~~---~~ 240 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKL-----------------YYHVL-------GTDQSEDILCAE---FPDE--PKWMGGA---EL 240 (710)
T ss_dssp CSSCCSSSCCCCCCCCEE-----------------EEEET-------TSCGGGCEEEEC---CTTC--TTCEEEE---EE
T ss_pred ccccccccccccCCCCEE-----------------EEEEC-------CCCcccceEEec---cCCC--CeEEEEE---EE
Confidence 20 1124 66676 544421 12 1134 5567888 89
Q ss_pred ccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC------Cceeee
Q psy10942 237 VKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG------GLKLLN 310 (537)
Q Consensus 237 s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~------~~~~~~ 310 (537)
+|||++|+..+.++.- .+..|++||+.+ +...
T Consensus 241 SpDg~~l~~~~~~~~~----------------------------------------~~~~l~~~d~~~~~~~~~~~~~-- 278 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCD----------------------------------------PVNRLWYCDLQQESNGITGILK-- 278 (710)
T ss_dssp CTTSCEEEEEEECSSS----------------------------------------SCCEEEEEEGGGSSSSSCSSCC--
T ss_pred cCCCCEEEEEEEccCC----------------------------------------CccEEEEEECcccccccCCccc--
Confidence 9999998866532100 013455555543 2100
Q ss_pred eecccccccCCCeEEEEEcCCCCEEEEEeCCC----cEEEEEccCCce-eeEEEEecCCCCEEEEEcCCCcEEEEECCCC
Q psy10942 311 VLRGHKKGHEKDINCVTVSPNDKLLASGSLDK----TVKVWSTTGGLK-LLNVLRGHKKGTQIVSTGADGLLKLWSIKTS 385 (537)
Q Consensus 311 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i~i~d~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 385 (537)
...+..+...+.. .|+|+|+.|+..+..+ .|.+||+..... ....+..+.+
T Consensus 279 --~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--------------------- 334 (710)
T 2xdw_A 279 --WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE--------------------- 334 (710)
T ss_dssp --CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---------------------
T ss_pred --eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC---------------------
Confidence 1112233333433 4788888877765432 466666652210 1111111110
Q ss_pred eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc--EEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942 386 TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT--IKLWCLTDYVCLKSLEGHDASVLRCHFI 463 (537)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s 463 (537)
.. .+..++|++++.++++...++. |.+|++.+++.+..+..+.+.+..+.++
T Consensus 335 ---------~~-----------------~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s 388 (710)
T 2xdw_A 335 ---------KD-----------------VLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQ 388 (710)
T ss_dssp ---------SC-----------------EEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECC
T ss_pred ---------CC-----------------eEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecC
Confidence 00 4556777777788888888874 5667876787778888787788999999
Q ss_pred cCCCEEEEE-e---CCCcEEEEECCCCe
Q psy10942 464 NKGTQIVST-G---ADGLLKLWSIKTST 487 (537)
Q Consensus 464 ~~~~~l~s~-~---~dg~v~vwd~~~~~ 487 (537)
|+++.++.. + ..+.++.||+.+++
T Consensus 389 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 389 KKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 998766633 2 24789999998877
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=2.7e-12 Score=120.16 Aligned_cols=104 Identities=7% Similarity=-0.078 Sum_probs=79.4
Q ss_pred ccCCcceEEEecC--cc---eEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------cc
Q psy10942 12 PQITSEFSVHCGR--DK---VLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------EK 76 (537)
Q Consensus 12 ~~~~~~~l~s~~~--~g---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 76 (537)
|.+++++++.... .+ .|.++|..+++.+.+++..... .+ .++| ++++++++. .+
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i--~~sp--------Dg~~lyv~n~~~~~~~rg~~~ 96 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NP--VAAH--------SGSEFALASTSFSRIAKGKRT 96 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-Ce--EECC--------CCCEEEEEeccccccccCCCC
Confidence 3478888888764 33 7899999999999998865443 55 6788 667777764 36
Q ss_pred ceEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEeC--CceEEEEeccc
Q psy10942 77 SLLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNS 127 (537)
Q Consensus 77 ~~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~ 127 (537)
+.|.+||..+++.+.++... .....++|+|||++|+++.. ++.|.++| .+
T Consensus 97 ~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred CeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 78999999988777665432 23568999999999998874 47899999 88
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=4.1e-13 Score=124.11 Aligned_cols=287 Identities=6% Similarity=-0.098 Sum_probs=178.2
Q ss_pred CcceEEEEEcCccceeeeecc-------ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCC
Q psy10942 24 RDKVLFTWDLSSRKQLRSYPA-------YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLS 96 (537)
Q Consensus 24 ~~g~v~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~ 96 (537)
.++.|.++|.++++....+.. ......+ .+ . +++++++...++.|.+||..+++.+.++...
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i--~~-~--------~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~ 83 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSM--VI-R--------DGIGWIVVNNSHVIFAIDINTFKEVGRITGF 83 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEE--EE-E--------TTEEEEEEGGGTEEEEEETTTCCEEEEEECC
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEE--EE-E--------CCEEEEEEcCCCEEEEEECcccEEEEEcCCC
Confidence 478999999999988775531 1112223 22 2 4456666667899999999999998888766
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch-----hhhhhhhcccCCCccEEEeeec
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS-----DEILDIALLGEEDSHIVVASNE 171 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~~ 171 (537)
.....++++++++.+++...++.|.+||..+ .+....+.... .....+++. ++.++++...
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-----------~~~~~~i~~g~~~~~~~~p~~i~~~---~~~lyv~~~~ 149 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-----------YEITGYIECPDMDMESGSTEQMVQY---GKYVYVNCWS 149 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTT-----------TEEEEEEECTTCCTTTCBCCCEEEE---TTEEEEEECT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCC-----------CeEEEEEEcCCccccCCCcceEEEE---CCEEEEEcCC
Confidence 7899999999995554444789999999998 56666665433 135566662 5566565431
Q ss_pred cccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCC
Q psy10942 172 YLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSME 249 (537)
Q Consensus 172 ~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d 249 (537)
.+ +.| .++|. .+++.. +. . ......+ +++|+|++++++..+
T Consensus 150 ~~--~~v-----------------~viD~-------~t~~~~~~i~-----~---g~~p~~i---~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 150 YQ--NRI-----------------LKIDT-------ETDKVVDELT-----I---GIQPTSL---VMDKYNKMWTITDGG 192 (328)
T ss_dssp TC--CEE-----------------EEEET-------TTTEEEEEEE-----C---SSCBCCC---EECTTSEEEEEBCCB
T ss_pred CC--CEE-----------------EEEEC-------CCCeEEEEEE-----c---CCCccce---EEcCCCCEEEEECCC
Confidence 11 337 77887 665544 22 1 1223566 778888766655432
Q ss_pred CcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEc
Q psy10942 250 PSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS 329 (537)
Q Consensus 250 ~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 329 (537)
..-. .|. ...+.|.++|..+++....+ . .........++++
T Consensus 193 ~~~~--~~~---------------------------------~~~~~v~~id~~t~~v~~~~-~---~~~g~~p~~la~~ 233 (328)
T 3dsm_A 193 YEGS--PYG---------------------------------YEAPSLYRIDAETFTVEKQF-K---FKLGDWPSEVQLN 233 (328)
T ss_dssp CTTC--SSC---------------------------------BCCCEEEEEETTTTEEEEEE-E---CCTTCCCEEEEEC
T ss_pred ccCC--ccc---------------------------------cCCceEEEEECCCCeEEEEE-e---cCCCCCceeEEEe
Confidence 1111 110 01256778887776543222 0 1112357899999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCc
Q psy10942 330 PNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409 (537)
Q Consensus 330 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 409 (537)
|+++.|+++.. .|.+||.. ..+.... ..+.....
T Consensus 234 ~d~~~lyv~~~--~v~~~d~~-t~~~~~~------------------------------~~~~~~~~------------- 267 (328)
T 3dsm_A 234 GTRDTLYWINN--DIWRMPVE-ADRVPVR------------------------------PFLEFRDT------------- 267 (328)
T ss_dssp TTSCEEEEESS--SEEEEETT-CSSCCSS------------------------------CSBCCCSS-------------
T ss_pred cCCCEEEEEcc--EEEEEECC-CCceeee------------------------------eeecCCCC-------------
Confidence 99999988754 78888876 2221100 00000000
Q ss_pred eEEeeeeEEEEcCC-CCEEEEE----eCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942 410 IITGGVWFVNFSPL-DRILISS----SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI 463 (537)
Q Consensus 410 ~~~~~i~~~~~s~~-~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s 463 (537)
....++++|+ ++++++. ..++.|.+||.. ++.+.++..- .....++|-
T Consensus 268 ----~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~~ 320 (328)
T 3dsm_A 268 ----KYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCWK 320 (328)
T ss_dssp ----CEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEEE
T ss_pred ----ceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec-cCcceEEEe
Confidence 5677899984 5555555 567899999998 8888888642 234556653
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=1.1e-12 Score=121.87 Aligned_cols=276 Identities=11% Similarity=0.027 Sum_probs=163.6
Q ss_pred cEEEEEeCccceEEeeeccceehhhhcC-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe
Q psy10942 67 KTFVLAGGEKSLLHYYETSAVKELYQHG-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF 145 (537)
Q Consensus 67 ~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 145 (537)
...++....++.++.|. ++....+. ....+.+++|+|+|++++++..++.|.+||..+ .+.....
T Consensus 17 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-----------~~~~~~~ 82 (333)
T 2dg1_A 17 SNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-----------KEIKRPF 82 (333)
T ss_dssp GGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-----------CCEEEEE
T ss_pred ccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-----------CcEEEEe
Confidence 34445556677888882 33333333 335679999999999888888889999999987 4444333
Q ss_pred ecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCC
Q psy10942 146 VGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDE 224 (537)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~ 224 (537)
..+...+.+++++ ++++.+++...+....+.| .+||. .+.... +. ....+
T Consensus 83 ~~~~~~~~~i~~~-~dg~l~v~~~~~~~~~~~i-----------------~~~d~-------~~~~~~~~~--~~~~~-- 133 (333)
T 2dg1_A 83 VSHKANPAAIKIH-KDGRLFVCYLGDFKSTGGI-----------------FAATE-------NGDNLQDII--EDLST-- 133 (333)
T ss_dssp ECSSSSEEEEEEC-TTSCEEEEECTTSSSCCEE-----------------EEECT-------TSCSCEEEE--CSSSS--
T ss_pred eCCCCCcceEEEC-CCCcEEEEeCCCCCCCceE-----------------EEEeC-------CCCEEEEEE--ccCcc--
Confidence 3455678999998 5665544433331000126 67776 554433 11 00023
Q ss_pred cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTG 304 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~ 304 (537)
...+..+ +++|+|+++++...+..- . ..+.|..++..+
T Consensus 134 ~~~~~~i---~~d~~g~l~v~~~~~~~~--------~-------------------------------~~~~l~~~~~~~ 171 (333)
T 2dg1_A 134 AYCIDDM---VFDSKGGFYFTDFRGYST--------N-------------------------------PLGGVYYVSPDF 171 (333)
T ss_dssp CCCEEEE---EECTTSCEEEEECCCBTT--------B-------------------------------CCEEEEEECTTS
T ss_pred CCcccce---EECCCCCEEEEecccccc--------C-------------------------------CCceEEEEeCCC
Confidence 4568888 899999877755432100 0 011233333332
Q ss_pred CceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942 305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIK 383 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 383 (537)
++... +..+...+..++|+|+++.|+.+ ..++.|.+|++......+..+...
T Consensus 172 ~~~~~------~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~--------------------- 224 (333)
T 2dg1_A 172 RTVTP------IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT--------------------- 224 (333)
T ss_dssp CCEEE------EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE---------------------
T ss_pred CEEEE------eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce---------------------
Confidence 22110 01112346889999999866554 457889999986222222111100
Q ss_pred CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCc------ce
Q psy10942 384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA------SV 457 (537)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v 457 (537)
....+..+. .+..++++++|+++++...++.|.+||. +++.+..+..+.. .+
T Consensus 225 ---~~~~~~~~~------------------~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~ 282 (333)
T 2dg1_A 225 ---IPYYFTGHE------------------GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS 282 (333)
T ss_dssp ---EEEECCSSS------------------EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC
T ss_pred ---EEEecCCCC------------------CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCc
Confidence 000000000 4566889999998888878899999998 4666666664433 68
Q ss_pred EEEEEecCCCEEEEEeCCC
Q psy10942 458 LRCHFINKGTQIVSTGADG 476 (537)
Q Consensus 458 ~~~~~s~~~~~l~s~~~dg 476 (537)
.+++|+||++.|+.++.++
T Consensus 283 ~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 283 THPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CEEEECTTSCEEEEEEECG
T ss_pred ceEEECCCCCEEEEEeCcc
Confidence 9999999987777665553
No 191
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=4.9e-13 Score=123.20 Aligned_cols=292 Identities=8% Similarity=-0.053 Sum_probs=175.9
Q ss_pred CcEEEEEeCc-----cceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccC
Q psy10942 66 GKTFVLAGGE-----KSLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETG 130 (537)
Q Consensus 66 ~~~~~~~~~~-----~~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~ 130 (537)
++..+++... ++.|.+.|..+++.+.++....... +++||||++|+++. .++.|.+||..+
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t--- 118 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT--- 118 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---
Confidence 4444555433 6799999999999988887544344 99999999988876 357899999999
Q ss_pred cccccccccceeEEeecch-------hhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHH
Q psy10942 131 LEERPNKILKFRKQFVGFS-------DEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILE 203 (537)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~ 203 (537)
.+.+.++.-.. .....++|+ +++++++++..... +.| .++|.
T Consensus 119 --------~~v~~~I~v~~g~r~~~g~~P~~~a~s-pDGk~lyVan~~~~--~~V-----------------sVID~--- 167 (386)
T 3sjl_D 119 --------LLPTADIELPDAPRFLVGTYPWMTSLT-PDGKTLLFYQFSPA--PAV-----------------GVVDL--- 167 (386)
T ss_dssp --------CCEEEEEEETTCCCCCBSCCGGGEEEC-TTSSEEEEEECSSS--CEE-----------------EEEET---
T ss_pred --------CeEEEEEECCCccccccCCCCceEEEc-CCCCEEEEEEcCCC--CeE-----------------EEEEC---
Confidence 67777765321 246788999 78888877653222 237 77788
Q ss_pred hhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeee
Q psy10942 204 AKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYT 281 (537)
Q Consensus 204 ~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~ 281 (537)
.+.+.. +. -. + . .. .+....+.+++.+.||.+. +.++...
T Consensus 168 ----~t~~vv~tI~-----v~---g-~-~~---~~P~g~~~~~~~~~DG~~~--~v~~~~~------------------- 209 (386)
T 3sjl_D 168 ----EGKAFKRMLD-----VP---D-C-YH---IFPTAPDTFFMHCRDGSLA--KVAFGTE------------------- 209 (386)
T ss_dssp ----TTTEEEEEEE-----CC---S-E-EE---EEEEETTEEEEEETTSCEE--EEECCSS-------------------
T ss_pred ----CCCcEEEEEE-----CC---C-c-ce---eecCCCceeEEECCCCCEE--EEECCCC-------------------
Confidence 665554 22 11 1 1 11 2222334555666666665 5554431
Q ss_pred CCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCe-EEEEEc-CCCCEEEEEeCCCcEEEEEccCCc-eeeEE
Q psy10942 282 GGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDI-NCVTVS-PNDKLLASGSLDKTVKVWSTTGGL-KLLNV 358 (537)
Q Consensus 282 ~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s-~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~ 358 (537)
+.+. +..+. .+..-..++ ....|. ++|++++ .+.+|.+++.|+.... +....
T Consensus 210 -------------g~v~--~~~~~---------~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~ 264 (386)
T 3sjl_D 210 -------------GTPE--ITHTE---------VFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPA 264 (386)
T ss_dssp -------------SCCE--EEECC---------CCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCC
T ss_pred -------------CeEE--Eeecc---------eeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecc
Confidence 1110 00000 000000111 112554 6775555 5567889999886221 11111
Q ss_pred EEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC------
Q psy10942 359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG------ 432 (537)
Q Consensus 359 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------ 432 (537)
+..... . ... ..+.|. +...++++|+++.++....
T Consensus 265 ~~~~~~---------------------~---~~~--------~g~~p~-------g~q~~a~~~~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 265 VEALTE---------------------A---ERA--------DGWRPG-------GWQQVAYHRALDRIYLLVDQRDEWR 305 (386)
T ss_dssp EESSCH---------------------H---HHH--------TTEEEC-------SSSCEEEETTTTEEEEEEEECCTTC
T ss_pred eecccc---------------------c---ccc--------ccccCC-------CcceeeECCCCCeEEEEeccccccc
Confidence 110000 0 000 001111 3334667888887777643
Q ss_pred ----CCcEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEecCC
Q psy10942 433 ----DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTFDKH 495 (537)
Q Consensus 433 ----dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~~~~ 495 (537)
.+.|.++|+.+++.+..+..- ..+.++++++|++ +|+++. .++.|.++|..+++.+.++...
T Consensus 306 hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 306 HKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 257999999999999888743 4688999999997 666654 5899999999999999988654
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.53 E-value=8.7e-11 Score=109.95 Aligned_cols=77 Identities=5% Similarity=-0.069 Sum_probs=62.9
Q ss_pred eeEEEEcCCCCEEEEEeC----------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEE
Q psy10942 415 VWFVNFSPLDRILISSSG----------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWS 482 (537)
Q Consensus 415 i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd 482 (537)
...++++|+++.+.++.. ++.|.++|+.+++.+.++.. ......++|+|||+ +++++. .++.|.++|
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 344678999888777653 35799999999999998864 34579999999999 777777 489999999
Q ss_pred CCCCeeEEEe
Q psy10942 483 IKTSTCVSTF 492 (537)
Q Consensus 483 ~~~~~~~~~~ 492 (537)
+.+++.+..+
T Consensus 348 ~~t~~vv~~i 357 (373)
T 2mad_H 348 AGAGDQDQST 357 (373)
T ss_pred CCCCCEEeee
Confidence 9999998874
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=4e-12 Score=113.86 Aligned_cols=212 Identities=13% Similarity=0.079 Sum_probs=149.2
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEE------
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHE-KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV------ 358 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------ 358 (537)
+.+++++.++.|.+||.++++...+. ..+. ..+.++.++|+|++++ +.++.|..||.. ++.+..
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~-----~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~--G~~~W~~~~~~~ 76 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEY-----PLEKGWECNSVAATKAGEILF--SYSKGAKMITRD--GRELWNIAAPAG 76 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEE-----ECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTT--SCEEEEEECCTT
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEe-----CCCccCCCcCeEECCCCCEEE--eCCCCEEEECCC--CCEEEEEcCCCC
Confidence 57899999999999999899875543 2333 4678999999999888 346778877773 223333
Q ss_pred -----EEecCCCCEEEEEcC-CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942 359 -----LRGHKKGTQIVSTGA-DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG 432 (537)
Q Consensus 359 -----~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (537)
....++++.+++.+. ++.+..+|. +++.+..+..... + + +.. .....+++.++|+++++...
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~------~-~~~---~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG-I------E-RPH---AQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS-C------S-SGG---GSCSCCEECTTSCEEEEETT
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC-C------C-ccc---ccccCceECCCCCEEEEecC
Confidence 333456778887776 777777775 5666555532110 0 0 000 03344578899999999999
Q ss_pred CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942 433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG 512 (537)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 512 (537)
++.|..||.. ++.+.++..+ ..+.++...++++++++++.++.|..+|..+|+.+..+..+...-. ....+.+
T Consensus 145 ~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~-----~l~~~~~ 217 (276)
T 3no2_A 145 TSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV-----QLFFVAQ 217 (276)
T ss_dssp TTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC-----CCSEEEE
T ss_pred CCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc-----ccccccc
Confidence 9999999998 9999998865 4566788899999999998888999999999999988864321100 0000145
Q ss_pred ccceeeecCCCEEEEE
Q psy10942 513 LPRQLCSRNSDCEYRG 528 (537)
Q Consensus 513 ~~~~~~s~~~~~l~s~ 528 (537)
+ +..++|+.+++.
T Consensus 218 ~---~~~~~G~i~v~~ 230 (276)
T 3no2_A 218 L---FPLQNGGLYICN 230 (276)
T ss_dssp E---EECTTSCEEEEE
T ss_pred c---eEcCCCCEEEEe
Confidence 5 778888888776
No 194
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=7e-13 Score=124.55 Aligned_cols=115 Identities=8% Similarity=-0.018 Sum_probs=87.4
Q ss_pred eccCCcceEEEecCc-----ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeC----------c
Q psy10942 11 IPQITSEFSVHCGRD-----KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGG----------E 75 (537)
Q Consensus 11 ~~~~~~~~l~s~~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 75 (537)
.|.++++.++..... +.|.+.|..+++.+.+++..... .+ .++| ++++++++. .
T Consensus 79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gi--a~Sp--------Dgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HP--VAAE--------DGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EE--EECT--------TSSCEEEEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ce--EECC--------CCCEEEEEeccccccccCCC
Confidence 345777777766442 78999999999999999965554 55 6788 556666554 4
Q ss_pred cceEEeeeccceehhhhcCCC--------cceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEEe
Q psy10942 76 KSLLHYYETSAVKELYQHGLS--------SPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQF 145 (537)
Q Consensus 76 ~~~i~~wd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 145 (537)
++.|.++|..+++.+.++... .....++|+|||++|+++.. ++.|.+.|..+ .+.+.++
T Consensus 148 ~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t-----------~kvv~~I 216 (426)
T 3c75_H 148 TDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG-----------KTFDRML 216 (426)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT-----------TEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC-----------CeEEEEE
Confidence 678999999999888776532 24567899999999998874 57899999999 6767666
Q ss_pred ec
Q psy10942 146 VG 147 (537)
Q Consensus 146 ~~ 147 (537)
.-
T Consensus 217 ~v 218 (426)
T 3c75_H 217 DV 218 (426)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=8.8e-14 Score=142.71 Aligned_cols=143 Identities=11% Similarity=-0.023 Sum_probs=88.5
Q ss_pred ccCCcceEEEecCc-----ceEEEEEcCccceeeeeccc-----c--ccceeeeEeecCccccccCCcEEEE-----EeC
Q psy10942 12 PQITSEFSVHCGRD-----KVLFTWDLSSRKQLRSYPAY-----E--SLETCAVFHLSDETESKSGGKTFVL-----AGG 74 (537)
Q Consensus 12 ~~~~~~~l~s~~~~-----g~v~iwd~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 74 (537)
|.++|++++-...+ +.|...+...++....+... + .+... .++| ++++|+ .++
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~--~~SP--------DG~~la~~~~~~G~ 144 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTW--AVSW--------DGKKVAFAQKPNAA 144 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEE--EECT--------TSSEEEEEEEETTC
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEE--EECC--------CCCEEEEEECCCCC
Confidence 34678877666432 33444454455433332211 1 23333 6688 556666 334
Q ss_pred ccceEEeeeccceehh-hhcCCCcceEEEEEeccccEEEEEeCCce-------------EEEEecccccCcccccccccc
Q psy10942 75 EKSLLHYYETSAVKEL-YQHGLSSPLVRIVRSSVKRMYAVVTADHN-------------ISLYRLNSETGLEERPNKILK 140 (537)
Q Consensus 75 ~~~~i~~wd~~~~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~d~~-------------i~iwd~~~~~~~~~~~~~~~~ 140 (537)
.+..|++||+.+++.+ ...........++|+|||+.|+.++.|.. |++|++.++... ..
T Consensus 145 ~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-------~~ 217 (695)
T 2bkl_A 145 DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-------DT 217 (695)
T ss_dssp SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-------CE
T ss_pred ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-------ce
Confidence 4568999999999875 21111112278999999999999988765 999999874110 12
Q ss_pred eeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942 141 FRKQFVGFSDEILDIALLGEEDSHIVVASNEY 172 (537)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 172 (537)
++.....|...+..+.|+ +++++|++.+.+.
T Consensus 218 lv~~~~~~~~~~~~~~~S-pDG~~l~~~~~~~ 248 (695)
T 2bkl_A 218 VVHERTGDPTTFLQSDLS-RDGKYLFVYILRG 248 (695)
T ss_dssp EEECCCCCTTCEEEEEEC-TTSCCEEEEEEET
T ss_pred EEEecCCCCEEEEEEEEC-CCCCEEEEEEeCC
Confidence 333444455667889999 7888888777655
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.49 E-value=4.7e-12 Score=113.71 Aligned_cols=214 Identities=7% Similarity=-0.084 Sum_probs=141.4
Q ss_pred EEE-EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---------eee
Q psy10942 287 LLA-SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL---------KLL 356 (537)
Q Consensus 287 ~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---------~~~ 356 (537)
+++ +...++.|.+|+..+..... ....+...+.+++++++++++++.. ++.|.+||..... ...
T Consensus 37 l~v~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p 110 (270)
T 1rwi_B 37 VYVTSEGMYGRVVKLATGSTGTTV-----LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYP 110 (270)
T ss_dssp EEEEECSSSCEEEEECC-----EE-----CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSE
T ss_pred EEEEccCCCCcEEEecCCCcccce-----EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCC
Confidence 444 44667889999876654211 1122334678899999998666655 8899999976321 123
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcE
Q psy10942 357 NVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436 (537)
Q Consensus 357 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 436 (537)
..+...+++..+++...++.|.+|+..+............ .+..++++|+++++++...++.|
T Consensus 111 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------~p~~i~~~~~g~l~v~~~~~~~i 173 (270)
T 1rwi_B 111 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN-----------------DPDGVAVDNSGNVYVTDTDNNRV 173 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC-----------------SCCCEEECTTCCEEEEEGGGTEE
T ss_pred cceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCC-----------------CceeEEEeCCCCEEEEECCCCEE
Confidence 3444455677777777778888887654433221111111 46778999999977777778899
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccce
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ 516 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 516 (537)
.+||............+...+..++++++|.++++...++.|.+|+............+...+ .++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p-----------~~i--- 239 (270)
T 1rwi_B 174 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTP-----------LAV--- 239 (270)
T ss_dssp EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCE-----------EEE---
T ss_pred EEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCc-----------eeE---
Confidence 999988765544333344668999999999877777778899999986554332222222334 777
Q ss_pred eeecCCCEEEEEeCCCCEEeC
Q psy10942 517 LCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 517 ~~s~~~~~l~s~~~dg~i~vW 537 (537)
+++++|+++++...++.|+++
T Consensus 240 ~~~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 240 AVDSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEE
T ss_pred EECCCCCEEEEECCCCEEEEE
Confidence 999999988888889998874
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=2.4e-10 Score=104.21 Aligned_cols=262 Identities=6% Similarity=-0.077 Sum_probs=166.6
Q ss_pred cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc--ccccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF--VPEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
...+.++ ++.++|+.+++...++.+. .|+.. +........ ......+...... ..+++...++.|..|+.
T Consensus 14 ~~~~~~i---~~d~~g~l~v~~~~~~~v~--~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 14 DTGPYGI---TVSDKGKVWITQHKANMIS--CINLD-GKITEYPLPTPDAKVMCLTISSDG--EVWFTENAANKIGRITK 85 (299)
T ss_dssp SCCEEEE---EECTTSCEEEEETTTTEEE--EECTT-CCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT
T ss_pred CCCccce---EECCCCCEEEEecCCCcEE--EEcCC-CCeEEecCCcccCceeeEEECCCC--CEEEeCCCCCeEEEECC
Confidence 5778999 9999999888777678888 89877 321111100 0001111111111 35555556788999998
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce----------eeEEEEecCCCCEEEEEc
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK----------LLNVLRGHKKGTQIVSTG 372 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~----------~~~~~~~~~~~~~l~~~~ 372 (537)
..... .. ........+.+++++|+++++++...++.|..||.. ... ....+...+++..+++..
T Consensus 86 ~g~~~--~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 86 KGIIK--EY---TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TSCEE--EE---ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CCcEE--EE---eCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 63321 11 112244578999999999888877778889999874 221 123334445566777666
Q ss_pred CCCcEEEEECCCCeeeee-eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-e
Q psy10942 373 ADGLLKLWSIKTSTCVST-FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-L 450 (537)
Q Consensus 373 ~d~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~ 450 (537)
.++.|..||. +++.... ...... .+..++++++++++++...++.|..||. +++.... +
T Consensus 160 ~~~~i~~~~~-~g~~~~~~~~~~~~-----------------~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 160 QNNAIGRITE-SGDITEFKIPTPAS-----------------GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKI 220 (299)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTC-----------------CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred CCCEEEEEcC-CCcEEEeeCCCCCC-----------------cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEEC
Confidence 6788888887 5543321 111111 5678899999997777666789999998 6554322 2
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 451 ~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
..+...+.+++++++|+++++...++.|..||. +++.... +..+...+ .++ ++ ++++++++..
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~-----------~~i---~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEP-----------HGI---CF-DGETIWFAME 284 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCE-----------EEE---EE-CSSCEEEEET
T ss_pred CCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCcc-----------ceE---Ee-cCCCEEEEec
Confidence 334567899999999987777667889999998 5553322 22333445 777 88 8888877765
Q ss_pred CCCCEE
Q psy10942 530 WSPQVV 535 (537)
Q Consensus 530 ~dg~i~ 535 (537)
.++.++
T Consensus 285 ~~~l~~ 290 (299)
T 2z2n_A 285 CDKIGK 290 (299)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 444443
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.48 E-value=8.8e-13 Score=135.30 Aligned_cols=279 Identities=13% Similarity=0.011 Sum_probs=164.4
Q ss_pred eccccEEEEEeCCc---eEEEEecccccCcccccccccceeEEe------ecchhhhhhhhcccCCCccEEEeeecc-cc
Q psy10942 105 SSVKRMYAVVTADH---NISLYRLNSETGLEERPNKILKFRKQF------VGFSDEILDIALLGEEDSHIVVASNEY-LN 174 (537)
Q Consensus 105 s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~ 174 (537)
+|+|++++....++ .-.+|...... .+....+ .+|...+..++|| ||+++|+.+.... ..
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~l~d~~~~a~~~~~~~~~~~~S-PDG~~la~~~~~~G~~ 145 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGES---------GQEKVLLDPNGWSKDGTVSLGTWAVS-WDGKKVAFAQKPNAAD 145 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTT---------SCCEEEECGGGSSSSSCEEEEEEEEC-TTSSEEEEEEEETTCS
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCC---------CCcEEEEchHHhccCCCEEEEEEEEC-CCCCEEEEEECCCCCc
Confidence 58999988877644 34556554310 2222122 1344468889999 7888887655432 11
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccccccCCCcCeE--EEEeccCcccCCCeeeeccCCCcc
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTERLGRDELKTV--TLLERGKTVKEEDLFPRQSMEPST 252 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~~~~h~~~~~v--~~~~~~~~s~~~~~l~~~~~d~~i 252 (537)
...| ++||+ .+++.... .+ ...+ ..+ +|+|||+.|+.++.|..-
T Consensus 146 ~~~i-----------------~v~dl-------~tg~~~~~-----~~--~~~~~~~~~---~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 146 EAVL-----------------HVIDV-------DSGEWSKV-----DV--IEGGKYATP---KWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp CCEE-----------------EEEET-------TTCCBCSS-----CC--BSCCTTCCC---EECTTSSEEEEEECCCCT
T ss_pred eEEE-----------------EEEEC-------CCCCCcCC-----cc--cCcccccce---EEecCCCEEEEEEecCCC
Confidence 2348 89998 77665412 22 2222 577 899999999988776431
Q ss_pred eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942 253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND 332 (537)
Q Consensus 253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 332 (537)
. --.... .....|++|++.++.....+ ......+...+..+.|+|||
T Consensus 192 ~--~~~~~~------------------------------~~~~~v~~~~l~t~~~~~~l-v~~~~~~~~~~~~~~~SpDG 238 (695)
T 2bkl_A 192 S--IKVDER------------------------------PGYTTIRYHTLGTEPSKDTV-VHERTGDPTTFLQSDLSRDG 238 (695)
T ss_dssp T--SCGGGG------------------------------GGGCEEEEEETTSCGGGCEE-EECCCCCTTCEEEEEECTTS
T ss_pred C--CccccC------------------------------CCCCEEEEEECCCCchhceE-EEecCCCCEEEEEEEECCCC
Confidence 1 000000 01246888888776531111 22233455678899999999
Q ss_pred CEEEEEeCCC----cEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCC
Q psy10942 333 KLLASGSLDK----TVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN 408 (537)
Q Consensus 333 ~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 408 (537)
++|+..+.++ .|++++.. .. ....+..+..
T Consensus 239 ~~l~~~~~~~~~~~~l~~~~~~-~~-~~~~l~~~~~-------------------------------------------- 272 (695)
T 2bkl_A 239 KYLFVYILRGWSENDVYWKRPG-EK-DFRLLVKGVG-------------------------------------------- 272 (695)
T ss_dssp CCEEEEEEETTTEEEEEEECTT-CS-SCEEEEECSS--------------------------------------------
T ss_pred CEEEEEEeCCCCceEEEEEcCC-CC-ceEEeecCCC--------------------------------------------
Confidence 9998877655 45555433 11 1222222211
Q ss_pred ceEEeeeeEEEEcCCCCEEEEEe---CCCcEEEEECCCcee--eeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942 409 QIITGGVWFVNFSPLDRILISSS---GDATIKLWCLTDYVC--LKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLW 481 (537)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vw 481 (537)
......+ ++|++++... .++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++...|+..++|
T Consensus 273 -----~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 273 -----AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp -----CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred -----ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 1222233 4455333333 257899999987653 2333333 4457888998 67788888899988887
Q ss_pred ECC-CCeeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942 482 SIK-TSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR 527 (537)
Q Consensus 482 d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s 527 (537)
.+. +++....+..+ ...+ ..+ +++|+++.|+.
T Consensus 346 ~~~~~g~~~~~l~~~~~~~v-----------~~~---~~s~d~~~l~~ 379 (695)
T 2bkl_A 346 VATLKGKPVRTVQLPGVGAA-----------SNL---MGLEDLDDAYY 379 (695)
T ss_dssp EEETTCCEEEECCCSSSSEE-----------CCC---BSCTTCSEEEE
T ss_pred EEeCCCCeeEEecCCCCeEE-----------EEe---ecCCCCCEEEE
Confidence 654 46666666655 5566 777 89999987763
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=5.8e-12 Score=130.13 Aligned_cols=253 Identities=13% Similarity=-0.049 Sum_probs=146.3
Q ss_pred ceEEEEEeccccEEEEEeCC-----ceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942 98 PLVRIVRSSVKRMYAVVTAD-----HNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY 172 (537)
Q Consensus 98 ~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 172 (537)
.+..++|||||++||.+..+ ..|++||+.+ ++.+.. ..+...+..++|+ ++ +.|+++..+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t-----------g~~~~~-~~~~~~~~~~~ws-pD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD-----------GKPLAD-ELKWVKFSGLAWL-GN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT-----------CCEEEE-EEEEEESCCCEES-TT-SEEEEEECCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCCc-cCCCceeccEEEE-CC-CEEEEEEecC
Confidence 68899999999999987754 4699999998 444332 2222234689999 66 7777766543
Q ss_pred cc----------CCcccceeecccCCCcchhhHHHHHHHHHhhhcccccc---c-ccccccccCCCcCeEEEEeccCccc
Q psy10942 173 LN----------GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQ---Q-KHNTERLGRDELKTVTLLERGKTVK 238 (537)
Q Consensus 173 ~~----------~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~---~-l~~~~~~~h~~~~~v~~~~~~~~s~ 238 (537)
.. ...| ++|++ .+... . +. ...+ ...+..+ .|+|
T Consensus 230 ~~~~~~~~~~~~~~~v-----------------~~~~l-------gt~~~~~~lv~~---~~~~--~~~~~~~---~~Sp 277 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTV-----------------WLHRL-------GTPQSADQPVFA---TPEL--PKRGHGA---SVSS 277 (741)
T ss_dssp C--------CCCCCEE-----------------EEEET-------TSCGGGCEEEEC---CTTC--TTCEEEE---EECT
T ss_pred cccccccccCCCCCEE-----------------EEEEC-------CCCchhCEEEec---cCCC--CeEEEEE---EECC
Confidence 20 1124 55565 44332 1 22 0123 3457888 8999
Q ss_pred CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCcee-eeeeccccc
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKL-LNVLRGHKK 317 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~ 317 (537)
||++|+..+.++. + ....|++||+.++... .. .+.
T Consensus 278 DG~~l~~~~~~~~------~----------------------------------~~~~l~~~d~~~~~~~~~~----~l~ 313 (741)
T 1yr2_A 278 DGRWVVITSSEGT------D----------------------------------PVNTVHVARVTNGKIGPVT----ALI 313 (741)
T ss_dssp TSCEEEEEEECTT------C----------------------------------SCCEEEEEEEETTEECCCE----EEE
T ss_pred CCCEEEEEEEccC------C----------------------------------CcceEEEEECCCCCCcccE----Eec
Confidence 9998886654320 0 0124555665544110 00 111
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCC-ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942 318 GHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGG-LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD 392 (537)
Q Consensus 318 ~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 392 (537)
.+...+... ++|+|+.|+..+.+ +.|.+||+... ......+ .+
T Consensus 314 ~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~------------------------------ 361 (741)
T 1yr2_A 314 PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PE------------------------------ 361 (741)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CC------------------------------
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cC------------------------------
Confidence 222233333 34888888877654 34777776521 1111111 11
Q ss_pred cCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-CceeeeEeec-CCcceEEEEEecCCCEEE
Q psy10942 393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-DYVCLKSLEG-HDASVLRCHFINKGTQIV 470 (537)
Q Consensus 393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~ 470 (537)
+.. .+..++++ ++.++++...|+..++|.+. +++....+.. +.+.+..+.++|+++.|+
T Consensus 362 -~~~-----------------~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 362 -SKD-----------------NLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp -CSS-----------------EEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred -CCC-----------------eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence 111 23344555 45677888888887777544 3555566654 356788999999987665
Q ss_pred EE-e---CCCcEEEEECCCCeeEEEe
Q psy10942 471 ST-G---ADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 471 s~-~---~dg~v~vwd~~~~~~~~~~ 492 (537)
.. + ..++|++||+.+++. ..+
T Consensus 423 ~~~ss~~~P~~i~~~d~~tg~~-~~l 447 (741)
T 1yr2_A 423 LSFSSFTQPATVLALDPATAKT-TPW 447 (741)
T ss_dssp EEEEETTEEEEEEEEETTTTEE-EEC
T ss_pred EEEcCCCCCCEEEEEECCCCcE-EEE
Confidence 33 2 247899999988873 344
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.43 E-value=6.1e-12 Score=118.21 Aligned_cols=278 Identities=8% Similarity=-0.049 Sum_probs=171.3
Q ss_pred ceEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccCcccccccccceeEEee
Q psy10942 77 SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETGLEERPNKILKFRKQFV 146 (537)
Q Consensus 77 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 146 (537)
+.|.++|+.+++.+.++.....- .+++||||++|+++. .++.|.++|..+ .+.+.++.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t-----------~~vv~~I~ 166 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT-----------FLPIADIE 166 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-----------CCEEEEEE
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-----------CcEEEEEE
Confidence 79999999999999888855444 899999999988876 367899999999 67777665
Q ss_pred cc-------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccc
Q psy10942 147 GF-------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNT 217 (537)
Q Consensus 147 ~~-------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~ 217 (537)
-. ......++|+ +++++++++..... +.| .+.|. .+.+.. +.
T Consensus 167 v~g~~r~~~g~~P~~~~~s-pDGk~lyV~n~~~~--~~V-----------------sVID~-------~t~kvv~~I~-- 217 (426)
T 3c75_H 167 LPDAPRFLVGTYQWMNALT-PDNKNLLFYQFSPA--PAV-----------------GVVDL-------EGKTFDRMLD-- 217 (426)
T ss_dssp ETTCCCCCBSCCGGGSEEC-TTSSEEEEEECSSS--CEE-----------------EEEET-------TTTEEEEEEE--
T ss_pred CCCccccccCCCcceEEEc-CCCCEEEEEecCCC--CeE-----------------EEEEC-------CCCeEEEEEE--
Confidence 32 2346788999 78888877653222 226 66677 555443 22
Q ss_pred ccccCCCcCeEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCe
Q psy10942 218 ERLGRDELKTVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKT 296 (537)
Q Consensus 218 ~~~~h~~~~~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~ 296 (537)
-. +. . ...|++ +.+++.+.||.+. +.+...+.. .... +
T Consensus 218 ---v~---g~---~---~~~p~g~~~~v~~~~dG~~~--~V~~~~~~v-----------------------~~~~----~ 256 (426)
T 3c75_H 218 ---VP---DC---Y---HIFPASPTVFYMNCRDGSLA--RVDFADGET-----------------------KVTN----T 256 (426)
T ss_dssp ---CC---SE---E---EEEEEETTEEEEEETTSSEE--EEECCTTCC-----------------------EEEE----C
T ss_pred ---cC---Cc---e---eeccCCCcEEEEEcCCCCEE--EEECCCCcE-----------------------EEEe----e
Confidence 10 10 1 122332 3344444455544 334321100 0000 0
Q ss_pred EEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-eEEEEecCCCCEEEEEcCCC
Q psy10942 297 VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-LNVLRGHKKGTQIVSTGADG 375 (537)
Q Consensus 297 i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~l~~~~~d~ 375 (537)
.+++..... ....+.+.++++.++.....+.+.+.|+...... +..+
T Consensus 257 -~~~~v~~~p---------------~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~---------------- 304 (426)
T 3c75_H 257 -EVFHTEDEL---------------LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPI---------------- 304 (426)
T ss_dssp -CCCSCTTSC---------------BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCE----------------
T ss_pred -eeeccCCCc---------------eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeee----------------
Confidence 111111110 0113567888888877778888988888622111 0000
Q ss_pred cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC----------CCcEEEEECCCce
Q psy10942 376 LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG----------DATIKLWCLTDYV 445 (537)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~ 445 (537)
.+.....+. ..+.|. +...++++|+++.+++... ++.|.++|+.+.+
T Consensus 305 -----~~~~~~~i~-----------~g~~p~-------g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 305 -----EALTEAERA-----------DDWRPG-------GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE 361 (426)
T ss_dssp -----ESSCTTTGG-----------GTEEEC-------SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred -----eeccccccc-----------cccccC-------CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
Confidence 100000000 000111 2233678888877776642 3579999999999
Q ss_pred eeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEe
Q psy10942 446 CLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 446 ~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~ 492 (537)
.+.++... .....+.|+||++ +++++. .++.|.++|+.+++.++++
T Consensus 362 vv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 362 RINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99988743 3478999999999 888888 5899999999999999887
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.43 E-value=2.2e-12 Score=115.95 Aligned_cols=240 Identities=8% Similarity=-0.044 Sum_probs=151.1
Q ss_pred ceEEEEEeccccEEE-EEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 98 PLVRIVRSSVKRMYA-VVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 98 ~v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
...+++++++|++++ +.+.++.|.+||..+ .........+...+.++++. +++. ++++..++.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~p~~i~~~-~~g~-l~v~~~~~~--- 88 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGS-----------TGTTVLPFNGLYQPQGLAVD-GAGT-VYVTDFNNR--- 88 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC----------------EECCCCSCCSCCCEEEC-TTCC-EEEEETTTE---
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCC-----------cccceEeeCCcCCcceeEEC-CCCC-EEEEcCCCE---
Confidence 788999999998766 446778899999766 22211112233457889998 5555 555543333
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE 255 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~ 255 (537)
| .+||. ...... +. ... ...+..+ +++++|+.+++...++.|.
T Consensus 89 -i-----------------~~~d~-------~~~~~~~~~----~~~--~~~p~~i---~~~~~g~l~v~~~~~~~i~-- 132 (270)
T 1rwi_B 89 -V-----------------VTLAA-------GSNNQTVLP----FDG--LNYPEGL---AVDTQGAVYVADRGNNRVV-- 132 (270)
T ss_dssp -E-----------------EEECT-------TCSCCEECC----CCS--CSSEEEE---EECTTCCEEEEEGGGTEEE--
T ss_pred -E-----------------EEEeC-------CCceEeeee----cCC--cCCCcce---EECCCCCEEEEECCCCEEE--
Confidence 7 66776 443333 22 022 3567888 8888888777666566666
Q ss_pred cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942 256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL 335 (537)
Q Consensus 256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 335 (537)
+|+.... .... ........+.+++++|+|+++
T Consensus 133 ~~~~~~~-------------------------------------------~~~~-----~~~~~~~~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 133 KLAAGSK-------------------------------------------TQTV-----LPFTGLNDPDGVAVDNSGNVY 164 (270)
T ss_dssp EECTTCC-------------------------------------------SCEE-----CCCCSCCSCCCEEECTTCCEE
T ss_pred EEECCCc-------------------------------------------eeEe-----eccccCCCceeEEEeCCCCEE
Confidence 6643221 0000 000112345778999999877
Q ss_pred EEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415 (537)
Q Consensus 336 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 415 (537)
++...++.|.+||.. ....... ...... .+
T Consensus 165 v~~~~~~~i~~~~~~-~~~~~~~--------------------------------~~~~~~-----------------~p 194 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAE-SNNQVVL--------------------------------PFTDIT-----------------AP 194 (270)
T ss_dssp EEEGGGTEEEEECTT-TCCEEEC--------------------------------CCSSCC-----------------SE
T ss_pred EEECCCCEEEEEecC-CCceEee--------------------------------cccCCC-----------------Cc
Confidence 776667888888876 2211100 000000 56
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
..++++++|.++++...++.|.+|+............+...+.+++++++|+++++...++.|+++++...+
T Consensus 195 ~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 195 WGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 788999999877777778899999987654333222334568999999999988888889999999986554
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.43 E-value=5.6e-12 Score=130.26 Aligned_cols=283 Identities=11% Similarity=-0.052 Sum_probs=162.7
Q ss_pred eccccEEEEEeCCce---EEEEecccccCcccccccccceeEE------eecchhhhhhhhcccCCCccEEEeeeccc-c
Q psy10942 105 SSVKRMYAVVTADHN---ISLYRLNSETGLEERPNKILKFRKQ------FVGFSDEILDIALLGEEDSHIVVASNEYL-N 174 (537)
Q Consensus 105 s~~~~~la~~~~d~~---i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~~~~~~~~-~ 174 (537)
+|||++++....++. -.+|....... . ..+.... -.+|...+..++|| ||+++|+.+..... .
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~----~--~~~~~~lld~~~l~~~~~~~~~~~~~S-PDG~~la~~~~~~G~e 187 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAP----V--GTKGRVLLDPNTWAKDGATALDAWAAS-DDGRLLAYSVQDGGSD 187 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSC----T--TCCCEEEECGGGCC----EEEEEEEEC-TTSSEEEEEEEETTCS
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCcc----C--CCCCEEEECHHHhccCCCEEEEeEEEC-CCCCEEEEEEcCCCCc
Confidence 599999887765443 56666543100 0 0111111 12233357789999 78888887765421 1
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL 253 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~ 253 (537)
...| ++||+ .+++.. .. .+ ...+..+ +|+|| +.|+.++.++...
T Consensus 188 ~~~i-----------------~v~dl-------~tg~~~~~~-----~~--~~~~~~~---~wspD-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 188 WRTV-----------------KFVGV-------ADGKPLADE-----LK--WVKFSGL---AWLGN-DALLYSRFAEPKE 232 (741)
T ss_dssp EEEE-----------------EEEET-------TTCCEEEEE-----EE--EEESCCC---EESTT-SEEEEEECCCC--
T ss_pred eEEE-----------------EEEEC-------CCCCCCCcc-----CC--CceeccE---EEECC-CEEEEEEecCccc
Confidence 1237 88998 777654 22 12 2223567 89999 9998877665321
Q ss_pred eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942 254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK 333 (537)
Q Consensus 254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 333 (537)
- .. +........|++|++.++...... ......+...+..+.|+|||+
T Consensus 233 --~---~~--------------------------~~~~~~~~~v~~~~lgt~~~~~~l-v~~~~~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 233 --G---QA--------------------------FQALNYNQTVWLHRLGTPQSADQP-VFATPELPKRGHGASVSSDGR 280 (741)
T ss_dssp -------------------------------------CCCCCEEEEEETTSCGGGCEE-EECCTTCTTCEEEEEECTTSC
T ss_pred --c---cc--------------------------cccCCCCCEEEEEECCCCchhCEE-EeccCCCCeEEEEEEECCCCC
Confidence 0 00 000011346788888766521111 112223334588999999999
Q ss_pred EEEEEeCCC-----cEEEEEccCCcee-eEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942 334 LLASGSLDK-----TVKVWSTTGGLKL-LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407 (537)
Q Consensus 334 ~l~~~~~d~-----~i~i~d~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 407 (537)
+|+..+.++ .|++||+..+... ...+..+.+
T Consensus 281 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~------------------------------------------- 317 (741)
T 1yr2_A 281 WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK------------------------------------------- 317 (741)
T ss_dssp EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-------------------------------------------
T ss_pred EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-------------------------------------------
Confidence 988877543 6777777622111 222222111
Q ss_pred CceEEeeeeEEEEcCCCCEEEEEeC----CCcEEEEECCCc--eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy10942 408 NQIITGGVWFVNFSPLDRILISSSG----DATIKLWCLTDY--VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481 (537)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vw 481 (537)
..... ++|+|+.|+..+. ++.|.+||+.++ +....+..+...+..+.|+ ++.++++...|+..+||
T Consensus 318 ------~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 318 ------AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp ------SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEE
T ss_pred ------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 11112 2367777777665 345999999874 3444444455556778887 55678888889887777
Q ss_pred ECC-CCeeEEEecCC-ccceeccCCCCCCccccccceeeecCCCEEE
Q psy10942 482 SIK-TSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNSDCEY 526 (537)
Q Consensus 482 d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~ 526 (537)
.+. +++....+..+ ...+ ..+ +++|+++.|+
T Consensus 390 ~~~~~g~~~~~l~~~~~~~v-----------~~~---~~s~d~~~l~ 422 (741)
T 1yr2_A 390 AFDLDGKPAGAVSLPGIGSA-----------SGL---SGRPGDRHAY 422 (741)
T ss_dssp EEETTSCEEEECBCSSSCEE-----------EEE---ECCBTCSCEE
T ss_pred EEeCCCCceeeccCCCCeEE-----------EEe---ecCCCCCEEE
Confidence 554 46666666543 4556 667 8999988666
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.42 E-value=1.2e-10 Score=106.21 Aligned_cols=279 Identities=6% Similarity=-0.035 Sum_probs=164.7
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
..+.+++++++|+++++...++.|..||... ......+..+...+.++++. +++...++....+.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~--- 79 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLDG-----------KITEYPLPTPDAKVMCLTIS-SDGEVWFTENAANK--- 79 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-----------CEEEEECSSTTCCEEEEEEC-TTSCEEEEETTTTE---
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCCC-----------CeEEecCCcccCceeeEEEC-CCCCEEEeCCCCCe---
Confidence 5799999999998777666578899999773 21111222234557888888 55554433222333
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE 255 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~ 255 (537)
| ..||. . ++.. +. .... ...+..+ ++.++|+++++...++.+.
