BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10949
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U1K1|SPIR_DROME Protein spire OS=Drosophila melanogaster GN=spir PE=1 SV=1
Length = 1020
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
Query: 32 VRLWIQVLRELRRGVQLKKVCHTRNPIEYQMTPYEILMDDIRSRRYKLKQVTVDGSIPPR 91
R W+QV+ ELRRGV+LKK H R PIEY++TPYEILM DIR+++Y+L++V V+G IPPR
Sbjct: 367 ARFWVQVIDELRRGVRLKKSNHERTPIEYELTPYEILMGDIRAKKYQLRKVMVNGDIPPR 426
Query: 92 VKKDAHAIILEFIRSRPPLRKASDRKL-PPRQYESTPRERLLEDIKKG 138
VKKDAHA+ILEFIRSRPPL+KASDR+L PPR E +PRE+L+E I+KG
Sbjct: 427 VKKDAHAMILEFIRSRPPLKKASDRQLGPPRMCEPSPREQLMESIRKG 474
>sp|Q29KT5|SPIR_DROPS Protein spire OS=Drosophila pseudoobscura pseudoobscura GN=spir
PE=3 SV=2
Length = 1096
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
Query: 32 VRLWIQVLRELRRGVQLKKVCHTRNPIEYQMTPYEILMDDIRSRRYKLKQVTVDGSIPPR 91
R W+QV+ ELRRGV+LKK R PIEY++TPYEILM DIR+++Y+L++V V+G IPPR
Sbjct: 404 ARFWVQVIDELRRGVRLKKSNFERTPIEYELTPYEILMGDIRAKKYQLRKVMVNGDIPPR 463
Query: 92 VKKDAHAIILEFIRSRPPLRKASDRKL-PPRQYESTPRERLLEDIKKG 138
VKKDAHA+ILEFIRSRPPL+KAS+R+L PPR TPRE+L+E I++G
Sbjct: 464 VKKDAHAMILEFIRSRPPLKKASERQLGPPRMCTPTPREQLMESIRQG 511
>sp|Q8WWL2|SPIR2_HUMAN Protein spire homolog 2 OS=Homo sapiens GN=SPIRE2 PE=1 SV=3
Length = 714
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 88/112 (78%), Gaps = 8/112 (7%)
Query: 32 VRLWIQVLRELRRGVQLKKVCHTRN---PIEYQMTPYEILMDDIRSRRYKLKQVTVDGSI 88
RLW+Q++RELRRGV+LKKV P E+Q+TP+E+LM DIR+R YKL++V VDG I
Sbjct: 243 ARLWVQLMRELRRGVKLKKVQEQEFNPLPTEFQLTPFEMLMQDIRARNYKLRKVMVDGDI 302
Query: 89 PPRVKKDAHAIILEFIRSRPPLRKASDRK---LPPRQYESTPRERLLEDIKK 137
PPRVKKDAH +IL+FIRSRPPL++ S+R+ LPP+Q + E++LE+IK+
Sbjct: 303 PPRVKKDAHELILDFIRSRPPLKQVSERRLRPLPPKQR--SLHEKILEEIKQ 352
>sp|Q1LYM3|SPIR1_DANRE Protein spire homolog 1 OS=Danio rerio GN=spire1 PE=2 SV=1
Length = 761
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
Query: 20 LNKVVNCAEGGLVRLWIQVLRELRRGVQLKKVCHTR-NP--IEYQMTPYEILMDDIRSRR 76
LN++ N R W+QV+R+LR GV+LKKV + NP IEYQ+TPYE+LMDDIRS+R
Sbjct: 251 LNELQN---ADWARFWVQVMRDLRHGVKLKKVQERQYNPLAIEYQLTPYEMLMDDIRSKR 307
Query: 77 YKLKQVTVDGSIPPRVKKDAHAIILEFIRSRPPLRKASDRKLPPRQYE-STPRERLLEDI 135
YKL++V V+G IPPR+KK AH IILEFIRSRPPL S RKL P + T ER+LE+I
Sbjct: 308 YKLRKVMVNGDIPPRLKKSAHEIILEFIRSRPPLNPVSARKLKPHAPQPPTLHERILEEI 367
Query: 136 K 136
+
Sbjct: 368 R 368
>sp|Q8K1S6|SPIR2_MOUSE Protein spire homolog 2 OS=Mus musculus GN=Spire2 PE=2 SV=1
Length = 718
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 86/110 (78%), Gaps = 4/110 (3%)
Query: 32 VRLWIQVLRELRRGVQLKKVCHTRN---PIEYQMTPYEILMDDIRSRRYKLKQVTVDGSI 88
