RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10942
(537 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 104 bits (259), Expect = 2e-25
Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 53/261 (20%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK---------------------------- 317
++ S S D T+KVW G L+GH
Sbjct: 30 SVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 88
Query: 318 ----------GHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--- 364
GH+ +++ V++ PN + S S DKT+K+W G + GH++
Sbjct: 89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-YCVKTFTGHREWVR 147
Query: 365 -------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG---G 414
GT I S D +++W + T C + +H + ++ + + G
Sbjct: 148 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 207
Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA 474
L+S S D TIK+W ++ +CL +L GHD V F + G I+S
Sbjct: 208 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 267
Query: 475 DGLLKLWSIKTSTCVSTFDKH 495
D L++W K C+ T + H
Sbjct: 268 DKTLRVWDYKNKRCMKTLNAH 288
Score = 92.9 bits (229), Expect = 2e-21
Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 53/224 (23%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
+ S S DKT+K+W G + GH++ V + + L+AS S D+TV+VW
Sbjct: 116 IVSASRDKTIKMWEVQTG-YCVKTFTGHREWV----RMVRPNQDGTLIASCSNDQTVRVW 170
Query: 348 STTGGLKLLNVLRGHKK------------------------------GTQIVSTGADGLL 377
+ LR H+ G ++S D +
Sbjct: 171 VVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 229
Query: 378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIK 437
K+W + T C+ T H V V F + ++S + D T++
Sbjct: 230 KMWDVSTGMCLMTLVGH-----------------DNWVRGVLFHSGGKFILSCADDKTLR 272
Query: 438 LWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481
+W + C+K+L H+ V F +V+ D +K+W
Sbjct: 273 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 91.0 bits (224), Expect = 9e-21
Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 8/179 (4%)
Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376
GH + V P ++ S S D T+KVW G L+GH Q +S G
Sbjct: 14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGK 72
Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436
L T + I T+ V+ P ++S+S D TI
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNV-------SSVSIMPNGDHIVSASRDKTI 125
Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
K+W + C+K+ GH V GT I S D +++W + T C + +H
Sbjct: 126 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 184
Score = 48.2 bits (113), Expect = 1e-06
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 496
K W + +L GH + V R F + +VS D +K+W +T T H
Sbjct: 1 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 497 LKIR 500
++
Sbjct: 60 DSVQ 63
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 90.2 bits (222), Expect = 2e-20
Identities = 39/196 (19%), Positives = 60/196 (30%), Gaps = 53/196 (27%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
L SG+ D + K+W G GHE DIN + PN A+GS D T ++
Sbjct: 198 LFVSGACDASAKLWDVREG-MCRQTF----TGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 347 WSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD 406
+ +
Sbjct: 253 FD------------------------------------------------LRADQELMTY 264
Query: 407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKG 466
+ I G+ V+FS R+L++ D +W L GHD V + G
Sbjct: 265 SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324
Query: 467 TQIVSTGADGLLKLWS 482
+ + D LK+W+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 67.5 bits (163), Expect = 7e-13
Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 19/141 (13%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
VS D KLW ++ C TF H + + F
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGH-----------------ESDINAICFF 235
Query: 422 PLDRILISSSGDATIKL--WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLK 479
P + S DAT +L + S + + F G +++ D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 480 LWSIKTSTCVSTFDKHALKIR 500
+W + H ++
Sbjct: 296 VWDALKADRAGVLAGHDNRVS 316
Score = 67.1 bits (162), Expect = 1e-12
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
LL +G D VW VL GH ++C+ V+ + +A+GS D +K
Sbjct: 283 RLLLAGYDDFNCNVWDALKA-DRAGVLAGHDNR----VSCLGVTDDGMAVATGSWDSFLK 337
Query: 346 VWS 348
+W+
Sbjct: 338 IWN 340
Score = 67.1 bits (162), Expect = 1e-12
Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
A+GS D T +++ ++ I V+ S + +LL +G D
Sbjct: 239 NAFATGSDDATCRLFDLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 346 VWSTTGGLKLLNVLRGHKK----------GTQIVSTGADGLLKLWS 381
VW VL GH G + + D LK+W+
Sbjct: 296 VWDALKA-DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 62.4 bits (150), Expect = 3e-11
Identities = 29/216 (13%), Positives = 65/216 (30%), Gaps = 37/216 (17%)
Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376
+GH I + + +LL S S D + +W + K+ + +
Sbjct: 52 RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111
Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITK------------------------------- 405
+ + + +
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 406 ------DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLR 459
TG V ++ +P R+ +S + DA+ KLW + + +C ++ GH++ +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 460 CHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
F G + D +L+ ++ + T+
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267
Score = 39.7 bits (91), Expect = 6e-04
Identities = 13/64 (20%), Positives = 22/64 (34%)
Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSE 505
++L GH A + H+ +VS DG L +W T+ V + +
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 506 NDHK 509
Sbjct: 107 PSGN 110
Score = 34.7 bits (78), Expect = 0.025
Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 17/109 (15%)
Query: 387 CVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVC 446
T H KI+ + + R+L+S+S D + +W
Sbjct: 47 TRRTLRGHLAKIYAMH-----------------WGTDSRLLVSASQDGKLIIWDSYTTNK 89
Query: 447 LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+ ++ + V+ C + G + G D + ++++KT +
Sbjct: 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 89.9 bits (221), Expect = 6e-20
Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 46/205 (22%)
Query: 288 LASGSLDKTVKVWSTTGG--LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+A+GSLD+ V+VW + G ++ L+ GH+ + V + + + + SGSLD++VK
Sbjct: 220 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 279
Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
+W+ + + + TC T+ H
Sbjct: 280 LWNLQNA---------------------NNKSDSKTPNSGTCEVTYIGH----------- 307
Query: 406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN- 464
V V + D ++S S D + W L L+GH SV+ N
Sbjct: 308 ------KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 361
Query: 465 -----KGTQIVSTGADGLLKLWSIK 484
+ + D ++W K
Sbjct: 362 SSLGPEYNVFATGSGDCKARIWKYK 386
Score = 64.8 bits (156), Expect = 8e-12
Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 22/175 (12%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
G I + D +++W +T V D + V+ V F+
Sbjct: 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE----------NESGTGHKDSVYSVVFT 263
Query: 422 PLDRILISSSGDATIKLWCLTD------------YVCLKSLEGHDASVLRCHFINKGTQI 469
+ ++S S D ++KLW L + C + GH VL I
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 323
Query: 470 VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDC 524
+S D + W K+ + H + + N + + DC
Sbjct: 324 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 378
Score = 62.9 bits (151), Expect = 3e-11
Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 42/233 (18%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
+ +++ + ++V H + CV S + + LA+G +KT +V+
Sbjct: 31 ALKKQTNDYYILYNPALP-REIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVY 88
Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407
+ G L+ L + S+ L I ++ + D
Sbjct: 89 RVSDG-SLVARLSDDSAANKDPEN--------------LNTSSSPSSDLYIRSVCFSPDG 133
Query: 408 NQIITGGVWFVNFSPL-------------------------DRILISSSGDATIKLWCLT 442
+ TG + L+S SGD T+++W L
Sbjct: 134 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 193
Query: 443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
C +L D G I + D +++W +T V D
Sbjct: 194 TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246
Score = 59.4 bits (142), Expect = 4e-10
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--HEKDINCVTVSPNDKLLASGSLDKT 343
E + SGS D+ V W G L +L+GH+ N ++ P + A+GS D
