Query psy1095
Match_columns 325
No_of_seqs 251 out of 2354
Neff 11.3
Searched_HMMs 29240
Date Fri Aug 16 22:37:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 8.6E-41 2.9E-45 301.1 31.6 304 11-325 35-387 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 1.1E-40 3.8E-45 300.3 29.8 301 11-325 131-480 (570)
3 3laf_A Deleted in colorectal c 100.0 5.4E-38 1.9E-42 271.3 23.1 300 11-323 52-403 (403)
4 2rik_A Titin; I-SET IG fold, p 100.0 1.5E-35 5.3E-40 243.9 36.7 245 63-321 3-284 (284)
5 2ec8_A MAST/stem cell growth f 100.0 5.5E-36 1.9E-40 267.4 22.1 302 12-325 63-415 (524)
6 2ec8_A MAST/stem cell growth f 100.0 4.3E-35 1.5E-39 261.7 21.5 306 10-324 143-513 (524)
7 3qs9_E FL cytokine receptor; i 100.0 4.2E-35 1.4E-39 260.3 19.4 298 11-325 78-418 (527)
8 2yd9_A Receptor-type tyrosine- 100.0 4.2E-33 1.4E-37 231.7 29.4 251 63-324 4-294 (304)
9 3kld_A Contactin 4, axcam, BIG 100.0 1.3E-34 4.4E-39 248.6 20.8 292 12-321 39-383 (384)
10 3dmk_A DOWN syndrome cell adhe 100.0 2.1E-33 7E-38 263.4 29.7 290 12-325 374-717 (816)
11 3qs9_E FL cytokine receptor; i 100.0 8.4E-34 2.9E-38 251.9 24.7 288 12-322 170-511 (527)
12 3qs7_E FL cytokine receptor; i 100.0 2.4E-34 8.3E-39 249.0 20.2 291 12-323 79-416 (423)
13 1cs6_A Axonin-1; neural cell a 100.0 2.8E-34 9.5E-39 246.4 19.9 291 11-321 37-382 (382)
14 1qz1_A Neural cell adhesion mo 100.0 4.7E-32 1.6E-36 223.8 30.3 243 65-322 2-291 (291)
15 1bih_A Hemolin; insect immunit 100.0 1.3E-33 4.5E-38 243.2 21.8 296 10-320 36-395 (395)
16 3p3y_A Neurofascin; IG domains 100.0 1.5E-33 5.2E-38 243.5 22.2 297 11-321 47-403 (404)
17 2wim_A N-CAM 2, NCAM2, neural 100.0 3.3E-32 1.1E-36 224.8 28.8 243 64-324 3-287 (291)
18 1e07_A Carcinoembryonic antige 100.0 7.5E-33 2.6E-37 253.0 26.5 284 12-321 319-640 (642)
19 3dmk_A DOWN syndrome cell adhe 100.0 1.6E-32 5.3E-37 257.4 28.9 278 32-325 305-621 (816)
20 2v5m_A Dscam; neurobiology SPL 100.0 5.5E-34 1.9E-38 245.0 15.6 295 11-319 34-387 (388)
21 2rik_A Titin; I-SET IG fold, p 100.0 8.9E-33 3.1E-37 227.4 22.0 238 11-262 35-282 (284)
22 1e07_A Carcinoembryonic antige 100.0 2.9E-32 9.8E-37 249.2 26.8 275 12-323 234-559 (642)
23 2rcj_C Light chain; immunoglob 100.0 2.6E-32 9E-37 243.6 21.9 280 33-318 70-417 (523)
24 2ocw_A Polymeric-immunoglobuli 100.0 9.6E-32 3.3E-36 243.1 24.7 278 34-324 186-549 (585)
25 2y25_A Myomesin; structural pr 100.0 4.9E-32 1.7E-36 226.4 19.6 242 64-322 6-316 (317)
26 2nzi_A Titin; IG-domain, FNIII 100.0 4.7E-30 1.6E-34 213.3 28.9 242 64-314 3-283 (305)
27 1wio_A CD4, T-cell surface gly 100.0 1.8E-32 6E-37 233.6 13.4 262 32-319 66-361 (363)
28 3kld_A Contactin 4, axcam, BIG 100.0 3.9E-31 1.3E-35 226.9 20.9 231 11-263 133-382 (384)
29 2ocw_A Polymeric-immunoglobuli 100.0 1.3E-30 4.6E-35 235.7 25.5 275 34-322 76-442 (585)
30 1z7z_I Intercellular adhesion 100.0 3.8E-31 1.3E-35 231.7 19.3 274 33-325 50-371 (450)
31 2jll_A NCAM2, neural cell adhe 100.0 2.3E-29 7.8E-34 216.3 30.0 243 65-320 1-287 (389)
32 2y23_A Myomesin; structural pr 100.0 4.1E-30 1.4E-34 214.3 21.8 239 74-321 10-312 (312)
33 1z7z_I Intercellular adhesion 100.0 5.5E-30 1.9E-34 224.4 21.8 276 11-322 119-450 (450)
34 1qz1_A Neural cell adhesion mo 100.0 2.3E-30 7.9E-35 213.7 17.4 239 10-263 32-289 (291)
35 2rcj_C Light chain; immunoglob 100.0 1.4E-29 4.8E-34 225.9 23.7 237 11-255 146-411 (523)
36 2y25_A Myomesin; structural pr 100.0 4.4E-31 1.5E-35 220.6 12.4 245 11-263 37-314 (317)
37 1ry7_B FGFR-3, fibroblast grow 100.0 1.8E-31 6.2E-36 224.7 9.7 242 70-323 13-329 (334)
38 3laf_A Deleted in colorectal c 100.0 9.6E-30 3.3E-34 219.6 20.5 233 12-263 152-400 (403)
39 2yd9_A Receptor-type tyrosine- 100.0 4.2E-30 1.4E-34 213.6 16.9 233 12-264 37-291 (304)
40 3qs7_E FL cytokine receptor; i 100.0 3.6E-29 1.2E-33 216.6 22.3 259 42-324 4-326 (423)
41 1ry7_B FGFR-3, fibroblast grow 100.0 1.7E-30 5.6E-35 218.9 12.8 254 11-269 39-332 (334)
42 1cs6_A Axonin-1; neural cell a 100.0 2.1E-29 7.2E-34 216.0 18.7 229 11-263 132-381 (382)
43 2a38_A Titin; Z1Z2, structural 100.0 3.3E-28 1.1E-32 188.6 23.7 188 64-262 4-193 (194)
44 3oq3_B IFN-alpha/beta binding 100.0 4.3E-29 1.5E-33 209.8 19.2 241 11-262 68-328 (329)
45 3p3y_A Neurofascin; IG domains 100.0 1.1E-28 3.9E-33 212.9 22.2 235 11-263 147-402 (404)
46 2y23_A Myomesin; structural pr 100.0 9.4E-30 3.2E-34 212.1 14.9 240 11-262 32-310 (312)
47 1qgc_4 Protein (immunoglobulin 100.0 1.1E-30 3.7E-35 228.0 9.6 277 33-318 75-436 (438)
48 2o26_X MAST/stem cell growth f 100.0 7.3E-29 2.5E-33 204.7 19.7 230 63-323 10-290 (290)
49 3rjd_A High affinity immunoglo 100.0 7E-29 2.4E-33 201.6 19.3 222 65-321 1-262 (262)
50 1itb_B Type 1 interleukin-1 re 100.0 1.5E-28 5.1E-33 205.2 21.2 246 11-262 36-312 (315)
51 4fqp_A Poliovirus receptor; im 100.0 6.3E-29 2.1E-33 207.3 18.6 245 68-323 3-306 (313)
52 3ejj_X Macrophage colony-stimu 100.0 7.5E-29 2.5E-33 204.4 18.6 240 13-264 32-281 (289)
53 2wim_A N-CAM 2, NCAM2, neural 100.0 1.1E-29 3.7E-34 209.6 13.1 214 33-265 60-285 (291)
54 2o26_X MAST/stem cell growth f 100.0 2.1E-29 7.2E-34 207.9 14.3 239 12-264 39-288 (290)
55 4fqp_A Poliovirus receptor; im 100.0 6.5E-29 2.2E-33 207.2 17.5 218 32-268 78-308 (313)
56 2j8h_A Titin, connectin; cardi 100.0 2.5E-27 8.7E-32 184.1 24.7 191 64-263 3-196 (197)
57 2yd1_A Tyrosine-protein phosph 100.0 6.7E-27 2.3E-31 183.9 26.9 192 64-266 5-202 (212)
58 3v2a_R Vascular endothelial gr 100.0 8.8E-30 3E-34 237.4 11.0 208 32-255 182-408 (772)
59 2v5m_A Dscam; neurobiology SPL 100.0 2.1E-28 7.2E-33 210.2 18.6 224 11-262 136-387 (388)
60 3o4o_C Interleukin-1 receptor 100.0 3.2E-29 1.1E-33 211.5 13.1 247 62-323 15-337 (339)
61 3lcy_A Titin; A-BAND, IG tande 100.0 3.4E-27 1.1E-31 183.3 23.5 191 62-263 4-195 (197)
62 1bih_A Hemolin; insect immunit 100.0 4.4E-28 1.5E-32 208.6 20.3 210 32-262 160-394 (395)
63 3ejj_X Macrophage colony-stimu 100.0 1.6E-27 5.4E-32 196.4 22.1 236 64-323 3-283 (289)
64 4fom_A Poliovirus receptor-rel 100.0 1.1E-28 3.7E-33 205.4 15.2 241 73-324 7-303 (308)
65 2yd6_A PTPRD protein; hydrolas 100.0 2.1E-26 7.2E-31 181.1 27.3 197 63-265 4-205 (212)
66 3u83_A Poliovirus receptor-rel 100.0 2E-27 6.8E-32 199.7 22.5 249 65-323 14-322 (331)
67 3v2a_R Vascular endothelial gr 100.0 7.9E-28 2.7E-32 224.3 19.8 286 32-325 85-423 (772)
68 4dkd_C Macrophage colony-stimu 100.0 4.7E-28 1.6E-32 199.9 16.0 222 33-265 51-282 (292)
69 3oq3_B IFN-alpha/beta binding 100.0 1.7E-27 5.9E-32 200.0 19.6 234 66-320 30-329 (329)
70 2v44_A NCAM2, neural cell adhe 100.0 3.5E-26 1.2E-30 176.4 24.6 181 67-263 4-186 (189)
71 1itb_B Type 1 interleukin-1 re 100.0 9.1E-29 3.1E-33 206.5 10.1 228 74-321 14-314 (315)
72 2wng_A Tyrosine-protein phosph 100.0 2.7E-27 9.1E-32 198.7 18.9 248 65-318 3-317 (327)
73 2wv3_A Neuroplastin; igcam, me 100.0 1.5E-25 5.2E-30 173.0 27.2 181 64-263 2-189 (190)
74 4dkd_C Macrophage colony-stimu 100.0 2.6E-28 8.9E-33 201.5 12.3 236 64-323 3-283 (292)
75 2c5d_C AXL oncogene, tyrosine- 100.0 6.5E-26 2.2E-30 175.8 25.0 177 65-262 2-191 (195)
76 1igt_B IGG2A intact antibody - 100.0 5.3E-28 1.8E-32 211.4 13.7 220 33-254 79-331 (444)
77 3vh8_G Killer cell immunoglobu 100.0 1.1E-27 3.6E-32 200.1 14.8 243 61-323 20-315 (316)
78 4dep_C Interleukin-1 receptor 100.0 2E-27 6.9E-32 201.2 16.4 234 72-321 14-333 (349)
79 1epf_A NCAM, protein (neural c 100.0 6.3E-26 2.2E-30 175.3 23.3 183 65-262 2-189 (191)
80 4dep_C Interleukin-1 receptor 99.9 5.1E-28 1.8E-32 204.9 10.7 247 11-263 48-332 (349)
81 2iep_A Muscle-specific kinase 99.9 2.4E-26 8.3E-31 177.7 19.0 184 62-264 4-190 (192)
82 3rbs_A Myomesin-1; immunoglobu 99.9 1.9E-26 6.5E-31 180.1 18.5 184 65-262 3-205 (207)
83 2c1o_A IGK-C protein; FAB frag 99.9 5.3E-27 1.8E-31 189.7 15.3 212 40-254 11-245 (254)
84 4fom_A Poliovirus receptor-rel 99.9 3.5E-28 1.2E-32 202.3 8.3 214 32-266 73-302 (308)
85 3rjd_A High affinity immunoglo 99.9 5.3E-27 1.8E-31 190.5 14.7 210 12-254 33-249 (262)
86 2va4_A NCAM2, N-CAM 2, neural 99.9 7.1E-25 2.4E-29 169.4 25.7 184 64-262 1-191 (192)
87 1wio_A CD4, T-cell surface gly 99.9 7.1E-27 2.4E-31 198.9 15.4 214 75-320 4-292 (363)
88 2wng_A Tyrosine-protein phosph 99.9 1.1E-26 3.6E-31 195.0 16.0 216 31-255 72-310 (327)
89 3u83_A Poliovirus receptor-rel 99.9 1.4E-26 4.8E-31 194.5 16.4 214 31-266 90-322 (331)
90 1qgc_4 Protein (immunoglobulin 99.9 2.2E-26 7.6E-31 200.8 18.0 183 67-253 3-206 (438)
91 2oz4_A Intercellular adhesion 99.9 1.8E-25 6.1E-30 181.9 21.6 216 75-322 13-265 (265)
92 1hzh_H IGG, immunoglobulin hea 99.9 1.7E-27 5.8E-32 209.0 9.1 219 33-253 79-339 (457)
93 4fa8_A Secreted protein BARF1; 99.9 2E-26 6.8E-31 179.1 14.1 171 74-256 2-194 (203)
94 1rhf_A Tyrosine-protein kinase 99.9 3.1E-25 1.1E-29 170.0 20.6 175 65-262 2-181 (182)
95 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.9E-25 6.6E-30 172.1 19.2 181 64-263 1-187 (189)
96 3vh8_G Killer cell immunoglobu 99.9 2.2E-26 7.5E-31 192.2 14.2 227 11-253 52-297 (316)
97 3mjg_X Beta-type platelet-deri 99.9 8.2E-26 2.8E-30 186.2 17.0 238 13-267 28-281 (289)
98 3o4o_C Interleukin-1 receptor 99.9 9.6E-28 3.3E-32 202.4 5.4 248 11-262 55-333 (339)
99 3mjg_X Beta-type platelet-deri 99.9 8.7E-26 3E-30 186.1 16.9 231 66-324 1-281 (289)
100 2r15_A Myomesin-1; sarcomeric 99.9 3.6E-25 1.2E-29 173.9 19.0 178 79-263 16-209 (212)
101 3ojm_B Fibroblast growth facto 99.9 2.4E-25 8.3E-30 177.1 17.0 200 64-267 14-224 (231)
102 2vr9_A Roundabout 1, ROBO; imm 99.9 2.8E-25 9.5E-30 175.2 16.5 186 63-262 7-204 (217)
103 1igy_B IGG1 intact antibody MA 99.9 1.2E-27 4.2E-32 208.5 2.7 219 33-253 78-320 (434)
104 3grw_A Fibroblast growth facto 99.9 2.1E-24 7.2E-29 173.0 21.3 200 64-267 10-221 (241)
105 3k0w_A Mucosa-associated lymph 99.9 2.9E-24 9.8E-29 169.6 21.0 173 64-262 17-200 (218)
106 2v9r_A Roundabout homolog 1; p 99.9 1.5E-24 5.3E-29 170.2 18.9 187 63-265 7-203 (212)
107 1iga_A IGA1; immunoglobulin; N 99.9 3E-24 1E-28 189.2 22.3 219 33-255 80-336 (475)
108 1zvo_C Myeloma immunoglobulin 99.9 7.8E-24 2.7E-28 187.9 24.2 220 33-253 80-386 (512)
109 1f97_A Junction adhesion molec 99.9 1.4E-24 4.9E-29 170.3 17.3 182 65-262 1-205 (212)
110 3p2t_A Leukocyte immunoglobuli 99.9 2.6E-24 9E-29 166.9 17.2 174 64-252 4-179 (196)
111 2ifg_A High affinity nerve gro 99.9 3.5E-25 1.2E-29 187.2 13.2 206 44-263 136-344 (347)
112 3sgj_C Human FCG3A receptor; r 99.9 1.4E-24 4.9E-29 169.3 14.6 170 64-267 6-177 (204)
113 3mj8_L Stimulatory hamster ant 99.9 1.7E-24 6E-29 170.2 15.2 189 66-258 2-207 (213)
114 3s97_C Contactin-1; carbonic a 99.9 4.6E-24 1.6E-28 166.0 17.2 181 69-263 12-200 (201)
115 1vca_A VCAM-D1,2, human vascul 99.9 6.9E-23 2.4E-27 159.5 22.5 188 67-266 2-199 (202)
116 3bp6_B Programmed cell death 1 99.9 3.2E-23 1.1E-27 161.6 19.7 180 67-263 4-192 (202)
117 2x1w_L Vascular endothelial gr 99.9 1.1E-23 3.7E-28 165.6 16.9 185 71-264 13-207 (213)
118 2wqr_A IG epsilon chain C regi 99.9 2.2E-25 7.7E-30 186.6 6.6 241 11-253 41-309 (323)
119 1za6_B IGG heavy chain; immuno 99.9 8.6E-24 2.9E-28 178.5 16.1 180 70-254 5-207 (344)
120 1fnl_A Low affinity immunoglob 99.9 2.4E-23 8.1E-28 158.5 16.3 165 64-262 6-172 (175)
121 2oz4_A Intercellular adhesion 99.9 8.3E-25 2.8E-29 177.9 8.7 212 11-263 36-263 (265)
122 2d3v_A Leukocyte immunoglobuli 99.9 6E-24 2.1E-28 164.8 13.1 175 64-252 4-180 (196)
123 3d9a_L Light chain of hyhel10 99.9 9.6E-24 3.3E-28 165.9 14.4 184 68-254 4-203 (213)
124 1lk3_L 9D7 light chain; antige 99.9 1.6E-23 5.3E-28 164.3 15.1 183 68-254 4-202 (210)
125 3tv3_L PGT128 light chain, IG 99.9 1.5E-23 5.1E-28 164.6 14.6 186 67-257 3-204 (211)
126 3nl4_L Antigen binding fragmen 99.9 2.3E-23 7.7E-28 163.8 15.6 178 66-248 2-198 (213)
127 3jz7_A MCAR, CAR, coxsackievir 99.9 7.9E-24 2.7E-28 166.3 12.8 179 69-263 4-211 (214)
128 1ugn_A LIR1, leukocyte immunog 99.9 8.5E-24 2.9E-28 164.3 12.7 175 64-252 4-181 (198)
129 1igt_B IGG2A intact antibody - 99.9 5.7E-23 1.9E-27 179.5 18.8 180 69-255 4-210 (444)
130 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.9E-22 6.6E-27 154.7 19.4 168 75-263 8-182 (184)
131 1f2q_A High affinity immunoglo 99.9 2.1E-23 7.1E-28 158.9 13.8 168 64-265 3-172 (176)
132 1nbq_A JAM, junctional adhesio 99.9 5.8E-24 2E-28 166.5 10.9 183 64-258 3-201 (209)
133 1q0x_L FAB 9B1, light chain; a 99.9 1.3E-22 4.3E-27 159.4 18.5 185 68-255 4-206 (212)
134 2jll_A NCAM2, neural cell adhe 99.9 5E-22 1.7E-26 170.5 23.1 262 32-314 62-378 (389)
135 1za6_B IGG heavy chain; immuno 99.9 2.5E-24 8.7E-29 181.8 8.6 219 33-253 79-330 (344)
136 3r06_A Anti-mouse CD3epsilon a 99.9 5.9E-23 2E-27 161.4 15.9 185 66-253 2-202 (213)
137 1uct_A Immunoglobulin alpha FC 99.9 4.2E-23 1.4E-27 162.6 14.8 170 63-251 7-180 (218)
138 2gi7_A GPVI protein; IG-like d 99.9 3.1E-23 1E-27 159.2 13.2 161 63-252 6-168 (184)
139 2fbo_J V1V2;, variable region- 99.9 6.3E-23 2.1E-27 165.2 15.6 187 68-260 5-248 (250)
140 3s96_B 3B5H10 FAB light chain; 99.9 1E-22 3.5E-27 160.6 16.0 188 66-257 2-213 (218)
141 4f80_A Butyrophilin subfamily 99.9 8E-22 2.7E-26 156.4 21.1 178 71-262 10-211 (226)
142 2nzi_A Titin; IG-domain, FNIII 99.9 1.1E-22 3.9E-27 168.7 15.9 218 11-256 34-282 (305)
143 3sob_L Antibody light chain; b 99.9 2E-22 6.9E-27 160.9 16.5 188 64-254 23-226 (237)
144 3r4d_A CEA-related cell adhesi 99.9 4.9E-22 1.7E-26 155.5 18.2 175 69-262 3-198 (208)
145 1iga_A IGA1; immunoglobulin; N 99.9 1.9E-21 6.5E-26 171.3 24.0 182 68-253 4-215 (475)
146 4frw_A Poliovirus receptor-rel 99.9 3E-22 1E-26 157.5 16.9 182 70-263 4-210 (218)
147 3ry4_A Low affinity immunoglob 99.9 2E-22 7E-27 152.5 15.3 164 65-262 4-169 (170)
148 1oll_A NK receptor; immune sys 99.9 2E-22 7E-27 155.1 15.1 168 64-251 3-172 (188)
149 1nfd_E H57 FAB; complex (immun 99.9 1.3E-23 4.4E-28 165.1 7.7 183 68-254 3-202 (212)
150 2wqr_A IG epsilon chain C regi 99.9 9.7E-23 3.3E-27 170.6 12.9 183 64-252 6-202 (323)
151 2ny1_B T-cell surface glycopro 99.9 1.2E-22 4.2E-27 155.8 12.0 161 74-266 4-181 (184)
152 3bkj_L WO2 IGG2A FAB fragment 99.9 3.5E-22 1.2E-26 161.1 14.5 188 64-254 33-241 (252)
153 2xzc_L FAB A.17 light chain; i 99.9 4.6E-22 1.6E-26 156.6 14.8 180 72-254 7-205 (216)
154 1hng_A CD2; T lymphocyte adhes 99.9 1.3E-22 4.3E-27 154.4 11.1 155 75-262 6-174 (176)
155 2j8h_A Titin, connectin; cardi 99.9 1.5E-20 5.1E-25 145.7 21.7 153 163-321 3-197 (197)
156 1moe_A Anti-CEA MAB T84.66; an 99.9 1.7E-21 5.8E-26 155.9 16.8 181 67-249 3-219 (240)
157 2a38_A Titin; Z1Z2, structural 99.9 9.1E-21 3.1E-25 146.5 20.2 151 164-320 5-194 (194)
158 1hzh_H IGG, immunoglobulin hea 99.9 1.9E-21 6.4E-26 170.5 17.9 182 69-255 4-220 (457)
159 2ghw_B Anti-SARS SCFV antibody 99.9 8.7E-21 3E-25 152.5 19.8 186 71-262 8-240 (247)
160 2pet_A Lutheran blood group gl 99.9 8.2E-22 2.8E-26 156.7 13.1 175 70-250 5-211 (231)
161 1nkr_A P58-CL42 KIR; inhibitor 99.9 3.2E-21 1.1E-25 150.1 16.1 172 64-251 7-184 (201)
162 1igy_B IGG1 intact antibody MA 99.9 1.3E-23 4.5E-28 183.0 2.7 179 70-254 4-205 (434)
163 2j6e_L IGM, FAB light chain; a 99.9 1.9E-22 6.4E-27 160.9 9.0 187 66-255 21-226 (234)
164 3sbw_C Programmed cell death 1 99.9 5.1E-21 1.7E-25 151.2 16.7 181 70-263 6-210 (222)
165 1c1e_H Catalytic antibody 1E9 99.9 6.7E-21 2.3E-25 150.3 17.1 183 70-260 5-216 (219)
166 3lcy_A Titin; A-BAND, IG tande 99.9 3.1E-20 1.1E-24 143.8 20.6 151 164-322 7-197 (197)
167 3mj6_A Junctional adhesion mol 99.9 1E-21 3.5E-26 159.9 12.1 190 65-267 5-240 (268)
168 2znx_A SCFV; fluorotryptohpan, 99.9 9.9E-21 3.4E-25 151.7 17.6 182 67-250 3-222 (242)
169 2if7_A SLAM family member 6; N 99.9 1.2E-20 4.1E-25 145.7 17.4 161 71-257 4-185 (193)
170 3auv_A SC-DSFV derived from th 99.9 6.4E-21 2.2E-25 155.8 16.7 185 64-250 11-235 (276)
171 3pv7_A B7-H6, IG-like domain-c 99.9 4.2E-20 1.4E-24 148.6 20.9 184 70-262 8-224 (248)
172 1jbj_A CD3 epsilon and gamma e 99.9 5.5E-22 1.9E-26 152.3 9.2 150 76-254 10-179 (186)
173 3esu_F Antibody 14B7* light ch 99.9 1.3E-20 4.3E-25 151.8 17.7 182 66-249 5-231 (250)
174 3qib_D 2B4 beta chain; IG doma 99.9 2E-21 6.9E-26 158.3 13.1 212 40-253 3-244 (270)
175 4dzb_B Vbeta2 (MAIT T cell rec 99.9 5E-21 1.7E-25 153.8 15.1 187 67-253 3-220 (246)
176 1p6f_A NKP46, natural cytotoxi 99.9 6.2E-21 2.1E-25 152.4 15.4 183 63-265 5-192 (242)
177 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 1E-20 3.4E-25 149.6 16.5 183 70-260 5-219 (222)
178 3bqu_C 3H6 FAB light chain; be 99.9 9.4E-23 3.2E-27 162.5 4.8 186 65-253 23-224 (233)
179 2zg1_A Sialic acid-binding IG- 99.9 1.5E-20 5E-25 147.7 16.8 172 69-260 4-209 (214)
180 1svz_A Immunoglobulin;, single 99.9 1E-20 3.6E-25 152.0 16.3 182 67-250 3-228 (247)
181 1f3r_B FV antibody fragment; I 99.9 4.6E-21 1.6E-25 155.0 14.2 176 70-251 5-232 (257)
182 2p1y_A Bispecific alpha/beta T 99.9 1.5E-20 5.2E-25 150.2 16.6 178 67-251 2-222 (238)
183 3d9a_H Heavy chain of hyhel10 99.9 7.6E-21 2.6E-25 149.0 14.5 179 70-257 5-207 (210)
184 1mju_H Immunoglobulin MS6-12; 99.9 3.4E-20 1.2E-24 147.0 17.9 188 69-262 4-215 (227)
185 1nqb_A Single-chain antibody f 99.9 2.9E-20 1E-24 150.2 17.7 184 69-262 4-231 (256)
186 2fbj_H IGA-kappa J539 FAB (hea 99.9 5E-20 1.7E-24 145.4 18.6 181 70-255 5-212 (220)
187 4i0k_A CD276 antigen; immunogl 99.9 1.3E-21 4.5E-26 154.6 9.2 181 73-264 3-206 (222)
188 3umt_A SCFV heavy chain and li 99.9 1.2E-19 4.2E-24 146.6 20.2 203 70-323 7-247 (256)
189 2gjj_A A21 single-chain antibo 99.8 5.4E-20 1.9E-24 149.2 17.6 185 64-250 4-239 (264)
190 3ux9_B SCFV antibody; five hel 99.8 5.2E-20 1.8E-24 148.8 17.4 179 70-251 7-236 (256)
191 2yd6_A PTPRD protein; hydrolas 99.8 2.6E-19 8.9E-24 140.4 20.9 153 164-323 6-206 (212)
192 3juy_B 3B3 single chain varian 99.8 6.7E-20 2.3E-24 148.1 17.7 184 64-252 5-244 (256)
193 1pz5_B Heavy chain of FAB (SYA 99.8 4.9E-20 1.7E-24 145.4 16.4 182 70-259 5-216 (220)
194 2yd1_A Tyrosine-protein phosph 99.8 5.7E-19 1.9E-23 138.5 22.2 154 163-323 5-202 (212)
195 1gsm_A Madcam-1, mucosal addre 99.8 1.9E-18 6.5E-23 133.1 24.1 172 70-255 11-196 (210)
196 1op3_H FAB 2G12, heavy chain; 99.8 5.3E-20 1.8E-24 145.7 15.9 181 70-255 5-216 (225)
197 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 1.6E-19 5.5E-24 145.8 19.0 182 66-253 4-235 (256)
198 1dee_B IGM RF 2A2; FAB-IBP com 99.8 1.9E-19 6.7E-24 142.3 19.1 185 70-258 5-221 (223)
199 4fmk_A Poliovirus receptor-rel 99.8 3.1E-20 1.1E-24 146.7 14.5 182 71-262 7-215 (225)
200 3nfj_J T cell receptor beta ch 99.8 7.1E-20 2.4E-24 147.0 16.6 187 67-253 3-219 (245)
201 1dr9_A B7-1 (CD80), T lymphocy 99.8 2.8E-20 9.7E-25 144.6 13.2 172 74-259 3-196 (201)
202 3uzq_A Anti-dengue MAB 4E11; d 99.8 7.5E-20 2.6E-24 147.6 16.0 179 68-252 4-231 (253)
203 3gkz_A Anti-methamphetamine si 99.8 1.7E-19 5.9E-24 145.8 17.6 181 65-251 8-235 (257)
204 1qok_A MFE-23 recombinant anti 99.8 2.3E-19 7.8E-24 147.1 18.4 177 68-251 29-254 (282)
205 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.2E-19 4.1E-24 147.6 16.3 185 64-250 14-254 (268)
206 2rgs_A I, IG gamma-2B heavy ch 99.8 1.7E-20 5.8E-25 147.8 10.7 186 63-253 7-205 (218)
207 2vol_A Murine IGG FC; FC, zinc 99.8 2.3E-20 7.8E-25 145.9 11.3 181 68-253 5-197 (207)
208 3bae_H WO2 IGG2A FAB fragment 99.8 1.2E-19 4.2E-24 143.9 15.7 181 70-257 5-219 (228)
209 2wv3_A Neuroplastin; igcam, me 99.8 1.2E-18 4.2E-23 134.1 20.9 145 164-321 3-190 (190)
210 3nl4_H Antigen binding fragmen 99.8 1.7E-19 5.9E-24 141.8 16.4 184 69-260 3-210 (215)
211 1sy6_A T-cell surface glycopro 99.8 1.1E-20 3.8E-25 147.1 9.3 159 77-261 15-201 (204)
212 2va4_A NCAM2, N-CAM 2, neural 99.8 5E-19 1.7E-23 136.4 18.6 147 164-320 2-192 (192)
213 1dn0_B IGM-kappa cold agglutin 99.8 6.7E-19 2.3E-23 140.0 19.7 188 70-261 5-224 (232)
214 4ei6_B Vbeta16 XV19 type II na 99.8 1E-19 3.6E-24 146.0 15.0 186 66-252 3-218 (245)
215 1hxm_B Gamma-delta T-cell rece 99.8 3.5E-19 1.2E-23 142.6 18.0 192 66-262 2-227 (242)
216 3q5y_A TCR N15 beta; IG, T cel 99.8 1.1E-19 3.8E-24 145.3 14.9 186 66-252 3-212 (240)
217 1zvo_C Myeloma immunoglobulin 99.8 9.7E-19 3.3E-23 155.2 22.1 179 72-254 304-493 (512)
218 2wbj_D OB TCR; transmembrane, 99.8 3.1E-19 1.1E-23 146.0 17.4 191 64-254 23-246 (279)
219 3eow_R Poliovirus receptor; im 99.8 2.3E-20 7.9E-25 147.4 10.1 178 71-260 5-208 (221)
220 3omz_A Human vdelta1 gamma del 99.8 7.6E-20 2.6E-24 148.1 13.3 181 65-249 2-230 (259)
221 1b6u_A KIR2DL3, P58 killer cel 99.8 4.7E-20 1.6E-24 148.4 12.0 172 64-251 6-183 (257)
222 1hnf_A CD2; T lymphocyte adhes 99.8 9.4E-20 3.2E-24 138.8 12.9 157 72-261 6-178 (182)
223 3pl6_D MBP peptide / T-cell re 99.8 9.9E-20 3.4E-24 148.1 13.6 188 65-253 26-241 (268)
224 2w59_A IGY FCU3-4; immunoglobu 99.8 5.7E-20 2E-24 146.0 11.6 188 64-253 11-217 (231)
225 3rbs_A Myomesin-1; immunoglobu 99.8 1.9E-20 6.6E-25 146.0 8.4 142 11-155 33-205 (207)
226 2xqy_G A13-D6.3 monoclonal ant 99.8 8.2E-19 2.8E-23 141.8 18.2 181 69-255 10-216 (261)
227 2v5t_A NCAM2, N-CAM 2, neural 99.8 1.4E-18 4.7E-23 133.5 18.7 147 164-321 2-188 (189)
228 2iep_A Muscle-specific kinase 99.8 4.9E-19 1.7E-23 136.5 16.2 148 164-323 7-192 (192)
229 3knb_B Obscurin-like protein 1 99.8 4.3E-19 1.5E-23 122.7 13.1 96 63-158 11-106 (107)
230 3mtr_A N-CAM-1, NCAM-1, neural 99.8 3.1E-19 1.1E-23 140.3 13.9 185 64-263 18-208 (215)
231 3m8o_H Immunoglobulin A1 heavy 99.8 1E-18 3.4E-23 138.0 16.5 181 70-254 5-213 (221)
232 3bn9_D E2 FAB heavy chain; ant 99.8 5.1E-19 1.8E-23 142.5 15.0 181 70-255 5-221 (257)
233 2gki_A Nuclease; anti-DNA anti 99.8 7.4E-19 2.5E-23 144.6 15.7 179 69-251 26-258 (291)
234 1ccz_A Protein (CD58); LFA-3, 99.8 1.8E-19 6.1E-24 136.1 10.4 152 74-260 4-167 (171)
235 1bec_A 14.3.D T cell antigen r 99.8 1.3E-18 4.5E-23 138.9 15.5 184 68-252 2-211 (238)
236 3grw_A Fibroblast growth facto 99.8 1.3E-18 4.4E-23 139.1 15.3 146 173-325 24-222 (241)
237 1i1c_A IGG2A, IG gamma-2A chai 99.8 2.4E-19 8.4E-24 142.9 10.8 186 65-253 15-211 (239)
238 3liz_H 4C3 monoclonal antibody 99.8 2.4E-18 8.2E-23 138.7 16.3 187 70-262 5-218 (253)
239 2dru_A Chimera of CD48 antigen 99.8 1.6E-18 5.5E-23 132.0 14.5 154 73-259 7-176 (180)
240 2r15_A Myomesin-1; sarcomeric 99.8 2.5E-19 8.7E-24 140.3 10.3 148 10-157 32-210 (212)
241 1c5d_H Monoclonal antibody aga 99.8 2.9E-18 1E-22 134.7 16.4 178 71-257 6-209 (215)
242 3ojm_B Fibroblast growth facto 99.8 1.5E-18 5.3E-23 137.7 14.9 146 172-324 27-224 (231)
243 3tv3_H PGT128 heavy chain, IG 99.8 1.8E-18 6.1E-23 138.2 15.3 187 70-261 5-234 (239)
244 3fku_X Neutralizing antibody F 99.8 2.3E-18 7.9E-23 140.8 16.1 179 67-251 3-234 (280)
245 2c5d_C AXL oncogene, tyrosine- 99.8 1.2E-17 4.2E-22 129.0 19.1 152 164-319 2-191 (195)
246 3qhz_H Human monoclonal antibo 99.8 3.4E-18 1.1E-22 136.0 15.7 187 70-261 5-226 (232)
247 1l6x_A Immunoglobulin gamma-1 99.8 6.2E-19 2.1E-23 137.7 10.8 185 66-253 2-197 (207)
248 2v9r_A Roundabout homolog 1; p 99.8 4E-18 1.4E-22 133.4 15.1 158 164-325 9-206 (212)
249 4acp_A IG gamma-1 chain C regi 99.8 2.5E-19 8.5E-24 142.6 8.2 204 46-252 1-217 (240)
250 3u2s_H PG9 heavy chain; greek 99.8 7.3E-18 2.5E-22 135.2 16.1 188 69-261 3-235 (248)
251 3knb_A Titin; IG-like, titin, 99.8 6.5E-18 2.2E-22 115.3 13.3 94 64-157 4-99 (100)
252 3to4_D NKT vbeta2 (mouse varia 99.8 1.3E-18 4.3E-23 140.3 11.4 184 68-252 4-218 (253)
253 1ypz_F T-cell receptor gamma c 99.8 1.1E-17 3.7E-22 132.8 15.0 181 68-253 4-216 (230)
254 2vr9_A Roundabout 1, ROBO; imm 99.8 2.2E-17 7.5E-22 129.8 16.5 153 163-320 8-205 (217)
255 1oga_E TRBC1, T-cell receptor 99.8 6E-18 2E-22 136.3 13.5 186 67-253 5-218 (252)
256 4fa8_A Secreted protein BARF1; 99.8 1.9E-19 6.5E-24 139.7 4.5 117 33-149 69-194 (203)
257 3n9g_H FAB fragment of MAB CR4 99.8 1.8E-17 6.3E-22 131.5 16.1 188 70-262 5-223 (230)
258 1epf_A NCAM, protein (neural c 99.8 2.7E-17 9.3E-22 126.5 16.6 151 165-320 3-190 (191)
259 1rhf_A Tyrosine-protein kinase 99.8 2.4E-17 8.2E-22 125.8 16.0 147 165-320 3-182 (182)
260 3s97_C Contactin-1; carbonic a 99.8 4E-18 1.4E-22 132.2 11.4 142 11-156 40-200 (201)
261 3sgj_C Human FCG3A receptor; r 99.8 1.9E-17 6.4E-22 128.9 13.9 141 164-323 7-176 (204)
262 1f97_A Junction adhesion molec 99.7 2.4E-17 8.1E-22 129.0 13.9 148 166-323 3-209 (212)
263 3o3u_N Maltose-binding peripla 99.7 2.6E-17 8.9E-22 148.6 15.8 169 74-252 375-565 (581)
264 3mlr_H Human monoclonal anti-H 99.7 5.7E-17 1.9E-21 128.3 15.1 182 71-257 6-219 (226)
265 3sob_H Antibody heavy chain, l 99.7 6.6E-17 2.2E-21 130.5 15.6 187 71-262 29-249 (256)
266 3p2t_A Leukocyte immunoglobuli 99.7 9.5E-18 3.2E-22 129.8 10.2 148 163-321 4-196 (196)
267 2cqv_A MLCK, myosin light chai 99.7 9.4E-17 3.2E-21 112.7 14.4 98 63-160 5-102 (114)
268 3b5h_A Cervical EMMPRIN, HAB18 99.7 2.4E-17 8.1E-22 126.1 12.1 142 12-156 31-182 (184)
269 2v44_A NCAM2, neural cell adhe 99.7 2.3E-16 8E-21 121.1 17.6 143 168-319 6-185 (189)
270 3mtr_A N-CAM-1, NCAM-1, neural 99.7 6.8E-17 2.3E-21 126.9 14.5 154 164-324 19-212 (215)
271 1mq8_A ICAM-1, intercellular a 99.7 7.5E-19 2.6E-23 143.0 3.2 247 2-270 10-288 (291)
272 3iu4_H CHP3 FAB heavy chain; a 99.7 4.6E-17 1.6E-21 131.7 13.4 186 71-261 6-221 (263)
273 2aty_A Complement receptor chi 99.7 7.6E-17 2.6E-21 137.4 15.5 181 69-252 171-361 (376)
274 2x1w_L Vascular endothelial gr 99.7 1.2E-17 4.1E-22 131.0 9.7 128 32-159 63-209 (213)
275 2c1o_A IGK-C protein; FAB frag 99.7 1.3E-17 4.5E-22 134.4 10.2 112 128-252 11-137 (254)
276 1fnl_A Low affinity immunoglob 99.7 7.1E-17 2.4E-21 122.5 13.6 141 163-322 6-175 (175)
277 1f2q_A High affinity immunoglo 99.7 1.4E-17 4.6E-22 126.6 9.6 142 164-324 4-174 (176)
278 4f80_A Butyrophilin subfamily 99.7 1.2E-16 4E-21 126.5 15.4 151 172-322 12-214 (226)
279 3k0w_A Mucosa-associated lymph 99.7 8.5E-17 2.9E-21 126.6 14.4 144 164-324 18-205 (218)
280 2ifg_A High affinity nerve gro 99.7 1.6E-17 5.6E-22 140.2 10.9 172 132-323 136-347 (347)
281 3qp3_A Titin; I-SET IG-like, s 99.7 2E-16 6.8E-21 108.8 14.2 98 61-158 4-101 (103)
282 3knb_A Titin; IG-like, titin, 99.7 1.1E-16 3.9E-21 109.1 12.1 94 164-263 5-98 (100)
283 3knb_B Obscurin-like protein 1 99.7 9.9E-17 3.4E-21 110.8 11.8 93 164-264 13-105 (107)
284 3jz7_A MCAR, CAR, coxsackievir 99.7 7.2E-17 2.5E-21 126.3 12.2 151 172-323 8-214 (214)
285 1mq8_A ICAM-1, intercellular a 99.7 1.8E-16 6.2E-21 129.0 14.7 161 68-252 2-166 (291)
286 3shs_A HOC head outer capsid p 99.7 3.1E-15 1.1E-19 116.4 20.3 156 66-252 3-169 (304)
287 1ugn_A LIR1, leukocyte immunog 99.7 5.3E-17 1.8E-21 125.8 10.3 148 163-321 4-198 (198)
288 3ry4_A Low affinity immunoglob 99.7 3.5E-16 1.2E-20 118.0 13.9 138 164-320 4-170 (170)
289 3puc_A Titin; I-SET IG-like do 99.7 6.3E-16 2.2E-20 105.5 13.8 95 63-157 4-98 (99)
290 1g1c_A Immunoglobulin-like dom 99.7 7.5E-16 2.6E-20 105.1 14.2 94 64-157 4-98 (99)
291 3bp6_B Programmed cell death 1 99.7 3.7E-16 1.3E-20 121.4 14.0 148 172-322 10-194 (202)
292 3r4d_A CEA-related cell adhesi 99.7 4.2E-16 1.4E-20 121.5 14.3 141 172-323 7-202 (208)
293 1ypz_E T cell receptor delta, 99.7 4.1E-16 1.4E-20 121.5 14.0 169 68-254 4-199 (207)
294 3irg_B Obscurin-like protein 1 99.7 5.2E-16 1.8E-20 107.5 13.1 98 61-158 9-106 (107)
295 1ow0_A IG alpha-1 chain C regi 99.7 4.9E-18 1.7E-22 133.3 2.1 184 65-253 3-200 (214)
296 2v5y_A Receptor-type tyrosine- 99.7 2.3E-15 7.9E-20 139.4 20.2 221 79-319 90-352 (731)
297 4i0k_A CD276 antigen; immunogl 99.7 2.4E-16 8.2E-21 124.3 11.3 127 32-159 71-208 (222)
298 1vca_A VCAM-D1,2, human vascul 99.7 1.9E-15 6.6E-20 117.3 16.2 139 175-324 12-200 (202)
299 1u2h_A APEG-1, aortic preferen 99.7 1.3E-15 4.6E-20 103.8 13.0 94 64-157 4-98 (99)
300 2ny1_B T-cell surface glycopro 99.7 5.4E-17 1.9E-21 124.2 6.4 115 32-159 67-181 (184)
301 1nbq_A JAM, junctional adhesio 99.7 9.1E-18 3.1E-22 131.0 1.7 115 33-147 68-197 (209)
302 1jbj_A CD3 epsilon and gamma e 99.7 3.5E-17 1.2E-21 125.4 4.9 120 13-147 29-179 (186)
303 3u1s_H FAB PGT145 heavy chain; 99.7 1.3E-15 4.4E-20 123.6 14.1 185 72-261 30-262 (267)
304 2yuz_A Myosin-binding protein 99.7 4.7E-16 1.6E-20 106.0 9.7 93 63-159 5-97 (100)
305 1wit_A Twitchin 18TH IGSF modu 99.7 9.9E-16 3.4E-20 103.2 11.0 89 65-155 2-92 (93)
306 3mj6_A Junctional adhesion mol 99.7 4.6E-16 1.6E-20 126.3 10.8 152 167-320 8-236 (268)
307 1oll_A NK receptor; immune sys 99.7 7.9E-16 2.7E-20 118.1 11.5 147 164-321 4-188 (188)
308 3irg_A Titin; IG-like, titin, 99.7 2.4E-15 8.3E-20 102.7 12.7 93 64-156 4-98 (100)
309 2kdg_A Myotilin; immonoglobuli 99.7 1.2E-15 4E-20 104.3 11.1 95 64-158 4-99 (100)
310 1iam_A ICAM-1, CD54, intercell 99.7 1.5E-14 5.1E-19 109.0 17.5 162 68-252 2-166 (185)
311 1waa_A Titin; metal binding pr 99.6 2.3E-15 7.9E-20 101.0 11.8 89 64-157 4-92 (93)
312 1nct_A Titin; cell adhesion, g 99.6 5E-16 1.7E-20 107.3 8.7 97 60-156 9-105 (106)
313 2e7c_A Myosin-binding protein 99.6 5.3E-15 1.8E-19 104.3 14.1 96 62-158 18-116 (118)
314 2bk8_A Connectin, M1, titin he 99.6 6.2E-15 2.1E-19 100.1 13.9 91 67-157 3-94 (97)
315 2kkq_A Myotilin; unknown funct 99.6 3.6E-15 1.2E-19 104.7 12.7 100 60-159 10-111 (116)
316 2d3v_A Leukocyte immunoglobuli 99.6 1E-16 3.5E-21 123.9 5.2 132 12-145 34-180 (196)
317 1fhg_A Telokin; immunoglobulin 99.6 7E-15 2.4E-19 108.9 14.5 101 60-160 36-137 (154)
318 3sbw_C Programmed cell death 1 99.6 2.3E-16 8E-21 124.3 6.9 126 33-158 80-212 (222)
319 1hng_A CD2; T lymphocyte adhes 99.6 9.2E-16 3.2E-20 116.3 9.9 138 174-320 6-175 (176)
320 1nqb_A Single-chain antibody f 99.6 4.6E-16 1.6E-20 125.5 8.5 125 33-157 79-233 (256)
321 1uct_A Immunoglobulin alpha FC 99.6 2E-16 6.9E-21 124.3 6.2 129 11-144 37-180 (218)
322 2gi7_A GPVI protein; IG-like d 99.6 1.5E-15 5.3E-20 116.0 10.8 127 163-309 7-168 (184)
323 3uzq_A Anti-dengue MAB 4E11; d 99.6 2.3E-16 7.8E-21 127.1 6.2 125 34-158 81-245 (253)
324 3f8u_B Tapasin; endoplasmic re 99.6 5.3E-14 1.8E-18 117.8 20.4 176 70-251 163-388 (401)
325 2yr3_A Myosin light chain kina 99.6 3.5E-15 1.2E-19 101.7 11.1 94 59-155 5-98 (99)
326 2dm2_A Palladin; beta-sandwich 99.6 2.8E-15 9.7E-20 104.3 10.8 97 63-159 6-104 (110)
327 2fbo_J V1V2;, variable region- 99.6 6E-16 2E-20 124.2 8.2 121 33-154 90-249 (250)
328 1f3r_B FV antibody fragment; I 99.6 3.6E-16 1.2E-20 126.2 6.9 125 33-157 78-245 (257)
329 2eo9_A Roundabout homolog 1; b 99.6 2.9E-15 1E-19 105.6 9.9 94 63-159 6-100 (118)
330 2p1y_A Bispecific alpha/beta T 99.6 8.4E-16 2.9E-20 122.5 8.0 112 32-143 72-221 (238)
331 1sy6_A T-cell surface glycopro 99.6 7.3E-17 2.5E-21 125.5 1.6 135 12-155 31-202 (204)
332 2edj_A Roundabout homolog 2; K 99.6 4E-15 1.4E-19 101.6 10.0 93 63-158 6-99 (100)
333 1hxm_A Gamma-delta T-cell rece 99.6 1.1E-14 3.6E-19 115.1 13.8 168 68-252 4-198 (229)