RLW+Q++RELR GV+LKKV P E+Q+TP+E+LM DIR+R YKL++V VDG I
Sbjct: 246 ARLWVQLMRELRHGVKLKKVQEKEFNPLPTEFQLTPFEMLMQDIRARNYKLRKVMVDGDI 305
Query: 89 PPRVKKDAHAIILEFIRSRPPLRKASDRKL-PPRQYESTPRERLLEDIKK 137
PPRVKKDAH +IL+FIRSRPPL++ S+R+L P Q + T E++LE+IK+
Sbjct: 306 PPRVKKDAHELILDFIRSRPPLKQVSERQLRPVPQKQRTLHEKILEEIKQ 355
>sp|Q4R707|SPIR1_MACFA Protein spire homolog 1 OS=Macaca fascicularis GN=SPIRE1 PE=2 SV=1
Length = 584
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 14/117 (11%)
Query: 29 GGLVRLWIQVLRELRRGVQLKKVCHTRN---PIEYQMTPYEILMDDIRSRRYKLKQVTVD 85
R W+QV+R+LR GV+LKKV + PIEYQ+TPYE+LMDDIR +RY L++V V+
Sbjct: 109 ADWARFWVQVMRDLRNGVKLKKVQERQYNPLPIEYQLTPYEMLMDDIRCKRYTLRKVMVN 168
Query: 86 GSIPPRVKKDAHAIILEFIRSRPPLRKASDRKL---PPRQYESTPR---ERLLEDIK 136
G IPPR+KK AH IIL+FIRSRPPL S RKL PPR PR ER+LE+IK
Sbjct: 169 GDIPPRLKKSAHEIILDFIRSRPPLNPVSARKLKPTPPR-----PRSLHERILEEIK 220
>sp|Q08AE8|SPIR1_HUMAN Protein spire homolog 1 OS=Homo sapiens GN=SPIRE1 PE=1 SV=3
Length = 756
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
Query: 32 VRLWIQVLRELRRGVQLKKVCHTRN---PIEYQMTPYEILMDDIRSRRYKLKQVTVDGSI 88
R W+QV+R+LR GV+LKKV + PIEYQ+TPYE+LMDDIR +RY L++V V+G I
Sbjct: 270 ARFWVQVMRDLRNGVKLKKVQERQYNPLPIEYQLTPYEMLMDDIRCKRYTLRKVMVNGDI 329
Query: 89 PPRVKKDAHAIILEFIRSRPPLRKASDRKL---PPRQYESTPR---ERLLEDIK 136
PPR+KK AH IIL+FIRSRPPL S RKL PPR PR ER+LE+IK
Sbjct: 330 PPRLKKSAHEIILDFIRSRPPLNPVSARKLKPTPPR-----PRSLHERILEEIK 378
>sp|Q52KF3|SPIR1_MOUSE Protein spire homolog 1 OS=Mus musculus GN=Spire1 PE=1 SV=1
Length = 598
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 14/117 (11%)
Query: 29 GGLVRLWIQVLRELRRGVQLKKVCHTRN---PIEYQMTPYEILMDDIRSRRYKLKQVTVD 85
R W+QV+R+LR GV+LKKV + PIEYQ+TPYE+LMDDIR +RY L++V V+
Sbjct: 109 ADWARFWVQVMRDLRNGVKLKKVQQRQYNPLPIEYQLTPYEMLMDDIRCKRYTLRKVMVN 168
Query: 86 GSIPPRVKKDAHAIILEFIRSRPPLRKASDRKL---PPRQYESTPR---ERLLEDIK 136
G +PPR+KK AH +IL+FIRSRPPL S RKL PPR PR ER+LE+IK
Sbjct: 169 GDVPPRLKKSAHEVILDFIRSRPPLNPVSARKLKPTPPR-----PRSLHERILEEIK 220
>sp|Q5U3H9|SPIR2_DANRE Protein spire homolog 2 OS=Danio rerio GN=spire2 PE=2 SV=1
Length = 606
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 89/117 (76%), Gaps = 6/117 (5%)
Query: 32 VRLWIQVLRELRRGVQLKKVCHT-RNPI--EYQMTPYEILMDDIRSRRYKLKQVTVDGSI 88
RLW+Q+++ELR+GV+LKKV NP+ E+ +TP+E+LM DIR R+YKL++V VDG+I
Sbjct: 258 ARLWVQLMKELRQGVKLKKVEEQPFNPLPTEFSLTPFEMLMQDIRLRKYKLRKVVVDGNI 317
Query: 89 PPRVKKDAHAIILEFIRSRPPLRKASDRKL-PPRQYESTPRERLLEDIKKGSNHRLR 144
P VK++AH +IL+FIRSRPPL+ S+R L PP Q + +R+L +I++ +H+LR
Sbjct: 318 PTCVKRNAHELILDFIRSRPPLKPVSERSLPPPPQRPQSLHDRVLAEIRQ--DHKLR 372