Sbjct: 321 EYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 379
Query: 344 VKVWS 348
++W
Sbjct: 380 ARIWK 384
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 74.9 bits (182), Expect = 3e-15
Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 38/225 (16%)
Query: 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVL 359
W G LK VL KGH+ + + + SGS D T+KVWS G K L L
Sbjct: 1 WRR-GELKSPKVL----KGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTG-KCLRTL 53
Query: 360 RGHKKGTQIVS-----------------------------TGADGLLKLWSIKTSTCVST 390
GH G G ++ + VS
Sbjct: 54 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL 450
L++W + + + ++ R ++S + D +K+W CL +L
Sbjct: 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 173
Query: 451 EGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+GH V F G +VS D +++W ++T C+ T H
Sbjct: 174 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 216
Score = 65.6 bits (158), Expect = 3e-12
Identities = 50/211 (23%), Positives = 76/211 (36%), Gaps = 41/211 (19%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
+ SG+ D VKVW L+ L+GH ++ + + SGSLD +++VW
Sbjct: 150 VVSGAYDFMVKVWDPETE-TCLHTLQGH------TNRVYSLQFDGIHVVSGSLDTSIRVW 202
Query: 348 STTGGLKLLNVLRGHK--------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399
G ++ L GH+ K +VS AD +K+W IKT C+ T
Sbjct: 203 DVETG-NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 261
Query: 400 TLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSL-----EGHD 454
+I+SS D T+KLW L +++L G
Sbjct: 262 ----------------AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 305
Query: 455 ASVLRCHFINKGTQIVSTGADGL----LKLW 481
V R N +G L +
Sbjct: 306 GVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 63.3 bits (152), Expect = 2e-11
Identities = 33/167 (19%), Positives = 57/167 (34%), Gaps = 33/167 (19%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
+ SGSLD +++VW + + D +L SG+ D TVK+
Sbjct: 189 HVVSGSLDTSIRVWD-------VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 241
Query: 347 WSTTGGLKLLNVLRGHK----------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHAL 396
W G L + +K ++++ DG +KLW +KT +
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL-- 299
Query: 397 KIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDAT----IKLW 439
E+ G VW + S + S + T + +
Sbjct: 300 ----------ESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 59.4 bits (142), Expect = 3e-10
Identities = 47/214 (21%), Positives = 81/214 (37%), Gaps = 36/214 (16%)
Query: 291 GSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTT 350
GS D T++VW G + V + + + SG+ D VKVW
Sbjct: 113 GSRDATLRVWDIETG-------QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 165
Query: 351 GGLKLLNVLRGHKK--------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA 402
L+ L+GH G +VS D +++W ++T C+ T H
Sbjct: 166 TE-TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH-------- 216
Query: 403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHF 462
D IL+S + D+T+K+W + CL++L+G +
Sbjct: 217 -----------QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 265
Query: 463 IN-KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+ ++++ DG +KLW +KT +
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299
Score = 53.3 bits (126), Expect = 3e-08
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Query: 439 WCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALK 498
W + K L+GHD V+ C G +IVS D LK+WS T C+ T H
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 499 IRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530
+ +S ++ G + +
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIH 91
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 68.3 bits (165), Expect = 2e-13
Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 38/223 (17%)
Query: 305 GLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK 364
G L + K + C+ +D+ + SG D T+K+W + +L GH
Sbjct: 1 GRHSLQRIHCRS-ETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTL-ECKRILTGHTG 56
Query: 365 G-----------------------------TQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
+ V+ +
Sbjct: 57 SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 116
Query: 396 LKIWTLAITKD---ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
+ +W +A D ++ D+ ++S+SGD TIK+W + +++L G
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 176
Query: 453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
H + + + +VS +D ++LW I+ C+ + H
Sbjct: 177 HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 217
Score = 61.0 bits (146), Expect = 8e-11
Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 43/204 (21%)
Query: 295 KTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK 354
+++ VW + + V +DK + S S D+T+KVW+T+ +
Sbjct: 115 RSIAVWDMASP----TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTC-E 169
Query: 355 LLNVLRGHK--------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKD 406
+ L GHK + +VS +D ++LW I+ C+ + H
Sbjct: 170 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH------------ 217
Query: 407 ENQIITGGVWFVNFSPLDRILISSSGDATIKLWCL---------TDYVCLKSLEGHDASV 457
++ ++S + D IK+W L +CL++L H V
Sbjct: 218 -------EELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 270
Query: 458 LRCHFINKGTQIVSTGADGLLKLW 481
R F QIVS+ D + +W
Sbjct: 271 FRLQF--DEFQIVSSSHDDTILIW 292
Score = 58.3 bits (139), Expect = 5e-10
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349
S S D+T+KVW+T+ + + L GHK+G + D+L+ SGS D T+++W
Sbjct: 153 SASGDRTIKVWNTSTC-EFVRTLNGHKRG------IACLQYRDRLVVSGSSDNTIRLWDI 205
Query: 350 TGGLKL-------LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLA 402
G L V +IVS DG +K+W + + + TL
Sbjct: 206 ECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLC-LRTL- 263
Query: 403 ITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
+G V+ + F ++SSS D TI +W
Sbjct: 264 ------VEHSGRVFRLQFDE--FQIVSSSHDDTILIW 292
Score = 49.8 bits (117), Expect = 3e-07
Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHK----KGHEKDINCVTVSPNDKLLASGSLDKT 343
+ SG+ D +KVW L H + + ++ + S S D T
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL--QFDEFQIVSSSHDDT 288
Query: 344 VKVW 347
+ +W
Sbjct: 289 ILIW 292
Score = 48.3 bits (113), Expect = 9e-07
Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 23/110 (20%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
L+ SGS D T+++W + + + + ++K + SG+ D +KV
Sbjct: 190 LVVSGSSDNTIRLWD-------IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 242
Query: 347 WSTTGGL--------KLLNVLRGHKK--------GTQIVSTGADGLLKLW 380
W L L L H QIVS+ D + +W
Sbjct: 243 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292
Score = 26.3 bits (56), Expect = 9.3
Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 4/51 (7%)
Query: 5 VTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFH 55
V C + V RD + WD ++ + R + C +
Sbjct: 18 VYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 67.2 bits (162), Expect = 1e-12
Identities = 30/243 (12%), Positives = 66/243 (27%), Gaps = 25/243 (10%)
Query: 286 ELLASGSLDKTVKVWST-TGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV 344
+A + V ++ ++ L+ H + V +P+ + + D+
Sbjct: 20 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ----VTGVDWAPDSNRIVTCGTDRNA 75
Query: 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
VW+ G ++ A K S +S W +
Sbjct: 76 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW--VC 133
Query: 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLW------------------CLTDYVC 446
K + I V +++ P +L + S D +++ +
Sbjct: 134 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 193
Query: 447 LKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSEN 506
+ V F G+++ D + L V+T L +
Sbjct: 194 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT 253
Query: 507 DHK 509
+
Sbjct: 254 ESS 256
Score = 59.5 bits (142), Expect = 3e-10
Identities = 19/184 (10%), Positives = 48/184 (26%), Gaps = 22/184 (11%)
Query: 323 INCVTVSPNDKLLASGSLDKTVKVWST-TGGLKLLNVLRGHKK----------GTQIVST 371
I+C + + +A + V ++ ++ L+ H +IV+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 372 GADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSS 431
G D +W++K T T + + N+ + +
Sbjct: 70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129
Query: 432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVST 491
+ ++VL + + + D +++S
Sbjct: 130 WWVCKHIKK-----------PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 178
Query: 492 FDKH 495