T Consensus 80 -i-----------------~~~~~-------~-g~~~~~~---~~~~--~~~~~~i---~~~~~g~l~v~~~~~~~i~-- 123 (299)
T 2z2n_A 80 -I-----------------GRITK-------K-GIIKEYT---LPNP--DSAPYGI---TEGPNGDIWFTEMNGNRIG-- 123 (299)
T ss_dssp -E-----------------EEECT-------T-SCEEEEE---CSST--TCCEEEE---EECTTSCEEEEETTTTEEE--
T ss_pred -E-----------------EEECC-------C-CcEEEEe---CCCc--CCCceee---EECCCCCEEEEecCCceEE--
Confidence 6 55665 3 2211 11 0134 5578889 8999998888877778888
Q ss_pred cccccCCCccccccc--ccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942 256 LEKRKTYHFPLFGIF--VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK 333 (537)
Q Consensus 256 iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 333 (537)
.|+. .+........ ......+...... ..+++...++.|..||. +++... . ........+.+++++++++
T Consensus 124 ~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~-~---~~~~~~~~~~~i~~~~~g~ 195 (299)
T 2z2n_A 124 RITD-DGKIREYELPNKGSYPSFITLGSDN--ALWFTENQNNAIGRITE-SGDITE-F---KIPTPASGPVGITKGNDDA 195 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT-TCCEEE-E---ECSSTTCCEEEEEECTTSS
T ss_pred EECC-CCCEEEecCCCCCCCCceEEEcCCC--CEEEEeCCCCEEEEEcC-CCcEEE-e---eCCCCCCcceeEEECCCCC
Confidence 8887 3221111000 0001111111111 35555556788999988 444321 1 1223345678899999988
Q ss_pred EEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942 334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413 (537)
Q Consensus 334 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 413 (537)
++++...++.|.+||.. .. . ..+... ....
T Consensus 196 l~v~~~~~~~i~~~~~~-g~-~-~~~~~~------------------------------~~~~----------------- 225 (299)
T 2z2n_A 196 LWFVEIIGNKIGRITTS-GE-I-TEFKIP------------------------------TPNA----------------- 225 (299)
T ss_dssp EEEEETTTTEEEEECTT-CC-E-EEEECS------------------------------STTC-----------------
T ss_pred EEEEccCCceEEEECCC-Cc-E-EEEECC------------------------------CCCC-----------------
Confidence 76666567778888773 22 1 111100 0001
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-eecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
.+.+++++++|+++++...++.|..||. +++.... +..+...+.++++ +++.++++.. .+.+..++.++++
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 5778899999987776657789999998 4443221 2344567899999 8888777655 5667777776543
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=3.2e-10 Score=101.45 Aligned_cols=225 Identities=14% Similarity=0.099 Sum_probs=156.9
Q ss_pred CCCeeeeccCCCcceeccccccCCCccccccccc--ccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccc
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVP--EAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHK 316 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 316 (537)
.++.|++++.++.|. +||..+++......... .........+. +.++ +.++.|..||. +++.+...
T Consensus 4 ~~~~lv~~~~~~~v~--~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG--~ilv--s~~~~V~~~d~-~G~~~W~~----- 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIA--IINKDTKEIVWEYPLEKGWECNSVAATKAG--EILF--SYSKGAKMITR-DGRELWNI----- 71 (276)
T ss_dssp CCEEEEECTTCSEEE--EEETTTTEEEEEEECCTTCCCCEEEECTTS--CEEE--ECBSEEEEECT-TSCEEEEE-----
T ss_pred CCcEEEeeCCCCEEE--EEECCCCeEEEEeCCCccCCCcCeEECCCC--CEEE--eCCCCEEEECC-CCCEEEEE-----
Confidence 457899999999999 99987754332221110 01111111111 4555 45788999999 66654433
Q ss_pred ccc-CCCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCceeeEEEEe----------------cCCCCEEEEEcCCCcEE
Q psy10942 317 KGH-EKDINCVTVSPNDKLLASGSL-DKTVKVWSTTGGLKLLNVLRG----------------HKKGTQIVSTGADGLLK 378 (537)
Q Consensus 317 ~~~-~~~v~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~----------------~~~~~~l~~~~~d~~i~ 378 (537)
..+ ...+.++.+.|+|+.+++.+. ++.+..+|.. ++.+..+.. .++++++++...++.|.
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVR 149 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred cCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEE
Confidence 222 346888999999999999887 6777777654 444444431 24588999999999999
Q ss_pred EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC----
Q psy10942 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD---- 454 (537)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---- 454 (537)
.||.. ++.+.++.... ...++.+.+++++++++..++.|..+|..+++.+.++..+.
T Consensus 150 ~~d~~-G~~~w~~~~~~------------------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~ 210 (276)
T 3no2_A 150 EIAPN-GQLLNSVKLSG------------------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV 210 (276)
T ss_dssp EECTT-SCEEEEEECSS------------------CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC
T ss_pred EECCC-CCEEEEEECCC------------------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc
Confidence 99998 99888886643 44556778899999998888899999999999999987432
Q ss_pred --cceEEEEEecCCCEEEEEeCC--------CcEEEEEC-CCCeeEEEecCCc
Q psy10942 455 --ASVLRCHFINKGTQIVSTGAD--------GLLKLWSI-KTSTCVSTFDKHA 496 (537)
Q Consensus 455 --~~v~~~~~s~~~~~l~s~~~d--------g~v~vwd~-~~~~~~~~~~~~~ 496 (537)
..+..+...++|.++++.... +..+++++ .+|+.+..+..+.
T Consensus 211 ~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 263 (276)
T 3no2_A 211 QLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKV 263 (276)
T ss_dssp CCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred cccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcc
Confidence 227888889999988887421 23456666 5788888886544
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.36 E-value=1.7e-10 Score=106.10 Aligned_cols=210 Identities=10% Similarity=-0.005 Sum_probs=131.6
Q ss_pred EeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCcee--------------
Q psy10942 291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTVKVWSTTGGLKL-------------- 355 (537)
Q Consensus 291 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~-------------- 355 (537)
+..++.|..||..+++..... .....++...+.+++++++ ++++++. ..+.|.+||.. ....
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVIC-KPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEE-CCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CCCCCEEEEEeCCCCcEEEEE-ecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 456789999998776542111 1111124467899999999 6655544 44578889876 2211
Q ss_pred eEEEEecCCCCEEEEEcCC---------------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEE
Q psy10942 356 LNVLRGHKKGTQIVSTGAD---------------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF 420 (537)
Q Consensus 356 ~~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~ 420 (537)
...+...+++.++++...+ +.|..+|.. ++...... + ......+++
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~-----------------~~~~~~i~~ 179 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-A-----------------FQFPNGIAV 179 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-E-----------------ESSEEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-C-----------------CCCcceEEE
Confidence 1223333445555554433 345555543 32211110 0 014567888
Q ss_pred c----CCCCEEEEE-eCCCcEEEEECC-Cce-----eeeEeecCC-cceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 421 S----PLDRILISS-SGDATIKLWCLT-DYV-----CLKSLEGHD-ASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 421 s----~~~~~l~~~-~~dg~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
+ |+++.++.+ ..++.|.+||.. +++ ....+..+. ..+..++++++|+++++...++.|.+||.++++.
T Consensus 180 ~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC
T ss_pred ecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE
Confidence 9 999766555 467899999976 443 223333343 5678899999999888888889999999987877
Q ss_pred EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEE-eCCCCEEe
Q psy10942 489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG-GWSPQVVV 536 (537)
Q Consensus 489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~-~~dg~i~v 536 (537)
+..+..+...+ .++ +|+|+++.|+.+ ..++.|..
T Consensus 260 ~~~~~~~~~~~-----------~~i---~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 260 KMRIRCPFEKP-----------SNL---HFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp SEEEECSSSCE-----------EEE---EECTTSSEEEEEETTTTEEEE
T ss_pred eEEEeCCCCCc-----------eeE---EECCCCCEEEEEeCCCCeEEE
Confidence 77776665566 788 999999966554 44556654
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=5.9e-10 Score=101.37 Aligned_cols=219 Identities=11% Similarity=0.010 Sum_probs=130.7
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC-
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK- 364 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~- 364 (537)
.++++...++.|..||..++.... ......+.+++++|+|+++++ . ++.|.+||.. ..+..........
T Consensus 26 ~l~~~d~~~~~i~~~d~~~~~~~~-------~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~-~g~~~~~~~~~~~~ 95 (297)
T 3g4e_A 26 SLLFVDIPAKKVCRWDSFTKQVQR-------VTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWK-EQSAVVLATVDNDK 95 (297)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEE-------EECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETT-TTEEEEEEECCTTC
T ss_pred EEEEEECCCCEEEEEECCCCcEEE-------EeCCCceEEEEECCCCCEEEE-E-CCeEEEEECC-CCcEEEEEecCCCC
Confidence 356667778999999998875421 123467899999999995554 4 5679999987 3332222111110
Q ss_pred -CC--EEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCce--E--EeeeeEEEEcCCCCEEEEE-eCCCcE
Q psy10942 365 -GT--QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI--I--TGGVWFVNFSPLDRILISS-SGDATI 436 (537)
Q Consensus 365 -~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~--~~~i~~~~~s~~~~~l~~~-~~dg~i 436 (537)
.. .-+....+|.+.+-+................++. +.+++... . ......++|+||++.|+.+ +.++.|
T Consensus 96 ~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~--~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i 173 (297)
T 3g4e_A 96 KNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS--LFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp SSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE--ECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred CCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE--EECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcE
Confidence 00 0122233343333221110000000000000000 11111100 0 0145789999999877554 457889
Q ss_pred EEEEC--CCcee-----eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCc
Q psy10942 437 KLWCL--TDYVC-----LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHK 509 (537)
Q Consensus 437 ~i~d~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 509 (537)
.+|++ .++.. ...+..+......++++++|++.++....+.|.+||.++++.+..+..+...+
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~---------- 243 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT---------- 243 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE----------
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc----------
Confidence 99987 44432 22333344567899999999988888888899999998899999888776677
Q ss_pred cccccceeee-cCCCEEEEEeC
Q psy10942 510 GFGLPRQLCS-RNSDCEYRGGW 530 (537)
Q Consensus 510 ~~~~~~~~~s-~~~~~l~s~~~ 530 (537)
+++ +|. ||++.|+.++.
T Consensus 244 -t~~---~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 244 -TSC---CFGGKNYSEMYVTCA 261 (297)
T ss_dssp -EEE---EEESGGGCEEEEEEB
T ss_pred -eEE---EEeCCCCCEEEEEcC
Confidence 888 998 89988776554
No 207
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.35 E-value=1e-10 Score=118.40 Aligned_cols=383 Identities=10% Similarity=-0.016 Sum_probs=206.4
Q ss_pred CcceEEEecCcceEEEEEcCccceeeeeccccccce----------eeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942 15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLET----------CAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET 84 (537)
Q Consensus 15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~ 84 (537)
.+..++.++.++.|.-+|.++|+.+-++........ ....+ .+..+++++.++.|..+|.
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~----------~~~~v~v~~~dg~l~alD~ 145 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL----------WKGKVYVGAWDGRLIALDA 145 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE----------ETTEEEEECTTSEEEEEET
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE----------ECCEEEEEcCCCEEEEEEC
Confidence 455677777888999999999999887764332110 01111 1235677777999999999
Q ss_pred cceehhhhcCCC------cceEEEEEeccccEEEEEeC------CceEEEEecccccCcccccccccceeEEeecchhhh
Q psy10942 85 SAVKELYQHGLS------SPLVRIVRSSVKRMYAVVTA------DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEI 152 (537)
Q Consensus 85 ~~~~~~~~~~~~------~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v 152 (537)
.+|+.+.+.... ..+.+--...++ .+++++. ++.|+.+|..+ ++.+-++.......
T Consensus 146 ~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~t-----------G~~~W~~~~~~~~~ 213 (677)
T 1kb0_A 146 ATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAET-----------GERKWRWFSVPGDP 213 (677)
T ss_dssp TTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTT-----------CCEEEEEESSCCCT
T ss_pred CCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCC-----------CcEEEEeccCCCCc
Confidence 999988776643 122211111234 4455443 68999999999 66666665433211
Q ss_pred hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942 153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL 231 (537)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~ 231 (537)
......+ . ...+ . ..|.. . +... .. +. ......+
T Consensus 214 ~~~~~~~-~-------~~~g-----~-----------------~~w~~-------~-g~~~~~~-----~g--~~~w~~~ 248 (677)
T 1kb0_A 214 SKPFEDE-S-------MKRA-----A-----------------RTWDP-------S-GKWWEAG-----GG--GTMWDSM 248 (677)
T ss_dssp TSCCSSH-H-------HHHH-----H-----------------TTSCG-------G-GCHHHHC-----EE--CCCCSCE
T ss_pred ccccccc-c-------cccc-----c-----------------ccccc-------c-CceeEeC-----CC--cccccce
Confidence 1111110 0 0000 1 12210 0 0000 10 12 2222345
Q ss_pred eccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeee
Q psy10942 232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNV 311 (537)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~ 311 (537)
+++|++..++.+..++. .|...... . ..+.. + .-+.|..+|..+++.....
T Consensus 249 ---~~d~~~~~vy~~~~~~~----~w~~~~~~----------~--~~gd~------~----~~~sv~AlD~~TG~~~W~~ 299 (677)
T 1kb0_A 249 ---TFDAELNTMYVGTGNGS----PWSHKVRS----------P--KGGDN------L----YLASIVALDPDTGKYKWHY 299 (677)
T ss_dssp ---EEETTTTEEEEECCCEE----SSCHHHHS----------T--TCCCC------T----TTTEEEEECTTTCCEEEEE
T ss_pred ---eEcCCCCEEEEECCCCc----cccCCCCC----------c--cCCCC------e----eeEEEEEEECCCCCEEEEE
Confidence 67888888887776543 23322100 0 00000 0 0135777777777664433
Q ss_pred eccccccc-------CCCeEEEEEcCCC---CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEE
Q psy10942 312 LRGHKKGH-------EKDINCVTVSPND---KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWS 381 (537)
Q Consensus 312 ~~~~~~~~-------~~~v~~~~~s~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 381 (537)
. ...| .....-+....+| +.++.++.+|.++++|.. +++.+......+.. ...-+|
T Consensus 300 ~---~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~-tG~~l~~~~~~~~~----------~~~~~d 365 (677)
T 1kb0_A 300 Q---ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT-NGKFISAKNFVPVN----------WASGYD 365 (677)
T ss_dssp E---SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT-TCCEEEEEESSCCS----------SEEEEC
T ss_pred e---cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC-CCCEeccccccccC----------cccccC
Confidence 1 1111 1122223333467 678888888999999988 56666555443311 011122
Q ss_pred CCCCeeeeeeccC-CcceEEEEEec--CCCceEEeeeeEEEEcCCCCEEEEEeC--------------------------
Q psy10942 382 IKTSTCVSTFDKH-ALKIWTLAITK--DENQIITGGVWFVNFSPLDRILISSSG-------------------------- 432 (537)
Q Consensus 382 ~~~~~~~~~~~~~-~~~i~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~-------------------------- 432 (537)
.++..+..-... ...- ....| .|. ..-..++|+|++.++++...
T Consensus 366 -~~g~~~~~~~~~~~~~~--~~~~P~~~G~----~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 438 (677)
T 1kb0_A 366 -KHGKPIGIAAARDGSKP--QDAVPGPYGA----HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGT 438 (677)
T ss_dssp -TTSCEEECGGGGCTTSC--EECSSCTTCS----SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGG
T ss_pred -CCCceeeccccCcCCCc--cEECcCcccc----cCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccc
Confidence 222222100000 0000 00000 000 01123455565555554322
Q ss_pred -----------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942 433 -----------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495 (537)
Q Consensus 433 -----------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 495 (537)
.|.|..||+.+++.+..++ +..++....+..++.+++.++.||.+++||.++|+.+..+...
T Consensus 439 ~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 439 GWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp TCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 2789999999999998887 3445556667778889999999999999999999999998755
Q ss_pred ccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942 496 ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG 528 (537)
Q Consensus 496 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~ 528 (537)
.... ...+ .++++|+.+++.
T Consensus 518 ~~~~----------~~p~---~y~~~G~~~v~~ 537 (677)
T 1kb0_A 518 TGVV----------AAPS---TYMVDGRQYVSV 537 (677)
T ss_dssp SCCC----------SCCE---EEEETTEEEEEE
T ss_pred CCcc----------cCCE---EEEeCCEEEEEE
Confidence 4322 0344 777888755543
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.35 E-value=4.1e-09 Score=95.97 Aligned_cols=258 Identities=5% Similarity=-0.078 Sum_probs=160.8
Q ss_pred cCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccccc--cccceeeeeeCCcceEEEEEeCCCeEEEEEC
Q psy10942 225 LKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV--PEAEHGAFYTGGTVELLASGSLDKTVKVWST 302 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~ 302 (537)
...+.++ ++.++|+.+++...++.+. .|+.. +......... .....+...... .++++...++.|..+|.
T Consensus 19 ~~~p~~i---~~d~~g~l~v~~~~~~~v~--~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 19 DSGPYGI---TSSEDGKVWFTQHKANKIS--SLDQS-GRIKEFEVPTPDAKVMCLIVSSLG--DIWFTENGANKIGKLSK 90 (300)
T ss_dssp TCCEEEE---EECTTSCEEEEETTTTEEE--EECTT-SCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT
T ss_pred CCCccee---eECCCCCEEEEcCCCCeEE--EECCC-CceEEEECCCCCCcceeEEECCCC--CEEEEecCCCeEEEECC
Confidence 5678899 9999999888877788888 88877 3221110000 001111111111 35555555788999998
Q ss_pred CCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------eEEEEecCCCCEEEEEc
Q psy10942 303 TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL----------LNVLRGHKKGTQIVSTG 372 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~l~~~~ 372 (537)
. ++.. .. ........+.++++.++++++++...++.|..+|.. .... ...+...+++..+++..
T Consensus 91 ~-g~~~-~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 91 K-GGFT-EY---PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp T-SCEE-EE---ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred C-CCeE-Ee---cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 7 4331 11 112234668999999999888877667888888876 2211 22333445566666666
Q ss_pred CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE-ee
Q psy10942 373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS-LE 451 (537)
Q Consensus 373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~ 451 (537)
.++.|..+|. +++... +.. +... ..+..+++++++++.++....+.|.+||. +++.... +.
T Consensus 165 ~~~~i~~~~~-~g~~~~-~~~-----------~~~~----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 226 (300)
T 2qc5_A 165 QNNSIGRITN-TGKLEE-YPL-----------PTNA----AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIP 226 (300)
T ss_dssp TTTEEEEECT-TCCEEE-EEC-----------SSTT----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred CCCeEEEECC-CCcEEE-eeC-----------CCCC----CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECC
Confidence 6777888877 443322 111 0000 15678899999987777666778999998 4443332 33
Q ss_pred cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
.+...+.+++++++|+++++...++.|..|+. +++.... +......+ .++ ++.++|+++++..
T Consensus 227 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-----------~~i---~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 227 TPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEP-----------HGI---TFGKDGSVWFALK 290 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCC-----------CCE---EECTTSCEEEECS
T ss_pred CCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCcc-----------cee---EeCCCCCEEEEcc
Confidence 34566899999999987777666789999998 4544321 22223334 777 9999998766544
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=3.8e-11 Score=111.16 Aligned_cols=164 Identities=10% Similarity=0.022 Sum_probs=123.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc----------ee--------eEEEEecCCCCEEEEEcCCCcEEEEECC
Q psy10942 322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGL----------KL--------LNVLRGHKKGTQIVSTGADGLLKLWSIK 383 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----------~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 383 (537)
.++.+++++...++++|+.++ +.+|++..-. +. +..+.. ++..|+++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 688999999999999999875 6669854211 01 333344 67888888 88999999998
Q ss_pred CCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe
Q psy10942 384 TSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI 463 (537)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s 463 (537)
+.........+.. ++.++.+.+. .++++..||.|.+||++++.... +...|++++||
T Consensus 115 sl~~~~~~~~~~~-----------------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WS 171 (388)
T 1xip_A 115 ELSEFRTVTSFEK-----------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVT 171 (388)
T ss_dssp STTCEEEEEECSS-----------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEEC
T ss_pred hhhccCccceeec-----------------ceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEc
Confidence 8765555544444 3334444433 28888999999999999876543 44689999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCee--EEEe------c---CCccceeccCCCCCCccccccceeeecCCCEEEEE
Q psy10942 464 NKGTQIVSTGADGLLKLWSIKTSTC--VSTF------D---KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRG 528 (537)
Q Consensus 464 ~~~~~l~s~~~dg~v~vwd~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~ 528 (537)
|+| ++.|..||.+++|+...++. ...+ . +|...| .++ .|.+++.+|++=
T Consensus 172 pkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V-----------~sI---~wl~~~~flv~y 231 (388)
T 1xip_A 172 NSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP-----------LSV---TILSPQDFLAVF 231 (388)
T ss_dssp SSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE-----------EEE---EESSSSEEEEEE
T ss_pred CCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeE-----------EEE---EEecCCeEEEEE
Confidence 999 78899999999999887775 5566 2 356677 888 999999998863
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.31 E-value=7.8e-10 Score=100.80 Aligned_cols=273 Identities=8% Similarity=-0.044 Sum_probs=160.6
Q ss_pred cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeee-ccccC
Q psy10942 97 SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASN-EYLNG 175 (537)
Q Consensus 97 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~ 175 (537)
..+.++++.++|+..++...++.|.+||... ......+..+...+..+++. +++. ++++.. .+.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~-~~g~-l~v~~~~~~~-- 84 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQSG-----------RIKEFEVPTPDAKVMCLIVS-SLGD-IWFTENGANK-- 84 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTS-----------CEEEEECSSTTCCEEEEEEC-TTSC-EEEEETTTTE--
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCCC-----------ceEEEECCCCCCcceeEEEC-CCCC-EEEEecCCCe--
Confidence 5789999999998877766778999999773 11111222233457788887 5555 444433 333
Q ss_pred CcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCccee
Q psy10942 176 GDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLE 254 (537)
Q Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~ 254 (537)
| ..+|. . ++.. +. .... ...+.++ ++.++|+++++...++.+.
T Consensus 85 --v-----------------~~~d~-------~-g~~~~~~---~~~~--~~~~~~i---~~~~~g~l~v~~~~~~~i~- 128 (300)
T 2qc5_A 85 --I-----------------GKLSK-------K-GGFTEYP---LPQP--DSGPYGI---TEGLNGDIWFTQLNGDRIG- 128 (300)
T ss_dssp --E-----------------EEECT-------T-SCEEEEE---CSST--TCCEEEE---EECSTTCEEEEETTTTEEE-
T ss_pred --E-----------------EEECC-------C-CCeEEec---CCCC--CCCCccc---eECCCCCEEEEccCCCeEE-
Confidence 6 55665 4 2222 11 0133 4668889 8999998888877677888
Q ss_pred ccccccCCCcccccccc---cccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC
Q psy10942 255 ELEKRKTYHFPLFGIFV---PEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN 331 (537)
Q Consensus 255 ~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 331 (537)
.++.. +...... .. .....+...... +++++...++.|..++. +++... . ....+...+.+++++++
T Consensus 129 -~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~-~g~~~~-~---~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 129 -KLTAD-GTIYEYD-LPNKGSYPAFITLGSDN--ALWFTENQNNSIGRITN-TGKLEE-Y---PLPTNAAAPVGITSGND 198 (300)
T ss_dssp -EECTT-SCEEEEE-CSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEE-E---ECSSTTCCEEEEEECTT
T ss_pred -EECCC-CCEEEcc-CCCCCCCceeEEECCCC--CEEEEecCCCeEEEECC-CCcEEE-e---eCCCCCCCcceEEECCC
Confidence 88776 2211110 00 001111111111 34555555778888887 333221 1 11233456788999988
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceE
Q psy10942 332 DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQII 411 (537)
Q Consensus 332 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 411 (537)
+++.++....+.|.+++.. .. ... +.. .....
T Consensus 199 g~l~v~~~~~~~i~~~~~~-g~-~~~-~~~------------------------------~~~~~--------------- 230 (300)
T 2qc5_A 199 GALWFVEIMGNKIGRITTT-GE-ISE-YDI------------------------------PTPNA--------------- 230 (300)
T ss_dssp SSEEEEETTTTEEEEECTT-CC-EEE-EEC------------------------------SSTTC---------------
T ss_pred CCEEEEccCCCEEEEEcCC-Cc-EEE-EEC------------------------------CCCCC---------------
Confidence 8776666556677777763 21 111 100 00000
Q ss_pred EeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceee-eEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10942 412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCL-KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI 483 (537)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~ 483 (537)
.+.+++++++|+++++...++.|..||.. ++.. ..+......+.+++++++|+++++.. . .|..+|.
T Consensus 231 --~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 231 --RPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp --CEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred --CceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 56788899999877766667899999984 4332 22333445688999999998666554 4 6766664
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.28 E-value=2.9e-09 Score=97.77 Aligned_cols=237 Identities=12% Similarity=0.045 Sum_probs=144.2
Q ss_pred cCeEEEEeccCcccCCCeeee-------ccCCCcceeccccccCCCcccccc-----cccccceeeeeeCCcceEEEEEe
Q psy10942 225 LKTVTLLERGKTVKEEDLFPR-------QSMEPSTLEELEKRKTYHFPLFGI-----FVPEAEHGAFYTGGTVELLASGS 292 (537)
Q Consensus 225 ~~~v~~~~~~~~s~~~~~l~~-------~~~d~~i~~~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~l~~~~ 292 (537)
-....++ +|+++++.+++ +..++.|. .|+..++....... .......+...... ..+..+.
T Consensus 17 ~~~~~~~---~~~~~g~l~~~~~~~~~~~~~~~~i~--~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--g~l~v~~ 89 (314)
T 1pjx_A 17 IPGAEGP---VFDKNGDFYIVAPEVEVNGKPAGEIL--RIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDA--NQLFVAD 89 (314)
T ss_dssp CTTCEEE---EECTTSCEEEEETTCEETTEECCEEE--EECTTTCCEEEEECCEETTEECCEEEEEECSSS--SEEEEEE
T ss_pred CCCccCc---eECCCCCEEEEEeccccCCCCCCEEE--EEeCCCCcEEEEEecccCCCCCCCceEEEecCC--CcEEEEE
Confidence 3455778 89999988888 67788899 99876643211110 00001111111110 2344444
Q ss_pred CCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEEccCCcee--
Q psy10942 293 LDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD---------------KTVKVWSTTGGLKL-- 355 (537)
Q Consensus 293 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------~~i~i~d~~~~~~~-- 355 (537)
..+.|.+||.+ ++................+.+++++|+|+++++...+ +.|..++.......
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 168 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD 168 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEec
Confidence 45578899988 5432110011111122457899999999887776554 45666665411111
Q ss_pred -----eEEEEec----CCCCEE-EEEcCCCcEEEEECC-CCeee-----eeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942 356 -----LNVLRGH----KKGTQI-VSTGADGLLKLWSIK-TSTCV-----STFDKHALKIWTLAITKDENQIITGGVWFVN 419 (537)
Q Consensus 356 -----~~~~~~~----~~~~~l-~~~~~d~~i~i~d~~-~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~ 419 (537)
...+... ++++.+ ++...++.|.+||.. +++.. ..+..+. .+.+..++
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~p~~i~ 232 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH----------------EGGADGMD 232 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS----------------SCEEEEEE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC----------------CCCCCceE
Confidence 1223344 556444 444567889999876 33311 1111110 01467789
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEE-EEeCCCcEEEEECCC
Q psy10942 420 FSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV-STGADGLLKLWSIKT 485 (537)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~ 485 (537)
++++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+++.|+ +...++.|..|++..
T Consensus 233 ~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999999888887889999999987777777777767899999999999555 445568899999864
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.28 E-value=3.1e-10 Score=104.86 Aligned_cols=278 Identities=6% Similarity=-0.118 Sum_probs=167.2
Q ss_pred EEEEEeCccc----eEEeeeccceehhhhcCCCcceEEEEEeccccEEEEEe----------CCceEEEEecccccCccc
Q psy10942 68 TFVLAGGEKS----LLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVT----------ADHNISLYRLNSETGLEE 133 (537)
Q Consensus 68 ~~~~~~~~~~----~i~~wd~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~ 133 (537)
+.+++...++ .|.+.|..+++.+.++.....- .++|+||+++++++. .++.|.+||..+
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T------ 105 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT------ 105 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT------
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC------
Confidence 4444444344 7889999999999888754433 799999999999886 368899999999
Q ss_pred ccccccceeEEeecc-------hhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHH--HHHHHHh
Q psy10942 134 RPNKILKFRKQFVGF-------SDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKT--FERILEA 204 (537)
Q Consensus 134 ~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--wd~~~~~ 204 (537)
++.+.++..+ ......++|+ |++++++++..... ..+ .+ +|.
T Consensus 106 -----~~vv~~I~v~~~~~~~~g~~P~~ia~S-pDGk~lyVan~~~~--~~v-----------------~V~~iD~---- 156 (368)
T 1mda_H 106 -----FLPIADIELPDAPRFSVGPRVHIIGNC-ASSACLLFFLFGSS--AAA-----------------GLSVPGA---- 156 (368)
T ss_dssp -----CCEEEEEEETTSCSCCBSCCTTSEEEC-TTSSCEEEEECSSS--CEE-----------------EEEETTT----
T ss_pred -----CCEEEEEECCCccccccCCCcceEEEc-CCCCEEEEEccCCC--CeE-----------------EEEEEch----
Confidence 7888887643 1246788999 78888887753321 226 66 777
Q ss_pred hhcccccccccccccccCCCcCeEEEEeccCcccCCC-eeeeccCCCcceeccccccCCCcccccccccccceeeeeeCC
Q psy10942 205 KFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEED-LFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGG 283 (537)
Q Consensus 205 ~~~~~~~~~l~~~~~~~h~~~~~v~~~~~~~~s~~~~-~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (537)
.+ ...+. -. + +. ...|+++ .+++.+.|+.+. +.++......
T Consensus 157 ---~t-v~~i~-----v~---~---~~---~~~p~g~~~~~~~~~dg~~~--~vd~~~~~~~------------------ 198 (368)
T 1mda_H 157 ---SD-DQLTK-----SA---S---CF---HIHPGAAATHYLGSCPASLA--ASDLAAAPAA------------------ 198 (368)
T ss_dssp ---EE-EEEEE-----CS---S---CC---CCEEEETTEEECCCCTTSCE--EEECCSSCCC------------------
T ss_pred ---hh-ceEEE-----CC---C---ce---EEccCCCeEEEEEcCCCCEE--EEECcccccc------------------
Confidence 54 11122 00 0 12 2334442 233344455554 4333320000
Q ss_pred cceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-eeeE-----
Q psy10942 284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-KLLN----- 357 (537)
Q Consensus 284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~----- 357 (537)
++.+.. ..+ ....-...+. . ++++..++..+. +.+.+.|+.... +.+.
T Consensus 199 ----------~~~v~~--~~t---------~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~ 252 (368)
T 1mda_H 199 ----------AGIVGA--QCT---------GAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGN 252 (368)
T ss_dssp ----------CEECCC--CSC---------TTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSS
T ss_pred ----------CCeEEE--Eee---------eeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEec
Confidence 000000 000 0001112222 2 556666555556 888888875211 1111
Q ss_pred ---------------EEEecCCCCEEEEEcC---------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942 358 ---------------VLRGHKKGTQIVSTGA---------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413 (537)
Q Consensus 358 ---------------~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 413 (537)
.+..++++..++.+.. ++.+.++|+.+.+.+..+....
T Consensus 253 ~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~------------------ 314 (368)
T 1mda_H 253 ESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH------------------ 314 (368)
T ss_dssp CTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE------------------
T ss_pred cccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC------------------
Confidence 1345566777765432 2356699999998888775443
Q ss_pred eeeEEEEcCCCC-EEEEEe-CCCcEEEEECCCceeeeEeecCCcceEEEEEec
Q psy10942 414 GVWFVNFSPLDR-ILISSS-GDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464 (537)
Q Consensus 414 ~i~~~~~s~~~~-~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 464 (537)
....++|+|||+ .+++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 567889999997 455555 589999999999999999886544 35555543
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.27 E-value=6.5e-09 Score=95.77 Aligned_cols=200 Identities=11% Similarity=-0.011 Sum_probs=128.4
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee----------
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL---------- 355 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~---------- 355 (537)
.++++...++.|..||..+++... + .....+.+++++|+|+++++. .+ .|.+||... ++.
T Consensus 62 ~l~~~d~~~~~i~~~d~~~~~~~~------~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~-g~~~~~~~~~~~~ 131 (326)
T 2ghs_A 62 TAWWFNILERELHELHLASGRKTV------H-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTAT-GVLTLHAELESDL 131 (326)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEE------E-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTT-CCEEEEECSSTTC
T ss_pred EEEEEECCCCEEEEEECCCCcEEE------E-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCC-CcEEEEeeCCCCC
Confidence 356667778899999998875321 1 123579999999999877754 44 489999763 222
Q ss_pred ----eEEEEecCCCCEEEEEcC------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC
Q psy10942 356 ----LNVLRGHKKGTQIVSTGA------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR 425 (537)
Q Consensus 356 ----~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~ 425 (537)
+..+...+++.++++... .+.|..++ +++...... . ......++|+||++
T Consensus 132 ~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~-----------------~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 132 PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-D-----------------ISIPNSICFSPDGT 191 (326)
T ss_dssp TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-E-----------------ESSEEEEEECTTSC
T ss_pred CCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-C-----------------CcccCCeEEcCCCC
Confidence 222333445554443321 12333333 232211100 0 01456789999998
Q ss_pred EEEEEe-CCCcEEEEECC--Cc-ee-----eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCc
Q psy10942 426 ILISSS-GDATIKLWCLT--DY-VC-----LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 496 (537)
Q Consensus 426 ~l~~~~-~dg~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 496 (537)
.++.+. .++.|.+|++. ++ +. ...+.........++++++|.++++...++.|.+|+. +++.+..+..+.
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~ 270 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG 270 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC
Confidence 776554 56899999985 55 31 2223223455788999999998887777788999998 677777777666
Q ss_pred cceeccCCCCCCccccccceeee-cCCCEEEEEeC
Q psy10942 497 LKIRNSDSENDHKGFGLPRQLCS-RNSDCEYRGGW 530 (537)
Q Consensus 497 ~~i~~~~~~~~~~~~~~~~~~~s-~~~~~l~s~~~ 530 (537)
..+ .++ +|+ |+++.|+.++.
T Consensus 271 ~~~-----------~~~---af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 271 KQT-----------TCP---AFIGPDASRLLVTSA 291 (326)
T ss_dssp SBE-----------EEE---EEESTTSCEEEEEEB
T ss_pred CCc-----------EEE---EEecCCCCEEEEEec
Confidence 667 888 998 89887765543
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.25 E-value=2.4e-09 Score=97.76 Aligned_cols=206 Identities=13% Similarity=0.037 Sum_probs=127.3
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeE---------
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN--------- 357 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~--------- 357 (537)
++++...++.|..|+...... .+..+...+..++++++|+++++...++.|.+|+.......+.
T Consensus 59 l~~~d~~~~~i~~~~~~g~~~-------~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~ 131 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWREDGTVD-------VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLN 131 (305)
T ss_dssp EEEEETTTTEEEEEETTSCEE-------EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECS
T ss_pred EEEEECCCCEEEEEeCCCCEE-------EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccC
Confidence 566777788999999843321 2233456789999999999776666667899998762211111
Q ss_pred ---EEEecCCCCEEEE----EcC-------------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE
Q psy10942 358 ---VLRGHKKGTQIVS----TGA-------------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF 417 (537)
Q Consensus 358 ---~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 417 (537)
.+...++|.++++ +.. .+.|..+|..+++.. .+. . ......
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~-----------~~~-~-------~~~p~g 192 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ-----------RMA-D-------LDHPNG 192 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-----------EEE-E-------ESSEEE
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-----------EEe-c-------CCCCcc
Confidence 1222233444443 211 123333443333221 111 0 014567
Q ss_pred EEEcCCCCEEEEEeCC------CcEEEEECCCceee--eEe-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 418 VNFSPLDRILISSSGD------ATIKLWCLTDYVCL--KSL-EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 418 ~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
++|+||++.|+.+... +.|.+|++...... ..+ ....+....++++++|++.++ +.+ .|.+|+. +++.
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~ 269 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQL 269 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCE
Confidence 8999999988877665 68999998754311 111 112344567899999995554 444 4999997 6777
Q ss_pred EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942 489 VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 489 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v 536 (537)
+..+..+. .+ ..+ +|+|+++.|+.++.++..++
T Consensus 270 ~~~~~~~~-~~-----------~~~---~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 270 LGHIPTPG-TA-----------SNC---TFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEEECSS-CC-----------CEE---EECTTSCEEEEEETTEEEEE
T ss_pred EEEEECCC-ce-----------eEE---EEeCCCCEEEEEcCCeEEEE
Confidence 77776554 35 777 99999999988877765544
No 215
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.24 E-value=1e-07 Score=99.36 Aligned_cols=397 Identities=8% Similarity=0.029 Sum_probs=212.7
Q ss_pred eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecc-ccc---cceeeeEeecCccccccCCcEEEEEeCccceE
Q psy10942 4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA-YES---LETCAVFHLSDETESKSGGKTFVLAGGEKSLL 79 (537)
Q Consensus 4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 79 (537)
.|++|... ++|.+. .+..+| +..||.++++....... ... +..+ ...+ ++.+.+ ++..| |
T Consensus 89 ~I~~i~~d--~~g~lW-igT~~G-l~~yd~~~~~f~~~~~~~~~~~~~i~~i--~~d~--------~g~lwi-~t~~g-l 152 (795)
T 4a2l_A 89 ISRIVKTD--SQGRVW-IGTRDG-LSRYDEEKDIFQNFFYEKNGKHLQVNGI--EEIS--------PEQLLI-STPEG-L 152 (795)
T ss_dssp CEEEEEEC--TTSCEE-EEESSC-EEEEETTTTEEEEECCEETTEECCCCEE--EEEE--------TTEEEE-EETTE-E
T ss_pred ceeEEEEC--CCCCEE-EEeCCc-hheeCCCCCeEEeccccccCCCceEEEE--EECC--------CCCEEE-EECCc-e
Confidence 36777766 566544 444567 89999877654332111 111 3333 3333 444444 33344 8
Q ss_pred EeeeccceehhhhcCCC--cc-eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEe-ecchhhhhhh
Q psy10942 80 HYYETSAVKELYQHGLS--SP-LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQF-VGFSDEILDI 155 (537)
Q Consensus 80 ~~wd~~~~~~~~~~~~~--~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 155 (537)
..||..+++........ .. |.++...+++.+.+ ++.++.|..|+..++ +..... ..+...|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~i~~i 220 (795)
T 4a2l_A 153 IMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQK-----------TFEKVIPILGTKQIQAI 220 (795)
T ss_dssp EEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTC-----------CEEECC----CCCEEEE
T ss_pred EEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCC-----------eEEEecCCCCCCeeEEE
Confidence 88997765433221111 23 88998888887655 565545888987762 222111 1123346666
Q ss_pred hcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc---cccCCCcCeEEEE
Q psy10942 156 ALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE---RLGRDELKTVTLL 231 (537)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~---~~~h~~~~~v~~~ 231 (537)
... + .+.+.+++.... + .+||. .+.+.. +.... ..-. ...|.++
T Consensus 221 ~~d-~-~g~lwigt~~~G----l-----------------~~~~~-------~~~~~~~~~~~~~~~~~l~--~~~i~~i 268 (795)
T 4a2l_A 221 LQQ-S-PTRIWVATEGAG----L-----------------FLINP-------KTKEIKNYLHSPSNPKSIS--SNYIRSL 268 (795)
T ss_dssp EEE-E-TTEEEEEEBSSC----E-----------------EEEET-------TTTEEEEECCCTTCTTSCS--CSBEEEE
T ss_pred EEc-C-CCCEEEEECCCC----e-----------------EEEeC-------CCCeEEEeecCCCCccccC--CCeEEEE
Confidence 654 3 445667664433 5 55555 443332 21000 0012 4568999
Q ss_pred eccCcccCCCeeeeccCCCcceeccccccCCCccccccc--------ccccceeeeeeCCcceEEEEEeCCCeEEEEECC
Q psy10942 232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF--------VPEAEHGAFYTGGTVELLASGSLDKTVKVWSTT 303 (537)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~--------~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~ 303 (537)
...++|.+.+.. .+| +. +++............ ...+..+..... ..+-.|+.++-|..++..
T Consensus 269 ---~~d~~g~lWigt-~~G-l~--~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~---g~lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 269 ---AMDSQNRLWIGT-FND-LN--IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ---GGMWLGTYFGGLNYYHPI 338 (795)
T ss_dssp ---EECTTSCEEEEE-SSC-EE--EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT---SCEEEEESSSCEEEECGG
T ss_pred ---EEcCCCCEEEEe-CCh-hh--eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC---cCEEEEECCCCeEEeCCC
Confidence 888888765543 444 66 777654321110000 000111110001 345567777778888765
Q ss_pred CCceeeeeecc-cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-----------------eeeEEEEecCCC
Q psy10942 304 GGLKLLNVLRG-HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-----------------KLLNVLRGHKKG 365 (537)
Q Consensus 304 ~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-----------------~~~~~~~~~~~~ 365 (537)
+.....-.... ...-....|.++...++|++ ..|+.++-+..|+..... ..+..+....++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 54321100000 00112456999999988864 456777678888876211 112233333445
Q ss_pred CEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCce
Q psy10942 366 TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYV 445 (537)
Q Consensus 366 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 445 (537)
..+..|+.++-+..+|..+++......... .+....|.++...++|++.+.. . +.+.+||..+++
T Consensus 418 ~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~-------------~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 418 SLVYIGTHAGGLSILHRNSGQVENFNQRNS-------------QLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS 482 (795)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEECTTTS-------------CCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred CEEEEEeCcCceeEEeCCCCcEEEeecCCC-------------CcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence 536667776778889988765432211100 0111267888888888866554 4 458899988765
Q ss_pred eeeEeec------CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 446 CLKSLEG------HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 446 ~~~~~~~------~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
....... ....|.++...++|++.+... +-+..||..+++.
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 4332211 235689999999988666554 4588999877665
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=2.3e-10 Score=116.19 Aligned_cols=124 Identities=11% Similarity=0.018 Sum_probs=79.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE---E-------------EEcCCCcEEEEECCCCeee
Q psy10942 325 CVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI---V-------------STGADGLLKLWSIKTSTCV 388 (537)
Q Consensus 325 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l---~-------------~~~~d~~i~i~d~~~~~~~ 388 (537)
.++|+|+..++++...+....++..... .. +.....+-.+ + ....+|.+..||+.+++.+
T Consensus 393 ~~a~dp~~~~~yv~~~~~~~~~~~~~~~-~~---~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~ 468 (689)
T 1yiq_A 393 PMSYNPDTGLVYIPAHIMSAYYEHIPEA-PK---RNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA 468 (689)
T ss_dssp CCEEETTTTEEEEEEEECCEEEECCSSC-CC---CCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE
T ss_pred cceECCCCCEEEEeccccceeeeecccc-cc---ccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeE
Confidence 3789999889998887766666544311 00 0000000000 0 0012588999999999988
Q ss_pred eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc-eEEEEEecCCC
Q psy10942 389 STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS-VLRCHFINKGT 467 (537)
Q Consensus 389 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~ 467 (537)
..+..+. +.....+...+.+++.++.||.++.||.++++.+.+++...+. ..-+.|..+|+
T Consensus 469 W~~~~~~------------------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 469 WEVPYVT------------------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEESS------------------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred eEccCCC------------------CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 7775543 1222234456778999999999999999999999998855332 24467778887
Q ss_pred EEE
Q psy10942 468 QIV 470 (537)
Q Consensus 468 ~l~ 470 (537)
..+
T Consensus 531 qyv 533 (689)
T 1yiq_A 531 QYV 533 (689)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=4.8e-09 Score=99.60 Aligned_cols=222 Identities=12% Similarity=0.045 Sum_probs=136.5
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEE----
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVL---- 359 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~---- 359 (537)
+++++...++.|++||..++...... .. ..... ++|+|+++.|+++..++ .|.+++...... ...+
T Consensus 143 ~lyv~d~~~~~I~~id~~~g~~~~~~-----~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~~~g~~~ 214 (409)
T 3hrp_A 143 TVLAYQRDDPRVRLISVDDNKVTTVH-----PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PTRIGQLG 214 (409)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE-----ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EEEEEECC
T ss_pred CEEEEecCCCcEEEEECCCCEEEEee-----cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-eEEeeecc
Confidence 35666666789999999877543211 11 12223 89999999999988766 788888763332 2222
Q ss_pred ----------EecCCCCEEEEEcCCCcEEEEECCCCeeeee----eccCCcceEEEEEecCCCceEEeeeeEEEEcCC-C
Q psy10942 360 ----------RGHKKGTQIVSTGADGLLKLWSIKTSTCVST----FDKHALKIWTLAITKDENQIITGGVWFVNFSPL-D 424 (537)
Q Consensus 360 ----------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~-~ 424 (537)
..++++..++.+..++.|+.||..++..... ....... .+...++|+|+ +
T Consensus 215 ~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~---------------~P~~~ia~~p~~g 279 (409)
T 3hrp_A 215 STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGT---------------NPGPYLIYYFVDS 279 (409)
T ss_dssp TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCC---------------SSCCEEEEETTTT
T ss_pred chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCC---------------CccccEEEeCCCC
Confidence 2234344555566788899999887653221 1111000 01127899995 5
Q ss_pred CEEEEEeCCCcEEEEECCCceeeeEeecCC---------------cceEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q psy10942 425 RILISSSGDATIKLWCLTDYVCLKSLEGHD---------------ASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTC 488 (537)
Q Consensus 425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~ 488 (537)
.++++-..++.|+.|+.... +..+.++. .....++++|+|+++++-. .++.|+.|++.+++.
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 55555566789999987643 33333332 3478999999999777777 789999999878864
Q ss_pred EEEecCCccc---eecc-CCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942 489 VSTFDKHALK---IRNS-DSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 489 ~~~~~~~~~~---i~~~-~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v 536 (537)
..+.++... .... ....-..+..+ +++++|.++++-..++.|+.
T Consensus 358 -~~~~g~~~~~g~~~g~~~~~~~~~P~gi---avd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 358 -STVAGQVDVASQIDGTPLEATFNYPYDI---CYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp -EEEEECTTCBSCCCBSTTTCCBSSEEEE---EECSSSEEEEEESTTCEEEE
T ss_pred -EEEeCCCCCCCcCCCChhceEeCCceEE---EEcCCCCEEEEECCCCeEEE
Confidence 444443110 0000 00001123677 99999877777777777764
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.23 E-value=1.4e-09 Score=110.31 Aligned_cols=271 Identities=10% Similarity=0.017 Sum_probs=167.9
Q ss_pred CCCeeeeccCCCcceeccccccCCCcccccccc-cccceeeeeeCCc-c--eEEEEEe------CCCeEEEEECCCCcee
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFV-PEAEHGAFYTGGT-V--ELLASGS------LDKTVKVWSTTGGLKL 308 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~-v--~~l~~~~------~d~~i~i~~~~~~~~~ 308 (537)
++..++.++.|+.+. .+|..+++........ ...... ...... + ..++.+. .++.|+.||..+++..