>sp|Q7SAP1|MCD4_NEUCR GPI ethanolamine phosphate transferase 1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=mcd-4 PE=3 SV=1
Length = 996
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 26/60 (43%)
Query: 104 IRSRPPLRKASDRKLPPRQYESTPRERLLEDIKKGSNHRLRHRESRPDRTARKALLYSRV 163
++S P SD L PR R ++LE G +H ESRP A A LY V
Sbjct: 69 LQSHPEPYPKSDADLTPRPLAPYLRSKILEQGTFGVSHTRVPTESRPGHVALIAGLYEDV 128
>sp|P55720|Y4YL_RHISN Probable translocation protein y4yL OS=Rhizobium sp. (strain
NGR234) GN=NGR_a00610 PE=3 SV=1
Length = 222
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 87 SIPPRVKKDAHAIILEFIRSRPPLRKASDRKLPPR-QYESTPRERLLEDIKKGSNHRLRH 145
+IPP + A A+IL S P + DR PR +Y+S + E K GS L H
Sbjct: 49 TIPPNIVLYAAALILTMFVSAPVAEQTYDRITDPRLRYQS--LDDWAEAAKAGSQPLLEH 106
Query: 146 RESRPDRTARKALLYS 161
+ + R+ L S
Sbjct: 107 LKKFTNEEQRRFFLSS 122
>sp|Q8RY60|Y1733_ARATH DUF21 domain-containing protein At1g47330 OS=Arabidopsis thaliana
GN=CBSDUF7 PE=1 SV=1
Length = 527
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 105 RSRPPLRKASDRKLPPRQYESTPRERLLEDIKKGSNH 141
R PLRK S RK+ PR E+ P +L + +KG +H
Sbjct: 266 RKEVPLRKMSMRKI-PRVSETMPLYDILNEFQKGHSH 301
>sp|Q54VF1|DDX56_DICDI Probable ATP-dependent RNA helicase ddx56 OS=Dictyostelium
discoideum GN=ddx56 PE=3 SV=1
Length = 685
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 48 LKKVCHTRNPIEYQMTPYEILMDDIRSRRYKLKQV 82
LKKV TR Y + P+E M+ I RY+++ V
Sbjct: 479 LKKVSKTRGDAGYNLKPFEFKMNAIEGFRYRVEDV 513
>sp|A6L030|IF2_BACV8 Translation initiation factor IF-2 OS=Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154) GN=infB PE=3 SV=1
Length = 1003
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 76 RYKLKQV------TVDGSIPPRVKKDAHAIILEFIRSRPPLRKASDRKLPPRQYESTPRE 129
R KLKQV ++ P+V + A +I + ++ P + K +RK P+ + TP+
Sbjct: 101 RPKLKQVGKIDLDNLNKKTAPKVVEPAAKVIEQTPKAEPVVEKVVERKETPQPEKETPKP 160
Query: 130 RLLEDIK 136
++E+ K
Sbjct: 161 VVVEEKK 167
>sp|Q571B6|WHAMM_MOUSE WASP homolog-associated protein with actin, membranes and
microtubules OS=Mus musculus GN=Whamm PE=2 SV=2
Length = 793
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 37 QVLRELRRGVQLKKVCHTRNPIEYQMTPYEILMDDIRSRRYKLKQVTVD 85
QVL +R+GVQLKKV HT ++ L IR ++K+V+ D
Sbjct: 731 QVLAAIRQGVQLKKV-HTGQGVDPGKKSTSDLERSIREALERIKKVSAD 778
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,661,209
Number of Sequences: 539616
Number of extensions: 2375145
Number of successful extensions: 5744
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5707
Number of HSP's gapped (non-prelim): 34
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)