334 2cqv_A MLCK, myosin light chai 99.6 1.4E-14 4.8E-19 101.4 12.8 98 163-268 6-103 (114)
335 3umt_A SCFV heavy chain and li 99.6 6.7E-16 2.3E-20 124.6 6.8 125 34-158 82-246 (256)
336 1g1c_A Immunoglobulin-like dom 99.6 2E-14 6.9E-19 97.9 13.3 93 164-263 5-97 (99)
337 2ghw_B Anti-SARS SCFV antibody 99.6 1.4E-15 4.8E-20 121.9 8.6 124 33-156 81-241 (247)
338 4frw_A Poliovirus receptor-rel 99.6 8E-16 2.8E-20 120.5 6.9 124 32-155 78-209 (218)
339 2v5y_A Receptor-type tyrosine- 99.6 2.8E-14 9.6E-19 132.1 18.1 285 12-320 107-456 (731)
340 2dm3_A KIAA0992 protein, palla 99.6 4E-15 1.4E-19 103.5 9.3 97 63-159 7-104 (110)
341 2lvc_A Obscurin-like protein 1 99.6 3.4E-15 1.2E-19 99.5 8.4 78 65-143 4-83 (91)
342 2ckn_A Basic fibroblast growth 99.6 7.2E-15 2.5E-19 99.3 10.1 87 64-155 8-94 (95)
343 2pet_A Lutheran blood group gl 99.6 1.3E-15 4.5E-20 120.7 7.4 111 33-143 77-211 (231)
344 2lu7_A Obscurin-like protein 1 99.6 4.5E-15 1.5E-19 97.3 8.5 81 72-157 3-83 (84)
345 4fmk_A Poliovirus receptor-rel 99.6 1.1E-14 3.9E-19 114.5 12.4 149 173-321 10-219 (225)
346 2kdg_A Myotilin; immonoglobuli 99.6 2.2E-14 7.6E-19 97.9 12.2 94 164-264 5-98 (100)
347 1dr9_A B7-1 (CD80), T lymphocy 99.6 2.3E-15 8E-20 116.7 8.0 118 31-152 63-196 (201)
348 1p6f_A NKP46, natural cytotoxi 99.6 1.1E-14 3.7E-19 116.1 12.0 149 163-322 6-192 (242)
349 1gxe_A Myosin binding protein 99.6 6.5E-15 2.2E-19 106.3 9.6 85 72-156 25-138 (139)
350 3mj8_L Stimulatory hamster ant 99.6 4.3E-16 1.5E-20 122.0 3.7 119 33-151 70-207 (213)
351 2edf_A Obscurin; beta-sandwich 99.6 1.2E-14 4.1E-19 99.8 10.5 92 63-159 6-97 (103)
352 3juy_B 3B3 single chain varian 99.6 2.8E-15 9.7E-20 120.9 8.3 111 34-144 86-243 (256)
353 3gkz_A Anti-methamphetamine si 99.6 1.7E-15 5.9E-20 122.2 7.0 124 34-157 87-249 (257)
354 3kvq_A Vascular endothelial gr 99.6 6.2E-15 2.1E-19 102.2 8.8 96 61-158 6-101 (108)
355 1he7_A High affinity nerve gro 99.6 3.4E-14 1.2E-18 99.7 12.3 82 79-160 14-102 (126)
356 3qp3_A Titin; I-SET IG-like, s 99.6 3.6E-14 1.2E-18 97.4 12.4 92 164-263 8-99 (103)
357 2yuv_A Myosin-binding protein 99.6 3.5E-14 1.2E-18 96.9 11.9 90 64-158 6-96 (100)
358 2kkq_A Myotilin; unknown funct 99.6 3.1E-14 1.1E-18 99.9 11.3 101 163-269 14-114 (116)
359 1u2h_A APEG-1, aortic preferen 99.6 5.5E-14 1.9E-18 95.7 12.2 93 164-263 5-97 (99)
360 3eow_R Poliovirus receptor; im 99.6 4.8E-15 1.6E-19 116.7 7.8 121 31-152 76-207 (221)
361 1x44_A Myosin-binding protein 99.6 2.7E-14 9.2E-19 98.0 10.5 89 65-158 7-97 (103)
362 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 1.3E-13 4.6E-18 111.0 16.2 81 166-252 5-100 (256)
363 2eny_A Obscurin; beta-sandwich 99.6 1.2E-14 4.1E-19 99.8 8.4 92 64-159 7-99 (104)
364 1qok_A MFE-23 recombinant anti 99.6 6.5E-15 2.2E-19 120.5 8.1 124 33-157 105-268 (282)
365 3puc_A Titin; I-SET IG-like do 99.6 7.9E-14 2.7E-18 94.9 12.2 92 164-263 6-97 (99)
366 2k1m_A Myosin-binding protein 99.6 3.8E-14 1.3E-18 95.7 10.5 88 64-156 7-94 (95)
367 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.1E-14 3.7E-19 102.3 7.8 92 66-157 8-111 (126)
368 3tv3_L PGT128 light chain, IG 99.6 1.6E-15 5.4E-20 118.6 4.0 119 33-151 68-205 (211)
369 3cx2_A Myosin-binding protein 99.6 4.7E-14 1.6E-18 97.7 11.0 93 64-156 3-107 (108)
370 1lk3_L 9D7 light chain; antige 99.6 1.7E-15 5.7E-20 118.4 4.0 112 34-145 71-200 (210)
371 2dlt_A Myosin binding protein 99.6 1.3E-14 4.3E-19 100.3 7.9 92 63-157 6-97 (106)
372 1wwb_X Protein (brain derived 99.6 5.8E-14 2E-18 96.2 11.2 93 64-159 3-100 (103)
373 3irg_A Titin; IG-like, titin, 99.5 8.9E-14 3E-18 94.8 12.1 94 164-263 5-98 (100)
374 1nkr_A P58-CL42 KIR; inhibitor 99.5 4.3E-15 1.5E-19 115.2 5.9 129 12-144 37-184 (201)
375 2e6p_A Obscurin-like protein 1 99.5 2.4E-14 8.3E-19 98.4 9.1 91 64-159 6-99 (104)
376 2cpc_A KIAA0657 protein; immun 99.5 1.1E-13 3.8E-18 96.6 12.7 95 61-160 6-103 (113)
377 3irg_B Obscurin-like protein 1 99.5 8E-14 2.7E-18 96.3 11.8 93 164-264 13-105 (107)
378 2e6q_A Obscurin-like protein 1 99.5 1.7E-13 6E-18 94.4 13.3 93 62-159 5-107 (112)
379 3d9a_L Light chain of hyhel10 99.5 1E-15 3.5E-20 119.8 2.3 113 34-146 72-202 (213)
380 3bn3_B ICAM-5, intercellular a 99.5 2.7E-13 9.3E-18 102.9 15.4 171 65-252 2-174 (196)
381 3nl4_L Antigen binding fragmen 99.5 5.5E-15 1.9E-19 115.6 6.3 108 34-141 72-198 (213)
382 1wit_A Twitchin 18TH IGSF modu 99.5 3E-14 1E-18 95.8 9.0 89 164-262 2-92 (93)
383 2edh_A Obscurin; structural ge 99.5 1.6E-13 5.4E-18 95.9 12.9 90 64-159 18-107 (113)
384 3s96_B 3B5H10 FAB light chain; 99.5 2.5E-15 8.7E-20 118.0 4.0 118 33-150 75-213 (218)
385 2dm2_A Palladin; beta-sandwich 99.5 4.8E-14 1.6E-18 98.0 10.1 99 163-267 7-105 (110)
386 2edk_A Myosin-binding protein 99.5 8.5E-15 2.9E-19 100.2 6.0 90 63-157 6-99 (101)
387 2cr6_A KIAA1556 protein, obscu 99.5 2E-14 6.8E-19 100.8 7.9 94 64-161 12-106 (115)
388 1q0x_L FAB 9B1, light chain; a 99.5 5.8E-15 2E-19 115.5 5.5 116 34-149 74-207 (212)
389 2gki_A Nuclease; anti-DNA anti 99.5 1.3E-14 4.6E-19 119.2 7.6 126 33-158 101-273 (291)
390 3caf_A Fibroblast growth facto 99.5 1.9E-14 6.4E-19 98.3 7.1 89 65-155 4-99 (100)
391 1b6u_A KIR2DL3, P58 killer cel 99.5 2.9E-13 9.8E-18 108.8 15.2 151 163-324 6-204 (257)
392 2e7c_A Myosin-binding protein 99.5 3.1E-13 1.1E-17 95.1 13.5 86 172-266 32-117 (118)
393 2yr3_A Myosin light chain kina 99.5 4.1E-14 1.4E-18 96.4 8.6 88 164-262 11-98 (99)
394 3pv7_A B7-H6, IG-like domain-c 99.5 8.2E-14 2.8E-18 111.7 11.7 149 173-322 12-227 (248)
395 2dav_A SLOW MYBP-C, myosin-bin 99.5 2.2E-13 7.7E-18 95.6 12.4 98 165-264 8-111 (126)
396 3bfo_A Mucosa-associated lymph 99.5 1.5E-13 5.2E-18 91.9 11.2 84 64-156 2-86 (91)
397 2edn_A Myosin-binding protein 99.5 5.5E-14 1.9E-18 97.6 9.0 95 64-158 11-117 (118)
398 2e7b_A Obscurin; IG-like domai 99.5 4.4E-14 1.5E-18 96.9 8.6 91 63-158 6-96 (103)
399 2edj_A Roundabout homolog 2; K 99.5 1.2E-13 4.2E-18 94.1 10.7 92 163-264 7-98 (100)
400 3fku_X Neutralizing antibody F 99.5 1.7E-14 5.8E-19 117.8 7.4 110 34-144 80-234 (280)
401 2xzc_L FAB A.17 light chain; i 99.5 3.9E-15 1.3E-19 116.8 3.5 113 34-146 73-204 (216)
402 2yuz_A Myosin-binding protein 99.5 6.7E-14 2.3E-18 95.2 9.0 90 164-265 7-96 (100)
403 2dku_A KIAA1556 protein; beta- 99.5 1.2E-13 4.1E-18 94.8 10.3 91 64-159 7-97 (103)
404 1fhg_A Telokin; immunoglobulin 99.5 2.8E-13 9.5E-18 100.2 12.8 97 163-266 40-136 (154)
405 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 8.6E-15 3E-19 115.4 4.9 116 33-149 81-215 (222)
406 2bk8_A Connectin, M1, titin he 99.5 3.7E-13 1.3E-17 91.2 12.4 86 169-262 6-92 (97)
407 1nfd_E H57 FAB; complex (immun 99.5 7.1E-16 2.4E-20 120.7 -1.4 113 34-146 70-201 (212)
408 3esu_F Antibody 14B7* light ch 99.5 1.2E-14 4.2E-19 116.6 5.8 109 34-142 75-231 (250)
409 1hnf_A CD2; T lymphocyte adhes 99.5 1.1E-13 3.9E-18 105.0 10.7 141 173-321 8-181 (182)
410 3d9a_H Heavy chain of hyhel10 99.5 7.6E-15 2.6E-19 114.6 4.2 114 34-148 79-205 (210)
411 2dm3_A KIAA0992 protein, palla 99.5 3.1E-14 1.1E-18 99.0 6.7 98 163-267 8-105 (110)
412 1pd6_A Cardiac MYBP-C;, myosin 99.5 1.3E-13 4.3E-18 94.6 9.7 78 62-140 12-91 (104)
413 1waa_A Titin; metal binding pr 99.5 2.3E-13 7.8E-18 91.2 10.6 88 163-263 4-91 (93)
414 2zg1_A Sialic acid-binding IG- 99.5 1.2E-14 4.1E-19 113.8 5.0 105 33-146 82-202 (214)
415 1c1e_H Catalytic antibody 1E9 99.5 8.3E-15 2.8E-19 115.2 4.1 116 33-149 79-212 (219)
416 1dee_B IGM RF 2A2; FAB-IBP com 99.5 5.4E-14 1.8E-18 110.9 8.8 118 33-150 79-220 (223)
417 3ux9_B SCFV antibody; five hel 99.5 3.5E-14 1.2E-18 114.4 7.8 111 34-144 75-236 (256)
418 1nct_A Titin; cell adhesion, g 99.5 5.4E-14 1.8E-18 97.0 7.5 92 163-262 13-104 (106)
419 3r06_A Anti-mouse CD3epsilon a 99.5 9.1E-15 3.1E-19 114.4 4.0 112 34-145 72-201 (213)
420 2v9t_A Roundabout homolog 1; s 99.5 1.4E-13 4.7E-18 96.8 9.7 97 61-157 5-109 (117)
421 2dm7_A KIAA1556 protein; beta- 99.5 1.9E-13 6.5E-18 94.6 10.3 90 63-158 6-95 (108)
422 2j6e_L IGM, FAB light chain; a 99.5 5.1E-15 1.7E-19 117.6 2.6 114 34-147 92-225 (234)
423 2znx_A SCFV; fluorotryptohpan, 99.5 1.7E-14 5.8E-19 115.3 5.6 110 33-142 71-221 (242)
424 3sob_L Antibody light chain; b 99.5 8.3E-15 2.8E-19 116.6 3.6 114 33-146 94-225 (237)
425 2if7_A SLAM family member 6; N 99.5 4.7E-14 1.6E-18 108.6 7.6 106 32-150 69-185 (193)
426 1moe_A Anti-CEA MAB T84.66; an 99.5 4E-14 1.4E-18 112.9 7.3 109 34-142 76-219 (240)
427 1svz_A Immunoglobulin;, single 99.5 3.9E-14 1.3E-18 113.5 7.2 110 34-143 77-228 (247)
428 3kvq_A Vascular endothelial gr 99.5 6E-14 2.1E-18 97.2 7.0 93 164-266 10-102 (108)
429 1pz5_B Heavy chain of FAB (SYA 99.5 1.8E-14 6.2E-19 113.3 4.8 115 34-151 82-215 (220)
430 3cx2_A Myosin-binding protein 99.5 1.3E-12 4.4E-17 90.3 13.5 100 164-263 4-107 (108)
431 3m45_A Cell adhesion molecule 99.5 2.7E-13 9.3E-18 93.8 10.0 95 63-158 4-107 (108)
432 4f9l_D 20.1 anti-BTN3A1 antibo 99.5 1E-12 3.6E-17 101.4 13.9 181 68-248 4-230 (259)
433 1wwc_A Protein (NT-3 growth fa 99.5 4.3E-13 1.5E-17 94.4 10.9 96 61-159 4-103 (118)
434 2cr3_A Basic fibroblast growth 99.5 1.5E-13 5E-18 93.5 8.1 83 71-158 9-91 (99)
435 2edn_A Myosin-binding protein 99.5 4E-13 1.4E-17 93.2 10.3 99 164-264 12-116 (118)
436 1mju_H Immunoglobulin MS6-12; 99.5 2.4E-14 8.3E-19 113.2 4.5 122 33-157 79-217 (227)
437 3auv_A SC-DSFV derived from th 99.5 7.8E-14 2.7E-18 113.7 7.5 110 34-143 83-235 (276)
438 3so5_A LIG-3, leucine-rich rep 99.5 1.1E-12 3.9E-17 91.1 12.2 93 63-155 8-111 (112)
439 2fbj_H IGA-kappa J539 FAB (hea 99.5 8.2E-14 2.8E-18 109.6 6.5 114 33-147 79-211 (220)
440 2eo9_A Roundabout homolog 1; b 99.4 3.1E-13 1.1E-17 95.1 8.6 95 163-267 7-101 (118)
441 2cry_A KIN of IRRE-like protei 99.4 4.9E-14 1.7E-18 99.9 4.4 99 59-158 8-114 (122)
442 2lu7_A Obscurin-like protein 1 99.4 2.5E-13 8.4E-18 89.0 7.4 78 172-262 4-81 (84)
443 3s35_X Vascular endothelial gr 99.4 1.2E-12 4.2E-17 92.6 11.5 92 69-160 11-113 (122)
444 3bfo_A Mucosa-associated lymph 99.4 1.6E-12 5.6E-17 86.8 11.4 82 164-262 3-85 (91)
445 3bqu_C 3H6 FAB light chain; be 99.4 6E-14 2E-18 111.3 5.1 112 34-145 94-223 (233)
446 3caf_A Fibroblast growth facto 99.4 3.6E-13 1.2E-17 91.8 7.9 83 173-262 17-99 (100)
447 1dn0_B IGM-kappa cold agglutin 99.4 2.8E-13 9.5E-18 107.4 8.5 122 34-155 79-225 (232)
448 2lvc_A Obscurin-like protein 1 99.4 4.4E-13 1.5E-17 89.2 8.1 73 176-261 18-90 (91)
449 2ckn_A Basic fibroblast growth 99.4 7.4E-13 2.5E-17 89.3 9.3 87 163-262 8-94 (95)
450 1gl4_B Basement membrane-speci 99.4 9E-13 3.1E-17 89.4 9.8 88 64-156 8-97 (98)
451 1wwb_X Protein (brain derived 99.4 1.3E-12 4.4E-17 89.5 10.6 87 177-266 14-100 (103)
452 3bae_H WO2 IGG2A FAB fragment 99.4 8.6E-14 2.9E-18 110.1 5.2 116 33-149 80-218 (228)
453 1ccz_A Protein (CD58); LFA-3, 99.4 1.2E-13 4.1E-18 104.0 5.8 136 173-319 4-169 (171)
454 1gxe_A Myosin binding protein 99.4 4.6E-13 1.6E-17 96.6 8.4 83 172-262 26-137 (139)
455 1x44_A Myosin-binding protein 99.4 9.9E-13 3.4E-17 90.1 9.8 92 165-267 8-99 (103)
456 3bkj_L WO2 IGG2A FAB fragment 99.4 2.1E-14 7.3E-19 115.4 1.4 113 34-146 110-240 (252)
457 2gjj_A A21 single-chain antibo 99.4 2.1E-13 7.3E-18 110.3 7.2 111 33-143 81-239 (264)
458 1he7_A High affinity nerve gro 99.4 1.1E-12 3.8E-17 91.9 9.7 88 178-267 14-102 (126)
459 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 2.2E-13 7.5E-18 110.5 7.1 110 34-143 91-254 (268)
460 1ntl_A CRRY-IG; immunology, co 99.4 6.4E-12 2.2E-16 112.2 16.9 171 77-252 355-536 (551)
461 3omz_A Human vdelta1 gamma del 99.4 7.2E-14 2.4E-18 112.8 3.9 111 32-142 78-230 (259)
462 4hwu_A Fibroblast growth facto 99.4 1E-12 3.4E-17 88.6 8.9 83 70-158 6-88 (95)
463 2dru_A Chimera of CD48 antigen 99.4 4.1E-14 1.4E-18 107.5 2.2 102 30-151 66-175 (180)
464 2eny_A Obscurin; beta-sandwich 99.4 7.9E-13 2.7E-17 90.7 8.4 92 164-266 8-99 (104)
465 2xot_A Amphoterin-induced prot 99.4 9.3E-13 3.2E-17 111.5 10.6 104 71-198 252-359 (361)
466 1zxq_A ICAM-2, intercellular a 99.4 1.7E-11 6E-16 92.0 16.1 167 66-251 3-172 (192)
467 3m8o_H Immunoglobulin A1 heavy 99.4 3.7E-13 1.3E-17 105.9 7.2 106 34-146 82-212 (221)
468 3qr2_A Basigin; CD147, EMMPRIN 99.4 2.9E-12 9.8E-17 92.7 11.4 88 60-147 16-116 (137)
469 2vol_A Murine IGG FC; FC, zinc 99.4 1.3E-13 4.5E-18 107.3 4.5 135 11-145 37-196 (207)
470 2k1m_A Myosin-binding protein 99.4 5.3E-12 1.8E-16 85.0 11.7 85 165-262 9-93 (95)
471 1op3_H FAB 2G12, heavy chain; 99.4 7.3E-14 2.5E-18 110.3 2.8 113 33-146 79-214 (225)
472 3so5_A LIG-3, leucine-rich rep 99.4 3.9E-12 1.3E-16 88.4 11.1 100 163-262 9-111 (112)
473 2ens_A Advanced glycosylation 99.4 2.9E-13 1E-17 91.5 5.1 83 64-155 9-93 (96)
474 3liz_H 4C3 monoclonal antibody 99.4 2.1E-13 7.2E-18 109.6 5.1 120 34-154 80-217 (253)
475 2edf_A Obscurin; beta-sandwich 99.4 9.6E-13 3.3E-17 90.2 7.7 92 163-267 7-98 (103)
476 2eo1_A OBSCN protein, cDNA FLJ 99.4 1.5E-12 5.1E-17 89.0 8.5 80 74-158 20-99 (102)
477 3s35_X Vascular endothelial gr 99.4 9.1E-12 3.1E-16 88.1 12.9 93 173-267 17-113 (122)
478 3rbg_A Cytotoxic and regulator 99.4 3.4E-12 1.2E-16 90.5 10.6 91 68-159 4-103 (124)
479 3nl4_H Antigen binding fragmen 99.4 6.7E-14 2.3E-18 109.7 1.5 118 34-152 76-209 (215)
480 2rgs_A I, IG gamma-2B heavy ch 99.4 1E-13 3.5E-18 108.8 2.5 135 11-145 45-204 (218)
481 2dlt_A Myosin binding protein 99.4 1.5E-12 5E-17 89.7 7.9 90 163-263 7-96 (106)
482 4dzb_B Vbeta2 (MAIT T cell rec 99.4 1.7E-13 5.9E-18 109.6 3.6 114 33-146 77-220 (246)
483 2yuv_A Myosin-binding protein 99.4 4.5E-12 1.5E-16 86.3 10.0 87 164-263 7-94 (100)
484 2e6p_A Obscurin-like protein 1 99.4 2.6E-12 9E-17 88.1 8.6 90 164-266 7-99 (104)
485 1c5d_H Monoclonal antibody aga 99.4 5.3E-13 1.8E-17 104.5 5.4 114 33-148 78-207 (215)
486 2edh_A Obscurin; structural ge 99.4 3.3E-12 1.1E-16 89.1 8.6 99 149-266 9-107 (113)
487 2cry_A KIN of IRRE-like protei 99.3 5.5E-14 1.9E-18 99.6 -0.9 93 165-262 15-111 (122)
488 2eys_A NKT15; natural killer T 99.3 1.8E-11 6.2E-16 95.0 13.0 163 67-252 5-188 (210)
489 2ens_A Advanced glycosylation 99.3 1.3E-12 4.5E-17 88.2 5.6 83 163-262 9-91 (96)
490 3q5y_A TCR N15 beta; IG, T cel 99.3 3.4E-13 1.2E-17 107.5 3.1 114 32-145 74-212 (240)
491 3m45_A Cell adhesion molecule 99.3 1.4E-11 4.8E-16 85.0 10.8 95 164-264 6-106 (108)
492 1pd6_A Cardiac MYBP-C;, myosin 99.3 1.4E-11 4.8E-16 84.3 10.6 87 163-262 14-102 (104)
493 2xqy_G A13-D6.3 monoclonal ant 99.3 8.4E-13 2.9E-17 106.5 5.1 113 33-146 85-214 (261)
494 3qhz_H Human monoclonal antibo 99.3 5.4E-13 1.9E-17 105.8 3.9 121 34-155 84-227 (232)
495 2edk_A Myosin-binding protein 99.3 1.7E-12 5.8E-17 88.6 5.8 89 164-263 8-98 (101)
496 1wwc_A Protein (NT-3 growth fa 99.3 6.1E-12 2.1E-16 88.4 8.7 81 180-264 21-101 (118)
497 2e6q_A Obscurin-like protein 1 99.3 1.6E-11 5.6E-16 84.5 10.6 91 164-265 8-106 (112)
498 1z9m_A GAPA225; nectin-like, I 99.3 1.1E-11 3.8E-16 90.5 10.3 92 66-159 39-140 (145)
499 3pl6_D MBP peptide / T-cell re 99.3 4.2E-13 1.4E-17 108.8 2.9 114 32-145 99-240 (268)
500 3uto_A Twitchin; kinase, muscl 99.3 2.6E-11 8.7E-16 108.4 14.6 92 64-155 481-572 (573)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=8.6e-41 Score=301.07 Aligned_cols=304 Identities=22% Similarity=0.310 Sum_probs=237.2
Q ss_pred eeeecccCCCCcccCCC----CCCCCCCCCCcccCCCCCCCcccccccccccc-----ccc---CCCCeeEecCCceEec
Q psy1095 11 LSVKLTRPSGLMSGHST----PRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRL---TSSPRFYAVPHNKICD 78 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~----~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~---~~~p~~~~~~~~~~v~ 78 (325)
..++|.+++..+..... ......+|.|.+++.+|+|.|+|.+.|..+.. ..+ ..+|.+...+.+..+.
T Consensus 35 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~ 114 (570)
T 3b43_A 35 IRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHET 114 (570)
T ss_dssp CEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCCCCEESSCCCCEEEE
T ss_pred CEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCCCCcccccCCCeEec
Confidence 35788888877654322 11223568899999999999999998865432 111 2477777777788888
Q ss_pred CCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 79 LGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 79 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
+|+++.|.|.+.|.|.+.++|+|++..+....++..........|.|.++..+|+|.|+|.+.|..|.......+.|...
T Consensus 115 ~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 194 (570)
T 3b43_A 115 LGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH 194 (570)
T ss_dssp TTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCC
Confidence 99999999999999999999999999998777766555556678999999999999999999999998877777777653
Q ss_pred CcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCC
Q psy1095 159 RAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPE 238 (325)
Q Consensus 159 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 238 (325)
..+|.+...+....+.+|+.+.|.|.+.|.|+ +.+.|++++..+..+...... ..+ ....|.|.+++.+
T Consensus 195 ---~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~--p~i~W~k~g~~i~~~~~~~~~--~~~----~~~~L~i~~v~~~ 263 (570)
T 3b43_A 195 ---EVPPFFDLKPVSVDLALGESGTFKCHVTGTAP--IKITWAKDNREIRPGGNYKMT--LVE----NTATLTVLKVTKG 263 (570)
T ss_dssp ---CCCCEEEECCCCBCCBSBSCEEEEEEEESSSC--CEEEEEETTEECCTTSSEEEE--EET----TEEEEEESSBCGG
T ss_pred ---CCCCccccCCceeEecCCCeEEEEEEEEECCC--CEEEEEECCEECcCCCcEEEE--EEC----CEEEEEEcccCcc
Confidence 23466666666777889999999999999887 899999999988765544333 211 2368999999999
Q ss_pred CCeEEEEEEEeCCCcEEeEEEEEEEe-------------------------------------eCCeecCCCCceEEEEe
Q psy1095 239 DEGEFTCRVANELGEVVTSACLIVDV-------------------------------------VKGKDLTSDGRLNIITV 281 (325)
Q Consensus 239 d~G~Y~C~~~~~~~~~~~~~~l~v~~-------------------------------------~~~~~~~~~~~~~~~~~ 281 (325)
|+|.|+|.|.|..|.....+.|.|.. +.+..+..+.+......
T Consensus 264 D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~ 343 (570)
T 3b43_A 264 DAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV 343 (570)
T ss_dssp GCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEE
T ss_pred cCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEE
Confidence 99999999999998877766665532 22222223333344445
Q ss_pred CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccCC
Q psy1095 282 GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKII 325 (325)
Q Consensus 282 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~i 325 (325)
+....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.|
T Consensus 344 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~ 387 (570)
T 3b43_A 344 ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF 387 (570)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEE
T ss_pred CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCee
Confidence 55678999999999999999999999999999999999988853
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.1e-40 Score=300.30 Aligned_cols=301 Identities=23% Similarity=0.371 Sum_probs=236.8
Q ss_pred eeeecccCCCCcccCCCC----CCCCCCCCCcccCCCCCCCcccccccccccc-----cc---cCCCCeeEecCCceEec
Q psy1095 11 LSVKLTRPSGLMSGHSTP----RSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RR---LTSSPRFYAVPHNKICD 78 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~----~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~---~~~~p~~~~~~~~~~v~ 78 (325)
+.++|.+++..+...... .....+|.|.+++.+|+|.|+|.+.|..+.. .. ...||.+...|....+.
T Consensus 131 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~ 210 (570)
T 3b43_A 131 LQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLA 210 (570)
T ss_dssp CEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCB
T ss_pred CEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEec
Confidence 467888887766543221 1123568899999999999999998765432 11 23578888888888899
Q ss_pred CCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 79 LGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 79 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
+|+++.|.|.+.|.|.+.++|+|++..+....++.+........|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+
T Consensus 211 ~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~ 290 (570)
T 3b43_A 211 LGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEP 290 (570)
T ss_dssp SBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCC
T ss_pred CCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecC
Confidence 99999999999999999999999999998877777766666678999999999999999999999998888888887664
Q ss_pred CcccCCCeeeecCc-CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCC
Q psy1095 159 RAIISRPKVLNGLE-NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYP 237 (325)
Q Consensus 159 ~~~~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 237 (325)
|.+..... ...+.+|+.+.|.|.+.|.|. +.+.|++++..+......... ..+ ....|.|.+++.
T Consensus 291 ------p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~--p~v~W~k~~~~l~~~~~~~~~--~~~----~~~~L~i~~v~~ 356 (570)
T 3b43_A 291 ------PRFIKKLEPSRIVKQDEHTRYECKIGGSPE--IKVLWYKDETEIQESSKFRMS--FVE----SVAVLEMYNLSV 356 (570)
T ss_dssp ------CEEEECCCSBCCEESSCEEEEEEEEESSSS--CEEEEEETTEECCCSSSEEEE--EET----TEEEEEEESCCG
T ss_pred ------CcccccCCCccEEcCCCcEEEEEEEeeCCC--CEEEEeECCEECCCCCcEEEE--EEC----CEEEEEECCCCc
Confidence 44444332 345789999999999999988 899999999998766544332 222 246899999999
Q ss_pred CCCeEEEEEEEeCCCcEEeEEEEEEEee------------------------------------CCeecCCCCceEEEEe
Q psy1095 238 EDEGEFTCRVANELGEVVTSACLIVDVV------------------------------------KGKDLTSDGRLNIITV 281 (325)
Q Consensus 238 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~------------------------------------~~~~~~~~~~~~~~~~ 281 (325)
+|+|.|+|.|.|..|.....+.|.|... .+..+..+.+..+...
T Consensus 357 ~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~ 436 (570)
T 3b43_A 357 EDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSE 436 (570)
T ss_dssp GGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEE
T ss_pred ccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEc
Confidence 9999999999999998887777776322 2222223334444445
Q ss_pred CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccCC
Q psy1095 282 GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKII 325 (325)
Q Consensus 282 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~i 325 (325)
+....|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.|
T Consensus 437 ~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~ 480 (570)
T 3b43_A 437 NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRF 480 (570)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcc
Confidence 55568999999999999999999999999999999999988853
No 3
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=5.4e-38 Score=271.30 Aligned_cols=300 Identities=22% Similarity=0.298 Sum_probs=217.3
Q ss_pred eeeecccCCCCcccCCCC---CCCCCCCCCccc-----CCCCCCCcccccccccc-------cccccCCCCeeEecCCce
Q psy1095 11 LSVKLTRPSGLMSGHSTP---RSTPRSTPPRSI-----SPLSSRTFTPYSLNSAI-------RTRRLTSSPRFYAVPHNK 75 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~---~~~~~~l~i~~v-----~~~d~G~Y~c~~~~~~~-------~~~~~~~~p~~~~~~~~~ 75 (325)
..+.|.+++..+...... .....++.|.++ +.+|+|.|+|.+.+... ....+..+|.+...+...
T Consensus 52 ~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~ 131 (403)
T 3laf_A 52 PVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESI 131 (403)
T ss_dssp CEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCE
T ss_pred ceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcE
Confidence 357788877766543211 122344555555 88899999999975322 123444678888888888
Q ss_pred EecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC---CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEE
Q psy1095 76 ICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP---NARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV-EATA 151 (325)
Q Consensus 76 ~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~ 151 (325)
.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..+..... ...|.|.+++.+|+|.|+|.+.|..+.. ....
T Consensus 132 ~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 208 (403)
T 3laf_A 132 TAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLP---SGALQISRLQPGDSGVYRCSARNPASTRTGNEA 208 (403)
T ss_dssp EEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECT---TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCE
T ss_pred EEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcC---CceEEEcccccccCEEEEEEEEcCCCceeccce
Confidence 899999999999999999999999999988743 23333322 2359999999999999999999876643 3456
Q ss_pred EEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEE
Q psy1095 152 RLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLK 231 (325)
Q Consensus 152 ~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (325)
.+.|...+.....+.+...+....+.+|+.+.|.|.+.+.|+ +.+.|++++..+......... ..+ ..|.
T Consensus 209 ~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~~~~~~~~--~~~------~~L~ 278 (403)
T 3laf_A 209 EVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPP--PSFTWLRGEEVIQLRSKKYSL--LGG------SNLL 278 (403)
T ss_dssp EEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESC--CEEEEEETTEECCCSSSSEEE--ETT------TEEE
T ss_pred eEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCC--CeEEEEECCeeccCCCceEEE--CCc------cEEE
Confidence 677776654433344555666677889999999999999888 899999999887644332211 222 3799
Q ss_pred eCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCee-------cCCCCce-------------EEEEeC---------
Q psy1095 232 IPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKD-------LTSDGRL-------------NIITVG--------- 282 (325)
Q Consensus 232 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-------~~~~~~~-------------~~~~~~--------- 282 (325)
|.+++.+|+|.|+|.|.|..+.....+.|.|...+... +..+..+ ..+..+
T Consensus 279 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 358 (403)
T 3laf_A 279 ISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDY 358 (403)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSS
T ss_pred EeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCc
Confidence 99999999999999999999988888888775432111 1111100 011111
Q ss_pred ----CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 283 ----GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 283 ----~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
....|.|.++..+|+|.|+|.|.|..|..+.++.|.|+++|
T Consensus 359 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 359 FQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp EEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred EEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 12369999999999999999999999999999999999876
No 4
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.5e-35 Score=243.92 Aligned_cols=245 Identities=25% Similarity=0.452 Sum_probs=198.4
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..||.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+....++.+....+...|.|.+++..|+|.|+|.+.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 36899999999999999999999999999999999999999999887777776666778899999999999999999999
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecC-cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGL-ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~-~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
..+.....+.|.|..+ |.+.... ....+..|+.+.|.|.+.+.|. +.+.|++++..+......... ..+
T Consensus 83 ~~g~~~~~~~l~V~~~------p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~~~~--~~~ 152 (284)
T 2rik_A 83 VAGKDSCSAQLGVQEP------PRFIKKLEPSRIVKQDEHTRYECKIGGSPE--IKVLWYKDETEIQESSKFRMS--FVE 152 (284)
T ss_dssp TTEEEEEEEEEEEECC------CEEEECCCSEEEEETTCCEEEEEEEESSSC--CEEEEEETTEECCCSSSEEEE--EET
T ss_pred CCceEEEEEEEEccCC------CcccccCCCceEecCCceEEEEEEEeeeCC--CEEEEEECCEECcCCCcEEEE--EcC
Confidence 9888888888888775 4443333 2346789999999999998887 899999999988765543332 222
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeC-----------------------------------
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVK----------------------------------- 266 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~----------------------------------- 266 (325)
....|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+
T Consensus 153 ----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~ 228 (284)
T 2rik_A 153 ----SVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 228 (284)
T ss_dssp ----TEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEE
T ss_pred ----CEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEE
Confidence 24689999999999999999999999988887777774322
Q ss_pred -CeecCCCCceEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 267 -GKDLTSDGRLNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 267 -~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
+..+..+.+..+...+....|.|.++..+|+|.|+|.|.|..|..+.++.|.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 229 DKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284 (284)
T ss_dssp TTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEcC
Confidence 1111122223333344456899999999999999999999999999999999874
No 5
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=5.5e-36 Score=267.43 Aligned_cols=302 Identities=18% Similarity=0.151 Sum_probs=217.3
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccc--cccccCCCCeeEecCCceEecCCCeEEEEEEE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAI--RTRRLTSSPRFYAVPHNKICDLGDTVRFQCSV 89 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~--~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~ 89 (325)
.++|.+++..++ ......+|.|.+++.+|+|.|+|.+.++.. ..+.+..||.+...+....+.+|+.+.|.|.+
T Consensus 63 ~v~W~~~~~~~~----~~~~~~~L~I~~~~~~D~G~Y~C~a~ng~~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~ 138 (524)
T 2ec8_A 63 FVKWTFEILDET----NENKQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPL 138 (524)
T ss_dssp EEEEEEESSSCC----EEECSSEEEESSCCSTTCEEEEEEETTSCEEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCB
T ss_pred eEEEcCCCcccc----ccCccceEEEcccchhhCEEEEEeecCCcceEEEEEECCCCcccccccceEEEcCCeEEEECcC
Confidence 467888887663 233456899999999999999999988321 22344466666667777889999999999999
Q ss_pred EecCCCeeEEee-CCeeCCCCCcEEEEecCCeEEEEEccCCCCCCe-EEEEEEEeCCeeE-EEEEEEEEECCCcccCCCe
Q psy1095 90 TGQPAPWTSWSK-DGKPATPNARVTIREKEDLRFLEISEVTLEDAG-LYTIKVENNYGSV-EATARLEIMDPRAIISRPK 166 (325)
Q Consensus 90 ~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~ 166 (325)
.+.+.+.+.|++ ++..+....++...... .|.|.+++.+|+| .|+|.+.+..+.. ...+.|.|...+ ..+|.