T Consensus 120 ~~g~v~v~~~dg~l~--AlDa~TG~~~W~~~~~~~~~~~~-~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLE--AIDAKTGQRAWSVDTRADHKRSY-TITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp ETTEEEEECTTSEEE--EEETTTCCEEEEEECCSCTTSCC-BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEccCCEEE--EEECCCCCEeeeecCcCCCCCCc-cccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 456788888889998 8888876543332111 000000 001111 1 3444443 3689999999999876
Q ss_pred eeeeccccc--------------------------ccCCCeEEEEEcCCCCEEEEEeCCCc-------------------
Q psy10942 309 LNVLRGHKK--------------------------GHEKDINCVTVSPNDKLLASGSLDKT------------------- 343 (537)
Q Consensus 309 ~~~~~~~~~--------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~------------------- 343 (537)
.+.....-. .+......++++|+..+++.+..++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 654211000 11111235789999999999987763
Q ss_pred EEEEEccCCceeeEEEEecC-------------------CCC---EEEEEcCCCcEEEEECCCCeeeeeeccCCc-ceEE
Q psy10942 344 VKVWSTTGGLKLLNVLRGHK-------------------KGT---QIVSTGADGLLKLWSIKTSTCVSTFDKHAL-KIWT 400 (537)
Q Consensus 344 i~i~d~~~~~~~~~~~~~~~-------------------~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~i~~ 400 (537)
|..+|.. +++.+-.+...+ ++. .++.++.+|.++++|..+++.+........ ....
T Consensus 277 v~AlD~~-TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 277 IVAVNAD-TGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEETT-TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEcc-CCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 9999998 455544443311 122 677888999999999999998855433221 1111
Q ss_pred EE-------E-------ecCCCceEEe-------eeeEEEEcCCCCEEEEEeC---------------------------
Q psy10942 401 LA-------I-------TKDENQIITG-------GVWFVNFSPLDRILISSSG--------------------------- 432 (537)
Q Consensus 401 ~~-------~-------~~~~~~~~~~-------~i~~~~~s~~~~~l~~~~~--------------------------- 432 (537)
+. . .+++...... .-..++|+|+..++++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 00 0 0111111100 1223677777777666522
Q ss_pred ------------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942 433 ------------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 494 (537)
Q Consensus 433 ------------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 494 (537)
+|.|..||+.+++.+..++.+. ++..-.+...+.+++.++.||.++.||.++|+.+..++.
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 3779999999999999887553 344446677788999999999999999999999998876
Q ss_pred CccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942 495 HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR 527 (537)
Q Consensus 495 ~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s 527 (537)
....+ ...+ .|+.+|++.++
T Consensus 515 ~~~~~----------~~p~---ty~~~G~qyv~ 534 (689)
T 1yiq_A 515 ASGVM----------AAPV---TYSVDGEQYVT 534 (689)
T ss_dssp SSCCC----------SCCE---EEEETTEEEEE
T ss_pred CCCcc----------cCce---EEEECCEEEEE
Confidence 54332 0345 78888885543
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.23 E-value=7.3e-09 Score=97.77 Aligned_cols=253 Identities=8% Similarity=-0.037 Sum_probs=158.2
Q ss_pred CCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccc
Q psy10942 239 EEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG 318 (537)
Q Consensus 239 ~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 318 (537)
++..++.++.++.+. .+|..+++................... ..++.++.++.|..+|..+++............
T Consensus 102 ~~~~v~v~~~~g~l~--a~d~~tG~~~W~~~~~~~~~~~p~~~~---~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVY--ALNTSDGTVAWQTKVAGEALSRPVVSD---GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEE--EEETTTCCEEEEEECSSCCCSCCEEET---TEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEE--EEECCCCCEEEEEeCCCceEcCCEEEC---CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 456777788888888 888887653332211111100000111 467888899999999999988654431110000
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec---------------C----CCCEEEEEcCCCcEEE
Q psy10942 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH---------------K----KGTQIVSTGADGLLKL 379 (537)
Q Consensus 319 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------~----~~~~l~~~~~d~~i~i 379 (537)
........... +..++++..++.+..+|.. .++.+-..... . .+..++.++.++.+..
T Consensus 177 ~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~ 253 (376)
T 3q7m_A 177 SLRGESAPTTA--FGAAVVGGDNGRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA 253 (376)
T ss_dssp --CCCCCCEEE--TTEEEECCTTTEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE
T ss_pred eecCCCCcEEE--CCEEEEEcCCCEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE
Confidence 00000112222 4467778889999999998 44443333211 0 1567788888999999
Q ss_pred EECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC-CcceE
Q psy10942 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASVL 458 (537)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~ 458 (537)
+|..+++.+....... ...+.. ++..++.++.++.|..+|..+++.+...... ...+.
T Consensus 254 ~d~~tG~~~w~~~~~~-------------------~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~ 312 (376)
T 3q7m_A 254 LDLRSGQIMWKRELGS-------------------VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT 312 (376)
T ss_dssp EETTTCCEEEEECCCC-------------------EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC
T ss_pred EECCCCcEEeeccCCC-------------------CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc
Confidence 9999998776654221 111222 3557778888999999999999988776622 22233
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 459 RCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 459 ~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
..... +..|+.++.+|.+.++|..+|+.+.........+ .+.+ .. .+..|+.++.+|.|..|
T Consensus 313 ~~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~-----------~~~~--~~--~~~~l~v~~~~G~l~~~ 374 (376)
T 3q7m_A 313 SPVLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGF-----------QTEP--VA--ADGKLLIQAKDGTVYSI 374 (376)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCB-----------CSCC--EE--ETTEEEEEBTTSCEEEE
T ss_pred CCEEE--CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcc-----------eeCC--EE--ECCEEEEEeCCCEEEEE
Confidence 33332 4578889999999999999999988776544444 2220 22 35678888899988764
No 220
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.22 E-value=2.1e-07 Score=97.03 Aligned_cols=420 Identities=10% Similarity=0.059 Sum_probs=227.8
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecc--ccc-cceeeeEeecCccccccCCcEEEEEeCccceEEe
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA--YES-LETCAVFHLSDETESKSGGKTFVLAGGEKSLLHY 81 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (537)
|.++... +++.+.+... +| |..||.++++....... ... +..+ ...+ ++.+ ..++.++.|..
T Consensus 133 i~~i~~d--~~g~lwi~t~-~g-l~~~~~~~~~~~~~~~~~~~~~~i~~i--~~d~--------~g~l-wigt~~~Gl~~ 197 (795)
T 4a2l_A 133 VNGIEEI--SPEQLLISTP-EG-LIMFDIKESKFIDDSFSTAMHKTIAST--LYRQ--------GDQI-YIGTSTDGLYT 197 (795)
T ss_dssp CCEEEEE--ETTEEEEEET-TE-EEEEETTTTEEECSSSCHHHHTCCEEE--EEEE--------TTEE-EEEESSSCEEE
T ss_pred EEEEEEC--CCCCEEEEEC-Cc-eEEEECCCCEEEeccCCCCCCcceEEE--EECC--------CCCE-EEEECCCCEEE
Confidence 6677666 6776665544 55 88999877654321110 111 3333 3333 3343 34444445888
Q ss_pred eeccceehhhhc--CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-------chhhh
Q psy10942 82 YETSAVKELYQH--GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG-------FSDEI 152 (537)
Q Consensus 82 wd~~~~~~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v 152 (537)
||..+++..... .....|.++...+++.+.+ ++.++-|..||..+ .+....... ....|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~i 265 (795)
T 4a2l_A 198 YSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKT-----------KEIKNYLHSPSNPKSISSNYI 265 (795)
T ss_dssp EETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTT-----------TEEEEECCCTTCTTSCSCSBE
T ss_pred EeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCC-----------CeEEEeecCCCCccccCCCeE
Confidence 988766543221 1235788888888887554 45444488899876 222221111 12346
Q ss_pred hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc---cccCCCcCeE
Q psy10942 153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE---RLGRDELKTV 228 (537)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~---~~~h~~~~~v 228 (537)
.++... + .+.|.+++.. . + .+||. .+.... +.... ..-. ...|
T Consensus 266 ~~i~~d-~-~g~lWigt~~-G----l-----------------~~~~~-------~~~~~~~~~~~~~~~~~l~--~~~i 312 (795)
T 4a2l_A 266 RSLAMD-S-QNRLWIGTFN-D----L-----------------NIYHE-------GTDSFASYSSNPVENGSLS--QRSV 312 (795)
T ss_dssp EEEEEC-T-TSCEEEEESS-C----E-----------------EEEET-------TTTEEEEECCCTTSTTSCS--SSCE
T ss_pred EEEEEc-C-CCCEEEEeCC-h----h-----------------heEcC-------CCCeEEEEecCCCCCCCCC--CCcE
Confidence 777665 3 4557777754 3 5 55555 333322 11000 0012 4679
Q ss_pred EEEeccCcccCCCeeeeccCCCcceeccccccCCCccccccc-------ccccceeeeeeCCcceEEEEEeCCCeEEEEE
Q psy10942 229 TLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIF-------VPEAEHGAFYTGGTVELLASGSLDKTVKVWS 301 (537)
Q Consensus 229 ~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~ 301 (537)
.++ ...++|.+. .|+.++-+. .++............ ...+..+..... ..+-.|+.++-|..|+
T Consensus 313 ~~i---~~D~~g~lW-igt~~~Gl~--~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~---g~lWiGt~~~Gl~~~~ 383 (795)
T 4a2l_A 313 RSI---FMDSQGGMW-LGTYFGGLN--YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD---KNLWIGTNDGGLNLYN 383 (795)
T ss_dssp EEE---EECTTSCEE-EEESSSCEE--EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT---SCEEEEESSSCEEEEC
T ss_pred EEE---EEeCCcCEE-EEECCCCeE--EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC---CCEEEEECCCCeEEEc
Confidence 999 888888654 455555566 676554321110000 000111111111 3466677777788898
Q ss_pred CCCCceeeeeeccc-c---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-------------eeeEEEEecCC
Q psy10942 302 TTGGLKLLNVLRGH-K---KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGL-------------KLLNVLRGHKK 364 (537)
Q Consensus 302 ~~~~~~~~~~~~~~-~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-------------~~~~~~~~~~~ 364 (537)
..++....-. ... . .-....|.++...++++.|..|+.++-+..+|..... ..+..+....+
T Consensus 384 ~~~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 384 PITQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE 462 (795)
T ss_dssp TTTCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred CCCCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence 8766432111 000 0 0124679999999898856677777779999876321 11233333444
Q ss_pred CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942 365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY 444 (537)
Q Consensus 365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 444 (537)
+...+.. . +-+.+||..+++....... . +...+....|.++..+++|++.+.. . +.|..||..++
T Consensus 463 g~lwigt-~-~Gl~~~~~~~~~~~~~~~~-~----------~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~ 527 (795)
T 4a2l_A 463 GNLWLGT-L-SALVRFNPEQRSFTTIEKE-K----------DGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGL 527 (795)
T ss_dssp SCEEEEE-S-SCEEEEETTTTEEEECCBC-T----------TCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETT
T ss_pred CCEEEEe-c-CceeEEeCCCCeEEEcccc-c----------cccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCC
Confidence 5544444 3 4588888877654322111 0 0000111267888888888866654 4 56888998776
Q ss_pred eeeeEee-------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC----ccceeccCCCCCCccccc
Q psy10942 445 VCLKSLE-------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH----ALKIRNSDSENDHKGFGL 513 (537)
Q Consensus 445 ~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~ 513 (537)
+. .+. .....|.++...++|.+.++.. . -+..||..+++.. .+... ...| .++
T Consensus 528 ~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~-~~~~~~gl~~~~i-----------~~i 591 (795)
T 4a2l_A 528 DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIK-RYNTTNGLPNNVV-----------YGI 591 (795)
T ss_dssp EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEE-EECGGGTCSCSCE-----------EEE
T ss_pred eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEE-EeCCCCCCchhhe-----------EEE
Confidence 54 222 1234688999999988666543 4 5889998776543 33221 1233 555
Q ss_pred cceeeecCCCEEEEE
Q psy10942 514 PRQLCSRNSDCEYRG 528 (537)
Q Consensus 514 ~~~~~s~~~~~l~s~ 528 (537)
...++|++.+++
T Consensus 592 ---~~d~~g~lWi~t 603 (795)
T 4a2l_A 592 ---LEDSFGRLWLST 603 (795)
T ss_dssp ---EECTTSCEEEEE
T ss_pred ---EECCCCCEEEEc
Confidence 777777766654
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=9.6e-10 Score=102.20 Aligned_cols=200 Identities=8% Similarity=-0.093 Sum_probs=125.8
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEccCCceeeEEEEec----------------CC-CCEEEEEc---
Q psy10942 318 GHEKDINCVTVSPNDKLLASGSL-----DKTVKVWSTTGGLKLLNVLRGH----------------KK-GTQIVSTG--- 372 (537)
Q Consensus 318 ~~~~~v~~~~~s~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~----------------~~-~~~l~~~~--- 372 (537)
.+...+..++++++++++++-.. +..|.+||+. +.+.+..+... ++ +..+++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 34567899999999876665433 5789999988 55555544431 12 33445544
Q ss_pred CCCcEEEEECCCCeeeeeeccCCcceE-EEEEecCCCceE-----------EeeeeEEEEcCCCCEEEEEeCCC-cEEEE
Q psy10942 373 ADGLLKLWSIKTSTCVSTFDKHALKIW-TLAITKDENQII-----------TGGVWFVNFSPLDRILISSSGDA-TIKLW 439 (537)
Q Consensus 373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~-----------~~~i~~~~~s~~~~~l~~~~~dg-~i~i~ 439 (537)
.++.|.+||+.+++....+..|..... ...+.+++..+. ...+..++|+||++.|+++..++ .+..+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 578899999998887666654321100 012222332211 12468899999999998887766 45444
Q ss_pred ECC---Cc-----eeee--EeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC-ccceeccCCCCCC
Q psy10942 440 CLT---DY-----VCLK--SLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH-ALKIRNSDSENDH 508 (537)
Q Consensus 440 d~~---~~-----~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-~~~i~~~~~~~~~ 508 (537)
+.. .+ +... ...++......++++++|.++++...++.|.+||..+++........ ....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p--------- 293 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWT--------- 293 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCE---------
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecC---------
Confidence 432 11 0001 12234445678999999999999888999999998667654333221 2233
Q ss_pred ccccccceeeecCCCEEEEEeCCC
Q psy10942 509 KGFGLPRQLCSRNSDCEYRGGWSP 532 (537)
Q Consensus 509 ~~~~~~~~~~s~~~~~l~s~~~dg 532 (537)
.++ +|.++++++++.+..+
T Consensus 294 --~~v---a~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 294 --DSF---NFGSDGYLYFDCNQLH 312 (343)
T ss_dssp --EEE---EECTTSCEEEEECCGG
T ss_pred --Cee---EECCCCcEEEEeCccc
Confidence 677 9999999888876443
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=1.3e-09 Score=99.10 Aligned_cols=243 Identities=10% Similarity=-0.002 Sum_probs=143.0
Q ss_pred ceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCC
Q psy10942 98 PLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGG 176 (537)
Q Consensus 98 ~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 176 (537)
-.....|+|+++ ++++...++.|..||..+ .+. ..+. ....+.+++++ ++++ ++++.. ..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~-----------~~~-~~~~-~~~~~~~i~~~-~dG~-l~v~~~-~~--- 74 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFT-----------KQV-QRVT-MDAPVSSVALR-QSGG-YVATIG-TK--- 74 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTT-----------CCE-EEEE-CSSCEEEEEEB-TTSS-EEEEET-TE---
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCC-----------CcE-EEEe-CCCceEEEEEC-CCCC-EEEEEC-Ce---
Confidence 456788999654 555656678999999987 332 2222 34568889998 5666 555543 33
Q ss_pred cccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceec
Q psy10942 177 DLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEE 255 (537)
Q Consensus 177 ~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~ 255 (537)
| .+||. .+++.. +........ ...+..+ +++|+|+++++........
T Consensus 75 -l-----------------~~~d~-------~~g~~~~~~~~~~~~~--~~~~~di---~~d~dG~l~~~~~~~~~~~-- 122 (297)
T 3g4e_A 75 -F-----------------CALNW-------KEQSAVVLATVDNDKK--NNRFNDG---KVDPAGRYFAGTMAEETAP-- 122 (297)
T ss_dssp -E-----------------EEEET-------TTTEEEEEEECCTTCS--SEEEEEE---EECTTSCEEEEEEECCSBT--
T ss_pred -E-----------------EEEEC-------CCCcEEEEEecCCCCC--CCCCCCE---EECCCCCEEEecCCccccc--
Confidence 6 66776 555443 220000011 3457888 8999998666433221110
Q ss_pred cccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE
Q psy10942 256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL 335 (537)
Q Consensus 256 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 335 (537)
..... ..+.|..++... + ... ...+....+.++|+|+++.|
T Consensus 123 -~~~~~-------------------------------~~~~l~~~d~~g-~-~~~-----~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 123 -AVLER-------------------------------HQGALYSLFPDH-H-VKK-----YFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp -TBCCT-------------------------------TCEEEEEECTTS-C-EEE-----EEEEESBEEEEEECTTSCEE
T ss_pred -ccccC-------------------------------CCcEEEEEECCC-C-EEE-----EeeccccccceEEcCCCCEE
Confidence 00000 012233333221 1 110 11122345789999999877
Q ss_pred EEE-eCCCcEEEEEcc-CCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEe
Q psy10942 336 ASG-SLDKTVKVWSTT-GGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG 413 (537)
Q Consensus 336 ~~~-~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 413 (537)
+.+ +.++.|.+|++. ..+..... +....+.....
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~---------------------------~~~~~~~~~~~----------------- 199 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNR---------------------------RSVYKLEKEEQ----------------- 199 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEE---------------------------EEEEECCGGGC-----------------
T ss_pred EEecCCCCcEEEEeccCCCCcccCc---------------------------EEEEECCCCCC-----------------
Confidence 554 456889999874 12221100 00000100000
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEe-cCCCEEEEEeC
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFI-NKGTQIVSTGA 474 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~ 474 (537)
....++++++|++.++...++.|..||..+++.+..+..+...+++++|. |+++.|+.++.
T Consensus 200 ~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 200 IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 45678899999888888778899999999899999988777789999998 88887765553
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=1.2e-09 Score=103.80 Aligned_cols=253 Identities=6% Similarity=-0.017 Sum_probs=147.0
Q ss_pred eeeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccc--eEEe
Q psy10942 4 CVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKS--LLHY 81 (537)
Q Consensus 4 ~V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~ 81 (537)
....|+|+ ++++++++...++.|+.||.++++............ + .+.| ++..++++..++ .|.+
T Consensus 132 ~P~~la~d--~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-i--a~~~--------~g~~l~~~d~~~~~~I~~ 198 (409)
T 3hrp_A 132 YMWGIAAV--GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-P--AVTK--------DKQRVYSIGWEGTHTVYV 198 (409)
T ss_dssp CEEEEEEC--STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-C--EECT--------TSSEEEEEBSSTTCEEEE
T ss_pred CceEEEEe--CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-e--eEec--------CCCcEEEEecCCCceEEE
Confidence 35688898 888888888888999999999887666554433333 4 5567 445666665544 7888
Q ss_pred eeccceehhhhc----C-CCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEE----eecchhhh
Q psy10942 82 YETSAVKELYQH----G-LSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQ----FVGFSDEI 152 (537)
Q Consensus 82 wd~~~~~~~~~~----~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~v 152 (537)
++..++.....+ . ....+.+++++|++..|+++..++.|+.||..++ ..... ..++...-
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~-----------~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ-----------EVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC-----------CEEEEEECCCCSCCCCS
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC-----------CEEEEecccccCCCCCC
Confidence 888765543333 2 2356888999995555555777888999999872 22111 11222222
Q ss_pred -h-hhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc-cc---------
Q psy10942 153 -L-DIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE-RL--------- 220 (537)
Q Consensus 153 -~-~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~-~~--------- 220 (537)
. .++|+ +++..|+++.... +.| +.|+. ......+.... ..
T Consensus 268 P~~~ia~~-p~~g~lyv~d~~~---~~I-----------------~~~~~-------~g~~~~~~g~~~~~g~~dg~~~~ 319 (409)
T 3hrp_A 268 PGPYLIYY-FVDSNFYMSDQNL---SSV-----------------YKITP-------DGECEWFCGSATQKTVQDGLREE 319 (409)
T ss_dssp SCCEEEEE-TTTTEEEEEETTT---TEE-----------------EEECT-------TCCEEEEEECTTCCSCBCEEGGG
T ss_pred ccccEEEe-CCCCEEEEEeCCC---CEE-----------------EEEec-------CCCEEEEEeCCCCCCcCCCcccc
Confidence 3 88999 5444554443221 226 55554 22111121000 00
Q ss_pred cCCCcCeEEEEeccCcccCCCeeeecc-CCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEE
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPRQS-MEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKV 299 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~~~-~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i 299 (537)
.. -.....+ +++|+|+++++-. .++.|+ .|+..++. +..+.++.. ..+.
T Consensus 320 ~~--~~~P~gi---a~d~dG~lyvad~~~~~~I~--~~~~~~G~----------v~~~~g~~~----------~~g~--- 369 (409)
T 3hrp_A 320 AL--FAQPNGM---TVDEDGNFYIVDGFKGYCLR--KLDILDGY----------VSTVAGQVD----------VASQ--- 369 (409)
T ss_dssp CB--CSSEEEE---EECTTCCEEEEETTTTCEEE--EEETTTTE----------EEEEEECTT----------CBSC---
T ss_pred cE--eCCCeEE---EEeCCCCEEEEeCCCCCEEE--EEECCCCE----------EEEEeCCCC----------CCCc---
Confidence 11 1346788 8999998777777 778888 88755421 111111100 0000
Q ss_pred EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~ 349 (537)
..+. .....-.....++++|++.++++-..++.|+.+++
T Consensus 370 ---~~g~--------~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 370 ---IDGT--------PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ---CCBS--------TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ---CCCC--------hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 0000 00111245789999999888888778888887765
No 224
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.16 E-value=5.9e-10 Score=103.25 Aligned_cols=159 Identities=9% Similarity=0.004 Sum_probs=111.0
Q ss_pred eEEEEEeCCCeEEEEECCCCceeee-----eecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEE
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLN-----VLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR 360 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 360 (537)
.++++|+.+ .+.+|+++....... ........+.. |..++| |+++|+++ .++.|++||+.... ......
T Consensus 50 gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~-~~~~~~ 123 (388)
T 1xip_A 50 SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS-EFRTVT 123 (388)
T ss_dssp TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT-CEEEEE
T ss_pred CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh-ccCccc
Confidence 467778776 555698654331000 00111223556 999999 89999999 88999999987432 221111
Q ss_pred ec--------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942 361 GH--------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG 432 (537)
Q Consensus 361 ~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (537)
.+ .-...+++++.||.+.+||+.++.... . ...+.+++|||+| ++.|..
T Consensus 124 ~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~-----------------~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 124 SFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----L-----------------AQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp ECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----E-----------------EESEEEEEECSSE--EEEEET
T ss_pred eeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----c-----------------cCCceEEEEcCCc--eEEEEc
Confidence 11 112238889999999999999876542 1 1178999999999 778999
Q ss_pred CCcEEEEECCCcee--eeEe------e---cCCcceEEEEEecCCCEEEEEe
Q psy10942 433 DATIKLWCLTDYVC--LKSL------E---GHDASVLRCHFINKGTQIVSTG 473 (537)
Q Consensus 433 dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~s~~ 473 (537)
||.+++|+...++. ..++ . +|...|.++.|.+++.++++-.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999998887765 5555 2 3678899999999999888643
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.15 E-value=4.9e-09 Score=107.21 Aligned_cols=231 Identities=10% Similarity=-0.029 Sum_probs=133.7
Q ss_pred cCCCcCeEEEEeccCcccCCCeeee-----ccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCC-
Q psy10942 221 GRDELKTVTLLERGKTVKEEDLFPR-----QSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLD- 294 (537)
Q Consensus 221 ~h~~~~~v~~~~~~~~s~~~~~l~~-----~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d- 294 (537)
+| ...+..+ +|||||++||. |+....|+ +||+.++................+. ++ +.|+.++.+
T Consensus 126 ~~--~~~l~~~---~~SpDg~~lAy~~~~~G~~~~~i~--v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg--~~l~y~~~~~ 195 (693)
T 3iuj_A 126 DG--TTALDQL---SFSRDGRILAYSLSLAGSDWREIH--LMDVESKQPLETPLKDVKFSGISWL-GN--EGFFYSSYDK 195 (693)
T ss_dssp TS--CCEEEEE---EECTTSSEEEEEEECSSCCEEEEE--EEETTTCSEEEEEEEEEESCCCEEE-TT--TEEEEEESSC
T ss_pred CC--cEEEEEE---EECCCCCEEEEEEecCCCceEEEE--EEECCCCCCCccccCCceeccEEEe-CC--CEEEEEEecC
Confidence 45 6678888 99999999983 44446789 9999886422111000000112222 21 345555554
Q ss_pred ------------CeEEEEECCCCceeeeeecccccc-cCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEccCCceeeE
Q psy10942 295 ------------KTVKVWSTTGGLKLLNVLRGHKKG-HEKDINCVTVSPNDKLLASGSL----DKTVKVWSTTGGLKLLN 357 (537)
Q Consensus 295 ------------~~i~i~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----d~~i~i~d~~~~~~~~~ 357 (537)
..|++|++.+....... ...... |......+.|+|||++|+.... ++.|+++|+........
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~-v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRL-VFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEE-EESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred cccccccccCCCcEEEEEECCCCcccceE-EEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 34999998876532111 222233 4556788999999998866442 23677777663222222
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C---C
Q psy10942 358 VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G---D 433 (537)
Q Consensus 358 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~---d 433 (537)
.+..+.+ ..... +++++..|+..+ . .
T Consensus 275 ~l~~~~~-------------------------------------------------~~~~~-~~~~g~~l~~~t~~~~~~ 304 (693)
T 3iuj_A 275 TVQGDLD-------------------------------------------------ADVSL-VDNKGSTLYLLTNRDAPN 304 (693)
T ss_dssp EEECSSS-------------------------------------------------SCEEE-EEEETTEEEEEECTTCTT
T ss_pred EEeCCCC-------------------------------------------------ceEEE-EeccCCEEEEEECCCCCC
Confidence 2222211 11111 344444444333 2 3
Q ss_pred CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCCC---cEEEEECCCCeeEEEec-CCccceeccCCCCC
Q psy10942 434 ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGADG---LLKLWSIKTSTCVSTFD-KHALKIRNSDSEND 507 (537)
Q Consensus 434 g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~ 507 (537)
+.|..+|+.++.. ...+..|...+. .|++++++|+....++ .|++|++..+. ...+. .....+
T Consensus 305 ~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~-------- 373 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSV-------- 373 (693)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEE--------
T ss_pred CEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceE--------
Confidence 6799999987654 345666666665 8999999888766543 68999987544 44443 233445
Q ss_pred CccccccceeeecCCCEEEEEe
Q psy10942 508 HKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 508 ~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
..+ .++++++.|+...
T Consensus 374 ---~~~---~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 374 ---SGF---NGKHDDPALYFGF 389 (693)
T ss_dssp ---EEC---CCCTTCSCEEEEE
T ss_pred ---Eee---ecCCCCCEEEEEe
Confidence 566 7788887666543
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=1.6e-08 Score=95.43 Aligned_cols=293 Identities=9% Similarity=-0.021 Sum_probs=170.6
Q ss_pred EEEEeCccceEEeeeccceehhhhcCCC----------cceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccc
Q psy10942 69 FVLAGGEKSLLHYYETSAVKELYQHGLS----------SPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKI 138 (537)
Q Consensus 69 ~~~~~~~~~~i~~wd~~~~~~~~~~~~~----------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 138 (537)
.+++++.++.|..+|..+|+.+...... ..+.+ ....++..+++++.++.|..+|..+
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~t----------- 122 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSD----------- 122 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTT-----------
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCC-----------
Confidence 5666677889999999999987665542 22322 2233456777888899999999998
Q ss_pred cceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhcccccccccccc
Q psy10942 139 LKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQKHNTE 218 (537)
Q Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~l~~~~ 218 (537)
++.+................ +..+++++.++. + ..+|. .+++.....
T Consensus 123 G~~~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~----l-----------------~~~d~-------~tG~~~W~~-- 169 (376)
T 3q7m_A 123 GTVAWQTKVAGEALSRPVVS---DGLVLIHTSNGQ----L-----------------QALNE-------ADGAVKWTV-- 169 (376)
T ss_dssp CCEEEEEECSSCCCSCCEEE---TTEEEEECTTSE----E-----------------EEEET-------TTCCEEEEE--
T ss_pred CCEEEEEeCCCceEcCCEEE---CCEEEEEcCCCe----E-----------------EEEEC-------CCCcEEEEE--
Confidence 55555554433222222222 446666665554 6 66676 666655110
Q ss_pred cccCCCcCeEEEEe-ccCcccCCCeeeeccCCCcceeccccccCCCcccccccccccc-----eeeeeeCCcc---eEEE
Q psy10942 219 RLGRDELKTVTLLE-RGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAE-----HGAFYTGGTV---ELLA 289 (537)
Q Consensus 219 ~~~h~~~~~v~~~~-~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v---~~l~ 289 (537)
.. ...+.... .......+..++.+..++.+. .++..++..........+.. .+.......+ ..++
T Consensus 170 --~~--~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~--~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~ 243 (376)
T 3q7m_A 170 --NL--DMPSLSLRGESAPTTAFGAAVVGGDNGRVS--AVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF 243 (376)
T ss_dssp --EC--CC-----CCCCCCEEETTEEEECCTTTEEE--EEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE
T ss_pred --eC--CCCceeecCCCCcEEECCEEEEEcCCCEEE--EEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE
Confidence 11 11111000 001111245677777788888 88887754333221110000 0000000000 4677
Q ss_pred EEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecC------
Q psy10942 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK------ 363 (537)
Q Consensus 290 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------ 363 (537)
.++.++.+..+|..+++...... ......+.. ++..++.++.++.+..+|.. .++.+-......
T Consensus 244 ~~~~~g~l~~~d~~tG~~~w~~~-------~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 244 ALAYNGNLTALDLRSGQIMWKRE-------LGSVNDFIV--DGNRIYLVDQNDRVMALTID-GGVTLWTQSDLLHRLLTS 313 (376)
T ss_dssp EECTTSCEEEEETTTCCEEEEEC-------CCCEEEEEE--ETTEEEEEETTCCEEEEETT-TCCEEEEECTTTTSCCCC
T ss_pred EEecCcEEEEEECCCCcEEeecc-------CCCCCCceE--ECCEEEEEcCCCeEEEEECC-CCcEEEeecccCCCcccC
Confidence 78889999999999887654321 122344444 36678888889999999998 444443333111
Q ss_pred ---CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy10942 364 ---KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWC 440 (537)
Q Consensus 364 ---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (537)
.+..++.++.+|.+..+|..+++.+..+......+. ..... .+..|+.++.+|.|..|+
T Consensus 314 ~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~----------------~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 314 PVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQ----------------TEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBC----------------SCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcce----------------eCCEE--ECCEEEEEeCCCEEEEEe
Confidence 157788899999999999999988776654222111 00111 245678888999999886
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.14 E-value=2.3e-11 Score=114.15 Aligned_cols=179 Identities=12% Similarity=0.042 Sum_probs=106.3
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec---
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH--- 362 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--- 362 (537)
..+++++.|+.|+.||..+++..... .. +.+.+..+.+++..+++++.|+.|+.||.. .++.+.....+
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~-----~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~-tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTL-----KE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK-NNEGLTKLPFTIPE 81 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEE-----EC--CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCCHHH
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEe-----cC--CCceecceEcCCCEEEEeCCCCEEEEEECC-CCceeeeeeccCcc
Confidence 47888999999999999999876544 11 234444455677788888899999999997 33332222111
Q ss_pred -----C---CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCC
Q psy10942 363 -----K---KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDA 434 (537)
Q Consensus 363 -----~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (537)
+ .+..+++++.++.++.||..+++.+..+..+.. ..++|++..+++++.|+
T Consensus 82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---------------------~~~~p~~~~v~~~~~dg 140 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---------------------DSLSPSTSLLYLGRTEY 140 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC-------------------------------------------EEEEEEEE
T ss_pred ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---------------------ccccccCCEEEEEecCC
Confidence 1 355677888899999999999998877654421 22455778888999999
Q ss_pred cEEEEECCCceeeeEeecCCcceEEEEEecCC---CEEEEEeCCCcEEEEECCCCeeEEEecCC
Q psy10942 435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKG---TQIVSTGADGLLKLWSIKTSTCVSTFDKH 495 (537)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 495 (537)
.|+.||..+++.+..+..+. .....++++. ..+++++.||.|+.||..+|+.+..+...
T Consensus 141 ~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 141 TITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp EEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS
T ss_pred EEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 99999999998877765321 2223334432 46777889999999999999998877643
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.13 E-value=1.1e-09 Score=111.89 Aligned_cols=69 Identities=7% Similarity=-0.063 Sum_probs=47.4
Q ss_pred EEcCCCCEEEEEeCCC---cEEEEECCCceeeeEee-cCCcceEEEEEecCCCEEEEEeCC----CcEEEEECCCCee
Q psy10942 419 NFSPLDRILISSSGDA---TIKLWCLTDYVCLKSLE-GHDASVLRCHFINKGTQIVSTGAD----GLLKLWSIKTSTC 488 (537)
Q Consensus 419 ~~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~~~~ 488 (537)
.|+++++.|+....++ .|++|++..+. ...+. ...+.+..+.++++++.|+....+ +.++.||+.+++.
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 6777777777665443 68899987544 34443 244567778888888776655444 7899999987764
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.11 E-value=5.6e-09 Score=95.32 Aligned_cols=246 Identities=11% Similarity=0.020 Sum_probs=140.5
Q ss_pred cceEEEEEecccc-EEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeec-ccc
Q psy10942 97 SPLVRIVRSSVKR-MYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNE-YLN 174 (537)
Q Consensus 97 ~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~ 174 (537)
......+|+|+|+ ++++...++.|..|+... + ...+..+...+..++++ ++++ ++++... ..
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g------------~-~~~~~~~~~~~~gl~~d-~dG~-l~v~~~~~~~- 108 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG------------T-VDVLLDATAFTNGNAVD-AQQR-LVHCEHGRRA- 108 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETTS------------C-EEEEEESCSCEEEEEEC-TTSC-EEEEETTTTE-
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCCC------------C-EEEEeCCCCccceeeEC-CCCC-EEEEECCCCE-
Confidence 5678899999998 556666778899998743 2 23444455667889998 5665 4444432 33
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcce
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTL 253 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~ 253 (537)
| .+|+. . ++.. +.. ...+.. ...+..+ ++.|+|+++++-..-|...
T Consensus 109 ---v-----------------~~~~~-------~-g~~~~~~~-~~~~~~-~~~~~~i---~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 109 ---I-----------------TRSDA-------D-GQAHLLVG-RYAGKR-LNSPNDL---IVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp ---E-----------------EEECT-------T-SCEEEEEC-EETTEE-CSCCCCE---EECTTSCEEEECCSGGGSC
T ss_pred ---E-----------------EEECC-------C-CCEEEEEe-ccCCCc-cCCCCCE---EECCCCCEEEeCcCCCccc
Confidence 6 55554 3 2222 210 000110 2345667 8889988777632212221
Q ss_pred eccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCC
Q psy10942 254 EELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK 333 (537)
Q Consensus 254 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 333 (537)
-++-.... . ....+.|..+|..+++... +. .......++|+||++
T Consensus 156 --~~~~~~~~--~------------------------~~~~~~v~~~d~~~g~~~~------~~-~~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 156 --PSQGCPAD--P------------------------ELAHHSVYRLPPDGSPLQR------MA-DLDHPNGLAFSPDEQ 200 (305)
T ss_dssp --GGGSCCCC--C------------------------SSSCEEEEEECSSSCCCEE------EE-EESSEEEEEECTTSS
T ss_pred --cccccccc--c------------------------ccCCCeEEEEcCCCCcEEE------Ee-cCCCCcceEEcCCCC
Confidence 11110000 0 0001346666665544211 11 223467899999999
Q ss_pred EEEEEeCC------CcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCC
Q psy10942 334 LLASGSLD------KTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407 (537)
Q Consensus 334 ~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 407 (537)
.|+.+... +.|.+|++... . +...... .+. ...
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~-~-l~~~~~~-----------------~~~-----------~~~----------- 239 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDG-A-LHDRRHF-----------------ASV-----------PDG----------- 239 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETT-E-EEEEEEE-----------------ECC-----------SSS-----------
T ss_pred EEEEEecCCcCCCCCEEEEEEecCC-C-ccCCeEE-----------------EEC-----------CCC-----------
Confidence 88887665 67888887732 2 1110000 000 000
Q ss_pred CceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCc
Q psy10942 408 NQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL 477 (537)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 477 (537)
....++++++|++.++ ..+ .|.+|+. +++.+..+..+. .+.+++|+++++.|+.++.++.
T Consensus 240 ------~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 240 ------LPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp ------CCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred ------CCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 2344778899985544 444 5999997 567777777554 5889999999988888877653
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.02 E-value=3.1e-09 Score=98.24 Aligned_cols=127 Identities=7% Similarity=-0.069 Sum_probs=82.5
Q ss_pred cCCCCEEEEEcCCCcEEEEECCCCe--eeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-------
Q psy10942 362 HKKGTQIVSTGADGLLKLWSIKTST--CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG------- 432 (537)
Q Consensus 362 ~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------- 432 (537)
.+++..++..+. +.+.+.|..... .+..+...........+.|. +...++++||++.++++..
T Consensus 219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~-------g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSA-------GFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC-------SSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccC-------cceeeEEcCCCCEEEEEeccccCccc
Confidence 344455555555 899999986542 22222211000000001111 2223679999888876543
Q ss_pred --CCcEEEEECCCceeeeEeecCCcceEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeeEEEecCCcc
Q psy10942 433 --DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT-QIVSTG-ADGLLKLWSIKTSTCVSTFDKHAL 497 (537)
Q Consensus 433 --dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~ 497 (537)
++.+.++|+.+++.+..+.... ....++|+||++ ++++.. .++.|.++|+.+++.+..+.....
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~ 358 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred ccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC
Confidence 2356799999999998887543 578999999998 556666 589999999999999999876544
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=6.4e-08 Score=89.82 Aligned_cols=222 Identities=11% Similarity=0.079 Sum_probs=137.4
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccc-----c-c-cCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEccCC
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK-----K-G-HEKDINCVTVSPNDKLLASGSLD------KTVKVWSTTGG 352 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-----~-~-~~~~v~~~~~s~~~~~l~~~~~d------~~i~i~d~~~~ 352 (537)
.+++.+..++.|.++|+.+.....++ .... . . ....-..+..+|+| +++++..+ +.+.++|.. +
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~-~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~-T 173 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKI-IKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY-S 173 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEE-EEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT-T
T ss_pred EEEEccCCCCeEEEEECCCCCCCcee-eeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC-C
Confidence 46777888899999998754211111 1111 0 1 11234567889999 77766555 789999988 5
Q ss_pred ceeeEEEE-------------ecCCCCEEEEEc-------------------CCCcEEEEECCCCeeeeeeccCCcceEE
Q psy10942 353 LKLLNVLR-------------GHKKGTQIVSTG-------------------ADGLLKLWSIKTSTCVSTFDKHALKIWT 400 (537)
Q Consensus 353 ~~~~~~~~-------------~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 400 (537)
.+.+..+. .+++++.+++.. .+.+|.+||+.+++.+.++.......
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~-- 251 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR-- 251 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE--
T ss_pred CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC--
Confidence 66665554 245577777774 37899999999988777765431100
Q ss_pred EEEecCCCceEEeeeeEEEE--cCCCCEEEEEeC------CCcEEEEECCCcee--eeEe--ecC---------------
Q psy10942 401 LAITKDENQIITGGVWFVNF--SPLDRILISSSG------DATIKLWCLTDYVC--LKSL--EGH--------------- 453 (537)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~------dg~i~i~d~~~~~~--~~~~--~~~--------------- 453 (537)
....+.| +|+++++.++.. +++|.+|....++. ...+ ...
T Consensus 252 -------------~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 252 -------------MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp -------------EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred -------------ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence 3334444 888888887764 56777765544321 1111 100
Q ss_pred -CcceEEEEEecCCCEEEEEeC-CCcEEEEECCC---CeeEEEecCCccceeccC----CCCCCccccccceeeecCCCE
Q psy10942 454 -DASVLRCHFINKGTQIVSTGA-DGLLKLWSIKT---STCVSTFDKHALKIRNSD----SENDHKGFGLPRQLCSRNSDC 524 (537)
Q Consensus 454 -~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~---~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~s~~~~~ 524 (537)
......+.+|+||++|+++.. .+.|.+||+.. .+++..+..... +...+ ......+..+ +++|||++
T Consensus 319 ~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~-~~~~~~~~G~~~~ggPr~~---~lSpDGk~ 394 (462)
T 2ece_A 319 VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGI-FHRADHPAGHKLTGAPQML---EISRDGRR 394 (462)
T ss_dssp ECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTT-TTCBCCTTSCCCCSCCCCE---EECTTSSE
T ss_pred CCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCe-eccccccccccCCCCCCEE---EEcCCCCE
Confidence 234688999999999988775 68899999853 355544432200 00000 0001123677 99999999
Q ss_pred EEEEe
Q psy10942 525 EYRGG 529 (537)
Q Consensus 525 l~s~~ 529 (537)
|+++.
T Consensus 395 LyVaN 399 (462)
T 2ece_A 395 VYVTN 399 (462)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99887
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.00 E-value=1.7e-07 Score=81.72 Aligned_cols=190 Identities=14% Similarity=0.131 Sum_probs=124.9
Q ss_pred CeEEEEEcCCCCEEEEEeC--CCcEEEEEccCCceeeEEEEecC----------CCCEEEEEcCCCcEEEEECCCCeeee
Q psy10942 322 DINCVTVSPNDKLLASGSL--DKTVKVWSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKLWSIKTSTCVS 389 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~----------~~~~l~~~~~d~~i~i~d~~~~~~~~ 389 (537)
....++|+|++.++++.+. ++.|+++|+. .++.+..+.... .+...++...++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~-tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQ-TGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECC-CCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE
Confidence 3689999998754444443 5799999999 666766665322 13444555668999999999999888
Q ss_pred eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-----cceEEEEEec
Q psy10942 390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-----ASVLRCHFIN 464 (537)
Q Consensus 390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~s~ 464 (537)
++... . |. + ..+++|++.++++..++.|.++|..+.+.+..+.-.. ..++.+.|.
T Consensus 101 ~i~~g-~--------~~-------g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 101 NFTHQ-M--------KD-------G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EEECC-S--------SS-------C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEECC-C--------CC-------e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 77533 1 11 1 2244567767777778999999999988887776321 136788888
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEecCCcccee--ccCCCCCCccccccceeeecCCCEEEEEe-CCCCEE
Q psy10942 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIR--NSDSENDHKGFGLPRQLCSRNSDCEYRGG-WSPQVV 535 (537)
Q Consensus 465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~i~ 535 (537)
++...+....++.|.+.|..+++.+..+......-. .........+..+ +|+|+++.|++++ ..+.+.
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGI---a~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGI---AWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEE---EEETTTTEEEEEETTCSEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEE---EEcCCCCEEEEECCCCCeEE
Confidence 775555555678999999999999988864210000 0000000112566 9999998776655 444443
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.00 E-value=8.4e-08 Score=82.39 Aligned_cols=183 Identities=13% Similarity=0.137 Sum_probs=124.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEEEecCC---------CCE-EEEEcCCCcEEEEECCCCeeee
Q psy10942 322 DINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVLRGHKK---------GTQ-IVSTGADGLLKLWSIKTSTCVS 389 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~---------~~~-l~~~~~d~~i~i~d~~~~~~~~ 389 (537)
....+.|+ ++.++.+.+.+| .|+.+|+. +++.+..+...+. ++. .+....++.+.+||..+.+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~-Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIE-SGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECC-CCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 35889998 676667776665 89999999 6777766654432 333 4444568899999999999988
Q ss_pred eeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--C---cceEEEEEec
Q psy10942 390 TFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--D---ASVLRCHFIN 464 (537)
Q Consensus 390 ~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~~~~~s~ 464 (537)
++..... + ..+++|++.|+....++.|.++|..+.+.+..+... . ..++.+.|.
T Consensus 122 ti~~~~e-----------------G---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 122 SFNYDGE-----------------G---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp EEECSSC-----------------C---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEECCCC-----------------c---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 8765321 1 123356666777666788999999998888877642 1 234567887
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceecc-CCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNS-DSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 465 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
+|+..+..-.++.|.+.|.++|+.+..+....-.-... ........+.+ +++|+++.|++.+.
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGI---A~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGI---AWDKEHHRLFVTGK 244 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEE---EEETTTTEEEEEET
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEE---EEcCCCCEEEEECC
Confidence 67655555568899999999999998886532110000 00011122556 99999998887764
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=8.6e-08 Score=97.13 Aligned_cols=226 Identities=8% Similarity=0.043 Sum_probs=143.2
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE-EEEcCCCCEEEEEeC------CCcEEEEEccCCceeeEE
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC-VTVSPNDKLLASGSL------DKTVKVWSTTGGLKLLNV 358 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~ 358 (537)
..++.++.|+.|..+|..+++................+.+ ..+ .+..+++++. ++.|+.+|.. +++.+-.
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~-tG~~~W~ 205 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAE-TGERKWR 205 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETT-TCCEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECC-CCcEEEE
Confidence 5788889999999999999987665421100000011111 111 2345555543 6899999988 4444433
Q ss_pred EEe------------------------------------------cCCCCEEEEEcCCC-------------------cE
Q psy10942 359 LRG------------------------------------------HKKGTQIVSTGADG-------------------LL 377 (537)
Q Consensus 359 ~~~------------------------------------------~~~~~~l~~~~~d~-------------------~i 377 (537)
+.. .+++..++.+..++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 321 22355666666553 48
Q ss_pred EEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCC---CEEEEEeCCCcEEEEECCCceeeeEeecCC
Q psy10942 378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLD---RILISSSGDATIKLWCLTDYVCLKSLEGHD 454 (537)
Q Consensus 378 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 454 (537)
..+|..+++.+..++......+.... +. ...-+....+| +.++.++.+|.++++|..+++.+..++...
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~-~~-------~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTS-TQ-------PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCC-CS-------CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred EEEECCCCCEEEEEecCCCccccccc-CC-------CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 89999999988776542211110000 00 11112233466 678899999999999999999887765221
Q ss_pred c-----------ce------------------------EEEEEecCCCEEEEEeC-------------------------
Q psy10942 455 A-----------SV------------------------LRCHFINKGTQIVSTGA------------------------- 474 (537)
Q Consensus 455 ~-----------~v------------------------~~~~~s~~~~~l~s~~~------------------------- 474 (537)
. ++ ..++++|++.++++...
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 437 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG 437 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence 0 01 15789999888877543
Q ss_pred ------------------CCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942 475 ------------------DGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 475 ------------------dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v 536 (537)
.|.|..||+.+++.+..+... .+. .+. .++.++.+++.++.||.+++
T Consensus 438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~-----------~~g---~~~~~g~~v~~g~~dg~l~a 502 (677)
T 1kb0_A 438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPW-----------NGG---TLTTAGNVVFQGTADGRLVA 502 (677)
T ss_dssp GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSC-----------CCC---EEEETTTEEEEECTTSEEEE
T ss_pred cccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCC-----------cCc---ceEeCCCEEEEECCCCcEEE
Confidence 277999999999998887643 234 455 67888999999999999887
Q ss_pred C
Q psy10942 537 Y 537 (537)
Q Consensus 537 W 537 (537)
|
T Consensus 503 ~ 503 (677)
T 1kb0_A 503 Y 503 (677)
T ss_dssp E
T ss_pred E
Confidence 5
No 235
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.95 E-value=1.6e-05 Score=82.62 Aligned_cols=426 Identities=10% Similarity=-0.000 Sum_probs=216.8
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeee-c--ccc-----ccceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSY-P--AYE-----SLETCAVFHLSDETESKSGGKTFVLAGGEK 76 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~-~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (537)
|++|... .++..|..+..++-+..||.++++..... . ... .+..+ ..... ....+..++.+
T Consensus 68 I~~i~~d--~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i--~~d~~-------~~g~lwi~t~~ 136 (781)
T 3v9f_A 68 LNEVYTD--PVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHI--TSSVQ-------AGKGLWVCTYY 136 (781)
T ss_dssp EEEEEEC--SSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEE--EECSS-------TTSEEEEEESS
T ss_pred cceEEEc--CCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEE--EecCc-------cCCCEEEEECC
Confidence 6666666 56662555666623999998876643321 1 111 12222 22220 02234445434
Q ss_pred ceEEeeeccceehhhhc------CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec---
Q psy10942 77 SLLHYYETSAVKELYQH------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG--- 147 (537)
Q Consensus 77 ~~i~~wd~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--- 147 (537)
+.|..||..+++..... .....|.++...++|.+.+ ++.++-|..||..+ .+.. .+..
T Consensus 137 ~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~-----------~~~~-~~~~~~~ 203 (781)
T 3v9f_A 137 RGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLND-----------KSVK-HFVHDPQ 203 (781)
T ss_dssp SCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTT-----------TEEE-EECC---
T ss_pred CCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCC-----------CceE-eeecCCC
Confidence 44888887665432211 1124688888888886554 56654588888776 2222 1110
Q ss_pred -----chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccc---
Q psy10942 148 -----FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTE--- 218 (537)
Q Consensus 148 -----~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~--- 218 (537)
....|.++... ..+.|.+++.. . + .+||. .+.... +....