Sbjct: 179 PAPT 182
Score = 50.2 bits (118), Expect = 3e-07
Identities = 34/223 (15%), Positives = 64/223 (28%), Gaps = 18/223 (8%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
+ + D+ VW+ + CV +PN+K A GS + + +
Sbjct: 65 RIVTCGTDRNAYVWTLK---GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 347 WSTTGGLKLLNVLRGHKKGTQIVST-------------GADGLLKLWSIKTSTCVSTFDK 393
K V + D +++S
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 181
Query: 394 HALKIWT-LAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
E+ G V V FS + S D+T+ L + + +L
Sbjct: 182 TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 241
Query: 453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+L FI + +V+ G D L++ ++ +F
Sbjct: 242 ETLPLLAVTFITES-SLVAAGHDCFPVLFTYDSAAGKLSFGGR 283
Score = 45.6 bits (106), Expect = 1e-05
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 16/86 (18%)
Query: 281 TGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK----LLA 336
G +LDK + L+ H+ ++ ++V K
Sbjct: 292 QRGLTARERFQNLDKKASSEGSAAAGAGLD------SLHKNSVSQISVLSGGKAKCSQFC 345
Query: 337 SGSLDKTVKVW------STTGGLKLL 356
+ +D + +W S LK++
Sbjct: 346 TTGMDGGMSIWDVRSLESALKDLKIV 371
Score = 44.8 bits (104), Expect = 2e-05
Identities = 35/218 (16%), Positives = 64/218 (29%), Gaps = 41/218 (18%)
Query: 292 SLDKTVKVWSTTGGLKL-------------LNVLRGHKKGHEKDINCVTVSPNDKLLASG 338
S D +++S L ++ V S N +A
Sbjct: 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 339 SLDKTVKVWSTTGGLKLLNVLRGHKKGT--------QIVSTGADGLLKLWSIKTSTCVST 390
S D TV + + + + +V+ G D L++ ++ +
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279
Query: 391 FDKHALKIWTLAITKDENQIITGGVWFVNFSPLDR-ILISSSGDATIKLWCL-TDYV-CL 447
F + + G F LD+ S A L L + V +
Sbjct: 280 FGGR--------LDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQI 331
Query: 448 KSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKT 485
L G A +Q +TG DG + +W +++
Sbjct: 332 SVLSGGKAKC---------SQFCTTGMDGGMSIWDVRS 360
Score = 38.7 bits (88), Expect = 0.001
Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 20/112 (17%)
Query: 286 ELLASGSLDKT-VKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTV 344
L+A+G + + + G G + +LDK
Sbjct: 256 SLVAAGHDCFPVLFTYDSAAGKLSF-------GGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 345 KVWSTTGGLKLLNVL------------RGHKKGTQIVSTGADGLLKLWSIKT 384
+ L+ L G K +Q +TG DG + +W +++
Sbjct: 309 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360
Score = 31.4 bits (69), Expect = 0.27
Identities = 7/40 (17%), Positives = 15/40 (37%), Gaps = 8/40 (20%)
Query: 278 AFYTGGT--VELLASGSLDKTVKVW------STTGGLKLL 309
+ +GG + +D + +W S LK++
Sbjct: 332 SVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKIV 371
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 66.8 bits (161), Expect = 1e-12
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 6/63 (9%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+ S D + W T G + + + +S +DK + +GS DK
Sbjct: 278 KWFVSTGKDNLLNAWRTPYGASI------FQSKESSSVLSCDISVDDKYIVTGSGDKKAT 331
Query: 346 VWS 348
V+
Sbjct: 332 VYE 334
Score = 61.0 bits (146), Expect = 9e-11
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGAD 475
+ F+ + +S+ D + W + +SVL C IV+ D
Sbjct: 269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGD 327
Query: 476 GLLKLWSI 483
++ +
Sbjct: 328 KKATVYEV 335
Score = 60.2 bits (144), Expect = 2e-10
Identities = 30/246 (12%), Positives = 60/246 (24%), Gaps = 37/246 (15%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+ +G VKVW + V + + I + P+ L G T+
Sbjct: 64 RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122
Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTS-------------------- 385
+W + + +S +
Sbjct: 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182
Query: 386 ---------------TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISS 430
D + + T ++ + + P L
Sbjct: 183 TDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG 242
Query: 431 SGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVS 490
+ +++ + + H++ VL F G VSTG D LL W +
Sbjct: 243 MESSNVEVLHVNKPDKYQL-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301
Query: 491 TFDKHA 496
+ +
Sbjct: 302 QSKESS 307
Score = 55.6 bits (132), Expect = 6e-09
Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL--------LNVLRGHKKGT 366
HE + + + K S D + W T G + +
Sbjct: 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 319
Query: 367 QIVSTGADGLLKLWSI 382
IV+ D ++ +
Sbjct: 320 YIVTGSGDKKATVYEV 335
Score = 54.4 bits (129), Expect = 1e-08
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 18/78 (23%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
G VSTG D LL W + + V + S
Sbjct: 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES------------------SSVLSCDIS 315
Query: 422 PLDRILISSSGDATIKLW 439
D+ +++ SGD ++
Sbjct: 316 VDDKYIVTGSGDKKATVY 333
Score = 49.4 bits (116), Expect = 5e-07
Identities = 16/127 (12%), Positives = 31/127 (24%), Gaps = 35/127 (27%)
Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST 349
D + ++ + H + + VT+S + + +G VKVW
Sbjct: 27 PFPPDALIGPGIPRHARQI------NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79
Query: 350 TGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
+ K+ I + + D
Sbjct: 80 SHP----------------------------GNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111
Query: 410 IITGGVW 416
+I GG
Sbjct: 112 LIVGGEA 118
Score = 44.8 bits (104), Expect = 2e-05
Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 15/112 (13%)
Query: 371 TGADGLLKLWSI-KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILIS 429
ADG ++ + +HA +I TL V V S +
Sbjct: 17 VTADGQMQPVPFPPDALIGPGIPRHARQINTLNHG--------EVVCAVTISN-PTRHVY 67
Query: 430 SSGDATIKLWCLTDYVCLKSLE-----GHDASVLRCHFINKGTQIVSTGADG 476
+ G +K+W ++ + D + C + G ++ G
Sbjct: 68 TGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
Score = 36.7 bits (83), Expect = 0.006
Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 428 ISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTST 487
+ DA I + +L H V N + V TG G +K+W I
Sbjct: 26 VPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPT-RHVYTGGKGCVKVWDISHPG 83
Query: 488 CVSTF 492
S
Sbjct: 84 NKSPV 88
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 66.8 bits (161), Expect = 2e-12
Identities = 35/248 (14%), Positives = 65/248 (26%), Gaps = 45/248 (18%)
Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLN------------------- 357
K H+ DI V+ + S S D +KVW
Sbjct: 11 KAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68
Query: 358 ---VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG 414
+ R + + +T G L + I L + + K +
Sbjct: 69 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK-- 126
Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDY------------------VCLKSLEGHDAS 456
N L L+++ T +W + ++S
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186
Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQ 516
+G I + +G +++ + T + F+ I NS+S K
Sbjct: 187 ATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 245
Query: 517 LCSRNSDC 524
L +
Sbjct: 246 LAIAHDSN 253
Score = 66.0 bits (159), Expect = 3e-12
Identities = 35/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)
Query: 268 GIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG-----LKLLNVLRGHKKGHEKD 322
G+ + + L+A+ S + + T + + +
Sbjct: 62 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS 121
Query: 323 INCVTVSPND-----KLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLL 377
+ ++ L + + T +W N L + T + + +
Sbjct: 122 FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 181
Query: 378 KLWSIKTSTCVST---------------FDKHALKIWTLAITKDENQIITGGVWFVNFSP 422
TS +S + L+ ++ + + V FSP
Sbjct: 182 TPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 241
Query: 423 LDRILISSSGDATIKLWCLTDY----------------VCLKSLEGHDASVLRCHFINKG 466
+L + + L + H + V+ F + G
Sbjct: 242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 301
Query: 467 TQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+ S G DG L+ W +KT ++T + H
Sbjct: 302 ETLCSAGWDGKLRFWDVKTKERITTLNMH 330
Score = 64.9 bits (156), Expect = 8e-12
Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 34/211 (16%)
Query: 287 LLASGSLDKTVKVWST-TGGLKLLNVLRGHKKGHEKDINCVTV-------SPNDKLLASG 338
S S D +KVW + H+ ++ V V + L+A+
Sbjct: 26 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 85
Query: 339 SLDKTVKVWSTTGGLKL-------LNVLRGHKKGTQI-----------------VSTGAD 374
S + + T + L++L K V+T