T Consensus 139 ~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~--~~~p~ 213 (524)
T 2ec8_A 139 TDPEVTNYSLKGCQGKPLPKDLRFIPDPKA---GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAF--KAVPV 213 (524)
T ss_dssp SCCCCSCEEEECSSSCCCCSSCEEEEETTT---EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCC--CSCCE
T ss_pred CCCccceEEEEccCCcCcCCCCceeECCCc---cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCC--CCCCc
Confidence 887778999998 78888766666554333 5999999999999 9999998876544 235667776321 13577
Q ss_pred eeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC-CcceeEEEEEeCCCCCCCCeEEEE
Q psy1095 167 VLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS-KENLVIARLKIPHVYPEDEGEFTC 245 (325)
Q Consensus 167 ~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C 245 (325)
+...+....+.+|+.+.|.|.+.+.|.+ ..+.|++++..+......... ..+ ........|.|.+++.+|+|.|+|
T Consensus 214 i~~~~~~~~v~~G~~v~L~C~~~g~p~p-~~i~W~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 290 (524)
T 2ec8_A 214 VSVSKASYLLREGEEFTVTCTIKDVSSS-VYSTWKRENSQTKLQEKYNSW--HHGDFNYERQATLTISSARVNDSGVFMC 290 (524)
T ss_dssp EECSCSEEEEETTSCEEEEEEEEESSTT-CEEEEEETTCSCCCCEEEEEE--ECSSSCEEEEEEEEESSCCTTTCEEEEE
T ss_pred EEecCCcceEEcCCcEEEEEEEecCCCc-EEEEEEeCCCCCccccccccc--cccCCccceEEEEEECCCCHHHCEEEEE
Confidence 7777777789999999999999998872 349999998773111110001 111 122345799999999999999999
Q ss_pred EEEeCCCcEEeEEEEEEEeeCCee----------cCCCC--------------c-eEEE---------------EeC---
Q psy1095 246 RVANELGEVVTSACLIVDVVKGKD----------LTSDG--------------R-LNII---------------TVG--- 282 (325)
Q Consensus 246 ~~~~~~~~~~~~~~l~v~~~~~~~----------~~~~~--------------~-~~~~---------------~~~--- 282 (325)
.|.|..|.....+.|.|...+... +..+. . +... ..+
T Consensus 291 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~ 370 (524)
T 2ec8_A 291 YANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESN 370 (524)
T ss_dssp EEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSC
T ss_pred EEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCC
Confidence 999999988887777774322110 11000 1 1110 001
Q ss_pred --CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccCC
Q psy1095 283 --GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKII 325 (325)
Q Consensus 283 --~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~i 325 (325)
....|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.|
T Consensus 371 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i 415 (524)
T 2ec8_A 371 IRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEI 415 (524)
T ss_dssp CEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEE
T ss_pred ceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeE
Confidence 2358999999999999999999999999999999999998864
No 6
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4.3e-35 Score=261.65 Aligned_cols=306 Identities=14% Similarity=0.165 Sum_probs=204.7
Q ss_pred ceeeeccc-CCCCcccCCCC-CCCCCCCCCcccCCCCCC-Ccccccccccccc------ccc----CCCCeeEecCCceE
Q psy1095 10 SLSVKLTR-PSGLMSGHSTP-RSTPRSTPPRSISPLSSR-TFTPYSLNSAIRT------RRL----TSSPRFYAVPHNKI 76 (325)
Q Consensus 10 ~~~~~~~~-~~~~~~~~~~~-~~~~~~l~i~~v~~~d~G-~Y~c~~~~~~~~~------~~~----~~~p~~~~~~~~~~ 76 (325)
...+.|-+ ++..+...... ......|.|.+++.+|+| .|+|.+.+..... +.+ ..+|.+...|....
T Consensus 143 ~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~ 222 (524)
T 2ec8_A 143 VTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYL 222 (524)
T ss_dssp CSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEE
T ss_pred cceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcce
Confidence 35677855 44444332211 122457889999999999 9999998754322 222 36888888888888
Q ss_pred ecCCCeEEEEEEEEecCCCe-eEEeeCCeeC--CCCCcEEEEe---cCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEE
Q psy1095 77 CDLGDTVRFQCSVTGQPAPW-TSWSKDGKPA--TPNARVTIRE---KEDLRFLEISEVTLEDAGLYTIKVENNYGSVEAT 150 (325)
Q Consensus 77 v~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~--~~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 150 (325)
+.+|+++.|.|.+.+.|.+. +.|++++..+ ....+..... ......|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 223 v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~ 302 (524)
T 2ec8_A 223 LREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT 302 (524)
T ss_dssp EETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE
T ss_pred EEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE
Confidence 99999999999999988886 9999999874 3222222211 1224679999999999999999999999988888
Q ss_pred EEEEEECCCcccCCCeeeecC---cCeeEecCCcEEEEEEEEecCCCCCe-eEEeeCCEEeccCCCCceEEEecCCccee
Q psy1095 151 ARLEIMDPRAIISRPKVLNGL---ENLRCCDGDSVTFECQVQVVPPNDHD-ISWFRNNRLIKLDSDMKPEVQVDSKENLV 226 (325)
Q Consensus 151 ~~l~v~~~~~~~~~p~~~~~~---~~~~v~~g~~v~l~C~~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (325)
+.|.|..+ |.+...+ ....+.+|+.+.|.|.+.+.|. +. +.|++++..+...... ......+..+..
T Consensus 303 ~~l~V~~~------p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~--p~~v~W~k~g~~~~~~~~~-~~~~~~~~~~~~ 373 (524)
T 2ec8_A 303 TTLEVVDK------GFINIFPMINTTVFVNDGENVDLIVEYEAFPK--PEHQQWIYMNRTFTDKWED-YPKSENESNIRY 373 (524)
T ss_dssp EEEEEESS------CEEEEEESSCSEEEECTTCCEEEEEEEEEESC--CCEEEEESSSCBCSSSBCC-EESCCSSSCCEE
T ss_pred EEEEEecc------CceEeecCCCceEEEcCCCcEEEEEEEeecCC--CcEEEEEECCeeccCCccc-eeEEccCCCcee
Confidence 88999876 3333322 3467889999999999999998 77 9999999887654421 111111112334
Q ss_pred EEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeec---------C--------------CC-Cce------
Q psy1095 227 IARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKDL---------T--------------SD-GRL------ 276 (325)
Q Consensus 227 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~---------~--------------~~-~~~------ 276 (325)
.+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+.... . .+ +..
T Consensus 374 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~~~~~~~~~~~~~ 453 (524)
T 2ec8_A 374 VSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSAS 453 (524)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECCCC----------
T ss_pred EEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEEECCCcccccccc
Confidence 57999999999999999999999999988888887743321100 0 11 100
Q ss_pred ----------EEEEeCCEE-E-EEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 277 ----------NIITVGGTS-V-LTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 277 ----------~~~~~~~~~-~-l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
.....++.. . ..+.....+|+|.|+|.|.|..|..+..+.|.|+++|.
T Consensus 454 ~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~ 513 (524)
T 2ec8_A 454 VLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNK 513 (524)
T ss_dssp CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-----
T ss_pred cCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCH
Confidence 000011111 1 12444446999999999999999999999999988763
No 7
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=260.26 Aligned_cols=298 Identities=10% Similarity=0.087 Sum_probs=183.3
Q ss_pred eeeecccCCCCcccCCCCCCCCC---CCCCcccCCCCCCCccccccccccccc---ccCCCCeeEec-CCceEecCCCeE
Q psy1095 11 LSVKLTRPSGLMSGHSTPRSTPR---STPPRSISPLSSRTFTPYSLNSAIRTR---RLTSSPRFYAV-PHNKICDLGDTV 83 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~Y~c~~~~~~~~~~---~~~~~p~~~~~-~~~~~v~~g~~v 83 (325)
++.+|-..+..+..........+ +|.|.+++.+|+|.|+|.+.+..+... .+..+|.+... ..+.....|+.+
T Consensus 78 ~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~~~~ 157 (527)
T 3qs9_E 78 ISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQD 157 (527)
T ss_dssp CEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSS
T ss_pred eeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecCCce
Confidence 45666655554333222322233 388999999999999999987655321 12222222212 223334567888
Q ss_pred EEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEE-EEEEEECCCccc
Q psy1095 84 RFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEAT-ARLEIMDPRAII 162 (325)
Q Consensus 84 ~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~ 162 (325)
.|.|.+.|.|.|.++|++++..+...... ...........+...|+|.|+|.+.|..|..... +.|.|...+.
T Consensus 158 ~L~C~a~G~P~P~i~W~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~-- 231 (527)
T 3qs9_E 158 ALVCISESVPEPIVEWVLCDSQGESCKEE----SPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQ-- 231 (527)
T ss_dssp CEEEEEEESSCCEEEEEEC-----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCC--
T ss_pred EEEEEEceecCCeEEEEECCCCCcccccc----CCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCc--
Confidence 99999999999999999988765321100 0111112233456889999999999998866543 5666654422
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEE-ecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCe
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQ-VVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEG 241 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 241 (325)
+ .+....+.+|+.+.|.|.+. +.|. +.+.|++++..+.............+........|.|.+++.+|+|
T Consensus 232 ----~--~p~~~~v~~G~~v~L~C~~~~g~p~--p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG 303 (527)
T 3qs9_E 232 ----T--TLPQLFLKVGEPLWIRCKAVHVNHG--FGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTG 303 (527)
T ss_dssp ----C--SCCEEEECTTSCEEEEEEEEESSSC--CCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCE
T ss_pred ----c--CCCceEEeCCCeEEEEEEEccCCCC--eEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCe
Confidence 1 23356788999999999997 6776 8999999998765432221111111111223467999999999999
Q ss_pred EEEEEEEeCCCcEEeEEEEEEEeeCCeec---------CCCCce------------E-EEEeC------------CEEEE
Q psy1095 242 EFTCRVANELGEVVTSACLIVDVVKGKDL---------TSDGRL------------N-IITVG------------GTSVL 287 (325)
Q Consensus 242 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~---------~~~~~~------------~-~~~~~------------~~~~l 287 (325)
.|+|.|.|. ....+.|.|...+...+ ..+... . .+..+ +...|
T Consensus 304 ~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L 380 (527)
T 3qs9_E 304 YYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSI 380 (527)
T ss_dssp EEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEE
T ss_pred EEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEE
Confidence 999999987 55566666643221111 101100 0 11111 13479
Q ss_pred EEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccCC
Q psy1095 288 TIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKII 325 (325)
Q Consensus 288 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~i 325 (325)
.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.|
T Consensus 381 ~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i 418 (527)
T 3qs9_E 381 SKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQV 418 (527)
T ss_dssp EEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEE
T ss_pred EEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeE
Confidence 99999999999999999999999999999999998864
No 8
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=231.66 Aligned_cols=251 Identities=24% Similarity=0.413 Sum_probs=175.7
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEe-c-CCeEEEEEccCCC-CCCeEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIRE-K-EDLRFLEISEVTL-EDAGLYTIK 139 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~-~~~~~l~i~~~~~-~d~G~Y~C~ 139 (325)
..+|.|...|.+..+.+|+++.|.|.+.+.|.+.+.|++++..+... ++.... . +....|.|.+++. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46899999999999999999999999999999999999999888654 443332 2 3347899999998 999999999
Q ss_pred EEeCCeeEEEEEEEEEECCCccc-CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEE
Q psy1095 140 VENNYGSVEATARLEIMDPRAII-SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQ 218 (325)
Q Consensus 140 ~~~~~~~~~~~~~l~v~~~~~~~-~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 218 (325)
+.|..+.....+.|.|...+... ..|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+...........
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~--~~v~W~k~~~~~~~~~~~~~~~~ 160 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPD--PEITWFKDFLPVDPSASNGRIKQ 160 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSC--CEEEEEETTEECCGGGGTTSEEE
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCC--CeEEEEECCEECcCCCCcceEEe
Confidence 99998887778888888653321 2266676667778899999999999999887 89999999988765422111111
Q ss_pred ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE-EEEEEEeeC--Ce--------ecCCCCceE----------
Q psy1095 219 VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS-ACLIVDVVK--GK--------DLTSDGRLN---------- 277 (325)
Q Consensus 219 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~--~~--------~~~~~~~~~---------- 277 (325)
... ..|.|.+++.+|+|.|+|.|.|..|..... +.|.|.... +. .+..+..+.
T Consensus 161 ~~~------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~ 234 (304)
T 2yd9_A 161 LRS------GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPM 234 (304)
T ss_dssp CTT------SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESC
T ss_pred CCC------eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCC
Confidence 111 379999999999999999999998866533 444442211 10 011111111
Q ss_pred ---EEEeC------------CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 278 ---IITVG------------GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 278 ---~~~~~------------~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
.+..+ +...|.|.++ +|+|.|+|.|.|..|..+.++.|.|++++.
T Consensus 235 p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 235 PYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp CEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC------
T ss_pred CEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 11111 2335777766 689999999999999999999999998875
No 9
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.3e-34 Score=248.57 Aligned_cols=292 Identities=20% Similarity=0.212 Sum_probs=195.0
Q ss_pred eeecccCCCCcccCC--CCCCCCCCCCCccc-CCCCCCCccccccccccccccc------CCCCeeE-ecCCceEecCCC
Q psy1095 12 SVKLTRPSGLMSGHS--TPRSTPRSTPPRSI-SPLSSRTFTPYSLNSAIRTRRL------TSSPRFY-AVPHNKICDLGD 81 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~--~~~~~~~~l~i~~v-~~~d~G~Y~c~~~~~~~~~~~~------~~~p~~~-~~~~~~~v~~g~ 81 (325)
.++|.+++..+.... .......+|.|.++ +.+|+|.|+|.+.|..+..... ...+.+. ..+....+.+|+
T Consensus 39 ~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~ 118 (384)
T 3kld_A 39 HIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQ 118 (384)
T ss_dssp EEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETC
T ss_pred EEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCC
Confidence 577888777664332 11222446677776 7899999999998876543211 1122221 223446788999
Q ss_pred eEEEEEEEE-ecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE---EEEEEEEC
Q psy1095 82 TVRFQCSVT-GQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA---TARLEIMD 157 (325)
Q Consensus 82 ~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~---~~~l~v~~ 157 (325)
.+.|.|... +.|.+.+.|++++.++....+...... ...|.|.+++.+|+|.|+|.+.|..+.... ...+.+..
T Consensus 119 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~ 196 (384)
T 3kld_A 119 GMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQE--TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRN 196 (384)
T ss_dssp CEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTT--TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEE
T ss_pred CeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcC--CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEcc
Confidence 999999753 467789999999988765544433222 235999999999999999999997654321 11222211
Q ss_pred CC-cccCCCeee-ecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCE-EeccCCCCceEEEecCCcceeEEEEEeCC
Q psy1095 158 PR-AIISRPKVL-NGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNR-LIKLDSDMKPEVQVDSKENLVIARLKIPH 234 (325)
Q Consensus 158 ~~-~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 234 (325)
.. .....|.+. ..+....+.+|+.+.|.|.+.|.|. +.+.|++++. .+.... ..... ...|.|.+
T Consensus 197 ~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~i~W~k~~~~~~~~~~----~~~~~------~~~L~I~~ 264 (384)
T 3kld_A 197 DGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV--PTILWRRADGKPIARKA----RRHKS------NGILEIPN 264 (384)
T ss_dssp EEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESC--CEEEEEETTCCCCCTTC----EECTT------SCEEEECS
T ss_pred CCcccccCCceeecCCCceEecCCCcEEEEEEEeecCC--CcEEEEeCCCccccccc----eecCC------CcEEEECC
Confidence 00 000112222 2234456789999999999999998 8999999543 433211 10011 24799999
Q ss_pred CCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeC------------------------------------CeecCCCCceEE
Q psy1095 235 VYPEDEGEFTCRVANELGEVVTSACLIVDVVK------------------------------------GKDLTSDGRLNI 278 (325)
Q Consensus 235 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~------------------------------------~~~~~~~~~~~~ 278 (325)
++.+|+|.|+|.|.|..|.......|.|...+ +..+..+.+..+
T Consensus 265 v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~ 344 (384)
T 3kld_A 265 FQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI 344 (384)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEE
T ss_pred CChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEE
Confidence 99999999999999999988877777764332 122212222111
Q ss_pred EEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 279 ITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 279 ~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
.++ .|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 345 --~~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 345 --EQG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp --ETT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred --eCC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 222 699999999999999999999999999999999864
No 10
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2.1e-33 Score=263.40 Aligned_cols=290 Identities=22% Similarity=0.334 Sum_probs=218.5
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccccc-----ccc---CCCCeeEecCCceEecCCCeE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRL---TSSPRFYAVPHNKICDLGDTV 83 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~---~~~p~~~~~~~~~~v~~g~~v 83 (325)
.++|.+++..+.. ....|.|.+++.+|+|.|+|.+.+..+.. ..+ ..+|.+...+....+.+|+.+
T Consensus 374 ~v~W~k~g~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v 447 (816)
T 3dmk_A 374 TVSWMKDGKAIGH------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSV 447 (816)
T ss_dssp EEEEEETTEECSC------CSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCE
T ss_pred EEEEEECCEECCC------CCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCE
Confidence 5667776655432 34578999999999999999998765422 222 367888888888889999999
Q ss_pred EEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEe----c-CCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 84 RFQCSVTGQPAPWTSWSKDGKPATPNARVTIRE----K-EDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 84 ~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
.|.|.+.|.|.+.++|++++..+....++.... . .....|.|.+++.+|+|.|+|.+.|..|.......|.|...
T Consensus 448 ~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 527 (816)
T 3dmk_A 448 FLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGL 527 (816)
T ss_dssp EEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSS
T ss_pred EEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecC
Confidence 999999999999999999999998776665432 1 22356999999999999999999999998888888888765
Q ss_pred CcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCC-C
Q psy1095 159 RAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVY-P 237 (325)
Q Consensus 159 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~ 237 (325)
+ .+ .......+..|+.+.|.|.+.+.|. +.+.|++++..+......... .++ .|.|.++. .
T Consensus 528 p------~~-~~~~~~~v~~G~~v~l~C~~~g~p~--~~i~W~k~~~~l~~~~~~~~~--~~~-------~l~i~~v~~~ 589 (816)
T 3dmk_A 528 P------YI-RQMEKKAIVAGETLIVTCPVAGYPI--DSIVWERDNRALPINRKQKVF--PNG-------TLIIENVERN 589 (816)
T ss_dssp C------EE-CCCCCEEEETTCCEEEECCEECSSE--EEEEEEETTEESCCSTTEEEC--TTS-------EEEESSCCHH
T ss_pred C------ee-EccCCeEEecCCeEEEEEEecCCCC--CEEEEEECCeEcccCCceEEe--cCC-------eEEEEecCcc
Confidence 3 22 2334567889999999999999887 799999999988654432221 233 79999998 5
Q ss_pred CCCeEEEEEEEeCCCcEE-eEEEEEEEeeCCee--------------------------------------cCCCCceEE
Q psy1095 238 EDEGEFTCRVANELGEVV-TSACLIVDVVKGKD--------------------------------------LTSDGRLNI 278 (325)
Q Consensus 238 ~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~--------------------------------------~~~~~~~~~ 278 (325)
+|+|.|+|.|.|..|... ..+.+.+...+... +..+.....
T Consensus 590 ~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~ 669 (816)
T 3dmk_A 590 SDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITT 669 (816)
T ss_dssp HHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEE
T ss_pred ccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeE
Confidence 899999999999988543 34455543222110 000000111
Q ss_pred E-EeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccCC
Q psy1095 279 I-TVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKII 325 (325)
Q Consensus 279 ~-~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~i 325 (325)
. .......|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.|
T Consensus 670 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~ 717 (816)
T 3dmk_A 670 SRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRW 717 (816)
T ss_dssp EEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEE
T ss_pred EEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCce
Confidence 1 1123467999999999999999999999999999999999988853
No 11
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-34 Score=251.90 Aligned_cols=288 Identities=11% Similarity=0.069 Sum_probs=188.9
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccccc------cccCCCCeeEecCCceEecCCCeEEE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT------RRLTSSPRFYAVPHNKICDLGDTVRF 85 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~------~~~~~~p~~~~~~~~~~v~~g~~v~l 85 (325)
.++|...+.................+..+++.|+|.|+|.+.|..+.. ..+..+|.+ .|....+.+|+.+.|
T Consensus 170 ~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L 247 (527)
T 3qs9_E 170 IVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWI 247 (527)
T ss_dssp EEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEE
T ss_pred eEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEE
Confidence 567776665443221111111222356778999999999998765533 333455554 566778999999999
Q ss_pred EEEEE-ecCCCeeEEeeCCeeCCCCCcEEEEe--c----CCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 86 QCSVT-GQPAPWTSWSKDGKPATPNARVTIRE--K----EDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 86 ~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~--~----~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
.|.+. +.|.+.++|++++..+.....+.... . ....+|.|.+++.+|+|.|+|.+.|. ....+.|.|...
T Consensus 248 ~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~ 324 (527)
T 3qs9_E 248 RCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK 324 (527)
T ss_dssp EEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--
T ss_pred EEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEcc
Confidence 99996 89999999999998876543332211 1 12346999999999999999999876 566777888765
Q ss_pred CcccCCCeeeecC--cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCC
Q psy1095 159 RAIISRPKVLNGL--ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVY 236 (325)
Q Consensus 159 ~~~~~~p~~~~~~--~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 236 (325)
+. +...+ ....+.+|+.+.|.|.+.|.|. +.+.|++++..+....... ..+ ..|.|.+++
T Consensus 325 p~------i~~~~~~~~~~v~~G~~v~L~C~~~g~P~--p~i~W~k~g~~l~~~~~~~----~~~------~~L~I~~v~ 386 (527)
T 3qs9_E 325 GF------INATNSSEDYEIDQYEEFCFSVRFKAYPQ--IRCTWTFSRKSFPCEQKGL----DNG------YSISKFCNH 386 (527)
T ss_dssp CE------EECCCSCCEECCCTTCCCCEEEEEEEESC--CEEEEEETTEEEECBCCBC----SSS------SEEEEECCC
T ss_pred Cc------cccccCcccEEEcCCCeEEEEEEEEecCC--CEEEEEECCEECcCCcccc----cCC------cEEEEecCC
Confidence 32 22221 2345778999999999999998 8999999999886544321 111 479999999
Q ss_pred CCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeecC-------------CCCceEEE------------------------
Q psy1095 237 PEDEGEFTCRVANELGEVVTSACLIVDVVKGKDLT-------------SDGRLNII------------------------ 279 (325)
Q Consensus 237 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~-------------~~~~~~~~------------------------ 279 (325)
.+|+|.|+|.|.|..|.....+.|.|...+.-... +...+...
T Consensus 387 ~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (527)
T 3qs9_E 387 KHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANR 466 (527)
T ss_dssp TTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCCCE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC----
T ss_pred cccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCCCCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceecccc
Confidence 99999999999999999888888877533321111 00011110
Q ss_pred --EeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 280 --TVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 280 --~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
.......+.|.-...+|+|.|+|.|.|..|..+..+.|.|.++
T Consensus 467 ~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p 511 (527)
T 3qs9_E 467 KVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGP 511 (527)
T ss_dssp -----CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC-----
T ss_pred ccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCC
Confidence 0011122333334457999999999999999999999998765
No 12
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=249.02 Aligned_cols=291 Identities=10% Similarity=0.098 Sum_probs=174.3
Q ss_pred eeecccCCCCcccCCCCCCCC---CCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeEecCCceEecCCCeE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTP---RSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFYAVPHNKICDLGDTV 83 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~---~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v 83 (325)
.+.|...+..+.......... .+|.|.+++.+|+|.|+|.+.|..+.. +.+..+|.+. ...+..+..|+.+
T Consensus 79 ~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~-~~~p~~~~~~~~~ 157 (423)
T 3qs7_E 79 SCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYT-LRRPYFRKMENQD 157 (423)
T ss_dssp EEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----C-EEEEEEEECSSSS
T ss_pred eEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcccc-ccCCcEeccCCce
Confidence 456766554433222222122 257899999999999999998875532 2333445442 1223345668889
Q ss_pred EEEEEEEecCCCeeEEeeCCeeCCCCCc---EEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE-EEEEEEECCC
Q psy1095 84 RFQCSVTGQPAPWTSWSKDGKPATPNAR---VTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA-TARLEIMDPR 159 (325)
Q Consensus 84 ~l~C~~~~~p~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~ 159 (325)
.|.|.+.|.|.|.++|++++..+..... ..+.... ..+ ...|+|.|+|.+.|..|.... .+.|.|...+
T Consensus 158 ~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~--~~l-----~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p 230 (423)
T 3qs7_E 158 ALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEE--KVL-----HELFGTDIRCCARNELGRECTRLFTIDLNQTP 230 (423)
T ss_dssp CEEEEEEESSCCEEEEEEC-------------CEEECC--SEE-----CCCCSSCEEEEEECSSCEEEEECEEEESSSCC
T ss_pred EEEEEEeeecCCeEEEEECCCCCccccccccccccccc--eEE-----ecccCeEEEEEEEcCCCCcceeeEEEEEecCC
Confidence 9999999999999999998875432110 0011111 111 678999999999999886543 3555554432
Q ss_pred cccCCCeeeecCcCeeEecCCcEEEEEEEEe-cCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCC
Q psy1095 160 AIISRPKVLNGLENLRCCDGDSVTFECQVQV-VPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPE 238 (325)
Q Consensus 160 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 238 (325)
.. .+....+.+|+.+.|.|.+.+ .|+ +.+.|++++..+.............+........|.|.+++.+
T Consensus 231 ~~--------~~~~~~v~~G~~v~L~C~~~g~~p~--p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 300 (423)
T 3qs7_E 231 QT--------TLPQLFLKVGEPLWIRCKAVHVNHG--FGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN 300 (423)
T ss_dssp CS--------STTEEEEETTSCEEEEEEEEESSSC--CCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTT
T ss_pred cc--------CCCceEEeCCCeEEEEEEEEcCCCC--cEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHH
Confidence 21 123567889999999999998 555 7899999998765432111111111111223457999999999
Q ss_pred CCeEEEEEEEeCCCcEEeEEEEEEEeeCCeec---------CCCCce-------------EEEEeCCE------------
Q psy1095 239 DEGEFTCRVANELGEVVTSACLIVDVVKGKDL---------TSDGRL-------------NIITVGGT------------ 284 (325)
Q Consensus 239 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~---------~~~~~~-------------~~~~~~~~------------ 284 (325)
|+|.|+|.|.|. ....+.|.|...+...+ ..+... ..+..++.
T Consensus 301 D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 377 (423)
T 3qs7_E 301 DTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNG 377 (423)
T ss_dssp TCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSS
T ss_pred HCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCC
Confidence 999999999988 56666677743321111 111111 11222221
Q ss_pred EEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 285 SVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 285 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
..+.+.....+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 378 ~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p 416 (423)
T 3qs7_E 378 YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGT 416 (423)
T ss_dssp SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----
T ss_pred cEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCC
Confidence 122236677899999999999999999999999999877
No 13
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=2.8e-34 Score=246.37 Aligned_cols=291 Identities=19% Similarity=0.212 Sum_probs=200.8
Q ss_pred eeeecccCCCCcccCC--CCCCCCCCCCCcccCC-CCCCCccccccccccccc------ccCCCCeeE-ecCCceEecCC
Q psy1095 11 LSVKLTRPSGLMSGHS--TPRSTPRSTPPRSISP-LSSRTFTPYSLNSAIRTR------RLTSSPRFY-AVPHNKICDLG 80 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~--~~~~~~~~l~i~~v~~-~d~G~Y~c~~~~~~~~~~------~~~~~p~~~-~~~~~~~v~~g 80 (325)
..++|.+++..+.... .......+|.|.++.. +|+|.|+|.+.+..+... .+..+|.+. ..+....+.+|
T Consensus 37 ~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G 116 (382)
T 1cs6_A 37 ATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEG 116 (382)
T ss_dssp CEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETT
T ss_pred CEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecC
Confidence 4678888777665432 1222345788999996 999999999987654321 222223222 23456678999
Q ss_pred CeEEEEEEE-EecCCCeeEEeeCCeeCC--CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEE-----EEEE
Q psy1095 81 DTVRFQCSV-TGQPAPWTSWSKDGKPAT--PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVE-----ATAR 152 (325)
Q Consensus 81 ~~v~l~C~~-~~~p~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-----~~~~ 152 (325)
+++.|.|.+ .+.|.+.+.|++++..+. ...+.... .....|.|.+++.+|+|.|+|.+.+..+... ....
T Consensus 117 ~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~ 194 (382)
T 1cs6_A 117 WGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVS--QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQ 194 (382)
T ss_dssp SCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEEC--TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEE
T ss_pred CcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEe--cCceEEEEEeeCcccCeeEEEEEEEccccccceeEcccee
Confidence 999999995 457889999999987643 22333322 2234699999999999999999988653221 1234
Q ss_pred EEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEE
Q psy1095 153 LEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLK 231 (325)
Q Consensus 153 l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (325)
|.+........+|.+... +....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... . ....|.
T Consensus 195 l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~--~~i~W~~~~~~~~~~~~------~------~~~~L~ 260 (382)
T 1cs6_A 195 LSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPV--PQIKWRKLDGSQTSKWL------S------SEPLLH 260 (382)
T ss_dssp EEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESC--CEEEEEECCSCCSCCCS------B------SSSEEE
T ss_pred eccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCC--CEEEEEECCcccccEEe------c------CCcEEE
Confidence 454432111123444432 34567889999999999999987 89999998876543111 1 124799
Q ss_pred eCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCC------------------------------------eecCCCCc
Q psy1095 232 IPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKG------------------------------------KDLTSDGR 275 (325)
Q Consensus 232 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~------------------------------------~~~~~~~~ 275 (325)
|.+++.+|+|.|+|.|.|..|.....+.|.|...+. ..+..+.+
T Consensus 261 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 340 (382)
T 1cs6_A 261 IQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNR 340 (382)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSS
T ss_pred EccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCce
Confidence 999999999999999999999887777777643321 11111111
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 276 LNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 276 ~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
... .+ ..|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 341 ~~~--~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~a 382 (382)
T 1cs6_A 341 IEV--SG--GELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382 (382)
T ss_dssp EEE--ET--TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEE--EC--CEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEeC
Confidence 111 11 2699999999999999999999999999999999863
No 14
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=4.7e-32 Score=223.82 Aligned_cols=243 Identities=23% Similarity=0.372 Sum_probs=180.9
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecC-CCeeEEee-CCeeCCCC-CcEEEEe-cCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQP-APWTSWSK-DGKPATPN-ARVTIRE-KEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~~-~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
|+.+...|.+..+.+|+++.|.|.+.+.| .+.+.|++ ++..+... .++.+.. ......|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 67888999999999999999999998876 68999999 77777543 3444432 345678999999999999999999
Q ss_pred EeCCe-eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEe
Q psy1095 141 ENNYG-SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQV 219 (325)
Q Consensus 141 ~~~~~-~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 219 (325)
.+..+ .....+.|.|... |.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+............
T Consensus 82 ~n~~g~~~~~~~~l~v~~~------~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~ 153 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQK------LMFKNAPTPQEFKEGEDAVIVCDVVSSLP--PTIIWKHKGRDVILKKDVRFIVLS 153 (291)
T ss_dssp ECTTSCEEEEEEEEEEECC------SEEEECCSSEEEETTSCEEECCEEECSSC--CEEEEEETTSCSSTTCCTTEEECT
T ss_pred EcCCCCeeEEEEEEEeecc------ccccCCCCcccccCCCeEEEEEEeccCCC--CEEEEEECCEEcccCCCceEEEcc
Confidence 99875 4456677777654 56666666778899999999999999887 899999999887655444333222
Q ss_pred cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE--eEEEEEEEeeC-------------------------------
Q psy1095 220 DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV--TSACLIVDVVK------------------------------- 266 (325)
Q Consensus 220 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~------------------------------- 266 (325)
. ..|.|.+++.+|+|.|+|.+.|..+... ..+.|.|...+
T Consensus 154 ~-------~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 226 (291)
T 1qz1_A 154 N-------NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEP 226 (291)
T ss_dssp T-------SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCC
T ss_pred C-------CcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCC
Confidence 2 3799999999999999999998764332 23334432221
Q ss_pred -------CeecCCCCc--eEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 267 -------GKDLTSDGR--LNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 267 -------~~~~~~~~~--~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
+..+..+.. ...........|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 227 ~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~k 291 (291)
T 1qz1_A 227 TMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291 (291)
T ss_dssp EEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEcC
Confidence 111111100 01111222357999999999999999999999999999999999764
No 15
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.3e-33 Score=243.18 Aligned_cols=296 Identities=19% Similarity=0.214 Sum_probs=201.5
Q ss_pred ceeeecccCCCCcccCCC---CCCCCCCCCCcccCCCCCCCcccccccccccccc------cC--CCCeeEecCCceEec
Q psy1095 10 SLSVKLTRPSGLMSGHST---PRSTPRSTPPRSISPLSSRTFTPYSLNSAIRTRR------LT--SSPRFYAVPHNKICD 78 (325)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~------~~--~~p~~~~~~~~~~v~ 78 (325)
...++|.+++..+..... ......+|.|.+++.+|+|.|+|.+.+..+.... +. ..|.+ .+....+.
T Consensus 36 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~ 113 (395)
T 1bih_A 36 GVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPA--KTHEKTPI 113 (395)
T ss_dssp SCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCC--EEEEECCB
T ss_pred CceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCc--CCcceeee
Confidence 357788888877655431 2334568999999999999999999876543221 11 22332 33456688
Q ss_pred CCCeEEEEEEE-EecCCCeeEEeeCC---eeCCC----CCcEEEEecCCeEEEEEccCCCCCCe---EEEEEEEeCCeeE
Q psy1095 79 LGDTVRFQCSV-TGQPAPWTSWSKDG---KPATP----NARVTIREKEDLRFLEISEVTLEDAG---LYTIKVENNYGSV 147 (325)
Q Consensus 79 ~g~~v~l~C~~-~~~p~~~v~W~~~~---~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~G---~Y~C~~~~~~~~~ 147 (325)
+|+.+.|.|.+ .+.|.+.+.|++++ .+... ..++.....+ .|.|.+++..|+| .|+|.+.+..+..
T Consensus 114 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~ 190 (395)
T 1bih_A 114 EGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDG---NLYFTIVTKEDVSDIYKYVCTAKNAAVDE 190 (395)
T ss_dssp TTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTS---CEEEEEECGGGCCSSEEEEEEEECTTCSS
T ss_pred eCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCC---cEEEEEEeeccCCCceEEEEEEEecccce
Confidence 99999999996 78899999999986 22111 2344433322 5999999999999 9999999987754
Q ss_pred EEEEEEEEEC---CCc----ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec
Q psy1095 148 EATARLEIMD---PRA----IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 148 ~~~~~l~v~~---~~~----~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
.......... .+. ....|.+ .+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~--~~i~W~~~g~~~~~~~~~~~~~~~~ 266 (395)
T 1bih_A 191 EVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPM--GYPNYFKNGKDVNGNPEDRITRHNR 266 (395)
T ss_dssp CEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSC--CCCEEEETTEECCCCTTSSEESCSS
T ss_pred EEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCC--CeEEEEECCEEcCCCCceeEEEEec
Confidence 3332222211 100 0112232 245667899999999999999887 7899999999886544332221011
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe-EEEEEEEeeCCee--------cCCCCce--------------E
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT-SACLIVDVVKGKD--------LTSDGRL--------------N 277 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~--------~~~~~~~--------------~ 277 (325)
. ....|.|.+++.+|+|.|+|.|.|..|.... .+.|.|...+... +..+... .
T Consensus 267 ~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~ 342 (395)
T 1bih_A 267 T----SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVV 342 (395)
T ss_dssp S----TTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCE
T ss_pred C----CCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeE
Confidence 0 1137999999999999999999999888655 6677764332111 1111111 0
Q ss_pred ------------EEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 278 ------------IITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 278 ------------~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
....++ .|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 343 W~~~g~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 395 (395)
T 1bih_A 343 WSHNAKPLSGGRATVTDS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQVN 395 (395)
T ss_dssp EEETTEECCSSSEEEETT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEECCEECCCCceEEECC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEEC
Confidence 011122 79999999999999999999999999999999883
No 16
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.5e-33 Score=243.48 Aligned_cols=297 Identities=20% Similarity=0.269 Sum_probs=204.0
Q ss_pred eeeecccCCCCcccCC----CCCCCCCCCCCc----ccCCCCCCCcccccccccccc------cccCCCCeeE-ecCCce
Q psy1095 11 LSVKLTRPSGLMSGHS----TPRSTPRSTPPR----SISPLSSRTFTPYSLNSAIRT------RRLTSSPRFY-AVPHNK 75 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~----~~~~~~~~l~i~----~v~~~d~G~Y~c~~~~~~~~~------~~~~~~p~~~-~~~~~~ 75 (325)
..++|.+++..+.... .......+|.|. +++.+|+|.|+|.+.+..+.. ..+..+|.+. ..+.+.
T Consensus 47 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~ 126 (404)
T 3p3y_A 47 PSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPV 126 (404)
T ss_dssp CEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCE
T ss_pred CeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCe
Confidence 3678888877554322 222234555554 899999999999998764432 2344555443 334557
Q ss_pred EecCCCeEEEEEEE-EecCCCeeEEeeCCee-CCCCCcEEEEecCCeEEEEEccCCCCC-CeEEEEEEEeCCeeEE---E
Q psy1095 76 ICDLGDTVRFQCSV-TGQPAPWTSWSKDGKP-ATPNARVTIREKEDLRFLEISEVTLED-AGLYTIKVENNYGSVE---A 149 (325)
Q Consensus 76 ~v~~g~~v~l~C~~-~~~p~~~v~W~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~~---~ 149 (325)
.+.+|+++.|.|.+ .+.|.+.+.|++++.. +....+...... ..|.|.+++..| +|.|+|.+.|..+... .
T Consensus 127 ~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~ 203 (404)
T 3p3y_A 127 VVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHN---GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKN 203 (404)
T ss_dssp EEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTT---SCEEESSCCSGGGSSCBEEEEECTTTCCEEECC
T ss_pred EEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCC---CcEEEEeeeeccCCcceEEEEEeccccceeccC
Confidence 78999999999998 7789999999998744 344444444322 359999999999 5999999998766422 2
Q ss_pred EEEEEEECCCcc-cCCCeeeecC---cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcce
Q psy1095 150 TARLEIMDPRAI-ISRPKVLNGL---ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENL 225 (325)
Q Consensus 150 ~~~l~v~~~~~~-~~~p~~~~~~---~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (325)
.+.+.+...+.. ..+|.+.... ....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... .....
T Consensus 204 ~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~--~~v~W~~~~~~~~~~~~---~~~~~----- 273 (404)
T 3p3y_A 204 PFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGGDLPSDKA---KFENF----- 273 (404)
T ss_dssp CBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSC--CEEEEEETTBCCCTTTE---EEEGG-----
T ss_pred ceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCC--CcEEEEECCEECCCCcc---ccccc-----
Confidence 345556543221 1223333222 2346889999999999999888 89999999988764432 11111
Q ss_pred eEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCee-------cCCCCce-------------EEEEeCC--
Q psy1095 226 VIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKD-------LTSDGRL-------------NIITVGG-- 283 (325)
Q Consensus 226 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-------~~~~~~~-------------~~~~~~~-- 283 (325)
...|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+... +..+... ..+..++
T Consensus 274 -~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~ 352 (404)
T 3p3y_A 274 -NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 352 (404)
T ss_dssp -GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEE
T ss_pred -CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEe
Confidence 1489999999999999999999999988888777775432111 1111111 0111111
Q ss_pred -------------EEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 284 -------------TSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 284 -------------~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
...|.|.++..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 353 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 353 LQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp GGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 12699999999999999999999999999999999864
No 17
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=224.78 Aligned_cols=243 Identities=23% Similarity=0.360 Sum_probs=178.5
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEee-CCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSK-DGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.+...|.+..+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.+++.+|+|.|+|.+.+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 5789999999999999999999999998775 899999 77777777787777767677899999999999999999999
Q ss_pred CCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 143 NYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 143 ~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
..+.. ...+.|.|... |.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............