T Consensus 204 ~~~~l~~~~i~~i~~d--~~g~lwigt~~-G----l-----------------~~~d~-------~~~~~~~~~~~~~~~ 252 (781)
T 3v9f_A 204 NPNSLPGNDVRCIYKD--TNGNIWIGTSK-G----L-----------------ALFNA-------NTETFTNFHNNPGNI 252 (781)
T ss_dssp -----CCSSEEEEEEC--TTCCEEEEETT-E----E-----------------EEEET-------TTTEEEC--------
T ss_pred CcccCCCCceeEEEEc--CCCCEEEEeCC-c----H-----------------heECC-------CCCcEEEEEcCCCcc
Confidence 12346666554 24556677654 3 5 44554 333222 11000
Q ss_pred cccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc---------------cccccceeeeeeCC
Q psy10942 219 RLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI---------------FVPEAEHGAFYTGG 283 (537)
Q Consensus 219 ~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~---------------~~~~~~~~~~~~~~ 283 (537)
..-. ...|.++ ...++|.+.+ |+..+-+. +++........... ....+..+.....
T Consensus 253 ~~l~--~~~i~~i---~~d~~g~lWi-gt~~~Gl~--~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~- 323 (781)
T 3v9f_A 253 HGAL--SSYIFSI---KQLKDNKLWI-ATELNGIM--ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSF- 323 (781)
T ss_dssp ---C--CCCEEEE---EECTTSEEEE-EESSSCEE--EEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSS-
T ss_pred cccc--CceEEEE---EECCCCCEEE-EeCCCCeE--EECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCC-
Confidence 0012 4568888 7777776544 55533455 66665432111000 0000001100000
Q ss_pred cceEEEEEeCCCeEEEEECCCCceeeeeecc----cccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce-----
Q psy10942 284 TVELLASGSLDKTVKVWSTTGGLKLLNVLRG----HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK----- 354 (537)
Q Consensus 284 ~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~----- 354 (537)
..+-.|+.++-|..++..+.....-.... ........|.++...++|++ ..|+.++-+..++.. ...
T Consensus 324 --g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~-~~~~~~~~ 399 (781)
T 3v9f_A 324 --NNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENG-KRVAIYNK 399 (781)
T ss_dssp --CCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETT-EEEEECC-
T ss_pred --CCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECC-CCeEEEcc
Confidence 34556666777888887655421110000 01112356999999888765 455655668888865 211
Q ss_pred --------eeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCE
Q psy10942 355 --------LLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRI 426 (537)
Q Consensus 355 --------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 426 (537)
.+..+....++. +..++.++-+..+|..+++....... . +....|.++...+++++
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~-~--------------~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELE-K--------------NELLDVRVFYEDKNKKI 463 (781)
T ss_dssp ----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCST-T--------------TCCCCEEEEEECTTSEE
T ss_pred CCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccC-C--------------CCCCeEEEEEECCCCCE
Confidence 122222333333 44455556677777766643222110 0 00116777888887765
Q ss_pred EEEEeCCCcEEEEECCCceeeeEeecC-----CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCC----cc
Q psy10942 427 LISSSGDATIKLWCLTDYVCLKSLEGH-----DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH----AL 497 (537)
Q Consensus 427 l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~----~~ 497 (537)
.+ |+. +.|..||..+++........ ...|.++...++|.+.+. +.++-+..||..+++.. .+... ..
T Consensus 464 wi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~ 539 (781)
T 3v9f_A 464 WI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVR-KFNQYEGFCSN 539 (781)
T ss_dssp EE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEE-EECTTTTCSCS
T ss_pred EE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEE-EccCCCCCCCC
Confidence 54 445 56889998775543322211 356899999988876654 44344788998766543 33221 12
Q ss_pred ceeccCCCCCCccccccceeeecCCCEEEEEeCCCC
Q psy10942 498 KIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQ 533 (537)
Q Consensus 498 ~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~ 533 (537)
.| .++ ...++|++.++.. +|.
T Consensus 540 ~i-----------~~i---~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 540 TI-----------NQI---YRSSKGQMWLATG-EGL 560 (781)
T ss_dssp CE-----------EEE---EECTTSCEEEEET-TEE
T ss_pred ee-----------EEE---EECCCCCEEEEEC-CCc
Confidence 33 555 7777787665543 444
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.93 E-value=1e-07 Score=88.07 Aligned_cols=202 Identities=17% Similarity=0.041 Sum_probs=131.0
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEec---
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGH--- 362 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--- 362 (537)
..+..++.++.+..+|.. ++..... ......+.++...+++. +..++.++.+..+|.. +. ........
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~-----~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~-~~~~~~~~~~~ 178 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRF-----KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT-EKWRFKTNDAI 178 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEE-----ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC-EEEEEECSSCC
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEE-----cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC-EeEEEecCCCc
Confidence 467778888999999988 5543222 22333456667777776 5567778889999987 33 32222221
Q ss_pred -------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCc
Q psy10942 363 -------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT 435 (537)
Q Consensus 363 -------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (537)
.++. +..++ +.+..+| .+++....+..... .+.++..++++.+ ..++.++.
T Consensus 179 ~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~-----------------~~~~~~~~~~g~l-~v~t~~~g 236 (330)
T 3hxj_A 179 TSAASIGKDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYW-----------------TVTRPAISEDGTI-YVTSLDGH 236 (330)
T ss_dssp CSCCEECTTCC-EEEES--SSEEEEC-TTSCEEEEECCSSC-----------------CCSCCEECTTSCE-EEEETTTE
T ss_pred eeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCc-----------------ceeceEECCCCeE-EEEcCCCe
Confidence 2233 44444 7888888 66666555543322 4566677777754 44566788
Q ss_pred EEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccc
Q psy10942 436 IKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPR 515 (537)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 515 (537)
|..+|. +++.+..+......+..+...+++ .|..++.+|.|..+|. +++.+..+......+ .++
T Consensus 237 l~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~-----------~~~-- 300 (330)
T 3hxj_A 237 LYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWII-----------ATP-- 300 (330)
T ss_dssp EEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCC-----------SCC--
T ss_pred EEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccc-----------cce--
Confidence 888874 566666666544445556666565 5667788888999996 787777766555555 666
Q ss_pred eeeecCCCEEEEEeCCCCEEe
Q psy10942 516 QLCSRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 516 ~~~s~~~~~l~s~~~dg~i~v 536 (537)
...++|++ ..++.+|.+++
T Consensus 301 -~~d~~g~l-~~gt~~G~~~~ 319 (330)
T 3hxj_A 301 -VIDENGTI-YFGTRNGKFYA 319 (330)
T ss_dssp -EECTTCCE-EEECTTSCEEE
T ss_pred -EEcCCCEE-EEEcCCCeEEE
Confidence 77777765 45788888865
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=3.9e-07 Score=87.81 Aligned_cols=229 Identities=12% Similarity=0.026 Sum_probs=138.3
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE-c-CCCCEEEEEeC------------------CCcEE
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV-S-PNDKLLASGSL------------------DKTVK 345 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~~~~~------------------d~~i~ 345 (537)
..++....++.|.+.|+.+.+....+ .+. .......+++ + |+++++++++. ++.+.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii---~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAIL---EIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE---ECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEE---eCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 34555556778999999998754321 111 2235778887 5 99999998852 35788
Q ss_pred EEEccCCceeeEEEEe---------cCCCCEEEEEcCCC---------------cEEEEECCCCeeeeeeccCC---cce
Q psy10942 346 VWSTTGGLKLLNVLRG---------HKKGTQIVSTGADG---------------LLKLWSIKTSTCVSTFDKHA---LKI 398 (537)
Q Consensus 346 i~d~~~~~~~~~~~~~---------~~~~~~l~~~~~d~---------------~i~i~d~~~~~~~~~~~~~~---~~i 398 (537)
+.|.. ..+...++.. .+++.++++.+.+. .+.+.|....+.... .+.. ..|
T Consensus 179 vID~~-t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~-~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDAD-KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA-AGDYQELNGV 256 (595)
T ss_dssp EEETT-TTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH-HTCSEEETTE
T ss_pred EEECC-CCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc-CCCeeEECcE
Confidence 89988 5566555443 34577777766542 345555432110000 0000 112
Q ss_pred EEEEEecC-CCc-eE---E-eeeeEEEEcCCCCEEEEEe-CCCcEEEEECCCce------------eeeEeecCCcceEE
Q psy10942 399 WTLAITKD-ENQ-II---T-GGVWFVNFSPLDRILISSS-GDATIKLWCLTDYV------------CLKSLEGHDASVLR 459 (537)
Q Consensus 399 ~~~~~~~~-~~~-~~---~-~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~v~~ 459 (537)
.-+..... +.. +. . ....++.++|||+++++++ .+.+|.++|+.+.+ ....+.. ......
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcce
Confidence 11111110 111 10 1 1467799999999888776 57899999998753 2334432 234688
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCC----------CeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 460 CHFINKGTQIVSTGADGLLKLWSIKT----------STCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 460 ~~~s~~~~~l~s~~~dg~v~vwd~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
++|+|+|...++.-.|+.|.+||+++ .+.+..+..|..+-... ...++ .++|||++|+++.
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~------~~~g~---t~~~DGk~l~~~N 406 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK------TVMGE---TLDATNDWLVCLS 406 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE------ETTTT---STTCCSSEEEEEE
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce------eccce---EeCCCCCEEEEcC
Confidence 99999994444556699999999977 56777777664421000 00345 7899999999875
Q ss_pred C
Q psy10942 530 W 530 (537)
Q Consensus 530 ~ 530 (537)
.
T Consensus 407 k 407 (595)
T 1fwx_A 407 K 407 (595)
T ss_dssp S
T ss_pred C
Confidence 4
No 238
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=1.3e-05 Score=83.29 Aligned_cols=396 Identities=11% Similarity=0.067 Sum_probs=201.3
Q ss_pred eeeeeeeccC--CcceEEEecCcceEEEEEcCccceeeeecc------ccccceeeeEeecCccccccCCcEEEEEeCcc
Q psy10942 5 VTCFDVIPQI--TSEFSVHCGRDKVLFTWDLSSRKQLRSYPA------YESLETCAVFHLSDETESKSGGKTFVLAGGEK 76 (537)
Q Consensus 5 V~~~~~~~~~--~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (537)
|.++... . ++.+.+....+| |..+|.++++....... ...+..+ ...+ ++. +..++.+
T Consensus 117 i~~i~~d--~~~~g~lwi~t~~~g-l~~~~~~~~~~~~~~~~~~~~l~~~~i~~i--~~d~--------~g~-lwigt~~ 182 (781)
T 3v9f_A 117 VTHITSS--VQAGKGLWVCTYYRG-IEYLDIATGKFTHYNKSTVPALPSEQTWTA--TEAE--------DGK-LYIGHVE 182 (781)
T ss_dssp EEEEEEC--SSTTSEEEEEESSSC-EEEEETTTTEEEEESTTTCTTCSCCCEEEE--EEEE--------TTE-EEEEETT
T ss_pred ceEEEec--CccCCCEEEEECCCC-eeEEECCCCeEEeeccCcccCCCccceEEE--EECC--------CCC-EEEEecC
Confidence 5565555 4 555444332455 88899877654332110 1112222 2223 333 4445545
Q ss_pred ceEEeeeccceehhhhc--------CCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec-
Q psy10942 77 SLLHYYETSAVKELYQH--------GLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG- 147 (537)
Q Consensus 77 ~~i~~wd~~~~~~~~~~--------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~- 147 (537)
+.|..||..+++..... .....|.++...++|.+.+ ++.+ -+.+||..++ +.......
T Consensus 183 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~-----------~~~~~~~~~ 249 (781)
T 3v9f_A 183 GGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTE-----------TFTNFHNNP 249 (781)
T ss_dssp TEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTT-----------EEEC-----
T ss_pred CCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCC-----------cEEEEEcCC
Confidence 45888987765432211 0124689998888887554 4555 5888997762 22111110
Q ss_pred ------chhhhhhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccc----
Q psy10942 148 ------FSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHN---- 216 (537)
Q Consensus 148 ------~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~---- 216 (537)
....|.++... .++.|.+++..+. | .++|. .+.... +..
T Consensus 250 ~~~~~l~~~~i~~i~~d--~~g~lWigt~~~G----l-----------------~~~~~-------~~~~~~~~~~~~f~ 299 (781)
T 3v9f_A 250 GNIHGALSSYIFSIKQL--KDNKLWIATELNG----I-----------------MILDL-------QQNQFLLPEQIRFE 299 (781)
T ss_dssp ------CCCCEEEEEEC--TTSEEEEEESSSC----E-----------------EEEET-------TCC---------CE
T ss_pred CccccccCceEEEEEEC--CCCCEEEEeCCCC----e-----------------EEECC-------CCCeeeeeeccccc
Confidence 12346666654 3455677765332 4 22232 111111 000
Q ss_pred ------cccccCCCcCeEEEEeccCcccCCCeeeeccCCCcceeccccccCCCcccccc----------cccccceeeee
Q psy10942 217 ------TERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGI----------FVPEAEHGAFY 280 (537)
Q Consensus 217 ------~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~----------~~~~~~~~~~~ 280 (537)
....-. ...|.++ ...++|.+- .|+.++-+. .++........... ....+..+...
T Consensus 300 ~~~~~~~~~~l~--~~~v~~i---~~D~~g~lW-igt~~~Gl~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d 371 (781)
T 3v9f_A 300 FIREGDNNYSLS--NASARYI---FQDSFNNIW-IGTWGGGIN--FISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDD 371 (781)
T ss_dssp EECBCSSTTSBS--SSCEEEE---EECSSCCEE-EEEBSSCEE--EECSSCCSCEEEC----CCCSSCCSSSCEEEEEEC
T ss_pred cccCCCCCCCCC--CCeEEEE---EEeCCCCEE-EEecCCeEE--EeCCCCCcceeeccCccccccCCCCCcceEEEEEc
Confidence 000012 5678898 777877644 455455566 66665432111100 00001111111
Q ss_pred eCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC--------
Q psy10942 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG-------- 352 (537)
Q Consensus 281 ~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-------- 352 (537)
.. ..+..|+.++-|..|+..++.... . ..........|.++...+++++.+ |+.++-+..++....
T Consensus 372 ~~---g~lWigt~~~Gl~~~~~~~~~~~~-~-~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~ 445 (781)
T 3v9f_A 372 GQ---GKLWIGTDGGGINVFENGKRVAIY-N-KENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELE 445 (781)
T ss_dssp TT---SCEEEEEBSSCEEEEETTEEEEEC-C------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCST
T ss_pred CC---CCEEEEeCCCcEEEEECCCCeEEE-c-cCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccC
Confidence 11 345566666678888876543211 0 110122346799999888886555 666666888877521
Q ss_pred ---ceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEE
Q psy10942 353 ---LKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS 429 (537)
Q Consensus 353 ---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (537)
...+..+....++. +..++. +-+..+|..+++.......... .+....+.++...++|++.+.
T Consensus 446 ~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~------------~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 446 KNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNS------------QLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp TTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTS------------SCSCSCEEEEEECTTCCEEEE
T ss_pred CCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCccc------------ccccceeEEEEEcCCCCEEEE
Confidence 11233333334444 334444 4577888776543222111100 001126788888888886654
Q ss_pred EeCCCcEEEEECCCceeeeEeec----CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 430 SSGDATIKLWCLTDYVCLKSLEG----HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 430 ~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
+.++.+..||..+++.. .+.. ....|.++...++|.+.++. .+|.+..||..+++.
T Consensus 512 -t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 512 -TFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY 571 (781)
T ss_dssp -ESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC
T ss_pred -EcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE
Confidence 44345788887765433 2321 13468899988888766654 466558898876653
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.91 E-value=4.5e-08 Score=94.20 Aligned_cols=142 Identities=7% Similarity=-0.046 Sum_probs=94.3
Q ss_pred eEEEecCcceEEEEEcCccceeeeeccccccceeee---------E------------------eecCcc---ccccC--
Q psy10942 18 FSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAV---------F------------------HLSDET---ESKSG-- 65 (537)
Q Consensus 18 ~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~---------~------------------~~~~~~---~~~~~-- 65 (537)
-|.|||..|.++|+-+-++++++.+|.+.+-...++ + ..+.+- -..|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 378889999999999999999998885544322100 0 000000 00111
Q ss_pred ---CcEEEE-EeCccceEEeeeccceehhh--hcCCCcceEEEEE-e-ccccEEEEEeC------------------Cce
Q psy10942 66 ---GKTFVL-AGGEKSLLHYYETSAVKELY--QHGLSSPLVRIVR-S-SVKRMYAVVTA------------------DHN 119 (537)
Q Consensus 66 ---~~~~~~-~~~~~~~i~~wd~~~~~~~~--~~~~~~~v~~~~~-s-~~~~~la~~~~------------------d~~ 119 (537)
++++++ +...++.|.+.|+.+.++.. .+.....+..+++ + |++++++++++ ++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 344444 45567789999999998777 4444467889998 5 99999988852 457
Q ss_pred EEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecc
Q psy10942 120 ISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEY 172 (537)
Q Consensus 120 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 172 (537)
+.+.|.++ ++...++.-.. ....++++ ++++++++++.+.
T Consensus 177 vtvID~~t-----------~~v~~qI~Vgg-~pd~~~~s-pdGk~~~vt~~~s 216 (595)
T 1fwx_A 177 FTAVDADK-----------WEVAWQVLVSG-NLDNCDAD-YEGKWAFSTSYNS 216 (595)
T ss_dssp EEEEETTT-----------TEEEEEEEESS-CCCCEEEC-SSSSEEEEEESCT
T ss_pred EEEEECCC-----------CeEEEEEEeCC-CccceEEC-CCCCEEEEEecCc
Confidence 88888888 67777766322 35667777 6777776666544
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.91 E-value=1e-06 Score=74.98 Aligned_cols=184 Identities=14% Similarity=0.068 Sum_probs=124.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC--CcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCee
Q psy10942 320 EKDINCVTVSPNDKLLASGSLD--KTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTC 387 (537)
Q Consensus 320 ~~~v~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~ 387 (537)
......+.|++ +.++.+.+.+ +.|+.+|+. +++.+..+..... +........++.+.+||..+.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~-tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLE-TGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECC-CCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 34577899986 5555665554 489999999 6777776654432 34445556789999999999999
Q ss_pred eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCC-----cceEEEEE
Q psy10942 388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHD-----ASVLRCHF 462 (537)
Q Consensus 388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~ 462 (537)
+.++..... -..++ ++++.|+.+..++.|.++|..+.+.+.+++-.. ..++.+.|
T Consensus 98 ~~ti~~~~~------------------Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 98 RARFRYPGE------------------GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp EEEEECSSC------------------CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EEEEeCCCC------------------ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 988865431 12233 456667777778999999999988888776422 24566777
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccC---CCCCCccccccceeeecCCCEEEEEeC
Q psy10942 463 INKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSD---SENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
. +|+..+..-.+..|.+.|.++|+.+..+....-.- ... .......+.+ +++|+++.|++.+.
T Consensus 158 ~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~-~~~~~~~~~~~vlNGI---A~d~~~~~lfVTGK 223 (243)
T 3mbr_X 158 V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVP-DADALTDSTNDVLNGI---AFDAEHDRLFVTGK 223 (243)
T ss_dssp E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGST-TTTSCCCTTSSCEEEE---EEETTTTEEEEEET
T ss_pred e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcc-ccccccCCcCCceEEE---EEcCCCCEEEEECC
Confidence 6 66655555567899999999999998876431100 000 0011122556 99999888877664
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.91 E-value=6.7e-10 Score=104.12 Aligned_cols=182 Identities=7% Similarity=-0.041 Sum_probs=102.2
Q ss_pred ccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh
Q psy10942 12 PQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY 91 (537)
Q Consensus 12 ~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~ 91 (537)
|.-++..+++++.||.|..||.++|+.+-+++. .++... ...+ ++..+++++.++.|+.||..+|+.+.
T Consensus 5 P~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~--p~~~--------~g~~~v~~s~dg~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 5 VTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQV--PTHV--------EEPAFLPDPNDGSLYTLGSKNNEGLT 73 (369)
T ss_dssp ---CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCC--C-------------CCEEECTTTCCEEEC-----CCSE
T ss_pred CeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceec--ceEc--------CCCEEEEeCCCCEEEEEECCCCceee
Confidence 445778899999999999999999999988776 444333 2233 44567777889999999999998876
Q ss_pred hcCCCc--ceE-EEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEe
Q psy10942 92 QHGLSS--PLV-RIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVA 168 (537)
Q Consensus 92 ~~~~~~--~v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 168 (537)
....+. .+. +..+. ++..|++++.++.|+.||..+ ++.+..+..+. ...++ ++++.++++
T Consensus 74 ~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-----------G~~~w~~~~~~----~~~~~-p~~~~v~~~ 136 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLT-----------GEKQQTLSSAF----ADSLS-PSTSLLYLG 136 (369)
T ss_dssp ECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------------------EEEE
T ss_pred eeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCC-----------CcEEEEecCCC----ccccc-ccCCEEEEE
Confidence 665431 111 11111 345677888899999999998 56665655443 23455 467778888
Q ss_pred eeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCC---Cee
Q psy10942 169 SNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEE---DLF 243 (537)
Q Consensus 169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~---~~l 243 (537)
+.++. + ..||. .+++.. +. .+ ..... .+.++. ..+
T Consensus 137 ~~dg~----v-----------------~a~d~-------~tG~~~W~~~-----~~----~~~~~---~~~~~~~~~~~v 176 (369)
T 2hz6_A 137 RTEYT----I-----------------TMYDT-------KTRELRWNAT-----YF----DYAAS---LPEDDVDYKMSH 176 (369)
T ss_dssp EEEEE----E-----------------ECCCS-------SSSSCCCEEE-----EE----EECCB---CCCCCTTCCCCE
T ss_pred ecCCE----E-----------------EEEEC-------CCCCEEEeEe-----cc----cccCc---cccCCccccceE
Confidence 77766 8 88898 777765 22 11 12233 444432 567
Q ss_pred eeccCCCcceeccccccCCC
Q psy10942 244 PRQSMEPSTLEELEKRKTYH 263 (537)
Q Consensus 244 ~~~~~d~~i~~~iw~~~~~~ 263 (537)
+.++.+|.+. .||..++.
T Consensus 177 ~~~~~dg~v~--a~d~~tG~ 194 (369)
T 2hz6_A 177 FVSNGDGLVV--TVDSESGD 194 (369)
T ss_dssp EEEETSCEEE--EECTTTCC
T ss_pred EEECCCCEEE--EEECCCCc
Confidence 7788899999 99998754
No 242
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.86 E-value=3.2e-06 Score=77.66 Aligned_cols=218 Identities=13% Similarity=-0.036 Sum_probs=127.2
Q ss_pred eEEEEeccCcccCC-CeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942 227 TVTLLERGKTVKEE-DLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG 305 (537)
Q Consensus 227 ~v~~~~~~~~s~~~-~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~ 305 (537)
-..+. .|+|++ .++++...++.|. .|+..++.... .........+.....+ ++++ ++. ..|.+||..++
T Consensus 50 ~~egp---~~~~~~~~l~~~d~~~~~i~--~~d~~~~~~~~-~~~~~~v~~i~~~~dg--~l~v-~~~-~gl~~~d~~~g 119 (326)
T 2ghs_A 50 LGEGP---TFDPASGTAWWFNILERELH--ELHLASGRKTV-HALPFMGSALAKISDS--KQLI-ASD-DGLFLRDTATG 119 (326)
T ss_dssp BEEEE---EEETTTTEEEEEEGGGTEEE--EEETTTTEEEE-EECSSCEEEEEEEETT--EEEE-EET-TEEEEEETTTC
T ss_pred CCcCC---eEeCCCCEEEEEECCCCEEE--EEECCCCcEEE-EECCCcceEEEEeCCC--eEEE-EEC-CCEEEEECCCC
Confidence 34567 889975 4555666678888 88877642111 1011111122222222 2333 443 45999998877
Q ss_pred ceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEccCCceee---------EEEEecCCCCEE-
Q psy10942 306 LKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSL------DKTVKVWSTTGGLKLL---------NVLRGHKKGTQI- 368 (537)
Q Consensus 306 ~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~---------~~~~~~~~~~~l- 368 (537)
+... + ..... .....+.+++++|+|+++++... .+.|..++ . .+.. ..+...++++.+
T Consensus 120 ~~~~-~-~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g~~~~~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 120 VLTL-H-AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K--GKVTKLFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp CEEE-E-ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--TEEEEEEEEESSEEEEEECTTSCEEE
T ss_pred cEEE-E-eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--CcEEEeeCCCcccCCeEEcCCCCEEE
Confidence 6421 1 11111 11245889999999997765532 24455555 2 2222 123345567655
Q ss_pred EEEcCCCcEEEEECC--CC-eee--eeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942 369 VSTGADGLLKLWSIK--TS-TCV--STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD 443 (537)
Q Consensus 369 ~~~~~d~~i~i~d~~--~~-~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (537)
++.+.++.|.+||+. ++ +.. ..+.. +.... +....++++++|+++++...++.|..||. +
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~---------~~~~~-----~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFID---------STGIK-----GGMDGSVCDAEGHIWNARWGEGAVDRYDT-D 259 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEE---------CTTSS-----SEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEE---------CCCCC-----CCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence 445567889999986 44 211 01100 00000 14567889999998887777789999998 5
Q ss_pred ceeeeEeecCCcceEEEEEe-cCCCEEEEEeC
Q psy10942 444 YVCLKSLEGHDASVLRCHFI-NKGTQIVSTGA 474 (537)
Q Consensus 444 ~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~ 474 (537)
++.+..+..+...+++++|+ ++++.|+.++.
T Consensus 260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 77777777777779999999 88877765544
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.86 E-value=1.3e-07 Score=87.36 Aligned_cols=292 Identities=12% Similarity=0.007 Sum_probs=157.8
Q ss_pred cceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC
Q psy10942 16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL 95 (537)
Q Consensus 16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 95 (537)
+..++.++.++.|..|| .+++.+...+....+... +...+ ++ .++.++.+ |..+|. +++.+.....
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~-~~~~~--------~g-~l~v~t~~--l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECR-PSIGK--------DG-TIYFGSDK--VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEEC-CEETT--------TT-EECCSSCE--EEEECC-CGGGGGGSCC
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccc-eEEec--------CC-cEEEecCc--EEEECC-CCcEEEEEEC
Confidence 44677777777799999 888887665533322211 12222 33 35555544 888886 7777776665
Q ss_pred Ccc-eEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeecccc
Q psy10942 96 SSP-LVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLN 174 (537)
Q Consensus 96 ~~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 174 (537)
... .....+. +..|.+++.++.|..+|... +.......+...+.++... + ++.+++++.++.
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g------------~~~~~~~~~~~~~~~~~~~-~-~g~l~vgt~~~~- 158 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTDG------------TEKWRFKTKKAIYATPIVS-E-DGTIYVGSNDNY- 158 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTTS------------CEEEEEECSSCCCSCCEEC-T-TSCEEEECTTSE-
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCCC------------CEEEEEcCCCceeeeeEEc-C-CCEEEEEcCCCE-
Confidence 432 2223333 44577788888899999773 2233333333445555554 2 344666665444
Q ss_pred CCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccccCCCcCeEEEEeccCcccCCCeeeeccCCCcc
Q psy10942 175 GGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEPST 252 (537)
Q Consensus 175 ~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~~~d~~i 252 (537)
+ ..+|. . ++.. .. .. ...+.++ ...+++..++.. +.+
T Consensus 159 ---l-----------------~~~d~-------~-g~~~~~~~-----~~--~~~~~~~---~~d~~g~l~v~t---~~l 197 (330)
T 3hxj_A 159 ---L-----------------YAINP-------D-GTEKWRFK-----TN--DAITSAA---SIGKDGTIYFGS---DKV 197 (330)
T ss_dssp ---E-----------------EEECT-------T-SCEEEEEE-----CS--SCCCSCC---EECTTCCEEEES---SSE
T ss_pred ---E-----------------EEECC-------C-CCEeEEEe-----cC--CCceeee---EEcCCCEEEEEe---CEE
Confidence 6 55555 4 3322 11 12 2233334 344444433322 333
Q ss_pred eeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCC
Q psy10942 253 LEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPND 332 (537)
Q Consensus 253 ~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 332 (537)
. .++ .+++..... ......+.++...++|
T Consensus 198 ~--~~d--------------------------------------------~~g~~~~~~-----~~~~~~~~~~~~~~~g 226 (330)
T 3hxj_A 198 Y--AIN--------------------------------------------PDGTEKWNF-----YAGYWTVTRPAISEDG 226 (330)
T ss_dssp E--EEC--------------------------------------------TTSCEEEEE-----CCSSCCCSCCEECTTS
T ss_pred E--EEC--------------------------------------------CCCcEEEEE-----ccCCcceeceEECCCC
Confidence 3 344 222211111 1112346667777777
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEE
Q psy10942 333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIIT 412 (537)
Q Consensus 333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 412 (537)
. +..++.++.+..+|.. ...+..+.....
T Consensus 227 ~-l~v~t~~~gl~~~~~~--g~~~~~~~~~~~------------------------------------------------ 255 (330)
T 3hxj_A 227 T-IYVTSLDGHLYAINPD--GTEKWRFKTGKR------------------------------------------------ 255 (330)
T ss_dssp C-EEEEETTTEEEEECTT--SCEEEEEECSSC------------------------------------------------
T ss_pred e-EEEEcCCCeEEEECCC--CCEeEEeeCCCC------------------------------------------------
Confidence 5 4556667777777643 222222211100
Q ss_pred eeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
.+..+.+.+++ .|..++.+|.|..+|. +++.+..+......+.++...++++ |..++.+|.+++...+.
T Consensus 256 -~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 256 -IESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp -CCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred -ccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 11122334444 4566777888999995 6777777765556677788777776 56688999999887643
No 244
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.85 E-value=7.4e-07 Score=88.35 Aligned_cols=81 Identities=9% Similarity=0.074 Sum_probs=57.9
Q ss_pred CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCcccc
Q psy10942 433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFG 512 (537)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 512 (537)
+|.|.-||+.+++.+.+..... ++..-.....+.+++.++.|+.++.||.++|+.+..++...... ...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~----------a~P 533 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV----------SPP 533 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SCC
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcc----------cCc
Confidence 6889999999999888876432 22222223346688889999999999999999999887654332 023
Q ss_pred ccceeeecCCCEEEE
Q psy10942 513 LPRQLCSRNSDCEYR 527 (537)
Q Consensus 513 ~~~~~~s~~~~~l~s 527 (537)
+ .+..+|++.++
T Consensus 534 ~---~y~~~G~qYv~ 545 (582)
T 1flg_A 534 I---TWEQDGEQYLG 545 (582)
T ss_dssp E---EEEETTEEEEE
T ss_pred e---EEEECCEEEEE
Confidence 4 77788875443
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.85 E-value=5.8e-07 Score=77.17 Aligned_cols=183 Identities=13% Similarity=0.076 Sum_probs=124.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceeeEEEEecCC----------CCEEEEEcCCCcEEEEECCCCeeeee
Q psy10942 321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWSIKTSTCVST 390 (537)
Q Consensus 321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~~~~ 390 (537)
.....+.|+ ++.++.+.+.+|.|+.+|+. +++.+..+ ..+. +...+....++.+.+||..+.+.+.+
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~-Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLE-SAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSS-CSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECC-CCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 345788887 46677777888899999999 56666555 3322 34555566789999999999999888
Q ss_pred eccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecC--Cc---ceEEEEEecC
Q psy10942 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH--DA---SVLRCHFINK 465 (537)
Q Consensus 391 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~v~~~~~s~~ 465 (537)
+..... -..+ ++|++.|+.+..++.|.++|..+.+.+.++.-. .. .++.+.|. +
T Consensus 132 i~~~~e------------------GwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 132 TRYSGE------------------GWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp EECSSC------------------CCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EeCCCc------------------eeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 865321 1222 356777888777899999999999888877642 22 35677887 7
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEecCCccc--eeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 466 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK--IRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 466 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
|+..+..-.++.|.+.|.++|+.+..+....-. ............+.+ |++|+++.|++.+.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGI---A~dp~~~rlfVTGK 254 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGI---AVEPGSGRIFMTGK 254 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEE---EECTTTCCEEEEET
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEE---EEcCCCCEEEEeCC
Confidence 765555556889999999999999888643110 000000011122556 99998887776653
No 246
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.81 E-value=2.3e-07 Score=86.04 Aligned_cols=190 Identities=12% Similarity=0.039 Sum_probs=115.2
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCcee----------------eEEEEecCCCCEEEEEcC-----CCcE
Q psy10942 321 KDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKL----------------LNVLRGHKKGTQIVSTGA-----DGLL 377 (537)
Q Consensus 321 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~----------------~~~~~~~~~~~~l~~~~~-----d~~i 377 (537)
.....++++|+|+.+++.. .++.++||.+. ..+. ...+...+++.++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5688999999999888863 23435555554 2222 222333444555554433 5789
Q ss_pred EEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEE-EEEe---CCCcEEEEECCCceeeeEeecC
Q psy10942 378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRIL-ISSS---GDATIKLWCLTDYVCLKSLEGH 453 (537)
Q Consensus 378 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~---~dg~i~i~d~~~~~~~~~~~~~ 453 (537)
.+||+.+++.+..+....... .+. ..+..++++|++..+ ++.. .++.|.+||+.+++....+.+|
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~-----~~~------~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPIT-----LSN------SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY 164 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTS-----CTT------CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred EEEECCCCeEEEEEECChhhc-----ccc------cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence 999998888766654321100 000 145778888765444 4444 5789999999887766555332
Q ss_pred C-----------------------------cceEEEEEecCCCEEEEEeCCCcEEEEECCC-----Cee-----EE--Ee
Q psy10942 454 D-----------------------------ASVLRCHFINKGTQIVSTGADGLLKLWSIKT-----STC-----VS--TF 492 (537)
Q Consensus 454 ~-----------------------------~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~-----~~~-----~~--~~ 492 (537)
. ..+..++|+|+++.|+.+..++. ++|.+.. +.. .. ..
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIER 243 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEE
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEe
Confidence 1 23588999999999988877663 4444321 100 00 00
Q ss_pred cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 493 DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 493 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.++.... ..+ +++++|+++++...++.|.+|
T Consensus 244 ~g~~g~p-----------dgi---a~d~~G~l~va~~~~~~V~~~ 274 (343)
T 2qe8_A 244 YSEKPIC-----------DGI---SIDKDHNIYVGDLAHSAIGVI 274 (343)
T ss_dssp EEECCSC-----------SCE---EECTTCCEEEEEGGGTEEEEE
T ss_pred cccCCCC-----------ceE---EECCCCCEEEEccCCCeEEEE
Confidence 1111222 567 999999988888888888776
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.78 E-value=9.5e-07 Score=87.51 Aligned_cols=157 Identities=11% Similarity=0.037 Sum_probs=91.8
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeeccc-cc-------ccCCCe--------------------------EEEEEcCCC
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGH-KK-------GHEKDI--------------------------NCVTVSPND 332 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~-------~~~~~v--------------------------~~~~~s~~~ 332 (537)
.++.++.+|.+.++|..+++.+....... .. ....++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 46667778888888888877654331110 00 000011 346788988
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEE-------EEE------cCCCcEEEEECCCCeeeeeeccCCcceE
Q psy10942 333 KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQI-------VST------GADGLLKLWSIKTSTCVSTFDKHALKIW 399 (537)
Q Consensus 333 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l-------~~~------~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 399 (537)
.++++...+....++..... ...+... ... ..+|.+..||..+++.+.++....
T Consensus 398 g~~yv~~~~~~~~~~~~~~~---------~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~---- 464 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLP---------YRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF---- 464 (571)
T ss_dssp TEEEEEEECEEEEEEECCCC---------CCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS----
T ss_pred CEEEEEchhccccccccccc---------cccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC----
Confidence 88888877655555443311 0111100 000 246889999999998877664332
Q ss_pred EEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeecCCcc-eEEEEEecCCCEEE
Q psy10942 400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS-VLRCHFINKGTQIV 470 (537)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~ 470 (537)
.+....+...+..++.++.|+.|+.+|.++++.+.+++..... -.-+.+..+|+.++
T Consensus 465 --------------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 465 --------------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp --------------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred --------------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 1111112223556777899999999999999999988754321 12234556776444
No 248
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.74 E-value=0.00028 Score=70.45 Aligned_cols=143 Identities=6% Similarity=-0.121 Sum_probs=78.4
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceee-eec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLR-SYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
...++|.+ .++.++++-..++.|..++++...... .+. .......+ .+.+. +++++++-...+.|.+.
T Consensus 42 ~~~ld~~~-~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl--AvD~~-------~~~ly~~d~~~~~I~v~ 111 (619)
T 3s94_A 42 AAAVDFVF-SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL--ACDWL-------GEKLYWTDSETNRIEVS 111 (619)
T ss_dssp EEEEEEET-TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE--EEETT-------TTEEEEEETTTTEEEEE
T ss_pred eEEEEEEe-CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE--EEEec-------CCEEEEEeCCCCEEEEE
Confidence 45788883 244444454556778888876553212 222 11333445 33443 55677777778899999
Q ss_pred eccceehhhhc-CCCcceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEEeecchhhhhhhhccc
Q psy10942 83 ETSAVKELYQH-GLSSPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLG 159 (537)
Q Consensus 83 d~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 159 (537)
++......... ..-.....+++.|.+.+|..... .+.|...+++. ..........-.....+++.
T Consensus 112 ~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-----------~~~~~l~~~~~~~P~Glald- 179 (619)
T 3s94_A 112 NLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-----------SSRFIIINSEIYWPNGLTLD- 179 (619)
T ss_dssp ETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-----------CSCEEEECSSCSSEEEEEEE-
T ss_pred ECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-----------CceEEEEeCCCCCCcEEEEE-
Confidence 98754322222 22256789999997666665553 35566666665 22222222222345778888
Q ss_pred CCCccEEEee
Q psy10942 160 EEDSHIVVAS 169 (537)
Q Consensus 160 ~~~~~l~~~~ 169 (537)
++++.|..+.
T Consensus 180 ~~~~~LY~aD 189 (619)
T 3s94_A 180 YEEQKLYWAD 189 (619)
T ss_dssp TTTTEEEEEE
T ss_pred ccCCEEEEEe
Confidence 5555665553
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=3.7e-06 Score=85.16 Aligned_cols=200 Identities=11% Similarity=0.133 Sum_probs=127.0
Q ss_pred CCeEEEEECCCCceeeeeeccccc--------------------------ccCCCeEEEEEcCCCCEEEEEeCCCc----
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKK--------------------------GHEKDINCVTVSPNDKLLASGSLDKT---- 343 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~---- 343 (537)
++.|..+|..+++...+....... .+......++++|+..+++.+..++.
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999876654211000 01111235788898889988887663
Q ss_pred ---------------EEEEEccCCceeeEEEEecC-------------------CCC---EEEEEcCCCcEEEEECCCCe
Q psy10942 344 ---------------VKVWSTTGGLKLLNVLRGHK-------------------KGT---QIVSTGADGLLKLWSIKTST 386 (537)
Q Consensus 344 ---------------i~i~d~~~~~~~~~~~~~~~-------------------~~~---~l~~~~~d~~i~i~d~~~~~ 386 (537)
|..+|.. +++.+-.+...+ ++. .++.++.+|.++++|..+++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~-tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPD-TGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTT-TCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCCCCceeeeeEEEEcCC-CCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 8888888 444444443211 222 57888899999999999999
Q ss_pred eeeeeccCCcceEEEEEe---------c----CCCceEEe-------eeeEEEEcCCCCEEEEE----------------
Q psy10942 387 CVSTFDKHALKIWTLAIT---------K----DENQIITG-------GVWFVNFSPLDRILISS---------------- 430 (537)
Q Consensus 387 ~~~~~~~~~~~i~~~~~~---------~----~~~~~~~~-------~i~~~~~s~~~~~l~~~---------------- 430 (537)
.+......... +...+. + +++..... .-..++++|+..++...
T Consensus 336 ~l~~~~~~~~~-w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 336 LISAEKFGKVT-WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp EEEEEESSCCC-SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred Eeccccccccc-cccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 88554332210 000110 0 00000000 01225666665554432
Q ss_pred --------------------eCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942 431 --------------------SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490 (537)
Q Consensus 431 --------------------~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 490 (537)
..+|.|..||+.+++.+.+.+.+ .+.....+...+.++++++.|+.++.||.++|+.+.
T Consensus 415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhhe
Confidence 12478999999999998887744 334444555677899999999999999999999998
Q ss_pred EecCCc
Q psy10942 491 TFDKHA 496 (537)
Q Consensus 491 ~~~~~~ 496 (537)
.++...
T Consensus 494 ~~~~~~ 499 (668)
T 1kv9_A 494 QFEAQS 499 (668)
T ss_dssp EEECSS
T ss_pred EecCCC
Confidence 887653
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.72 E-value=1e-06 Score=87.19 Aligned_cols=108 Identities=7% Similarity=0.035 Sum_probs=65.2
Q ss_pred CcceEEEecC-cceEEEEEc-Cccceeeeeccccccc-----ee-----eeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 15 TSEFSVHCGR-DKVLFTWDL-SSRKQLRSYPAYESLE-----TC-----AVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 15 ~~~~l~s~~~-~g~v~iwd~-~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
.+..++.++. ++.|.-.|. ++|+++=++....... ++ +..+.|.. ......+++++.++.|..+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~----g~~~~rV~v~t~dg~l~Al 136 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD----GKTPALILKTQLDGNVAAL 136 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC----SSSCCEEEEECTTSEEEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC----CcceeEEEEEcCCCEEEEE
Confidence 4556777777 788999999 9999887766433211 01 11222210 0011236777779999999
Q ss_pred eccceehhhhcCCCc-----ceEEEEEeccccEEEEEe------CCceEEEEeccc
Q psy10942 83 ETSAVKELYQHGLSS-----PLVRIVRSSVKRMYAVVT------ADHNISLYRLNS 127 (537)
Q Consensus 83 d~~~~~~~~~~~~~~-----~v~~~~~s~~~~~la~~~------~d~~i~iwd~~~ 127 (537)
|..+|+.+.+....+ .+.+--.-.++ .+++++ .++.|+-+|..+
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~T 191 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKT 191 (599)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTT
T ss_pred ECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCC
Confidence 999999887654332 22211111244 444444 378999999998
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.71 E-value=9.5e-06 Score=80.35 Aligned_cols=226 Identities=13% Similarity=0.028 Sum_probs=133.5
Q ss_pred EEEEEeC------CCeEEEEECCCCceeeeeeccccc--c-----------------------------c-CC-CeEEEE
Q psy10942 287 LLASGSL------DKTVKVWSTTGGLKLLNVLRGHKK--G-----------------------------H-EK-DINCVT 327 (537)
Q Consensus 287 ~l~~~~~------d~~i~i~~~~~~~~~~~~~~~~~~--~-----------------------------~-~~-~v~~~~ 327 (537)
.++.++. ++.|..+|..+++...+....... . + .. ....++
T Consensus 162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a 241 (571)
T 2ad6_A 162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA 241 (571)
T ss_dssp EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence 4555554 799999999999876554211100 0 0 00 012356
Q ss_pred EcCCCCEEEEEeCC----------------CcEEEEEccCCceeeEEEEec-------------------CCC---CEEE
Q psy10942 328 VSPNDKLLASGSLD----------------KTVKVWSTTGGLKLLNVLRGH-------------------KKG---TQIV 369 (537)
Q Consensus 328 ~s~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~-------------------~~~---~~l~ 369 (537)
+.++...++.+..+ +.|..+|.. +++.+-.++.. .++ ..++
T Consensus 242 ~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~-tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~ 320 (571)
T 2ad6_A 242 YDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLD-TGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLS 320 (571)
T ss_dssp EETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETT-TCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEE
T ss_pred EcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecC-CCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEE
Confidence 77776777776542 258888887 44444333321 123 2466
Q ss_pred EEcCCCcEEEEECCCCeeeeeeccCCc--ceEEEE-------E----ec--CCCceEEe-------eeeEEEEcCCCCEE
Q psy10942 370 STGADGLLKLWSIKTSTCVSTFDKHAL--KIWTLA-------I----TK--DENQIITG-------GVWFVNFSPLDRIL 427 (537)
Q Consensus 370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~-------~----~~--~~~~~~~~-------~i~~~~~s~~~~~l 427 (537)
.++.+|.+.++|..+++.+..+..... ....+. . .| ........ .-..++++|+..++
T Consensus 321 ~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~ 400 (571)
T 2ad6_A 321 HIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTL 400 (571)
T ss_dssp EECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEE
T ss_pred EeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEE
Confidence 788899999999999998876643321 011100 0 00 00000000 01245666666655
Q ss_pred EEEe-------------------------------------CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEE
Q psy10942 428 ISSS-------------------------------------GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV 470 (537)
Q Consensus 428 ~~~~-------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 470 (537)
++.. .+|.|..||+.+++.+.++... ..+....+...+..++
T Consensus 401 yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~ 479 (571)
T 2ad6_A 401 YAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVW 479 (571)
T ss_dssp EEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEE
T ss_pred EEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEE
Confidence 5543 3578999999999988887643 3333333344566788
Q ss_pred EEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEE
Q psy10942 471 STGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR 527 (537)
Q Consensus 471 s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s 527 (537)
.++.|+.|+.+|.++|+.+..++...... ...+ .+..+|++++.
T Consensus 480 ~g~~dg~l~a~D~~tG~~lw~~~~~~~~~----------~~p~---~~~~~G~~yv~ 523 (571)
T 2ad6_A 480 YATLDGYLKALDNKDGKELWNFKMPSGGI----------GSPM---TYSFKGKQYIG 523 (571)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSSCCC----------SCCE---EEEETTEEEEE
T ss_pred EEcCCCeEEEEECCCCCEEEEEeCCCCcE----------eeeE---EEEECCEEEEE
Confidence 89999999999999999998887544322 0233 56678875554
No 252
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.70 E-value=1.2e-05 Score=74.81 Aligned_cols=189 Identities=12% Similarity=0.057 Sum_probs=120.1
Q ss_pred CCCCEEEEEe-CCCcEEEEEccCC---ceeeEEE-----------------EecCCCCEEEEEcCC------CcEEEEEC
Q psy10942 330 PNDKLLASGS-LDKTVKVWSTTGG---LKLLNVL-----------------RGHKKGTQIVSTGAD------GLLKLWSI 382 (537)
Q Consensus 330 ~~~~~l~~~~-~d~~i~i~d~~~~---~~~~~~~-----------------~~~~~~~~l~~~~~d------~~i~i~d~ 382 (537)
+++++|++.+ .++.|+++|+... .+....+ ...+++ .++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7788777654 6788999998622 2444444 233567 66665554 78999999
Q ss_pred CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-------------------CCCcEEEEECCC
Q psy10942 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-------------------GDATIKLWCLTD 443 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------------------~dg~i~i~d~~~ 443 (537)
.+++.+.++.....+ ++ --..+.|+|+++.+++.. .+.+|.+||+.+
T Consensus 172 ~T~~v~~~~~~~~~~--------~~------~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 172 YSFEPLGKWEIDRGD--------QY------LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp TTCCEEEECCSBCTT--------CC------CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred CCCeEEEEEccCCCC--------cc------ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 999998888643221 00 233567788888888774 368999999999
Q ss_pred ceeeeEeecC-C-cceEEEEE--ecCCCEEEEEe------CCCcEEEEECCCCeeE--EEecCCccceec-cCCCC----
Q psy10942 444 YVCLKSLEGH-D-ASVLRCHF--INKGTQIVSTG------ADGLLKLWSIKTSTCV--STFDKHALKIRN-SDSEN---- 506 (537)
Q Consensus 444 ~~~~~~~~~~-~-~~v~~~~~--s~~~~~l~s~~------~dg~v~vwd~~~~~~~--~~~~~~~~~i~~-~~~~~---- 506 (537)
++.+.++... . .....+.| +|+++++++++ .+++|.+|..+.++.. +.+......+.. .....
T Consensus 238 ~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 238 RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 9888888753 1 23456666 99999988777 4568888776655321 111111111100 00000
Q ss_pred --CCccccccceeeecCCCEEEEEeC-CCCEEe
Q psy10942 507 --DHKGFGLPRQLCSRNSDCEYRGGW-SPQVVV 536 (537)
Q Consensus 507 --~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~v 536 (537)
...+..+ .+|+||++|+++.. .+.|.+
T Consensus 318 ~~~~~pa~I---~lS~DGrfLYVSnrg~d~Vav 347 (462)
T 2ece_A 318 AVPPLVTDI---DISLDDKFLYLSLWGIGEVRQ 347 (462)
T ss_dssp EECCCCCCE---EECTTSCEEEEEETTTTEEEE
T ss_pred cCCCceeEE---EECCCCCEEEEEeCCCCEEEE
Confidence 1223667 99999999998765 455654
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.67 E-value=2.1e-06 Score=86.97 Aligned_cols=225 Identities=12% Similarity=0.076 Sum_probs=137.0
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEE-EEEcCCCCEEEEEeC------CCcEEEEEccCCceeeEE
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINC-VTVSPNDKLLASGSL------DKTVKVWSTTGGLKLLNV 358 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~ 358 (537)
..++.++.|+.|..+|..+++...+...... .....+.+ ..+. ++ .++++.. ++.|+.+|.. +++.+-.