Sbjct: 86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 145
Query: 375 GLLKLWSI-KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGD 433
G +W + ++ + L T + + V+ S ++ + +
Sbjct: 146 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNN 204
Query: 434 ATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
T+++ L+ L + E + + + I
Sbjct: 205 GTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Score = 59.9 bits (143), Expect = 3e-10
Identities = 27/235 (11%), Positives = 65/235 (27%), Gaps = 34/235 (14%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHK-------------KGHEKDINCVTVSPNDKL 334
L + + T +W N L + + V +S L
Sbjct: 139 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGL 197
Query: 335 LASGSLDKTVKVW---------------STTGGLKLLNVLRGHKKGTQIVSTGADGLLKL 379
+A+G + TV++ S + ++ +G+ +
Sbjct: 198 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGC 257
Query: 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
++ + ++ + + E + V ++F+ L S+ D ++ W
Sbjct: 258 ITLYETEFGERIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDGKLRFW 316
Query: 440 CLTDYVCLKSLEGHDASVLRCH----FINKGTQIVSTGADGLLKLWSIKTSTCVS 490
+ + +L H + G + G + L S +
Sbjct: 317 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 371
Score = 50.2 bits (118), Expect = 4e-07
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 7/92 (7%)
Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
S D ++ W + + L H E + + + V + LA V+
Sbjct: 305 CSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG------VFD 357
Query: 349 TTGGLKLLNVLRGHKKGTQIVSTGADGLLKLW 380
K G + D ++ +
Sbjct: 358 VKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 65.3 bits (157), Expect = 5e-12
Identities = 7/185 (3%), Positives = 27/185 (14%), Gaps = 10/185 (5%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKL------LNVLRGHKKGTQI 368
+ K L S V+
Sbjct: 173 AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 232
Query: 369 VSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILI 428
+ + +
Sbjct: 233 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292
Query: 429 SSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488
+ + + + + + ++ ++ DG + + ++
Sbjct: 293 GAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
Query: 489 VSTFD 493
T +
Sbjct: 349 ERTVE 353
Score = 58.0 bits (138), Expect = 9e-10
Identities = 15/158 (9%), Positives = 33/158 (20%), Gaps = 13/158 (8%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--GHEKDINCVTVSPNDKLLASGSLDKTV 344
L S V+ N + P +G D
Sbjct: 192 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLND 251
Query: 345 K---VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTL 401
++ + I S G + +K L + +
Sbjct: 252 MYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY------YQGAPEKGVLLKYDV 305
Query: 402 AITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
+ + + + S + ++ D I +
Sbjct: 306 K--TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Score = 54.9 bits (130), Expect = 1e-08
Identities = 4/75 (5%), Positives = 15/75 (20%), Gaps = 9/75 (12%)
Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
G + + + ++ + +S + K +
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDVKTR---------KVTEVKNNLTDLRLSADRKTVMV 331
Query: 338 GSLDKTVKVWSTTGG 352
D + +
Sbjct: 332 RKDDGKIYTFPLEKP 346
Score = 37.5 bits (85), Expect = 0.003
Identities = 15/118 (12%), Positives = 27/118 (22%), Gaps = 4/118 (3%)
Query: 415 VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGA 474
+ +FSPLD LI+ + ++ LK + G
Sbjct: 5 KFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGT 62
Query: 475 DG--LLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530
L ++ +T + N + D E
Sbjct: 63 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT 120
Score = 32.1 bits (71), Expect = 0.16
Identities = 20/218 (9%), Positives = 46/218 (21%), Gaps = 50/218 (22%)
Query: 328 VSPND-KLLASGSLDKTVKVWSTTGGLKLLNVLRGHK--------KGTQIVSTGADG--L 376
SP D L+A S + + +G +L V + G
Sbjct: 10 FSPLDGDLIAFVSRGQ-AFIQDVSGT-YVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDF 67
Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ--------------------------- 409
L ++ +T F+++ ++ + + ++
Sbjct: 68 LGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126
Query: 410 --------IITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCH 461
I + PL I ++ + + ++
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPA 185
Query: 462 FINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKI 499
F + L I
Sbjct: 186 FDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 63.8 bits (153), Expect = 1e-11
Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 317 KGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGL 376
+GH + + D + +G+ DK ++V+ + K L L GH G + G+
Sbjct: 9 RGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINK-KFLLQLSGHDGGVWALKYAHGGI 66
Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436
L S + E T + + +++ S D T+
Sbjct: 67 L------VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120
Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
+W L + L H + V
Sbjct: 121 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 156
Score = 58.0 bits (138), Expect = 9e-10
Identities = 37/259 (14%), Positives = 82/259 (31%), Gaps = 19/259 (7%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+ +G+ DK ++V+ + K L L GH G + + + L++ +
Sbjct: 24 NYVITGADDKMIRVYDSINK-KFLLQLSGHDGG----VWALKYAHGGILVSGSTDRTVRV 78
Query: 346 VWSTTGGL----------KLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 395
G + +K IV+ D L +W + + V +
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138
Query: 396 LKIWTLAITKDENQIITGGVWFVN----FSPLDRILISSSGDATIKLWCLTDYVCLKSLE 451
++ + + S I++S S D T+ +W + CL L
Sbjct: 139 DYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 198
Query: 452 GHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGF 511
GH + + ++ + +S D +++W ++ + T H + +
Sbjct: 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS 258
Query: 512 GLPRQLCSRNSDCEYRGGW 530
+Y +
Sbjct: 259 AAADGSIRGWDANDYSRKF 277
Score = 56.1 bits (133), Expect = 4e-09
Identities = 19/183 (10%), Positives = 46/183 (25%), Gaps = 27/183 (14%)
Query: 358 VLRGHKK---------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDEN 408
LRGH +++ D +++++ + H
Sbjct: 7 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGH-------------- 52
Query: 409 QIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQ 468
GGVW + ++ ++ S+ + K +
Sbjct: 53 ---DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK 109
Query: 469 I-VSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYR 527
V+ D L +W + + V + + ++ F + +
Sbjct: 110 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 169
Query: 528 GGW 530
G
Sbjct: 170 HGN 172
Score = 52.2 bits (123), Expect = 6e-08
Identities = 11/108 (10%), Positives = 32/108 (29%), Gaps = 2/108 (1%)
Query: 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
+ VS +++ W + + + + ++ S + ++
Sbjct: 249 LRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIY 308
Query: 440 CLTDYVCLKS-LEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS 486
L + + + + +F T + + DG L + S
Sbjct: 309 NLRSGKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEILDFS 355
Score = 49.5 bits (116), Expect = 5e-07
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
+L SGS + +++ G ++ + I V L+A+ D +
Sbjct: 296 ILVSGS-ENQFNIYNLRSG----KLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFL 349
Query: 347 W 347
Sbjct: 350 E 350
Score = 46.4 bits (108), Expect = 5e-06
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 10/80 (12%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--------- 365
H T +D +L SGS + +++ G + +
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK 335
Query: 366 TQIVSTGADGLLKLWSIKTS 385
T + + DG L + S
Sbjct: 336 TLVAAVEKDGQSFLEILDFS 355
Score = 46.4 bits (108), Expect = 5e-06
Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 19/76 (25%)
Query: 365 GTQIVSTGADGLLKLWSIKTSTCV-STFDKHALKIWTLAITKDENQIITGGVWFVNFSPL 423
I+ +G++ ++++++ V + K +W VNF
Sbjct: 293 SDNILVSGSENQFNIYNLRSGKLVHANILKD-----------------ADQIWSVNFKG- 334
Query: 424 DRILISSSGDATIKLW 439
++ + D L
Sbjct: 335 KTLVAAVEKDGQSFLE 350
Score = 34.5 bits (77), Expect = 0.025
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 432 GDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCV-S 490
A + + H ++ I+ +G++ ++++++ V +
Sbjct: 259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA 318