T Consensus 82 ~~g~~~~~~~~l~v~~~------~~~~~~~~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~- 152 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQK------LTFREVVSPQEFKQGEDAEVVCRVSSSPA--PAVSWLYHNEEVTTISDNRFAMLAN- 152 (291)
T ss_dssp SSSCEEEEEEEEEEECC------CBCCSCCCSEEEETTSCEEECCCCBCSSC--CEEEEECC----CBCCCSSEEECTT-
T ss_pred ccCceEEEEEEEEecCC------cceEeCCCChhhcCCCCEEEEEEEccCCC--CEEEEEECCccccccCCceEEEccC-
Confidence 87754 45667777665 34444445667899999999999998887 8899999998776543333332222
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe--EEEEEEEeeCC--------------------------------
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT--SACLIVDVVKG-------------------------------- 267 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v~~~~~-------------------------------- 267 (325)
..|.|.+++.+|+|.|+|.+.|..+.... .+.+.+...+.
T Consensus 153 ------~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v 226 (291)
T 2wim_A 153 ------NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAI 226 (291)
T ss_dssp ------SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEE
T ss_pred ------CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeE
Confidence 36999999999999999999998755433 33444432221
Q ss_pred ------eecCCCCceEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 268 ------KDLTSDGRLNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 268 ------~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
..+..+.+.. .......|.|.++..+|+|.|+|.|.|..|..+.++.|.|..++.
T Consensus 227 ~W~~~g~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 227 SWFRNGKLIEENEKYI--LKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp EEEETTEECCCTTTEE--ECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred EEEECCEECcCCccEE--EcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 1111111111 111234799999999999999999999999999999999987763
No 18
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=7.5e-33 Score=253.02 Aligned_cols=284 Identities=18% Similarity=0.236 Sum_probs=206.7
Q ss_pred eeecccCCCCcccCCCC--CCCCCCCCCcccCCCCCCCcccccccccccc------cccCCCC-eeEecCCceEecCCCe
Q psy1095 12 SVKLTRPSGLMSGHSTP--RSTPRSTPPRSISPLSSRTFTPYSLNSAIRT------RRLTSSP-RFYAVPHNKICDLGDT 82 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~------~~~~~~p-~~~~~~~~~~v~~g~~ 82 (325)
.++|.+++..+...... ......|.|.+++.+|+|.|+|.+.+..+.. ..+..+| .+...|....+.+|+.
T Consensus 319 ~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 398 (642)
T 1e07_A 319 TYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVN 398 (642)
T ss_pred cEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCc
Confidence 57888887665443221 2235689999999999999999998876532 2223333 3455666778899999
Q ss_pred EEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEE--EEEEEECCCc
Q psy1095 83 VRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEAT--ARLEIMDPRA 160 (325)
Q Consensus 83 v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~l~v~~~~~ 160 (325)
+.|.|.+.+.|.+.++|++++..+... ..|.|.+++.+|+|.|+|.+.|..|....+ +.+.|...+
T Consensus 399 ~~l~C~~~g~p~~~i~W~~~g~~~~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~- 466 (642)
T 1e07_A 399 LSLSCHAASNPPAQYSWLIDGNIQQHT-----------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAEL- 466 (642)
T ss_pred EEEEEEcCccCCCeEEEEECCEEcCCC-----------ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccC-
Confidence 999999999999999999999887532 249999999999999999999988755443 445554431
Q ss_pred ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 161 IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 161 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
.+|.+.. .....+.+|+.+.|.|.+.+ ++ +.+.|++++..+....+.... .+ ...|.|.+++.+|+
T Consensus 467 --~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~--~~i~W~~~g~~l~~~~~~~~~--~~------~~~L~i~~v~~~d~ 532 (642)
T 1e07_A 467 --PKPSISS-NNSKPVEDKDAVAFTCEPEA-QN--TTYLWWVNGQSLPVSPRLQLS--NG------NRTLTLFNVTRNDA 532 (642)
T ss_pred --CCceEec-CCceeecCCCeEEEEEECCC-CC--cEEEEEECCEeCCCCCcEEEc--CC------CcEEEEeecChhcC
Confidence 2344433 33456789999999999983 55 899999999988765543221 22 25899999999999
Q ss_pred eEEEEEEEeCCCcEEe-EEEEEEEeeCCeecC--------CCCce------------E-EEEeCC-----EEEEEEcCCC
Q psy1095 241 GEFTCRVANELGEVVT-SACLIVDVVKGKDLT--------SDGRL------------N-IITVGG-----TSVLTIEDIT 293 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~--------~~~~~------------~-~~~~~~-----~~~l~i~~v~ 293 (325)
|.|+|.|.|..|.... .+.|.|...+..... .+... . .+..++ ...|.|.++.
T Consensus 533 G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~~L~i~~~~ 612 (642)
T 1e07_A 533 RAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKIT 612 (642)
T ss_pred ceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCceEEECccc
Confidence 9999999999887544 577777544331110 01111 1 122222 2479999999
Q ss_pred CCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 294 GDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 294 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
.+|+|.|+|.|.|..|..+.++.|.|+.
T Consensus 613 ~~d~G~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 613 PNNNGTYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred ccCCeEEEEEEEecccCcceeEEEEEEE
Confidence 9999999999999999999998888864
No 19
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.6e-32 Score=257.45 Aligned_cols=278 Identities=24% Similarity=0.295 Sum_probs=209.5
Q ss_pred CCCCCCcccCCCCCCCccccccccccc-----ccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIR-----TRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA 106 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~-----~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~ 106 (325)
..+|.|.+++.+|+|.|+|.+.+..+. ...+..+|.+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+
T Consensus 305 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~ 384 (816)
T 3dmk_A 305 SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAI 384 (816)
T ss_dssp TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEEC
T ss_pred cceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEEC
Confidence 457889999999999999999876543 234456777778888888999999999999999999999999999988
Q ss_pred CCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEE
Q psy1095 107 TPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFEC 186 (325)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C 186 (325)
.... ..|.|.+++.+|+|.|+|.+.|..+.......+.|... ..+|.+...+....+.+|+.+.|.|
T Consensus 385 ~~~~----------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~---~~~p~i~~~~~~~~v~~G~~v~L~C 451 (816)
T 3dmk_A 385 GHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGR---FDPPVIRQAFQEETMEPGPSVFLKC 451 (816)
T ss_dssp SCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCS---SCCCEEEEECCCEEECSSSCEEEEE
T ss_pred CCCC----------CEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccc---cCCCceEecCcceEEcCCCCEEEEE
Confidence 6432 35999999999999999999998887777777766532 2356777666777889999999999
Q ss_pred EEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 187 QVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 187 ~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
.+.+.|. +.+.|++++..+.............. .....+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 452 ~~~g~p~--p~v~W~~~g~~l~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 528 (816)
T 3dmk_A 452 VAGGNPT--PEISWELDGKKIANNDRYQVGQYVTV-NGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLP 528 (816)
T ss_dssp EEECSSC--CEEEEEETTEECCSCTTEEEEEEECT-TSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSC
T ss_pred EEecCCC--CEEEEEECCEECCCCCCcccccEEec-CCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCC
Confidence 9999888 89999999998876554332211110 11134679999999999999999999999988887777774322
Q ss_pred Ce------ecCCCCce------------E-EEEeC-------------CEEEEEEcCCC-CCCCeEEEEEEECCCee-EE
Q psy1095 267 GK------DLTSDGRL------------N-IITVG-------------GTSVLTIEDIT-GDDSGKYQVHVSNQHGS-DS 312 (325)
Q Consensus 267 ~~------~~~~~~~~------------~-~~~~~-------------~~~~l~i~~v~-~~d~G~Y~C~a~n~~g~-~~ 312 (325)
.. .+..+... . .+..+ ....|.|.++. .+|+|.|+|.|.|..|. ..
T Consensus 529 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~ 608 (816)
T 3dmk_A 529 YIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSAR 608 (816)
T ss_dssp EECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEE
T ss_pred eeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceee
Confidence 10 00000000 0 01111 12369999998 68999999999999995 45
Q ss_pred eEEEEEEecccCC
Q psy1095 313 CYASVAVEGRKII 325 (325)
Q Consensus 313 ~~~~l~V~~~p~i 325 (325)
..+.|.|..+|.|
T Consensus 609 ~~~~v~v~~~p~~ 621 (816)
T 3dmk_A 609 GSLEVQVMVLPRI 621 (816)
T ss_dssp EEEEEEEECCCCC
T ss_pred eeEEEEEecCCcc
Confidence 5688888877753
No 20
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=5.5e-34 Score=245.02 Aligned_cols=295 Identities=19% Similarity=0.226 Sum_probs=201.0
Q ss_pred eeeeccc-CCCCcccCCC--CCCCCCCCCCcccCCCC------CCCcccccccccccc------cccCCCCeeEecCCce
Q psy1095 11 LSVKLTR-PSGLMSGHST--PRSTPRSTPPRSISPLS------SRTFTPYSLNSAIRT------RRLTSSPRFYAVPHNK 75 (325)
Q Consensus 11 ~~~~~~~-~~~~~~~~~~--~~~~~~~l~i~~v~~~d------~G~Y~c~~~~~~~~~------~~~~~~p~~~~~~~~~ 75 (325)
..++|.+ ++..+..... ......+|.|.+++.+| +|.|+|.+.+..+.. +.+..+|.+...+...
T Consensus 34 p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~ 113 (388)
T 2v5m_A 34 PEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKE 113 (388)
T ss_dssp CEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCE
T ss_pred CEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccce
Confidence 3678888 4554443221 11244578999999998 999999998775532 2233566666667778
Q ss_pred EecCCCeEEEEEEEEecCC---CeeEEeeCCeeCCC-----CCcEEEEecCCeEEEEEccCCCCCC-eEEEEEEEeCCee
Q psy1095 76 ICDLGDTVRFQCSVTGQPA---PWTSWSKDGKPATP-----NARVTIREKEDLRFLEISEVTLEDA-GLYTIKVENNYGS 146 (325)
Q Consensus 76 ~v~~g~~v~l~C~~~~~p~---~~v~W~~~~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~-G~Y~C~~~~~~~~ 146 (325)
.+.+|+.+.|.|.+.+.+. +.+.|++++..+.. ..++.+... ..|.|.+++.+|+ |.|+|.+.+..+.
T Consensus 114 ~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~~G~Y~C~~~n~~~~ 190 (388)
T 2v5m_A 114 HVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS---GELHIREVGPEDGYKSYQCRTKHRLTG 190 (388)
T ss_dssp EEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTT---SCEEESSCCGGGGGCCEEEEEEETTTC
T ss_pred eeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccC---CcEEEecCCccccCeeEEEEeccCCCC
Confidence 8999999999999987543 78999999876532 234443322 3599999999999 9999999987532
Q ss_pred -EEEE---EEEEEECCCcccCCCee-eecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEecc----CCCCceEE
Q psy1095 147 -VEAT---ARLEIMDPRAIISRPKV-LNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKL----DSDMKPEV 217 (325)
Q Consensus 147 -~~~~---~~l~v~~~~~~~~~p~~-~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~----~~~~~~~~ 217 (325)
.... ..|.|..+... ..|.+ ........+.+|+.+.|.|.+.+.|. +.+.|++++..+.. .......
T Consensus 191 ~~~~~~~~~~l~v~~~~~~-~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~~~~~~~~~~~~~~~~~~~~- 266 (388)
T 2v5m_A 191 ETRLSATKGRLVITEPISS-SAPRTPALVQKPLELMVAHTISLLCPAQGFPA--PSFRWYKFIEGTTRKQAVVLNDRVK- 266 (388)
T ss_dssp CEEECSSCBCEEEECCCSC-EEEECCSSCCCCEEEETTSCEEECCCCEEESC--CEEEEEEECTTSSCEEECCCSSSEE-
T ss_pred ceeeccccceEEEecCCcC-CCCcCccccCCceEEeeCCcEEEEEECCCCCC--CEEEEEecCCCCcccccccccCcee-
Confidence 2211 24555543111 01111 11123456788999999999999988 89999997533211 0011111
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCee-------cCCCCceE-------------
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKD-------LTSDGRLN------------- 277 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-------~~~~~~~~------------- 277 (325)
... ..|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+... +..+....
T Consensus 267 ~~~-------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 339 (388)
T 2v5m_A 267 QVS-------GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTV 339 (388)
T ss_dssp EET-------TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEE
T ss_pred ccc-------CEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeE
Confidence 112 489999999999999999999999988888888775433211 11111111
Q ss_pred EEEeC------CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEE
Q psy1095 278 IITVG------GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAV 319 (325)
Q Consensus 278 ~~~~~------~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 319 (325)
.+..+ +...|.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 340 ~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 340 SWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCEECccCCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 11122 2357999999999999999999999999999999987
No 21
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=8.9e-33 Score=227.39 Aligned_cols=238 Identities=20% Similarity=0.425 Sum_probs=191.3
Q ss_pred eeeecccCCCCcccCCCCC----CCCCCCCCcccCCCCCCCccccccccccc-----ccccCCCCeeEecCC-ceEecCC
Q psy1095 11 LSVKLTRPSGLMSGHSTPR----STPRSTPPRSISPLSSRTFTPYSLNSAIR-----TRRLTSSPRFYAVPH-NKICDLG 80 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~----~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~-----~~~~~~~p~~~~~~~-~~~v~~g 80 (325)
..++|.+++..+......+ ....+|.|.+++.+|+|.|+|.+.+..+. ...+..+|.+...+. ...+.+|
T Consensus 35 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g 114 (284)
T 2rik_A 35 IKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQD 114 (284)
T ss_dssp CEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETT
T ss_pred CEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCC
Confidence 3677887776655432211 12357889999999999999999775443 234457787766544 4568899
Q ss_pred CeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCc
Q psy1095 81 DTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRA 160 (325)
Q Consensus 81 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 160 (325)
+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.+++.+|+|.|+|.+.|..+.....+.|.|..+
T Consensus 115 ~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-- 192 (284)
T 2rik_A 115 EHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEP-- 192 (284)
T ss_dssp CCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECC--
T ss_pred ceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecC--
Confidence 999999999999999999999999998877777766677788999999999999999999999988888888988876
Q ss_pred ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 161 IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 161 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
|.+...+....+..|+.+.|.|.+.+.|+ +.+.|++++..+......... ..+ ....|.|.+++.+|+
T Consensus 193 ----p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~~~~--~~~----~~~~L~i~~v~~~d~ 260 (284)
T 2rik_A 193 ----PVFRKKPHPVETLKGADVHLECELQGTPP--FQVSWHKDKRELRSGKKYKIM--SEN----FLTSIHILNVDSADI 260 (284)
T ss_dssp ----CBCCSCCCCEEECTTCCEEEEEECBSSSC--CEEEEEETTEEECBTTTEEEE--EET----TEEEEEECSCCGGGC
T ss_pred ----CcceeCCCcceecCCCeEEEEEEEEecCC--CEEEEEECCEECcCCCCEEEE--EcC----CEEEEEEcCCCcccC
Confidence 44444445667889999999999999888 899999999998766554332 222 346899999999999
Q ss_pred eEEEEEEEeCCCcEEeEEEEEE
Q psy1095 241 GEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
|.|+|.|.|..|.....+.|.|
T Consensus 261 G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 261 GEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCceeEEEEEEE
Confidence 9999999999999988888877
No 22
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.9e-32 Score=249.18 Aligned_cols=275 Identities=17% Similarity=0.246 Sum_probs=197.9
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccccc-------cccCC---CCeeEecCCceEecCCC
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-------RRLTS---SPRFYAVPHNKICDLGD 81 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-------~~~~~---~p~~~~~~~~~~v~~g~ 81 (325)
.++|.+++..+. ....|.|.+++.+|+|.|+|.+.+..+.. ..+.. +|.+. .+....+..|+
T Consensus 234 ~i~W~~~g~~i~-------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~~~~g~ 305 (642)
T 1e07_A 234 QYSWFVNGTFQQ-------STQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFIT-SNNSNPVEDED 305 (642)
T ss_pred EEEEEECCeEcc-------cCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEE-cCCceeEecCC
Confidence 566776665542 23578999999999999999998765422 12222 23333 23334466688
Q ss_pred eEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEEEEEEECCCc
Q psy1095 82 TVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV-EATARLEIMDPRA 160 (325)
Q Consensus 82 ~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~ 160 (325)
.+.|.|.+.+.| +.+.|++++..+....++.+... ...|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|...|.
T Consensus 306 ~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~ 382 (642)
T 1e07_A 306 AVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSND--NRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPD 382 (642)
T ss_pred cEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCC--CCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCC
Confidence 899999998876 68999999998877666665433 3479999999999999999999988753 3457777776532
Q ss_pred ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 161 IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 161 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
. + ...+....+.+|+.+.|.|.+.+.|+ +.+.|+++|..+... ..|.|.+++.+|+
T Consensus 383 ~---~--~~~~~~~~~~~g~~~~l~C~~~g~p~--~~i~W~~~g~~~~~~-----------------~~L~i~~~~~~d~ 438 (642)
T 1e07_A 383 D---P--TISPSYTYYRPGVNLSLSCHAASNPP--AQYSWLIDGNIQQHT-----------------QELFISNITEKNS 438 (642)
T ss_pred C---C--eecCCceEecCCCcEEEEEEcCccCC--CeEEEEECCEEcCCC-----------------ceEEEccCChhhC
Confidence 1 1 22334567889999999999999888 899999999876421 3699999999999
Q ss_pred eEEEEEEEeCCCcEEeEEEEEEEee---------------------------------------CCeecCCCCceEEEEe
Q psy1095 241 GEFTCRVANELGEVVTSACLIVDVV---------------------------------------KGKDLTSDGRLNIITV 281 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~~~~l~v~~~---------------------------------------~~~~~~~~~~~~~~~~ 281 (325)
|.|+|.|.|..|....+..+.+... ++..+..+.+..+ .
T Consensus 439 G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~~~~~i~W~~~g~~l~~~~~~~~--~ 516 (642)
T 1e07_A 439 GLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQL--S 516 (642)
T ss_pred eEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCCCCcEEEEEECCEeCCCCCcEEE--c
Confidence 9999999999876654433333221 1111111111111 1
Q ss_pred CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEe-EEEEEEeccc
Q psy1095 282 GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSC-YASVAVEGRK 323 (325)
Q Consensus 282 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p 323 (325)
.+...|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|
T Consensus 517 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p 559 (642)
T 1e07_A 517 NGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGP 559 (642)
T ss_pred CCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCC
Confidence 22357999999999999999999999997654 6889988655
No 23
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=243.57 Aligned_cols=280 Identities=16% Similarity=0.195 Sum_probs=184.9
Q ss_pred CCCCCcccCCCCCCCccccccccccc--------cccc----CCCCeeEecCCceEecCCCeEEEEEEEEecCCC--eeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR--------TRRL----TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAP--WTS 98 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~--------~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~--~v~ 98 (325)
.+|.|.+++.+|+|.|+|.+.+..+. ...+ ..+|.+...+....+.+|+.+.|.|.+.+.|.+ .++
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 149 (523)
T 2rcj_C 70 ASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVA 149 (523)
T ss_pred EEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEE
Confidence 36899999999999999999875421 2233 356777777777777889999999999987654 899
Q ss_pred EeeCCeeCCCCCcEEE--EecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCc
Q psy1095 99 WSKDGKPATPNARVTI--REKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLE 172 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~--~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~ 172 (325)
|+|++..+........ ...++ ...|.|.+++.+|+|.|+|.+.|..+.....+.+.+... ...+|.+.....
T Consensus 150 W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~--~~~~P~v~~~~~ 227 (523)
T 2rcj_C 150 WKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSA--STKGPSVFPLAP 227 (523)
T ss_pred EecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCC--CCcCCEEEecCC
Confidence 9999988865432211 11111 136999999999999999999998776555444332211 123455543333
Q ss_pred CeeEecCCcEEEEEEEEec-CCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 173 NLRCCDGDSVTFECQVQVV-PPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
...+.+|+.+.|.|.+.+. |.+ ..+.|++++..+........ ...+..+...+.|.|.++..+| |.|+|.|.|..
T Consensus 228 ~~~~~~G~~~~l~C~~~g~~P~p-~~v~W~k~g~~~~~~~~~~~--~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~ 303 (523)
T 2rcj_C 228 SSKSTSGGTAALGCLVKDYFPQP-VTVSWNSGALTSGVHTFPAV--LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 303 (523)
T ss_pred CcccccCCceEEEEEEeceeCCC-eEEEEecCCcccceEeCCcE--ecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCC
Confidence 4456789999999999887 541 38999999877532211111 1222223345689999999999 99999999998
Q ss_pred CcEEeEEEEEEEeeC------C--ee-cC-----------C-----CCceEE-EEe-----------------CC----E
Q psy1095 252 GEVVTSACLIVDVVK------G--KD-LT-----------S-----DGRLNI-ITV-----------------GG----T 284 (325)
Q Consensus 252 ~~~~~~~~l~v~~~~------~--~~-~~-----------~-----~~~~~~-~~~-----------------~~----~ 284 (325)
|.......|.+...+ + .. +. . +....+ +.. ++ .
T Consensus 304 g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~ 383 (523)
T 2rcj_C 304 SNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVV 383 (523)
T ss_pred CCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEE
Confidence 875544443321100 0 00 10 0 000111 111 11 1
Q ss_pred EEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEE
Q psy1095 285 SVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVA 318 (325)
Q Consensus 285 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 318 (325)
..|.|.++..+|+|.|+|.|.|..|.......|.
T Consensus 384 s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 384 SVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred EEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEE
Confidence 3488888999999999999999988766555554
No 24
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=9.6e-32 Score=243.14 Aligned_cols=278 Identities=17% Similarity=0.159 Sum_probs=183.9
Q ss_pred CCCCcccCCCCCCCcccccccccccccccCCCCeeE-ecCCceEecCCCeEEEEEEEEecCC---CeeEEe-eCCeeC--
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIRTRRLTSSPRFY-AVPHNKICDLGDTVRFQCSVTGQPA---PWTSWS-KDGKPA-- 106 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~---~~v~W~-~~~~~~-- 106 (325)
+|.|.+++.+|+|.|+|.+.+..+...... .-.+. ..|....+.+|+.+.|.|.+ +.+. +.+.|+ +++...
T Consensus 186 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~-~l~V~~~~p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~ 263 (585)
T 2ocw_A 186 SVVINQLRLSDAGQYLCQAGDDSNSNKKNA-DLQVLKPEPELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDV 263 (585)
T ss_pred EEEEccCChhHCeEEEEEeccCCccccceE-EEEEccCCCceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcce
Confidence 689999999999999999987655321100 00011 12444567899999999997 4443 678886 777321
Q ss_pred --C--------CCCcEEEEec--CCeEEEEEccCCCCCCeEEEEEEEeCCeeE----EEEEEEEEECCCcccCCCeeeec
Q psy1095 107 --T--------PNARVTIREK--EDLRFLEISEVTLEDAGLYTIKVENNYGSV----EATARLEIMDPRAIISRPKVLNG 170 (325)
Q Consensus 107 --~--------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~l~v~~~~~~~~~p~~~~~ 170 (325)
. ...++.+... ++...|.|.+++.+|+|.|+|.+.|..... ...+.|.|... |.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~------p~~~~~ 337 (585)
T 2ocw_A 264 VVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEE------STIPRS 337 (585)
T ss_pred EEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecc------cccccC
Confidence 1 1234443322 333479999999999999999999854332 16777888765 334444
Q ss_pred CcCeeEecCCcEEEEEEEEecCCCCCee----EEee--CCE--EeccCC-------CCceEEEecCCcceeEEEEEeCCC
Q psy1095 171 LENLRCCDGDSVTFECQVQVVPPNDHDI----SWFR--NNR--LIKLDS-------DMKPEVQVDSKENLVIARLKIPHV 235 (325)
Q Consensus 171 ~~~~~v~~g~~v~l~C~~~~~~~~~~~~----~W~~--~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~l~i~~~ 235 (325)
+....+.+|+.+.|.|.+.+.|. +.+ .|++ ++. .+.... ..+...... .......|.|.++
T Consensus 338 ~~~~~~~~G~~v~l~C~~~~~p~--p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~--~~~g~~~L~I~~v 413 (585)
T 2ocw_A 338 PTVVKGVAGSSVAVLCPYNRKES--KSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE--PGNGTFTVILNQL 413 (585)
T ss_pred CcceEEEeCCcEEEEEecCCCCC--ccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEecc--CCCcEEEEEECCC
Confidence 55677889999999999998887 544 8999 776 443211 111111100 0012346999999
Q ss_pred CCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeecC---------------------------------CCCceE-----
Q psy1095 236 YPEDEGEFTCRVANELGEVVTSACLIVDVVKGKDLT---------------------------------SDGRLN----- 277 (325)
Q Consensus 236 ~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~---------------------------------~~~~~~----- 277 (325)
+.+|+|.|+|.| |..+.....+.|.|...++.... .++...
T Consensus 414 ~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~ 492 (585)
T 2ocw_A 414 TSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQD 492 (585)
T ss_pred ChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccC
Confidence 999999999999 88887777777777432111000 000000
Q ss_pred ------EEE---eCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeE-EEEEEecccC
Q psy1095 278 ------IIT---VGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCY-ASVAVEGRKI 324 (325)
Q Consensus 278 ------~~~---~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~ 324 (325)
... .+....|.|.++..+|+|.|+|.|.|..|..... +.|.|+++|+
T Consensus 493 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p~ 549 (585)
T 2ocw_A 493 EGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERKA 549 (585)
T ss_pred CCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeeee
Confidence 000 1122589999999999999999999999976654 8999998873
No 25
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=4.9e-32 Score=226.45 Aligned_cols=242 Identities=20% Similarity=0.285 Sum_probs=172.8
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|... ....+.+|+++.|.|.+.+. |.+.+.|++++..+....++... .+...|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~P~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n 82 (317)
T 2y25_A 6 TGPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKD 82 (317)
T ss_dssp SCCEEEEE-EEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEES
T ss_pred CCCcEeee-eeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEEEC
Confidence 46787744 45789999999999999886 78899999999998866665543 3346899999999999999999999
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEe----------cCCCCCeeEEeeCCEEeccCCC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQV----------VPPNDHDISWFRNNRLIKLDSD 212 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~----------~~~~~~~~~W~~~~~~~~~~~~ 212 (325)
..+.....+.|.|... |.+........+..|+.+.|.|.+.+ .|. +.+.|++++..+..+.+
T Consensus 83 ~~g~~~~~~~l~v~~~------~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~--~~i~W~~~~~~~~~~~~ 154 (317)
T 2y25_A 83 DRGKDKSRLKLVDEAF------KELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVED--LKVNWSHNGSAIRYSDR 154 (317)
T ss_dssp SSCEEEEEECCSTHHH------HHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSS--CEEEEEESSSBCCCCSS
T ss_pred CCCcEEEEEEEEEecC------ccccccCCceecccCCCeEEEeeccccEEEEEeccCCCC--cEEEEEECCEECCCCCC
Confidence 8887665555444332 11111112233445666666666655 455 89999999988876544
Q ss_pred CceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE------------------------------
Q psy1095 213 MKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV------------------------------ 262 (325)
Q Consensus 213 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v------------------------------ 262 (325)
.... ..+ ....|.|.+++.+|+|.|+|.|.|..+.....+.|.+
T Consensus 155 ~~~~--~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 228 (317)
T 2y25_A 155 VKTG--VTG----EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL 228 (317)
T ss_dssp EEEE--ECS----SEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBC
T ss_pred eEEe--ccC----CEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccC
Confidence 3322 333 3467999999999999999999998876655544432
Q ss_pred ---------------------------EeeCCeecCCCCceEEEEe-CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeE
Q psy1095 263 ---------------------------DVVKGKDLTSDGRLNIITV-GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCY 314 (325)
Q Consensus 263 ---------------------------~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 314 (325)
|.+.+..+..+.+..+... ++...|.|.++..+|+|.|+|.|.|..|..+.+
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 308 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSD 308 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEE
Confidence 2222333333333333333 445689999999999999999999999999999
Q ss_pred EEEEEecc
Q psy1095 315 ASVAVEGR 322 (325)
Q Consensus 315 ~~l~V~~~ 322 (325)
+.|.|..+
T Consensus 309 ~~l~V~~P 316 (317)
T 2y25_A 309 FTVSVFIP 316 (317)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999754
No 26
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=4.7e-30 Score=213.30 Aligned_cols=242 Identities=26% Similarity=0.376 Sum_probs=184.9
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCC-CcEEEEe-cCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPN-ARVTIRE-KEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+.. .++...|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 5799999999999999999999999999999999999999988654 3454433 4556789999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
|..+.....+.|.|...+.. ..|..........+..|+.+.|.|.+.+.|. +.+.|++++..+......... ..+
T Consensus 83 n~~g~~~~~~~l~V~~~p~~-~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~--~~~ 157 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKI-HLPKTLEGMGAVHALRGEVVSIKIPFSGKPD--PVITWQKGQDLIDNNGHYQVI--VTR 157 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEE-CCCHHHHSSCCEEEETTCCEEEEEEEEEESC--CEEEEEESSSBCCSSSSCEEE--ECS
T ss_pred cCCCCccceEEEEEecCCcc-CCCccccccccEEecCCCEEEEEEEECCCCC--CEEEEEECCEECCCCCcEEEE--EcC
Confidence 99988888888888765332 1222223334567888999999999999988 899999999887655444332 222
Q ss_pred CcceeEEEEEeCC-CCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeecC-------------------CCCc------
Q psy1095 222 KENLVIARLKIPH-VYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKDLT-------------------SDGR------ 275 (325)
Q Consensus 222 ~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~-------------------~~~~------ 275 (325)
....|.|.+ +..+|.|.|+|.|.|..|.....+.|.|...+..+.. .++.
T Consensus 158 ----~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y 233 (305)
T 2nzi_A 158 ----SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNY 233 (305)
T ss_dssp ----SEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEE
T ss_pred ----CceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEE
Confidence 246899999 9999999999999999999888888888654432110 1111
Q ss_pred -----------eEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeE
Q psy1095 276 -----------LNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCY 314 (325)
Q Consensus 276 -----------~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 314 (325)
+..........|.|.++...+.|.|+|.|.|..|....+
T Consensus 234 ~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 234 IVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp EEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred EEEEecCCCCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 000111112468999999999999999999999987654
No 27
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.98 E-value=1.8e-32 Score=233.59 Aligned_cols=262 Identities=13% Similarity=0.144 Sum_probs=184.6
Q ss_pred CCCCCCcccCCCCCCCcccccccccccccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCc
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRTRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNAR 111 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~ 111 (325)
..+|.|.+++++|+|.|+|.+.+... ...+... .+...|. ..+.+|+++.|.|.+.+.|.|.+.|++++..+.
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~n~~~-~~~l~V~-~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~---- 138 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDTYICEVEDQKE-EVQLLVF-GLTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI---- 138 (363)
T ss_dssp CCCEEECSCCGGGCEEEEEEETTEEE-EEEEEEE-EEEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCEE----
T ss_pred eEEEEECCCCHHHCEEEEEEEEECCC-cEEEEEE-eCCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc----
Confidence 55799999999999999999988743 1111110 1333333 357899999999999889999999999875431
Q ss_pred EEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEe-
Q psy1095 112 VTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQV- 190 (325)
Q Consensus 112 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~- 190 (325)
. ....|.|.+++.+|+|.|+|.+.+..+.....+.+.|...+.. + ....+.+|+.+.|.|.+.+
T Consensus 139 ---~---~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~---~------~~~~~~~G~~v~l~C~~~~~ 203 (363)
T 1wio_A 139 ---Q---GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA---S------SIVYKKEGEQVEFSFPLAFT 203 (363)
T ss_dssp ---E---ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS---E------EEEEEETBCCEEEECCCCCC
T ss_pred ---c---cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC---C------CceEEecCCEEEEEEEEecc
Confidence 1 1246999999999999999999998777777777777654321 1 3456788999999998877
Q ss_pred ----cCCCCCeeEEeeCCEEeccC--------CCCceEEEecCC----cceeEEEEEeCCCCCCCCeEEEEEEEeC--CC
Q psy1095 191 ----VPPNDHDISWFRNNRLIKLD--------SDMKPEVQVDSK----ENLVIARLKIPHVYPEDEGEFTCRVANE--LG 252 (325)
Q Consensus 191 ----~~~~~~~~~W~~~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~ 252 (325)
.|. +.+.|++++..+... ............ .......|.|.+++.+|+|.|+|.|.|. .|
T Consensus 204 ~~~~~P~--p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g 281 (363)
T 1wio_A 204 VEKLTGS--GELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTG 281 (363)
T ss_dssp CCSSCEE--EEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTC
T ss_pred cccCCCc--eeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcC
Confidence 555 789999998876542 211111000000 0001248999999999999999999999 99
Q ss_pred cEEeEEEEEEEeeCCeecC--------CCCc--eEEEEeCC-----EEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEE
Q psy1095 253 EVVTSACLIVDVVKGKDLT--------SDGR--LNIITVGG-----TSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASV 317 (325)
Q Consensus 253 ~~~~~~~l~v~~~~~~~~~--------~~~~--~~~~~~~~-----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 317 (325)
.....+.|.|....+..+. +... +. +..++ ...|.|.++..+|+|.|+|.|.|. |....+..|
T Consensus 282 ~~~~~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~-W~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~ 359 (363)
T 1wio_A 282 KLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLS-LKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNI 359 (363)
T ss_dssp CEEEEEEEEEEEECCCSSSEEEEEESSCCTTCCEE-EECSSSSCSEEESSSEEEESSCCSEEEEEEECSS-SSCCEEEEE
T ss_pred eEEEEEeEEEEEecCCCeeEEEEEccccCCCccEE-EEeCCCceeeeeeeeeeeeccccceeEEEEEecC-CeEEEecce
Confidence 8888888888755544332 1111 22 22222 345888999999999999999964 555555666
Q ss_pred EE
Q psy1095 318 AV 319 (325)
Q Consensus 318 ~V 319 (325)
.|
T Consensus 360 ~V 361 (363)
T 1wio_A 360 KV 361 (363)
T ss_dssp EE
T ss_pred Ee
Confidence 55
No 28
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.98 E-value=3.9e-31 Score=226.94 Aligned_cols=231 Identities=23% Similarity=0.342 Sum_probs=175.3
Q ss_pred eeeecccCCCCcccCCC--CCCCCCCCCCcccCCCCCCCccccccccccccccc---------------CCCCeeE-ecC
Q psy1095 11 LSVKLTRPSGLMSGHST--PRSTPRSTPPRSISPLSSRTFTPYSLNSAIRTRRL---------------TSSPRFY-AVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~~---------------~~~p~~~-~~~ 72 (325)
+.++|..++........ .......|.|.+++.+|+|.|+|.+.+........ ..+|.+. ..|
T Consensus 133 ~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~ 212 (384)
T 3kld_A 133 LSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFP 212 (384)
T ss_dssp EEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECC
T ss_pred eEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCC
Confidence 45677766543322111 12234578999999999999999998765432111 1223332 345
Q ss_pred CceEecCCCeEEEEEEEEecCCCeeEEeeC-CeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 73 HNKICDLGDTVRFQCSVTGQPAPWTSWSKD-GKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....+ . ......|.|.+++.+|+|.|+|.+.|..|......
T Consensus 213 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 288 (384)
T 3kld_A 213 ETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR--R--HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKG 288 (384)
T ss_dssp SEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCE--E--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccce--e--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEE
Confidence 667788999999999999999999999995 444443221 1 12335799999999999999999999999888888
Q ss_pred EEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEE
Q psy1095 152 RLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLK 231 (325)
Q Consensus 152 ~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (325)
.|.|... |.+...+....+..|+.+.|.|.+.|.|. +.+.|++++..+....+... .. ..|.
T Consensus 289 ~l~v~~~------P~~~~~~~~~~v~~g~~v~l~C~~~g~P~--p~i~W~k~g~~l~~~~~~~~---~~-------~~L~ 350 (384)
T 3kld_A 289 QLTFYAQ------PNWVQIINDIHVAMEESVFWECKANGRPK--PTYRWLKNGDPLLTRDRIQI---EQ-------GTLN 350 (384)
T ss_dssp EEEEEEE------EEEEECCCCEEECTTCCEEEECEEEEESC--CEEEEEETTEECCCBTTEEE---ET-------TEEE
T ss_pred EEEEecC------CccccCCCceEecCCCCEEEEeECCccCC--CeEEEEECCEECCCCccEEE---eC-------CEEE
Confidence 8888764 55555566778899999999999999998 89999999998865444321 22 3799
Q ss_pred eCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 232 IPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 232 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 351 i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 351 ITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 99999999999999999999999999999883
No 29
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.98 E-value=1.3e-30 Score=235.66 Aligned_cols=275 Identities=17% Similarity=0.174 Sum_probs=186.8
Q ss_pred CCCCcccCCCCCCCccccccccccc-----ccccCCCCeeEecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCCeeCC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR-----TRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDGKPAT 107 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~-----~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~ 107 (325)
+|.|.+++.+|+|.|+|.+.+.... .+.+..+|.+...+....+.+|+++.|.|.+.+. |.+.+.|+|++....
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~ 155 (585)
T 2ocw_A 76 VVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYP 155 (585)
T ss_pred EEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCc
Confidence 5889999999999999998765432 2445578888888888899999999999999864 467899999875421
Q ss_pred C-------------CCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecC
Q psy1095 108 P-------------NARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGL 171 (325)
Q Consensus 108 ~-------------~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~ 171 (325)
. ..++.+...+ +..+|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+ |.
T Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~-----p~----- 225 (585)
T 2ocw_A 156 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE-----PE----- 225 (585)
T ss_pred eEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC-----Cc-----
Confidence 0 2344443322 23479999999999999999999988887778888887541 22
Q ss_pred cCeeEecCCcEEEEEEEEecCCCCCeeEEe-eCCE---EeccCC-------CCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPNDHDISWF-RNNR---LIKLDS-------DMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~-~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
...+.+|+.+.|.|.+.+.++..+.+.|+ +++. .+.... ..+...... .......|.|.+++.+|+
T Consensus 226 -~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~L~i~~v~~~d~ 302 (585)
T 2ocw_A 226 -LVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQ--DKDGSFSVVITGLRKEDA 302 (585)
T ss_pred -eeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeecc--CCCcEEEEEEccCChhhC
Confidence 33567899999999974333222678886 7773 121110 111111110 001234799999999999
Q ss_pred eEEEEEEEeCCCcEE----eEEEEEEEeeCCeecC---------------------C--------------CC-------
Q psy1095 241 GEFTCRVANELGEVV----TSACLIVDVVKGKDLT---------------------S--------------DG------- 274 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~----~~~~l~v~~~~~~~~~---------------------~--------------~~------- 274 (325)
|.|+|.|.|..+... ..+.|.|...+..... . ++
T Consensus 303 G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~ 382 (585)
T 2ocw_A 303 GRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVD 382 (585)
T ss_pred EEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeee
Confidence 999999999533321 4455555322110000 0 11
Q ss_pred -----------ceEEEE--eCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 275 -----------RLNIIT--VGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 275 -----------~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
++.+.. .++..+|.|.++..+|+|.|+|.| |..|.....+.|.|...
T Consensus 383 ~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~ 442 (585)
T 2ocw_A 383 SEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEG 442 (585)
T ss_pred ecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecC
Confidence 111110 122345999999999999999999 99999999999999763
No 30
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=3.8e-31 Score=231.75 Aligned_cols=274 Identities=12% Similarity=0.118 Sum_probs=188.0
Q ss_pred CCCCCcccCCCCCCCccccccccccc-----ccccCCCCeeE-ecCCceEecCCCeEEEEEEEEecCCC---eeEEeeCC
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR-----TRRLTSSPRFY-AVPHNKICDLGDTVRFQCSVTGQPAP---WTSWSKDG 103 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~-----~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~~~~ 103 (325)
..|.|.+++. |+| |+|.+.+.... ...+..+|.+. ..|.+..+.+|+++.|.|.+.+.|.+ .|+|+|++
T Consensus 50 ~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g 127 (450)
T 1z7z_I 50 KVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (450)
T ss_dssp EEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETT
T ss_pred eEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCC
Confidence 4778999988 999 99999643321 22333456554 66777889999999999999998877 89999999
Q ss_pred eeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEE--------EEEEEEEECCCcccCCCeeeecCcCee
Q psy1095 104 KPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVE--------ATARLEIMDPRAIISRPKVLNGLENLR 175 (325)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--------~~~~l~v~~~~~~~~~p~~~~~~~~~~ 175 (325)
..+...... .......|.|.+++.+|+|.|+|.+.|..+... ....+.|...+ ..+|.+.. ...
T Consensus 128 ~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~--~~~p~~~~---~~~ 199 (450)
T 1z7z_I 128 KELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLP--ATPPQLVS---PRV 199 (450)
T ss_dssp EEEEEEECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCC--SSCCEEEC---CSE
T ss_pred EEeeccccc---ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccC--CCCCEecC---cee
Confidence 877532211 122345799999999999999999998755211 23344444321 12344322 257
Q ss_pred EecCCcEEEEEEEEec-CCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCe--EEEEEEEeCCC
Q psy1095 176 CCDGDSVTFECQVQVV-PPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEG--EFTCRVANELG 252 (325)
Q Consensus 176 v~~g~~v~l~C~~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G--~Y~C~~~~~~~ 252 (325)
+.+|+.+.|.|.+.+. |...+.+.|++++..+... .. ..+. .....+.+ +++.+|+| .|+|.+.|..+
T Consensus 200 v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~----~~--~~~~--~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g 270 (450)
T 1z7z_I 200 LEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT----VT--YGND--SFSAKASV-SVTAEDEGTQRLTCAVILGNQ 270 (450)
T ss_dssp EETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCE----EE--EETT--EEEEEEEE-ECCGGGCEEEEEEEEEEETTE
T ss_pred EEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCce----EE--ecCC--ceeEEEEE-EeEhhhCCcEEEEEEEccCCc
Confidence 8899999999999988 5222899999999887641 11 1111 01122333 77899999 99999999999
Q ss_pred cEEeEEEEEEEeeCCeecC-------CCCceEE-----------------EEeCCEEEEEEcCCCCCCCeEEEEEEECCC
Q psy1095 253 EVVTSACLIVDVVKGKDLT-------SDGRLNI-----------------ITVGGTSVLTIEDITGDDSGKYQVHVSNQH 308 (325)
Q Consensus 253 ~~~~~~~l~v~~~~~~~~~-------~~~~~~~-----------------~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 308 (325)
.....+.|.|...+.+.+. .+..+.+ ...+....|.|..+..+|+|.|+|.|.|..