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~ 193 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDP-AKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDAD-TGKLAWR 193 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCT-TSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETT-TCCEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCC-CCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECC-CCcEEEE
Confidence 4678888999999999999987665422100 00011110 1111 34 4555543 5889999998 4444443
Q ss_pred EEe-----------------------------------------cCCCCEEEEEcCCC-------------------cEE
Q psy10942 359 LRG-----------------------------------------HKKGTQIVSTGADG-------------------LLK 378 (537)
Q Consensus 359 ~~~-----------------------------------------~~~~~~l~~~~~d~-------------------~i~ 378 (537)
+.. .+....++.++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 331 11245666776655 388
Q ss_pred EEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC---EEEEEeCCCcEEEEECCCceeeeEeecCCc
Q psy10942 379 LWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR---ILISSSGDATIKLWCLTDYVCLKSLEGHDA 455 (537)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 455 (537)
.+|..+++.+..++......+..... .+.....+..+|+ .++.++.+|.++++|..+|+.+...+....
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~--------~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~ 345 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTAT--------QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKV 345 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCC--------SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred EEcCCCCceeeEeecCCCccccccCC--------CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccc
Confidence 99999999887776432111110000 0111112223554 688889999999999999998854432110
Q ss_pred ------------ce------------------------EEEEEecCCCEEEEEe--------------------------
Q psy10942 456 ------------SV------------------------LRCHFINKGTQIVSTG-------------------------- 473 (537)
Q Consensus 456 ------------~v------------------------~~~~~s~~~~~l~s~~-------------------------- 473 (537)
++ ..++++|+..+++...
T Consensus 346 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 346 TWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp CSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred ccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccc
Confidence 00 1267888777665421
Q ss_pred ----------CCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEeC
Q psy10942 474 ----------ADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVVY 537 (537)
Q Consensus 474 ----------~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~vW 537 (537)
.+|.|..||+.+|+.+.....+. .. ... .+...+.+++.++.||.++.|
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~-----------~~~---~~~t~gg~vf~g~~dg~l~a~ 484 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HW-----------NGG---TLSTAGNLVFQGTAAGQMHAY 484 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SC-----------CCC---EEEETTTEEEEECTTSEEEEE
T ss_pred cccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CC-----------cCc---eeEeCCCEEEEECCcccchhh
Confidence 23789999999999988776443 22 334 567788899999999998764
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.64 E-value=2.3e-05 Score=77.56 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=56.5
Q ss_pred CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccc
Q psy10942 432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGF 511 (537)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 511 (537)
.+|.|.-||+.+++.+.+.+.. .+...-.....+.+++.++.|+.++.||.++|+.+..++.....+ ..
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~----------~~ 519 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI----------GY 519 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC----------SC
T ss_pred CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE----------ec
Confidence 3478999999999988877532 222221233356788889999999999999999999887554333 03
Q ss_pred cccceeeecCCCEEE
Q psy10942 512 GLPRQLCSRNSDCEY 526 (537)
Q Consensus 512 ~~~~~~~s~~~~~l~ 526 (537)
.+ .+..+|++.+
T Consensus 520 P~---~y~~~G~qyv 531 (599)
T 1w6s_A 520 PM---TYTHKGTQYV 531 (599)
T ss_dssp CE---EEEETTEEEE
T ss_pred cE---EEEeCCEEEE
Confidence 34 6777887543
No 255
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.61 E-value=0.00066 Score=67.78 Aligned_cols=143 Identities=6% Similarity=-0.100 Sum_probs=83.8
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeecc-ccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPA-YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE 83 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd 83 (537)
+..|+|.+ .++..+++-..++.|..++++.......+.. ......+ ++-+. +++++++-...+.|.+.+
T Consensus 39 ~~~l~~d~-~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl--AvD~~-------~~~LY~tD~~~~~I~v~~ 108 (628)
T 4a0p_A 39 ASALDFDV-TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM--AVDWL-------GKNLYWADTGTNRIEVSK 108 (628)
T ss_dssp EEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE--EEETT-------TTEEEEEETTTTEEEEEE
T ss_pred eEEEEEEC-CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE--EEEeC-------CCEEEEEECCCCEEEEEe
Confidence 45788883 2445555656678888888875443333331 1234445 33443 556777777788899999
Q ss_pred ccceehhhhc-CCCcceEEEEEeccccEEEEEeC--CceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccC
Q psy10942 84 TSAVKELYQH-GLSSPLVRIVRSSVKRMYAVVTA--DHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGE 160 (537)
Q Consensus 84 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (537)
+......... ..-.....+++.|...+|..... .+.|...+++.. . ...+...-.....+++. +
T Consensus 109 ~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-----------~-~~~l~~~~~~P~GlalD-~ 175 (628)
T 4a0p_A 109 LDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-----------E-RTTLVPNVGRANGLTID-Y 175 (628)
T ss_dssp TTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-----------S-CEEEECSCSSEEEEEEE-T
T ss_pred cCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-----------c-eEEEECCCCCcceEEEc-c
Confidence 8654321111 22356899999996666665542 456777777762 2 22222233346778888 5
Q ss_pred CCccEEEeee
Q psy10942 161 EDSHIVVASN 170 (537)
Q Consensus 161 ~~~~l~~~~~ 170 (537)
+++.|..+..
T Consensus 176 ~~~~LY~aD~ 185 (628)
T 4a0p_A 176 AKRRLYWTDL 185 (628)
T ss_dssp TTTEEEEEET
T ss_pred ccCEEEEEEC
Confidence 5566655543
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.55 E-value=4e-07 Score=79.33 Aligned_cols=199 Identities=7% Similarity=-0.054 Sum_probs=125.2
Q ss_pred eeeeeeeccCCcceEEEecC--cceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 5 VTCFDVIPQITSEFSVHCGR--DKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~--~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
...|.|+ +|+.++++.+. ++.|++.|+++++.+..++........++... ++.+.++.-.++.+.++
T Consensus 23 ~~Gl~~~--~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~---------g~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYA--ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL---------NEKLYQVVWLKNIGFIY 91 (266)
T ss_dssp EEEEEEC--STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE---------TTEEEEEETTCSEEEEE
T ss_pred cccEEEe--CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe---------CCEEEEEEecCCEEEEE
Confidence 3578898 66665555553 57899999999999998875444333333333 33556666678999999
Q ss_pred eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh-----hhhhhhc
Q psy10942 83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD-----EILDIAL 157 (537)
Q Consensus 83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~ 157 (537)
|..+++.+.++... .-....+++||+.|+++..++.|.++|..+ .+....+.-... .++.+.|
T Consensus 92 D~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t-----------~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHT-----------FKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp ETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTT-----------CCEEEEEECEETTEECCCEEEEEE
T ss_pred ECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCC-----------CcEEEEEEECCCCcccccceeEEE
Confidence 99999988887643 112345778999888887788999999998 666666653221 2456666
Q ss_pred ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccc------ccCCCcCeEE
Q psy10942 158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTER------LGRDELKTVT 229 (537)
Q Consensus 158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~------~~h~~~~~v~ 229 (537)
. + ..+++.... . ..| .+.|. .+++.. +....+ ..+.......
T Consensus 160 ~--d-g~lyvn~~~-~--~~V-----------------~vID~-------~tg~V~~~I~~~g~~~~~~~~~~~~~~v~n 209 (266)
T 2iwa_A 160 I--N-GEVWANIWQ-T--DCI-----------------ARISA-------KDGTLLGWILLPNLRKKLIDEGFRDIDVLN 209 (266)
T ss_dssp E--T-TEEEEEETT-S--SEE-----------------EEEET-------TTCCEEEEEECHHHHHHHHHTTCTTCCCEE
T ss_pred E--C-CEEEEecCC-C--CeE-----------------EEEEC-------CCCcEEEEEECCCcccccccccccccCceE
Confidence 5 2 345443322 1 225 55566 555544 221100 0110024568
Q ss_pred EEeccCcccCCCeee-eccCCCcceeccccccC
Q psy10942 230 LLERGKTVKEEDLFP-RQSMEPSTLEELEKRKT 261 (537)
Q Consensus 230 ~~~~~~~s~~~~~l~-~~~~d~~i~~~iw~~~~ 261 (537)
.+ +|+|+++.++ ++...+.+. .-++..
T Consensus 210 GI---a~~~~~~~lfVTgk~~~~v~--~i~l~~ 237 (266)
T 2iwa_A 210 GI---AWDQENKRIFVTGKLWPKLF--EIKLHL 237 (266)
T ss_dssp EE---EEETTTTEEEEEETTCSEEE--EEEEEE
T ss_pred EE---EEcCCCCEEEEECCCCCeEE--EEEEec
Confidence 89 9999986554 555566666 555544
No 257
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.54 E-value=0.00034 Score=74.72 Aligned_cols=87 Identities=8% Similarity=0.126 Sum_probs=54.8
Q ss_pred EEEEEcCccceeeeec--cccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecccee--hhhhcCCCcceEEEE
Q psy10942 28 LFTWDLSSRKQLRSYP--AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVK--ELYQHGLSSPLVRIV 103 (537)
Q Consensus 28 v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~--~~~~~~~~~~v~~~~ 103 (537)
|++.+.+.++.+...+ ....|..+++ +...++.+. .+.+.++.+..++ .+......+.|.|++
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~------------n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~ 560 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASC------------NSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLD 560 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEE------------CSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEE
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEe------------CCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEE
Confidence 5566655554554443 2334554422 223455553 5678788776543 233344457899999
Q ss_pred Eecc------ccEEEEEeC-CceEEEEeccc
Q psy10942 104 RSSV------KRMYAVVTA-DHNISLYRLNS 127 (537)
Q Consensus 104 ~s~~------~~~la~~~~-d~~i~iwd~~~ 127 (537)
+.|. ++++|+|.. |++++|+++.+
T Consensus 561 i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 561 ITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred eecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 9763 368999996 99999999987
No 258
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.53 E-value=5.5e-07 Score=77.37 Aligned_cols=186 Identities=9% Similarity=0.028 Sum_probs=120.1
Q ss_pred eeeeeeeccCCcceEEEecCcc--eEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDK--VLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
...|.|+ ++.++.+.+.+| .|++.|+++++.+++++........++.... + ++.+....++.+.+|
T Consensus 45 tqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g--------~-~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 45 TEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK--------D-KIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET--------T-EEEEEESSSSEEEEE
T ss_pred cceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC--------C-EEEEEEeeCCEEEEE
Confidence 4567777 456677777665 8999999999999988865555443333333 3 455555668899999
Q ss_pred eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecch--hh---hhhhhc
Q psy10942 83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFS--DE---ILDIAL 157 (537)
Q Consensus 83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~---v~~~~~ 157 (537)
|..+++.+.++.... ....+++|++.|+.+..++.|.++|..+ .+...++.-.. .. ++.+.|
T Consensus 113 D~~t~~~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T-----------~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 113 NIRNLRQVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPES-----------LTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp ETTTCCEEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTT-----------CSEEEEEECEETTEECCCEEEEEE
T ss_pred ECccCcEEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCC-----------CeEEEEEEeccCCccccccceeEE
Confidence 999999998888654 3345557888888877678899999998 67676665422 22 234666
Q ss_pred ccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--ccccccc-----cCCCcCeEEE
Q psy10942 158 LGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERL-----GRDELKTVTL 230 (537)
Q Consensus 158 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~-----~h~~~~~v~~ 230 (537)
. +..|.+..... ..| .+.|. ++++.. +....+. .++.......
T Consensus 180 ~---~G~lyan~w~~---~~I-----------------~vIDp-------~tG~V~~~Id~~~L~~~~~~~~~~~~vlNG 229 (262)
T 3nol_A 180 V---DGEIFANVWQT---NKI-----------------VRIDP-------ETGKVTGIIDLNGILAEAGPLPSPIDVLNG 229 (262)
T ss_dssp E---TTEEEEEETTS---SEE-----------------EEECT-------TTCBEEEEEECTTGGGGSCSCCSSCCCEEE
T ss_pred E---CCEEEEEEccC---CeE-----------------EEEEC-------CCCcEEEEEECCcCccccccccCcCCceEE
Confidence 5 33455444222 225 55566 666655 2211111 1111345688
Q ss_pred EeccCcccCCCeeeeccC
Q psy10942 231 LERGKTVKEEDLFPRQSM 248 (537)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~ 248 (537)
+ +|+|+++.|+..+.
T Consensus 230 I---A~dp~~~~lfVTGK 244 (262)
T 3nol_A 230 I---AWDKEHHRLFVTGK 244 (262)
T ss_dssp E---EEETTTTEEEEEET
T ss_pred E---EEcCCCCEEEEECC
Confidence 9 99999887776665
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.52 E-value=1.5e-06 Score=74.01 Aligned_cols=185 Identities=6% Similarity=-0.021 Sum_probs=119.8
Q ss_pred eeeeeeeccCCcceEEEecCc--ceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEee
Q psy10942 5 VTCFDVIPQITSEFSVHCGRD--KVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYY 82 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w 82 (537)
...|.|+ + +.++.+.+.+ ..|+..|+++++.++.++........++.... + ++......++.+.+|
T Consensus 23 tqGL~~~--~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--------~-~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 23 TEGLFYL--R-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--------D-RLIQLTWRNHEGFVY 90 (243)
T ss_dssp EEEEEEE--T-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--------T-EEEEEESSSSEEEEE
T ss_pred cccEEEE--C-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--------C-EEEEEEeeCCEEEEE
Confidence 4567888 4 5666776765 48999999999999988866655444333333 3 555556678999999
Q ss_pred eccceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh-----hhhhhhc
Q psy10942 83 ETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD-----EILDIAL 157 (537)
Q Consensus 83 d~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~ 157 (537)
|..+.+.+.++..... ...+.+|++.|+++..++.|.++|..+ .+.++++.-... .++.+.|
T Consensus 91 D~~tl~~~~ti~~~~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t-----------~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 91 DLATLTPRARFRYPGE--GWALTSDDSHLYMSDGTAVIRKLDPDT-----------LQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp ETTTTEEEEEEECSSC--CCEEEECSSCEEEECSSSEEEEECTTT-----------CCEEEEEECEETTEECCCEEEEEE
T ss_pred ECCcCcEEEEEeCCCC--ceEEeeCCCEEEEECCCCeEEEEeCCC-----------CeEEEEEEEccCCcccccceeeEE
Confidence 9999999988886543 244457888888877788999999998 677766654321 2334455
Q ss_pred ccCCCccEEEeee-ccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc--cccccccc------CCCcCeE
Q psy10942 158 LGEEDSHIVVASN-EYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ--KHNTERLG------RDELKTV 228 (537)
Q Consensus 158 ~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~--l~~~~~~~------h~~~~~v 228 (537)
. +..+.+... +.. | .+.|. .+++.. +....+.. ++...-.
T Consensus 158 ~---~G~lyanvw~s~~----I-----------------~vIDp-------~tG~V~~~idl~~l~~~~~~~~~~~~~vl 206 (243)
T 3mbr_X 158 V---NGELLANVWLTSR----I-----------------ARIDP-------ASGKVVAWIDLQALVPDADALTDSTNDVL 206 (243)
T ss_dssp E---TTEEEEEETTTTE----E-----------------EEECT-------TTCBEEEEEECGGGSTTTTSCCCTTSSCE
T ss_pred e---CCEEEEEECCCCe----E-----------------EEEEC-------CCCCEEEEEECCcCccccccccCCcCCce
Confidence 4 334544432 222 5 55566 555554 22111111 1113467
Q ss_pred EEEeccCcccCCCeeeeccC
Q psy10942 229 TLLERGKTVKEEDLFPRQSM 248 (537)
Q Consensus 229 ~~~~~~~~s~~~~~l~~~~~ 248 (537)
..+ +++|+++.|+..+.
T Consensus 207 NGI---A~d~~~~~lfVTGK 223 (243)
T 3mbr_X 207 NGI---AFDAEHDRLFVTGK 223 (243)
T ss_dssp EEE---EEETTTTEEEEEET
T ss_pred EEE---EEcCCCCEEEEECC
Confidence 889 99998877776654
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.48 E-value=5.8e-07 Score=77.18 Aligned_cols=117 Identities=7% Similarity=-0.055 Sum_probs=86.1
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeec
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYET 84 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~ 84 (537)
...|.|+ ++.++++.+.+|.|++.|+++++.++.+ ........++.... + ++.+....++.+.+||.
T Consensus 57 tqGL~~~---~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g--------~-~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 57 TQGLVFH---QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG--------E-RLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEEEE---TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS--------S-CEEEEESSSCEEEEEET
T ss_pred cceEEEE---CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC--------C-EEEEEEccCCEEEEEEC
Confidence 4567777 4677788888899999999999999987 44444333233333 3 44445566889999999
Q ss_pred cceehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeec
Q psy10942 85 SAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG 147 (537)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 147 (537)
.+++.+.++..... ...+++|++.|+.+..++.|.++|..+ .+.+.++.-
T Consensus 124 ~Tl~~~~ti~~~~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T-----------~~v~~~I~V 173 (268)
T 3nok_A 124 MPPQRERTTRYSGE--GWGLCYWNGKLVRSDGGTMLTFHEPDG-----------FALVGAVQV 173 (268)
T ss_dssp TTTEEEEEEECSSC--CCCEEEETTEEEEECSSSEEEEECTTT-----------CCEEEEEEC
T ss_pred CcCcEEEEEeCCCc--eeEEecCCCEEEEECCCCEEEEEcCCC-----------CeEEEEEEe
Confidence 99999988886543 234457888888887788999999998 676766654
No 261
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.47 E-value=0.00014 Score=64.53 Aligned_cols=175 Identities=9% Similarity=-0.064 Sum_probs=96.5
Q ss_pred CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEE----------EEecC
Q psy10942 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNV----------LRGHK 363 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~----------~~~~~ 363 (537)
+.|+.++++............+......+..++++|+++.|+.+. .++.|..+++.. ...... +...+
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~p~~ia~d~ 88 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHG-GEPTTIIRQDLGSPEGIALDH 88 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSS-CCCEEEECTTCCCEEEEEEET
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCC-CCcEEEEECCCCCccEEEEEe
Confidence 478888887654210000000111123467999999766665554 567899999873 322222 22222
Q ss_pred C-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC---CCcEEEE
Q psy10942 364 K-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG---DATIKLW 439 (537)
Q Consensus 364 ~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~ 439 (537)
. +..+++-...+.|.++++.......... ... .....++++|++..|..+.. .+.|..+
T Consensus 89 ~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~------------~~~-----~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 89 LGRTIFWTDSQLDRIEVAKMDGTQRRVLFD------------TGL-----VNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC------------SSC-----SSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred cCCeEEEEECCCCEEEEEEcCCCCEEEEEE------------CCC-----CCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 2 2333333445566666654322111111 000 15678889997666655554 3688888
Q ss_pred ECCCceeeeEee-cCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q psy10942 440 CLTDYVCLKSLE-GHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTC 488 (537)
Q Consensus 440 d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~ 488 (537)
++... ....+. ........+++++++..|+.+. ..+.|.+++......
T Consensus 152 ~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 152 HMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp ETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred ecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 87542 222222 2234578999999877665554 567899999875443
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.46 E-value=0.00036 Score=61.76 Aligned_cols=199 Identities=11% Similarity=0.047 Sum_probs=113.8
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCcee---------
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKL--------- 355 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~--------- 355 (537)
..+++-..++.|..++..+..... . ..........++++|++..|+.+ ...+.|.++++......
T Consensus 49 ~ly~~d~~~~~I~~~~~~g~~~~~-~----~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 123 (267)
T 1npe_A 49 VVYWTDISEPSIGRASLHGGEPTT-I----IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVN 123 (267)
T ss_dssp EEEEEETTTTEEEEEESSSCCCEE-E----ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSS
T ss_pred EEEEEECCCCEEEEEecCCCCcEE-E----EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCC
Confidence 345555567899999987654311 1 11222467899999976655554 45678999998732111
Q ss_pred eEEEEecCCCCEEEEEcC---CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942 356 LNVLRGHKKGTQIVSTGA---DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS- 431 (537)
Q Consensus 356 ~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 431 (537)
...+..++++..+..+.. .+.|..+++.... ...+ .... ......++++|++..|..+.
T Consensus 124 P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~-----------~~~~-----~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 124 PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRIL-----------AQDN-----LGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp EEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEE-----------ECTT-----CSCEEEEEEETTTTEEEEEET
T ss_pred ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEE-----------EECC-----CCCCcEEEEcCCCCEEEEEEC
Confidence 112222332233222221 2445555443211 1111 0000 01567899999877666555
Q ss_pred CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCeeEEEecCCc-cceeccCCCCCCc
Q psy10942 432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTCVSTFDKHA-LKIRNSDSENDHK 509 (537)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~ 509 (537)
..+.|.++|.........+.. ......++.. +..|+.+. ..+.|.++|..+++.+..+.... ...
T Consensus 187 ~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p---------- 253 (267)
T 1npe_A 187 GTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRL---------- 253 (267)
T ss_dssp TTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCC----------
T ss_pred CCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccccccc----------
Confidence 457899999976544433332 2334566654 44555444 56899999999999888876433 223
Q ss_pred cccccceeeecCCC
Q psy10942 510 GFGLPRQLCSRNSD 523 (537)
Q Consensus 510 ~~~~~~~~~s~~~~ 523 (537)
..+ ++.|++.
T Consensus 254 -~gi---~~~~~~~ 263 (267)
T 1npe_A 254 -YGI---TIALSQC 263 (267)
T ss_dssp -CCE---EEECSCC
T ss_pred -cee---eecCccC
Confidence 677 8888875
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=8.1e-05 Score=68.11 Aligned_cols=80 Identities=10% Similarity=-0.121 Sum_probs=54.2
Q ss_pred eeeEEEEcCCCCEEEEE-eCCCcEEEEECCCce--eeeEeecCCcceEEEEEecCCCEEEEEeC----------CCcEEE
Q psy10942 414 GVWFVNFSPLDRILISS-SGDATIKLWCLTDYV--CLKSLEGHDASVLRCHFINKGTQIVSTGA----------DGLLKL 480 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~v~v 480 (537)
....++++|++++|..+ ..++.|..|++.... ....+....+ ...+++.++|++.++... .+.|..
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~ 264 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIK 264 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEE
Confidence 45678999999876666 456899999987421 1111211223 688999999987776654 467888
Q ss_pred EECCCCeeEEEecCC
Q psy10942 481 WSIKTSTCVSTFDKH 495 (537)
Q Consensus 481 wd~~~~~~~~~~~~~ 495 (537)
+|. .++.+..+...
T Consensus 265 ~d~-~G~~~~~~~~~ 278 (322)
T 2fp8_A 265 FDE-FGNILEVIPLP 278 (322)
T ss_dssp ECT-TSCEEEEEECC
T ss_pred ECC-CCCEEEEEECC
Confidence 886 57777777544
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.28 E-value=0.00041 Score=62.79 Aligned_cols=211 Identities=8% Similarity=-0.007 Sum_probs=116.3
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCceeeEEEEe---
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK--TVKVWSTTGGLKLLNVLRG--- 361 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~--- 361 (537)
++++-..++.|..||..+.... . . ........++++++|+++++..... .|..++.. ..+.......
T Consensus 45 lyv~d~~~~~I~~~d~~g~~~~--~----~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~~~~ 116 (306)
T 2p4o_A 45 IFVTNHEVGEIVSITPDGNQQI--H----A-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVETLLTLPDA 116 (306)
T ss_dssp EEEEETTTTEEEEECTTCCEEE--E----E-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEEEEEECTTC
T ss_pred EEEEeCCCCeEEEECCCCceEE--E----E-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeCCCc
Confidence 4444456788888887764321 1 1 1124578999999999666554332 36666655 3333222111
Q ss_pred --------cCCCCEEEEEcCCCcEEEEECCCCee-eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942 362 --------HKKGTQIVSTGADGLLKLWSIKTSTC-VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS- 431 (537)
Q Consensus 362 --------~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 431 (537)
...+..+++-..++.|..+|..+++. +......... ..+.+... ....+ +|++++|..+.
T Consensus 117 ~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~-----~~~~~~~~---~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 117 IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR-----SNSESVFP---AANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC-----SSTTCCSC---SEEEE--EEETTEEEEEET
T ss_pred cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc-----ccccCCCC---cCCCc--CcCCCEEEEEeC
Confidence 11122344444577888888765421 1111000000 00000000 22334 77887666554
Q ss_pred CCCcEEEEECCC-cee--eeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE--EecCCccceeccCCCC
Q psy10942 432 GDATIKLWCLTD-YVC--LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS--TFDKHALKIRNSDSEN 506 (537)
Q Consensus 432 ~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~--~~~~~~~~i~~~~~~~ 506 (537)
..+.|..|++.. ++. ...+.. ......++++++|+++++....+.|.+++.. ++... .+.......
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p------- 257 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS------- 257 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE-------
T ss_pred CCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCc-------
Confidence 567899999864 321 112211 1345678999999887777778899999974 66532 222222233
Q ss_pred CCccccccceeee---cCCCEEEEEeCC
Q psy10942 507 DHKGFGLPRQLCS---RNSDCEYRGGWS 531 (537)
Q Consensus 507 ~~~~~~~~~~~~s---~~~~~l~s~~~d 531 (537)
+++ +|. ||++.|+.++..
T Consensus 258 ----~~~---a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 258 ----TAV---AFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ----EEE---EECCSTTTTTEEEEEECT
T ss_pred ----eEE---EEecccCCCCEEEEECCC
Confidence 677 998 898888776543
No 265
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.23 E-value=0.0057 Score=61.00 Aligned_cols=130 Identities=10% Similarity=-0.045 Sum_probs=70.1
Q ss_pred eEEEecCcceEEEEEcCccc--eeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehh-hhcC
Q psy10942 18 FSVHCGRDKVLFTWDLSSRK--QLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKEL-YQHG 94 (537)
Q Consensus 18 ~l~s~~~~g~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~-~~~~ 94 (537)
+|+-+.. ..|+.-|+.... .....+......++ .+.+. ++.++++-...+.|..+++...... ..+.
T Consensus 11 ~~~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~~~~l--d~~~~-------~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~ 80 (619)
T 3s94_A 11 LLLYANR-RDLRLVDATNGKENATIVVGGLEDAAAV--DFVFS-------HGLIYWSDVSEEAIKRTEFNKTESVQNVVV 80 (619)
T ss_dssp CEEEECS-SBEEEECCC---------CBCCSCEEEE--EEETT-------TTEEEEEETTTTEEEEEEC-----CEEEEC
T ss_pred eEEEecc-ccEEEEeCCCCcceEEEEEcCCCceEEE--EEEeC-------CCEEEEEECCCCeEEEEEccCCCceEEEEe
Confidence 3444433 458888887653 22223333344444 45664 5566666666788888888755321 1122
Q ss_pred -CCcceEEEEEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEee
Q psy10942 95 -LSSPLVRIVRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 95 -~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
.-.....+++.+.++.|+.+ ...+.|.+.++++ ......+...-.....+++. +.++.|+.+.
T Consensus 81 ~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG-----------~~~~~l~~~~l~~P~~Iavd-p~~g~ly~tD 145 (619)
T 3s94_A 81 SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG-----------SLRKVLFWQELDQPRAIALD-PSSGFMYWTD 145 (619)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-----------CSCEEEECSSCSCCCCEEEE-TTTTEEEEEE
T ss_pred CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC-----------CCEEEEEeCCCCCCceEEEe-cCCCeEEEec
Confidence 22578999999966655544 4567899999887 22222222333446788888 4445555543
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.21 E-value=0.00039 Score=60.14 Aligned_cols=204 Identities=12% Similarity=0.056 Sum_probs=115.8
Q ss_pred cccccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEccCCceeeEEEEe-----------cCCCCEEEEEcCCCcEEEEEC
Q psy10942 315 HKKGHEKDINCVTVSPNDKLLA-SGSLDKTVKVWSTTGGLKLLNVLRG-----------HKKGTQIVSTGADGLLKLWSI 382 (537)
Q Consensus 315 ~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~-----------~~~~~~l~~~~~d~~i~i~d~ 382 (537)
.+.+-...+..++++|+++.|+ +...++.|...|+. ++.++.+.. ..++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3445556799999999876555 46677888888876 455555432 233555556556778888877
Q ss_pred CCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC---ceeeeEee-------c
Q psy10942 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD---YVCLKSLE-------G 452 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-------~ 452 (537)
.....+........+ +...+. -.....++|+|+++.|.++.......+|.+.. ...+..+. .
T Consensus 99 ~~~~~i~~~~~~~~~---~~~~~~-----N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 99 TPNSEVKILKKIKIP---LQESPT-----NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp CTTCCEEEEEEEECC---CSSCCC-----SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred CCCCeeeeeeeeccc---cccccc-----cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 654422111100000 000011 11678899999998777777665556665531 11122221 1
Q ss_pred CCcceEEEEEecCCC-EEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCC
Q psy10942 453 HDASVLRCHFINKGT-QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWS 531 (537)
Q Consensus 453 ~~~~v~~~~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~d 531 (537)
+...+.+++++|... +++.....+.+.++|. +|+.+..+.-..+.- .-...-.++-.| +|.++|++. .+++-
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~--~l~~~~~qpEGi---a~d~~G~ly-IvsE~ 243 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSR--GLSHNIKQAEGV---AMDASGNIY-IVSEP 243 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGG--GCSSCCCSEEEE---EECTTCCEE-EEETT
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccC--CcccccCCCCee---EECCCCCEE-EEcCC
Confidence 234578999999654 5555556778899996 466666554322100 000111233667 999999844 44665
Q ss_pred CCEE
Q psy10942 532 PQVV 535 (537)
Q Consensus 532 g~i~ 535 (537)
+.+.
T Consensus 244 n~~y 247 (255)
T 3qqz_A 244 NRFY 247 (255)
T ss_dssp TEEE
T ss_pred ceEE
Confidence 5443
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.21 E-value=0.00084 Score=66.53 Aligned_cols=140 Identities=6% Similarity=0.009 Sum_probs=85.6
Q ss_pred CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc-CCCC---EEEEEeCCCcEEEEECCCceeeeEe
Q psy10942 375 GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS-PLDR---ILISSSGDATIKLWCLTDYVCLKSL 450 (537)
Q Consensus 375 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~ 450 (537)
+.|..+|..+++.+..++......+.... + ..++. +... .+|+ .++.++.+|.++++|..+++.+..+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~-~------~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSG-N------NELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCC-C------CCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccC-C------CCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 57899999999988776542211110000 0 00111 1111 4563 6888899999999999999988766
Q ss_pred ecCCc-------------ce--------------------------------EEEEEecCCCEEEEEe------------
Q psy10942 451 EGHDA-------------SV--------------------------------LRCHFINKGTQIVSTG------------ 473 (537)
Q Consensus 451 ~~~~~-------------~v--------------------------------~~~~~s~~~~~l~s~~------------ 473 (537)
..... ++ ..++++|+..++++..
T Consensus 363 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~ 442 (582)
T 1flg_A 363 PFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEV 442 (582)
T ss_dssp ESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCC
T ss_pred ccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccc
Confidence 53320 00 1346677655554432
Q ss_pred ---------------------CCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCC
Q psy10942 474 ---------------------ADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSP 532 (537)
Q Consensus 474 ---------------------~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg 532 (537)
.+|.|.-||+.+|+.+....... +. ..- .....+.+++.++.||
T Consensus 443 ~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~-----------~~g---~~~tagglvf~g~~dg 507 (582)
T 1flg_A 443 SYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PL-----------WAG---VLATAGNLVFTGTGDG 507 (582)
T ss_dssp CCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CC-----------CSC---CEEETTTEEEEECTTS
T ss_pred cccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CC-----------ccc---ceEeCCCEEEEECCCC
Confidence 25789999999999887765432 22 222 3444677888888888
Q ss_pred CEEeC
Q psy10942 533 QVVVY 537 (537)
Q Consensus 533 ~i~vW 537 (537)
.++.|
T Consensus 508 ~l~A~ 512 (582)
T 1flg_A 508 YFKAF 512 (582)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 88753
No 268
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.20 E-value=0.012 Score=63.17 Aligned_cols=114 Identities=15% Similarity=0.076 Sum_probs=68.7
Q ss_pred eeeeeeeeeccCC----cceEEEecC-cceEEEEEcCccceeeeecccc--ccceeeeEeecCccccccCCcEEEEEeCc
Q psy10942 3 FCVTCFDVIPQIT----SEFSVHCGR-DKVLFTWDLSSRKQLRSYPAYE--SLETCAVFHLSDETESKSGGKTFVLAGGE 75 (537)
Q Consensus 3 ~~V~~~~~~~~~~----~~~l~s~~~-~g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (537)
.-|+|+++.|.++ +++++.|.. |++|+|+++.+.+.+....... ....+.+.... +..++.++-.
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~--------~~~~L~igl~ 625 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFE--------SSHYLLCALG 625 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEET--------TEEEEEEEET
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeC--------CCcEEEEEeC
Confidence 3589999986554 468888885 9999999999877776544322 33444333332 5578889988
Q ss_pred cceEEeeecc--ceehhh---hcCCCcceEEEEEeccccEEEEEeCCceEEEEe
Q psy10942 76 KSLLHYYETS--AVKELY---QHGLSSPLVRIVRSSVKRMYAVVTADHNISLYR 124 (537)
Q Consensus 76 ~~~i~~wd~~--~~~~~~---~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 124 (537)
||.+..+.+. +|+... ..-+..++.-..|...|..-+.+..+....++.
T Consensus 626 dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~ 679 (1158)
T 3ei3_A 626 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYS 679 (1158)
T ss_dssp TSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEE
T ss_pred CCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEE
Confidence 9987666543 343321 122334555555554444433444445444554
No 269
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.19 E-value=0.0072 Score=60.35 Aligned_cols=181 Identities=7% Similarity=-0.115 Sum_probs=100.8
Q ss_pred CcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCC-CcceEEE
Q psy10942 24 RDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGL-SSPLVRI 102 (537)
Q Consensus 24 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-~~~v~~~ 102 (537)
....|+.-|+++.+....++....-...++.+.+. ++.++++-..++.|..+++........+.. -.....+
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~-------~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVT-------DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETT-------TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECC-------CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 44569999998766544555332222233355665 556777777788899888865433222222 2467789
Q ss_pred EEeccccEEEEE-eCCceEEEEecccccCcccccccccceeEEeecchhhhhhhhcccCCCccEEEeeeccccCCcccce
Q psy10942 103 VRSSVKRMYAVV-TADHNISLYRLNSETGLEERPNKILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGL 181 (537)
Q Consensus 103 ~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i~~~ 181 (537)
++.+.+..|..+ ...+.|.+.++++. .....+...-.....+++. |..+.|..+..... +.|
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~-----------~~~~l~~~~l~~P~~iavd-p~~G~lY~tD~g~~--~~I--- 148 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQ-----------HRQVLVWKDLDSPRALALD-PAEGFMYWTEWGGK--PKI--- 148 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTST-----------TCEEEECSSCCCEEEEEEE-TTTTEEEEEECSSS--CEE---
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCC-----------cEEEEEeCCCCCcccEEEc-cCCCeEEEeCCCCC--CEE---
Confidence 998766655444 45678888888762 2111222222346788888 44455555432211 224
Q ss_pred eecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcccCCCeeeec-cCCCcceeccccc
Q psy10942 182 VKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTVKEEDLFPRQ-SMEPSTLEELEKR 259 (537)
Q Consensus 182 ~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s~~~~~l~~~-~~d~~i~~~iw~~ 259 (537)
...++ ...... +- .. -.....+ +++++++.|+.+ ...+.|. ..++
T Consensus 149 --------------~r~~~-------dG~~~~~l~-----~~--~~~P~Gl---alD~~~~~LY~aD~~~~~I~--~~d~ 195 (628)
T 4a0p_A 149 --------------DRAAM-------DGSERTTLV-----PN--VGRANGL---TIDYAKRRLYWTDLDTNLIE--SSNM 195 (628)
T ss_dssp --------------EEEET-------TSCSCEEEE-----CS--CSSEEEE---EEETTTTEEEEEETTTTEEE--EEET
T ss_pred --------------EEEeC-------CCCceEEEE-----CC--CCCcceE---EEccccCEEEEEECCCCEEE--EEcC
Confidence 22222 222222 22 22 3456788 888876665544 4456676 6676
Q ss_pred cC
Q psy10942 260 KT 261 (537)
Q Consensus 260 ~~ 261 (537)
+.
T Consensus 196 dG 197 (628)
T 4a0p_A 196 LG 197 (628)
T ss_dssp TS
T ss_pred CC
Confidence 55
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.11 E-value=0.0022 Score=60.05 Aligned_cols=180 Identities=7% Similarity=-0.062 Sum_probs=94.2
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEec-CCCCEEEEE
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGH-KKGTQIVST 371 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~l~~~ 371 (537)
...|+..++.+..... +......+..++|++.++.|+.. ...+.|+.+++. +......+... ....-++..
T Consensus 95 ~~~I~~i~~~~~~~~~------~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd 167 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTL------LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGLESPGGLAVD 167 (386)
T ss_dssp BSCEEEECTTSCCCEE------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCEEEEECSSCSCCCCEEEE
T ss_pred CccceeeccCCCcEEE------EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecC-CCCcEEEEeCCCCCccEEEEE
Confidence 3568888887654321 11223457899999866655554 456789999987 33322222111 111122222
Q ss_pred cCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-C-CcEEEEECCCceeeeE
Q psy10942 372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-D-ATIKLWCLTDYVCLKS 449 (537)
Q Consensus 372 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~ 449 (537)
..++.+++-|...... ..+........ ....... .....++++|.+..|+.... . +.|..+++........
T Consensus 168 ~~~g~lY~~d~~~~~I-~~~~~dg~~~~-~l~~~~l-----~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 168 WVHDKLYWTDSGTSRI-EVANLDGAHRK-VLLWQSL-----EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp TTTTEEEEEETTTTEE-EECBTTSCSCE-EEECSSC-----SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred eCCCeEEEEcCCCCeE-EEEeCCCCceE-EeecCCC-----CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 2334444444332211 11111110000 0111100 14677888887766665543 3 6788888765333222
Q ss_pred eecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCe
Q psy10942 450 LEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTST 487 (537)
Q Consensus 450 ~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~ 487 (537)
........+.++++|++..|+.+. ..+.|..+++....
T Consensus 241 ~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 241 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence 333334578999998766666554 46779999986433
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.09 E-value=0.00019 Score=72.68 Aligned_cols=268 Identities=11% Similarity=0.006 Sum_probs=134.8
Q ss_pred Cccc-CCCeeeeccCCC-----------cceeccccccCCCcccccccccccceee-eee-CCcceEEEEEe-CCCeEEE
Q psy10942 235 KTVK-EEDLFPRQSMEP-----------STLEELEKRKTYHFPLFGIFVPEAEHGA-FYT-GGTVELLASGS-LDKTVKV 299 (537)
Q Consensus 235 ~~s~-~~~~l~~~~~d~-----------~i~~~iw~~~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~l~~~~-~d~~i~i 299 (537)
++.+ +++.++.|+.+. .+. +||...........+..+..... ... ...-.+++.|+ .+..+.+
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~--~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTS--SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEE--EECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEE--EEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 4566 788888876543 355 78877654221111100000000 000 00015667776 4568999
Q ss_pred EECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CC-----CcEEEEEccCCceeeEEEE--------ec---
Q psy10942 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LD-----KTVKVWSTTGGLKLLNVLR--------GH--- 362 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~~~--------~~--- 362 (537)
||..+.+-.. ...+.... .-.+++..+++++++.|+ .+ ..+.+||.. ...-. .+. ..
T Consensus 270 yd~~t~~W~~---~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~-t~~W~-~~~~~~~~p~~~~~~~ 343 (656)
T 1k3i_A 270 YDSSSDSWIP---GPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS-SKTWT-SLPNAKVNPMLTADKQ 343 (656)
T ss_dssp EEGGGTEEEE---CCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT-TTEEE-EETTSCSGGGCCCCTT
T ss_pred ecCcCCceeE---CCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCC-CCcce-eCCCcccccccccccc
Confidence 9998765321 11111111 123455667999999988 34 568999987 33322 210 00
Q ss_pred ----CCCCEEEEEcCCC---------cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc-CCCCEEE
Q psy10942 363 ----KKGTQIVSTGADG---------LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS-PLDRILI 428 (537)
Q Consensus 363 ----~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~ 428 (537)
.++..++.++.+| .+..||..+.............. ...+.. . .-.++.|. .++++++
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~---~~~~~~-~----~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR---GVAPDA-M----CGNAVMYDAVKGKILT 415 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT---EECCCC-B----TCEEEEEETTTTEEEE
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccc---ccCCCC-C----CCceEeccCCCCeEEE
Confidence 1234445555444 45566666554322111000000 000000 0 12334443 3677888
Q ss_pred EEeCCC-----------cEEEEECCCceeeeEe--ecCCcce-EEEEEecCCCEEEEEeCC-----------CcEEEEEC
Q psy10942 429 SSSGDA-----------TIKLWCLTDYVCLKSL--EGHDASV-LRCHFINKGTQIVSTGAD-----------GLLKLWSI 483 (537)
Q Consensus 429 ~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~~v-~~~~~s~~~~~l~s~~~d-----------g~v~vwd~ 483 (537)
.|+.++ .|.+||..+.+..... ..+.... .+++..|++++++.|+.+ ..+.+||.
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp 495 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP 495 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEG
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcC
Confidence 887532 6788887765443322 2122222 345667899999999854 46899998
Q ss_pred CCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 484 KTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 484 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
.+.+-.. +.....+- .. -... .+.|||+.++.||.
T Consensus 496 ~t~~W~~-~~~~~~~R-~~-------hs~a---~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 496 EQDTFYK-QNPNSIVR-VY-------HSIS---LLLPDGRVFNGGGG 530 (656)
T ss_dssp GGTEEEE-CCCCSSCC-CT-------TEEE---EECTTSCEEEEECC
T ss_pred CCCceee-cCCCCCcc-cc-------ccHh---hcCCCcEEEecCCC
Confidence 7765322 21111000 00 0122 46789999999885
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.06 E-value=0.0062 Score=56.09 Aligned_cols=169 Identities=5% Similarity=-0.052 Sum_probs=93.6
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCceeeEEEE----------ec
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGLKLLNVLR----------GH 362 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~----------~~ 362 (537)
...|+..++.+..... +......+..++|++.++.|+... ..+.|+.+++... .....+. ..
T Consensus 52 ~~~I~~i~~~g~~~~~------~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~-~~~~~~~~~~~~p~glavd 124 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTL------LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS-NVEEVVSTGLESPGGLAVD 124 (349)
T ss_dssp BSCEEEECTTSCCEEE------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEE
T ss_pred ccceEEEeCCCCeeEE------eecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC-CceEEEeCCCCCccEEEEe
Confidence 3457777877654321 112234578999998666666554 5678888988732 2222221 11
Q ss_pred C-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC-C-CcEEEE
Q psy10942 363 K-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG-D-ATIKLW 439 (537)
Q Consensus 363 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d-g~i~i~ 439 (537)
. .+.++++-...+.|.+.++........+..... ....++++|.+..|..... + +.|..+
T Consensus 125 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~-----------------~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 125 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE-----------------KPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS-----------------CEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred cCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC-----------------CcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 1 123333334444555555443221111111111 4577888886665555543 3 678888
Q ss_pred ECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10942 440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTS 486 (537)
Q Consensus 440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~ 486 (537)
++........+.......+.++++|++..|+.+. ..+.|..+++...
T Consensus 188 ~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 188 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp ETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 8764332222222334578999998777666554 4678999998643
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.03 E-value=0.00011 Score=74.55 Aligned_cols=62 Identities=11% Similarity=-0.001 Sum_probs=41.3
Q ss_pred CcEEEEEeCccc-----------eEEeeeccceehhhh--cC--CCcceEEEEEeccccEEEEEeC-CceEEEEeccc
Q psy10942 66 GKTFVLAGGEKS-----------LLHYYETSAVKELYQ--HG--LSSPLVRIVRSSVKRMYAVVTA-DHNISLYRLNS 127 (537)
Q Consensus 66 ~~~~~~~~~~~~-----------~i~~wd~~~~~~~~~--~~--~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~ 127 (537)
++++++.+|.+. .+.+||+.+++-... +. ......++++.++++.+++|+. +..+.+||..+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t 274 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS 274 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcC
Confidence 456666665332 588999988753221 11 1123445778899999999884 45799999887
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.95 E-value=0.013 Score=55.00 Aligned_cols=171 Identities=6% Similarity=-0.075 Sum_probs=96.0
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCc---eeeEEEE---------
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGGL---KLLNVLR--------- 360 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~---~~~~~~~--------- 360 (537)
...|+..++....... +......+..++|++.++.|+... ..+.|+.+++.... .....+.
T Consensus 91 ~~~I~~i~l~~~~~~~------~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 164 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTS------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 164 (400)
T ss_dssp TTEEEEECTTSCSCEE------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred cceeEEEccCCcceeE------eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence 4688888888764321 123345688999998766666554 56788888887311 1111111
Q ss_pred -ecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcE
Q psy10942 361 -GHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATI 436 (537)
Q Consensus 361 -~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i 436 (537)
... .+.++++-...+.|.+.++........+..... ....++++|.+.+|+.... .+.|
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~-----------------~P~~iavdp~~g~ly~td~~~~~~I 227 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKI 227 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC-----------------CEEEEEEETTTTEEEEEECSSSCCE
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC-----------------CcceEEEecccCeEEEEeCCCCCEE
Confidence 111 122333333344444444433222111111111 4677888887666666553 3688
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCe
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTST 487 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~ 487 (537)
...++........+...-...+.|++++++..|+.+. ..+.|..+|++...
T Consensus 228 ~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 228 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred EEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 8888865433333333335678999999877777664 45789999986443
No 275
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.95 E-value=0.00082 Score=61.35 Aligned_cols=149 Identities=7% Similarity=-0.016 Sum_probs=86.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCceee-----------------------------EEEEecCCCCEEEEEc
Q psy10942 322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLL-----------------------------NVLRGHKKGTQIVSTG 372 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-----------------------------~~~~~~~~~~~l~~~~ 372 (537)
...++++++++++++++..++.|..|+... .... ..+...++...++.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPN-SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTT-TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCC-CceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 346788999998788888889999998763 2211 1122222122333333
Q ss_pred CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeC-----------------CC
Q psy10942 373 ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSG-----------------DA 434 (537)
Q Consensus 373 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~-----------------dg 434 (537)
..+.+..+|..+++. ..+ .-...+.. ......+++.+ +|++.++-.. ++
T Consensus 99 ~~~~i~~~d~~~g~~-~~~----------~~~~~~~~--~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQL----------ATSVDGVP--FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp TTTEEEEECTTCEEC-EEE----------ESEETTEE--CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCCEE-EEe----------cccCCCCc--ccccceEEEecCCCEEEEECCcccccccccceehcccCCCc
Confidence 333355565544321 111 10001100 01467788999 8887666432 36
Q ss_pred cEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEE-eCCCcEEEEECCC
Q psy10942 435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST-GADGLLKLWSIKT 485 (537)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~v~vwd~~~ 485 (537)
.|..||..+++....... ......++++|++++|+.+ +..+.|.+|++..
T Consensus 166 ~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 166 RLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred eEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 788889876654332222 2345779999999866655 5568899999864
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.0066 Score=57.68 Aligned_cols=180 Identities=8% Similarity=0.032 Sum_probs=96.4
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-C----cEEEEEccCCceeeEEEE-
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-K----TVKVWSTTGGLKLLNVLR- 360 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~----~i~i~d~~~~~~~~~~~~- 360 (537)
.|......+.|+.+|+.++.... +.........++|+++++.|+++... + .+..++..........+.
T Consensus 151 ~Lyv~d~~~~I~~id~~~~~v~~------~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~ 224 (430)
T 3tc9_A 151 HLYLVGEQHPTRLIDFEKEYVST------VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTK 224 (430)
T ss_dssp EEEEEEBTEEEEEEETTTTEEEE------EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE
T ss_pred eEEEEeCCCcEEEEECCCCEEEE------EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeecc
Confidence 34444444788899988765321 11234567899999999966666542 2 344445442222112222
Q ss_pred --------ecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe
Q psy10942 361 --------GHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS 431 (537)
Q Consensus 361 --------~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (537)
.++ ++.++++-..++.|..++...+...... ..+.. .....++|+|++++|....
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-----------~~~~~-----~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-----------TIQDS-----GWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-----------ECSSS-----SCCEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------EcCCC-----CcceeEEEcCCCCEEEEEE
Confidence 233 3455555555667777776654431111 11111 1466799999999555554
Q ss_pred -CCCcEEEEECCC--cee--eeEeecC---------------CcceE-EEEEe--------cCCCEEEEEeCCCcEEEEE
Q psy10942 432 -GDATIKLWCLTD--YVC--LKSLEGH---------------DASVL-RCHFI--------NKGTQIVSTGADGLLKLWS 482 (537)
Q Consensus 432 -~dg~i~i~d~~~--~~~--~~~~~~~---------------~~~v~-~~~~s--------~~~~~l~s~~~dg~v~vwd 482 (537)
.++.|..++... ++. +..+.+. -.... .++.. +++.++++-...+.|+.++
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 567898887653 221 1222211 01123 45543 3355555555667889888
Q ss_pred CCCCeeE
Q psy10942 483 IKTSTCV 489 (537)
Q Consensus 483 ~~~~~~~ 489 (537)
.+|+..