Query: 491 TFDKHALKIR 500
K A +I
Sbjct: 319 NILKDADQIW 328
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 59.2 bits (141), Expect = 3e-10
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 4/93 (4%)
Query: 307 KLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGT 366
+ V GH K I ++ S + K L S + + W + G+ H
Sbjct: 3 SIDQVRYGHNKA----ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 58
Query: 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIW 399
+ T + G L S V +
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSS 91
Score = 52.3 bits (123), Expect = 5e-08
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
A+GSLD +V VW+ +++G H + N+ + S D +K W+
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKG---AHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 49.2 bits (115), Expect = 5e-07
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 416 WFVNFSPLDRILISSSGDATIKLWCLTDY--VCLKSLEGHDASVLRCHFINKGTQIVSTG 473
V++SP + L + S D ++ +W + + H S + T IVS G
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287
Query: 474 ADGLLKLWSI 483
D +K W++
Sbjct: 288 QDSNIKFWNV 297
Score = 48.4 bits (113), Expect = 8e-07
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+ GH+ ++ G + S A+G + W I T F
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 53
Score = 48.1 bits (112), Expect = 1e-06
Identities = 12/119 (10%), Positives = 30/119 (25%), Gaps = 4/119 (3%)
Query: 412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVS 471
+ ++ S + L S+ + I W ++ + + A+++ + +
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 472 TGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRNSDCEYRGGW 530
D LK+ S D S+ +
Sbjct: 72 VSWDDHLKVVPAGGSGV----DSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126
Score = 42.7 bits (98), Expect = 6e-05
Identities = 9/81 (11%), Positives = 23/81 (28%), Gaps = 15/81 (18%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
++ + D + +W++ + K A
Sbjct: 233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA---------------HAMSSVNSVIW 277
Query: 422 PLDRILISSSGDATIKLWCLT 442
+ ++S+ D+ IK W +
Sbjct: 278 LNETTIVSAGQDSNIKFWNVP 298
Score = 42.7 bits (98), Expect = 7e-05
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 11/79 (13%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWST-TGGLKLLNVLRGHKK--------- 364
H + CV+ SP++ LA+GSLD +V VW+ + + H
Sbjct: 219 SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 278
Query: 365 -GTQIVSTGADGLLKLWSI 382
T IVS G D +K W++
Sbjct: 279 NETTIVSAGQDSNIKFWNV 297
Score = 38.8 bits (88), Expect = 0.001
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 4/69 (5%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+ L S + + W + G V H I + + L D
Sbjct: 25 KTLFSADAEGHINSWDISTG-ISNRVFP---DVHATMITGIKTTSKGDLFTVSWDDHLKV 80
Query: 346 VWSTTGGLK 354
V + G+
Sbjct: 81 VPAGGSGVD 89
Score = 28.0 bits (60), Expect = 2.6
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 286 ELLASGSLDKTVKVWS 301
+ S D +K W+
Sbjct: 281 TTIVSAGQDSNIKFWN 296
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 59.2 bits (141), Expect = 3e-10
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWS 348
A+GSLD + ++S +K++ L HK G +N + L S D +K W+
Sbjct: 231 ATGSLDTNIFIYSVKRPMKIIKALNAHKDG----VNNLLWETPST-LVSSGADACIKRWN 285
Score = 54.6 bits (129), Expect = 9e-09
Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 2/105 (1%)
Query: 380 WSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLW 439
+ + + + + + ++ + S D I ++
Sbjct: 183 MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242
Query: 440 CL-TDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSI 483
+ +K+L H V + T +VS+GAD +K W++
Sbjct: 243 SVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 51.9 bits (122), Expect = 7e-08
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKG--------- 365
+ + L+A+GSLD + ++S +K++ L HK G
Sbjct: 210 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP 269
Query: 366 TQIVSTGADGLLKLWSI 382
+ +VS+GAD +K W++
Sbjct: 270 STLVSSGADACIKRWNV 286
Score = 49.2 bits (115), Expect = 4e-07
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 304 GGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLK 354
G ++L + GH KG I +TV+P L SGS D + WS++ +
Sbjct: 1 GHDEVLKTISGHNKG----ITALTVNP----LISGSYDGRIMEWSSSSMHQ 43
Score = 45.3 bits (105), Expect = 9e-06
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 19/79 (24%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTS-TCVSTFDKHALKIWTLAITKDENQIITGGVWFVNF 420
+ + + D + ++S+K + + H GV + +
Sbjct: 224 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH-----------------KDGVNNLLW 266
Query: 421 SPLDRILISSSGDATIKLW 439
L+SS DA IK W
Sbjct: 267 ET-PSTLVSSGADACIKRW 284
Score = 39.6 bits (90), Expect = 6e-04
Identities = 30/258 (11%), Positives = 64/258 (24%), Gaps = 46/258 (17%)
Query: 288 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVW 347
L SGS D + WS++ + H I + S + + D
Sbjct: 24 LISGSYDGRIMEWSSSSMH----------QDHSNLIVSLDNSKAQEYSSISWDDTLKVNG 73
Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCV------------------- 388
T + D L + T +
Sbjct: 74 ITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV 133
Query: 389 -----STFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTD 443
K+ L ++ D + +++ SP + + + I L+ L
Sbjct: 134 AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS 193
Query: 444 -----------YVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTS-TCVST 491
+ ++ A + + + D + ++S+K +
Sbjct: 194 REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 253
Query: 492 FDKHALKIRNSDSENDHK 509
+ H + N E
Sbjct: 254 LNAHKDGVNNLLWETPST 271
Score = 38.0 bits (86), Expect = 0.002
Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 9/56 (16%)
Query: 412 TGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGT 467
G+ + +PL IS S D I W + + H ++
Sbjct: 13 NKGITALTVNPL----ISGSYDGRIMEWSSS-----SMHQDHSNLIVSLDNSKAQE 59
Score = 37.6 bits (85), Expect = 0.002
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Query: 351 GGLKLLNVLRGHKKG------TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
G ++L + GH KG ++S DG + WS + H+ I +L +
Sbjct: 1 GHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNS 55
Query: 405 KDENQIITGGVWFVNF 420
K + +
Sbjct: 56 KAQEYSSISWDDTLKV 71
Score = 36.5 bits (82), Expect = 0.006
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Query: 446 CLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTC 488
LK++ GH+ + ++S DG + WS +
Sbjct: 5 VLKTISGHNKGITALTV----NPLISGSYDGRIMEWSSSSMHQ 43
Score = 27.6 bits (59), Expect = 3.7
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 3/24 (12%)
Query: 278 AFYTGGTVELLASGSLDKTVKVWS 301
+ T T L S D +K W+
Sbjct: 265 LWETPST---LVSSGADACIKRWN 285
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 58.8 bits (140), Expect = 5e-10
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+AS S DKT+K+W+ K+ + + + + + L S S + +
Sbjct: 251 TKIASASADKTIKIWNVATL-KVEKTIPVG---TRIEDQQLGIIWTKQALVSISANGFIN 306
Query: 346 VW 347
Sbjct: 307 FV 308
Score = 53.4 bits (126), Expect = 3e-08
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 399 WTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGH-DASV 457
+N +G V+ + +SP + S+S D TIK+W + K++
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 284
Query: 458 LRCHFINKGTQIVSTGADGLLKLW 481
+ I +VS A+G +
Sbjct: 285 QQLGIIWTKQALVSISANGFINFV 308
Score = 50.3 bits (118), Expect = 3e-07
Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 16/78 (20%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
GT+I S AD +K+W++ T T +
Sbjct: 247 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGT----------------RIEDQQLGII 290
Query: 422 PLDRILISSSGDATIKLW 439
+ L+S S + I
Sbjct: 291 WTKQALVSISANGFINFV 308
Score = 50.3 bits (118), Expect = 3e-07
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
Query: 319 HEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK-----------GTQ 367
H + +T SP+ +AS S DKT+K+W+ K+ + +
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKTIPVGTRIEDQQLGIIWTKQA 295
Query: 368 IVSTGADGLLKLW 380
+VS A+G +
Sbjct: 296 LVSISANGFINFV 308
Score = 45.7 bits (106), Expect = 8e-06
Identities = 9/62 (14%), Positives = 18/62 (29%), Gaps = 6/62 (9%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
+ + + +V + H SP+ ASG + V+
Sbjct: 30 DKIQYCN-GTSVYTVPVGSL-TDTEIYTEHSHQ----TTVAKTSPSGYYCASGDVHGNVR 83
Query: 346 VW 347
+W
Sbjct: 84 IW 85
Score = 43.0 bits (99), Expect = 5e-05