T Consensus 271 ~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l~C~~~p~p~i~W~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 350 (450)
T 1z7z_I 271 SQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEV 350 (450)
T ss_dssp EEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEEC----------------CCCCCEEEECCGGGTTCEEEEEEEEEE
T ss_pred cEEEEEEEEEecCCCCeEecCCeeEeCCCcEEEEEecCCCCEeEECCEEcCCCCceEEEEEecCcccCCceEEEEEEcCC
Confidence 8888888888653332221 1111111 111223469999999999999999999866
Q ss_pred e----eEEeEEEEEEecccCC
Q psy1095 309 G----SDSCYASVAVEGRKII 325 (325)
Q Consensus 309 g----~~~~~~~l~V~~~p~i 325 (325)
| .....+.|.|..+|.|
T Consensus 351 ~g~~~~~~~~~~l~V~~~P~~ 371 (450)
T 1z7z_I 351 AGQLIHKNQTRELRVLYGPRL 371 (450)
T ss_dssp TTEEEEEEEEEECEEEEEEEC
T ss_pred CCcccccceeEEEEEecCCce
Confidence 5 4457789999888754
No 31
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=2.3e-29 Score=216.29 Aligned_cols=243 Identities=19% Similarity=0.365 Sum_probs=182.8
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeC--CeeCCC-----CCcEEEEecCCeEEEEEccCCCCCCeEEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKD--GKPATP-----NARVTIREKEDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 137 (325)
+|.|.. +.+..+.+|+++.|.|.+.|.|.+.++|+|+ +..+.. ..++.+........|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 467766 5667788899999999999999999999999 887754 35666666566788999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 138 IKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
|.+.|..|.....+.|.|..+ |.+........+..|+.+.|.|.+.+.|+ +.+.|++++..+..........
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~------P~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~i~W~~~g~~l~~~~~~~~~~ 151 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYA------PKFISNQTIYYSWEGNPINISCDVKSNPP--ASIHWRRDKLVLPAKNTTNLKT 151 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEE------EEECCSCCEEEECTTCCEEEEECEEEESC--CEEEEEETTEESSCTTCTTEEE
T ss_pred EEEEeCCCCcceEEEEEEEeC------CEEecCcceEEeccCCEEEEEEEEEecCC--CeEEEEECCccCCcccCceEEE
Confidence 999999998888888998865 34433333346788999999999999998 8999999999887655333332
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCee--c------------------CCCC-c-
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKD--L------------------TSDG-R- 275 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~--~------------------~~~~-~- 275 (325)
...+ ....|.|.++..+|+|.|+|.|.|..|.....+.+.+...+..+ + ..++ .
T Consensus 152 ~~~~----~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi 227 (389)
T 2jll_A 152 YSTG----RKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPI 227 (389)
T ss_dssp EECS----SCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCE
T ss_pred eccC----CEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcce
Confidence 2332 34689999999999999999999999988776666553222211 0 0111 1
Q ss_pred --eEEEE-------------eCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 276 --LNIIT-------------VGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 276 --~~~~~-------------~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
+.+.. ......|.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 228 ~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~ 287 (389)
T 2jll_A 228 HHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQ 287 (389)
T ss_dssp EEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred EEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEE
Confidence 11111 1122479999999999999999999999977655444443
No 32
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.1e-30 Score=214.27 Aligned_cols=239 Identities=17% Similarity=0.278 Sum_probs=169.4
Q ss_pred ceEecCCCeEEEEEEEE-ecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy1095 74 NKICDLGDTVRFQCSVT-GQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATAR 152 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 152 (325)
...+.+|+.+.|.|... +.|.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+.|..+... +..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 45688999999999875 5788999999999999888888888777778999999999999999999998776433 444
Q ss_pred EEEECCCccc------CCCeeeecCc-CeeEecCCcEEEEEEEE-ecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcc
Q psy1095 153 LEIMDPRAII------SRPKVLNGLE-NLRCCDGDSVTFECQVQ-VVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKEN 224 (325)
Q Consensus 153 l~v~~~~~~~------~~p~~~~~~~-~~~v~~g~~v~l~C~~~-~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
+.|....... .+|.+..... ...+.+|+.+.|.|.+. +.|. +.+.|++++..+....++.......+
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~--~~v~W~~~~~~i~~~~~~~~~~~~~~--- 163 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGN--AKVNYIFNEKEIFEGPKYKMHIDRNT--- 163 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSS--CEEEEEETTEEECSSSSCEEEEETTT---
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCC--CEEEEEECCEECeeCCcEEEEEccCC---
Confidence 5543210000 0233333222 56788999999999998 6676 89999999999877655443322112
Q ss_pred eeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE-------------------------------------------E
Q psy1095 225 LVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL-------------------------------------------I 261 (325)
Q Consensus 225 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l-------------------------------------------~ 261 (325)
....|.|.+++.+|+|.|+|.+.+..........+ .
T Consensus 164 -~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~ 242 (312)
T 2y23_A 164 -GIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLK 242 (312)
T ss_dssp -TEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEE
T ss_pred -CEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEE
Confidence 34679999999999999999997654433221111 1
Q ss_pred E------------EeeCCeecCCCCceEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 262 V------------DVVKGKDLTSDGRLNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 262 v------------~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
. |.+++..+..+.+..+ .++...|.|.++..+|+|.|+|.|.|..|..+.++.|.|++
T Consensus 243 C~~~~~p~~~~v~W~~~g~~~~~~~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~~ 312 (312)
T 2y23_A 243 CKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 312 (312)
T ss_dssp EEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSCC
T ss_pred EEEcCCCCCCEEEEeeCCEECCCCCcEEE--ECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEecC
Confidence 0 1111111111111111 13446899999999999999999999999999999998753
No 33
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=5.5e-30 Score=224.38 Aligned_cols=276 Identities=18% Similarity=0.183 Sum_probs=179.1
Q ss_pred eeeecccCCCCcccCCCCC-CCCCCCCCcccCCCCCCCcccccccccccc-------------cccC----CCCeeEecC
Q psy1095 11 LSVKLTRPSGLMSGHSTPR-STPRSTPPRSISPLSSRTFTPYSLNSAIRT-------------RRLT----SSPRFYAVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-------------~~~~----~~p~~~~~~ 72 (325)
+.++|.+++..+....... .....|.|.+++.+|+|.|+|.+.+..+.. ..+. .+|.+..
T Consensus 119 ~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~-- 196 (450)
T 1z7z_I 119 LTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS-- 196 (450)
T ss_dssp EEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC--
T ss_pred cEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC--
Confidence 4678888877665443221 123478899999999999999998764421 1111 1222221
Q ss_pred CceEecCCCeEEEEEEEEec-C--CCeeEEeeCCeeCCCCCcEEEEecCCeEEEE-EccCCCCCCe--EEEEEEEeCCee
Q psy1095 73 HNKICDLGDTVRFQCSVTGQ-P--APWTSWSKDGKPATPNARVTIREKEDLRFLE-ISEVTLEDAG--LYTIKVENNYGS 146 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~~-p--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~-i~~~~~~d~G--~Y~C~~~~~~~~ 146 (325)
+..+.+|+.+.|.|.+.+. | .+.+.|++++..+.. +.... ++...+. ..+++.+|+| .|+|.+.|..+.
T Consensus 197 -~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~~~~--~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~ 271 (450)
T 1z7z_I 197 -PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYG--NDSFSAKASVSVTAEDEGTQRLTCAVILGNQS 271 (450)
T ss_dssp -CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--EEEEE--TTEEEEEEEEECCGGGCEEEEEEEEEEETTEE
T ss_pred -ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eEEec--CCceeEEEEEEeEhhhCCcEEEEEEEccCCcc
Confidence 1568899999999999987 7 789999999998865 22222 2222221 2278999999 999999999998
Q ss_pred EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCccee
Q psy1095 147 VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLV 226 (325)
Q Consensus 147 ~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (325)
......|.|...+ +|.+... ...+.+|+.+.|.|.+. |. +.+.| +|..+.... .
T Consensus 272 ~~~~~~l~V~~~~----~p~i~~~--~~~v~~G~~v~l~C~~~--p~--p~i~W--~g~~~~~~~--------------~ 325 (450)
T 1z7z_I 272 QETLQTVTIYSFP----APNVILT--KPEVSEGTEVTVKCEAH--PR--AKVTL--NGVPAQPLG--------------P 325 (450)
T ss_dssp EEEEEEEEEECCC----CCEEEES--CSEEETTCEEEEEEEC----------------------C--------------C
T ss_pred EEEEEEEEEecCC----CCeEecC--CeeEeCCCcEEEEEecC--CC--CEeEE--CCEEcCCCC--------------c
Confidence 8888888888752 2555433 45789999999999997 55 78999 666652111 1
Q ss_pred EEEEEeCCCCCCCCeEEEEEEEeCCC-c---EEeEEEEEEEeeCCeecCC---------CCce-------------EEEE
Q psy1095 227 IARLKIPHVYPEDEGEFTCRVANELG-E---VVTSACLIVDVVKGKDLTS---------DGRL-------------NIIT 280 (325)
Q Consensus 227 ~~~l~i~~~~~~d~G~Y~C~~~~~~~-~---~~~~~~l~v~~~~~~~~~~---------~~~~-------------~~~~ 280 (325)
...|.|.++..+|+|.|+|.|.|..+ . ....+.|.|...+...... +... -.+.
T Consensus 326 ~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 405 (450)
T 1z7z_I 326 RAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCL 405 (450)
T ss_dssp CCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEE
T ss_pred eEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEE
Confidence 13699999999999999999997665 2 3355666664433211110 0000 1112
Q ss_pred eCCE------EEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 281 VGGT------SVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 281 ~~~~------~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
.++. ..+ .++.+|+|.|+|.|.|..|..+..+.|.|.++
T Consensus 406 ~~g~~~~~~g~~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 406 KDGTFPLPIGESV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp ETTTEECCTTSCE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ECCcccCCCCCeE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 2221 112 57889999999999999999999999999864
No 34
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=2.3e-30 Score=213.68 Aligned_cols=239 Identities=17% Similarity=0.228 Sum_probs=174.6
Q ss_pred ceeeeccc-CCCCcccCCCC------CCCCCCCCCcccCCCCCCCccccccccccc------ccccCCCCeeEecCCceE
Q psy1095 10 SLSVKLTR-PSGLMSGHSTP------RSTPRSTPPRSISPLSSRTFTPYSLNSAIR------TRRLTSSPRFYAVPHNKI 76 (325)
Q Consensus 10 ~~~~~~~~-~~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~~~p~~~~~~~~~~ 76 (325)
...+.|.+ ++..+...... .....+|.|.+++.+|+|.|+|.+.+..+. .+.+..+|.+...|....
T Consensus 32 ~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~ 111 (291)
T 1qz1_A 32 DKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQE 111 (291)
T ss_dssp CCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEE
T ss_pred CcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCccc
Confidence 35677877 44444322110 012357889999999999999999876532 234447888888888888
Q ss_pred ecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC--cEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee--EEEEEE
Q psy1095 77 CDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA--RVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS--VEATAR 152 (325)
Q Consensus 77 v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~ 152 (325)
+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++..... ..|.|.+++.+|+|.|+|.+.+..+. ....+.
T Consensus 112 ~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~ 188 (291)
T 1qz1_A 112 FKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN---NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188 (291)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTT---SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEE
T ss_pred ccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccC---CcEEEccCccccCeEEEEEEEecCCCceeeEEEE
Confidence 9999999999999999999999999998875432 3333222 35999999999999999999986532 334556
Q ss_pred EEEECCCcccCCCeeeecCc--CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEE
Q psy1095 153 LEIMDPRAIISRPKVLNGLE--NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARL 230 (325)
Q Consensus 153 l~v~~~~~~~~~p~~~~~~~--~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (325)
+.|..+ |.+..... ...+..|+.+.|.|.+.+.|. +.+.|++++..+.............. ....|
T Consensus 189 l~v~~~------p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~g~~~~~~~~~~~~~~~~~----~~~~L 256 (291)
T 1qz1_A 189 VIVNVP------PTVQARQSIVNATANLGQSVTLVCDADGFPE--PTMSWTKDGEPIENEEEDDEKHIFSD----DSSEL 256 (291)
T ss_dssp EEEEEE------EEEEESCSEEEEETTSCCCEEEEEEEEEESC--CEEEEEETTEECCCC--CCSSEEECT----TSCEE
T ss_pred EEEecC------CcccccccccccccccCceEEEEEEEEEeCC--CcEEEEECCEECcCCCCCCcceEEcC----CCcEE
Confidence 666554 33333222 345678999999999999988 89999999998876542111111111 12589
Q ss_pred EeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 231 KIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 231 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 257 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 257 TIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 999999999999999999999999888888885
No 35
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=225.94 Aligned_cols=237 Identities=15% Similarity=0.199 Sum_probs=161.0
Q ss_pred eeeecccCCCCcccCCCCC----CCC------CCCCCcccCCCCCCCccccccccccccc---------ccCCCCeeEec
Q psy1095 11 LSVKLTRPSGLMSGHSTPR----STP------RSTPPRSISPLSSRTFTPYSLNSAIRTR---------RLTSSPRFYAV 71 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~----~~~------~~l~i~~v~~~d~G~Y~c~~~~~~~~~~---------~~~~~p~~~~~ 71 (325)
+.++|.+++..+....... ... ..|.|.+++.+|+|.|+|.+.+..+... ....+|.+...
T Consensus 146 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~ 225 (523)
T 2rcj_C 146 VTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPL 225 (523)
T ss_pred eEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEec
Confidence 4678888887665432111 011 2588999999999999999987654321 12246666544
Q ss_pred CCceEecCCCeEEEEEEEEec-CCC-eeEEeeCCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 72 PHNKICDLGDTVRFQCSVTGQ-PAP-WTSWSKDGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
+....+.+|+.+.|.|.+.+. |.| .++|++++..+...........++ ...|.|.+++.+| |.|+|.+.|..+
T Consensus 226 ~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g 304 (523)
T 2rcj_C 226 APSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 304 (523)
T ss_pred CCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCC
Confidence 444557899999999999886 877 899999998754211111111112 2479999999999 999999999988
Q ss_pred eEEEEEEEEEECCCcccCCCee-eecCcCee-EecCCcEEEEEEEEecCCC--CCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 146 SVEATARLEIMDPRAIISRPKV-LNGLENLR-CCDGDSVTFECQVQVVPPN--DHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 146 ~~~~~~~l~v~~~~~~~~~p~~-~~~~~~~~-v~~g~~v~l~C~~~~~~~~--~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
.......+.+... |.+ ...+.... +.+|+.+.|.|.+.+.++. .+.+.|++++..+......... ...+
T Consensus 305 ~~~~~~~l~v~~~------P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~-~~~~ 377 (523)
T 2rcj_C 305 NTKVDKRVEPLSL------PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPRE-QQYN 377 (523)
T ss_pred CcceEEecCCCcC------ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCce-ecCC
Confidence 7655555555432 333 22222233 6789999999999987642 2589999999988654432211 1122
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
......+.|.|.++..+|+|.|+|.|.|..+...
T Consensus 378 g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 411 (523)
T 2rcj_C 378 STYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAP 411 (523)
T ss_pred CcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCc
Confidence 2233456799999999999999999998766543
No 36
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=4.4e-31 Score=220.63 Aligned_cols=245 Identities=18% Similarity=0.219 Sum_probs=181.7
Q ss_pred eeeecccCCCCcccCCCCC--CCCCCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeEecCCceEecCCCeE
Q psy1095 11 LSVKLTRPSGLMSGHSTPR--STPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFYAVPHNKICDLGDTV 83 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v 83 (325)
..+.|.+++..+....... ....+|.|.+++.+|+|.|+|.+.+..+.. +.+..+|.+...+....+.+|+.+
T Consensus 37 ~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~ 116 (317)
T 2y25_A 37 THIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDL 116 (317)
T ss_dssp CEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCC
T ss_pred CEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccCCceecccCCCe
Confidence 4577887776665443322 223578899999999999999997765432 112223333333444556788888
Q ss_pred EEEEEEEe----------cCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy1095 84 RFQCSVTG----------QPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARL 153 (325)
Q Consensus 84 ~l~C~~~~----------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 153 (325)
.|.|.+.+ .|.+.+.|++++..+....++.....+....|.|.+++.+|+|.|+|.+.|..+.....+.+
T Consensus 117 ~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 196 (317)
T 2y25_A 117 KIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDL 196 (317)
T ss_dssp EEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEE
Confidence 88888766 68899999999999988888887777777889999999999999999999988877777766
Q ss_pred EEECC--------------CcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEE
Q psy1095 154 EIMDP--------------RAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQ 218 (325)
Q Consensus 154 ~v~~~--------------~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 218 (325)
.+... ......|.+... +....+..|+.+.|.|.+.+.|. +.+.|++++..+.........
T Consensus 197 ~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~i~W~~~g~~~~~~~~~~~~-- 272 (317)
T 2y25_A 197 SGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPP--PEVSWLKNEKALASDDHCNLK-- 272 (317)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSC--CEEEEEESSSEECCCSSEEEC--
T ss_pred eeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCC--CEEEEEECCEeCCCCCcEEEE--
Confidence 64310 000123444433 33467889999999999999988 899999999988765543222
Q ss_pred ec-CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 219 VD-SKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 219 ~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
.. + ....|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 273 ~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 273 FEAG----RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 314 (317)
T ss_dssp CBTT----TEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCC----CEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 22 2 34689999999999999999999999999988888885
No 37
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.8e-31 Score=224.72 Aligned_cols=242 Identities=24% Similarity=0.347 Sum_probs=107.3
Q ss_pred ecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVE 148 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 148 (325)
..|....+.+|+++.|.|.+.+. |.+.+.|++++..+....++... ...|.|.+++.+|+|.|+|.+.+. +...
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~ 87 (334)
T 1ry7_B 13 GQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG----PQRLQVLNASHEDSGAYSCRQRLT-QRVL 87 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec----cceEEEeecccccCEEEEEEEEeC-CeEE
Confidence 34777889999999999999876 67899999999988766555432 246999999999999999999988 6666
Q ss_pred EEEEEEEECCCccc----------------CCCeeeec----CcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEec
Q psy1095 149 ATARLEIMDPRAII----------------SRPKVLNG----LENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIK 208 (325)
Q Consensus 149 ~~~~l~v~~~~~~~----------------~~p~~~~~----~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~ 208 (325)
..+.|.|...+... .+|.+... .....+.+|+.+.|.|.+.+.|. +.+.|++++..+.
T Consensus 88 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~--~~v~W~~~~~~~~ 165 (334)
T 1ry7_B 88 CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPT--PSISWLKNGREFR 165 (334)
T ss_dssp -------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSC--CEEECCBTTBCCC
T ss_pred EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCC--CeEEEEECCEECc
Confidence 66677776543211 12333221 12356788999999999998877 8999999998876
Q ss_pred cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCC--eecC---------------
Q psy1095 209 LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKG--KDLT--------------- 271 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~--~~~~--------------- 271 (325)
......... ... ....|.|.+++.+|+|.|+|.+.|..+.....+.|.|..... +.+.
T Consensus 166 ~~~~~~~~~-~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v 240 (334)
T 1ry7_B 166 GEHRIGGIK-LRH----QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDV 240 (334)
T ss_dssp TTSSTTCCC-CCT----TTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCE
T ss_pred cccccccee-ccc----ceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCE
Confidence 544321110 111 124799999999999999999999999888888888854321 1110
Q ss_pred -------CCCceE-EEEe----C-------C------------------EEEEEEcCCCCCCCeEEEEEEECCCeeEEeE
Q psy1095 272 -------SDGRLN-IITV----G-------G------------------TSVLTIEDITGDDSGKYQVHVSNQHGSDSCY 314 (325)
Q Consensus 272 -------~~~~~~-~~~~----~-------~------------------~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 314 (325)
...... .+.. + + ...|.|.++..+|+|.|+|.|.|..|....+
T Consensus 241 ~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 320 (334)
T 1ry7_B 241 EFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHS 320 (334)
T ss_dssp EECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEE
T ss_pred EEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEE
Confidence 000111 1111 0 0 1269999999999999999999999999999
Q ss_pred EEEEEeccc
Q psy1095 315 ASVAVEGRK 323 (325)
Q Consensus 315 ~~l~V~~~p 323 (325)
+.|.|...|
T Consensus 321 ~~l~V~~~~ 329 (334)
T 1ry7_B 321 AWLVVLPAE 329 (334)
T ss_dssp EEEEEECSC
T ss_pred EEEEEEECC
Confidence 999998765
No 38
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=9.6e-30 Score=219.63 Aligned_cols=233 Identities=25% Similarity=0.361 Sum_probs=180.4
Q ss_pred eeecccCCCCcccCCC----CCCCCCCCCCcccCCCCCCCcccccccccccc------cccCCCC------eeEecCCce
Q psy1095 12 SVKLTRPSGLMSGHST----PRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT------RRLTSSP------RFYAVPHNK 75 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~----~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~------~~~~~~p------~~~~~~~~~ 75 (325)
.+.|.+++..+..... ......+|.|.+++.+|+|.|+|.+.+..+.. ..+..+| .+...+...
T Consensus 152 ~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~ 231 (403)
T 3laf_A 152 TIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNV 231 (403)
T ss_dssp EEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCE
T ss_pred eEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCce
Confidence 6778887776642211 11234578999999999999999998754422 1222222 345566777
Q ss_pred EecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy1095 76 ICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEI 155 (325)
Q Consensus 76 ~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 155 (325)
.+.+|+.+.|.|.+.+.|.+.+.|++++..+...........+ ..|.|.+++.+|+|.|+|.+.|..+.....+.|.|
T Consensus 232 ~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (403)
T 3laf_A 232 IAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTYKNENISASAELTV 309 (403)
T ss_dssp EEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCc--cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEE
Confidence 8889999999999999999999999999988654332222222 36999999999999999999999998888888888
Q ss_pred ECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCC
Q psy1095 156 MDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHV 235 (325)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 235 (325)
..+ |.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+......... .. ..|.|.++
T Consensus 310 ~~~------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~~--~~-------~~L~i~~v 372 (403)
T 3laf_A 310 LVP------PWFLNHPSNLYAYESMDIEFECAVSGKPV--PTVNWMKNGDVVIPSDYFQIV--GG-------SNLRILGV 372 (403)
T ss_dssp EEE------EEEEECCCCEECCTTCCEEECCEEEEESC--CEEEEEETTEECCCSSSEEEE--TT-------TEEEESSC
T ss_pred ECC------CcEeecCcceEEecCCeEEEEEEEeeccC--CEEEEEECCEECCCCCcEEEe--cC-------ccEEEecc
Confidence 765 55566666677889999999999999998 899999999988655433221 22 37999999
Q ss_pred CCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 236 YPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 236 ~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
+.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 373 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 373 VKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred ccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 9999999999999999999998888773
No 39
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=213.56 Aligned_cols=233 Identities=19% Similarity=0.263 Sum_probs=167.9
Q ss_pred eeecccCCCCcccCCCC-----CCCCCCCCCcccCC-CCCCCcccccccccccc-----cccCC-------CCeeEecCC
Q psy1095 12 SVKLTRPSGLMSGHSTP-----RSTPRSTPPRSISP-LSSRTFTPYSLNSAIRT-----RRLTS-------SPRFYAVPH 73 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~v~~-~d~G~Y~c~~~~~~~~~-----~~~~~-------~p~~~~~~~ 73 (325)
.+.|.+++..+...... ......|.|.+++. +|+|.|+|.+.+..+.. +.+.. .|.+...|.
T Consensus 37 ~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~ 116 (304)
T 2yd9_A 37 RVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQ 116 (304)
T ss_dssp EEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCC
T ss_pred eEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCc
Confidence 67888887766443211 11124688999997 99999999998765432 12222 277888888
Q ss_pred ceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC---cEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEE
Q psy1095 74 NKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA---RVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEAT 150 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 150 (325)
...+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++.... ...|.|.+++.+|+|.|+|.+.|..+.....
T Consensus 117 ~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 193 (304)
T 2yd9_A 117 LKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR---SGALQIESSEETDQGKYECVATNSAGVRYSS 193 (304)
T ss_dssp CEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECT---TSCEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred cEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCC---CeEEEEccCCcccCEEEEEEEEeCCCCEEec
Confidence 8889999999999999999999999999999886532 222222 2369999999999999999999998865532
Q ss_pred -EEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEE
Q psy1095 151 -ARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIAR 229 (325)
Q Consensus 151 -~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (325)
..+.|... ..+|.+...+....+.+|+.+.|.|.+.|.|. +.+.|++++..+....... . ....
T Consensus 194 ~~~l~v~~~---~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~~~~~~l~~~~~~~-----~-----~~~~ 258 (304)
T 2yd9_A 194 PANLYVRVQ---NVAPRFSILPMSHEIMPGGNVNITCVAVGSPM--PYVKWMQGAEDLTPEDDMP-----V-----GRNV 258 (304)
T ss_dssp CEEEEEECC---CEEEEEEECCCCBCCCTTCCEEEEEEEEEESC--CEEEEEETTEECSCSSSCC-----B-----SEEE
T ss_pred cEEEEEEee---ccCCcEEecCCceEEcCCCeEEEEEEEeeeCC--CEEEEEECCEECCCccccc-----C-----CcEE
Confidence 45555432 12356666666677889999999999999988 8999999999886554321 1 2346
Q ss_pred EEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 230 LKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 230 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
|.|.++ +|+|.|+|.|.|..|.....+.|.|..
T Consensus 259 L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 291 (304)
T 2yd9_A 259 LELTDV--KDSANYTCVAMSSLGVIEAVAQITVKS 291 (304)
T ss_dssp EEECSC--CSCEEEEEEEEETTEEEEEEEEEC---
T ss_pred EEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 777776 589999999999999999888888843
No 40
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=3.6e-29 Score=216.63 Aligned_cols=259 Identities=12% Similarity=0.081 Sum_probs=145.8
Q ss_pred CCCCCCcccccccccccc------cc----------c--CC-C--CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEe
Q psy1095 42 PLSSRTFTPYSLNSAIRT------RR----------L--TS-S--PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWS 100 (325)
Q Consensus 42 ~~d~G~Y~c~~~~~~~~~------~~----------~--~~-~--p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~ 100 (325)
.+|.|.|.|...+..... .. + .. | +.++..|....+.+|+++.|.|.+.+.|.+.+.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~ 83 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWV 83 (423)
T ss_dssp ----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEE
Confidence 468999999986652211 10 0 11 1 34556666888999999999999999999999999
Q ss_pred eCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCC
Q psy1095 101 KDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGD 180 (325)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~ 180 (325)
+++..+.....+.. ......+|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+. +. ...+..+..|+
T Consensus 84 ~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~------~~-~~~p~~~~~~~ 155 (423)
T 3qs7_E 84 FKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLL------YT-LRRPYFRKMEN 155 (423)
T ss_dssp ETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----------C-EEEEEEEECSS
T ss_pred ECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcc------cc-ccCCcEeccCC
Confidence 99887654322211 112235699999999999999999999988887788888865422 11 11122345688
Q ss_pred cEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeC-CCCCCCCeEEEEEEEeCCCcEEe-EE
Q psy1095 181 SVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIP-HVYPEDEGEFTCRVANELGEVVT-SA 258 (325)
Q Consensus 181 ~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~~~~~~~~~~~-~~ 258 (325)
.+.|.|.+.|.|. +.+.|++++..+....... ..+ .+... .+...|+|.|+|.|.|..|.... .+
T Consensus 156 ~~~L~C~a~G~P~--P~i~W~k~~~~~~~~~~~~----~~~-------~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~ 222 (423)
T 3qs7_E 156 QDALVCISESVPE--PIVEWVLCDSQGESCKEES----PAV-------VKKEEKVLHELFGTDIRCCARNELGRECTRLF 222 (423)
T ss_dssp SSCEEEEEEESSC--CEEEEEEC-----------------C-------EEECCSEECCCCSSCEEEEEECSSCEEEEECE
T ss_pred ceEEEEEEeeecC--CeEEEEECCCCCccccccc----ccc-------ccccceEEecccCeEEEEEEEcCCCCcceeeE
Confidence 8899999999998 8999999887543211000 000 01111 11578999999999999887644 23
Q ss_pred EEEEEeeC-----------------------------------CeecCCCCceEE-EE-----eCCEEEEEEcCCCCCCC
Q psy1095 259 CLIVDVVK-----------------------------------GKDLTSDGRLNI-IT-----VGGTSVLTIEDITGDDS 297 (325)
Q Consensus 259 ~l~v~~~~-----------------------------------~~~~~~~~~~~~-~~-----~~~~~~l~i~~v~~~d~ 297 (325)
.|.|...+ +..+........ .. ......|.|.++..+|+
T Consensus 223 ~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 302 (423)
T 3qs7_E 223 TIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDT 302 (423)
T ss_dssp EEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTC
T ss_pred EEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHC
Confidence 44432111 111100000000 00 01123699999999999
Q ss_pred eEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 298 GKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 298 G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
|.|+|.|.|. .+..+.|.|..+|.
T Consensus 303 G~Y~C~A~N~---~~~~~~L~V~~~p~ 326 (423)
T 3qs7_E 303 GYYTCSSSKH---PSQSALVTIVEKGF 326 (423)
T ss_dssp EEEEEEETTE---EEEEEEEEEESSCE
T ss_pred EEEEEEEecC---CCceEEEEEEeCCc
Confidence 9999999998 67778888887764
No 41
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.7e-30 Score=218.85 Aligned_cols=254 Identities=24% Similarity=0.333 Sum_probs=143.7
Q ss_pred eeeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccccc-----cccCC---------------------
Q psy1095 11 LSVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTS--------------------- 64 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~--------------------- 64 (325)
..+.|.+++..+...........+|.|.+++.+|+|.|+|.+.+. +.. +.+..
T Consensus 39 ~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 117 (334)
T 1ry7_B 39 GPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDT 117 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccC
Confidence 367888888777655555555678999999999999999999876 211 11211
Q ss_pred -CCeeEec----CCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEE-EEecCCeEEEEEccCCCCCCeEEEE
Q psy1095 65 -SPRFYAV----PHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVT-IREKEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 65 -~p~~~~~----~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.. .........|.|.+++.+|+|.|+|
T Consensus 118 ~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 197 (334)
T 1ry7_B 118 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 197 (334)
T ss_dssp -CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEE
T ss_pred CCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEE
Confidence 3333321 123568899999999999999999999999998886544321 1122334579999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCCcccCCCeeee-cCcCeeEecCCcEEEEEEEEecCCCCCeeEEee----CCEEeccCCCC
Q psy1095 139 KVENNYGSVEATARLEIMDPRAIISRPKVLN-GLENLRCCDGDSVTFECQVQVVPPNDHDISWFR----NNRLIKLDSDM 213 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~-~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~----~~~~~~~~~~~ 213 (325)
.+.|..+.....+.|.|...+. .+|.+.. .+....+..|+.+.|.|.+.+.|. +.+.|++ ++..+......
T Consensus 198 ~a~n~~g~~~~~~~l~V~~~~~--~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~--p~v~W~~~~~~~g~~~~~~~~~ 273 (334)
T 1ry7_B 198 VVENKFGSIRQTYTLDVLERSP--HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQ--PHIQWLKHVEVNGSKVGPDGTP 273 (334)
T ss_dssp EEEETTEEEEEEEEEEEECCCC--SSCBCCTTCSCCEEEESSCCEEECCCCBCSSC--EEEEEEECCCGGGCSBCTTSSB
T ss_pred EEEeCCCCEEEEEEEEEecCCC--CCCceEecCCCceEEeCCCCEEEEEEEecCCC--CeEEEEECCcCCCccccCCCCe
Confidence 9999998888888888876432 1233332 234567889999999999999887 8999999 66655433221
Q ss_pred ceEEEecCCc---ceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCee
Q psy1095 214 KPEVQVDSKE---NLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKD 269 (325)
Q Consensus 214 ~~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~ 269 (325)
.......+.. ......|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 274 YVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEEL 332 (334)
T ss_dssp CCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC-
T ss_pred eEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCCc
Confidence 1110000000 0012479999999999999999999999999999999996655443
No 42
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=2.1e-29 Score=216.00 Aligned_cols=229 Identities=20% Similarity=0.281 Sum_probs=176.6
Q ss_pred eeeecccCCCCcccCC----CCCCCCCCCCCcccCCCCCCCcccccccccccc----------cc------cCCCCeeEe
Q psy1095 11 LSVKLTRPSGLMSGHS----TPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT----------RR------LTSSPRFYA 70 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~----~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~----------~~------~~~~p~~~~ 70 (325)
..+.|.+++....... .......+|.|.+++.+|+|.|+|.+.+..+.. .. ...+|.+..
T Consensus 132 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~ 211 (382)
T 1cs6_A 132 LSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKA 211 (382)
T ss_dssp CEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEE
T ss_pred cEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceec
Confidence 4667877765532111 112234578999999999999999998765210 01 112455544
Q ss_pred -cCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 71 -VPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 71 -~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
.|....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .......|.|.+++.+|+|.|+|.+.|..+....
T Consensus 212 ~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 285 (382)
T 1cs6_A 212 KFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTY 285 (382)
T ss_dssp CCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEE
Confidence 355778899999999999999999999999988765431 1123356999999999999999999999998888
Q ss_pred EEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEE
Q psy1095 150 TARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIAR 229 (325)
Q Consensus 150 ~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (325)
.+.|.|..+ |.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+....+... .. ..
T Consensus 286 ~~~l~V~~~------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~---~~-------~~ 347 (382)
T 1cs6_A 286 QGRIIIHAQ------PDWLDVITDTEADIGSDLRWSCVASGKPR--PAVRWLRDGQPLASQNRIEV---SG-------GE 347 (382)
T ss_dssp EEEEEEEEE------EEEEECCCCEEEETTCCEEEECEEEEESC--CEEEEEETTEECCCCSSEEE---ET-------TE
T ss_pred EEEEEEecC------CCcccCCCccEEcCCCeEEEEEEeeeecC--CEEEEEECCEECCCCceEEE---EC-------CE
Confidence 888888765 55555566778899999999999999998 89999999998876543221 22 37
Q ss_pred EEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 230 LKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 230 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 348 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 348 LRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999999999999999999999999998888873
No 43
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.97 E-value=3.3e-28 Score=188.56 Aligned_cols=188 Identities=25% Similarity=0.459 Sum_probs=156.2
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC--cEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA--RVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+|.+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+.... ++.+...++...|.|.+++..|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 47888888899999999999999999999999999999998886653 5555555667889999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+..+.......|.|.... .+|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+......... .++
T Consensus 84 n~~~~~~~~~~l~v~~~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~~~~--~~~ 156 (194)
T 2a38_A 84 NGSGQATSTAELLVKAET---APPNFVQRLQSMTVRQGSQVRLQVRVTGIPT--PVVKFYRDGAEIQSSLDFQIS--QEG 156 (194)
T ss_dssp ETTEEEEEEEEEEEECCC---EEEEEEECCCCEEECTTEEEEEEEEEEEESC--CEEEEEETTEECCCSSSEEEE--EET
T ss_pred cCCceEeEEEEEEEccCC---CCCEEEeCCccEEEcCCCEEEEEEEEEEecC--CeEEEEECCEECCCCCcEEEE--EcC
Confidence 998887777888887531 2356666666778899999999999999888 889999999988765543322 333
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
....|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 157 ----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 157 ----DLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ----TEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ----CEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 2357999999999999999999999999888888776
No 44
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=4.3e-29 Score=209.77 Aligned_cols=241 Identities=14% Similarity=0.122 Sum_probs=173.8
Q ss_pred eeeecccCCCCcccCCCCCCCCCCCCCcccCCCCCC-Ccccccccccccc------cccCCCCeeEecCCceEecCCCeE
Q psy1095 11 LSVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSR-TFTPYSLNSAIRT------RRLTSSPRFYAVPHNKICDLGDTV 83 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~Y~c~~~~~~~~~------~~~~~~p~~~~~~~~~~v~~g~~v 83 (325)
..++|.+++......... ....+|.|.+++++|+| .|+|.+.+..+.. ..+..+|.+...+....+.+|+.+
T Consensus 68 ~~v~W~k~~~~~~~~~~~-~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v 146 (329)
T 3oq3_B 68 NVVNWEKIGKTRRPLNRR-VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGI 146 (329)
T ss_dssp CEEEEEECSSSCEECSTT-EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCE
T ss_pred CeeEEEECCCCccccCce-eecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcE
Confidence 468888888766543222 44678999999999999 9999998866311 233356665554444457789999
Q ss_pred EEEEEEEecC-CCeeEEeeCCeeCCC-CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC--Cee----EEEEEEEEE
Q psy1095 84 RFQCSVTGQP-APWTSWSKDGKPATP-NARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN--YGS----VEATARLEI 155 (325)
Q Consensus 84 ~l~C~~~~~p-~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~----~~~~~~l~v 155 (325)
.|.|.+.+.| .+.+.|+|++..+.. ..++... + ..|.|.+++.+|+|.|+|.+.|. .+. ....+.|.|
T Consensus 147 ~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V 222 (329)
T 3oq3_B 147 DLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS--G--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTV 222 (329)
T ss_dssp EEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE--T--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEE
T ss_pred EEEeccCCCCCCceEEEEECCccCCCCCceEecC--C--CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEE
Confidence 9999999999 899999999998853 3344333 2 46999999999999999999986 432 233467777
Q ss_pred ECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecC--CCCC-eeEEeeCCEEec-cCCCCceEEEecCCcceeEEEEE
Q psy1095 156 MDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVP--PNDH-DISWFRNNRLIK-LDSDMKPEVQVDSKENLVIARLK 231 (325)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~--~~~~-~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 231 (325)
...+.. .. .+. .+....+..|+.+.|.|.+.+.| +. + .+.|++++..+. .+..........+ ......|.
T Consensus 223 ~~~~~~-~~-~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~-~i~v~W~~~g~~i~~~~~~~~~~~~~~~--~~~~~~L~ 296 (329)
T 3oq3_B 223 IPSQDH-RF-KLI-LDPKINVTIGEPANITCTAVSTSLLVD-DVLIDWENPSGWIIGLDFGVYSILTSSG--GITEATLY 296 (329)
T ss_dssp ECCCCC-CE-EEE-CCSEEEECTTSCEEEEEEEEETTCCTT-CCEEEEECTTSCBCCBCSSEEEEEEEET--TEEEEEEE
T ss_pred ECCCCC-CC-cee-cCCeeEEecCCCEEEEEEEEECCCCCC-CcEEEEEECCeeeeccCCceeeeecccC--ceeEeEEE
Confidence 765321 01 222 44456788999999999999998 32 5 899999988753 2222111111111 12457899
Q ss_pred eCCCCCCCCe-EEEEEEEeCCCcEEeEEEEEE
Q psy1095 232 IPHVYPEDEG-EFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 232 i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v 262 (325)
|.+++.+|+| .|+|.|.|..|.....+.|.|
T Consensus 297 I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 297 FENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp ESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 9999999999 999999999999988887765
No 45
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=1.1e-28 Score=212.93 Aligned_cols=235 Identities=16% Similarity=0.237 Sum_probs=176.8
Q ss_pred eeeecccCCCCcccCC--CCCCCCCCCCCcccCCCC-CCCcccccccccccc--------ccc-------CCCCeeEecC
Q psy1095 11 LSVKLTRPSGLMSGHS--TPRSTPRSTPPRSISPLS-SRTFTPYSLNSAIRT--------RRL-------TSSPRFYAVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~--~~~~~~~~l~i~~v~~~d-~G~Y~c~~~~~~~~~--------~~~-------~~~p~~~~~~ 72 (325)
..+.|.+++....... .......+|.|.+++.+| +|.|+|.+.+..+.. ..+ ..+|.+...+
T Consensus 147 ~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~ 226 (404)
T 3p3y_A 147 PVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQ 226 (404)
T ss_dssp CEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSC
T ss_pred CeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCcccccc
Confidence 3567777654322221 111234578899999999 599999997654421 111 1234443322
Q ss_pred ---CceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 73 ---HNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 73 ---~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
....+.+|+++.|.|.+.+.|.+.+.|++++..+..... .... ....|.|.+++.+|+|.|+|.+.|..+....
T Consensus 227 ~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 303 (404)
T 3p3y_A 227 GTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KFEN--FNKALRITNVSEEDSGEYFCLASNKMGSIRH 303 (404)
T ss_dssp SSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EEEG--GGTEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-cccc--cCceEEEccCCHhHCEEEEEEEEeCCCcEEE
Confidence 235688999999999999999999999999998865543 2222 2346999999999999999999999998888
Q ss_pred EEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEE
Q psy1095 150 TARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIAR 229 (325)
Q Consensus 150 ~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (325)
.+.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|+ +.+.|++++..+............. ..