T Consensus 369 -~~G~v~ 374 (430)
T 3tc9_A 369 -PQGRVT 374 (430)
T ss_dssp -TTSEEE
T ss_pred -CCCcEE
Confidence 456544
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.87 E-value=0.001 Score=68.38 Aligned_cols=148 Identities=11% Similarity=0.023 Sum_probs=84.4
Q ss_pred CeEEEEEc-CCCCEEEEEeC-CC----cEEEEEccCC-cee---eE----EEEecCCCCEEEEEcCC-----CcEEEEEC
Q psy10942 322 DINCVTVS-PNDKLLASGSL-DK----TVKVWSTTGG-LKL---LN----VLRGHKKGTQIVSTGAD-----GLLKLWSI 382 (537)
Q Consensus 322 ~v~~~~~s-~~~~~l~~~~~-d~----~i~i~d~~~~-~~~---~~----~~~~~~~~~~l~~~~~d-----~~i~i~d~ 382 (537)
.+...+|| |||++|+.+.. +| .|+++|+.++ ... +. .+...++++.|+....+ ..|.++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 57889999 99998886543 22 4999999844 211 11 12334567666665544 25667777
Q ss_pred CCCee--eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC---CCcEEEEECCCc--ee--eeEeecC
Q psy10942 383 KTSTC--VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG---DATIKLWCLTDY--VC--LKSLEGH 453 (537)
Q Consensus 383 ~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~--~~--~~~~~~~ 453 (537)
.+++. ...+.. ++.. ....+.|||||++|+.... ...|.++|+.++ +. .......
T Consensus 255 gt~~~~~~lv~~~-----------~~~~-----~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~ 318 (751)
T 2xe4_A 255 GKLQSEDVCLYEE-----------HNPL-----FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE 318 (751)
T ss_dssp TSCGGGCEEEEEC-----------CCTT-----CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC
T ss_pred CCCchhcEEEEec-----------CCCc-----eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC
Confidence 66532 111111 1111 2346788999988887653 346888898875 22 2222333
Q ss_pred CcceEEEEEecCCCEEEEEeCC----CcEEEEECCC
Q psy10942 454 DASVLRCHFINKGTQIVSTGAD----GLLKLWSIKT 485 (537)
Q Consensus 454 ~~~v~~~~~s~~~~~l~s~~~d----g~v~vwd~~~ 485 (537)
.+...++.|+.++.+++....+ ..|..+++.+
T Consensus 319 ~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 319 KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 4455566655444444444443 2566677654
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.87 E-value=0.015 Score=52.72 Aligned_cols=177 Identities=8% Similarity=-0.053 Sum_probs=93.2
Q ss_pred CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCC---ceeeEEEEec-CCCCEEE
Q psy10942 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGG---LKLLNVLRGH-KKGTQIV 369 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~---~~~~~~~~~~-~~~~~l~ 369 (537)
..|+..++.+...... .........++|+++++.|+.+ ..++.|..+++... ......+... ....-++
T Consensus 10 ~~I~~i~~~~~~~~~~------~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSL------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (316)
T ss_dssp SSEEEEETTSCCCEEE------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred CeEEEEECCCcceEeh------hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence 5688899887653221 1223457899999876655555 45688999998731 1212222111 1112233
Q ss_pred EEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEEEEECCCceee
Q psy10942 370 STGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIKLWCLTDYVCL 447 (537)
Q Consensus 370 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~d~~~~~~~ 447 (537)
....++.+++-|...+... .+.........+ ..... .....++++|.+..|+..... +.|..+++.. ...
T Consensus 84 vd~~~~~ly~~d~~~~~I~-~~~~~g~~~~~~-~~~~~-----~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~ 155 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVS-VADTKGVKRKTL-FRENG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDI 155 (316)
T ss_dssp EETTTTEEEEEETTTTEEE-EEETTSSSEEEE-EECTT-----CCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCE
T ss_pred EeecCCeEEEEECCCCEEE-EEeCCCCceEEE-EECCC-----CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCe
Confidence 3223444444443332211 111111111111 11111 156788899876666555543 6788888754 333
Q ss_pred eEe-ecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10942 448 KSL-EGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKT 485 (537)
Q Consensus 448 ~~~-~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~ 485 (537)
..+ ...-...+.+++++++..|+.+. ..+.|..+|+..
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 333 22334578999999877776555 457899999864
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.83 E-value=0.0096 Score=53.70 Aligned_cols=183 Identities=9% Similarity=-0.041 Sum_probs=98.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcee-------eEEEEecCCCCEEEEEcCC--CcEEEEECCCCeeeeee
Q psy10942 321 KDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL-------LNVLRGHKKGTQIVSTGAD--GLLKLWSIKTSTCVSTF 391 (537)
Q Consensus 321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~ 391 (537)
.....++|+++++++++-..++.|..||....... ...+...+++.++++.... ..|..+|..+++.....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE
Confidence 34678999999987777667888998887632111 1123334455554444332 23555565555432211
Q ss_pred ccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee-eeEee---------cCCcceEEEE
Q psy10942 392 DKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC-LKSLE---------GHDASVLRCH 461 (537)
Q Consensus 392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~---------~~~~~v~~~~ 461 (537)
.. +... ....++..+++..+++-..++.|+.+|...++. +.... ......+.+
T Consensus 112 ~~-----------~~~~-----~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 112 TL-----------PDAI-----FLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EC-----------TTCS-----CEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eC-----------CCcc-----ccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 11 1111 123344455555455444578899999875421 11110 111234555
Q ss_pred EecCCCEEEEEe-CCCcEEEEECCC-Cee--EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEEe
Q psy10942 462 FINKGTQIVSTG-ADGLLKLWSIKT-STC--VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVVV 536 (537)
Q Consensus 462 ~s~~~~~l~s~~-~dg~v~vwd~~~-~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~v 536 (537)
+|++++|+.+. ..+.|..+++.. ++. ...+.. .... ..+ ++.++|+++++....+.|.+
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P-----------~gi---~vd~dG~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNI-----------DDF---AFDVEGNLYGATHIYNSVVR 237 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCC-----------SSE---EEBTTCCEEEECBTTCCEEE
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCC-----------CCe---EECCCCCEEEEeCCCCeEEE
Confidence 88887666554 567899999864 321 111110 0112 566 89999987666555566654
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.75 E-value=0.023 Score=51.41 Aligned_cols=171 Identities=8% Similarity=-0.009 Sum_probs=94.0
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEe----------c
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRG----------H 362 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~----------~ 362 (537)
...|+..++.+.......+. .......+++|++.++.|+.. ...+.|..+++.........+.. .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~----~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd 87 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVV----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACD 87 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEE----EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEEe----cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEE
Confidence 46788999887642111111 112346789999865555544 45678999998743211111111 1
Q ss_pred -CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcEEEE
Q psy10942 363 -KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATIKLW 439 (537)
Q Consensus 363 -~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~ 439 (537)
..+..+++-...+.|.++++........+..... ....++++|.+..|+.... .+.|...
T Consensus 88 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~-----------------~P~giavdp~~g~ly~td~~~~~~I~r~ 150 (318)
T 3sov_A 88 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD-----------------QPRAIALDPSSGFMYWTDWGEVPKIERA 150 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-----------------SEEEEEEEGGGTEEEEEECSSSCEEEEE
T ss_pred cCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC-----------------CccEEEEeCCCCEEEEEecCCCCEEEEE
Confidence 1223333334445555555543221111111111 4567888887666666553 5788888
Q ss_pred ECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10942 440 CLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKT 485 (537)
Q Consensus 440 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~ 485 (537)
++............-...+.++++|++..|+.+. ..+.|..++++.
T Consensus 151 ~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 8764322222222234568999999777666554 467899999864
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.74 E-value=0.01 Score=56.39 Aligned_cols=179 Identities=8% Similarity=-0.025 Sum_probs=97.8
Q ss_pred EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEccCCce---eeEE-
Q psy10942 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-----TVKVWSTTGGLK---LLNV- 358 (537)
Q Consensus 288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~~---~~~~- 358 (537)
|..+...+.|+.++..++.... +.........++++++|+ |+.+...+ .+...+...... .+..
T Consensus 155 Lyv~D~~~~I~~id~~~g~v~~------~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 227 (433)
T 4hw6_A 155 LYWVGQRDAFRHVDFVNQYVDI------KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNA 227 (433)
T ss_dssp EEEECBTSCEEEEETTTTEEEE------ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEEC
T ss_pred EEEEeCCCCEEEEECCCCEEEE------eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccccc
Confidence 3333333788888887665321 122344578999999999 55444321 233333331211 1111
Q ss_pred -----EEecC-CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-
Q psy10942 359 -----LRGHK-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS- 431 (537)
Q Consensus 359 -----~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 431 (537)
+..++ ++.++++-..++.|+.+|..++.....+.... +.. ....++|+|++++|..+.
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~---------~~~------~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD---------TKG------SNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS---------CCS------SCEEEEECTTSSEEEEEET
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC---------CCC------CcccEEEeCCCCEEEEEeC
Confidence 22233 45555555566777777777665422211000 000 224689999998655554
Q ss_pred CCCcEEEEECC--Ccee--eeEeecC---------------CcceEEEEE---------ecCCCEEEEEeCCCcEEEEEC
Q psy10942 432 GDATIKLWCLT--DYVC--LKSLEGH---------------DASVLRCHF---------INKGTQIVSTGADGLLKLWSI 483 (537)
Q Consensus 432 ~dg~i~i~d~~--~~~~--~~~~~~~---------------~~~v~~~~~---------s~~~~~l~s~~~dg~v~vwd~ 483 (537)
..+.|+.++.. ++.. ...+.+. -.....+++ .+++.++++-...+.|+.++.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 46789998765 2221 1122211 123567899 667776666667788999985
Q ss_pred CCCeeE
Q psy10942 484 KTSTCV 489 (537)
Q Consensus 484 ~~~~~~ 489 (537)
+|...
T Consensus 373 -~G~v~ 377 (433)
T 4hw6_A 373 -EGRVT 377 (433)
T ss_dssp -TSEEE
T ss_pred -CCCEE
Confidence 66543
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.73 E-value=0.022 Score=53.20 Aligned_cols=183 Identities=10% Similarity=-0.107 Sum_probs=97.7
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEEccCCceeeEEE------
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS-GSLDKTVKVWSTTGGLKLLNVL------ 359 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~------ 359 (537)
++++-...+.|..++..+..... + ..........+++++.+..|+. -...+.|.+.++... .....+
T Consensus 130 ly~~D~~~~~I~r~~~~g~~~~~-~----~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~-~~~~l~~~~l~~ 203 (386)
T 3v65_B 130 VFWSDVTLDRILRANLNGSNVEE-V----VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKVLLWQSLEK 203 (386)
T ss_dssp EEEEETTTTEEEEEETTSCCEEE-E----ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC-SCEEEECSSCSC
T ss_pred EEEEeCCCCcEEEEecCCCCcEE-E----EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC-ceEEeecCCCCC
Confidence 45555566788888887654211 1 1111233467888876555544 445677888887632 211111
Q ss_pred ----EecCCCCEE-EEEcCC-CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C
Q psy10942 360 ----RGHKKGTQI-VSTGAD-GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G 432 (537)
Q Consensus 360 ----~~~~~~~~l-~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~ 432 (537)
..++.+..| ++-... +.|..+++............. .....++++|++..|..+. .
T Consensus 204 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-----------------~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 204 PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-----------------FWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-----------------SCEEEEEEEGGGTEEEEEETT
T ss_pred CcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC-----------------CCeeeEEEeCCCCEEEEEECC
Confidence 122222222 222222 344444433221111111000 1467899998776666655 4
Q ss_pred CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942 433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493 (537)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 493 (537)
.+.|..+|+........+.........+++. .+.++++-...+.|..++..+|+.+..+.
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 5789999986543333333334456778883 44555666667889999876776665554
No 283
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.71 E-value=0.023 Score=50.24 Aligned_cols=237 Identities=11% Similarity=0.083 Sum_probs=138.1
Q ss_pred cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942 236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315 (537)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 315 (537)
.+|..+.+|.-. ...+. +++++.........+..++.-+.+-.. +.++..+ +..|+-|+++....+.+.+.+.
T Consensus 74 MnP~~~ViALra-g~~LQ--iFnletK~klks~~~~e~VvfWkWis~---~~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQ--IFNIEMKSKMKAHTMTDDVTFWKWISL---NTVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp ECSSSSEEEEEE-TTEEE--EEETTTTEEEEEEECSSCEEEEEECSS---SEEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eCCCccEEEEec-CCeEE--EechHHhhhhcceecCCccEEEEecCC---CeEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 467766666544 56788 999988433322223222333333332 2333332 4689999998755554444443
Q ss_pred ccccCCCeEEEEEcCCCCEEEEEeC-------CCcEEEEEccCCceeeEEEEecCC------------CC-EEEEEcC--
Q psy10942 316 KKGHEKDINCVTVSPNDKLLASGSL-------DKTVKVWSTTGGLKLLNVLRGHKK------------GT-QIVSTGA-- 373 (537)
Q Consensus 316 ~~~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~------------~~-~l~~~~~-- 373 (537)
-.-....|..-..+++.++++..+- .|.+.+|..+ .+.-+.+.+|.. .. .++-+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3333567888888999998776442 3678888887 333344444421 12 2222222
Q ss_pred -CCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942 374 -DGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE 451 (537)
Q Consensus 374 -d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 451 (537)
.+++++.++... ..- .........+.+.|+... .-..++..|+....+..-+.-|.|++||+.++.++..-+
T Consensus 225 ~g~kLhIiEi~~~~~~~---~~f~kk~vdi~fppea~~---DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEAQN---DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp TEEEEEEEECSSCCTTC---CCCCCEEEEECCCTTCTT---CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEEEcCCCCCCC---CCcccccceeeCCccccC---CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 257888887432 110 111122334444443211 135667888888888888999999999999999998877
Q ss_pred cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
-..+.|..-+-+....=++.....|.|.--.++...
T Consensus 299 IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 299 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred cCCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 666777655555544445555566666655554443
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.70 E-value=0.014 Score=52.52 Aligned_cols=181 Identities=15% Similarity=0.232 Sum_probs=111.8
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC----CC---EEEEEeC---CCcEEEEEccCCceee
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN----DK---LLASGSL---DKTVKVWSTTGGLKLL 356 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~---~l~~~~~---d~~i~i~d~~~~~~~~ 356 (537)
+++.....+-+.+||+ +++.+.. +. .+.++.+..-|+ |+ ++++... +++|.+|++......+
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~-----~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHS-----YN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEE-----EC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEE-----cc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 4666667789999999 5554332 22 145666666552 22 2333333 5789999774111122
Q ss_pred EEE--------------------EecCCCC-EEEEEcCCCcEEEEECC---C----CeeeeeeccCCcceEEEEEecCCC
Q psy10942 357 NVL--------------------RGHKKGT-QIVSTGADGLLKLWSIK---T----STCVSTFDKHALKIWTLAITKDEN 408 (537)
Q Consensus 357 ~~~--------------------~~~~~~~-~l~~~~~d~~i~i~d~~---~----~~~~~~~~~~~~~i~~~~~~~~~~ 408 (537)
..+ +....+. ++++...+|.+..|++. . .+.++++....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs------------- 180 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS------------- 180 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-------------
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-------------
Confidence 222 1111232 57777778888888773 2 23444444332
Q ss_pred ceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECC-----CceeeeEee-cC-CcceEEEEEe--cCCC-EEEEEe-CCCc
Q psy10942 409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLT-----DYVCLKSLE-GH-DASVLRCHFI--NKGT-QIVSTG-ADGL 477 (537)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~s--~~~~-~l~s~~-~dg~ 477 (537)
.+..+...+....|+.+-++..|..++.. +++.+..+. ++ ...+..|++- ++++ +|++++ .+++
T Consensus 181 -----q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 181 -----QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp -----CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred -----CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 56778888888899999998777777755 345555442 22 2368888884 5555 666666 5679
Q ss_pred EEEEECC-CCeeEEEec
Q psy10942 478 LKLWSIK-TSTCVSTFD 493 (537)
Q Consensus 478 v~vwd~~-~~~~~~~~~ 493 (537)
..+||.+ +.+.+..+.
T Consensus 256 ~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 256 YAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEESSTTCCEEEEEE
T ss_pred EEEEECCCCCcEEEEEE
Confidence 9999996 677777775
No 285
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.69 E-value=0.024 Score=50.06 Aligned_cols=120 Identities=12% Similarity=0.173 Sum_probs=77.3
Q ss_pred cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEE
Q psy10942 23 GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRI 102 (537)
Q Consensus 23 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~ 102 (537)
+++..|.|-|+.+...+.+.| +.+=+.+..| ..+.++.-. ...|.++|+++.+.+.....++.|.--
T Consensus 46 ~~~~~VvIiDl~n~~~~~Rrp----i~AdsAIMnP--------~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfW 112 (365)
T 2xzh_A 46 GEQAQVVIIDMNDPSNPIRRP----ISADSAIMNP--------ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW 112 (365)
T ss_dssp TTEEEEEEEETTSTTSCEEEE----CCCSEEEECS--------SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CCCCEEEEEECCCCCCccccc----cccceeeeCC--------CccEEEEec-CCeEEEechHHhhhhcceecCCccEEE
Confidence 344578889998877664433 3332235567 445555443 577999999999999999988999888
Q ss_pred EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh----hhhhhhcccCCCccEEEe
Q psy10942 103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD----EILDIALLGEEDSHIVVA 168 (537)
Q Consensus 103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~~ 168 (537)
.|-.+. .|+..+. ..|+-|++.+. ..+.+.+..|.. .|..-.-+ ++.+.+++.
T Consensus 113 kWis~~-~L~lVT~-taVyHWs~~~~----------s~P~kvFdR~~~L~~~QIInY~~d-~~~kW~~l~ 169 (365)
T 2xzh_A 113 KWISLN-TVALVTD-NAVYHWSMEGE----------SQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLLT 169 (365)
T ss_dssp EECSSS-EEEEEES-SEEEEEESSTT----------CCCEEEEECCGGGTTCEEEEEEEC-TTSCEEEEE
T ss_pred EecCCC-eEEEEcC-CcEEEEcccCC----------CCCceeeecchhcccceEEEEEEC-CCCCEEEEE
Confidence 886554 3444444 57999999863 355666666544 23333444 455555443
No 286
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.67 E-value=0.0016 Score=56.27 Aligned_cols=110 Identities=13% Similarity=0.183 Sum_probs=74.6
Q ss_pred eeeeeeeeccCCcc-eEEEecCcceEEEEEcCccceeeeeccc--cccceeeeEeecCccccccCCcEEEEEeCccceEE
Q psy10942 4 CVTCFDVIPQITSE-FSVHCGRDKVLFTWDLSSRKQLRSYPAY--ESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLH 80 (537)
Q Consensus 4 ~V~~~~~~~~~~~~-~l~s~~~~g~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 80 (537)
.+..+++. ++++ ++++..+++.|...|.+ ++.++.++.. ...+.+ .+.+ ++.++++.-.++.+.
T Consensus 28 ~lSGla~~--~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI--a~~~--------~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 28 NISSLTWS--AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETI--EYIG--------DNQFVISDERDYAIY 94 (255)
T ss_dssp CEEEEEEE--TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEE--EECS--------TTEEEEEETTTTEEE
T ss_pred CcceeEEe--CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHe--EEeC--------CCEEEEEECCCCcEE
Confidence 57889999 5555 44456778999999988 8888888643 455666 5566 556766665667788
Q ss_pred eeeccceeh---hhh-------cCCCcceEEEEEeccccEEEEEeCCceEEEEecc
Q psy10942 81 YYETSAVKE---LYQ-------HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLN 126 (537)
Q Consensus 81 ~wd~~~~~~---~~~-------~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 126 (537)
++++..... +.. .........++|+|+++.|.++.......+|.++
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 887654321 111 1223467999999999887777765556666665
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.57 E-value=0.047 Score=55.90 Aligned_cols=172 Identities=6% Similarity=-0.089 Sum_probs=94.4
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCc---eeeEEEE---------
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGL---KLLNVLR--------- 360 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~---~~~~~~~--------- 360 (537)
...|+..++....... +......+..|+|++....|+.. ...+.|+.+++.... .....+.
T Consensus 403 ~~~Ir~i~l~~~~~~~------l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GL 476 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTS------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 476 (791)
T ss_dssp BSSEEEECTTSCCCEE------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred ccceeEeeccCCccee------eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCccee
Confidence 3567777776554211 12234567899999865555544 456778888887321 1122222
Q ss_pred -ecCC-CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcE
Q psy10942 361 -GHKK-GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATI 436 (537)
Q Consensus 361 -~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i 436 (537)
.... +.++++-...+.|.+.++........+..... ....|+++|.+.+|+.... .+.|
T Consensus 477 AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~-----------------~P~gIaVDp~~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKI 539 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----------------CEEEEEEETTTTEEEEEECSSSCEE
T ss_pred eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC-----------------CcceEEEecCCCCEEEecCCCCCeE
Confidence 1111 23333333444555555443222111111111 4677888887666666653 2678
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-ADGLLKLWSIKTSTC 488 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~vwd~~~~~~ 488 (537)
...++........+.......+.|++++.+..|+.+. ..+.|...++.....
T Consensus 540 ~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 8888865444333333345688999998777776664 456799999854433
No 288
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.50 E-value=0.059 Score=49.71 Aligned_cols=237 Identities=11% Similarity=0.082 Sum_probs=139.5
Q ss_pred cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942 236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315 (537)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 315 (537)
.+|..+.+|.-. ..++. +++++.........+..++.-+.+-+. +.++.. .+..|+-|++.+...+.+.+.+.
T Consensus 73 MnP~~~iiALra-g~~lQ--iFnle~K~klks~~~~e~VvfWkWis~---~~l~lV-T~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQ--IFNIEMKSKMKAHTMTDDVTFWKWISL---NTVALV-TDNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp ECSSSSCEEEEE-TTEEE--EEETTTTEEEEEEECSSCCCEEEEEET---TEEEEE-CSSEEEEEESSSSCCCEEEEECC
T ss_pred eCCCCcEEEEec-CCeEE--EEchHHhhhhcceecCCCceEEEecCC---CeEEEE-cCCeeEEecccCCCCchhheecc
Confidence 466666666544 57788 999988433333333333333333333 233333 25689999998755544443433
Q ss_pred ccccCCCeEEEEEcCCCCEEEEEeC-------CCcEEEEEccCCceeeEEEEecCC-------------CCEEEEEcC--
Q psy10942 316 KKGHEKDINCVTVSPNDKLLASGSL-------DKTVKVWSTTGGLKLLNVLRGHKK-------------GTQIVSTGA-- 373 (537)
Q Consensus 316 ~~~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~-------------~~~l~~~~~-- 373 (537)
-.-....|..-..+++.++++..+- .|.+.+|..+ .+.-+.+.+|.. ...++-+..
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--ccccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3333567888888999998775432 3678888887 333333444321 123333333
Q ss_pred -CCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942 374 -DGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE 451 (537)
Q Consensus 374 -d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 451 (537)
.+++++.++... ..- .........+.+.|+... .-..++..|+....+..-..-|.|++||+.++.++..-+
T Consensus 224 ~g~kLhi~Ei~~~~~~~---~~f~kk~vdv~fppe~~~---DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEAQN---DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp TCCEEEEEECSCCCTTC---CCCCCEEEECCCCTTSTT---CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEEEcCCCccCC---CCccceeeeeeCCccccc---CceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 378888887532 100 111112333344443211 035668888888888888999999999999999998877
Q ss_pred cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy10942 452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487 (537)
Q Consensus 452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~ 487 (537)
-....|...+-.....=++.....|.|.--.++...
T Consensus 298 Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred ccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 666777665555554555555567766655555443
No 289
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.50 E-value=0.0034 Score=59.66 Aligned_cols=107 Identities=8% Similarity=0.014 Sum_probs=63.7
Q ss_pred eeeEEEEcCCCCEEEEEeC-CC----cEEEEECCCceee--eEeecCCcceEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10942 414 GVWFVNFSPLDRILISSSG-DA----TIKLWCLTDYVCL--KSLEGHDASVLRCHFIN-KGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~-dg----~i~i~d~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~vwd~~~ 485 (537)
....++|++++++|+++.. ++ .+.+++. .+... ..+.. ......++++| ++.++++-..++.|+.++...
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 5678899999986666554 22 2333443 22221 22322 23457788999 677666666778999999987
Q ss_pred CeeEEEecCCc-cceeccCCCCCCccccccceeeecCCCEEEEEeC-CCCEEe
Q psy10942 486 STCVSTFDKHA-LKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW-SPQVVV 536 (537)
Q Consensus 486 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~-dg~i~v 536 (537)
+.......... ... ..+ +|+|+|++|+.+.. .+.|..
T Consensus 258 ~~~~~~~~~~~~~~P-----------~gi---a~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 258 QETTPLFTIQDSGWE-----------FHI---QFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp TEEEEEEECSSSSCC-----------EEE---EECTTSSEEEEEETTTTEEEE
T ss_pred CcEEEEEEcCCCCcc-----------eeE---EEcCCCCEEEEEECCCCEEEE
Confidence 65422221111 122 667 99999996666543 444543
No 290
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.49 E-value=0.061 Score=49.40 Aligned_cols=184 Identities=10% Similarity=-0.095 Sum_probs=98.4
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceee---------
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLL--------- 356 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~--------- 356 (537)
++.+-...+.|..+++.+..... ...........+++.+.+..| ++-...+.|.+.++.......
T Consensus 87 ly~~D~~~~~I~r~~~~g~~~~~-----~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P 161 (349)
T 3v64_C 87 VFWSDVTLDRILRANLNGSNVEE-----VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKP 161 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEE-----EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCE
T ss_pred EEEEeccCCceEEEecCCCCceE-----EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCc
Confidence 44455566778888877654211 111122345788999855555 444556789999887322111
Q ss_pred EEEEecCC-CCEEEEEcCC-CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CC
Q psy10942 357 NVLRGHKK-GTQIVSTGAD-GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GD 433 (537)
Q Consensus 357 ~~~~~~~~-~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d 433 (537)
..+..++. +..+++-... +.|..+++............. .....++++|++..|..+. ..
T Consensus 162 ~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-----------------~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 162 RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-----------------FWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC-----------------SCEEEEEEETTTTEEEEEETTT
T ss_pred ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC-----------------CCcceEEEeCCCCEEEEEECCC
Confidence 11222222 2222222222 444444443221111111000 1467899998777666665 45
Q ss_pred CcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942 434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493 (537)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 493 (537)
+.|..+|+........+.........+++. .+.++++-...+.|..++..+|+....+.
T Consensus 225 ~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 225 HVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 789999987533333333334456778883 44555555567888888866776555543
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.45 E-value=0.028 Score=50.58 Aligned_cols=177 Identities=12% Similarity=0.158 Sum_probs=102.8
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeEEEEecC------------CCC---E-EEEEcC--CCcEEEEECC--CCeeeeee
Q psy10942 332 DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK------------KGT---Q-IVSTGA--DGLLKLWSIK--TSTCVSTF 391 (537)
Q Consensus 332 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~~---~-l~~~~~--d~~i~i~d~~--~~~~~~~~ 391 (537)
..+++.....+-+.+||+. ++.+..+.... .+. + +++... +++|.+|++. +++ +..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl~--G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD--GKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEETT--SCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred ccEEEEEcCCCCEEEEcCC--CcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 3456666667789999995 44444443211 111 2 233333 5789999773 332 3333
Q ss_pred ccCCcceEEEEEecCCCceEEeeeeEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CceeeeEeecCCcceEEE
Q psy10942 392 DKHALKIWTLAITKDENQIITGGVWFVNF--SPL-DR-ILISSSGDATIKLWCLT-------DYVCLKSLEGHDASVLRC 460 (537)
Q Consensus 392 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~--s~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~v~~~ 460 (537)
.....++ . ... ..+..+|+ +|. ++ ++++...+|.+..|++. +.+.++++.. .+.+-.|
T Consensus 117 ~~~~~pv-----~-t~~----~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~Egc 185 (355)
T 3amr_A 117 TDPDHPI-----A-TAI----NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGM 185 (355)
T ss_dssp SCTTSCE-----E-CCC----SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEE
T ss_pred cccccCc-----C-CCC----CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceE
Confidence 2210011 0 000 04555666 674 43 67778888999999882 3466777774 4568899
Q ss_pred EEecCCCEEEEEeCCCcEEEEECC-----CCeeEEEec-CCc-cceeccCCCCCCccccccceee--ecCCC-EEEEEe-
Q psy10942 461 HFINKGTQIVSTGADGLLKLWSIK-----TSTCVSTFD-KHA-LKIRNSDSENDHKGFGLPRQLC--SRNSD-CEYRGG- 529 (537)
Q Consensus 461 ~~s~~~~~l~s~~~dg~v~vwd~~-----~~~~~~~~~-~~~-~~i~~~~~~~~~~~~~~~~~~~--s~~~~-~l~s~~- 529 (537)
...+....|+.+-++.-|..++.+ +++.+..+. ++- ..+ ..| ++ .++++ +|++++
T Consensus 186 vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDv-----------EGL---ai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 186 AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDI-----------EGL---TIYYAADGKGYLMASSQ 251 (355)
T ss_dssp EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCE-----------EEE---EEEECGGGCEEEEEEEG
T ss_pred EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCc-----------ceE---EEEecCCCCEEEEEEcC
Confidence 999988999999998777667754 355665542 211 134 455 55 56666 666665
Q ss_pred CCCCEEe
Q psy10942 530 WSPQVVV 536 (537)
Q Consensus 530 ~dg~i~v 536 (537)
.+.+..|
T Consensus 252 G~~s~~V 258 (355)
T 3amr_A 252 GNSSYAI 258 (355)
T ss_dssp GGTEEEE
T ss_pred CCCEEEE
Confidence 3444443
No 292
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.44 E-value=0.073 Score=49.13 Aligned_cols=119 Identities=12% Similarity=0.172 Sum_probs=76.2
Q ss_pred cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEE
Q psy10942 23 GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRI 102 (537)
Q Consensus 23 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~ 102 (537)
+++..|.|-|+.++..+.+.| +.+=+.+..| ..+.++.=. ...|.++|+++.+.+.....++.|.--
T Consensus 45 ~~~~~vvIiDl~~~~~~~rrp----i~AdsAIMnP--------~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfW 111 (494)
T 1bpo_A 45 GEQAQVVIIDMNDPSNPIRRP----ISADSAIMNP--------ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW 111 (494)
T ss_dssp TTCCEEEEEETTSTTSCEEEE----CCCSEEEECS--------SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred CCCCeEEEEECCCCCcceecc----cccceeeeCC--------CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEE
Confidence 344578888988877664433 3332335567 334444433 678999999999999998888888888
Q ss_pred EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecchh----hhhhhhcccCCCccEEE
Q psy10942 103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGFSD----EILDIALLGEEDSHIVV 167 (537)
Q Consensus 103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~ 167 (537)
.|-.+. .|+..+. ..|+-|++.+. ..+.+.+..|.. .|..-.-+ ++.+.+++
T Consensus 112 kWis~~-~l~lVT~-taVyHWsi~~~----------s~P~kvFdR~~~L~~~QIInY~~d-~~~kW~~l 167 (494)
T 1bpo_A 112 KWISLN-TVALVTD-NAVYHWSMEGE----------SQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLL 167 (494)
T ss_dssp EEEETT-EEEEECS-SEEEEEESSSS----------CCCEEEEECCGGGTTCEEEEEEEC-TTSSEEEE
T ss_pred EecCCC-eEEEEcC-CeeEEecccCC----------CCchhheecchhcccceEEEEEEC-CCCCeEEE
Confidence 885544 3444444 67999999763 355666666644 23333444 45555543
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.43 E-value=0.0017 Score=66.76 Aligned_cols=112 Identities=7% Similarity=0.014 Sum_probs=70.2
Q ss_pred eEEEEec-CCCCEEEEEcC-C----CcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEE
Q psy10942 356 LNVLRGH-KKGTQIVSTGA-D----GLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI 428 (537)
Q Consensus 356 ~~~~~~~-~~~~~l~~~~~-d----~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 428 (537)
+...... ++|+.++.... + .+|+++|+.++ +.+.. .+. .....++|+||++.|+
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~------~~~-------------~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD------KVS-------------GTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC------CEE-------------EECSCCEECSSTTEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc------ccc-------------CceeeEEEecCCCEEE
Confidence 3445566 77776664332 2 35999999988 53210 010 0234577999998887
Q ss_pred EEeCC-----CcEEEEECCCcee--eeEee-cCCcceEEEEEecCCCEEEEEeC---CCcEEEEECCCC
Q psy10942 429 SSSGD-----ATIKLWCLTDYVC--LKSLE-GHDASVLRCHFINKGTQIVSTGA---DGLLKLWSIKTS 486 (537)
Q Consensus 429 ~~~~d-----g~i~i~d~~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~s~~~---dg~v~vwd~~~~ 486 (537)
....+ ..|+.+++.+++. ...+. ........+.|||||++|+..+. ...|+++|+.++
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 77654 2588888877542 22332 22334678899999999886653 345888898765
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.31 E-value=0.083 Score=47.14 Aligned_cols=156 Identities=8% Similarity=0.043 Sum_probs=92.6
Q ss_pred eEEEEEcCCCCEEEEEe-CCCcEEEEEccCCc-e---------------eeEEEEe---cCCCCEEEEEc----------
Q psy10942 323 INCVTVSPNDKLLASGS-LDKTVKVWSTTGGL-K---------------LLNVLRG---HKKGTQIVSTG---------- 372 (537)
Q Consensus 323 v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~-~---------------~~~~~~~---~~~~~~l~~~~---------- 372 (537)
-.+++|++....|+.++ ..+.|..|+..... . ...-+.. .+.+.++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 35678887655666655 68999999886221 1 1122333 34445555432
Q ss_pred ---CCCcEEEEECC---CCeeeeeeccC--CcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC-CcEEEEECCC
Q psy10942 373 ---ADGLLKLWSIK---TSTCVSTFDKH--ALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD-ATIKLWCLTD 443 (537)
Q Consensus 373 ---~d~~i~i~d~~---~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~i~d~~~ 443 (537)
.+..+..||+. +++.+....-. ...+. ...+.. .+....++..++|+..++++.. +.|..++...
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~----~~~g~~--~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE----KKAGKR--PFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH----HHHSSC--CEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc----cccccc--ccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 15667888887 66655433211 00000 000000 0157788888888888888777 7777776543
Q ss_pred ceeeeEee------cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 444 YVCLKSLE------GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 444 ~~~~~~~~------~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
. .+..+. ......+.|+++|+++.|++....|.+..+|+.+
T Consensus 169 ~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 K-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp C-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred C-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2 222221 1112367999999999999887799999999874
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.31 E-value=0.11 Score=49.67 Aligned_cols=199 Identities=8% Similarity=-0.005 Sum_probs=100.8
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE-------cCCCCEEEEEeCCC-------cEEEEEccCC
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV-------SPNDKLLASGSLDK-------TVKVWSTTGG 352 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~d~-------~i~i~d~~~~ 352 (537)
++++....+.|++.|++++...... ..-.........++| +++++.|+++...+ .|.+++....
T Consensus 154 Lyv~~~~~~~i~~ID~~~~~v~~l~--~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 154 LYICYDGHKAIQLIDLKNRMLSSPL--NINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEETEEEEEEEETTTTEEEEEE--CCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred EEEEECCCCeEEEEECCCCEEEEEE--ccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 3444444567888898876543211 111112335899999 99999777766554 2666654421
Q ss_pred ce--------eeEEE------EecC-CCCEEEEEcCCCcEEEEECC-------CCeeeeee-ccCCcceEEEEEecCCCc
Q psy10942 353 LK--------LLNVL------RGHK-KGTQIVSTGADGLLKLWSIK-------TSTCVSTF-DKHALKIWTLAITKDENQ 409 (537)
Q Consensus 353 ~~--------~~~~~------~~~~-~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~-~~~~~~i~~~~~~~~~~~ 409 (537)
+. .+..+ ..++ ++.++++-..++.|..+|+. ++..-... .........+...+++.
T Consensus 232 G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~- 310 (496)
T 3kya_A 232 GTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS- 310 (496)
T ss_dssp SCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS-
T ss_pred CceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC-
Confidence 11 12111 1233 24445555566667777765 33320000 00000001111112111
Q ss_pred eEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECC--Ccee--eeEeecC---C------------cceE-EEEEe-----
Q psy10942 410 IITGGVWFVNFSPLDRILISSS-GDATIKLWCLT--DYVC--LKSLEGH---D------------ASVL-RCHFI----- 463 (537)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~--~~~~--~~~~~~~---~------------~~v~-~~~~s----- 463 (537)
....++|+|+|++|..+. ....|+.++.. .+.. ...+.+. . .... .++..
T Consensus 311 ----~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~ 386 (496)
T 3kya_A 311 ----WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYT 386 (496)
T ss_dssp ----CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred ----CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccc
Confidence 457899999999655554 56788886543 3322 1222221 0 1234 34444
Q ss_pred --cCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942 464 --NKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 494 (537)
Q Consensus 464 --~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 494 (537)
+++.++++=...++|+.++ .+|. +.++.+
T Consensus 387 ~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG 417 (496)
T 3kya_A 387 GEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAG 417 (496)
T ss_dssp SSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEE
T ss_pred ccCCCeEEEEECCCCEEEEEe-CCCC-EEEEec
Confidence 4566666666778899998 4664 445543
No 296
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.30 E-value=0.089 Score=47.48 Aligned_cols=102 Identities=7% Similarity=-0.164 Sum_probs=64.0
Q ss_pred eeeEEEEcCCCCEEE-EEeCCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCC--CcEEEEECCCCeeEE
Q psy10942 414 GVWFVNFSPLDRILI-SSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD--GLLKLWSIKTSTCVS 490 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~v~vwd~~~~~~~~ 490 (537)
....+++++.+..|. +-..++.|.++++........+.........++++|.+..|+.+... +.|...+++ |....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeE
Confidence 456788887555454 44567899999987543333333334567899999976666655543 678888874 44333
Q ss_pred Eec-CCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 491 TFD-KHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 491 ~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
.+. ..-... ..+ +++|+++.|+.+..
T Consensus 157 ~~~~~~~~~P-----------~gl---a~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 157 SLVTENIQWP-----------NGI---TLDLLSGRLYWVDS 183 (316)
T ss_dssp EEECSSCSCE-----------EEE---EEETTTTEEEEEET
T ss_pred EEEECCCCCc-----------eEE---EEeccCCEEEEEEC
Confidence 332 111222 667 99998888776654
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.29 E-value=0.016 Score=51.62 Aligned_cols=158 Identities=14% Similarity=0.051 Sum_probs=96.4
Q ss_pred eEEEEecCC-CCEEEEEcCCCcEEEEECCCCeeeee-eccCC--cceEEEEEecCCCceEEeeeeEEEE---cCCCCEEE
Q psy10942 356 LNVLRGHKK-GTQIVSTGADGLLKLWSIKTSTCVST-FDKHA--LKIWTLAITKDENQIITGGVWFVNF---SPLDRILI 428 (537)
Q Consensus 356 ~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~--~~i~~~~~~~~~~~~~~~~i~~~~~---s~~~~~l~ 428 (537)
......+.. +.++++.-..++|..||...+..... +..-. . ++.. .+..+.+ .|++++++
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g---------~~~~----~~sGl~~~~~D~~grL~v 81 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNG---------DGEQ----QMSGLSLLTHDNSKRLFA 81 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSS---------CCSE----EEEEEEESSSSSCCEEEE
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccC---------CCcc----eeeEEEEeccCCCCcEEE
Confidence 334455554 44445555789999999875533222 22100 0 0000 3467888 68877777
Q ss_pred EEe-------------CCCcEEEEECC---CceeeeEee--cC-----------CcceEEEEEecCCCEEEEEeCC-CcE
Q psy10942 429 SSS-------------GDATIKLWCLT---DYVCLKSLE--GH-----------DASVLRCHFINKGTQIVSTGAD-GLL 478 (537)
Q Consensus 429 ~~~-------------~dg~i~i~d~~---~~~~~~~~~--~~-----------~~~v~~~~~s~~~~~l~s~~~d-g~v 478 (537)
+.. .+..|..||+. +++.+.... .. ......++..++|+..++++.- +.|
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 544 26779999999 777765544 11 1247899999999999998888 887
Q ss_pred EEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942 479 KLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV 535 (537)
Q Consensus 479 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~ 535 (537)
...+.. |+.+..+....... ......+.+ +++|||+.|++...+|.|.
T Consensus 162 ~rV~pd-G~~~~~~~~~~~~~-----~~~~G~nGI---v~~pdg~~Liv~~~~g~L~ 209 (334)
T 2p9w_A 162 ARVSAD-GKTVSTFAWESGNG-----GQRPGYSGI---TFDPHSNKLIAFGGPRALT 209 (334)
T ss_dssp EEECTT-SCCEEEEEECCCCS-----SSCCSCSEE---EEETTTTEEEEESSSSSEE
T ss_pred EEEeCC-CCEEeeeeecCCCc-----ccccCcceE---EEeCCCCEEEEEcCCCeEE
Confidence 777764 44333332111110 001112566 9999999999887677764
No 298
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.16 E-value=0.13 Score=46.40 Aligned_cols=183 Identities=9% Similarity=-0.080 Sum_probs=97.5
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEE------
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVL------ 359 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~------ 359 (537)
++.+-...+.|..++..+....... ..........+++.+.+..| ++-...+.|.++++.... ....+
T Consensus 49 lyw~D~~~~~I~r~~~~g~~~~~~~----~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~ 123 (318)
T 3sov_A 49 IYWSDVSEEAIKRTEFNKTESVQNV----VVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQ 123 (318)
T ss_dssp EEEEETTTTEEEEEETTSSSCCCEE----EEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSS
T ss_pred EEEEECCCCcEEEEEccCCCceEEE----EcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCC
Confidence 4445555678888887765321111 11112345688998755444 444556789999987322 11111
Q ss_pred ----EecCCCCEEEEEc--CCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C
Q psy10942 360 ----RGHKKGTQIVSTG--ADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G 432 (537)
Q Consensus 360 ----~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~ 432 (537)
..++.+..++.+. ..+.|...++............- .....++++|++..|..+. .
T Consensus 124 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l-----------------~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 124 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI-----------------YWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-----------------SCEEEEEEETTTTEEEEEETT
T ss_pred ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC-----------------CCccEEEEeccCCEEEEEECC
Confidence 1122222222222 13444444443211111110000 1457899999777666665 4
Q ss_pred CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942 433 DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 492 (537)
.+.|..+|+........+.+.......+++..+ .++.+-...+.|..++..+|+....+
T Consensus 187 ~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 187 LNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEEECCCCCceEEE
Confidence 578999998643322222323445677777643 45555556788999998777655544
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.14 E-value=0.0048 Score=62.63 Aligned_cols=170 Identities=6% Similarity=-0.067 Sum_probs=90.4
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCC---ceeeEE----------E
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS-LDKTVKVWSTTGG---LKLLNV----------L 359 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~---~~~~~~----------~ 359 (537)
.+.|+..++.+..... .. .....+..++|++.+..|+.+. ..+.|+.+++... ...... +
T Consensus 385 ~~~I~~id~~~~~~~~-----~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gl 458 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTS-----LI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 458 (699)
T ss_dssp TTC-CEECTTSCCEEC-----CS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCE
T ss_pred ccceEEEeCCCCccee-----ee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceE
Confidence 3567777877654321 11 1223456889998777666654 4578999988730 111111 1
Q ss_pred Eec-CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC--CCcE
Q psy10942 360 RGH-KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG--DATI 436 (537)
Q Consensus 360 ~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i 436 (537)
... ..+.++++-...+.|.++++........+..... ....++++|.+.+|+.... .+.|
T Consensus 459 avD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~-----------------~P~giavDp~~g~ly~td~~~~~~I 521 (699)
T 1n7d_A 459 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKI 521 (699)
T ss_dssp ECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC-----------------CCCCEECCSSSSCCEECCCSSSCCE
T ss_pred EEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCC-----------------CcceEEEccCCCcEEEcccCCCCeE
Confidence 111 1233334444456666666654432222211111 3456778876555554432 2678
Q ss_pred EEEECCCceeeeEeecCCcceEEEEEecCCCEEE-EEeCCCcEEEEECCCC
Q psy10942 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIV-STGADGLLKLWSIKTS 486 (537)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~v~vwd~~~~ 486 (537)
..+++........+.......+.|+|+|++..|+ +-+..+.|.++++...
T Consensus 522 ~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 522 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp EBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred EEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 8777654222111222233467899999765555 4445678999998643
No 300
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.06 E-value=0.36 Score=49.67 Aligned_cols=394 Identities=10% Similarity=0.061 Sum_probs=185.7
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec-cccccceeeeEeecCccccccCCcEEEEEeCccceEEeee
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP-AYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYE 83 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd 83 (537)
|.++... .++ .|..+..+| +..+|..+.+...... ....+..+ ... ++. +..++.+ .|..+|
T Consensus 65 i~~i~~d--~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i---~~~--------~g~-lWigt~~-Gl~~~~ 127 (758)
T 3ott_A 65 IYCGVII--DNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTM---ALQ--------GDT-LWLGALN-GLYTYQ 127 (758)
T ss_dssp EEEEEEE--TTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEE---EEE--------TTE-EEEEETT-EEEEEE
T ss_pred EEEEEEc--CCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEE---Eec--------CCc-EEEEcCC-cceeEe
Confidence 5666555 454 455555667 7889988765432111 01112211 122 333 4444445 478888
Q ss_pred ccceehhhh-----cCCCcceEEEEEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEee--cc----hhhh
Q psy10942 84 TSAVKELYQ-----HGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV--GF----SDEI 152 (537)
Q Consensus 84 ~~~~~~~~~-----~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~----~~~v 152 (537)
..+++.... -.....|.++....+|.+.+ ++.+| |..++..+. ... .+. .. ...|
T Consensus 128 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~-----------~~~-~~~~~~~~~~~~~~i 193 (758)
T 3ott_A 128 LQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNG-----------KFE-GIPLPVHSSQSNLFV 193 (758)
T ss_dssp TTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTT-----------EEE-EECCCCCTTCSSCCE
T ss_pred CCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCC-----------ceE-EecCCCcccccccee
Confidence 766543211 11224688888888876554 55554 777887652 211 111 10 1125
Q ss_pred hhhhcccCCCccEEEeeeccccCCcccceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEE
Q psy10942 153 LDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLL 231 (537)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~ 231 (537)
.++... .+++.|.+++..+ + ..+|. .+.+.. +. .-. ...|.++
T Consensus 194 ~~i~~d-~~~~~lWigt~~G-----l-----------------~~~~~-------~~~~~~~~~----~l~--~~~i~~i 237 (758)
T 3ott_A 194 NSLLED-TTRQCVWIGTEGY-----L-----------------FQYFP-------STGQIKQTE----AFH--NNSIKSL 237 (758)
T ss_dssp EEEEEE-TTTTEEEEEEEEE-----E-----------------EEEET-------TTTEEEEEE----EEE--EEEEEEE
T ss_pred EEEEEE-CCCCEEEEEECCC-----C-----------------eEEcC-------CCCeEEecc----CCC--CCeEEEE
Confidence 555544 3445567777533 4 34444 333222 11 012 3458888
Q ss_pred eccCcccCCCeeeeccCCCcceeccccccCCCccccccccccccee------eeeeCCcceEEEEEeCCCeEEEEECCCC
Q psy10942 232 ERGKTVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHG------AFYTGGTVELLASGSLDKTVKVWSTTGG 305 (537)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~l~~~~~d~~i~i~~~~~~ 305 (537)
....+|.+.+. +.+| +. +++..................+ ....+.. ..+-.|+..| +.++.....
T Consensus 238 ---~~d~~g~lWig-T~~G-l~--~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~-g~lWiGT~~G-l~~~~~~~~ 308 (758)
T 3ott_A 238 ---ALDGNGDLLAG-TDNG-LY--VYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE-HNIWLGTDYG-ISLSRYNSA 308 (758)
T ss_dssp ---EECTTCCEEEE-ETTE-EE--EECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT-CCEEEEESSS-EEEECCCC-
T ss_pred ---EEcCCCCEEEE-eCCc-ee--EEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC-CCEEEEeCCc-ccccccCCc
Confidence 76777765554 3444 55 5665442211000000000000 0001100 2244444445 433332211
Q ss_pred ceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC------------------ceeeEEEEecCCCCE
Q psy10942 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG------------------LKLLNVLRGHKKGTQ 367 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~------------------~~~~~~~~~~~~~~~ 367 (537)
-................|.++.-.++|.+.+ |+.+| +..++.... ...+..+....++..
T Consensus 309 ~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l 386 (758)
T 3ott_A 309 LQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQL 386 (758)
T ss_dssp CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCE
T ss_pred eeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCE
Confidence 1100000000011234688888888887555 44555 555543311 011333444444544
Q ss_pred EEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc---
Q psy10942 368 IVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY--- 444 (537)
Q Consensus 368 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--- 444 (537)
.+ |+ ++-+..+|..+++......... ...+....|.++...+++++. .|+..+-+..+|..+.