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 413 GGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVST 472
G + +P + +G ++ + + H G S
Sbjct: 18 GTAVVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG 76
Query: 473 GADGLLKLWSIKTSTC 488
G +++W +T
Sbjct: 77 DVHGNVRIWDTTQTTH 92
Score = 41.8 bits (96), Expect = 1e-04
Identities = 11/89 (12%), Positives = 21/89 (23%), Gaps = 18/89 (20%)
Query: 358 VLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWF 417
VL G +I + + + T + +H +
Sbjct: 22 VLGNTPAGDKIQY-CNGTSVYTVPVGSLTDTEIYTEH-----------------SHQTTV 63
Query: 418 VNFSPLDRILISSSGDATIKLWCLTDYVC 446
SP S +++W T
Sbjct: 64 AKTSPSGYYCASGDVHGNVRIWDTTQTTH 92
Score = 41.4 bits (95), Expect = 2e-04
Identities = 28/211 (13%), Positives = 56/211 (26%), Gaps = 5/211 (2%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLL--ASGSLDKTV 344
ASG + V++W TT ++L+ + ++ K + ++
Sbjct: 72 YCASGDVHGNVRIWDTTQTT---HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 128
Query: 345 KVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAIT 404
V+ G N+ + + + + +T T
Sbjct: 129 HVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 188
Query: 405 KDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
+ F+ + H SV +
Sbjct: 189 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 248
Query: 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
GT+I S AD +K+W++ T T
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVG 279
Score = 35.3 bits (79), Expect = 0.014
Identities = 10/86 (11%), Positives = 21/86 (24%), Gaps = 15/86 (17%)
Query: 312 LRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKK------- 364
L +G + +P + + +V + H
Sbjct: 12 LPRTARGT---AVVLGNTPAGDKIQYCN-GTSVYTVPVGSL-TDTEIYTEHSHQTTVAKT 66
Query: 365 ---GTQIVSTGADGLLKLWSIKTSTC 387
G S G +++W +T
Sbjct: 67 SPSGYYCASGDVHGNVRIWDTTQTTH 92
Score = 26.8 bits (57), Expect = 7.0
Identities = 6/34 (17%), Positives = 15/34 (44%)
Query: 20 VHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAV 53
DK + W++++ K ++ P +E +
Sbjct: 254 ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 287
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 57.6 bits (137), Expect = 1e-09
Identities = 21/134 (15%), Positives = 39/134 (29%), Gaps = 22/134 (16%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------KGHEKDINCVTVSPNDKLL 335
E A S+D V V N + +N + SP K L
Sbjct: 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL 266
Query: 336 ASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GTQIVSTGADGLLKLWSIKTSTC 387
+ D + W+ K+ N + ++ + +D K +
Sbjct: 267 YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA----I 322
Query: 388 VSTFDKHALKIWTL 401
T + +A I+ +
Sbjct: 323 DQTIELNASSIYII 336
Score = 54.9 bits (130), Expect = 8e-09
Identities = 15/193 (7%), Positives = 50/193 (25%), Gaps = 7/193 (3%)
Query: 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR--GHK 363
++++ + + K I+ + + P+ LL S D ++ V+ K +++L+ +K
Sbjct: 1 MQIVQIEQAPKDY----ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK 56
Query: 364 KG-TQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSP 422
L + + L + I + +
Sbjct: 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLI 116
Query: 423 LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWS 482
V + ++++ + ++ +
Sbjct: 117 AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFR 176
Query: 483 IKTSTCVSTFDKH 495
+ + +
Sbjct: 177 LPLCEDDNGTIEE 189
Score = 52.9 bits (125), Expect = 3e-08
Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 7/138 (5%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
K+ + DG + + K KD N V + FS
Sbjct: 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA--YPVNSIEFS 260
Query: 422 PLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLW 481
P + L ++ D I W L +K+ + + + +D K
Sbjct: 261 PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVK-IACSDNILCLATSDDTFKTN 319
Query: 482 SIKTSTCVSTFDKHALKI 499
+ T + +A I
Sbjct: 320 AA----IDQTIELNASSI 333
Score = 51.8 bits (122), Expect = 9e-08
Identities = 26/250 (10%), Positives = 56/250 (22%), Gaps = 7/250 (2%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK 345
LL S D ++ V+ K +++L ++ + C N L +
Sbjct: 24 SLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81
Query: 346 VWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITK 405
+ G L ++ I G KL + + D +A+
Sbjct: 82 LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKN 141
Query: 406 DENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDA----SVLRCH 461
+ LI ++ ++ + L
Sbjct: 142 LNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201
Query: 462 FINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRNSDSENDHKGFGLPRQLCSRN 521
+ + DG + + K R P +
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF-AFRCHRLNLKDTNLAYPVNSIEFS 260
Query: 522 SDCEYRGGWS 531
++
Sbjct: 261 PRHKFLYTAG 270
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 56.5 bits (134), Expect = 3e-09
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPN-DKLLASGSLDKTV 344
+ A+ D T++VW T K + + V V + + S SLD T+
Sbjct: 264 QKFATVGADATIRVWDVTTS-KCVQKWTLD--KQQLGNQQVGVVATGNGRIISLSLDGTL 320
Query: 345 KVW 347
+
Sbjct: 321 NFY 323
Score = 52.6 bits (124), Expect = 5e-08
Identities = 26/229 (11%), Positives = 61/229 (26%), Gaps = 5/229 (2%)
Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGL---KLLNVLRGHKKGHEKDINCVTVSPNDKL 334
F + L SG V VW T + ++ + I+ ++ +
Sbjct: 70 KFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRR 129
Query: 335 LASGSL--DKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFD 392
L D S G L V ++ + + + + V
Sbjct: 130 LCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 189
Query: 393 KHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEG 452
+ + + + + + S + ++ +
Sbjct: 190 PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE 249
Query: 453 HDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIRN 501
+ + + GAD +++W + TS CV + ++ N
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298
Score = 47.6 bits (111), Expect = 2e-06
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 424 DRILISSSGDATIKLWCLTDYVCLKSLEGHDASV----LRCHFINKGTQIVSTGADGLLK 479
+ + DATI++W +T C++ + + +I+S DG L
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLN 321
Query: 480 LWSI 483
+ +
Sbjct: 322 FYEL 325
Score = 47.6 bits (111), Expect = 2e-06
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 16/79 (20%)
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFS 421
+ + GAD +++W + TS CV + ++ V
Sbjct: 260 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG---------------NQQVGVV 304
Query: 422 PL-DRILISSSGDATIKLW 439
+ +IS S D T+ +
Sbjct: 305 ATGNGRIISLSLDGTLNFY 323
Score = 44.5 bits (103), Expect = 2e-05
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 14/81 (17%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHK----------- 363
+ + + + A+ D T++VW T K + K
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVV 304
Query: 364 --KGTQIVSTGADGLLKLWSI 382
+I+S DG L + +
Sbjct: 305 ATGNGRIISLSLDGTLNFYEL 325
Score = 41.1 bits (94), Expect = 3e-04
Identities = 20/184 (10%), Positives = 46/184 (25%), Gaps = 26/184 (14%)
Query: 306 LKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKT-VKVW-STTGGLKLLNVLRGHK 363
+ L ++ ++ P +A V+ + + GH
Sbjct: 3 ISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG 62
Query: 364 K-------------GTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQI 410
+ S G + +W ++ + + K E Q+
Sbjct: 63 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN---------VKSEFQV 113
Query: 411 ITGGVWFVNFSP--LDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQ 468
+ G + +++ ++ D L + GH + CH
Sbjct: 114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 173
Query: 469 IVST 472
T
Sbjct: 174 RSMT 177
Score = 37.6 bits (85), Expect = 0.003
Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 6/89 (6%)
Query: 413 GGVWFVNFSPLDRILISSSGDAT-IKLWCLTD--YVCLKSLEGHDASVLRC---HFINKG 466
+++ P + G + ++ D + GH +SV+ I
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 467 TQIVSTGADGLLKLWSIKTSTCVSTFDKH 495
+ S G + +W ++ + +
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVN 106
Score = 29.5 bits (64), Expect = 0.94
Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Query: 3 FCVTCFDVIPQITSEFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETES 62
+ + S+ G D + WD+++ K ++ + + +
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV----- 304