T Consensus 304 ~~~l~V~~~------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~~~~~~-------~~ 368 (404)
T 3p3y_A 304 TISVRVKAA------PYWLDEPKNLILAPGEDGRLVCRANGNPK--PTVQWMVNGEPLQSAPPNPNREVAG-------DT 368 (404)
T ss_dssp EEEEEEEEE------EEEEECCCCEEECTTCCEEEECEEEEESC--CEEEEEETTEEGGGSCCCTTEEEET-------TE
T ss_pred EEEEEEeCC------CeeeccCCcceeecCCcEEEEEEccccCC--CceEEEECCEecCCCCCCceEEecC-------CE
Confidence 888888765 55666666778889999999999999988 8999999999987654322222223 38
Q ss_pred EEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 230 LKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 230 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 369 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 369 IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp EEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 9999999999999999999999999998888773
No 46
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=9.4e-30 Score=212.09 Aligned_cols=240 Identities=11% Similarity=0.124 Sum_probs=174.2
Q ss_pred eeeecccCCCCcccCCCCCC----CCCCCCCcccCCCCCCCccccccccccccc----ccCC------------CCeeEe
Q psy1095 11 LSVKLTRPSGLMSGHSTPRS----TPRSTPPRSISPLSSRTFTPYSLNSAIRTR----RLTS------------SPRFYA 70 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~----~~~~------------~p~~~~ 70 (325)
..++|.+++..+........ ...+|.|.+++.+|+|.|+|.+.+..+... .+.. +|.+..
T Consensus 32 ~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~~~~~~~p~~~~ 111 (312)
T 2y23_A 32 SEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPV 111 (312)
T ss_dssp CCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHHHHHHHHSCBCCE
T ss_pred cEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeecccccCCCCcccc
Confidence 46778877776654332221 225788999999999999999987554322 1111 565555
Q ss_pred cCC-ceEecCCCeEEEEEEEE-ecCCCeeEEeeCCeeCCCCCcEEEEec--CCeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 71 VPH-NKICDLGDTVRFQCSVT-GQPAPWTSWSKDGKPATPNARVTIREK--EDLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 71 ~~~-~~~v~~g~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
.+. ...+.+|+++.|.|.+. +.|.+.+.|++++..+....++.+... .+...|.|.+++.+|+|.|+|.+.+....
T Consensus 112 ~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 191 (312)
T 2y23_A 112 KSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT 191 (312)
T ss_dssp EEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCE
T ss_pred ccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCce
Confidence 444 77799999999999998 789999999999999988776666543 45677999999999999999999865443
Q ss_pred EEEEEEEEEECCC---------------cccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCC
Q psy1095 147 VEATARLEIMDPR---------------AIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDS 211 (325)
Q Consensus 147 ~~~~~~l~v~~~~---------------~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~ 211 (325)
.. ..+.+.... ....+|.+.... ...+.+|+.+.|.|.+.+.|++ ..+.|++++..+....
T Consensus 192 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~-~~v~W~~~g~~~~~~~ 267 (312)
T 2y23_A 192 NH--STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKE-THIVWYKDEREISVDE 267 (312)
T ss_dssp EE--EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSS-CEEEEEETTEEEEEEC
T ss_pred EE--EEEEEcchhhhhhcccccccccchhhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCC-CEEEEeeCCEECCCCC
Confidence 33 333331100 001234444332 3678899999999999998872 3999999999887544
Q ss_pred CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 212 DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
..... + ....|.|.+++.+|+|.|+|.|.|..|.....+.|.+
T Consensus 268 ~~~~~----~----~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 268 KHDFK----D----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp CC------------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred cEEEE----C----CEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 43322 1 2468999999999999999999999999998888765
No 47
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.97 E-value=1.1e-30 Score=228.04 Aligned_cols=277 Identities=12% Similarity=0.127 Sum_probs=173.8
Q ss_pred CCCCCcccCCCCCCCccccccccccc------ccccC---CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-eeEEee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR------TRRLT---SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WTSWSK 101 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~~ 101 (325)
.+|.|.+++++|+|.|+|.+.+.... ...+. .+|.+...+......+|+.+.|.|.+.+ .|.+ .++|++
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 154 (438)
T 1qgc_4 75 FTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 154 (438)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE
T ss_pred EEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEE
Confidence 36899999999999999999876532 11222 3677766544444456889999999987 6777 899999
Q ss_pred CCeeCCCCCcE--EEEec-CC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCe
Q psy1095 102 DGKPATPNARV--TIREK-ED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENL 174 (325)
Q Consensus 102 ~~~~~~~~~~~--~~~~~-~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~ 174 (325)
++..+...... ..... ++ ...|.|.++..+|+|.|+|.+.|..+.... .+.+... ..+.....+...
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~--~~~~~~~----~~~~~~~~~~~~ 228 (438)
T 1qgc_4 155 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI--VKSFNRN----ECEVMLVESGGG 228 (438)
T ss_dssp TTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE--EEEEETT----C-CCEEEEECCE
T ss_pred CCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCce--ecccccc----cceeEEecCCce
Confidence 99988654111 11111 11 246999999999999999999998775422 2233221 111222334456
Q ss_pred eEecCCcEEEEEEEEecCCCCCeeEEeeC--CEEecc---------------CCCCceEEEecCCcceeEEEEEeCCCCC
Q psy1095 175 RCCDGDSVTFECQVQVVPPNDHDISWFRN--NRLIKL---------------DSDMKPEVQVDSKENLVIARLKIPHVYP 237 (325)
Q Consensus 175 ~v~~g~~v~l~C~~~~~~~~~~~~~W~~~--~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 237 (325)
.+.+|+.+.|.|.+.+.|.+.+.+.|+++ +..+.. ....+.....++ ......|.|.+++.
T Consensus 229 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~ 306 (438)
T 1qgc_4 229 LVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDN--AKNTLYLQMSSLRS 306 (438)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEET--TTTEEEEEECSCCG
T ss_pred EEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeec--CCCeEEEEECCCCh
Confidence 78899999999999998832278999996 433320 000111111110 01246899999999
Q ss_pred CCCeEEEEEEEeCCC-----cEEeEEEEEEEee---CCe--------ecCCCC--------------ceEE---------
Q psy1095 238 EDEGEFTCRVANELG-----EVVTSACLIVDVV---KGK--------DLTSDG--------------RLNI--------- 278 (325)
Q Consensus 238 ~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~---~~~--------~~~~~~--------------~~~~--------- 278 (325)
+|+|.|+|.|.|..+ .......|.|... .+. .+..+. ...+
T Consensus 307 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~ 386 (438)
T 1qgc_4 307 ADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSS 386 (438)
T ss_dssp GGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCS
T ss_pred hhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCC
Confidence 999999999998433 1112233333210 000 000000 0000
Q ss_pred -------EEeCCE----EEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEE
Q psy1095 279 -------ITVGGT----SVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVA 318 (325)
Q Consensus 279 -------~~~~~~----~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 318 (325)
...++. +.|.|.++..+| |.|+|.|.|..|.......|.
T Consensus 387 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 387 GVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp SEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred ceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 001122 258898888888 999999999999877766654
No 48
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=7.3e-29 Score=204.67 Aligned_cols=230 Identities=17% Similarity=0.175 Sum_probs=161.3
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..+|.|...+....+.+|++++|.|.+.+ .+.|++++..+ .. ....+ ..|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~~-~~~~~--~~L~i~~~~~~d~G~Y~C~~~n 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----EM-VENKK--NEWIQEKAEATRTGTYTCSNSN 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS----CE-EEECS--SEEEETTCCGGGCEEEEEEESS
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce----ee-ecCCC--ceEEEeccCHHhCeEEEEEeeC
Confidence 35788887888888999999999999876 89999998876 11 11122 6799999999999999999988
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEE-eeCCEEeccCCCCceEEEecC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISW-FRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W-~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+. ...+.|.|..++.. ........+.+|+.+.|.|.+.+ |. .+.+.| ++++..+..... ......+
T Consensus 79 --g~-~~~~~l~V~~~~~~------~~~~~~~~~~~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~l~~~~~--~~~~~~~ 145 (290)
T 2o26_X 79 --GL-TSSIYVFVRDPAKL------FLVGLPLFGKEDSDALVRCPLTD-PQ-VSQYSLIECDGKSLPTDLT--FVPNPKA 145 (290)
T ss_dssp --SC-EEEEEEEEECSSCC------BCCCCCEEEETTSCEEECCCBSC-CS-CEEEEEEETTSCCCCTTCE--EEEETTT
T ss_pred --Cc-cEEEEEEEeCCCcc------cccccceEEecCCeEEEeCcCCC-CC-CceEEEEeCCCcCCCCCCc--eeeCCCC
Confidence 43 66777888765332 23445667889999999999985 33 268999 467776654322 2211222
Q ss_pred CcceeEEEEEeCCCCCCCCe-EEEEEEEeCCCcEEe-EEEEEEEe---eCCee--------cC--------------CCC
Q psy1095 222 KENLVIARLKIPHVYPEDEG-EFTCRVANELGEVVT-SACLIVDV---VKGKD--------LT--------------SDG 274 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~-~~~l~v~~---~~~~~--------~~--------------~~~ 274 (325)
.|.|.+++.+|+| .|+|.|.|..+.... .+.|.|.. .++.. +. +..
T Consensus 146 -------~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p 218 (290)
T 2o26_X 146 -------GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTS 218 (290)
T ss_dssp -------EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTT
T ss_pred -------CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcc
Confidence 7999999999999 999999998555332 45666541 11110 00 000
Q ss_pred c-eEEEE----------------------eCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 275 R-LNIIT----------------------VGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 275 ~-~~~~~----------------------~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
. +.... ......|.|.++..+|+|.|+|.|.|..|..+..+.|.|.++|
T Consensus 219 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 219 VNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred eeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 0 11111 1123579999999999999999999999999999999999886
No 49
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=7e-29 Score=201.58 Aligned_cols=222 Identities=18% Similarity=0.222 Sum_probs=163.5
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCC-eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAP-WTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.|.|...|....+.+|+.+.|.|.+.+.|.+ .++|++++..+... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecC
Confidence 4788899999899999999999999888877 99999999987643 235999999999999999999876
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
.+. ..+.|.|... + +...+....+.+|+.+.|.|.+ .+.|. +.+.|++++..+....
T Consensus 71 ~~s--~~~~l~v~~~------~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~--~~v~W~~~g~~~~~~~----------- 128 (262)
T 3rjd_A 71 GRS--DPIQLEIHRG------W-LLLQVSSRVFTEGEPLALRCHAWKDKLV--YNVLYYRNGKAFKFFH----------- 128 (262)
T ss_dssp CCC--CCEEEEEECS------S-EEEEESCSEEETTSCEEEEEEEGGGCCC--EEEEEEETTEEEEEEE-----------
T ss_pred Ccc--ccEEEEEecc------c-eEecCCCeEEecCCeEEEEEEccCCCCC--ceEEEEECCccccccC-----------
Confidence 543 3455666553 2 2233345668899999999999 45555 8999999998874221
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCe-ecC-------------------CC----Cc--e
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGK-DLT-------------------SD----GR--L 276 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~-~~~-------------------~~----~~--~ 276 (325)
....|.|.+++.+|+|.|+|.+.|..+.....+.|.|...... .+. .. .. +
T Consensus 129 ---~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~ 205 (262)
T 3rjd_A 129 ---WNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQL 205 (262)
T ss_dssp ---ECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----E
T ss_pred ---CCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccE
Confidence 1247999999999999999999999987777777777542111 110 00 00 0
Q ss_pred EE-EEe--------CCEEEEEEcCCCCCCCeEEEEEEECCCeeE---EeEEEEEEec
Q psy1095 277 NI-ITV--------GGTSVLTIEDITGDDSGKYQVHVSNQHGSD---SCYASVAVEG 321 (325)
Q Consensus 277 ~~-~~~--------~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~---~~~~~l~V~~ 321 (325)
.. +.. .....|.|.++..+|+|.|+|.|.|..|.. +..+.|.|++
T Consensus 206 ~~~w~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V~G 262 (262)
T 3rjd_A 206 YFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLG 262 (262)
T ss_dssp EEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECEEC
T ss_pred EEEEEeCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEEeC
Confidence 01 111 223479999999999999999999999964 2335665543
No 50
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=1.5e-28 Score=205.19 Aligned_cols=246 Identities=17% Similarity=0.174 Sum_probs=171.8
Q ss_pred eeeecccCCCCcc----cCCCCCCCCCCCCCcccCCCCCCCcccccccccccccc------cCCCCeeEecCC---ceEe
Q psy1095 11 LSVKLTRPSGLMS----GHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRTRR------LTSSPRFYAVPH---NKIC 77 (325)
Q Consensus 11 ~~~~~~~~~~~~~----~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~------~~~~p~~~~~~~---~~~v 77 (325)
..++|.+++.... ..........+|.|.+++.+|+|.|+|.+.+..+.... +..+|.+...+. ...+
T Consensus 36 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~ 115 (315)
T 1itb_B 36 GTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKL 115 (315)
T ss_dssp SCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEE
T ss_pred ceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEE
Confidence 3677877765321 12222233458899999999999999999877543211 113444332222 2458
Q ss_pred cCCCeEEEEEEE------EecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE-eCCeeE---
Q psy1095 78 DLGDTVRFQCSV------TGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE-NNYGSV--- 147 (325)
Q Consensus 78 ~~g~~v~l~C~~------~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~--- 147 (325)
.+|+++.|.|.+ .+.|.+.+.|++++..+........... ..|.|.+++.+|+|.|+|.+. +..+..
T Consensus 116 ~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~ 192 (315)
T 1itb_B 116 PVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVK---DRLIVMNVAEKHRGNYTCHASYTYLGKQYPI 192 (315)
T ss_dssp ETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEET---TEEEESSCCGGGCEEEEEEEEEEETTEEEEE
T ss_pred ecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecC---ceEEEEeceehhCcEEEEEEEcCCCCcEEEE
Confidence 899999999998 7889999999999999865432222222 269999999999999999999 666654
Q ss_pred EEEEEEEEECCCcccCCCeeeecCcC-eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceE--EEecC---
Q psy1095 148 EATARLEIMDPRAIISRPKVLNGLEN-LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPE--VQVDS--- 221 (325)
Q Consensus 148 ~~~~~l~v~~~~~~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~~~~~--- 221 (325)
...+.+.+.... ...+|.+...+.. ..+.+|+.+.|.|.+.+.|. +.+.|++++..+......... .....
T Consensus 193 ~~~~~~~~~~~~-~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~--p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~ 269 (315)
T 1itb_B 193 TRVIEFITLEEN-KPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS--DIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 269 (315)
T ss_dssp EEEEEEEEECCC-CCCCCEECSCCSEEEECCSSSCEEEEEEEEECTT--SEEEEEETTEECCTTCSSEEEEEEEECCSSC
T ss_pred EEEEEEEEecCC-CCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCC--CeeEEEECCEECCcccccccccceeeeccCC
Confidence 334444444221 1235666554433 46789999999999999888 899999999988765432211 11111
Q ss_pred -CcceeEEEEEeCCCCCCC-CeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 222 -KENLVIARLKIPHVYPED-EGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 222 -~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
......+.|.|.+++.+| +|.|+|.|.|..|.....+.|.|
T Consensus 270 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 270 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp GGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEEC
T ss_pred CceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEe
Confidence 011245689999999999 99999999999999998888876
No 51
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=6.3e-29 Score=207.33 Aligned_cols=245 Identities=17% Similarity=0.180 Sum_probs=164.1
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCC-----eeEEeeCCeeC-------------CCCCcEEEEec-----CCeEEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAP-----WTSWSKDGKPA-------------TPNARVTIREK-----EDLRFLE 124 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~-----~v~W~~~~~~~-------------~~~~~~~~~~~-----~~~~~l~ 124 (325)
++..|..+.+..|++++|.|.+.+.+.+ .++|+|++... ....++..... ....+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4567778889999999999999886655 48999987532 12223332211 1235699
Q ss_pred EccCCCCCCeEEEEEEEe-CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEE-ecCCCCCeeEEee
Q psy1095 125 ISEVTLEDAGLYTIKVEN-NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQ-VVPPNDHDISWFR 202 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~-~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~~~~~W~~ 202 (325)
|.+++.+|+|.|+|.+.+ ..+.....+.|.+... |.+........+..|+.+.+.|.+. +.|. +.+.|++
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~------P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~--~~i~W~~ 154 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK------PQNTAEVQKVQLTGEPVPMARCVSTGGRPP--AQITWHS 154 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBC------CEEEEEECCBCCCSSCEEEEEEEEEEEBSC--CEEEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccC------CcceecccceEeecCceEEEEEEccCccCC--cEEEeec
Confidence 999999999999999864 4455566666666544 4555444555667788899999876 5566 8999999
Q ss_pred CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe--EEEEEEEeeCCe--------ecCC
Q psy1095 203 NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT--SACLIVDVVKGK--------DLTS 272 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v~~~~~~--------~~~~ 272 (325)
++..+...... ....+......+.|.|.....+|+|.|+|.|.|..+.... .+.|.|...+.. .+..
T Consensus 155 ~~~~~~~~~~~---~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~ 231 (313)
T 4fqp_A 155 DLGGMPNTSQV---PGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLG 231 (313)
T ss_dssp TTCCEEEEEEE---ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETT
T ss_pred CCcccccccee---eeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecC
Confidence 98766432111 0011122234467999999999999999999997654433 333333221110 0000
Q ss_pred CCce-------------E-EEEeCC----------EEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 273 DGRL-------------N-IITVGG----------TSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 273 ~~~~-------------~-~~~~~~----------~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
+... . .+..++ ...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+++|
T Consensus 232 g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 232 QNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp CCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred CCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 1100 1 111111 1369999999999999999999999999999999998765
No 52
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=7.5e-29 Score=204.41 Aligned_cols=240 Identities=14% Similarity=0.166 Sum_probs=174.8
Q ss_pred eecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCccccccccccc-----ccccCCCCe-eEecCCceEecCCCeEEEE
Q psy1095 13 VKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIR-----TRRLTSSPR-FYAVPHNKICDLGDTVRFQ 86 (325)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~-----~~~~~~~p~-~~~~~~~~~v~~g~~v~l~ 86 (325)
+.|..++..... ........+|.|.+++.+|+|.|+|.+.+.... .+.+..+|. +...+....+.+|+++.|.
T Consensus 32 v~W~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~ 110 (289)
T 3ejj_X 32 VEWDGPISPYWT-LDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLP 110 (289)
T ss_dssp CEEECSCSSSSE-ECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEEC
T ss_pred EEEccCCCceEE-EeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeE
Confidence 566655433221 122334568899999999999999998765442 233444554 5666777889999999999
Q ss_pred EEEEecCCCe-eEEee-CCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE-eCCeeEEEEEEEEEECCCcccC
Q psy1095 87 CSVTGQPAPW-TSWSK-DGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE-NNYGSVEATARLEIMDPRAIIS 163 (325)
Q Consensus 87 C~~~~~p~~~-v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~l~v~~~~~~~~ 163 (325)
|.+.+.+.+. +.|++ ++..+....++..... ..|.|.+++.+|+|.|+|.+. +..+.....+.|.|.... ..
T Consensus 111 C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~--~~ 185 (289)
T 3ejj_X 111 CLITDPALKDSVSLMREGGRQVLRKTVYFFSPW---RGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVH--PE 185 (289)
T ss_dssp EEESCGGGGGSEEEEEGGGEECCTTCCEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSC--CC
T ss_pred EEccCCCcceEEEEEecCCeecCCCccEEECCC---CCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECC--CC
Confidence 9998876654 99986 6777766666665433 259999999999999999998 444555567778887432 13
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEe-cCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQV-VPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
+|.+...+....+.+|+.+.|.|.+.+ .|. +.+.|++++..+....... ...........|.|.+++.+|+|.
T Consensus 186 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~~~~----~~~~~~~~~~~L~i~~v~~~d~G~ 259 (289)
T 3ejj_X 186 PPQIKLEPSKLVRIRGEAAQIVCSATNAEVG--FNVILKRGDTKLEIPLNSD----FQDNYYKKVRALSLNAVDFQDAGI 259 (289)
T ss_dssp CCEEEEESSSEECCSSSCEEEEEEEEESSSC--CEEEEEETTEECCCCEEEE----ECSSSEEEEEEEEESSCCSSSCEE
T ss_pred CCeEEecCCceEEEeCCcEEEEEEeCCCCCc--eEEEEEECCEEeeccCCcc----cccceEEeeEEEEEEeecccCCEE
Confidence 577777777777789999999999998 566 8999999998875432111 111122245789999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEe
Q psy1095 243 FTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
|+|.|.|..|....++.|.+..
T Consensus 260 Y~C~a~N~~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 260 YSCVASNDVGTRTATMNFQVVE 281 (289)
T ss_dssp EEEEEECSSCEEEEEEEEECC-
T ss_pred EEEEEEcCCCCccccEEEEEEe
Confidence 9999999999999998887743
No 53
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=209.63 Aligned_cols=214 Identities=21% Similarity=0.320 Sum_probs=160.7
Q ss_pred CCCCCcccCCCCCCCcccccccccccc------cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIRT------RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA 106 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~~------~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~ 106 (325)
.+|.|.+++.+|+|.|+|.+.+..+.. ..+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 60 ~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~ 139 (291)
T 2wim_A 60 SRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEV 139 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----
T ss_pred EEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccc
Confidence 368899999999999999998765432 23446777777777888999999999999999999999999998877
Q ss_pred CC--CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee--EEEEEEEEEECCCcccCCCeeeecCc--CeeEecCC
Q psy1095 107 TP--NARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS--VEATARLEIMDPRAIISRPKVLNGLE--NLRCCDGD 180 (325)
Q Consensus 107 ~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~p~~~~~~~--~~~v~~g~ 180 (325)
.. ..++..... ..|.|.+++..|+|.|+|.+.+..+. ....+.+.+..++. +..... ...+.+|+
T Consensus 140 ~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~------~~~~~~~~~~~~~~g~ 210 (291)
T 2wim_A 140 TTISDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPA------ISMPQKSFNATAERGE 210 (291)
T ss_dssp CBCCCSSEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCC------CBCSCSEEECCSSSCC
T ss_pred cccCCceEEEccC---CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCc------cccCcccccceecCCC
Confidence 54 334443322 35999999999999999999987643 33455666665533 222221 23467899
Q ss_pred cEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 181 SVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 181 ~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
.+.|.|.+.+.|. +.+.|++++..+........ ...+ ..|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 211 ~~~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~--~~~~------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 280 (291)
T 2wim_A 211 EMTFSCRASGSPE--PAISWFRNGKLIEENEKYIL--KGSN------TELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 280 (291)
T ss_dssp EEEEECBCCCBSC--CEEEEEETTEECCCTTTEEE--CSTT------CEEEEESCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEeecCCC--CeEEEEECCEECcCCccEEE--cCCc------cEEEEeeCCcccCEEEEEEEEECCCceeeeEEE
Confidence 9999999999887 89999999998876543321 1222 479999999999999999999999999999999
Q ss_pred EEEee
Q psy1095 261 IVDVV 265 (325)
Q Consensus 261 ~v~~~ 265 (325)
.|...
T Consensus 281 ~v~~~ 285 (291)
T 2wim_A 281 QVFVQ 285 (291)
T ss_dssp EC---
T ss_pred EEEEe
Confidence 88443
No 54
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.1e-29 Score=207.91 Aligned_cols=239 Identities=15% Similarity=0.118 Sum_probs=174.3
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCccccccccccc--ccccCCCCeeEecCCceEecCCCeEEEEEEE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIR--TRRLTSSPRFYAVPHNKICDLGDTVRFQCSV 89 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~--~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~ 89 (325)
.++|.+++..+... .....+|.|.+++.+|+|.|+|.+.++... .+.+..+|.+...+....+.+|+.+.|.|.+
T Consensus 39 ~i~W~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~ 115 (290)
T 2o26_X 39 FVRWTFKTYFNEMV---ENKKNEWIQEKAEATRTGTYTCSNSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPL 115 (290)
T ss_dssp EEEEEEECSSSCEE---EECSSEEEETTCCGGGCEEEEEEESSSCEEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCB
T ss_pred cEEEecCCcceeee---cCCCceEEEeccCHHhCeEEEEEeeCCccEEEEEEEeCCCcccccccceEEecCCeEEEeCcC
Confidence 56788888766111 112278999999999999999999883211 2333356655566677788899999999999
Q ss_pred EecCC-CeeEEe-eCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCe-EEEEEEEeCCeeEE-EEEEEEEECCCcccCCC
Q psy1095 90 TGQPA-PWTSWS-KDGKPATPNARVTIREKEDLRFLEISEVTLEDAG-LYTIKVENNYGSVE-ATARLEIMDPRAIISRP 165 (325)
Q Consensus 90 ~~~p~-~~v~W~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~p 165 (325)
.+ |. +.++|+ +++..+....++..... ..|.|.+++.+|+| .|+|.+.|..+... ..+.|.|.... ..+|
T Consensus 116 ~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~--~~~P 189 (290)
T 2o26_X 116 TD-PQVSQYSLIECDGKSLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI--KAIP 189 (290)
T ss_dssp SC-CSCEEEEEEETTSCCCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC--CSCC
T ss_pred CC-CCCceEEEEeCCCcCCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC--CCCC
Confidence 85 77 899995 68888876655554433 25999999999999 99999999866533 34677776321 2357
Q ss_pred eeeecCcCeeEecCCcEEEEEEEEecCCCCCe-eEEeeCCEEe----ccCCCCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 166 KVLNGLENLRCCDGDSVTFECQVQVVPPNDHD-ISWFRNNRLI----KLDSDMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 166 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~-~~W~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
.+...+....+.+|+.+.|.|.+.+.|. +. +.|++++..+ ........ .........+.|.|.+++.+|+
T Consensus 190 ~i~~~~~~~~v~~G~~v~l~C~~~g~p~--p~~i~W~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~I~~v~~~d~ 264 (290)
T 2o26_X 190 VVSVPETSHLLKKGDTFTVVCTIKDVST--SVNSMWLKMNPQPQHIAQVKHNSWH---RGDFNYERQETLTISSARVDDS 264 (290)
T ss_dssp EEECSCSBCCCCTTCCEEEEEEEEESST--TCEEEEEEESSSEEECCCEECCEEE---EETTEEEEEEEEEESSCCSSSC
T ss_pred ccccCCCcceEecCCcEEEEEEEecCCc--ceeEEEecCCCCCccceeecccccc---cCceeeEEEEEEEEcCCCcccC
Confidence 7766666678889999999999999887 65 9999998763 22221111 1111122457899999999999
Q ss_pred eEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 241 GEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
|.|+|.|.|..|.....+.|.|..
T Consensus 265 G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 265 GVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp EEEEEEEECSSCEEEEEEEECC--
T ss_pred eEEEEEEeCCCCcEEEEEEEEEEe
Confidence 999999999999998888887743
No 55
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=6.5e-29 Score=207.23 Aligned_cols=218 Identities=17% Similarity=0.129 Sum_probs=158.2
Q ss_pred CCCCCCcccCCCCCCCcccccccccc------cccccCCCCeeEecCCceEecCCCeEEEEEEEE-ecCCCeeEEeeCCe
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAI------RTRRLTSSPRFYAVPHNKICDLGDTVRFQCSVT-GQPAPWTSWSKDGK 104 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~~~~~ 104 (325)
..+|.|.+++.+|+|.|+|.+..... ..+.+..+|.+...+....+..|+.+.+.|.+. +.|.+.+.|++++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 35789999999999999998743221 123445678777777777788899999999875 68999999999987
Q ss_pred eCCCCCcEEEEecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeE--EEEEEEEEECCCcccCCCeeeecC-cCeeEec
Q psy1095 105 PATPNARVTIREKED---LRFLEISEVTLEDAGLYTIKVENNYGSV--EATARLEIMDPRAIISRPKVLNGL-ENLRCCD 178 (325)
Q Consensus 105 ~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~-~~~~v~~ 178 (325)
.+...........+. ...|.|.....+|.|.|+|.+.|..+.. ...+.|.|..+ |.+.... ....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~------P~v~~~~~~~~~~~~ 231 (313)
T 4fqp_A 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYP------PEVSISGYDNNWYLG 231 (313)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEE------EEEEEECCCSCEETT
T ss_pred cccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccC------CccccccccceeecC
Confidence 664332222111111 2358899999999999999999876543 34445555433 4443333 3345667
Q ss_pred CCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEE
Q psy1095 179 GDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSA 258 (325)
Q Consensus 179 g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 258 (325)
|+.+.|.|.+.|+|.+ ..+.|++++..+.... . ..+ ..|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 232 g~~v~l~C~~~g~P~p-~~v~W~~~~~~l~~~~-----~-~~~------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 298 (313)
T 4fqp_A 232 QNEATLTCDARSNPEP-TGYNWSTTMGPLPPFA-----V-AQG------AQLLIRPVDKPINTTLICNVTNALGARQAEL 298 (313)
T ss_dssp CCCEEEEEEEEEESCC-CEEEEEETTBSCCTTE-----E-EET------TEEEECCCSSCCEEEEEEEEECSSCEEEEEE
T ss_pred CCeEEEEEEecCCCCC-cEEEEEECCEECCCce-----E-EeC------CEEEECcCChhhCEEEEEEEEeCCCcEEEEE
Confidence 8999999999999872 3799999998775321 1 112 3799999999999999999999999999999
Q ss_pred EEEEEeeCCe
Q psy1095 259 CLIVDVVKGK 268 (325)
Q Consensus 259 ~l~v~~~~~~ 268 (325)
.|.|...++.
T Consensus 299 ~l~V~~~PP~ 308 (313)
T 4fqp_A 299 TVQVKEGPPH 308 (313)
T ss_dssp EEEEECCC--
T ss_pred EEEEEeCCCC
Confidence 9988766553
No 56
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.96 E-value=2.5e-27 Score=184.05 Aligned_cols=191 Identities=28% Similarity=0.425 Sum_probs=154.2
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCC-CcEEEEe-cCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPN-ARVTIRE-KEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+.. .++...|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5789999999999999999999999999999999999999988654 3554443 4555689999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+..+.....+.|.|...+... .|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+.....+... ..+
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~-~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~--~~~ 157 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIH-LPKTLEGMGAVHALRGEVVSIKIPFSGKPD--PVITWQKGQDLIDNNGHYQVI--VTR 157 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEEC-CSSCBTTBEEEEEETTCCCEEEEEEEEESC--CEEEEEESSCEECSSSSCEEE--ECS
T ss_pred ECCCceeEEEEEEEcCCCcCC-CCccccccCeEEEeCCCEEEEEEEEEecCC--CcEEEEECCEEeecCCCEEEE--EcC
Confidence 998888888888887654432 222233334456788999999999999988 899999999988755544332 222
Q ss_pred CcceeEEEEEeCC-CCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 222 KENLVIARLKIPH-VYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 222 ~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
....|.|.+ +..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 158 ----~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 158 ----SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ----SEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ----CceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 346899999 99999999999999999998888888773
No 57
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.96 E-value=6.7e-27 Score=183.90 Aligned_cols=192 Identities=26% Similarity=0.455 Sum_probs=155.8
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCC-CCCcEEEEe-cCCeEEEEEccCCC-CCCeEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPAT-PNARVTIRE-KEDLRFLEISEVTL-EDAGLYTIKV 140 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~-~d~G~Y~C~~ 140 (325)
.||.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+. ...++.+.. .++...|.|.+++. .|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 68999999999999999999999999999999999999999986 445665543 34557899999999 9999999999
Q ss_pred EeCCee-EEEEEEEEEECCCcc-cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEE
Q psy1095 141 ENNYGS-VEATARLEIMDPRAI-ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQ 218 (325)
Q Consensus 141 ~~~~~~-~~~~~~l~v~~~~~~-~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 218 (325)
.|..+. ....+.|.|...+.. ...|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+........ .
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~--~ 160 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPT--PNIYWIKNQTKVDMSNPRYS--L 160 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSC--CEEEEEETTEECCTTSTTEE--E
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCC--CeEEEEECCeEcccCCCeEE--c
Confidence 998887 677888888765332 12366776666778889999999999999888 88999999998875433221 1
Q ss_pred ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE-EEEEEEeeC
Q psy1095 219 VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS-ACLIVDVVK 266 (325)
Q Consensus 219 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~ 266 (325)
..+ .|.|.+++.+|+|.|+|.|.|..|..... +.|.|....
T Consensus 161 ~~~-------~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 161 KDG-------FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp ETT-------EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCC-------eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 233 89999999999999999999999988765 788885443
No 58
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.96 E-value=8.8e-30 Score=237.45 Aligned_cols=208 Identities=15% Similarity=0.164 Sum_probs=89.3
Q ss_pred CCCCCCcccCCCCCCCccccccccccccc------cc--CCCCeeEecCCc-eEecCCCeEEEEEEEEe--cCCCeeEEe
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRTR------RL--TSSPRFYAVPHN-KICDLGDTVRFQCSVTG--QPAPWTSWS 100 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~------~~--~~~p~~~~~~~~-~~v~~g~~v~l~C~~~~--~p~~~v~W~ 100 (325)
...|.|.+++.+|+|.|+|.+.+...... .+ ..+|.+...|.. ..+.+|++++|.|.+.+ .+.+.+.|+
T Consensus 182 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~ 261 (772)
T 3v2a_R 182 KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 261 (772)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEE
T ss_pred CCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEe
Confidence 45678999999999999999975433211 11 133445555544 68999999999999987 456789999
Q ss_pred eCCeeCCCCCcEEEE--------ecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCc
Q psy1095 101 KDGKPATPNARVTIR--------EKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLE 172 (325)
Q Consensus 101 ~~~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~ 172 (325)
+++..+......... .......|.|.+++.+|+|.|+|.+.+..+.....+.|.|...|.+...+ ....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~ 338 (772)
T 3v2a_R 262 YPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGS---GMES 338 (772)
T ss_dssp CC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC------------
T ss_pred cCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEecc---CCCC
Confidence 998876543222111 01124579999999999999999999988877888888888764321111 1123
Q ss_pred CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
...+.+|+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.+++.+|+|.|+|.|.|..+
T Consensus 339 ~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~g~~l~~~~~~~-----------~~~~L~i~~v~~~d~G~Y~C~a~n~~g 405 (772)
T 3v2a_R 339 LVEATVGERVRIPAKYLGYPP--PEIKWYKNGIPLESNHTIK-----------AGHVLTIMEVSERDTGNYTVILTNPIS 405 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEcCCCcEEEEEEEeeeCC--CeEEEEECCEeCCCCceEc-----------cceeEEEecCChhcCceEEEEEEECCc
Confidence 456788999999999999887 7899999998776432211 125899999999999999999999887
Q ss_pred cEE
Q psy1095 253 EVV 255 (325)
Q Consensus 253 ~~~ 255 (325)
...
T Consensus 406 ~~~ 408 (772)
T 3v2a_R 406 KEK 408 (772)
T ss_dssp ---
T ss_pred CeE
Confidence 654
No 59
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.96 E-value=2.1e-28 Score=210.18 Aligned_cols=224 Identities=22% Similarity=0.255 Sum_probs=168.7
Q ss_pred eeeecccCCCCcccCC------CCCCCCCCCCCcccCCCCC-CCcccccccccccc---------cccCCC-----CeeE
Q psy1095 11 LSVKLTRPSGLMSGHS------TPRSTPRSTPPRSISPLSS-RTFTPYSLNSAIRT---------RRLTSS-----PRFY 69 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~------~~~~~~~~l~i~~v~~~d~-G~Y~c~~~~~~~~~---------~~~~~~-----p~~~ 69 (325)
..+.|.+++....... .......+|.|.+++.+|+ |.|+|.+.+..... ..+..+ |.+.
T Consensus 136 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~ 215 (388)
T 2v5m_A 136 EVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTP 215 (388)
T ss_dssp EEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECC
T ss_pred ceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCc
Confidence 5678888876653221 1112245789999999999 99999997753211 111122 1111
Q ss_pred -ecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC------CCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 70 -AVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA------TPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 70 -~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
....+..+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++... ...|.|.+++.+|+|.|+|.+.|
T Consensus 216 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n 291 (388)
T 2v5m_A 216 ALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV----SGTLIIKDAVVEDSGKYLCVVNN 291 (388)
T ss_dssp SSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEE----TTEEEESSCCGGGCEEEEEEEEC
T ss_pred cccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecc----cCEEEECcCCHHHCeEEEEEEec
Confidence 1223456889999999999999999999999975432 222233221 13699999999999999999999
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
..|.....+.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..+.
T Consensus 292 ~~g~~~~~~~l~V~~~------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~i~W~~~g~~i~~~~----------- 352 (388)
T 2v5m_A 292 SVGGESVETVLTVTAP------LSAKIDPPTQTVDFGRPAVFTCQYTGNPI--KTVSWMKDGKAIGHSE----------- 352 (388)
T ss_dssp SSCEEEEEEEEEEEEE------EEEEEESSEEEECTTSCEEEEEEEEEECC--CEEEEEETTEECSCCS-----------
T ss_pred CCCceeEEEEEEEeCC------CccccCCCcEEecCCCCEEEEEEeccccC--CeEEEEECCEECccCC-----------
Confidence 9998888888888764 44455555677889999999999999998 8999999999875432
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
..|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 353 -----~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 353 -----SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp -----SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred -----CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 37999999999999999999999999998888876
No 60
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=211.45 Aligned_cols=247 Identities=15% Similarity=0.171 Sum_probs=174.4
Q ss_pred cCCCCeeEecCCceEecCCCeEEEEEEEE-------ecCCCeeEEeeCCeeC--CCCCcEEEEecCCeEEEEEccCCCCC
Q psy1095 62 LTSSPRFYAVPHNKICDLGDTVRFQCSVT-------GQPAPWTSWSKDGKPA--TPNARVTIREKEDLRFLEISEVTLED 132 (325)
Q Consensus 62 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-------~~p~~~v~W~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d 132 (325)
....|.+...|....+.+|+++.|.|.+. +.|.+.+.|++++..+ .......+...+ ..|.|.+++.+|
T Consensus 15 ~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D 92 (339)
T 3o4o_C 15 ARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQD--GALWLLPALQED 92 (339)
T ss_dssp ---CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEET--TEEEESSBCTTC
T ss_pred chhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeC--CeEEECCCCccc
Confidence 33578888999999999999999999997 8888999999999874 332122222222 269999999999
Q ss_pred CeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEE-----EEecCCCCCeeEEeeCCEEe
Q psy1095 133 AGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQ-----VQVVPPNDHDISWFRNNRLI 207 (325)
Q Consensus 133 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~-----~~~~~~~~~~~~W~~~~~~~ 207 (325)
+|.|+|.+.+..+.....+.|.|...+... .........+.+|+.+.|.|. +.+.|. +.+.|++++..+
T Consensus 93 ~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~----~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~--~~v~W~k~g~~~ 166 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDKMSIELRVFENTDAF----LPFISYPQILTLSTSGVLVCPDLSEFTRDKTD--VKIQWYKDSLLL 166 (339)
T ss_dssp CEEEECCEEETTEEEEEEEEEEEECSCGGG----HHHHCEEEEEETTSCEEEECCSCTTTCCSSSC--CCBCCEESSCBC
T ss_pred CEEEEEEEECCcceEEEEEEEEEEcCCCcc----ccccccceEEECCCCEEEEecCCcccccCCCC--ceEEEecCCeeC
Confidence 999999999998888888888888764321 011112346789999999999 677777 899999999887
Q ss_pred ccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC----cEEeEEEEEEEeeC----CeecC--------
Q psy1095 208 KLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG----EVVTSACLIVDVVK----GKDLT-------- 271 (325)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~----~~~~~-------- 271 (325)
......... ..+ ...|.|.+++.+|+|.|+|.|.|..+ .....+.|.|.... +..+.
T Consensus 167 ~~~~~~~~~--~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~ 239 (339)
T 3o4o_C 167 DKDNEKFLS--VRG-----TTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISAS 239 (339)
T ss_dssp CTTCSSEEE--CTT-----SSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCC
T ss_pred CCCCceeEE--cCC-----cceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEec
Confidence 654322111 111 13799999999999999999999877 34556667664321 01000
Q ss_pred ----------C---CC---ceEE-EEeCC----------------------------EEEEEEcCCCCCCC-eEEEEEEE
Q psy1095 272 ----------S---DG---RLNI-ITVGG----------------------------TSVLTIEDITGDDS-GKYQVHVS 305 (325)
Q Consensus 272 ----------~---~~---~~~~-~~~~~----------------------------~~~l~i~~v~~~d~-G~Y~C~a~ 305 (325)
. .+ ...+ +..++ ...|.|.++..+|+ |.|+|.|.
T Consensus 240 ~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 319 (339)
T 3o4o_C 240 LGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVH 319 (339)
T ss_dssp CCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEE
T ss_pred cCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEE
Confidence 0 11 1111 11111 11699999999997 99999999
Q ss_pred CCCeeEEeEEEEEEeccc
Q psy1095 306 NQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 306 n~~g~~~~~~~l~V~~~p 323 (325)
|..|..++.++|.+..+.
T Consensus 320 N~~G~~~~~~~~~~~~~~ 337 (339)
T 3o4o_C 320 NTLSFQTLRTTVKEHHHH 337 (339)
T ss_dssp ETTEEECCBCCCCC----
T ss_pred eccCceEEEEEhhHhccc
Confidence 999999999988876553
No 61
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.96 E-value=3.4e-27 Score=183.26 Aligned_cols=191 Identities=18% Similarity=0.319 Sum_probs=156.5
Q ss_pred cCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 62 LTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 62 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
+..+|.+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+...+...+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEE
Confidence 34678899999999999999999999999999999999999999988888888877777889999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+..+.......|.|...+...... .......+..|+.+.|.|.+.+.|. +.+.|++++..+......... ..+
T Consensus 84 n~~~~~~~~~~l~v~~~p~~~~~~---~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~~--~~~ 156 (197)
T 3lcy_A 84 NEVGEVETSSKLLLQATPQFHPGY---PLKEKYYGAVGSTLRLHVMYIGRPV--PAMTWFHGQKLLQNSENITIE--NTE 156 (197)
T ss_dssp CSSCEEEEEEEEEEEEEEEECTTS---CCCSEEEEETTSCEEEEEEEEEESC--CEEEEEETTEECCCCSSEEEE--ECS
T ss_pred CCCCceeEEEEEEEEcCCCCCCCc---cCCcceeecCCCeEEEEEEEeeeeC--CeeEEeECCEECCCCCceEEE--EcC
Confidence 988887777888887653321110 1123346788999999999999988 899999999988765543332 222
Q ss_pred CcceeEEEEEeCCCCC-CCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 222 KENLVIARLKIPHVYP-EDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
....|.|.++.. +|+|.|+|.|.|..|.....+.|.|.