T Consensus 387 Wi-gt-~~GL~~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 387 WI-AT-DGSINRYDYATRQFIHYNIVDN-----------TGTYNTNWTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EE-EE-TTEEEEEETTTTEEEEEEEECC-----------C--CBSSSEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHC
T ss_pred EE-Ee-CCcHhhcCcCCCcEEEeecCCC-----------cCCCCCceEEEEEEcCCCCEE-EEECCCceEEEcccccccc
Confidence 44 34 3468888887765332110000 000001156777777777644 4666667888885431
Q ss_pred --eee---eEee---c-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942 445 --VCL---KSLE---G-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490 (537)
Q Consensus 445 --~~~---~~~~---~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 490 (537)
... ..+. + ....|.++...++|.+.+.++..+-+..+|..+++...
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~ 507 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTK 507 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEE
T ss_pred CCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEE
Confidence 111 1111 1 12348889988888877644444568889988776543
No 301
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.05 E-value=0.063 Score=50.93 Aligned_cols=155 Identities=10% Similarity=-0.030 Sum_probs=81.6
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCC---CeeeeeeccCCc
Q psy10942 322 DINCVTVSPN--DKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKT---STCVSTFDKHAL 396 (537)
Q Consensus 322 ~v~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~ 396 (537)
....++++|+ +..|+.+...+.|+.+|+. ......... ......-++.+.+|.+.+-|... ...+..+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~-~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFV-NQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETT-TTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECC-CCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3568899984 4455555444889999986 333332221 11112223334444444444321 111111111110
Q ss_pred ceEEEEEecCCCceEEeeeeEEEEcC-CCCEEEEEeCCCcEEEEECCCceeeeEe-ec-CCcceEEEEEecCCCEEEEE-
Q psy10942 397 KIWTLAITKDENQIITGGVWFVNFSP-LDRILISSSGDATIKLWCLTDYVCLKSL-EG-HDASVLRCHFINKGTQIVST- 472 (537)
Q Consensus 397 ~i~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~s~- 472 (537)
......... ......++++| ++.+.++-..++.|+.+|..++.....+ .. ....-..++|+|++++|+.+
T Consensus 218 ~~~~~~~~~------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 218 FTERLSLCN------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp TCCEEEEEE------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred eeccccccc------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 000000000 01456688999 6666666556788999998876652222 21 11223469999999965555
Q ss_pred eCCCcEEEEECC
Q psy10942 473 GADGLLKLWSIK 484 (537)
Q Consensus 473 ~~dg~v~vwd~~ 484 (537)
...+.|+.+++.
T Consensus 292 ~~~~~I~~~~~d 303 (433)
T 4hw6_A 292 NGKHCIYRVDYN 303 (433)
T ss_dssp TTTTEEEEEEBC
T ss_pred CCCCEEEEEeCC
Confidence 456789998865
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.04 E-value=0.085 Score=48.09 Aligned_cols=100 Identities=4% Similarity=-0.107 Sum_probs=61.0
Q ss_pred eeeEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEe-CC
Q psy10942 414 GVWFVNFSPLDRILISSSG-----------------DATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTG-AD 475 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d 475 (537)
..+.+++.++|++.++... .|.|.-+|. ++.. .+...-...+.++|+||++.|+.+. ..
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~ 242 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLA 242 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCC
Confidence 5788888999987776541 244555554 3322 2222234468999999998887665 46
Q ss_pred CcEEEEECCC-CeeE--EEecCCccceeccCCCCCCccccccceeeec-CCCEEEEEeCC
Q psy10942 476 GLLKLWSIKT-STCV--STFDKHALKIRNSDSENDHKGFGLPRQLCSR-NSDCEYRGGWS 531 (537)
Q Consensus 476 g~v~vwd~~~-~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~-~~~~l~s~~~d 531 (537)
+.|..|++.. ++.. ..+. ..... -.+ ++.+ +|++.+++..+
T Consensus 243 ~~I~~~~~~~~g~l~~~~~~~-~~g~P-----------DGi---~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 243 HKIHVYEKHANWTLTPLRVLS-FDTLV-----------DNI---SVDPVTGDLWVGCHPN 287 (355)
T ss_dssp TEEEEEEECTTSCEEEEEEEE-CSSEE-----------EEE---EECTTTCCEEEEEESC
T ss_pred CeEEEEEECCCCcEecCEEEe-CCCCC-----------ceE---EEeCCCCcEEEEecCC
Confidence 7899999863 3322 1221 11222 556 8888 58877766533
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.99 E-value=0.047 Score=50.28 Aligned_cols=115 Identities=14% Similarity=0.055 Sum_probs=72.9
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCce------------eeeEeec------CCcceEEEEEec---CCCEEEEE
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYV------------CLKSLEG------HDASVLRCHFIN---KGTQIVST 472 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~------~~~~v~~~~~s~---~~~~l~s~ 472 (537)
.+..+..+|+|++||..+. ..|.|..+..+. ..+.+.- ...+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4566888999999988754 688898887321 1112221 246799999999 46689999
Q ss_pred eCCCcEEEEECCCC--eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe--CCCCEE
Q psy10942 473 GADGLLKLWSIKTS--TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG--WSPQVV 535 (537)
Q Consensus 473 ~~dg~v~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~--~dg~i~ 535 (537)
..|+.||+||+... ++. .+....... ..+ .......++ +|.+++-.|+..+ ..|.|.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~f-g~d-~~~~ev~S~---~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSF-GLD-ARVNDITDL---EFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEE-ESC-SSCCCEEEE---EECTTSSCEEEEECTTSCEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhcccccc-CCC-cccceEEEE---EEcCCCcEEEEEecCCCCCEE
Confidence 99999999999752 222 332111100 000 000111566 9999988887755 667664
No 304
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.79 E-value=0.35 Score=45.25 Aligned_cols=187 Identities=11% Similarity=-0.068 Sum_probs=96.2
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCceeeEEEE-----
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL-ASGSLDKTVKVWSTTGGLKLLNVLR----- 360 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~----- 360 (537)
++.+-...+.|+.+++......... .............+++.+.++.| ++-...+.|.+.++. +......+.
T Consensus 126 lywsD~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g~~~~~l~~~~~~~ 203 (400)
T 3p5b_L 126 IYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFRENGSK 203 (400)
T ss_dssp EEEEETTTTEEEEEEC------CCC-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-TCSEEEEEECSSCC
T ss_pred eEEEecCCCeEEEEEcccCCCCCcc-eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC-CCceEEEEeCCCCC
Confidence 4444455677777777652100000 11112233457889999854444 444556788888887 332222222
Q ss_pred -----ecCCCCEEEEEc-C-CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-C
Q psy10942 361 -----GHKKGTQIVSTG-A-DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-G 432 (537)
Q Consensus 361 -----~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~ 432 (537)
.++.+..|+... . .+.|...++............- .....|++++++..|..+. .
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l-----------------~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI-----------------QWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC-----------------SCEEEEEEETTTTEEEEEETT
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC-----------------CceEEEEEEeCCCEEEEEECC
Confidence 222222222221 1 2344444443221111111100 1567899998877777765 4
Q ss_pred CCcEEEEECCCceeeeEeec--CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942 433 DATIKLWCLTDYVCLKSLEG--HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493 (537)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 493 (537)
.+.|..+|+........... .......+++. .+.++++-...+.|..++..+|+.+..+.
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 267 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 57899999865433322332 22345677774 33455566667889999977776655554
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.78 E-value=0.3 Score=44.48 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=46.4
Q ss_pred eeeEEEEcCCCCEEEEEe-CCCcEEEEECCC-cee--eeEeecCCcceEEEEEec-CCCEEEEEeCC-CcEEEEEC
Q psy10942 414 GVWFVNFSPLDRILISSS-GDATIKLWCLTD-YVC--LKSLEGHDASVLRCHFIN-KGTQIVSTGAD-GLLKLWSI 483 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d-g~v~vwd~ 483 (537)
..+.++||||++.|..+. ..+.|..|++.. ++. ...+. ..+..-.+++.+ +|++.+++..+ +.|..|+.
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 467899999998887775 467899999863 322 22332 345577899999 59888877544 33444443
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.74 E-value=0.18 Score=45.03 Aligned_cols=171 Identities=12% Similarity=0.095 Sum_probs=82.9
Q ss_pred CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCce-eeEEEEecC-----
Q psy10942 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLK-LLNVLRGHK----- 363 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~-~~~~~~~~~----- 363 (537)
..+.+||..+.+-... ..+......-..+. .++++++.|+.+ ..+.+||+..... ....+..-+
T Consensus 31 ~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~ 105 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFL---PSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL 105 (301)
T ss_dssp CCEEEEETTTTEEEEC---CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS
T ss_pred eEEEEEcCCCCeEEeC---CCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc
Confidence 4688999887753221 11111111122222 256777777754 4688999873320 011111111
Q ss_pred ------CCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeC
Q psy10942 364 ------KGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSG 432 (537)
Q Consensus 364 ------~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (537)
++..++.|+.+ ..+.+||..+.+-... .-.|.... .-..+. .++++++.|+.
T Consensus 106 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-----------~~~p~~r~----~~~~~~--~~~~iyv~GG~ 168 (301)
T 2vpj_A 106 AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSML-----------GDMQTARE----GAGLVV--ASGVIYCLGGY 168 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE-----------EECSSCCB----SCEEEE--ETTEEEEECCB
T ss_pred eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEEC-----------CCCCCCcc----cceEEE--ECCEEEEECCC
Confidence 24445555433 3466677665543221 11121111 111111 25667777765
Q ss_pred C-----CcEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeE
Q psy10942 433 D-----ATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTSTCV 489 (537)
Q Consensus 433 d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~~~ 489 (537)
+ ..+.+||..+.+-... +......-. ++ .-++++++.|+.+ ..+.+||+.+.+-.
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAG-VA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCE-EE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccce-EE-EECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 4 4688999877543222 211111112 22 2256677777654 46899999876543
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.71 E-value=0.035 Score=56.33 Aligned_cols=80 Identities=11% Similarity=-0.120 Sum_probs=50.6
Q ss_pred eeeEEEEcCCCCEEEEE-eCCCcEEEEECCCceeeeEee--cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy10942 414 GVWFVNFSPLDRILISS-SGDATIKLWCLTDYVCLKSLE--GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 490 (537)
....|+++|++..|+.+ ...+.|..+++........+. ........|++..+ .++++....+.|..++..+|+.+.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 45678999886555554 456789999986533222222 11223455666554 455555667899999988888877
Q ss_pred EecC
Q psy10942 491 TFDK 494 (537)
Q Consensus 491 ~~~~ 494 (537)
.+..
T Consensus 620 ~i~~ 623 (699)
T 1n7d_A 620 LLAE 623 (699)
T ss_dssp CCCT
T ss_pred Eeec
Confidence 7643
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.66 E-value=0.26 Score=44.08 Aligned_cols=175 Identities=11% Similarity=0.092 Sum_probs=86.7
Q ss_pred EEEEEeC--CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEccCCceeeEEEE
Q psy10942 287 LLASGSL--DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD----KTVKVWSTTGGLKLLNVLR 360 (537)
Q Consensus 287 ~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~ 360 (537)
+++.|+. ...+.+||..+.+-... ..+......-..+.+ ++++++.|+.+ ..+.+||+. ...-.. +.
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~~-~~ 86 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDI---RCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVV-KDSWYS-KL 86 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEEC---CCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETT-TTEEEE-EE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecC---CCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCC-CCeEEE-CC
Confidence 4555554 36788999988754221 111111112222222 66777777754 568888887 332221 11
Q ss_pred ecC-----------CCCEEEEEcCC------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCC
Q psy10942 361 GHK-----------KGTQIVSTGAD------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPL 423 (537)
Q Consensus 361 ~~~-----------~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (537)
..+ ++..++.|+.+ ..+.+||..+.+-...-. .|.... .-..+. -+
T Consensus 87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r~----~~~~~~--~~ 149 (306)
T 3ii7_A 87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS-----------MLTQRC----SHGMVE--AN 149 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC-----------CSSCCB----SCEEEE--ET
T ss_pred CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC-----------CcCCcc----eeEEEE--EC
Confidence 111 24455555544 457777877664322211 111110 111111 25
Q ss_pred CCEEEEEeC---------CCcEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942 424 DRILISSSG---------DATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST 487 (537)
Q Consensus 424 ~~~l~~~~~---------dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 487 (537)
+++++.|+. -..+.+||..+.+-... +...... .+++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-HGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-ceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 566666653 34588999887543222 2111111 122222 56677776653 458899987764
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.54 E-value=0.39 Score=43.14 Aligned_cols=175 Identities=8% Similarity=0.064 Sum_probs=86.4
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeC-----C------CcEEEEEccCCcee
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSL-----D------KTVKVWSTTGGLKL 355 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d------~~i~i~d~~~~~~~ 355 (537)
+++.|+ ..+..||..+.+-.. ..+..............++++++.|+. . ..+..||+. ..+-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~----~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC----ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE----EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTEE
T ss_pred EEEEcC--CceEEECCCCCeEec----CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCeE
Confidence 344555 679999999887432 111111112223333457788888873 1 126777876 3221
Q ss_pred eEEEEecC-----------CCCEEEEEcCC--------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942 356 LNVLRGHK-----------KGTQIVSTGAD--------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW 416 (537)
Q Consensus 356 ~~~~~~~~-----------~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 416 (537)
..+..-+ ++..++.|+.+ ..+.+||..+.+-...-. .|..+ .-.
T Consensus 80 -~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r-----~~~ 142 (315)
T 4asc_A 80 -LGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-----------LPYVV-----YGH 142 (315)
T ss_dssp -EECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-----------CSSCC-----BSC
T ss_pred -EECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-----------CCCcc-----cce
Confidence 1111111 24455555532 457778877664322111 11111 011
Q ss_pred EEEEcCCCCEEEEEeC-C-----CcEEEEECCCceee--eEeecCCcceEEEEEecCCCEEEEEeCCC-----cEEEEEC
Q psy10942 417 FVNFSPLDRILISSSG-D-----ATIKLWCLTDYVCL--KSLEGHDASVLRCHFINKGTQIVSTGADG-----LLKLWSI 483 (537)
Q Consensus 417 ~~~~s~~~~~l~~~~~-d-----g~i~i~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~vwd~ 483 (537)
+++ ..++++++.|+. + ..+.+||..+.+-. ..+......- +++ .-++++++.|+.++ .+.+||+
T Consensus 143 ~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 143 TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLF-GAT-VHDGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp EEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEEEEECSSSEEEEEEEEET
T ss_pred eEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhce-EEE-EECCEEEEEeccCCCCccceEEEEEC
Confidence 111 134566677765 2 46899998875432 2221111111 122 22667777777654 4888998
Q ss_pred CCCee
Q psy10942 484 KTSTC 488 (537)
Q Consensus 484 ~~~~~ 488 (537)
.+.+-
T Consensus 220 ~~~~W 224 (315)
T 4asc_A 220 TDNKW 224 (315)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 77643
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.48 E-value=0.44 Score=42.48 Aligned_cols=176 Identities=11% Similarity=0.119 Sum_probs=84.6
Q ss_pred EEEEEeCC----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCceeeE
Q psy10942 287 LLASGSLD----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLKLLN 357 (537)
Q Consensus 287 ~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~ 357 (537)
+++.|+.+ ..+..||..+..-... ..+......-..+.+ ++++++.|+.+ ..+.+||+. ..+-.
T Consensus 18 i~v~GG~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~- 90 (302)
T 2xn4_A 18 MVVVGGQAPKAIRSVECYDFKEERWHQV---AELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPV-KDQWT- 90 (302)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETT-TTEEE-
T ss_pred EEEECCCCCCCCCcEEEEcCcCCcEeEc---ccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCC-CCcee-
Confidence 45555533 4688899887653221 111111111122222 66777777654 357888877 32221
Q ss_pred EEEecC-----------CCCEEEEEcCCC-----cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEc
Q psy10942 358 VLRGHK-----------KGTQIVSTGADG-----LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421 (537)
Q Consensus 358 ~~~~~~-----------~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s 421 (537)
.+..-+ ++..++.|+.++ .+.+||+.+.+-...-. .|.... . .+++.
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r~----~-~~~~~- 153 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP-----------MNTRRS----S-VGVGV- 153 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC-----------CSSCCB----S-CEEEE-
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC-----------CCCccc----C-ceEEE-
Confidence 111111 245555565442 46667776654322211 111110 1 11111
Q ss_pred CCCCEEEEEeCC-------CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942 422 PLDRILISSSGD-------ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST 487 (537)
Q Consensus 422 ~~~~~l~~~~~d-------g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 487 (537)
-++++++.|+.+ ..+.+||..+.+-.. .+....... +++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 154 VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 245666666532 458899988754322 222111111 2222 256777777654 368899988765
Q ss_pred e
Q psy10942 488 C 488 (537)
Q Consensus 488 ~ 488 (537)
-
T Consensus 232 W 232 (302)
T 2xn4_A 232 W 232 (302)
T ss_dssp E
T ss_pred E
Confidence 3
No 311
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.39 E-value=1.1 Score=46.03 Aligned_cols=197 Identities=13% Similarity=-0.001 Sum_probs=94.7
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCceeeEEEEec-CC
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG-SLDKTVKVWSTTGGLKLLNVLRGH-KK 364 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~-~~ 364 (537)
++++-...+.|+.+++......... ...+.........|++.+.++.|+.+ ...+.|.+.++. +......+... ..
T Consensus 438 lY~sD~~~~~I~~~~l~g~~~~~~~-~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l~~~~l~~ 515 (791)
T 3m0c_C 438 IYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFRENGSK 515 (791)
T ss_dssp EEEEETTTTEEEEEEC--------C-EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEEECTTCC
T ss_pred eEEeeccceeEEEEeccCCCCCcce-eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEEEeCCCCC
Confidence 4444455567777776643110000 11112223456789999877555554 456789999987 33222222211 11
Q ss_pred CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q psy10942 365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS-GDATIKLWCLTD 443 (537)
Q Consensus 365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~ 443 (537)
..-|+.-...|.|++-|......+..+.........+ +... ......|++++.+..|+.+. ..+.|..+++..
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l-v~~~-----l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL-VTEN-----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE-ECSS-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE-EeCC-----CCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 1223332333444444432211222221111111111 0000 01567889998777776665 456899999865
Q ss_pred ceeeeEeecC--CcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q psy10942 444 YVCLKSLEGH--DASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTF 492 (537)
Q Consensus 444 ~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 492 (537)
......+... ......|++..+ .++++-...+.|...+..+|+.+..+
T Consensus 590 ~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 590 GNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp CSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 4433333321 223456666433 34444445678888887777655555
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.39 E-value=0.15 Score=48.61 Aligned_cols=70 Identities=6% Similarity=-0.025 Sum_probs=43.2
Q ss_pred eeeEEEE-------cCCCCEEEEEeCCC-------cEEEEECCC-ceee-----eEeecCCcceEEEEEecC-CCEEEEE
Q psy10942 414 GVWFVNF-------SPLDRILISSSGDA-------TIKLWCLTD-YVCL-----KSLEGHDASVLRCHFINK-GTQIVST 472 (537)
Q Consensus 414 ~i~~~~~-------s~~~~~l~~~~~dg-------~i~i~d~~~-~~~~-----~~~~~~~~~v~~~~~s~~-~~~l~s~ 472 (537)
....++| ++++++|+++...+ .|.+++... +... ..+... .....++++|+ +.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEE
Confidence 5677888 99998666666543 266665333 2221 122221 23457788995 4555556
Q ss_pred eCCCcEEEEECC
Q psy10942 473 GADGLLKLWSIK 484 (537)
Q Consensus 473 ~~dg~v~vwd~~ 484 (537)
..++.|..+|+.
T Consensus 266 ~~~g~V~r~d~~ 277 (496)
T 3kya_A 266 YEKGQVFRLDLV 277 (496)
T ss_dssp TTTTEEEEECHH
T ss_pred CCCCEEEEEecc
Confidence 677889999987
No 313
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.30 E-value=0.6 Score=42.21 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=62.1
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEeec----CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG----HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV 489 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 489 (537)
.+..+.++++++.++. +.+|.+++.+...++.-..+.. +...+.++.+.+++.+++++ .++.+ .+..+.|+.-
T Consensus 206 ~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW 282 (327)
T 2xbg_A 206 RLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTW 282 (327)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSC
T ss_pred ccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCccc
Confidence 5677888888876654 4567777764332333222221 22358889999887766665 46766 4555556544
Q ss_pred EEecC---CccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942 490 STFDK---HALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV 535 (537)
Q Consensus 490 ~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~ 535 (537)
..+.. ....+ ..+ .|.+++. ++.++.+|.|.
T Consensus 283 ~~~~~~~~~~~~~-----------~~v---~~~~~~~-~~~~G~~G~i~ 316 (327)
T 2xbg_A 283 QQDVDVKKVPSNF-----------YKI---LFFSPDQ-GFILGQKGILL 316 (327)
T ss_dssp EECGGGTTSSSCC-----------CEE---EEEETTE-EEEECSTTEEE
T ss_pred EEcCccCCCCCCe-----------EEE---EEECCCc-eEEEcCCceEE
Confidence 44432 12334 666 8876555 55667788764
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.10 E-value=0.15 Score=54.52 Aligned_cols=225 Identities=11% Similarity=0.092 Sum_probs=122.5
Q ss_pred cCcceEEEEEcCccceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhhhcCCCcceEEE
Q psy10942 23 GRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELYQHGLSSPLVRI 102 (537)
Q Consensus 23 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~~~~v~~~ 102 (537)
+....|.|-|+.++..+.+- ++.+=+.+..| ..+.++.=. ...|.++|+++...+.....++.|.--
T Consensus 45 ~~~~~vvIidl~~~~~~~rr----pi~AdsAIMnP--------~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfW 111 (1630)
T 1xi4_A 45 GEQAQVVIIDMNDPSNPIRR----PISADSAIMNP--------ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW 111 (1630)
T ss_pred CCCceEEEEECCCCCCcccc----cccchhhccCC--------CcceEEEec-CCeEEEeehHHhhhhcccccCCCceEE
Confidence 33447888888887765333 33333335566 445555543 678999999999999999988888888
Q ss_pred EEeccccEEEEEeCCceEEEEecccccCcccccccccceeEEeecc----hhhhhhhhcccCCCccEEEeeeccccCCcc
Q psy10942 103 VRSSVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVGF----SDEILDIALLGEEDSHIVVASNEYLNGGDL 178 (537)
Q Consensus 103 ~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~~~~~~~~i 178 (537)
.|-.+. .|+..+. ..|.-|++.+. ..+.+.+..| ...|..-.-+ ++.+.+++.+-... .+.+
T Consensus 112 kWis~~-~l~lVT~-~aVyHW~~~~~----------s~P~k~fdR~~~L~~~QIinY~~d-~~~kW~~l~gi~~~-~~~v 177 (1630)
T 1xi4_A 112 KWISLN-TVALVTD-NAVYHWSMEGE----------SQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLLTGISAQ-QNRV 177 (1630)
T ss_pred EecCCC-eeEEEcC-CeEEEeccCCC----------CccHHHHhcchhcccCeeEEeeeC-CCCCeEEEEeeccC-CCcc
Confidence 885444 3444443 56999999752 2333333333 2335555555 45555544332211 1223
Q ss_pred cceeecccCCCcchhhHHHHHHHHHhhhccccccc-ccccccccCCCcCeEEEEeccCcc--cC-CCeeeeccC---CCc
Q psy10942 179 SGLVKLGANRSHNEWFDKTFERILEAKFKQSSSQQ-KHNTERLGRDELKTVTLLERGKTV--KE-EDLFPRQSM---EPS 251 (537)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-l~~~~~~~h~~~~~v~~~~~~~~s--~~-~~~l~~~~~---d~~ 251 (537)
.|.+ .+++. +....+ +. || ......+ ... +. ...++.+.. .+.
T Consensus 178 ~G~m-------------QLyS~-------er~~sQ~ie-----gh--a~~F~~~---~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 178 VGAM-------------QLYSV-------DRKVSQPIE-----GH--AASFAQF---KMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred ccee-------------eeeec-------ccccchhhh-----Hh--Hhhhhee---ccCCCCCCceEEEEEEecCCCce
Confidence 3333 77777 555555 66 77 4444333 221 11 223322221 256
Q ss_pred ceeccccccCC--Ccccccccccccceeeeee----CCcc--------eEEEEEeCCCeEEEEECCCCceee
Q psy10942 252 TLEELEKRKTY--HFPLFGIFVPEAEHGAFYT----GGTV--------ELLASGSLDKTVKVWSTTGGLKLL 309 (537)
Q Consensus 252 i~~~iw~~~~~--~~~~~~~~~~~~~~~~~~~----~~~v--------~~l~~~~~d~~i~i~~~~~~~~~~ 309 (537)
+. +-++... ..+... .....+...+ +..+ ..+..-+.-|.|.+||+.++..+.
T Consensus 228 Lh--i~Ei~~~~~~~~~f~---kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 228 LH--IIEVGTPPTGNQPFP---KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EE--EEecCCCccCCCCCc---cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 77 7776542 111110 0000111111 0111 566677788999999999997643
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.94 E-value=0.13 Score=47.38 Aligned_cols=141 Identities=7% Similarity=0.048 Sum_probs=81.1
Q ss_pred CcceEEEecCcceEEEEEcCccceeeeecc-----ccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceeh
Q psy10942 15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPA-----YESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKE 89 (537)
Q Consensus 15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~ 89 (537)
++..++.+- ++.||.-++......+.+.. +..+..+ +.+| ++.+++..+.. .|.|-.+..+..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~ql--vlSp--------sG~lLAl~g~~-~V~Vv~LP~~~~ 98 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHV--ISST--------SGDLLCLFNDN-EIFVMEVPWGYS 98 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEE--EECT--------TSSEEEEECSS-EEEEEECCTTCS
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEE--EECC--------CCCEEEEecCC-eEEEEEecCccc
Confidence 333344332 35677777764444444332 2245555 6677 77888888844 588887763221
Q ss_pred -----------------hhhcC--CCcceEEEEEecc---ccEEEEEeCCceEEEEecccccCcccccccccceeEEeec
Q psy10942 90 -----------------LYQHG--LSSPLVRIVRSSV---KRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFVG 147 (537)
Q Consensus 90 -----------------~~~~~--~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 147 (537)
+...+ ...+|..+.|+|- +..|++-..|+.|++||+......+. ..+.......+..
T Consensus 99 ~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~ 177 (452)
T 3pbp_A 99 NVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDA 177 (452)
T ss_dssp CCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCS
T ss_pred cCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCc
Confidence 01111 1357999999884 45799999999999999986321111 0000000001112
Q ss_pred chhhhhhhhcccCCCccEEEee
Q psy10942 148 FSDEILDIALLGEEDSHIVVAS 169 (537)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~ 169 (537)
....|.+++|. .++=.|.+.+
T Consensus 178 ~~~ev~S~~Fg-~~~lTLYvl~ 198 (452)
T 3pbp_A 178 RVNDITDLEFS-KDGLTLYCLN 198 (452)
T ss_dssp SCCCEEEEEEC-TTSSCEEEEE
T ss_pred ccceEEEEEEc-CCCcEEEEEe
Confidence 22457889998 5666676655
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.87 E-value=0.97 Score=40.77 Aligned_cols=104 Identities=8% Similarity=0.050 Sum_probs=65.8
Q ss_pred eEEEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEE--cC-CCCEEEEE-eCCCcEEEEEccCCceeeEEEEe
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV--SP-NDKLLASG-SLDKTVKVWSTTGGLKLLNVLRG 361 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~-~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~ 361 (537)
..++.++.||.|.-+|..+++........ ...++....- .+ ++..++.. ..||.++.++... +.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~ 85 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPLSI 85 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEEEH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeeecc
Confidence 47899999999999999999887655221 1111111100 01 22333333 5788888888763 322221111
Q ss_pred ---------c-------------CCCCEEEEEcCCCcEEEEECCCCeeeeeeccC
Q psy10942 362 ---------H-------------KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 394 (537)
Q Consensus 362 ---------~-------------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 394 (537)
. ..+..+++++.+|++...|+.+|+.+..+...
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 0 14667889999999999999999999888643
No 317
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.84 E-value=0.92 Score=40.30 Aligned_cols=176 Identities=13% Similarity=0.121 Sum_probs=86.9
Q ss_pred eEEEEEeCC-----CeEEEEECCCCc---eeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCC
Q psy10942 286 ELLASGSLD-----KTVKVWSTTGGL---KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGG 352 (537)
Q Consensus 286 ~~l~~~~~d-----~~i~i~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~ 352 (537)
..++.|+.+ ..+.+||..+.. -.. ...+......-..+.+ ++++++.|+.+ ..+.+||+. .
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~---~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~-~ 137 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYS---VAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPN-I 137 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEE---ECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT-T
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEE---CCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCC-C
Confidence 455666544 468899988765 211 1111111112222222 57777777643 357888887 3
Q ss_pred ceeeEEEEecC-----------CCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeee
Q psy10942 353 LKLLNVLRGHK-----------KGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW 416 (537)
Q Consensus 353 ~~~~~~~~~~~-----------~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 416 (537)
.+-.. +...+ ++..++.|+.+ ..+..||+.+.+-...-. .|.... ...
T Consensus 138 ~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----------~p~~r~----~~~ 201 (301)
T 2vpj_A 138 DQWSM-LGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP-----------MATKRS----GAG 201 (301)
T ss_dssp TEEEE-EEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC-----------CSSCCB----SCE
T ss_pred CeEEE-CCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC-----------CCcccc----cce
Confidence 32222 11111 24455555543 356777776654332211 111111 111
Q ss_pred EEEEcCCCCEEEEEeCC-----CcEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECC
Q psy10942 417 FVNFSPLDRILISSSGD-----ATIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIK 484 (537)
Q Consensus 417 ~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~ 484 (537)
.+. -++++++.|+.+ ..+.+||+.+.+-... +.........+ .-++++++.|+.+ ..+.+||++
T Consensus 202 ~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 202 VAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred EEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcCcCCCcccccEEEEcCC
Confidence 112 256677777653 4689999987543322 22111111222 2266777777755 357888987
Q ss_pred CCe
Q psy10942 485 TST 487 (537)
Q Consensus 485 ~~~ 487 (537)
+.+
T Consensus 278 ~~~ 280 (301)
T 2vpj_A 278 IDS 280 (301)
T ss_dssp TTE
T ss_pred CCe
Confidence 754
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.72 E-value=0.32 Score=44.60 Aligned_cols=28 Identities=7% Similarity=-0.070 Sum_probs=20.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy10942 321 KDINCVTVSPNDKLLASGSLDKTVKVWST 349 (537)
Q Consensus 321 ~~v~~~~~s~~~~~l~~~~~d~~i~i~d~ 349 (537)
.....|+|.|+|+++ ++..+|.|++++.
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~ 56 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP 56 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC
Confidence 346789999999744 4556688888763
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.71 E-value=1.2 Score=40.69 Aligned_cols=61 Identities=7% Similarity=-0.000 Sum_probs=33.3
Q ss_pred EEEEeCCCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCC---CCEEEEEeCC------CcEEEEEcc
Q psy10942 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN---DKLLASGSLD------KTVKVWSTT 350 (537)
Q Consensus 288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d------~~i~i~d~~ 350 (537)
++.+..+|.|++++ .+......-.............|+++|+ +..|+++... +.|..++..
T Consensus 44 l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 44 MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 33444568888888 2321100000111222456889999998 5555554432 567777776
No 320
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.71 E-value=2.2 Score=43.76 Aligned_cols=180 Identities=9% Similarity=-0.002 Sum_probs=94.6
Q ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC-----c--------
Q psy10942 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGG-----L-------- 353 (537)
Q Consensus 288 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-----~-------- 353 (537)
+-.|+ ++-+..|+..+++...-....... .....|.++...++++ |..|+..+-+.++|.... .
T Consensus 386 lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 463 (758)
T 3ott_A 386 LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNY 463 (758)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEE
T ss_pred EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceeccccc
Confidence 44455 457888998776532111000000 1234688888877775 455666556888875410 1
Q ss_pred --------eeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCC
Q psy10942 354 --------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR 425 (537)
Q Consensus 354 --------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~ 425 (537)
..+..+....++...+.++..+-+..+|..+++.......... . ...+.++....+|.
T Consensus 464 ~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~--------~------~~~~~~i~~d~~g~ 529 (758)
T 3ott_A 464 SVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELT--------G------EKSPNYLLCDEDGL 529 (758)
T ss_dssp CGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSC--------G------GGCEEEEEECTTSC
T ss_pred ccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcC--------C------CcccceEEECCCCC
Confidence 1133444445566655333344577788776654332111000 0 01466777788887
Q ss_pred EEEEEeCCCcEEEEECCCceeeeE-eec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCee
Q psy10942 426 ILISSSGDATIKLWCLTDYVCLKS-LEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488 (537)
Q Consensus 426 ~l~~~~~dg~i~i~d~~~~~~~~~-~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~ 488 (537)
+.+. +. +-+..||..+.+.... ..+ ....|.++... +|. |..++..| +..+|..+.+.
T Consensus 530 lWig-t~-~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~ 589 (758)
T 3ott_A 530 LWVG-FH-GGVMRINPKDESQQSISFGSFSNNEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDA 589 (758)
T ss_dssp EEEE-ET-TEEEEECC--CCCCBCCCCC---CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCCE
T ss_pred EEEE-ec-CceEEEecCCCceEEecccCCCccceEEEEEC-CCC-EEEECCCC-eEEEcCCCcee
Confidence 7654 44 4588888765432211 111 12457777764 554 55555555 78888877653
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.69 E-value=1.1 Score=39.97 Aligned_cols=176 Identities=11% Similarity=0.110 Sum_probs=88.0
Q ss_pred eEEEEEeCC----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEccCCcee
Q psy10942 286 ELLASGSLD----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD------KTVKVWSTTGGLKL 355 (537)
Q Consensus 286 ~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~i~d~~~~~~~ 355 (537)
.+++.|+.+ ..+.+||..+.+-.... .+......-..+.+ ++++++.|+.+ ..+.+||+. ...-
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~-~~~W 130 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKL---GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTR-TESW 130 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEE---CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETT-TTEE
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECC---CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCC-CCce
Confidence 466666644 67889998887542211 11111111222222 67777777755 458888887 3322
Q ss_pred eEEEEecC-----------CCCEEEEEcC---------CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeee
Q psy10942 356 LNVLRGHK-----------KGTQIVSTGA---------DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGV 415 (537)
Q Consensus 356 ~~~~~~~~-----------~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 415 (537)
.. +...+ ++..++.|+. -..+.+||+.+.+-...-. .|.... .-
T Consensus 131 ~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-----------~p~~r~----~~ 194 (306)
T 3ii7_A 131 HT-KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-----------MIEARK----NH 194 (306)
T ss_dssp EE-ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-----------CSSCCB----SC
T ss_pred Ee-CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-----------ccchhh----cc
Confidence 11 11111 2344444443 3446777777664322211 111110 11
Q ss_pred eEEEEcCCCCEEEEEeCC-----CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEEC
Q psy10942 416 WFVNFSPLDRILISSSGD-----ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSI 483 (537)
Q Consensus 416 ~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~ 483 (537)
..+.+ ++++++.|+.+ ..+.+||..+.+- +..+.........+.+ ++++++.|+.+ ..+.+||+
T Consensus 195 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 195 GLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp EEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred eEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 11112 55666666543 4688999887542 2222211112222222 66777888754 46889998
Q ss_pred CCCe
Q psy10942 484 KTST 487 (537)
Q Consensus 484 ~~~~ 487 (537)
.+.+
T Consensus 271 ~~~~ 274 (306)
T 3ii7_A 271 ETDK 274 (306)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7764
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.68 E-value=0.96 Score=40.19 Aligned_cols=176 Identities=13% Similarity=0.173 Sum_probs=85.6
Q ss_pred eEEEEEeCC-----CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEccCCcee
Q psy10942 286 ELLASGSLD-----KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDK-----TVKVWSTTGGLKL 355 (537)
Q Consensus 286 ~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~~~ 355 (537)
..++.|+.+ ..+.+||..+.+-... ..+......-..+.+ ++++++.|+.++ .+.+||+. ...-
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W 136 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSV---ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIK-SNEW 136 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETT-TTEE
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeC---CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCC-CCeE
Confidence 455566543 3588899887653221 111111111222222 677777777553 46778876 3222
Q ss_pred eEEEEecC-----------CCCEEEEEcCC-------CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeE
Q psy10942 356 LNVLRGHK-----------KGTQIVSTGAD-------GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF 417 (537)
Q Consensus 356 ~~~~~~~~-----------~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 417 (537)
.. +...+ ++..++.|+.+ ..+.+||+.+.+-...- -.|.... ....
T Consensus 137 ~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~----~~~~ 200 (302)
T 2xn4_A 137 FH-VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-----------EMSTRRS----GAGV 200 (302)
T ss_dssp EE-ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-----------CCSSCCB----SCEE
T ss_pred ee-cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-----------CCccccc----cccE
Confidence 11 11111 23444444432 34667777665432221 1111110 1111
Q ss_pred EEEcCCCCEEEEEeCC-----CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCCC-----cEEEEECCC
Q psy10942 418 VNFSPLDRILISSSGD-----ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGADG-----LLKLWSIKT 485 (537)
Q Consensus 418 ~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~vwd~~~ 485 (537)
+. -++++++.|+.+ ..+.+||..+.+-.. .+......- .++ ..++++++.|+.++ .+.+||+.+
T Consensus 201 ~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 201 GV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-GVC-AVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC-eEE-EECCEEEEECCcCCCcccccEEEEcCCC
Confidence 11 256677777654 468899988754322 221111111 122 23667777777553 489999877
Q ss_pred Ce
Q psy10942 486 ST 487 (537)
Q Consensus 486 ~~ 487 (537)
.+
T Consensus 277 ~~ 278 (302)
T 2xn4_A 277 DK 278 (302)
T ss_dssp TE
T ss_pred Ce
Confidence 65
No 323
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.60 E-value=1.2 Score=39.94 Aligned_cols=64 Identities=9% Similarity=0.141 Sum_probs=35.0
Q ss_pred CCCCEEEEEeC------CCcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942 422 PLDRILISSSG------DATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST 487 (537)
Q Consensus 422 ~~~~~l~~~~~------dg~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 487 (537)
.++++++.|+. -..+.+||..+.+-.. .+...... .+++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 35666666653 2458999988754322 22111111 12222 256777777653 347788887764
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.56 E-value=1.1 Score=40.11 Aligned_cols=64 Identities=8% Similarity=0.045 Sum_probs=36.4
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCee
Q psy10942 423 LDRILISSSGD-----ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTSTC 488 (537)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~~ 488 (537)
++++++.|+.+ ..+.+||..+.+-.. .+......-. ++.. ++++++.|+.+ ..+.+||+.+.+-
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAG-VCVL-HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccce-EEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56667776654 468899987754322 2211111112 2222 66677777654 4689999887653
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.37 E-value=0.31 Score=44.67 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=60.2
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEee---cCCcceEEEEEecC---CCEEEEEeC-C-----CcEE
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLE---GHDASVLRCHFINK---GTQIVSTGA-D-----GLLK 479 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~---~~~~~v~~~~~s~~---~~~l~s~~~-d-----g~v~ 479 (537)
....++|.|+|+++++ ..+|.|++++ +++. +..+. ........++|+|+ +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 5678999999985554 5669999998 3332 22221 12346789999998 555554433 2 5688
Q ss_pred EEECCCCee------EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 480 LWSIKTSTC------VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 480 vwd~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
.++...+.. +..+..+.. ..+.+..+ +|.|||.+.++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~--------~~h~~~~l---~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPH--------GLHSGGRI---AFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTT--------CCCCCCCE---EECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCC--------CCcCCceE---EECCCCCEEEEEC
Confidence 888764421 111211000 11222567 9999997666644
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.33 E-value=0.49 Score=50.88 Aligned_cols=236 Identities=11% Similarity=0.093 Sum_probs=127.0
Q ss_pred cccCCCeeeeccCCCcceeccccccCCCcccccccccccceeeeeeCCcceEEEEEeCCCeEEEEECCCCceeeeeeccc
Q psy10942 236 TVKEEDLFPRQSMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315 (537)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 315 (537)
.+|..+.+|.-. ..++. ++++..........+..++.-+.+-+.. .++.. .+..|.-|++.+...+.+.+.+.
T Consensus 73 MnP~~~iiALra-g~~lQ--iFnl~~k~klks~~~~e~VvfWkWis~~---~l~lV-T~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQ--IFNIEMKSKMKAHTMTDDVTFWKWISLN---TVALV-TDNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred cCCCcceEEEec-CCeEE--EeehHHhhhhcccccCCCceEEEecCCC---eeEEE-cCCeEEEeccCCCCccHHHHhcc
Confidence 455555555433 56788 8998875433333333333333333332 22222 24689999997654433322222
Q ss_pred ccccCCCeEEEEEcCCCCEEEEEe-------CCCcEEEEEccCCceeeEEEEec------------CCCCEEEE-Ec---
Q psy10942 316 KKGHEKDINCVTVSPNDKLLASGS-------LDKTVKVWSTTGGLKLLNVLRGH------------KKGTQIVS-TG--- 372 (537)
Q Consensus 316 ~~~~~~~v~~~~~s~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~------------~~~~~l~~-~~--- 372 (537)
-.-....|..-..+++.++++..+ -.|.+.+|.... +.-+.+.+| +....+++ +.
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 111246677888889998877543 347788888762 222223332 22222332 22
Q ss_pred CCCcEEEEECCCC-eeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942 373 ADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE 451 (537)
Q Consensus 373 ~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 451 (537)
..+++++.++... ..-. ........+.+.|+... .-..++..|+....+...+.-|.|++||+.++.++..-+
T Consensus 224 ~g~kLhi~Ei~~~~~~~~---~f~kk~~~~~~~~~~~~---Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQ---PFPKKAVDVFFPPEAQN---DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CCceEEEEecCCCccCCC---CCccccccccCCccccc---CcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 1368888887543 1111 11112233444443111 134567788888888888899999999999998877665
Q ss_pred cCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 452 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
-...+|...+-+....-++.....|.|.--.+...
T Consensus 298 is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred ccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 44455544443333223333335555554444443
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.26 E-value=0.22 Score=45.20 Aligned_cols=107 Identities=14% Similarity=0.049 Sum_probs=62.9
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEe----ecCCcceEEEEEecC---CCEEEEE-e--CCCcEEEE
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSL----EGHDASVLRCHFINK---GTQIVST-G--ADGLLKLW 481 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~----~~~~~~v~~~~~s~~---~~~l~s~-~--~dg~v~vw 481 (537)
..+.|+|.|||+++++-...|.|++++...++. +..+ .........|+++|+ +..|+.. + .++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 567899999999777765589999998665543 2211 123456789999995 3444432 2 34556666
Q ss_pred ECCCCe--------eEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 482 SIKTST--------CVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 482 d~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
.+..+. ....+.. ......+....| .|.|||.+.++.++
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~-------~p~~~~H~g~~l---~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRG-------IPKGVIHNGGRI---AFGPDKMLYAGTGE 159 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEE-------ECCCSSCCCCCE---EECTTSCEEEECBC
T ss_pred EeCCCCcccccCCCcEEEEEc-------CCCCCCccCccc---cCCCCCCEEEEECC
Confidence 654421 1111110 000112233567 99999987777653
No 328
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.24 E-value=1.7 Score=39.27 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=61.1
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEEC--CCceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCL--TDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST 491 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 491 (537)
.+..+++.|++.+++.+...+..+-.|- .+.+.+. ......+..+.+.+++..++ ++.+|.+++.+.+.|+....
T Consensus 164 ~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~ 240 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGE 240 (327)
T ss_dssp CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECC
T ss_pred ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEe
Confidence 5677889998888877654333333442 3444442 23456788999999887654 55678777765333443333
Q ss_pred ecCC----ccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE
Q psy10942 492 FDKH----ALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV 534 (537)
Q Consensus 492 ~~~~----~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i 534 (537)
+... ...+ .++ ++.+++..++++ .+|.|
T Consensus 241 ~~~~~~~~~~~~-----------~~v---~~~~~~~~~~~g-~~g~i 272 (327)
T 2xbg_A 241 LLSPLRRNSVGF-----------LDL---AYRTPNEVWLAG-GAGAL 272 (327)
T ss_dssp CBCTTSSCCSCE-----------EEE---EESSSSCEEEEE-STTCE
T ss_pred ccCCcccCCcce-----------EEE---EecCCCEEEEEe-CCCeE
Confidence 2211 1123 566 888877766654 45655
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.00 E-value=1.8 Score=41.08 Aligned_cols=29 Identities=3% Similarity=0.093 Sum_probs=20.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy10942 322 DINCVTVSPNDKLLASGSLDKTVKVWSTT 350 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~ 350 (537)
....|+|.|+|+++++-...+.|++++..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 45799999999877765443467776654
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.00 E-value=2.1 Score=39.13 Aligned_cols=61 Identities=10% Similarity=0.084 Sum_probs=37.5
Q ss_pred cceEEEEEe-------cCCCEEEEEeCCCcEEEEECCCC-eeE--EEe-cCCccceeccCCCCCCccccccceeeecCCC
Q psy10942 455 ASVLRCHFI-------NKGTQIVSTGADGLLKLWSIKTS-TCV--STF-DKHALKIRNSDSENDHKGFGLPRQLCSRNSD 523 (537)
Q Consensus 455 ~~v~~~~~s-------~~~~~l~s~~~dg~v~vwd~~~~-~~~--~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 523 (537)
.....++|. .+|.++++.-..+.|...++... +.. ..+ .+....+ ..+ ++.|||.
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp-----------~~v---~~~pDG~ 324 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRL-----------RDV---VIDDDGG 324 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCE-----------EEE---EECTTSC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCe-----------eEE---EECCCCc
Confidence 346788883 46766666666677888887643 221 122 1112233 777 9999998
Q ss_pred EEEEEe
Q psy10942 524 CEYRGG 529 (537)
Q Consensus 524 ~l~s~~ 529 (537)
+.++..
T Consensus 325 lyv~~~ 330 (354)
T 3a9g_A 325 ILISTS 330 (354)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 776654
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.96 E-value=1.1 Score=41.13 Aligned_cols=61 Identities=10% Similarity=0.079 Sum_probs=29.6
Q ss_pred EEEEEe-CCCeEEEEECCCCceeeeeeccccc-ccCCCeEEEEEcCCCCEEEEEeC-C---------CcEEEEEcc
Q psy10942 287 LLASGS-LDKTVKVWSTTGGLKLLNVLRGHKK-GHEKDINCVTVSPNDKLLASGSL-D---------KTVKVWSTT 350 (537)
Q Consensus 287 ~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-d---------~~i~i~d~~ 350 (537)
+++.|+ ....+.+||..+....... ...+. .....-..+.+ ++++++.|+. + ..+.+||+.
T Consensus 22 iyv~GG~~~~~~~~~d~~~~~~~W~~-~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 22 VYIGLGSAGTAWYKLDTQAKDKKWTA-LAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp EEEECGGGTTCEEEEETTSSSCCEEE-CCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred EEEEeCcCCCeEEEEccccCCCCeeE-CCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 344444 3457888998742211111 11111 11111222223 5677777765 2 458888886
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.93 E-value=1.9 Score=38.37 Aligned_cols=167 Identities=9% Similarity=0.056 Sum_probs=81.4
Q ss_pred CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCceeeEEEEecC------
Q psy10942 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLD-----KTVKVWSTTGGLKLLNVLRGHK------ 363 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~------ 363 (537)
..+.+||..+.+-... ..+......-..+.+ ++++++.|+.+ ..+.+||+. ..+-.. +...+
T Consensus 90 ~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~-~~~~p~~r~~~ 162 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPC---APMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPE-RDEWHL-VAPMLTRRIGV 162 (308)
T ss_dssp CCEEEEETTTTEEEEC---CCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETT-TTEEEE-CCCCSSCCBSC
T ss_pred ceEEEECCCCCeEeEC---CCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCC-CCeEeE-CCCCCccccce
Confidence 4688899887653221 111111112222333 66777776643 357888876 222111 11101
Q ss_pred -----CCCEEEEEcCC-----CcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC
Q psy10942 364 -----KGTQIVSTGAD-----GLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD 433 (537)
Q Consensus 364 -----~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (537)
++..++.|+.+ ..+.+||+.+.+-...-. .|..+. ....+.+ ++++++.|+.+
T Consensus 163 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-----------~p~~r~----~~~~~~~--~~~iyv~GG~~ 225 (308)
T 1zgk_A 163 GVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-----------MNTIRS----GAGVCVL--HNCIYAAGGYD 225 (308)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-----------CSSCCB----SCEEEEE--TTEEEEECCBC
T ss_pred EEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-----------CCCccc----cceEEEE--CCEEEEEeCCC
Confidence 24455555543 457777776654322111 111110 1111222 56677777654
Q ss_pred -----CcEEEEECCCceeee--EeecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEECCCCe
Q psy10942 434 -----ATIKLWCLTDYVCLK--SLEGHDASVLRCHFINKGTQIVSTGAD-----GLLKLWSIKTST 487 (537)
Q Consensus 434 -----g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~v~vwd~~~~~ 487 (537)
..+.+||+.+.+-.. .+....... +++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCccceEEEEeCCCCcEEECCCCCCCccce-EEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 568999988754322 222111111 2222 256777777654 357888887764
No 333
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.67 E-value=0.11 Score=43.10 Aligned_cols=101 Identities=13% Similarity=-0.125 Sum_probs=60.3
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee------eeEeec-CCcceEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC------LKSLEG-HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~ 486 (537)
.+..++|+|+|.+.++ .+|.++-.+..+... -..+-. --..-..+.|.|+|.+.++ .||.|+-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5678999999987776 667776666544111 111110 0111478899999987777 5698888875432
Q ss_pred eeEEE------e-cCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCE
Q psy10942 487 TCVST------F-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQV 534 (537)
Q Consensus 487 ~~~~~------~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i 534 (537)
..-.- + ..--..+ ..| .|.|+|.+.+.. |+.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~-----------~~l---ff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGF-----------KFL---FFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGE-----------EEE---EECTTSCEEEEE--TTEE
T ss_pred CCCceeccccEeccCCCCce-----------EEE---EECCCceEEEEe--CCcE
Confidence 11100 0 0011233 556 999999888776 6654
No 334
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.58 E-value=1.1 Score=37.18 Aligned_cols=63 Identities=10% Similarity=-0.039 Sum_probs=41.3
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEECCCceee------eEe-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10942 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCL------KSL-EGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482 (537)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd 482 (537)
.++.|.|+|.+.++ .||.|+-++-.+.... ..+ +.--..+..+.|.|+|.+.+.. |+.++-+.