Query: 63 KSGGKTFVLAGGEKSLLHYYE 83
+ G +++ L++YE
Sbjct: 305 -ATGNGRIISLSLDGTLNFYE 324
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 55.8 bits (133), Expect = 5e-09
Identities = 17/268 (6%), Positives = 53/268 (19%), Gaps = 24/268 (8%)
Query: 247 SMEPSTLEELEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGG- 305
L L + A + A G V+V+
Sbjct: 50 VSCAGCGVTLGHSLGAFLSL-AVAGHSGSDFALASTSF-ARSAKGKRTDYVEVFDPVTFL 107
Query: 306 -LKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGGLKLLNVLRGHK 363
+ + + + ++ + + LL S G + +
Sbjct: 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGA-SDDQLTKSAS 166
Query: 364 -------KGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVW 416
L + + +
Sbjct: 167 CFHIHPGAAATHYLGSCPASLAASDLAAAP-----------AAAGIVGAQCTGAQNCSSQ 215
Query: 417 FVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADG 476
+ ++ + + +++G+++ +F + G Q+V+ +
Sbjct: 216 AAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275
Query: 477 LLKLWSIKTSTCVSTFDKHALKIRNSDS 504
+ + +
Sbjct: 276 DGIMILTVEHSRSCLAAAENTSSVTASV 303
Score = 44.2 bits (103), Expect = 3e-05
Identities = 14/190 (7%), Positives = 36/190 (18%), Gaps = 12/190 (6%)
Query: 278 AFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLAS 337
+ G V + L+ +
Sbjct: 169 HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA 228
Query: 338 GSLDKTVKVWSTTGGLKLLNV---------LRGHKKGTQIVSTGADGLLKLWSIKTSTCV 388
+ G + G Q+V+ + + +
Sbjct: 229 VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS 288
Query: 389 STFDKHALKIWTLAITKDENQIITGG-VWFVNFSPLDR--ILISSSGDATIKLWCLTDYV 445
T ++ + I G + + +S+G + ++
Sbjct: 289 CLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348
Query: 446 CLKSLEGHDA 455
S+E
Sbjct: 349 DQSSVELDKG 358
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 52.4 bits (124), Expect = 5e-08
Identities = 17/182 (9%), Positives = 40/182 (21%), Gaps = 13/182 (7%)
Query: 326 VTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLR-GHKKGTQIVSTGADGLLKLWSIKT 384
+ + + + + V + K G D
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 385 STCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLTDY 444
+ D K A + ++ SP + + ++
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 445 VCLKSL----EGHDASVLRCHFINKGTQIVSTGADGLL-------KLWSIKTSTCVSTFD 493
+ +G +A +R + + ++ DG L +KT
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP 180
Query: 494 KH 495
Sbjct: 181 LR 182
Score = 47.0 bits (110), Expect = 3e-06
Identities = 26/209 (12%), Positives = 52/209 (24%), Gaps = 12/209 (5%)
Query: 289 ASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVK-VW 347
A G K V+ + + L+ K + L + +
Sbjct: 130 ADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGY 189
Query: 348 STTGGLKLLNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDE 407
S L + + + + + + + L K
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIAR------FKDDKQDPATADLLYGYLSVDLKTGKTH 243
Query: 408 NQIITGG---VWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFIN 464
Q + SP D I + + + L +K+ D + F
Sbjct: 244 TQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFDK 301
Query: 465 KGTQIVSTGADGLLKLWSIKTSTCVSTFD 493
KG ++ G L +++ T V
Sbjct: 302 KGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330
Score = 47.0 bits (110), Expect = 3e-06
Identities = 12/160 (7%), Positives = 29/160 (18%), Gaps = 12/160 (7%)
Query: 299 VWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV 358
+S L + + + A+ L G
Sbjct: 188 GYSAPDVLYFWPHQSPRHEFSMLYT-IARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 246
Query: 359 LRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG-VWF 417
+ + L + L K +
Sbjct: 247 FADLTELYFTGLRSPKDPN----------QIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296
Query: 418 VNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASV 457
V F L + ++ +K+++ +
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 52.1 bits (123), Expect = 7e-08
Identities = 24/199 (12%), Positives = 51/199 (25%), Gaps = 15/199 (7%)
Query: 270 FVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVS 329
+ + + KV T G + E IN S
Sbjct: 144 MLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 203
Query: 330 PNDKLLASGSLDKTVKVWS-TTGGLKLLNVLRGHKKGT----------QIVSTGADG-LL 377
L + + ++G K L + + Q V+ +
Sbjct: 204 QKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 263
Query: 378 KLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGG-VWFVNFSPLDR--ILISSSGDA 434
L + + + + + G + +N S ++ + S+GD
Sbjct: 264 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 323
Query: 435 TIKLWCLTDYVCLKSLEGH 453
T+ + L+S+
Sbjct: 324 TLYIHDAESGEELRSVNQL 342
Score = 50.9 bits (120), Expect = 2e-07
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Query: 276 HGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-- 333
+ + + + V V G +L GH +I+ + VS ++K
Sbjct: 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH------EIDSINVSQDEKPL 314
Query: 334 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG 375
L A + DKT+ + G + L + G Q+++T G
Sbjct: 315 LYALSTGDKTLYIHDAESG-EELRSVNQLGHGPQVITTADMG 355
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 50.8 bits (120), Expect = 2e-07
Identities = 20/262 (7%), Positives = 46/262 (17%), Gaps = 43/262 (16%)
Query: 269 IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKD--INCV 326
+ A + K + V + T + + KK + CV
Sbjct: 61 AGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACV 120
Query: 327 TVSPNDK-LLASGSLD-KTVKVWSTTGGLKLLNVLR--------------GHKKGTQIVS 370
P + K + V G + + + +
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLF 180
Query: 371 TGADGLLKLWSIKTST--CVSTFDKHALKIWTLAITKDENQIITG---GVWFVNFS---- 421
T G ++ + Q +
Sbjct: 181 TTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGT 240
Query: 422 ------PLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQ--IVSTG 473
P ++ + ++ L T
Sbjct: 241 DGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVS-------IQVSEDDKPLFYGLTA 293
Query: 474 ADGLLKLWSIKTSTCVSTFDKH 495
L+ + +T +
Sbjct: 294 TSDLV-VMDARTGALQHVEKQI 314
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 48.6 bits (114), Expect = 9e-07
Identities = 20/220 (9%), Positives = 52/220 (23%), Gaps = 14/220 (6%)
Query: 286 ELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTV 344
+ + + + + V T + V+ G V+P + A+ + +++
Sbjct: 2 DYILAPARPDKLVVIDTEKM-AVDKVITIADAGPT--PMVPMVAPGGRIAYATVNKSESL 58
Query: 345 KVWSTTGGLKL----LNVLRGHKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWT 400
G L L+ K + DG T +
Sbjct: 59 VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118
Query: 401 LAITKDENQI----ITGGVWFVNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDAS 456
L + ++ + + ++ L D + ++
Sbjct: 119 LYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE--AGTLVEDKPIQSWE 176
Query: 457 VLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHA 496
+ + G++ + D A
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216
Score = 46.7 bits (109), Expect = 4e-06
Identities = 19/193 (9%), Positives = 47/193 (24%), Gaps = 17/193 (8%)
Query: 315 HKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNV-------------LRG 361
+ I + + + L D V ++ + L
Sbjct: 129 KAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188
Query: 362 HKKGTQIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITG-GVWFVNF 420
+ I + + L L + + + V++ +
Sbjct: 189 WNQHESSGVMATPFYTARKDIDPADPTAYR--TGLLTMDLETGEMAMREVRIMDVFYFST 246
Query: 421 SPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKL 480
+ + ++ + L +K + S + G+ + GA G L
Sbjct: 247 AVNPAKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAA 305
Query: 481 WSIKTSTCVSTFD 493
+ +T D
Sbjct: 306 YDAETLEKKGQVD 318
Score = 46.3 bits (108), Expect = 5e-06
Identities = 31/357 (8%), Positives = 79/357 (22%), Gaps = 29/357 (8%)
Query: 17 EFSVHCGRDKVLFTWDLSSRKQLRSYPAYESLETCAVFHLSDETESKSGGKTFVLAGGEK 76
++ + R L D + ++ T V ++ G+ +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPG------GRIAYATVNKS 55
Query: 77 SLLHYYETSAVKELYQHGLSSPLVRIVRSSVKRMYAVVTADHNISLYRLNSETGLEERPN 136
L + + L + LS+P VK ++ + +L S LE
Sbjct: 56 ESLVKIDLVTGETLGRIDLSTP-----EERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110
Query: 137 KILKFRKQFVGFSDEILDIALLGEEDSHIVVASNEYLNGGDLSGLVKLGANRSHNEWFDK 196
++ R A ++ + + +
Sbjct: 111 EVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG----------SKLYGLGRDLHVMD 160
Query: 197 TFERILEAKFKQSSSQQKHNTERLGRDELKTVTLLERGKTVKEEDLFPRQSMEP-STLEE 255
L S + + + T +P +