T Consensus 157 ----~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 157 ----HYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp ----SEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ----CEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 236899999995 89999999999999999888888774
No 62
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=4.4e-28 Score=208.64 Aligned_cols=210 Identities=22% Similarity=0.372 Sum_probs=164.3
Q ss_pred CCCCCCcccCCCCCC---Ccccccccccccccc---------c---------CCCCeeEecCCceEecCCCeEEEEEEEE
Q psy1095 32 PRSTPPRSISPLSSR---TFTPYSLNSAIRTRR---------L---------TSSPRFYAVPHNKICDLGDTVRFQCSVT 90 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G---~Y~c~~~~~~~~~~~---------~---------~~~p~~~~~~~~~~v~~g~~v~l~C~~~ 90 (325)
..+|.|.+++.+|+| .|+|.+.+..+.... + ..+|.+ .+....+.+|+.+.|.|.+.
T Consensus 160 ~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~ 237 (395)
T 1bih_A 160 DGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYG 237 (395)
T ss_dssp TSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEE
T ss_pred CCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEec
Confidence 457889999999999 999999876554210 0 012333 35667789999999999999
Q ss_pred ecCCCeeEEeeCCeeCCCCCcEEEE--ecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE-EEEEEEECCCcccCCCee
Q psy1095 91 GQPAPWTSWSKDGKPATPNARVTIR--EKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA-TARLEIMDPRAIISRPKV 167 (325)
Q Consensus 91 ~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~p~~ 167 (325)
+.|.+.+.|++++..+.......+. .......|.|.+++.+|+|.|+|.+.|..+.... .+.|.|..+ |.+
T Consensus 238 g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~------P~~ 311 (395)
T 1bih_A 238 SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSA------PKY 311 (395)
T ss_dssp CSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEE------EEE
T ss_pred cCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcC------Ccc
Confidence 9999999999999988654322222 1222347999999999999999999998886544 778888765 555
Q ss_pred eecCcC-eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEE
Q psy1095 168 LNGLEN-LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCR 246 (325)
Q Consensus 168 ~~~~~~-~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 246 (325)
...+.. ..+.+|+.+.|.|.+.|.|. +.+.|++++..+..+ + .. ... ..|.|.+++.+|+|.|+|.
T Consensus 312 ~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~-~--~~-~~~-------~~L~i~~~~~~d~G~Y~C~ 378 (395)
T 1bih_A 312 EQKPEKVIVVKQGQDVTIPCKVTGLPA--PNVVWSHNAKPLSGG-R--AT-VTD-------SGLVIKGVKNGDKGYYGCR 378 (395)
T ss_dssp EECCCSEEEECTTSCEEEECEEEEESC--CCCEEEETTEECCSS-S--EE-EET-------TEEEESSCCSTTCEEEEEE
T ss_pred ccCCCcceEecCCCeEEEEEEECcccC--CeeEEEECCEECCCC-c--eE-EEC-------CEEEEeeCCcccCEEEEEE
Confidence 555555 67889999999999999988 789999999987643 2 11 122 2899999999999999999
Q ss_pred EEeCCCcEEeEEEEEE
Q psy1095 247 VANELGEVVTSACLIV 262 (325)
Q Consensus 247 ~~~~~~~~~~~~~l~v 262 (325)
|.|..|.....+.|.|
T Consensus 379 a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 379 ATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEccCCCceEEEEEEE
Confidence 9999999988888876
No 63
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=1.6e-27 Score=196.45 Aligned_cols=236 Identities=17% Similarity=0.227 Sum_probs=161.8
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.+...+....+.+|++++|.|.+.+ .+.|++++... ...........|.|.+++.+|+|.|+|.+.+.
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 4677777788888999999999999876 49999776432 12222334467999999999999999999887
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee-CCEEeccCCCCceEEEecCC
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR-NNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~ 222 (325)
.+.....+.|.|...+. + +...+....+.+|+.+.|.|.+.+.+.+ ..+.|++ ++..+........ ...+
T Consensus 74 ~~~~~~~~~l~V~~~~~----~-~~~~~~~~~v~~g~~v~L~C~~~~~~~~-~~v~W~~~~~~~~~~~~~~~~--~~~~- 144 (289)
T 3ejj_X 74 PMAGSTTIHLYVKDPAH----S-WNLLAQEVTVVEGQEAVLPCLITDPALK-DSVSLMREGGRQVLRKTVYFF--SPWR- 144 (289)
T ss_dssp ----CEEEEEEECCSSC----S-EEESCSEEEEETTSCEEECEEESCGGGG-GSEEEEEGGGEECCTTCCEEE--ETTT-
T ss_pred CCcceeEEEEEEeCCCc----c-eecccceEEEecCCceEeEEEccCCCcc-eEEEEEecCCeecCCCccEEE--CCCC-
Confidence 77777778888876532 2 4444466788899999999999886652 3499986 5555544333221 2233
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEE-eCCCcEEeEEEEEEEee---CCe--------ecCCCCce-------------E
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVA-NELGEVVTSACLIVDVV---KGK--------DLTSDGRL-------------N 277 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~l~v~~~---~~~--------~~~~~~~~-------------~ 277 (325)
.|.|.+++.+|+|.|+|.+. +..+.....+.|.|... ++. .+..+... .
T Consensus 145 ------~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 218 (289)
T 3ejj_X 145 ------GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFN 218 (289)
T ss_dssp ------EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCE
T ss_pred ------CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceE
Confidence 69999999999999999999 44444455566666421 110 00001100 0
Q ss_pred -EEEeCC------------------EEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 278 -IITVGG------------------TSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 278 -~~~~~~------------------~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
.+..++ ...|.|.+++.+|+|.|+|.|.|..|..++++.|.+..++
T Consensus 219 i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 219 VILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp EEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred EEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 011111 3579999999999999999999999999999999998765
No 64
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=205.42 Aligned_cols=241 Identities=15% Similarity=0.210 Sum_probs=159.2
Q ss_pred CceEecCCCeEEEEEEEEe-cCCCeeEEeeCCeeCC---------------C--CCcEEEEe-cCCeEEEEEccCCCCCC
Q psy1095 73 HNKICDLGDTVRFQCSVTG-QPAPWTSWSKDGKPAT---------------P--NARVTIRE-KEDLRFLEISEVTLEDA 133 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~-~p~~~v~W~~~~~~~~---------------~--~~~~~~~~-~~~~~~l~i~~~~~~d~ 133 (325)
..+++.+|++++|.|.+.+ .+.+.++|+|++.... . ..+..... .....+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3567889999999999865 3455799998643211 0 11222211 12235699999999999
Q ss_pred eEEEEEEEeC-CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeEEeeCCEEeccCC
Q psy1095 134 GLYTIKVENN-YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDISWFRNNRLIKLDS 211 (325)
Q Consensus 134 G~Y~C~~~~~-~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~W~~~~~~~~~~~ 211 (325)
|.|+|.+.+. .+.......+.+...+. +.+...+.......|+.+.|.|.+ .+.|. +.+.|++++..+....
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~--~~i~W~~~~~~~~~~~ 160 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPT----VSLIKGPDSLIDGGNETVAAICIAATGKPV--AHIDWEGDLGEMESTT 160 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCE----EEEEECSSCCCTTCSCEEEEEEEEEEEBSC--CEEEECCCSSBCCEEE
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccc----cccccccceeEEcCCceEEEEEEecCCcCC--ceEEEEECCccccccc
Confidence 9999999875 45666667777766532 222333334445568899999976 56777 8999999987764321
Q ss_pred CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe--EEEEEEEeeCCeecC--------CCCce-----
Q psy1095 212 DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT--SACLIVDVVKGKDLT--------SDGRL----- 276 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v~~~~~~~~~--------~~~~~----- 276 (325)
. ..........+.|.|..+..+|.|.|+|.|.|..+.... .+.|.|...+...+. .+..+
T Consensus 161 ~-----~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~ 235 (308)
T 4fom_A 161 T-----SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCN 235 (308)
T ss_dssp E-----ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECC
T ss_pred c-----eeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEE
Confidence 1 111122234468999999999999999999998765443 333333222211110 00000
Q ss_pred --------EE-EEe-----------CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 277 --------NI-ITV-----------GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 277 --------~~-~~~-----------~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
.+ +.. .+...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|.
T Consensus 236 ~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 236 ADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 11 111 1234677889999999999999999999999999999999984
No 65
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.96 E-value=2.1e-26 Score=181.05 Aligned_cols=197 Identities=23% Similarity=0.386 Sum_probs=152.1
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEe-cCCeEEEEEccC-CCCCCeEEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIRE-KEDLRFLEISEV-TLEDAGLYTIKV 140 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~-~~~d~G~Y~C~~ 140 (325)
..+|.|...|.+..+.+|+++.|.|.+.+.|.+.+.|++++..+.......... ......|.|.++ +.+|+|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 457899999999999999999999999999999999999999987654333332 234567999999 599999999999
Q ss_pred EeCCeeEEEEEEEEEECCCcc-cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCC-CceEEE
Q psy1095 141 ENNYGSVEATARLEIMDPRAI-ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSD-MKPEVQ 218 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~~~~-~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~-~~~~~~ 218 (325)
.|..+.....+.|.|...+.. ...|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+..... ......
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--p~v~W~~~g~~l~~~~~~~~~~~~ 161 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPD--PEITWFKDFLPVDTSNNNGRIKQL 161 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSC--CEEEEEETTEEC------CCEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCC--CeEEEEECCccccCcCCCceEEEE
Confidence 999988888888888765322 22366666666778889999999999999888 89999999998865421 111111
Q ss_pred ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe-EEEEEEEee
Q psy1095 219 VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT-SACLIVDVV 265 (325)
Q Consensus 219 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~ 265 (325)
..+ ....|.|.+++.+|+|.|+|.|.|..|.... .+.|.+.+.
T Consensus 162 ~~~----~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 162 RSE----SIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp EET----TEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred ecC----CeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 111 2478999999999999999999999997654 456666443
No 66
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=2e-27 Score=199.72 Aligned_cols=249 Identities=18% Similarity=0.213 Sum_probs=165.6
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEec----CCCeeEEeeCCe---------------eC--CCCCcEEEE-ecCCeEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQ----PAPWTSWSKDGK---------------PA--TPNARVTIR-EKEDLRF 122 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~----p~~~v~W~~~~~---------------~~--~~~~~~~~~-~~~~~~~ 122 (325)
++.+...|....+.+|+++.|.|.+.+. +.+.+.|++++. .+ ....++.+. ......+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 4455566777889999999999998775 445799999541 11 122344433 1223456
Q ss_pred EEEccCCCCCCeEEEEE-EEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecC---CcEEEEEE-EEecCCCCCe
Q psy1095 123 LEISEVTLEDAGLYTIK-VENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDG---DSVTFECQ-VQVVPPNDHD 197 (325)
Q Consensus 123 l~i~~~~~~d~G~Y~C~-~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g---~~v~l~C~-~~~~~~~~~~ 197 (325)
|.|.+++.+|+|.|+|. +.+..+.....+.|.|...+.. .+........+.+| +.+.|.|. +.+.|. +.
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~----~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~--~~ 167 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTN----WIEGTQAVLRAKKGQDDKVLVATCTSANGKPP--SV 167 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEE----EEEECSSCEEECTTCCCCEEEEEEEEEEEBSC--CE
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcc----eeecCCCceeecCCCccceEEEEEEecCCcCC--ce
Confidence 99999999999999998 4566677777888888875321 11223445667778 77999997 778887 89
Q ss_pred eEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCee--------
Q psy1095 198 ISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKD-------- 269 (325)
Q Consensus 198 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-------- 269 (325)
+.|++++...... ......+......+.|.|.++..+|+|.|+|.|.|..+.....+.|.|...+...
T Consensus 168 i~W~~~~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~ 243 (331)
T 3u83_A 168 VSWETRLKGEAEY----QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNW 243 (331)
T ss_dssp EEEEESSCCEEEE----EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCC
T ss_pred EEEEcCCCCcccc----ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCce
Confidence 9999953221110 0011112222344689999999999999999999998887777777764433211
Q ss_pred cCCCCce--------------EEEEeCC----------EEEEEEc-CCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 270 LTSDGRL--------------NIITVGG----------TSVLTIE-DITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 270 ~~~~~~~--------------~~~~~~~----------~~~l~i~-~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
+..+... ..+..++ ...|.|. ++..+|+|.|+|.|.|..|..+..+.|.|.+.+
T Consensus 244 ~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 244 YLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp BTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred EeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 1111111 1111111 1369999 899999999999999999999999999998765
No 67
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.96 E-value=7.9e-28 Score=224.29 Aligned_cols=286 Identities=16% Similarity=0.157 Sum_probs=123.5
Q ss_pred CCCCCCcccCCCCCCCcccccccccc-c--ccccC--CCCeeE---ecCCceEecCC--CeEEEEEEEEecCCCeeEEee
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAI-R--TRRLT--SSPRFY---AVPHNKICDLG--DTVRFQCSVTGQPAPWTSWSK 101 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~-~--~~~~~--~~p~~~---~~~~~~~v~~g--~~v~l~C~~~~~p~~~v~W~~ 101 (325)
..+|.|.+++.+|+|.|+|.+..... . .+.+. .+|.+. ..+....+.+| +.++|.|.+.+ |.+.+.|++
T Consensus 85 ~~~l~I~~~~~~d~G~Y~C~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~ 163 (772)
T 3v2a_R 85 CKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCA 163 (772)
T ss_dssp -----------------------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEE
T ss_pred EEEEEECCCcHhhCEeEEEEEcCCCEEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEEEe
Confidence 45889999999999999999863321 1 12222 222221 22445678889 89999999976 778999999
Q ss_pred C--CeeCCCC-CcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEE-EEEEEECCCcccCCCeeeecCc-CeeE
Q psy1095 102 D--GKPATPN-ARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEAT-ARLEIMDPRAIISRPKVLNGLE-NLRC 176 (325)
Q Consensus 102 ~--~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~~~p~~~~~~~-~~~v 176 (325)
+ +..+... ....... ...|.|.+++.+|.|.|+|.+.+........ ..+.+... ..+.+...+. ...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~----~~~~v~~~~~~~~~v 236 (772)
T 3v2a_R 164 RYPEKRFVPDGNRISWDS---KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGY----RIYDVVLSPSHGIEL 236 (772)
T ss_dssp ETTTEEECCCSSSCEEET---TTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECC----CEEEEEEECCSCEEE
T ss_pred cCCCccccCCCceeecCC---CCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecC----ccceeeeCCCCceEE
Confidence 7 5554333 2222221 2359999999999999999998765533322 33334332 1233333333 3578
Q ss_pred ecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEe--cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 177 CDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQV--DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 177 ~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
.+|+.+.|.|.+.+.+.+.+.+.|++++..+............ ........+.|.|.+++.+|+|.|+|.+.|..+..
T Consensus 237 ~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 316 (772)
T 3v2a_R 237 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTK 316 (772)
T ss_dssp ETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEE
T ss_pred ecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcce
Confidence 9999999999999865433789999998876543221110000 00112245789999999999999999999998888
Q ss_pred EeEEEEEEEeeCCeecC----------CCCce------------EE-EEeC-----------CEEEEEEcCCCCCCCeEE
Q psy1095 255 VTSACLIVDVVKGKDLT----------SDGRL------------NI-ITVG-----------GTSVLTIEDITGDDSGKY 300 (325)
Q Consensus 255 ~~~~~l~v~~~~~~~~~----------~~~~~------------~~-~~~~-----------~~~~l~i~~v~~~d~G~Y 300 (325)
...+.|.|...+...+. .+..+ .+ +..+ +...|.|.++..+|+|.|
T Consensus 317 ~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y 396 (772)
T 3v2a_R 317 KNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNY 396 (772)
T ss_dssp EEEEEEEEECCCC-------------------------------------------------------------------
T ss_pred eEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceE
Confidence 87888887554321111 00000 00 1111 226799999999999999
Q ss_pred EEEEECCCeeE--EeEEEEEEecccCC
Q psy1095 301 QVHVSNQHGSD--SCYASVAVEGRKII 325 (325)
Q Consensus 301 ~C~a~n~~g~~--~~~~~l~V~~~p~i 325 (325)
+|.|.|..|.. +..+.|.|..+|.|
T Consensus 397 ~C~a~n~~g~~~~s~~~~l~v~~~P~~ 423 (772)
T 3v2a_R 397 TVILTNPISKEKQSHVVSLVVYVPPQI 423 (772)
T ss_dssp ---------------------------
T ss_pred EEEEEECCcCeEEEEEEEEEEecCCcc
Confidence 99999999865 44577888777754
No 68
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=4.7e-28 Score=199.91 Aligned_cols=222 Identities=14% Similarity=0.170 Sum_probs=162.6
Q ss_pred CCCCCcccCCCCCCCccccccccccc-----ccccCCCCe-eEecCCceEecCCCeEEEEEEEEecCC--CeeEEeeC-C
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR-----TRRLTSSPR-FYAVPHNKICDLGDTVRFQCSVTGQPA--PWTSWSKD-G 103 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~-----~~~~~~~p~-~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~v~W~~~-~ 103 (325)
.+|.|.+++.+|+|.|+|.+.+..+. .+.+..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +
T Consensus 51 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~ 129 (292)
T 4dkd_C 51 SILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRG 129 (292)
T ss_dssp EEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGG
T ss_pred EEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCC
Confidence 47889999999999999999875432 233445554 456677788999999999999987 43 78999997 5
Q ss_pred eeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEE-EEEEEEEECCCcccCCCeeeecCcCeeEecCCcE
Q psy1095 104 KPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVE-ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSV 182 (325)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v 182 (325)
..+....++...... .|.|.+++..|+|.|+|.+.+..+... ..+.|.|..... .+|.+...+....+.+|+.+
T Consensus 130 ~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~--~~p~i~~~~~~~~~~~g~~v 204 (292)
T 4dkd_C 130 RPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIP--GPPALTLVPAELVRIRGEAA 204 (292)
T ss_dssp CCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCC--SSCEEEEESSCBCCCSSSCE
T ss_pred CccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC--CCCeEEccCCceeEecCCCE
Confidence 555555555443333 399999999999999999998766443 367777775311 25777777766677899999
Q ss_pred EEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 183 TFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 183 ~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.|.|.+.+.+++ +.+.|++++..+....... .........+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 205 ~l~C~~~~~~~~-~~~~w~~~~~~~~~~~~~~----~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 279 (292)
T 4dkd_C 205 QIVCSASSVDVN-FDVFLQHNNTKLAIPQQSD----FHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRV 279 (292)
T ss_dssp EEEEEEEESSSC-CEEECCBSSCCCCCCBEEE----EETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEEecCCCCc-eEEEEeCCCcccccCccce----eccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEE
Confidence 999999987753 6789999887664332211 11111224468999999999999999999999999998888888
Q ss_pred Eee
Q psy1095 263 DVV 265 (325)
Q Consensus 263 ~~~ 265 (325)
...
T Consensus 280 ~~~ 282 (292)
T 4dkd_C 280 VES 282 (292)
T ss_dssp ---
T ss_pred eeC
Confidence 443
No 69
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=1.7e-27 Score=199.96 Aligned_cols=234 Identities=20% Similarity=0.245 Sum_probs=161.4
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEec---------CCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCe-E
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQ---------PAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAG-L 135 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~---------p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~ 135 (325)
...........+.+|+++.|.|.+.+. |.+.+.|+|++..+....+. .. ..+|.|.+++.+|+| .
T Consensus 30 ~c~~~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~---~~~L~i~~v~~~D~Gs~ 104 (329)
T 3oq3_B 30 SCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VK---NGDLWIANYTSNDSHRR 104 (329)
T ss_dssp TSEEEEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EE---TTEEEESSCCGGGGGCC
T ss_pred CcccCCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--ee---cceEEEcCCChHhCCCc
Confidence 333334456678999999999998774 55799999998776543332 11 236999999999999 9
Q ss_pred EEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecC-CCCCeeEEeeCCEEeccCCCCc
Q psy1095 136 YTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVP-PNDHDISWFRNNRLIKLDSDMK 214 (325)
Q Consensus 136 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~~~~~~W~~~~~~~~~~~~~~ 214 (325)
|+|.+.|..|.......+.+...+ |.+........+.+|+.+.|.|.+.+.| . +.+.|++++..+..... .
T Consensus 105 Y~C~a~n~~g~~~~~~~~~v~~~~-----p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~--~~i~W~k~~~~l~~~~~-~ 176 (329)
T 3oq3_B 105 YLCTVTTKNGDCVQGIVRSHIRKP-----PSCIPETYELGTHDKYGIDLYCGILYAKHY--NNITWYKNNQELIIDGT-K 176 (329)
T ss_dssp EEEEEECTTSCEEEEEEEEEECCC-----CSCEEEEEETTSSTTTCEEEECCCCSCCCC--CEEEEEETTEECCCSSS-S
T ss_pred EEEEEEeCCCceeeEEEEEEEcCC-----CcEeccccceEEeCCCcEEEEeccCCCCCC--ceEEEEECCccCCCCCc-e
Confidence 999999988755444433444432 2222222223456799999999999988 6 89999999998853332 2
Q ss_pred eEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeC--CCcEEeE----EEEEEEeeCC---e-------ecC-------
Q psy1095 215 PEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANE--LGEVVTS----ACLIVDVVKG---K-------DLT------- 271 (325)
Q Consensus 215 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~~----~~l~v~~~~~---~-------~~~------- 271 (325)
... .. ..|.|.+++.+|+|.|+|.|.|. .+..... +.|.|...+. + .+.
T Consensus 177 ~~~-~~-------~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l 248 (329)
T 3oq3_B 177 YSQ-SG-------QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANI 248 (329)
T ss_dssp EEE-ET-------TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEE
T ss_pred Eec-CC-------CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEE
Confidence 221 22 48999999999999999999987 5433332 5555543321 0 000
Q ss_pred -------C--CCceE-EEEeC---------------------CEEEEEEcCCCCCCCe-EEEEEEECCCeeEEeEEEEEE
Q psy1095 272 -------S--DGRLN-IITVG---------------------GTSVLTIEDITGDDSG-KYQVHVSNQHGSDSCYASVAV 319 (325)
Q Consensus 272 -------~--~~~~~-~~~~~---------------------~~~~l~i~~v~~~d~G-~Y~C~a~n~~g~~~~~~~l~V 319 (325)
+ ...+. .+..+ ....|.|.++..+|+| .|+|.|.|..|....++.|.|
T Consensus 249 ~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 249 TCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 1 01101 11111 2357999999999999 999999999999999999987
Q ss_pred e
Q psy1095 320 E 320 (325)
Q Consensus 320 ~ 320 (325)
+
T Consensus 329 ~ 329 (329)
T 3oq3_B 329 E 329 (329)
T ss_dssp C
T ss_pred C
Confidence 4
No 70
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.95 E-value=3.5e-26 Score=176.43 Aligned_cols=181 Identities=23% Similarity=0.370 Sum_probs=144.8
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEee-CCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSK-DGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
.+...|.+..+.+|+++.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.+++.+|+|.|+|.+.+..+
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 5667788889999999999999998877 899999 78888777788887777778899999999999999999999877
Q ss_pred eE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcc
Q psy1095 146 SV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKEN 224 (325)
Q Consensus 146 ~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
.. ...+.|.|... |.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+.............
T Consensus 83 ~~~~~~~~l~v~~~------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~v~W~~~~~~~~~~~~~~~~~~~~---- 150 (189)
T 2v44_A 83 QTQEATVVLEIYQK------LTFREVVSPQEFKQGEDAEVVCRVSSSPA--PAVSWLYHNEEVTTISDNRFAMLAN---- 150 (189)
T ss_dssp CEEEEEEEEEEECC------CEEESCCCSEEEETTSCEEECCEEECSSC--CEEEEEEEC--CEECCCTTEEECTT----
T ss_pred CcEEEEEEEEEecC------CceeecCCcEEEeCCCCEEEEEEECcCCC--CcEEEEECCcEEeccCCCCEEEecC----
Confidence 54 56777787765 45554555677899999999999999888 8999999998876433333322222
Q ss_pred eeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 225 LVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 225 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
..|.|.+++.+|+|.|+|.|.|..+.......+.|.
T Consensus 151 ---~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 151 ---NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp ---SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred ---CcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEE
Confidence 279999999999999999999998777655555543
No 71
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=9.1e-29 Score=206.51 Aligned_cols=228 Identities=17% Similarity=0.245 Sum_probs=158.4
Q ss_pred ceEecCCCeEEEEEEEEecC-CCeeEEeeCCeeCC----CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEE
Q psy1095 74 NKICDLGDTVRFQCSVTGQP-APWTSWSKDGKPAT----PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVE 148 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~~~p-~~~v~W~~~~~~~~----~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 148 (325)
.+.+.+|+++.|.|.+.+.| .+.+.|+|++..+. ...++... + ..|.|.+++.+|+|.|+|.+.|..+...
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH--K--EKLWFVPAKVEDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--S--SBEECTTCCGGGCSCCEECCCSSSCCCC
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc--C--CeEEECCCChhhCEEEEEEEeCCceEEE
Confidence 45688999999999998877 78999999986532 12233322 2 2699999999999999999998877666
Q ss_pred EEEEEEEECCCcccCCCeeeec---CcCeeEecCCcEEEEEEE------EecCCCCCeeEEeeCCEEeccCCCCceEEEe
Q psy1095 149 ATARLEIMDPRAIISRPKVLNG---LENLRCCDGDSVTFECQV------QVVPPNDHDISWFRNNRLIKLDSDMKPEVQV 219 (325)
Q Consensus 149 ~~~~l~v~~~~~~~~~p~~~~~---~~~~~v~~g~~v~l~C~~------~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 219 (325)
..+.+.+...+ |.+... .....+..|+.+.|.|.+ .+.|. +.+.|++++..+...... . ...
T Consensus 90 ~~~~v~v~~~~-----p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~--~~i~W~k~~~~l~~~~~~-~-~~~ 160 (315)
T 1itb_B 90 IKISAKFVENE-----PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNEL--PKLQWYKDCKPLLLDNIH-F-SGV 160 (315)
T ss_dssp EECCCEEECCC-----TTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCC--CCCEEEETTEECCCCSSS-E-EEE
T ss_pred EEEEEEEeCCC-----CCcccccccccceEEecCCCeEEEEecccccccCCCCC--CEEEEEECCEECCCccce-E-eec
Confidence 55555554431 222111 123467889999999998 67776 899999999988654322 1 112
Q ss_pred cCCcceeEEEEEeCCCCCCCCeEEEEEEE-eCCCcEE---eEEEEEEE--------------------------------
Q psy1095 220 DSKENLVIARLKIPHVYPEDEGEFTCRVA-NELGEVV---TSACLIVD-------------------------------- 263 (325)
Q Consensus 220 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~---~~~~l~v~-------------------------------- 263 (325)
. ..|.|.+++.+|+|.|+|.|. |..|... ..+.+.+.
T Consensus 161 ~-------~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~ 233 (315)
T 1itb_B 161 K-------DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV 233 (315)
T ss_dssp T-------TEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEE
T ss_pred C-------ceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEE
Confidence 2 389999999999999999999 7777652 23333221
Q ss_pred ----------eeCCeecCCCCceE----EEEeC--------CEEEEEEcCCCCCC-CeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 264 ----------VVKGKDLTSDGRLN----IITVG--------GTSVLTIEDITGDD-SGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 264 ----------~~~~~~~~~~~~~~----~~~~~--------~~~~l~i~~v~~~d-~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
..++..+....... ..... ....|.|.++..+| +|.|+|.|.|..|..+.++.|.|+
T Consensus 234 ~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 234 TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred ecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 11111111111000 00000 12379999999999 999999999999999999999987
Q ss_pred c
Q psy1095 321 G 321 (325)
Q Consensus 321 ~ 321 (325)
.
T Consensus 314 ~ 314 (315)
T 1itb_B 314 V 314 (315)
T ss_dssp C
T ss_pred C
Confidence 5
No 72
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=2.7e-27 Score=198.68 Aligned_cols=248 Identities=20% Similarity=0.229 Sum_probs=152.4
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCCeeCC---------CCCcEEEEec-----CCeEEEEEccCC
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDGKPAT---------PNARVTIREK-----EDLRFLEISEVT 129 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~---------~~~~~~~~~~-----~~~~~l~i~~~~ 129 (325)
...|...|....+.+|+++.|.|.+.+. |.+.+.|+|++.+.. ...++..... .....|.|.+++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3456677888899999999999999886 888999999875431 1113332211 334579999999
Q ss_pred CCCCeEEEEEEEeCCee-----EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC
Q psy1095 130 LEDAGLYTIKVENNYGS-----VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN 204 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~ 204 (325)
.+|+|.|+|.+.+..+. ....+.|.|...+. .|.+. . ....+.+|+.+.|.|.+.+.|++...+.|++++
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~---~p~i~-~-~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g 157 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPS---APVVS-G-PAARATPQHTVSFTCESHGFSPRDITLKWFKNG 157 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCC---CCEEE-C-CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCC---Cceee-c-cccccCCCCEEEEEEEEeCccCCCcEEEEEECC
Confidence 99999999999987542 12345777776532 34443 2 235678899999999999988732389999999
Q ss_pred EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE---EeEEEE----------EEE--------
Q psy1095 205 RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV---VTSACL----------IVD-------- 263 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~l----------~v~-------- 263 (325)
..+...... ......+..+...+.|.|.....+|.|.|+|.|.|..+.. .....+ .+.
T Consensus 158 ~~l~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~ 236 (327)
T 2wng_A 158 NELSDFQTN-VDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAEN 236 (327)
T ss_dssp EECCCEEEE-EECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTT
T ss_pred EEccccccc-cccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCC
Confidence 887643211 0000111223344678888877778899999999976642 221111 110
Q ss_pred --------------------eeCCeecCCCCceEEE-EeCCE----EEEEEcCCCCCCCeEEEEEEECCCeeE-EeEEEE
Q psy1095 264 --------------------VVKGKDLTSDGRLNII-TVGGT----SVLTIEDITGDDSGKYQVHVSNQHGSD-SCYASV 317 (325)
Q Consensus 264 --------------------~~~~~~~~~~~~~~~~-~~~~~----~~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l 317 (325)
.+++..+..+...... ..++. ..|.|..+..+|+|.|+|.|.|..|.. +.++.+
T Consensus 237 ~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~ 316 (327)
T 2wng_A 237 QVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDL 316 (327)
T ss_dssp CCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEEC
T ss_pred cEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheEE
Confidence 1111111100000000 11121 358899999999999999999999864 444444
Q ss_pred E
Q psy1095 318 A 318 (325)
Q Consensus 318 ~ 318 (325)
.
T Consensus 317 ~ 317 (327)
T 2wng_A 317 K 317 (327)
T ss_dssp C
T ss_pred E
Confidence 3
No 73
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.95 E-value=1.5e-25 Score=173.03 Aligned_cols=181 Identities=20% Similarity=0.322 Sum_probs=142.7
Q ss_pred CCCeeEecCCceEecC-CCeEEEEEEEEecCC--CeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDL-GDTVRFQCSVTGQPA--PWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~-g~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
.||.|... ....+.+ |+++.|.|.+.+.|. +.+.|++++..+....... ....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 2 NEPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp -CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 46777764 4455666 999999999998876 7899999999887654322 3467999999999999999999
Q ss_pred EeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee--CCEEeccCC-CCceEE
Q psy1095 141 ENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR--NNRLIKLDS-DMKPEV 217 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~--~~~~~~~~~-~~~~~~ 217 (325)
.+. +.....+.|.|..+ |.+...+....+..|+.+.|.|.+.+.|. +.+.|++ ++..+.... ..+...
T Consensus 76 ~n~-~~~~~~~~l~V~~~------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~~g~~~~~~~~~~~~~~ 146 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKAA------PDITGHKRSENKNEGQDAMMYCKSVGYPH--PEWMWRKKENGVFEEISNSSGRFFI 146 (190)
T ss_dssp EET-TEEEEEEEEEEECC------CEEEEECSEEEEETTSCEEEEEEEECSSC--CEEEEEEEETTEEEECCCTTSCEEE
T ss_pred EeC-CcccccEEEEEecC------CcccccCCcceeeCCCcEEEEEEeCccCC--CceEEEEcCCCceeeeecCCCeEEE
Confidence 998 77778888888775 56666666677899999999999999888 8999999 777665322 112222
Q ss_pred EecCCcceeEEEEEeCCCC-CCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 218 QVDSKENLVIARLKIPHVY-PEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
...+ ....|.|.+++ .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 147 ~~~~----~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 147 INKE----NYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECS----SEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ecCC----CeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 2222 23589999999 799999999999999999888888774
No 74
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=201.47 Aligned_cols=236 Identities=16% Similarity=0.190 Sum_probs=162.3
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.|...+....+.+|+++.|.|.+.+. +.|++++.. ............|.|.+++.+|+|.|+|.+.+.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 58899888888899999999999998763 899965432 233334445678999999999999999999887
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC-CEEeccCCCCceEEEecCC
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRN-NRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~ 222 (325)
.+.....+.|.|..++. .+...+....+.+|+.+.|.|.+.+ +...+.+.|+++ +..+........ ...+
T Consensus 74 ~~~~~~~~~l~V~~~~~-----~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~--~~~~- 144 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPAR-----PWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSF--SPWH- 144 (292)
T ss_dssp ---CCEEECCEECCSSC-----CEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEEC--CSSS-
T ss_pred CCCcceEEEEEEcCccc-----cccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccc--cCCc-
Confidence 77667777888876532 2233445677889999999999986 332257999997 444433322211 1222
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe-EEEEEEEee---CCee--------cCCCCce-------------E
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT-SACLIVDVV---KGKD--------LTSDGRL-------------N 277 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~---~~~~--------~~~~~~~-------------~ 277 (325)
.|.|.+++.+|+|.|+|.+.|..+.... .+.|.|... ++.. +..+... .
T Consensus 145 ------~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~ 218 (292)
T 4dkd_C 145 ------GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFD 218 (292)
T ss_dssp ------CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCE
T ss_pred ------eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceE
Confidence 4999999999999999999988775543 666766531 1100 0001100 0
Q ss_pred EE---------------EeC----CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 278 II---------------TVG----GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 278 ~~---------------~~~----~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
+. ... ....|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++.
T Consensus 219 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 219 VFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred EEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 10 011 12479999999999999999999999999999999998764
No 75
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.95 E-value=6.5e-26 Score=175.84 Aligned_cols=177 Identities=20% Similarity=0.328 Sum_probs=144.5
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEE-ecCCCeeEEeeCCeeCCCCC--cEEEEecCC-------eEEEEEccCCCCCCe
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVT-GQPAPWTSWSKDGKPATPNA--RVTIREKED-------LRFLEISEVTLEDAG 134 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~-------~~~l~i~~~~~~d~G 134 (325)
+|.|...|....+.+|+++.|.|.+. +.|.+.+.|++++..+.... ++.+....+ ...|.|.+++..|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 68899999999999999999999998 89999999999999987663 344433332 468999999999999
Q ss_pred EEEEEEEeCCeeEEE-EEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC-eeEEeeCCEEeccCCC
Q psy1095 135 LYTIKVENNYGSVEA-TARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH-DISWFRNNRLIKLDSD 212 (325)
Q Consensus 135 ~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~-~~~W~~~~~~~~~~~~ 212 (325)
.|+|.+.+..+.... .+.|.|... |.+...+....+.+|+.+.|.|.+.+.|. + .+.|++++..+.....
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~~v~W~~~~~~~~~~~~ 153 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL------PYFLEEPEDRTVAANTPFNLSCQAQGPPE--PVDLLWLQDAVPLATAPG 153 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS------CEEEECCCCEEECTTCCEEEEEEEECSSC--CCEEEEEESSCBSSSSTT
T ss_pred EEEEEEEeCCCceecccEEEEEecC------CeEEcCCCcEEEcCCCEEEEEeECCCCCC--CCEEEEEECCEeccCCCC
Confidence 999999998775443 377777654 56666666778889999999999999987 7 9999999988765443
Q ss_pred CceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE-eEEEEEE
Q psy1095 213 MKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV-TSACLIV 262 (325)
Q Consensus 213 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v 262 (325)
. . ....|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 154 ~-----~------~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 154 H-----G------PQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp S-----S------CCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred c-----C------CCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 2 1 23589999987 78999999999999886 6778877
No 76
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.95 E-value=5.3e-28 Score=211.42 Aligned_cols=220 Identities=17% Similarity=0.197 Sum_probs=144.3
Q ss_pred CCCCCcccCCCCCCCccccccccccc--------ccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR--------TRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTS 98 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~--------~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~ 98 (325)
.+|.|.+++++|+|.|.|.+.+.... .+.+. .+|.+...+....+.+|+.+.|.|.+.+. |.| .+.
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 158 (444)
T 1igt_B 79 LYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 158 (444)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEE
Confidence 47899999999999999999775321 12222 24555543333345789999999999884 776 999
Q ss_pred EeeCCeeCCCCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEEC------------CCcccC
Q psy1095 99 WSKDGKPATPNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMD------------PRAIIS 163 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~------------~~~~~~ 163 (325)
|++++..+...........+ ....|.|.++..+| |.|+|.+.|..+.......+.+.. ......
T Consensus 159 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (444)
T 1igt_B 159 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLG 237 (444)
T ss_dssp EGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCC
T ss_pred EecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCC
Confidence 99988763210000000111 12358899999889 999999999887654333333210 001112
Q ss_pred CCeeeecCcCee--EecCCcEEEEEEEEecC--CCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCC
Q psy1095 164 RPKVLNGLENLR--CCDGDSVTFECQVQVVP--PNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPED 239 (325)
Q Consensus 164 ~p~~~~~~~~~~--v~~g~~v~l~C~~~~~~--~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 239 (325)
+|.+...+.... +.+|+.++|.|.+.+.+ ++.+.+.|++++..+......... ...+......+.|.|.+++.+|
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~d 316 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHR-EDYNSTLRVVSALPIQHQDWMS 316 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCE-EECSSSEEEEEEEECCHHHHHT
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccce-eCCCCcEEEEEEEEEcHHHhcc
Confidence 455433332322 47899999999999985 323699999999887644322111 1122223345789999999999
Q ss_pred CeEEEEEEEeCCCcE
Q psy1095 240 EGEFTCRVANELGEV 254 (325)
Q Consensus 240 ~G~Y~C~~~~~~~~~ 254 (325)
+|.|+|.|.|..+..
T Consensus 317 ~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 317 GKEFKCKVNNKDLPA 331 (444)
T ss_dssp TCEEEEEEECTTCSS
T ss_pred CCcEEEEEEcCCCCC
Confidence 999999999987754
No 77
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=1.1e-27 Score=200.14 Aligned_cols=243 Identities=14% Similarity=0.137 Sum_probs=150.4
Q ss_pred ccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 61 RLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 61 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
....+|.|...|. ..+.+|++++|.|.+.+. .+.+.|+|++..+..... .......|.|.+++.+|+|.|+|.+
T Consensus 20 ~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a 93 (316)
T 3vh8_G 20 GGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH----GRIFQESFNMSPVTTAHAGNYTCRG 93 (316)
T ss_dssp ----CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH----HCCBSSCEEECSCCGGGCEEEEEEE
T ss_pred CCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec----CCcceEEEEECCCCcccCeEEEEEE
Confidence 3447889988887 568899999999999876 678999999987643211 1112345999999999999999999
Q ss_pred EeCC-----eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCce
Q psy1095 141 ENNY-----GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKP 215 (325)
Q Consensus 141 ~~~~-----~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 215 (325)
.+.. ......+.|.|.... .+|.+...+.. .+.+|+.++|.|.+. .++ +.+.|++++..+........
T Consensus 94 ~~~~~~~~~~~~s~~~~l~V~~~~---~~p~~~~~~~~-~v~~G~~v~L~C~~~-~~~--~~~~w~k~g~~~~~~~~~~~ 166 (316)
T 3vh8_G 94 SHPHSPTGWSAPSNPVVIMVTGNH---RKPSLLAHPGP-LVKSGERVILQCWSD-IMF--EHFFLHKEGISKDPSRLVGQ 166 (316)
T ss_dssp BCSSSSSSBCCCCCCEEEEEECSS---CCCEEEEESCS-EEETTCCEEEEEEES-SCC--SEEEEEETTCCSCCEEEECE
T ss_pred EcCCCCcceecCCCcEEEEEecCC---CCCeEEecCCC-ccCCCCeEEEEEcCC-CCC--cEEEEEECCCccccceeeee
Confidence 7532 223445667776542 34666655444 388999999999984 344 68999999876642211000
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE-----EeEEEEEEEeeC---------CeecCCCCceE----
Q psy1095 216 EVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV-----VTSACLIVDVVK---------GKDLTSDGRLN---- 277 (325)
Q Consensus 216 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~~---------~~~~~~~~~~~---- 277 (325)
. .. ......|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|.... ...+..+..+.