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 67889999988887 5698888875431110 111 1112467999999999877766 77754443
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.57 E-value=0.8 Score=40.75 Aligned_cols=68 Identities=7% Similarity=0.015 Sum_probs=41.5
Q ss_pred EEEcCCCCEEEEEe----CCCcEEEEECCCceeeeEeecCCcceEEEEEecCCCEEEEEeC-CCcEEEEECCCCeeEE
Q psy10942 418 VNFSPLDRILISSS----GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA-DGLLKLWSIKTSTCVS 490 (537)
Q Consensus 418 ~~~s~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~ 490 (537)
..|++++++|+-.. .+..|+..++.. .....+..+.. ..++++++.|+-.+. ...|.+-++..+....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 35677888888765 234566666654 33344443322 456778888876654 5678888876655433
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.03 E-value=2.8 Score=38.18 Aligned_cols=56 Identities=9% Similarity=-0.013 Sum_probs=29.7
Q ss_pred cEEEEECCCc--eeeeEeecCCcceEEEEEecCCCEEEEEeCCC------cEEEEECCCCeeEEEe
Q psy10942 435 TIKLWCLTDY--VCLKSLEGHDASVLRCHFINKGTQIVSTGADG------LLKLWSIKTSTCVSTF 492 (537)
Q Consensus 435 ~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg------~v~vwd~~~~~~~~~~ 492 (537)
.+.+||+.+. +.+..+...... ..+...++++++.|+.++ .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 5778998764 333333322222 122334677888888653 3566688777766543
No 337
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.66 E-value=3.7 Score=36.62 Aligned_cols=64 Identities=13% Similarity=0.099 Sum_probs=35.8
Q ss_pred CCCEEEEEeCCC-----cEEEEECCCceeeeE--eecCCcceEEEEEecCCCEEEEEeCC--------------CcEEEE
Q psy10942 423 LDRILISSSGDA-----TIKLWCLTDYVCLKS--LEGHDASVLRCHFINKGTQIVSTGAD--------------GLLKLW 481 (537)
Q Consensus 423 ~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~v~vw 481 (537)
++++++.|+.++ .+.+||..+.+-... +....... +++ .-++++++.|+.+ ..+.+|
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL-SLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce-eEE-EECCEEEEECCccccCcCCccccccccCcEEEe
Confidence 567777776544 588899877543222 21111111 222 2256777777753 237788
Q ss_pred ECCCCee
Q psy10942 482 SIKTSTC 488 (537)
Q Consensus 482 d~~~~~~ 488 (537)
|+.+.+-
T Consensus 274 d~~~~~W 280 (315)
T 4asc_A 274 NEEEKKW 280 (315)
T ss_dssp ETTTTEE
T ss_pred cCCCChh
Confidence 8877653
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.95 E-value=0.76 Score=43.72 Aligned_cols=107 Identities=15% Similarity=0.154 Sum_probs=60.3
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCcee--eeEeec------CCcceEEEEEecC---CCEEEEEeC--------
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVC--LKSLEG------HDASVLRCHFINK---GTQIVSTGA-------- 474 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~------~~~~v~~~~~s~~---~~~l~s~~~-------- 474 (537)
..+.|+|.|+|+++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 567899999999777654445788887655443 222221 2355779999995 555554432
Q ss_pred -----CCcEEEEECCCC--ee---EEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 475 -----DGLLKLWSIKTS--TC---VSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 475 -----dg~v~vwd~~~~--~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
...|.-++...+ .. ...+.. ......+.+..| +|.|||.+.++.++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~-------~p~~~~H~~~~l---~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAG-------LPSSKDHQSGRL---VIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEE-------ECCCSSCCEEEE---EECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEc-------CCCCCCCCCCeE---eECCCCeEEEEECC
Confidence 134555554322 11 111110 000112233667 99999998877654
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.72 E-value=0.39 Score=45.91 Aligned_cols=106 Identities=12% Similarity=0.052 Sum_probs=69.5
Q ss_pred eeeEEEEcCCCCEEEEEeC-CCcEEEEECCCcee-------------eeEeecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy10942 414 GVWFVNFSPLDRILISSSG-DATIKLWCLTDYVC-------------LKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 479 (537)
....+.++|||+++++++. +.++.++|+.+... ....+. .-.....+|.++|....|.--|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEE
Confidence 4566889999999888764 78899999875211 222232 23457789999995555666899999
Q ss_pred EEECCCC----------eeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEe
Q psy10942 480 LWSIKTS----------TCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGG 529 (537)
Q Consensus 480 vwd~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~ 529 (537)
.|++... ..+..+..|-.+-..... .+= .-.|||++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~------~ge---t~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHAS------LCE---TNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEET------TTT---STTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCcccccC------CCc---cCCCCccEEEEec
Confidence 9998653 456666666543311111 111 3467889988874
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.67 E-value=0.23 Score=44.87 Aligned_cols=113 Identities=6% Similarity=-0.031 Sum_probs=70.8
Q ss_pred cceEEEecCcceEEEEEcCccceeeeeccc--cccceeeeEeecCccccccCCcEEEEEe-CccceEEeeeccceehhhh
Q psy10942 16 SEFSVHCGRDKVLFTWDLSSRKQLRSYPAY--ESLETCAVFHLSDETESKSGGKTFVLAG-GEKSLLHYYETSAVKELYQ 92 (537)
Q Consensus 16 ~~~l~s~~~~g~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~wd~~~~~~~~~ 92 (537)
+..++.++.||.|.-.|.++|+.+=+++.. .+.... ..+. ...++..++.. ..||.|..++..+|.....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~---~~~~----~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEI---QEPS----RLETYETLIIEPFGDGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEEC---CCSC----TTTSSEEEEECCSTTTEEEEEETTTEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEe---cCCc----cccCCcEEEEEECCCCEEEEEECCCCcEEee
Confidence 457888999999999999999998888754 121111 0011 01133444443 5799999999888865433
Q ss_pred cCCCcceE--EEEEe-----------ccccEEEEEeCCceEEEEecccccCcccccccccceeEEee
Q psy10942 93 HGLSSPLV--RIVRS-----------SVKRMYAVVTADHNISLYRLNSETGLEERPNKILKFRKQFV 146 (537)
Q Consensus 93 ~~~~~~v~--~~~~s-----------~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 146 (537)
+.....+. -+... ..+..+++++.++.+.-.|+.+ ++.+..+.
T Consensus 83 ~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t-----------G~~~W~~~ 138 (339)
T 2be1_A 83 LSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN-----------GEIISAFG 138 (339)
T ss_dssp EEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTT-----------CCEEEEES
T ss_pred eccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCC-----------CcEEEEEe
Confidence 33221110 01111 1455778889999999999999 67776665
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.06 E-value=1.1 Score=40.86 Aligned_cols=108 Identities=12% Similarity=0.103 Sum_probs=58.3
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeE---e----ecCCcceEEEEEecC---CCEEEEEe-C-------C
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKS---L----EGHDASVLRCHFINK---GTQIVSTG-A-------D 475 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~----~~~~~~v~~~~~s~~---~~~l~s~~-~-------d 475 (537)
....|+|.|+|+.|+++...|.|++++.. ++.... + .........++++|+ +..|+.+. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 56789999999834445567999999853 332211 1 112345789999996 45554442 2 2
Q ss_pred CcEEEEECCCC--ee--EEE-ecCCccceeccCCCCCCccccccceeeecCCCEEEEEeC
Q psy10942 476 GLLKLWSIKTS--TC--VST-FDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530 (537)
Q Consensus 476 g~v~vwd~~~~--~~--~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~ 530 (537)
..|..|++..+ .. ... +..-... ....+.+..+ +|.|||.+.++.+.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~-----~~~~h~~~~l---~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKL-----STGNHFGGRL---VFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCC-----BSSSCCCCCE---EECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCC-----CCCcccCccE---EECCCCcEEEEECC
Confidence 34666665432 11 111 1110000 0011223567 99999976666543
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.82 E-value=6.7 Score=34.94 Aligned_cols=66 Identities=11% Similarity=0.098 Sum_probs=35.7
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCcee--eeEeecCCcceEEEEEecCCCEEEEEeCC--------------CcEEEE
Q psy10942 423 LDRILISSSGD-----ATIKLWCLTDYVC--LKSLEGHDASVLRCHFINKGTQIVSTGAD--------------GLLKLW 481 (537)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~v~vw 481 (537)
++++++.|+.+ ..+.+||+.+.+- +..+....... +++ ..++++++.|+.+ ..+.+|
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEE-EECCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 45667776543 3577889876432 22222111111 222 2356677777643 358888
Q ss_pred ECCCCeeEE
Q psy10942 482 SIKTSTCVS 490 (537)
Q Consensus 482 d~~~~~~~~ 490 (537)
|+.+.+=..
T Consensus 284 d~~~~~W~~ 292 (318)
T 2woz_A 284 EDDKKEWAG 292 (318)
T ss_dssp ETTTTEEEE
T ss_pred eCCCCEehh
Confidence 988765433
No 343
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.53 E-value=5.8 Score=35.58 Aligned_cols=103 Identities=11% Similarity=0.043 Sum_probs=66.4
Q ss_pred CcceEEEecCcceEEEEEcCccceee-------eeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeecc--
Q psy10942 15 TSEFSVHCGRDKVLFTWDLSSRKQLR-------SYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETS-- 85 (537)
Q Consensus 15 ~~~~l~s~~~~g~v~iwd~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~-- 85 (537)
+..++++++++|.++--.++..+..+ .++..+.+..+ .... ....++..+.+|.+..+...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~--~~~~--------~~d~ill~T~~G~~~rf~~~~~ 177 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGA--VLCS--------AGDDLLLVSANGQSIRFSATDE 177 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEE--EEEC--------TTCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEE--EEec--------CCCEEEEEECCCeEEEEECccc
Confidence 57899999999999998876643322 23233333333 3333 22346666668877666655
Q ss_pred c---------eehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942 86 A---------VKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS 127 (537)
Q Consensus 86 ~---------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 127 (537)
. |.....+...+.|.++...+++.+|+.++..|.++.-.+..
T Consensus 178 eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 178 ALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp TSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred ccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 2 22233344456788888777777889999999988887665
No 344
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.55 E-value=7.4 Score=36.94 Aligned_cols=52 Identities=12% Similarity=-0.004 Sum_probs=33.6
Q ss_pred eeeEEEEcCCCC-EEEEEeCCCcEEEEECCCc---eeeeEee---------cCCcceEEEEEecC
Q psy10942 414 GVWFVNFSPLDR-ILISSSGDATIKLWCLTDY---VCLKSLE---------GHDASVLRCHFINK 465 (537)
Q Consensus 414 ~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~---------~~~~~v~~~~~s~~ 465 (537)
..+.|+|.||+. .|+++...|.|++++.... +.+..+. ........|+|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 567899999985 4455567899999975422 1222211 11356789999996
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.12 E-value=17 Score=32.03 Aligned_cols=155 Identities=10% Similarity=0.034 Sum_probs=79.0
Q ss_pred CeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEccCCceeeEEEEecC------CCC
Q psy10942 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGS--LDKTVKVWSTTGGLKLLNVLRGHK------KGT 366 (537)
Q Consensus 295 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~------~~~ 366 (537)
..|+..++.+.+... +.. . .+..|+++++.|+-.. .++.-.|+.+...+.....+..+. .++
T Consensus 88 ~~Iy~i~~dg~~~~~------l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~~~~~~~g~ 157 (302)
T 3s25_A 88 NSLCRIKRNGHGSTV------LDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTCNTSDR 157 (302)
T ss_dssp EEEEEEETTSCCCEE------EEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCCCCSEEETT
T ss_pred CeEEEEeCCCCcceE------eec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCceEeeEECC
Confidence 467777777665311 111 1 1236788888888776 344444444332233333343332 244
Q ss_pred EEEEEcC-CCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCC--CcEEEEECCC
Q psy10942 367 QIVSTGA-DGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD--ATIKLWCLTD 443 (537)
Q Consensus 367 ~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~d~~~ 443 (537)
.|.-.+. ..+|...++..+.....+.+ .. ...++|++.+|+-...+ ..|..-++..
T Consensus 158 ~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--------------------~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTASQSEALFYDC--------------------NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEEECTTTCCEEEEETTTTEEEEEECS--------------------CE-EEEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEEEEeCCCceEEEEECCCCCEEEEeCC--------------------Cc-cceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 4443332 45666666655543322221 11 12345788887776544 3566666655
Q ss_pred ceeeeEeecCCcceEEEEEecCCCEEEEEeC--CCcEEEEECCC
Q psy10942 444 YVCLKSLEGHDASVLRCHFINKGTQIVSTGA--DGLLKLWSIKT 485 (537)
Q Consensus 444 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~v~vwd~~~ 485 (537)
.. ...+.. ..+ ..|+|++.+|+-++. .+.|..-+++.
T Consensus 217 ~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 217 PN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp CC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred CC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 43 333331 223 347888888876533 35566666643
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.41 E-value=25 Score=37.02 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=32.9
Q ss_pred eeeEEEEcCCCCEEEEEeCCCcEEEEECCCceeeeEee
Q psy10942 414 GVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLE 451 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 451 (537)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677788888999999999999999999999887753
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.89 E-value=28 Score=30.34 Aligned_cols=158 Identities=12% Similarity=0.103 Sum_probs=77.6
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce---------eeEEEEecCC
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK---------LLNVLRGHKK 364 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~---------~~~~~~~~~~ 364 (537)
||.++.|-.....++- ........|..++...+. .++. . ||.++.|-.....+ .+..+..-
T Consensus 41 ~G~v~~wG~n~~Gqlg-----~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G-- 110 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLT-----MPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAG-- 110 (282)
T ss_dssp TTEEEEEECCSSSTTS-----CCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEE--
T ss_pred CCEEEEEeCCCCCCCC-----CCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECc--
Confidence 8999999766543211 111123457777776443 3444 4 89999997653221 12222221
Q ss_pred CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942 365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY 444 (537)
Q Consensus 365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 444 (537)
....+.-. +|.+..|-....-.+........ .|..++...+.. ++ -. ||.|..|-....
T Consensus 111 ~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~-----------------~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 111 AWASYALK-DGKVIAWGDDSDGQTTVPAEAQS-----------------GVTALDGGVYTA-LA-VK-NGGVIAWGDNYF 169 (282)
T ss_dssp TTEEEEEE-TTEEEEEECCTTSTTSCCGGGGS-----------------SEEEEEECSSEE-EE-EE-TTEEEEEECCTT
T ss_pred CCEEEEEe-CCeEEEecCCCCCcCCCCccCCC-----------------CeEEEEcccCEE-EE-EE-CCEEEEecCCCC
Confidence 33444455 99999997654322111001111 333333332222 22 22 577777765432
Q ss_pred eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
-.+..-..-...|..++...+. .++. .||.|+.|-...
T Consensus 170 gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred CCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence 1111111113457777665442 2333 589999997543
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.25 E-value=52 Score=33.15 Aligned_cols=191 Identities=11% Similarity=0.076 Sum_probs=94.1
Q ss_pred eEEEEEeCC----CeEEEEECCCCceeeeeec---ccccccCCCeEEEEEcCCCCEEEEEeCCC------cEEEEEccCC
Q psy10942 286 ELLASGSLD----KTVKVWSTTGGLKLLNVLR---GHKKGHEKDINCVTVSPNDKLLASGSLDK------TVKVWSTTGG 352 (537)
Q Consensus 286 ~~l~~~~~d----~~i~i~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~d~------~i~i~d~~~~ 352 (537)
..++.|+.+ ..+.+||..+..-...... .........-..+.+..++++++.|+.++ .+.+||+..
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t- 477 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT- 477 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT-
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC-
Confidence 355666543 4688899887653221100 00111111223333332677778877543 477888773
Q ss_pred ceeeE-----------EEEecCCCCEEEEEcCCC--cEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEE
Q psy10942 353 LKLLN-----------VLRGHKKGTQIVSTGADG--LLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVN 419 (537)
Q Consensus 353 ~~~~~-----------~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~ 419 (537)
..-.. ....-.++..++.|+.++ .+.+||..+.+-...-.... .|.... ....+.
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~--------~p~~r~----~~~a~v 545 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE--------FFQNSL----VSAGLE 545 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSG--------GGGSCC----BSCEEE
T ss_pred CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCC--------CCCccc----ceeEEE
Confidence 21111 111112456666666544 68888887765332211000 011110 223344
Q ss_pred EcCC-CCEEEEEeC--C-----CcEEEEECCCcee-----eeEeecC--Ccc-eEEEEEecCCCEEEEEeC--------C
Q psy10942 420 FSPL-DRILISSSG--D-----ATIKLWCLTDYVC-----LKSLEGH--DAS-VLRCHFINKGTQIVSTGA--------D 475 (537)
Q Consensus 420 ~s~~-~~~l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~~--~~~-v~~~~~s~~~~~l~s~~~--------d 475 (537)
+..+ +++++.|+. + ..+.+||+.+.+. -..+... ... -.+++...++++++.|+. .
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 625 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRT 625 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTT
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCC
Confidence 5554 666777765 2 4588999887651 1111111 111 112333343677777774 3
Q ss_pred CcEEEEECCCCeeE
Q psy10942 476 GLLKLWSIKTSTCV 489 (537)
Q Consensus 476 g~v~vwd~~~~~~~ 489 (537)
..+.+||+.+.+-.
T Consensus 626 ~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 626 NSIISLDPLSETLT 639 (695)
T ss_dssp TSEEEEETTTTEEE
T ss_pred CeEEEEECCCCeEE
Confidence 46999999877543
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.82 E-value=16 Score=35.30 Aligned_cols=91 Identities=18% Similarity=0.213 Sum_probs=59.2
Q ss_pred EEEEEcCc----c-ceeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccceehhh-----------
Q psy10942 28 LFTWDLSS----R-KQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAVKELY----------- 91 (537)
Q Consensus 28 v~iwd~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~~~~~----------- 91 (537)
|.+-|.+. + ..++.+|.......+ -..|+ +...++.+..+.++.++|+++...+.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv--~vsPD-------Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~ 370 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGC--NTSSD-------GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI 370 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCE--EECTT-------SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE
T ss_pred eeEEccccccccCCceEEEEeCCCCCcce--eeCCC-------CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccce
Confidence 55666554 2 344455655666666 55773 44445555678889999998643321
Q ss_pred --hcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942 92 --QHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS 127 (537)
Q Consensus 92 --~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 127 (537)
.....-.....+|.++|....+..-|..|..|++..
T Consensus 371 ~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 371 VGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred EeeccCCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 122223678899999996566666899999999986
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.75 E-value=33 Score=32.49 Aligned_cols=29 Identities=14% Similarity=-0.049 Sum_probs=21.6
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEEcc
Q psy10942 322 DINCVTVSPNDK-LLASGSLDKTVKVWSTT 350 (537)
Q Consensus 322 ~v~~~~~s~~~~-~l~~~~~d~~i~i~d~~ 350 (537)
....|+|.|+|. .|+++...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 357899999986 45556678888888654
No 351
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=78.68 E-value=27 Score=30.27 Aligned_cols=103 Identities=8% Similarity=-0.023 Sum_probs=65.0
Q ss_pred CcceEEEecCcceEEEEEcCccc------eeeeeccccccceeeeEeecCccccccCCcEEEEEeCccceEEeeeccce-
Q psy10942 15 TSEFSVHCGRDKVLFTWDLSSRK------QLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEKSLLHYYETSAV- 87 (537)
Q Consensus 15 ~~~~l~s~~~~g~v~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wd~~~~- 87 (537)
+..+++..+++|.++-..++... ....++..+.+..+ .... +...++..+.+|.+..++...-
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~--~~~~--------~~~~ill~T~~G~~~r~~~~eip 148 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSI--ASSV--------DETHILLFTKKGRVARFSVREVP 148 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEE--EECC--------SSCEEEEEETTSEEEEEEGGGSC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEE--EEeC--------CCCEEEEEECCCEEEEEEhhhCC
Confidence 55789999999999999876653 11123233333333 2232 2235666667888777765432
Q ss_pred --------ehhhhcCCCcceEEEEEeccccEEEEEeCCceEEEEeccc
Q psy10942 88 --------KELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNS 127 (537)
Q Consensus 88 --------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 127 (537)
.....+...+.|.++...+++.+++.++..|.++...+..
T Consensus 149 ~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 149 PSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp BCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred CcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 1222344446788877767777888889999988887765
No 352
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=77.12 E-value=42 Score=30.32 Aligned_cols=66 Identities=11% Similarity=0.056 Sum_probs=40.2
Q ss_pred cceEEEEEec-------CCCEEEEEeCCCcEEEEECCCCeeEEE--e-cCCccceeccCCCCCCccccccceeeecCCCE
Q psy10942 455 ASVLRCHFIN-------KGTQIVSTGADGLLKLWSIKTSTCVST--F-DKHALKIRNSDSENDHKGFGLPRQLCSRNSDC 524 (537)
Q Consensus 455 ~~v~~~~~s~-------~~~~l~s~~~dg~v~vwd~~~~~~~~~--~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 524 (537)
.....++|.. ++.++++.-..+.|...+++.++.... + ......+ ..+ ++.|||.+
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp-----------~~v---~~~pdG~l 336 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRI-----------RDV---RTGPDGYL 336 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCE-----------EEE---EECTTSCE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCce-----------eEE---EECCCCcE
Confidence 3567788864 466666666677788887776544322 1 1111233 777 99999997
Q ss_pred EEEEe-CCCCE
Q psy10942 525 EYRGG-WSPQV 534 (537)
Q Consensus 525 l~s~~-~dg~i 534 (537)
+++.. .+|.|
T Consensus 337 yv~td~~~g~I 347 (353)
T 2g8s_A 337 YVLTDESSGEL 347 (353)
T ss_dssp EEEECSTTEEE
T ss_pred EEEEeCCCCEE
Confidence 66543 34544
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.40 E-value=5.6 Score=41.90 Aligned_cols=37 Identities=19% Similarity=0.137 Sum_probs=31.7
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP 43 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~ 43 (537)
|.+++.. ++..+++|.+.|+++|+|++.+++++.+..
T Consensus 238 ~~~~~~~--~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFL--STYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEE--TTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeec--CCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4556666 788899999999999999999999998765
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=75.92 E-value=48 Score=30.32 Aligned_cols=70 Identities=13% Similarity=0.275 Sum_probs=42.3
Q ss_pred eeeEEEEcCC----CCEEEEEeCCCcEEEEECCC-----c---eeeeEeecCC---cceEEEEEe-cCCCEEEEEeCCCc
Q psy10942 414 GVWFVNFSPL----DRILISSSGDATIKLWCLTD-----Y---VCLKSLEGHD---ASVLRCHFI-NKGTQIVSTGADGL 477 (537)
Q Consensus 414 ~i~~~~~s~~----~~~l~~~~~dg~i~i~d~~~-----~---~~~~~~~~~~---~~v~~~~~s-~~~~~l~s~~~dg~ 477 (537)
++..|+++|+ ++.|......+ -++|.+.+ . ..+..+ +.. ..-..++.. .+|.++++--..+.
T Consensus 221 Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a 298 (381)
T 3q6k_A 221 GIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQ 298 (381)
T ss_dssp CEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSE
T ss_pred CceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCe
Confidence 7888889888 77777766544 23443322 1 111111 122 223345675 57777777778889
Q ss_pred EEEEECCC
Q psy10942 478 LKLWSIKT 485 (537)
Q Consensus 478 v~vwd~~~ 485 (537)
|..|+..+
T Consensus 299 I~~w~~~~ 306 (381)
T 3q6k_A 299 VSCWNTQK 306 (381)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 99999865
No 355
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=73.72 E-value=48 Score=29.34 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=43.1
Q ss_pred CCCEEEEEeCCCcEEEEECCC-------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 423 LDRILISSSGDATIKLWCLTD-------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
+..+++..+.+|.++...+.. |.....+.. .+.+..+....+...++..+.+|.+..+....
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRD 181 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHH
Confidence 456788889999999887753 333333443 45566666655566788889999988887643
No 356
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=70.30 E-value=59 Score=28.93 Aligned_cols=60 Identities=13% Similarity=0.209 Sum_probs=40.6
Q ss_pred CCEEEEEeCCCcEEEEECCCc--------eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 424 DRILISSSGDATIKLWCLTDY--------VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
+.+++..+.+|.++-..+... .....+.. .+.+..+........|+..+.+|.+..+...
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ 173 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDES 173 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGG
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHH
Confidence 567888999999999877532 22223332 2556555555555678888889988888764
No 357
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=69.45 E-value=64 Score=29.04 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=34.7
Q ss_pred EEEEEeCCCeEEEEECCCCceee-eeecccccccCCCeEEEEEcCC---CCEEEEE-e--CCCcEEEEEcc
Q psy10942 287 LLASGSLDKTVKVWSTTGGLKLL-NVLRGHKKGHEKDINCVTVSPN---DKLLASG-S--LDKTVKVWSTT 350 (537)
Q Consensus 287 ~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~-~--~d~~i~i~d~~ 350 (537)
++++-...|.|++++..++.... ..+.............|+++|+ +..|++. + .++.|.-|.+.
T Consensus 45 llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 45 LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 34444347888888765544311 1101122234567899999995 3445443 2 34556666655
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.83 E-value=20 Score=35.06 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=42.3
Q ss_pred eeeEEEEcCCCCEEEEEeCC------------CcEEEEECCCceeeeEeecC-CcceEEEEEecCCCEEEEE
Q psy10942 414 GVWFVNFSPLDRILISSSGD------------ATIKLWCLTDYVCLKSLEGH-DASVLRCHFINKGTQIVST 472 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~ 472 (537)
..-.|+|+|+|+++++-..+ ..+.+.+..+++..+.+.++ ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34568899999877665432 24556666777776666654 3569999999999988776
No 359
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=67.59 E-value=65 Score=28.38 Aligned_cols=193 Identities=11% Similarity=0.057 Sum_probs=0.0
Q ss_pred CCCCEEEEEeCCCcEEEEEccC-----------------CceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCeeeeeec
Q psy10942 330 PNDKLLASGSLDKTVKVWSTTG-----------------GLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD 392 (537)
Q Consensus 330 ~~~~~l~~~~~d~~i~i~d~~~-----------------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 392 (537)
|+...+++.+.+|.|+--.+.. ....+...........++..+..|.++-+....-.....-.
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Q ss_pred cCCcceEEEEEecCCCceEEeeeeEEEEc---CCCCEEEEEeCCCcEEEEECC-------CceeeeEeecCCcceEEEEE
Q psy10942 393 KHALKIWTLAITKDENQIITGGVWFVNFS---PLDRILISSSGDATIKLWCLT-------DYVCLKSLEGHDASVLRCHF 462 (537)
Q Consensus 393 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~s---~~~~~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~ 462 (537)
....-+.-+.+.++. .|.++..- +++.+++..+.+|.++-..+. .+.....+..+ +.+..+..
T Consensus 81 ~G~~i~~~l~l~~~e------~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~ 153 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDE------RITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDL 153 (307)
T ss_dssp CCEEGGGTSCCCTTC------CEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEE
T ss_pred CCeEhhhccCCCCCC------EEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEE
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeecCCCEEEEEeCCCCEE
Q psy10942 463 INKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGWSPQVV 535 (537)
Q Consensus 463 s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~dg~i~ 535 (537)
..+...++..+.+|.+..++... +.........+..+.........++ ...+++..|++.+..|.++
T Consensus 154 ~~~~~~i~l~T~~G~~irf~~~~---v~~~gr~a~Gv~~i~L~~~d~Vv~~---~~~~~~~~ll~~T~~G~~K 220 (307)
T 1zi0_A 154 TSGEDEVMLFSAEGKVVRFKESS---VRAMGCNTTGVRGIRLGEGDKVVSL---IVPRGDGAILTATQNGYGK 220 (307)
T ss_dssp ECTTCEEEEEETTSEEEEEEGGG---SCBCCTTCCCEECCCCCTTCCEEEE---ECCCSSCEEEEEETTSEEE
T ss_pred eCCCCEEEEECCCCcEEEEEHHH---cCccCCCCCCeEeEEeCCCCEEEEE---EEecCCCEEEEEEcCCceE
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.55 E-value=21 Score=38.55 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=32.7
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q psy10942 456 SVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493 (537)
Q Consensus 456 ~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 493 (537)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566777888999999999999999999999988754
No 361
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=67.10 E-value=75 Score=28.91 Aligned_cols=196 Identities=11% Similarity=0.059 Sum_probs=0.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEE------------------EEccCCceeeEEEEecCCCCEEEEEcCCCcEEEEECCCCee
Q psy10942 326 VTVSPNDKLLASGSLDKTVKV------------------WSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTC 387 (537)
Q Consensus 326 ~~~s~~~~~l~~~~~d~~i~i------------------~d~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 387 (537)
+.+-|+...+++.+.+|.|+- ..++ ....+..+..-.....++..+..|.+.-+....-..
T Consensus 1 ~dlI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~ 79 (370)
T 3l6v_A 1 MDLIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPE 79 (370)
T ss_dssp CCCCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred CCcccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcC
Q ss_pred eeeeccCCcceEEEEEecCCCceEEeeeeEEEEcC---CCCEEEEEeCCCcEEEEECCC-------ceeeeEeecCCcce
Q psy10942 388 VSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP---LDRILISSSGDATIKLWCLTD-------YVCLKSLEGHDASV 457 (537)
Q Consensus 388 ~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v 457 (537)
.........-+.-+.+.++. .|.++..-+ ++.+|+.++..|.++...+.. +.....++. .+.+
T Consensus 80 ~~r~a~G~~i~~ll~L~~~e------~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~l 152 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLESGE------RVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDAL 152 (370)
T ss_dssp CCTTSCCEEGGGSCCCCTTC------CEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCE
T ss_pred CCcccCCcCHhhccCCCCCC------EEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEE
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecCCccceeccCCCCCCccccccceeeec-----------------
Q psy10942 458 LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSR----------------- 520 (537)
Q Consensus 458 ~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~----------------- 520 (537)
..+........|+..+.+|.+..+.. ..+.........++.+.........++ ...+
T Consensus 153 v~v~~~~~~~~i~l~T~~G~~irf~~---~~v~~~gR~a~GV~~i~L~~~d~Vv~~---~~~~~~~~~~~~~~~~~~~~~ 226 (370)
T 3l6v_A 153 VGVALTDGDRDVLLFASNGKTVRFGE---STVRSMGRTATGVRGIRLAKGEEVVSL---IVSERAGGVEDEVEDESAEEV 226 (370)
T ss_dssp EEEEEECSCCEEEEEETTSEEEEEEG---GGSCBCCTTCCCEECCCCCTTCCEEEE---EEECCC---------------
T ss_pred EEEEEeCCCceEEEEeCCCeEEEEEc---cccCccCCCCCCeeeEEeCCCCEEEEE---EEecccccccccccccccccc
Q ss_pred ------------------CCCEEEEEeCCCCEE
Q psy10942 521 ------------------NSDCEYRGGWSPQVV 535 (537)
Q Consensus 521 ------------------~~~~l~s~~~dg~i~ 535 (537)
++..|++.+..|..+
T Consensus 227 ~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gK 259 (370)
T 3l6v_A 227 VETTDGAEPAVIDVADNGDVAYILTATENGYGK 259 (370)
T ss_dssp --------------------CEEEEEETTSEEE
T ss_pred ccccccccccccccccccCCceEEEeeCCCCEE
No 362
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.07 E-value=71 Score=32.19 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=40.4
Q ss_pred CCCCEEEEEeCCC--cEEEEECCCceeeeEe-----ecCCcceEEEEEecC-CCEEEEEeC--C-----CcEEEEECCCC
Q psy10942 422 PLDRILISSSGDA--TIKLWCLTDYVCLKSL-----EGHDASVLRCHFINK-GTQIVSTGA--D-----GLLKLWSIKTS 486 (537)
Q Consensus 422 ~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~s~~-~~~l~s~~~--d-----g~v~vwd~~~~ 486 (537)
.++++++.|+.++ .+.+||..+.+-...- ......-..+.+..+ +++++.|+. + +.+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4788888887654 6899998875432211 111112233555655 667777765 2 35889998877
Q ss_pred e
Q psy10942 487 T 487 (537)
Q Consensus 487 ~ 487 (537)
+
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 6
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.69 E-value=27 Score=34.92 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=26.6
Q ss_pred CcceEEEecCcceEEEEEcCccceeeeecc
Q psy10942 15 TSEFSVHCGRDKVLFTWDLSSRKQLRSYPA 44 (537)
Q Consensus 15 ~~~~l~s~~~~g~v~iwd~~~~~~~~~~~~ 44 (537)
+..++++.+.|.++|+||+++++++.....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 467999999999999999999999987664
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.57 E-value=7.2 Score=42.13 Aligned_cols=37 Identities=19% Similarity=0.137 Sum_probs=30.9
Q ss_pred eeeeeeeccCCcceEEEecCcceEEEEEcCccceeeeec
Q psy10942 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYP 43 (537)
Q Consensus 5 V~~~~~~~~~~~~~l~s~~~~g~v~iwd~~~~~~~~~~~ 43 (537)
|.+++.. ++..++++.+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~--~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFL--STYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEE--TTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeecc--CCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3344555 688899999999999999999999998765
No 365
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=62.55 E-value=42 Score=30.68 Aligned_cols=96 Identities=17% Similarity=0.179 Sum_probs=53.8
Q ss_pred eEEEEEcCcc--ceeeeecccccc-------ceeeeEee-cCccccccCCcEEEEEe-CccceEEeeeccceehhhhcC-
Q psy10942 27 VLFTWDLSSR--KQLRSYPAYESL-------ETCAVFHL-SDETESKSGGKTFVLAG-GEKSLLHYYETSAVKELYQHG- 94 (537)
Q Consensus 27 ~v~iwd~~~~--~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~i~~wd~~~~~~~~~~~- 94 (537)
.|.+||+++. +.++++...+.+ ..+.+-.. |.+ .. +..+++.+ ...+.|.|+|+.+++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~---~c-~~~~aYItD~~~~gLIVydl~~~~swRv~~~ 199 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG---DC-SETFVYITNFLRGALFIYDHKKQDSWNVTHP 199 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT---TS-CSEEEEEEETTTTEEEEEETTTTEEEEEECG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC---CC-CccEEEEEcCCCCcEEEEECCCCcEEEEccC
Confidence 6889999999 999877643322 22211101 100 01 13444433 346679999999876544331
Q ss_pred ---C---------------CcceEEEEEecc----ccEEEEEeCCceEEEEeccc
Q psy10942 95 ---L---------------SSPLVRIVRSSV----KRMYAVVTADHNISLYRLNS 127 (537)
Q Consensus 95 ---~---------------~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~~ 127 (537)
. ...|..|++||+ ++.|....-.+ -++|.+.+
T Consensus 200 ~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T 253 (381)
T 3q6k_A 200 TFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNT 253 (381)
T ss_dssp GGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEH
T ss_pred CCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEH
Confidence 0 036777888887 56666554432 34555554
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.48 E-value=36 Score=32.98 Aligned_cols=60 Identities=12% Similarity=0.023 Sum_probs=43.1
Q ss_pred eeeEEEEcCCCCEEEEEeC------------CCcEEEEECCCceeeeEeecC-CcceEEEEEecCCCEEEEEe
Q psy10942 414 GVWFVNFSPLDRILISSSG------------DATIKLWCLTDYVCLKSLEGH-DASVLRCHFINKGTQIVSTG 473 (537)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~ 473 (537)
....|+|+++|.+.++... ...+..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5677899999987774332 125667777777766666543 35689999999999888764
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.09 E-value=29 Score=33.69 Aligned_cols=60 Identities=13% Similarity=0.029 Sum_probs=42.5
Q ss_pred ceEEEEEecCCCEEEEEeC------------CCcEEEEECCCCeeEEEecCC-ccceeccCCCCCCccccccceeeecCC
Q psy10942 456 SVLRCHFINKGTQIVSTGA------------DGLLKLWSIKTSTCVSTFDKH-ALKIRNSDSENDHKGFGLPRQLCSRNS 522 (537)
Q Consensus 456 ~v~~~~~s~~~~~l~s~~~------------dg~v~vwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~ 522 (537)
....|.|.++|.+.+.... .+.|..++..++++...+.+. ...+ +.+ +||||+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEp-----------nGi---afSPD~ 542 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEV-----------TGI---SFSPDQ 542 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEE-----------EEE---EECTTS
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccc-----------cCC---EECCCC
Confidence 4578999999987774332 125777777778876666543 2355 788 999999
Q ss_pred CEEEEEe
Q psy10942 523 DCEYRGG 529 (537)
Q Consensus 523 ~~l~s~~ 529 (537)
+.|+++-
T Consensus 543 ktLfV~v 549 (592)
T 4a9v_A 543 KTLFVGI 549 (592)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 9998763
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.32 E-value=23 Score=34.70 Aligned_cols=58 Identities=14% Similarity=0.050 Sum_probs=42.0
Q ss_pred eEEEEEecCCCEEEEEeCC------------CcEEEEECCCCeeEEEecCCc-cceeccCCCCCCccccccceeeecCCC
Q psy10942 457 VLRCHFINKGTQIVSTGAD------------GLLKLWSIKTSTCVSTFDKHA-LKIRNSDSENDHKGFGLPRQLCSRNSD 523 (537)
Q Consensus 457 v~~~~~s~~~~~l~s~~~d------------g~v~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~s~~~~ 523 (537)
.-.|+|+|.|++++.-..+ +.+.+.+..++++...+.++. ..+ +.+ +|+||++
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~-----------TG~---~fspDg~ 543 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEV-----------TGI---SFSPDQK 543 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEE-----------EEE---EECTTSS
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccC-----------cCe---eECCCCC
Confidence 4678999999977665432 235666777788777666553 456 888 9999999
Q ss_pred EEEEE
Q psy10942 524 CEYRG 528 (537)
Q Consensus 524 ~l~s~ 528 (537)
.|++.
T Consensus 544 tlfvn 548 (592)
T 3zwu_A 544 TLFVG 548 (592)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98875
No 369
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=51.23 E-value=1.2e+02 Score=26.19 Aligned_cols=158 Identities=13% Similarity=0.083 Sum_probs=78.1
Q ss_pred CCeEEEEECCCCceeeeeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce---------eeEEEEecCC
Q psy10942 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK---------LLNVLRGHKK 364 (537)
Q Consensus 294 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~---------~~~~~~~~~~ 364 (537)
||.|+.|-.....++- ....-...|..++...+. .+.-. ||.|+.|-.....+ .+..+..-
T Consensus 80 ~G~v~~wG~n~~Gqlg-----~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G-- 149 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTT-----VPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG-- 149 (282)
T ss_dssp TTEEEEEECCTTSTTC-----CCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--
T ss_pred CCEEEEeeCCCCCCCC-----CCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--
Confidence 8999999766543211 111113468888776443 33334 89999997653221 12222221
Q ss_pred CCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy10942 365 GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY 444 (537)
Q Consensus 365 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 444 (537)
....+.-. ||.+..|-....-.+..-..... .|..++...+. .++. .||.|+.|-....
T Consensus 150 ~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~-----------------~v~~i~~G~~h-s~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 150 VYTALAVK-NGGVIAWGDNYFGQTTVPAEAQS-----------------GVDDVAGGIFH-SLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp SSEEEEEE-TTEEEEEECCTTSTTSCCGGGGS-----------------SEEEEEECSSE-EEEE--ETTEEEEEECCTT
T ss_pred cCEEEEEE-CCEEEEecCCCCCCCCCceecCC-----------------CeEEEEecCCE-EEEE--ECCeEEEEECCCC
Confidence 22333334 78888887654322211000011 34444433332 2333 4788888865432
Q ss_pred eeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 445 VCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 445 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
-.+..-......|..++..... .++.. ||.|+.|-...
T Consensus 209 gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 209 KQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp STTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEEESTTC
T ss_pred CCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEEecCCC
Confidence 1111111112357777665443 33333 99999997544
No 370
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.85 E-value=22 Score=35.55 Aligned_cols=36 Identities=17% Similarity=0.359 Sum_probs=29.2
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEEecC
Q psy10942 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 494 (537)
Q Consensus 457 v~~~~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 494 (537)
|.++.+ +..++++-+.|+++|+|++.+++++....-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444433 467999999999999999999998887654
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=45.67 E-value=1.5e+02 Score=25.59 Aligned_cols=108 Identities=14% Similarity=0.103 Sum_probs=64.3
Q ss_pred CCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy10942 364 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD 443 (537)
Q Consensus 364 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (537)
+...++..+.+|.++...+.... .. ...+..+.+..+. .+..+........++..+..|.+..++...
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~-~~-----~~G~~~i~lkegD------~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFE-YK-----AQGMPIIKLTEGD------EVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTT-TC-----STTEECSCCCTTC------CEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCEEEEEEHHHhh-hh-----cCCeEEEecCCCC------EEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 45678888888888887765432 00 0111112221111 233333444556788888889988887543
Q ss_pred ---------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 444 ---------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 444 ---------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
|.....+.. ...|..+...+++..++..+..|.++...+.
T Consensus 147 ip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 147 VPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp SCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred CCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 222223332 3556666666667789999999999888764
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=40.62 E-value=2e+02 Score=25.59 Aligned_cols=186 Identities=13% Similarity=0.057 Sum_probs=98.4
Q ss_pred eEEEEEeCCCeEEEEECCCCceee----eeecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcc-----------
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLL----NVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT----------- 350 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~----------- 350 (537)
..+++.+.+|.|+--.+.+..... ......++ ....+..+........|+.-+..|.++-....
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 356777888888866533211000 00001111 23345555444455556656667766655432
Q ss_pred ----------CCceeeEEEEec--CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942 351 ----------GGLKLLNVLRGH--KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV 418 (537)
Q Consensus 351 ----------~~~~~~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~ 418 (537)
...+.+..+... ++...++..+.+|.++...+........ ..+..+.+..+. .+..+
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-----~G~~~i~lke~D------~lv~~ 151 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-----GGIVAVNLRDND------ELVGA 151 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-----SCEESCBCCTTC------CEEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-----CceEEEEECCCC------EEEEE
Confidence 112223333333 2477899999999998877654221110 111111111111 23333
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECC--C---------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10942 419 NFSPLDRILISSSGDATIKLWCLT--D---------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIK 484 (537)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~--~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~ 484 (537)
........++..+..|.+..+... . |.....+. ....|.++...+++.+|+..+..|.++.-.+.
T Consensus 152 ~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 152 VLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 333345567777888988888766 3 22222333 23457777666666789999999998887764
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=35.45 E-value=2.5e+02 Score=25.39 Aligned_cols=26 Identities=4% Similarity=-0.019 Sum_probs=15.9
Q ss_pred ceEEEEEecc--ccEEEEEeCCceEEEE
Q psy10942 98 PLVRIVRSSV--KRMYAVVTADHNISLY 123 (537)
Q Consensus 98 ~v~~~~~s~~--~~~la~~~~d~~i~iw 123 (537)
.|.++++.|. ...|.+++..+.|...
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 5788999872 4555565555544433
No 374
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=34.00 E-value=2.2e+02 Score=24.17 Aligned_cols=61 Identities=10% Similarity=0.077 Sum_probs=41.6
Q ss_pred cEEEEEeCccceEEeeeccc-------eehhhhcCCCcceEEEEEe-ccccEEEEEeCCceEEEEeccc
Q psy10942 67 KTFVLAGGEKSLLHYYETSA-------VKELYQHGLSSPLVRIVRS-SVKRMYAVVTADHNISLYRLNS 127 (537)
Q Consensus 67 ~~~~~~~~~~~~i~~wd~~~-------~~~~~~~~~~~~v~~~~~s-~~~~~la~~~~d~~i~iwd~~~ 127 (537)
..+++.++..|.++...+.. |.....+...+.+..+... .++..++..+.+|.+..+....
T Consensus 95 ~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 95 DQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp TCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 35677888899999887754 2333334444566666665 3455788888889888888765
No 375
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=33.58 E-value=2.5e+02 Score=24.68 Aligned_cols=187 Identities=11% Similarity=0.056 Sum_probs=103.0
Q ss_pred eEEEEEeCCCeEEEEECCCCceeee----eecccccccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEccC----------
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKLLN----VLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG---------- 351 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~---------- 351 (537)
..++..+.+|.|+-..+..-..... .....+.. .+.+..+........++..+..|.++-+....
T Consensus 9 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G 87 (312)
T 1suu_A 9 NIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG 87 (312)
T ss_dssp EEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------
T ss_pred CEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCC
Confidence 4678888999999887654321100 00111122 23455555554556777778888877776531
Q ss_pred -----------CceeeEEEEec--CCCCEEEEEcCCCcEEEEECCCCeeeeeeccCCcceEEEEEecCCCceEEeeeeEE
Q psy10942 352 -----------GLKLLNVLRGH--KKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFV 418 (537)
Q Consensus 352 -----------~~~~~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~ 418 (537)
+...+..+... ....+++..+..|.++...+....... ...+..+.+.++. .+..+
T Consensus 88 ~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-----~~G~~~i~L~~~d------~lv~~ 156 (312)
T 1suu_A 88 QNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-----SRGVIVIKLNDKD------FVTSA 156 (312)
T ss_dssp CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC---------CEECBCCCTTC------CEEEE
T ss_pred cChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-----CCcEEEEecCCCC------EEEEE
Confidence 11222233322 145677888888888877664321111 1112222222222 23333
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCC---------ceeeeEeecCCcceEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10942 419 NFSPLDRILISSSGDATIKLWCLTD---------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485 (537)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~vwd~~~ 485 (537)
....+...++..+.+|.+..+.... |.....+.. ...|..+....++..+++.+..|..+...+..
T Consensus 157 ~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 157 EIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 3333455677888899988887654 223333432 34566666655666788889999988888743
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=25.63 E-value=3.7e+02 Score=24.23 Aligned_cols=26 Identities=8% Similarity=-0.275 Sum_probs=15.8
Q ss_pred ceEEEEEec-C-CCEEEEEeCCCcEEEE
Q psy10942 456 SVLRCHFIN-K-GTQIVSTGADGLLKLW 481 (537)
Q Consensus 456 ~v~~~~~s~-~-~~~l~s~~~dg~v~vw 481 (537)
.|.++++.| + ...|..++..+.|...
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 477888986 2 4456655555555444
No 377
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=22.67 E-value=4.5e+02 Score=24.08 Aligned_cols=59 Identities=8% Similarity=-0.037 Sum_probs=33.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCce-------------ee------EEEEecCCCCEEEEEcCCCcEEEEEC
Q psy10942 322 DINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK-------------LL------NVLRGHKKGTQIVSTGADGLLKLWSI 382 (537)
Q Consensus 322 ~v~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~-------------~~------~~~~~~~~~~~l~~~~~d~~i~i~d~ 382 (537)
.|..++.. +...+....||.|+.|-.....+ +. ............+....+|.|..|-.
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEEEEeC
Confidence 46666654 44556667889999996542110 10 01111112345566678999999985
No 378
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.67 E-value=2.8e+02 Score=26.40 Aligned_cols=56 Identities=13% Similarity=0.151 Sum_probs=37.3
Q ss_pred CEEEEEeCCCcEEEEECC-Cc-------eeeeEeec--CCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy10942 425 RILISSSGDATIKLWCLT-DY-------VCLKSLEG--HDASVLRCHFINKGTQIVSTGADGLLKL 480 (537)
Q Consensus 425 ~~l~~~~~dg~i~i~d~~-~~-------~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~v 480 (537)
..+..|..+|.|.-.-+. .+ ..+.++.- ...+|..|.++++..+|+.++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 457788889987544332 21 12223332 3578999999999999999998876554
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.07 E-value=2.5e+02 Score=26.71 Aligned_cols=61 Identities=16% Similarity=0.092 Sum_probs=36.3
Q ss_pred eEEEEEeCCCeEEEEECCCCcee---eeeecccc--cccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy10942 286 ELLASGSLDKTVKVWSTTGGLKL---LNVLRGHK--KGHEKDINCVTVSPNDKLLASGSLDKTVKV 346 (537)
Q Consensus 286 ~~l~~~~~d~~i~i~~~~~~~~~---~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i 346 (537)
..++.|..+|.|.-.-+...... .......+ .....+|..|.++++.+.|++++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 56778888887764443322110 00001111 123578899999999999999988775554
Done!