Sbjct: 161 PEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220
Query: 256 LEKRKTYHFPLFGIFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGH 315
L + V + F T + ++ + +
Sbjct: 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASI------K 274
Query: 316 KKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTG 372
+ V VS + + G + + + + + +++
Sbjct: 275 RVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL-EKKGQVDLPGNASMSLASV 330
Score = 39.8 bits (91), Expect = 6e-04
Identities = 20/231 (8%), Positives = 56/231 (24%), Gaps = 25/231 (10%)
Query: 287 LLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKV 346
A+ + +++ G L + + K + +SP+ K LA +++
Sbjct: 48 AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107
Query: 347 WSTTGGLKLLNV--------------------LRGHKKGTQIVSTGADGLLKLWS----I 382
+ + L + G+++ G D + +
Sbjct: 108 THFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLV 167
Query: 383 KTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATIKLWCLT 442
+ S + + LA+ F ++ + L
Sbjct: 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227
Query: 443 DYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFD 493
+N +L+ + ++ + +
Sbjct: 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVP 277
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 41.4 bits (95), Expect = 1e-04
Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 7/64 (10%)
Query: 290 SGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWS 348
+ S + V T K+ + +SP+ + + + V +
Sbjct: 7 ANSESDNISVIDVTSN-KVTATIPVGSNPM-----GAVISPDGTKVYVANAHSNDVSIID 60
Query: 349 TTGG 352
T
Sbjct: 61 TATN 64
Score = 36.8 bits (83), Expect = 0.004
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Query: 300 WSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTTGG 352
TG K+ + D + V+P+ K + + S TV V T
Sbjct: 228 MIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276
Score = 34.1 bits (76), Expect = 0.035
Identities = 4/41 (9%), Positives = 14/41 (34%), Gaps = 3/41 (7%)
Query: 413 GGVWFVNFSPLD--RILISSSGDATIKLWCLTDYVCLKSLE 451
+ +P D ++ ++ S T+ + ++
Sbjct: 244 PDPAGIAVTP-DGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 31.8 bits (70), Expect = 0.18
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 428 ISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI-VSTGADGLLKLWSIKTS 486
I++S I + +T ++ + + GT++ V+ + + T+
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 487 TCVSTFDKH 495
++T
Sbjct: 65 NVIATVPAG 73
Score = 30.6 bits (67), Expect = 0.38
Identities = 6/59 (10%), Positives = 16/59 (27%), Gaps = 2/59 (3%)
Query: 435 TIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQI-VSTGADGLLKLWSIKTSTCVSTF 492
T+ + + G ++ V+ + + T+T +T
Sbjct: 225 TVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 27.5 bits (59), Expect = 4.2
Identities = 5/19 (26%), Positives = 7/19 (36%)
Query: 287 LLASGSLDKTVKVWSTTGG 305
+ + S TV V T
Sbjct: 258 VYVALSFCNTVSVIDTATN 276
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 36.4 bits (84), Expect = 0.007
Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 26/121 (21%)
Query: 294 DKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDK-LLASGSLDKTVKVWSTT-- 350
D V V G + + K H + SP+ K +A+G L TV V +
Sbjct: 236 DSKVPVVDGRGESEFTRYIPVPKNPH-----GLNTSPDGKYFIANGKLSPTVSVIAIDKL 290
Query: 351 -----GGLKLLNVLRGH-------------KKGTQIVSTGADGLLKLWSIKTSTCVSTFD 392
++L + + +G + D + W+I + D
Sbjct: 291 DDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGD 350
Query: 393 K 393
+
Sbjct: 351 R 351
Score = 34.9 bits (80), Expect = 0.025
Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 8/85 (9%)
Query: 269 IFVPEAEHGAFYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTV 328
I VP+ HG + +A+G L TV V + L + + +
Sbjct: 254 IPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFE-------DKIELRDTIVA 306
Query: 329 SPNDKLLASG-SLDKTVKVWSTTGG 352
P L + D ++T
Sbjct: 307 EPELGLGPLHTTFDGRGNAYTTLFI 331
Score = 28.7 bits (64), Expect = 1.9
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 12/74 (16%)
Query: 276 HGAFYTGGTVELLASGSLDKTVKVWS------TTGGLKLLNVLRG----HKKGHEKDINC 325
H F G + +D V W+ G ++ + + ++ GH
Sbjct: 316 HTTFDGRGNA--YTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLT 373
Query: 326 VTVSPNDKLLASGS 339
+ + K L S
Sbjct: 374 ESRDADGKWLVVLS 387
Score = 28.7 bits (64), Expect = 1.9
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 13/110 (11%)
Query: 398 IWTLAITKDENQIITG-GVWFVNFSPLDR-ILISSSGDATIKLWCLTDYVCL--KSLEGH 453
+ ++ I +N SP + + + T+ + + L +E
Sbjct: 242 VDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELR 301
Query: 454 DASV---------LRCHFINKGTQIVSTGADGLLKLWSIKTSTCVSTFDK 494
D V L F +G + D + W+I + D+
Sbjct: 302 DTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDR 351
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 36.0 bits (81), Expect = 0.010
Identities = 17/148 (11%), Positives = 38/148 (25%), Gaps = 26/148 (17%)
Query: 329 SPNDKLLASGSLDKTVKVWS--TTGGLKLLNVLRGHKKGTQI----------VSTGADGL 376
S + + + + VW+ G L L V+ + + V +
Sbjct: 1 SLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFR 60
Query: 377 LKLWSIKTSTCVSTFDKHALKIWTLAITKDENQIITGGVWFVNFSPLDRILISSSGDATI 436
+ + I TF + G + ++ + + S +A
Sbjct: 61 VLAYRIAPDDGALTFAAE--------------SALPGSLTHISTDHQGQFVFVGSYNAGN 106
Query: 437 KLWCLTDYVCLKSLEGHDASVLRCHFIN 464
+ + + CH N
Sbjct: 107 VSVTRLEDGLPVGVVDVVEGLDGCHSAN 134
Score = 35.6 bits (80), Expect = 0.011
Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 3/73 (4%)
Query: 426 ILISSSGDATIKLWCLTDYVCLKSLE--GHDASVLRCHFINKGTQI-VSTGADGLLKLWS 482
+ I+S I +W L L + V + V + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 483 IKTSTCVSTFDKH 495
I TF
Sbjct: 66 IAPDDGALTFAAE 78
Score = 27.1 bits (58), Expect = 6.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 108 KRMYAVVTADHNISLYRLNSETGL 131
K + A H+IS+Y + E GL
Sbjct: 288 KYLIAAGQKSHHISVYEIVGEQGL 311
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 34.9 bits (79), Expect = 0.025
Identities = 8/74 (10%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Query: 418 VNFSPLDRILISSSGDATIKLWCLTDYVCLKSLEGHDASVLRCHFINKGTQIVSTGADGL 477
+ + ++ I L +K ++ A V G ++ G D
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDAR 84
Query: 478 LKLWSIKTSTCVST 491
+ + +
Sbjct: 85 IDMIDLWAKEPTKV 98
Score = 27.2 bits (59), Expect = 5.7
Identities = 11/81 (13%), Positives = 23/81 (28%), Gaps = 3/81 (3%)
Query: 279 FYTGGTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKKGHEKDINCVTVSPNDKLLASG 338
G++ L+ + + W L+ K H K + +
Sbjct: 272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTT---FNPDA 328
Query: 339 SLDKTVKVWSTTGGLKLLNVL 359
+ ++V V+ VL
Sbjct: 329 RISQSVAVFDLKNLDAKYQVL 349
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 29.2 bits (64), Expect = 1.1
Identities = 5/39 (12%), Positives = 19/39 (48%)
Query: 313 RGHKKGHEKDINCVTVSPNDKLLASGSLDKTVKVWSTTG 351
G +G + + V V+ + ++ + + + ++++ G
Sbjct: 15 FGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 53
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 29.0 bits (64), Expect = 1.5
Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 23/142 (16%)
Query: 283 GTVELLASGSLDKTVKVWSTTGGLKLLNVLRGHKK--------GHEKDINCVTVSPNDKL 334
GT + K + + GG L + + E +I+ + K
Sbjct: 283 GTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 342
Query: 335 LASGSLDKTVKVWSTTGGLKLLNVLRGHKKGTQIVSTGADG---LLKLWSIKTSTCVSTF 391
+ D K + G + Q DG +W+ K
Sbjct: 343 MTGDGSDPEFKTLPIAEWAGITE---GQPRVVQ-GEFNKDGTEVWFSVWNGKD------- 391
Query: 392 DKHALKIWTLAITKDENQIITG 413
+ AL + T + +I
Sbjct: 392 QESALVVVD-DKTLELKHVIKD 412
>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus
influenzae [TaxId: 727]}
Length = 144
Score = 26.3 bits (58), Expect = 6.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 367 QIVSTGADGLLKLWSIKTSTCVSTFDKHALKIWTLAITKDENQ 409
+ + GLL L ++ DK A K+ I DEN
Sbjct: 18 ETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND 60
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.400
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,942,294
Number of extensions: 87470
Number of successful extensions: 464
Number of sequences better than 10.0: 1
Number of HSP's gapped: 300
Number of HSP's successfully gapped: 154
Length of query: 537
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 447
Effective length of database: 1,171,896
Effective search space: 523837512
Effective search space used: 523837512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.9 bits)