T Consensus 167 ~-~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~ 241 (316)
T 3vh8_G 167 I-HD----GVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCS 241 (316)
T ss_dssp E-ET----TEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEE
T ss_pred e-cC----CCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEE
Confidence 0 00 1134689999999999999999999987641 333445443211 11111111110
Q ss_pred --------EEEeC-----------------CEEEEEEcCCCCCCCeEEEEEEECCCee-----EEeEEEEEEeccc
Q psy1095 278 --------IITVG-----------------GTSVLTIEDITGDDSGKYQVHVSNQHGS-----DSCYASVAVEGRK 323 (325)
Q Consensus 278 --------~~~~~-----------------~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~p 323 (325)
.+..+ ....|.|.+++ |+|.|+|.|.|..+. .+..+.|.|.++|
T Consensus 242 ~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 242 SRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp ESSCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred CCCCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 01111 12579999999 999999999997763 4566889998887
No 78
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=2e-27 Score=201.22 Aligned_cols=234 Identities=16% Similarity=0.167 Sum_probs=146.1
Q ss_pred CCceEecCCCeEEEEEEEEecC-----------CCeeEEeeCCee------CC-CCCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 72 PHNKICDLGDTVRFQCSVTGQP-----------APWTSWSKDGKP------AT-PNARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~~p-----------~~~v~W~~~~~~------~~-~~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
+..+.+.+|+++.|.|.+.+.| .+.+.|++++.. +. ......+...+ ..|.|.+++.+|+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~D~ 91 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK--DVLWFRPTLLNDT 91 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEET--TEEEESSCCGGGC
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecC--CEEEEccCChhhC
Confidence 4566789999999999998755 489999998742 21 00111121222 2699999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-----EecCCCCCeeEEeeCCEEec
Q psy1095 134 GLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-----QVVPPNDHDISWFRNNRLIK 208 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-----~~~~~~~~~~~W~~~~~~~~ 208 (325)
|.|+|.+.|..+.....+.|.|...+.... + ....+....+.+|+.+.|.|.+ .+.|. +.+.|++++..+.
T Consensus 92 G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~-~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~--~~v~W~k~~~~l~ 167 (349)
T 4dep_C 92 GNYTCMLRNTTYCSKVAFPLEVVQKDSCFN-S-PMKLPVHKLYIEYGIQRITCPNVDGYFPSSVK--PTITWYMGCYKIQ 167 (349)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTSC-C-SCCCCEEEEETTCSEEEEECCSCTTSSCTTSC--CEEEEEETTEECC
T ss_pred EEEEEEEecCCceEEEEEEEEEecCCcccC-c-ccccCcceeeecCccEEEEcCCCcccccCCCC--ceEEEeeCCEECC
Confidence 999999999888888888888887543211 1 1122234467789999999975 55666 8999999999875
Q ss_pred cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC-CcE---EeEEEEEEEee-----CCeec---------
Q psy1095 209 LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL-GEV---VTSACLIVDVV-----KGKDL--------- 270 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~---~~~~~l~v~~~-----~~~~~--------- 270 (325)
... ... ..+ ..|.|.+++.+|+|.|+|.|.|.. +.. ...+.|.|... ++..+
T Consensus 168 ~~~--~~~--~~~------~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~ 237 (349)
T 4dep_C 168 NFN--NVI--PEG------MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYE 237 (349)
T ss_dssp SCS--SEE--EET------TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC---------
T ss_pred Ccc--cee--ecC------CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEE
Confidence 432 211 222 479999999999999999999986 443 44555555332 11110
Q ss_pred -C-----------C-----CCceEE-EEe-----------------------CC---EEEEEEcCCCCCCC-eEEEEEEE
Q psy1095 271 -T-----------S-----DGRLNI-ITV-----------------------GG---TSVLTIEDITGDDS-GKYQVHVS 305 (325)
Q Consensus 271 -~-----------~-----~~~~~~-~~~-----------------------~~---~~~l~i~~v~~~d~-G~Y~C~a~ 305 (325)
. . .....+ +.. ++ ...|.|.++..+|+ |.|+|.|.
T Consensus 238 v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 317 (349)
T 4dep_C 238 KEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHAR 317 (349)
T ss_dssp -------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEE
T ss_pred EecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEE
Confidence 0 0 000111 111 11 22399999999999 99999999
Q ss_pred CCCeeEEeEEEEEEec
Q psy1095 306 NQHGSDSCYASVAVEG 321 (325)
Q Consensus 306 n~~g~~~~~~~l~V~~ 321 (325)
|..|.....+.|.|+.
T Consensus 318 N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 318 SAKGEVAKAAKVKQKV 333 (349)
T ss_dssp CSSCEEEEECC-----
T ss_pred cCCCcEEEEEEEeeec
Confidence 9999999999999986
No 79
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.95 E-value=6.3e-26 Score=175.26 Aligned_cols=183 Identities=22% Similarity=0.341 Sum_probs=145.1
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecC-CCeeEEee-CCeeCC-CCCcEEEEe-cCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQP-APWTSWSK-DGKPAT-PNARVTIRE-KEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~~-~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
|+.+...|.+..+.+|+++.|.|.+.+.+ .+.+.|++ ++..+. ...++.+.. ......|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 56788889999999999999999998876 78999999 887776 334555433 245678999999999999999999
Q ss_pred EeCC-eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEe
Q psy1095 141 ENNY-GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQV 219 (325)
Q Consensus 141 ~~~~-~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 219 (325)
.+.. +.....+.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+............
T Consensus 82 ~~~~~~~~~~~~~l~v~~~------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~~~~~~~ 153 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQK------LMFKNAPTPQEFKEGEDAVIVCDVVSSLP--PTIIWKHKGRDVILKKDVRFIVLS 153 (191)
T ss_dssp EETTTEEEEEEEEEEEECC------SEEEECCSSEECCTTSCEEECCEEECSSC--CEEEEEETTEEGGGGCCTTEEECT
T ss_pred EcCCCcceEEEEEEEeecC------ceEecCCCcEeecCCCeEEEEEEECCCCC--CEEEEEECCEEeeccCCceEEEec
Confidence 9987 55667777777654 56666666777889999999999999888 889999999988755443333222
Q ss_pred cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 220 DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 220 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.+ .|.|.+++.+|+|.|+|.|.|..+.......+.|
T Consensus 154 ~~-------~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 154 NN-------YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TS-------CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CC-------eEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 22 7999999999999999999998876655555544
No 80
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=5.1e-28 Score=204.87 Aligned_cols=247 Identities=14% Similarity=0.147 Sum_probs=143.6
Q ss_pred eeeecccCCCCcc---------cCCCCCCCCCCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeE----ecC
Q psy1095 11 LSVKLTRPSGLMS---------GHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFY----AVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~---------~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~----~~~ 72 (325)
..+.|.+++.... ..........+|.|.+++.+|+|.|+|.+.+..... +.+..+|.+. ..|
T Consensus 48 ~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~ 127 (349)
T 4dep_C 48 LTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLP 127 (349)
T ss_dssp CEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCC
T ss_pred ceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccC
Confidence 5677887774211 111112234578999999999999999998764422 2222333221 223
Q ss_pred CceEecCCCeEEEEEEE-----EecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC-ee
Q psy1095 73 HNKICDLGDTVRFQCSV-----TGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY-GS 146 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~-----~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~ 146 (325)
....+.+|+.+.|.|.+ .+.|.+.+.|++++..+....++... + ..|.|.+++.+|+|.|+|.+.|.. +.
T Consensus 128 ~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~--~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~ 203 (349)
T 4dep_C 128 VHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPE--G--MNLSFLIALISNNGNYTCVVTYPENGR 203 (349)
T ss_dssp EEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEE--T--TEEEEESCCGGGCEEEEEEEEEEETTE
T ss_pred cceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeec--C--CEEEEeeeeecCCcEEEEEEEEeeCCE
Confidence 45578899999999985 67889999999999988654443322 2 369999999999999999999865 43
Q ss_pred E---EEEEEEEEECCCcccCCCeeeecCcCe--eEecCCcEEEEEEEEec----CCCCCeeEEeeCCEEecc-CCCCceE
Q psy1095 147 V---EATARLEIMDPRAIISRPKVLNGLENL--RCCDGDSVTFECQVQVV----PPNDHDISWFRNNRLIKL-DSDMKPE 216 (325)
Q Consensus 147 ~---~~~~~l~v~~~~~~~~~p~~~~~~~~~--~v~~g~~v~l~C~~~~~----~~~~~~~~W~~~~~~~~~-~~~~~~~ 216 (325)
. ...+.|.|...+....+|.+....... .+..|+.+.|.|.+.+. |. +.+.|++++..+.. .......
T Consensus 204 ~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~--p~v~W~~~g~~l~~~~~~~~~~ 281 (349)
T 4dep_C 204 TFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSR--NEVWWTIDGKKPDDITIDVTIN 281 (349)
T ss_dssp EEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCC--CEEEEESSCC--------CCCC
T ss_pred EEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCC--CEEEEEECCEEccccCCccccc
Confidence 3 566777777653322346655444332 67889999999999954 55 89999999988765 2222211
Q ss_pred EEe---cCCcceeEEEEEeCCCCCCCC-eEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 217 VQV---DSKENLVIARLKIPHVYPEDE-GEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 217 ~~~---~~~~~~~~~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
... ..........|.|.+++.+|+ |.|+|.|.|..|.....+.|.|.
T Consensus 282 ~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 282 ESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp EEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC----
T ss_pred cceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 000 001122346699999999999 99999999999999988888874
No 81
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.95 E-value=2.4e-26 Score=177.71 Aligned_cols=184 Identities=25% Similarity=0.437 Sum_probs=146.0
Q ss_pred cCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC-CCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 62 LTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP-NARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 62 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
+..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ ..|.|.+++..|+|.|+|.+
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEE
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEE
Confidence 34577888888888899999999999999999999999999998865 3455554333 36999999999999999999
Q ss_pred EeCCee-EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEe
Q psy1095 141 ENNYGS-VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQV 219 (325)
Q Consensus 141 ~~~~~~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 219 (325)
.+..+. ......|.|... |.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+........ ..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~~~--~~ 151 (192)
T 2iep_A 82 NNGVGGAVESCGALQVKMK------PKITRPPINVKIIEGLKAVLPCTTMGNPK--PSVSWIKGDSALRENSRIAV--LE 151 (192)
T ss_dssp ECSSSCCEEEEEEEEEEEE------EEEEECCCCEEEETTSCEEECCEEEEESC--CEEEEEETTEECCCCSSEEE--CT
T ss_pred EcCCCceeEeEEEEEEEeC------CccccCCcceEEeCCCcEEEEEEEeccCC--ceEEEEeCCEEccCCCcEEE--ec
Confidence 987765 445566777654 45555555677889999999999999988 79999999998875543221 12
Q ss_pred cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE-eEEEEEEEe
Q psy1095 220 DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV-TSACLIVDV 264 (325)
Q Consensus 220 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~ 264 (325)
. ..|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..
T Consensus 152 ~-------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 152 S-------GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp T-------SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred C-------CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 2 2799999999999999999999998774 457777744
No 82
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.95 E-value=1.9e-26 Score=180.13 Aligned_cols=184 Identities=15% Similarity=0.207 Sum_probs=137.6
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEe-cCCCeeEEeeCCeeCCCCCcEEEEecC--CeEEEEEccCCCCCCeEEEEEEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTG-QPAPWTSWSKDGKPATPNARVTIREKE--DLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
+|.|... ....+.+|+.+.|.|.+.+ .|.|.++|++++.++..+.++.+..+. +...|.|.+++.+|+|.|+|.+.
T Consensus 3 ~p~~~~~-~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEE-EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecC-CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 3555443 3567899999999999864 799999999999999887777766544 55689999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCc---------------ccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCCeeEEeeCCE
Q psy1095 142 NNYGSVEATARLEIMDPRA---------------IISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDHDISWFRNNR 205 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~---------------~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~~~~W~~~~~ 205 (325)
|.. ......+.+..... ...+|.+.... ...+.+|+.+.|.|.+.+. |. +.+.|+|++.
T Consensus 82 Ng~--a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~--p~i~W~k~g~ 156 (207)
T 3rbs_A 82 DGK--ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKE--THIVWYKDER 156 (207)
T ss_dssp ETT--EEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTT--CEEEEEETTE
T ss_pred CCC--eEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCC--CEEEEEECCE
Confidence 943 33333332211000 00246665544 4678899999999999998 77 8999999999
Q ss_pred EeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 206 LIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.+..+.+.. ... ....|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 157 ~l~~~~~~~----~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 157 EISVDEKHD----FKD----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EECCCCCCC----CSS----EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ECCCCCceE----cCC----CEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 987654321 111 3467999999999999999999999999988887754
No 83
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.95 E-value=5.3e-27 Score=189.74 Aligned_cols=212 Identities=14% Similarity=0.157 Sum_probs=130.6
Q ss_pred cCCCCCCCcccccccccccc--cccCCCCeeEecCCceEecCCCeEEEEEEEEecC-----CCeeEEeeCC--eeC----
Q psy1095 40 ISPLSSRTFTPYSLNSAIRT--RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQP-----APWTSWSKDG--KPA---- 106 (325)
Q Consensus 40 v~~~d~G~Y~c~~~~~~~~~--~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~~~~--~~~---- 106 (325)
++++|+|.|+|.+....... ..+..++.+...|....+.+|++++|.|.+.+.| .+.+.|+|++ ..+
T Consensus 11 v~~~dsg~Y~C~a~g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~ 90 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLI 90 (254)
T ss_dssp ---------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEE
T ss_pred ecCCccEEEEEcCchhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEE
Confidence 89999999999997322211 1122467777888889999999999999998877 4899999743 211
Q ss_pred --------CCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEe
Q psy1095 107 --------TPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCC 177 (325)
Q Consensus 107 --------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~ 177 (325)
....++.+...+...+|.|.+++.+|+|.|+|.+.+..+.. .....+.|... ..+|.+..........
T Consensus 91 ~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~ 167 (254)
T 2c1o_A 91 YLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRA---DAAPTVSIFPPSSEQL 167 (254)
T ss_dssp ETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCC---CBCCEEEEECCCHHHH
T ss_pred EeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCC---CCCCeeEeecCChhhc
Confidence 11246666655666789999999999999999998875432 22235566432 1246665544433344
Q ss_pred cCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec-CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 178 DGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD-SKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 178 ~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
.|+.++|.|.+.+.+++.+.+.|++++..+............. +..+...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 168 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 168 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 6889999999998655335799999998876541000000011 1122345789999999999999999999987653
No 84
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=3.5e-28 Score=202.30 Aligned_cols=214 Identities=15% Similarity=0.171 Sum_probs=152.6
Q ss_pred CCCCCCcccCCCCCCCcccccccccccc------cccCCCCe--eEecCCceEecCCCeEEEEEEE-EecCCCeeEEeeC
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRT------RRLTSSPR--FYAVPHNKICDLGDTVRFQCSV-TGQPAPWTSWSKD 102 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~------~~~~~~p~--~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~~~ 102 (325)
..+|.|.+++++|+|.|+|.+.+..... ..+..+|. +...+.......|+.+.|.|.+ .+.|.+.++|+++
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~ 152 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGD 152 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCC
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEEC
Confidence 3578999999999999999986642211 22223333 3344555566778999999986 6789999999999
Q ss_pred CeeCCCCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeE--EEEEEEEEECCCcccCCCeeeecC-cCeeE
Q psy1095 103 GKPATPNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSV--EATARLEIMDPRAIISRPKVLNGL-ENLRC 176 (325)
Q Consensus 103 ~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~-~~~~v 176 (325)
+..+...... .... ....|.|..+..+|.|.|+|.+.|..+.. ...+.|.|..+ |.+.... ....+
T Consensus 153 ~~~~~~~~~~--~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~------P~~~~~~~~~~~~ 224 (308)
T 4fom_A 153 LGEMESTTTS--FPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYA------PEVSVTGYDGNWF 224 (308)
T ss_dssp SSBCCEEEEE--CTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEE------EEECCBCCCSCEE
T ss_pred Ccccccccce--eeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecC------CeeEEcccceeee
Confidence 8876532110 0011 12358999999999999999999976543 34445555443 3433332 33456
Q ss_pred ecCCcEEEEEEEEecCCCCC-eeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 177 CDGDSVTFECQVQVVPPNDH-DISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 177 ~~g~~v~l~C~~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
..|+.+.|.|.+.|.|+ + .+.|++++..+...... .++ ..|.|.+++.+|+|.|+|.|.|..|...
T Consensus 225 ~~g~~v~l~C~~~g~P~--p~~v~W~k~~~~~~~~~~~-----~~~------~~l~i~~v~~~d~G~Y~C~A~N~~G~~~ 291 (308)
T 4fom_A 225 VGRKGVNLKCNADANPP--PFKSVWSRLDGQWPDGLLA-----SDN------TLHFVHPLTFNYSGVYICKVTNSLGQRS 291 (308)
T ss_dssp TTCCSCEEECCEEEESC--EEEEECCBSSSCCCSSCBC-----STT------EEECCSCCCSCCCSEEEEEEEETTEEEE
T ss_pred eccccEEEEEEEecCCC--CcEEEEEECCeECCCcEEE-----cCC------eEEEECCCChhhCEEEEEEEEeCCCcEE
Confidence 67899999999999987 5 69999998776543211 122 4677899999999999999999999999
Q ss_pred eEEEEEEEeeC
Q psy1095 256 TSACLIVDVVK 266 (325)
Q Consensus 256 ~~~~l~v~~~~ 266 (325)
..+.|.|...|
T Consensus 292 ~~~~l~V~~~P 302 (308)
T 4fom_A 292 DQKVIYISDPP 302 (308)
T ss_dssp EEEECCEECCC
T ss_pred EEEEEEEEcCC
Confidence 88888885443
No 85
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.95 E-value=5.3e-27 Score=190.46 Aligned_cols=210 Identities=14% Similarity=0.148 Sum_probs=157.4
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCccccccccccc---ccccCCCCeeEecCCceEecCCCeEEEEEE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIR---TRRLTSSPRFYAVPHNKICDLGDTVRFQCS 88 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~---~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~ 88 (325)
.++|.+++..+.. ....|.|.+++.+|+|.|+|.+.+.... ...+..++ +...+....+.+|+.+.|.|.
T Consensus 33 ~~~W~~~g~~~~~------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~-~~~~~~~~~~~~g~~v~l~C~ 105 (262)
T 3rjd_A 33 STQWFLNGTATQT------STPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGW-LLLQVSSRVFTEGEPLALRCH 105 (262)
T ss_dssp CEEEEETTEECSC------CSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSS-EEEEESCSEEETTSCEEEEEE
T ss_pred eEEEEECCEEeec------cCCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccc-eEecCCCeEEecCCeEEEEEE
Confidence 5667666555432 3567899999999999999999765432 22333444 344555667889999999999
Q ss_pred E-EecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCee
Q psy1095 89 V-TGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKV 167 (325)
Q Consensus 89 ~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~ 167 (325)
+ .+.|.+.+.|++++..+... . ....|.|.+++.+|+|.|+|.+.+..+.....+.|.|.... .+|.+
T Consensus 106 ~~~~~p~~~v~W~~~g~~~~~~------~--~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~---~~p~~ 174 (262)
T 3rjd_A 106 AWKDKLVYNVLYYRNGKAFKFF------H--WNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF---PAPVL 174 (262)
T ss_dssp EGGGCCCEEEEEEETTEEEEEE------E--ECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSS---CCCEE
T ss_pred ccCCCCCceEEEEECCcccccc------C--CCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCC---CCCeE
Confidence 9 66788899999998876321 1 12359999999999999999999988877777888887641 23555
Q ss_pred eecCcCeeEecCCcEEEEEEEEecCC-C--CCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEE
Q psy1095 168 LNGLENLRCCDGDSVTFECQVQVVPP-N--DHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFT 244 (325)
Q Consensus 168 ~~~~~~~~v~~g~~v~l~C~~~~~~~-~--~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 244 (325)
...+ ...+.+|+.+.|.|.+.+.|. + ...+.|++++..+.... ....|.|.+++.+|+|.|+
T Consensus 175 ~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~--------------~~~~L~i~~v~~~d~G~Y~ 239 (262)
T 3rjd_A 175 NASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN--------------TSSEYQILTARREDSGLYW 239 (262)
T ss_dssp EESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEE--------------SCCEEEESSCCGGGCEEEE
T ss_pred eecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccC--------------CCceEEEEEechhhCeEEE
Confidence 5444 556889999999999998774 2 12478999998775221 1247999999999999999
Q ss_pred EEEEeCCCcE
Q psy1095 245 CRVANELGEV 254 (325)
Q Consensus 245 C~~~~~~~~~ 254 (325)
|.|.|..|..
T Consensus 240 C~a~n~~G~~ 249 (262)
T 3rjd_A 240 CEAATEDGNV 249 (262)
T ss_dssp EEEEETTSSC
T ss_pred EEEEcccCce
Confidence 9999999864
No 86
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.95 E-value=7.1e-25 Score=169.41 Aligned_cols=184 Identities=24% Similarity=0.420 Sum_probs=143.6
Q ss_pred CCCeeEecCC--ceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPH--NKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~--~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.||.+...+. ...+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+... ...|.|.+++..|+|.|+|.+.
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEE
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCC--eeEEEEecCChhcCcEEEEEEE
Confidence 4788876655 46788999999999999999999999999999987777665433 3479999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC--CEEeccCC---CCceE
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRN--NRLIKLDS---DMKPE 216 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~--~~~~~~~~---~~~~~ 216 (325)
+..+.....+.|.|... |.+... ....+..|+.+.|.|.+.+.|. +.+.|+++ +..+.... .....
T Consensus 79 ~~~~~~~~~~~l~V~~~------p~~~~~-~~~~~~~g~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~ 149 (192)
T 2va4_A 79 NKAGEDEKQAFLQVFVQ------PHIIQL-KNETTYENGQVTLVCDAEGEPI--PEITWKRAVDGFTFTEGDKSLDGRIE 149 (192)
T ss_dssp ETTEEEEEEEEEEEEEE------EEEEEE-CCEEECTTSEEEEEEEEEEESC--CEEEEEETTTTEEECTTCBCTTSCEE
T ss_pred ccccccceEEEEEEEcc------Cccccc-CcceEEeCCeEEEEEEecCCCC--CcEEEEeCCCCceeeccccccCCcEE
Confidence 99888777788888664 333322 2446678999999999999988 89999998 55554321 11111
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 217 VQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 217 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
..... ....|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 150 ~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 150 VKGQH----GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEET----TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred Eeecc----CceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 11111 2468999999999999999999999999888888776
No 87
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=7.1e-27 Score=198.94 Aligned_cols=214 Identities=15% Similarity=0.187 Sum_probs=151.1
Q ss_pred eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCC--------------CCCcEEEEe---cCCeEEEEEccCCCCCCeEEE
Q psy1095 75 KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPAT--------------PNARVTIRE---KEDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 75 ~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~--------------~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~ 137 (325)
+.+.+|+++.|.|.+.+.|.+.+.|+|++..+. ...++.+.. ..+...|.|.+++.+|+|.|+
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 83 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEE
Confidence 468899999999999888999999999975311 112333221 223456999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 138 IKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
|.+.+..+ .+.|.|... ... ....+.+|+.+.|.|.+.+.|. +.+.|++++..+..
T Consensus 84 C~~~n~~~----~~~l~V~~~---------~~~-~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~-------- 139 (363)
T 1wio_A 84 CEVEDQKE----EVQLLVFGL---------TAN-SDTHLLQGQSLTLTLESPPGSS--PSVQCRSPRGKNIQ-------- 139 (363)
T ss_dssp EEETTEEE----EEEEEEEEE---------EES-SCSSEESBSCEEEEEECCTTCC--CCEEEECSSSCEEE--------
T ss_pred EEEEECCC----cEEEEEEeC---------CCC-CceEEecCCCEEEEEEcCCCCC--CeEEEEcCCCcccc--------
Confidence 99976532 455555431 111 1235789999999999988776 89999998754321
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeC-------------------------------
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVK------------------------------- 266 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~------------------------------- 266 (325)
.. ..|.|.+++.+|+|.|+|.|.|..+.....+.|.|...+
T Consensus 140 -~~-------~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p 211 (363)
T 1wio_A 140 -GG-------KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSG 211 (363)
T ss_dssp -ES-------SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEE
T ss_pred -cc-------eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEEEEEEEecccccCCCce
Confidence 12 489999999999999999999876665554455443221
Q ss_pred -------CeecCC--------CCceEEEE----------eCCEEEEEEcCCCCCCCeEEEEEEECC--CeeEEeEEEEEE
Q psy1095 267 -------GKDLTS--------DGRLNIIT----------VGGTSVLTIEDITGDDSGKYQVHVSNQ--HGSDSCYASVAV 319 (325)
Q Consensus 267 -------~~~~~~--------~~~~~~~~----------~~~~~~l~i~~v~~~d~G~Y~C~a~n~--~g~~~~~~~l~V 319 (325)
+..+.. +++..+.. .++...|.|.++..+|+|.|+|.|.|. .|..+..+.|.|
T Consensus 212 ~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V 291 (363)
T 1wio_A 212 ELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVV 291 (363)
T ss_dssp EEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEE
T ss_pred eEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEE
Confidence 111111 11111111 112348999999999999999999999 999888888888
Q ss_pred e
Q psy1095 320 E 320 (325)
Q Consensus 320 ~ 320 (325)
.
T Consensus 292 ~ 292 (363)
T 1wio_A 292 M 292 (363)
T ss_dssp E
T ss_pred E
Confidence 6
No 88
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=195.03 Aligned_cols=216 Identities=15% Similarity=0.165 Sum_probs=139.0
Q ss_pred CCCCCCCcccCCCCCCCccccccccccc----------ccccCC---CCeeEecCCceEecCCCeEEEEEEEEecCCC--
Q psy1095 31 TPRSTPPRSISPLSSRTFTPYSLNSAIR----------TRRLTS---SPRFYAVPHNKICDLGDTVRFQCSVTGQPAP-- 95 (325)
Q Consensus 31 ~~~~l~i~~v~~~d~G~Y~c~~~~~~~~----------~~~~~~---~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-- 95 (325)
...+|.|.+++++|+|.|+|.+.+.... ...+.. +|.+. .| ...+.+|+.+.|.|.+.+.|.+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~ 149 (327)
T 2wng_A 72 MDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDI 149 (327)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCC
T ss_pred ceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCc
Confidence 3457899999999999999999876432 122222 23332 33 3568899999999999987765
Q ss_pred eeEEeeCCeeCCCCCcEEEEe-cCC----eEEEEEccCCCCCCeEEEEEEEeCCee---EEEEEEEEEECCCcccCCCee
Q psy1095 96 WTSWSKDGKPATPNARVTIRE-KED----LRFLEISEVTLEDAGLYTIKVENNYGS---VEATARLEIMDPRAIISRPKV 167 (325)
Q Consensus 96 ~v~W~~~~~~~~~~~~~~~~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~p~~ 167 (325)
.+.|++++..+.......... .++ ...|.|.....+|.|.|+|.+.|..+. ......+.+.. ..+|.+
T Consensus 150 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v----~~~P~i 225 (327)
T 2wng_A 150 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETI----RVPPTL 225 (327)
T ss_dssp EEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTB----CBCCEE
T ss_pred EEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEecccc----CCCCEE
Confidence 899999999886543221111 111 124777777777789999999987654 22333332111 234555
Q ss_pred eecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEE
Q psy1095 168 LNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRV 247 (325)
Q Consensus 168 ~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 247 (325)
...+.. +.+|+.+.|.|.+.+.+++...+.|+++|..+......... ......+...+.|.|..+..+|+|.|+|.|
T Consensus 226 ~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~-~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a 302 (327)
T 2wng_A 226 EVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVT-ENKDGTYNWMSWLLVNVSAHRDDVKLTCQV 302 (327)
T ss_dssp EEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCE-ECTTSCEEEEEEEEC-------CCEEEEEE
T ss_pred EEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceE-ECCCCcEEEEEEEEEccccccCCCEEEEEE
Confidence 544333 67899999999999965532389999999988643222222 111222334467999999999999999999
Q ss_pred EeCCCcEE
Q psy1095 248 ANELGEVV 255 (325)
Q Consensus 248 ~~~~~~~~ 255 (325)
.|..+...
T Consensus 303 ~N~~~~~~ 310 (327)
T 2wng_A 303 EHDGQPAV 310 (327)
T ss_dssp EETTCCCE
T ss_pred EeCCCCCc
Confidence 99987643
No 89
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.94 E-value=1.4e-26 Score=194.53 Aligned_cols=214 Identities=13% Similarity=0.176 Sum_probs=155.6
Q ss_pred CCCCCCCcccCCCCCCCcccccccc-cc-----cccccCCCCeeE--ecCCceEecCC---CeEEEEEE-EEecCCCeeE
Q psy1095 31 TPRSTPPRSISPLSSRTFTPYSLNS-AI-----RTRRLTSSPRFY--AVPHNKICDLG---DTVRFQCS-VTGQPAPWTS 98 (325)
Q Consensus 31 ~~~~l~i~~v~~~d~G~Y~c~~~~~-~~-----~~~~~~~~p~~~--~~~~~~~v~~g---~~v~l~C~-~~~~p~~~v~ 98 (325)
...+|.|.+++.+|+|.|+|.+... .+ ....+..+|.+. ..+....+.+| +.+.|.|. ..+.|.+.+.
T Consensus 90 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~ 169 (331)
T 3u83_A 90 TDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVS 169 (331)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEE
T ss_pred CCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEE
Confidence 3567999999999999999984322 21 123344566653 34556678888 78999998 7889999999
Q ss_pred EeeCCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeee-cCcC
Q psy1095 99 WSKDGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLN-GLEN 173 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~-~~~~ 173 (325)
|++++..... .......++ ...|.|.++..+|+|.|+|.+.|..+.....+.|.|..+ |.+.. ....
T Consensus 170 W~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~------P~~~~~~~~~ 241 (331)
T 3u83_A 170 WETRLKGEAE--YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE------PEVTIEGFDG 241 (331)
T ss_dssp EEESSCCEEE--EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE------EEEEEECCCS
T ss_pred EEcCCCCccc--cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC------CeEEEecCCC
Confidence 9995322110 000111111 135889999999999999999999888888888888765 33332 2234
Q ss_pred eeEecCCcEEEEEEEEecCCCCCe-eEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeC-CCCCCCCeEEEEEEEeCC
Q psy1095 174 LRCCDGDSVTFECQVQVVPPNDHD-ISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIP-HVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 174 ~~v~~g~~v~l~C~~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~~~~~~ 251 (325)
..+..|+.+.|.|.+.+.|. +. +.|++++..+..... ... ..|.|. +++.+|+|.|+|.|.|..
T Consensus 242 ~~~~~g~~~~l~C~~~g~p~--p~~i~W~~~~~~~~~~~~-----~~~-------~~L~i~~~v~~~d~G~Y~C~a~N~~ 307 (331)
T 3u83_A 242 NWYLQRMDVKLTCKADANPP--ATEYHWTTLNGSLPKGVE-----AQN-------RTLFFKGPINYSLAGTYICEATNPI 307 (331)
T ss_dssp CCBTTCCCEEEEEEEEEESC--CCEEEEEETTBSCCTTEE-----EET-------TEEEECSCCCGGGCEEEEEEEEETT
T ss_pred ceEeCCCeEEEEEeCcCCCC--CCEEEEEECCCcccccce-----ecC-------cEEEEeCCCccccCeEEEEEEEecc
Confidence 45778999999999999988 66 999999887754311 122 379999 999999999999999999
Q ss_pred CcEEeEEEEEEEeeC
Q psy1095 252 GEVVTSACLIVDVVK 266 (325)
Q Consensus 252 ~~~~~~~~l~v~~~~ 266 (325)
|.....+.|.|...+
T Consensus 308 G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 308 GTRSGQVEVNITEAA 322 (331)
T ss_dssp EEEEEEEEECCBC--
T ss_pred ccceEEEEEEEeccc
Confidence 999888888874443
No 90
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=2.2e-26 Score=200.76 Aligned_cols=183 Identities=14% Similarity=0.175 Sum_probs=127.5
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCC----CeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPA----PWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEV 128 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~----~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~ 128 (325)
.+...|....+.+|++++|.|.+.+.+. +.+.|+|++ ..+ ....++.....+...+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPV 82 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSC
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCC
Confidence 3566688888999999999999987775 489999963 221 1134666655566778999999
Q ss_pred CCCCCeEEEEEEEeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC-eeEEeeCCEE
Q psy1095 129 TLEDAGLYTIKVENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH-DISWFRNNRL 206 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~-~~~W~~~~~~ 206 (325)
+.+|+|.|+|.+.+..+.. .....|.|... ..+|.+...........|+.+.|.|.+.+.++. + .+.|++++..
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~-~~~v~W~k~g~~ 158 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK-DINVKWKIDGSE 158 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS-CEEEEEEETTEE
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCC---CCCCEEEecCCChhhccCCceEEEEEEccccCC-CcEEEEEECCEE
Confidence 9999999999998876532 23455666432 124665554433334468899999999884432 5 8999999988
Q ss_pred eccCCCCceEEEe-cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 207 IKLDSDMKPEVQV-DSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
+............ .+..+...+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 206 (438)
T 1qgc_4 159 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 206 (438)
T ss_dssp ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred cCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccC
Confidence 7654111000001 1112223568999999999999999999998776
No 91
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.94 E-value=1.8e-25 Score=181.91 Aligned_cols=216 Identities=19% Similarity=0.231 Sum_probs=150.7
Q ss_pred eEecCCCeEEEEEEEEe-cCCC--eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccC---CCCCCe--EEEEEEEeCCee
Q psy1095 75 KICDLGDTVRFQCSVTG-QPAP--WTSWSKDGKPATPNARVTIREKEDLRFLEISEV---TLEDAG--LYTIKVENNYGS 146 (325)
Q Consensus 75 ~~v~~g~~v~l~C~~~~-~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~G--~Y~C~~~~~~~~ 146 (325)
..+.+|++++|.|.+.+ .|.+ .++|++++..+.. .+...++ .+.+..+ +..|+| .|+|.+.|..+.
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCC
Confidence 36889999999999998 7776 9999999998865 2222232 3444444 777877 499999999888
Q ss_pred EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCccee
Q psy1095 147 VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLV 226 (325)
Q Consensus 147 ~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (325)
....+.|.|...+ +|.+.. ....+.+|+.+.|.|.+. |. +.+.| +|..+.... .
T Consensus 87 ~~~~~~l~V~~~p----~p~~~~--~~~~v~~G~~v~l~C~~~--p~--~~i~W--~g~~~~~~~--------------~ 140 (265)
T 2oz4_A 87 QETLQTVTIYSFP----APNVIL--TKPEVSEGTEVTVKCEAH--PR--AKVTL--NGVPAQPLG--------------P 140 (265)
T ss_dssp EEEEEEEEEECCC----CCEEEE--SCSEEETTCEEEEEEECC--TT--SEEEE--SSCSSSCCS--------------S
T ss_pred cEEEEEEEEeCCC----Cceeec--CCceecCCCcEEEEEEcc--CC--CEEEE--CCEEccCCC--------------C
Confidence 8888889987652 244442 355688899999999997 55 89999 666653211 1
Q ss_pred EEEEEeCCCCCCCCeEEEEEEEeCC-CcEE---eEEEEEEEeeCCeecC---------CCCce-------------EEEE
Q psy1095 227 IARLKIPHVYPEDEGEFTCRVANEL-GEVV---TSACLIVDVVKGKDLT---------SDGRL-------------NIIT 280 (325)
Q Consensus 227 ~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~---~~~~l~v~~~~~~~~~---------~~~~~-------------~~~~ 280 (325)
...|.|..+..+|.|.|+|.|.|.. |... ..+.|.|...+...+. .+..+ ..+.
T Consensus 141 ~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~ 220 (265)
T 2oz4_A 141 RAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCL 220 (265)
T ss_dssp EECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEE
T ss_pred cEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEE
Confidence 2568899999999999999998644 6554 5566776543322111 00000 1122
Q ss_pred eCCEEE---EEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 281 VGGTSV---LTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 281 ~~~~~~---l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
.++... ..+..++.+|+|.|+|.|.|..|..+..+.|.|.++
T Consensus 221 ~~~~~~~~~g~~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 221 KDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp ETTTEECCTTSCEECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ECCcccCCCCcEEEeehhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 222100 112347889999999999999999999999999763
No 92
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.94 E-value=1.7e-27 Score=208.97 Aligned_cols=219 Identities=14% Similarity=0.208 Sum_probs=135.8
Q ss_pred CCCCCcccCCCCCCCcccccccccc---------------c--ccccC----CCCeeEecCCceEecCCCeEEEEEEEEe
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI---------------R--TRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTG 91 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~---------------~--~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~ 91 (325)
.+|.|.+++++|+|.|+|.+.+..+ . ...+. .+|.+...+....+.+|+.+.|.|.+.+
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g 158 (457)
T 1hzh_H 79 AYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 158 (457)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEES
T ss_pred EEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeE
Confidence 3689999999999999999987642 0 12222 2566655554445789999999999988
Q ss_pred c-CC-CeeEEeeCCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCC------
Q psy1095 92 Q-PA-PWTSWSKDGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPR------ 159 (325)
Q Consensus 92 ~-p~-~~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~------ 159 (325)
. |. +.+.|++++..+...........++ ...|.|.++..+| |.|+|.+.|..+.......+.+...+
T Consensus 159 ~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~ 237 (457)
T 1hzh_H 159 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCP 237 (457)
T ss_dssp BBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCC
T ss_pred EeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccC
Confidence 6 64 7999999986543111111111112 1368999999999 99999999977654444333332211
Q ss_pred -----cccCCCee-eecCcCee-EecCCcEEEEEEEEecCCC--CCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEE
Q psy1095 160 -----AIISRPKV-LNGLENLR-CCDGDSVTFECQVQVVPPN--DHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARL 230 (325)
Q Consensus 160 -----~~~~~p~~-~~~~~~~~-v~~g~~v~l~C~~~~~~~~--~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (325)
....+|.+ ...+.... +.+|+.+.|.|.+.+.+++ .+.+.|++++..+...... ......+......+.|
T Consensus 238 ~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~-~~~~~~~g~~~~~~~l 316 (457)
T 1hzh_H 238 PCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTK-PREEQYNSTYRVVSVL 316 (457)
T ss_dssp SCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEE-EEEECTTSCEEEEEEE
T ss_pred CCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccc-cceecCCCcEEEEEEE
Confidence 01123454 22222222 5679999999999987652 1389999999887532211 1111112112223344
Q ss_pred EeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 231 KIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 231 ~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
.|.....+|+|.|+|.|.|..+.
T Consensus 317 ~i~~~d~~d~G~Y~C~a~n~~~~ 339 (457)
T 1hzh_H 317 TVLHQDWLNGKEYKCKVSNKALP 339 (457)
T ss_dssp CCCHHHHHHTCCEEEEEECTTSS
T ss_pred EECHHHccCCCcEEEEEeCCCCC
Confidence 44333334499999999976543
No 93
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.94 E-value=2e-26 Score=179.12 Aligned_cols=171 Identities=17% Similarity=0.185 Sum_probs=125.9
Q ss_pred ceEecCCCeEEEEEE---EEecCCCeeEEeeCCeeCCC-----------------CCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 74 NKICDLGDTVRFQCS---VTGQPAPWTSWSKDGKPATP-----------------NARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~---~~~~p~~~v~W~~~~~~~~~-----------------~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
++++..|++++|.|. +.+.|.+.|+|+|++..+.. ..++.+....+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 456889999999996 45678999999997643211 1234444456678899999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC--C
Q psy1095 134 GLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD--S 211 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~--~ 211 (325)
|.|+|.+.|..+.....+.|.|..+ |.+...+....+.+|+.+.|.|.+.|.|. |.+.|++++..+... .
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p------~~~~~~~~~~~v~~g~~~~l~C~~~G~P~--P~v~W~~~~~~~~~~~~~ 153 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKP------LTLSVHSERSQFPDFSVLTVTCTVNAFPH--PHVQWLMPEGVEPAPTAA 153 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEE------EEEEEEEEECCSSCSCCEEEEEEEEEESC--CEEEECCC----------
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCC------ceeeecceeEEEcCCCEEEEEEEcCCCCC--CEEEEEECCeeecCcccc
Confidence 9999999999998888888888754 45555555566788999999999999998 899999876654322 1
Q ss_pred CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe
Q psy1095 212 DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT 256 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 256 (325)
..+.....++ ....+.|.+++.+|+|.|+|.|.|..|+...
T Consensus 154 ~~r~~~~~~g----~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 154 NGGVMKEKDG----SLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp --CCEECTTS----CEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred cceEEEeCCC----CEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 1122222333 3456777899999999999999999998764
No 94
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.94 E-value=3.1e-25 Score=170.04 Aligned_cols=175 Identities=22% Similarity=0.365 Sum_probs=137.8
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCC--eEEEEEccCCCCCCeEEEEEEEe
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKED--LRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+....+........ ...|.|.+++.+|+|.|+|.+.+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 5778888888899999999999999998999999999999987765555444332 46799999999999999999988
Q ss_pred CCee-EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC-eeEEeeCCEEeccCCCCceEEEec
Q psy1095 143 NYGS-VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH-DISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 143 ~~~~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
..+. ....+.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|. + .+.|++++..+..... .
T Consensus 82 ~~~~~~~~~~~l~V~~~------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~~v~W~~~~~~~~~~~~-------~ 146 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGV------PFFTVEPKDLAVPPNAPFQLSCEAVGPPE--PVTIVWWRGTTKIGGPAP-------S 146 (182)
T ss_dssp CTTCEECCCEEEEEECS------CEEEECCCCEEECTTCCEEEEEEEECSSS--CCEEEEEETTEECSCSEE-------S
T ss_pred CCCcEEEEEEEEEEecC------CeEEecCcceEecCCCEEEEEeEecCCCC--CCEEEEEcCCeECCCCCC-------C
Confidence 7654 345677888765 56666666778899999999999999887 6 9999999988754321 1
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe-EEEEEE
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT-SACLIV 262 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v 262 (325)
...|.|.++ +|+|.|+|.|.|..|.... .+.|.|
T Consensus 147 ------~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 147 ------PSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ------SEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ------ceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 258999988 5899999999999988753 666665
No 95
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.9e-25 Score=172.15 Aligned_cols=181 Identities=25% Similarity=0.404 Sum_probs=136.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC--CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP--NARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+|.|...|.+..+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++..... ..|.|.+++..|+|.|+|.+.
T Consensus 1 s~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN---NNLQILNINKSDEGIYRCEGR 77 (189)
T ss_dssp CCCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTT---SCEEETTCCGGGCEEEEEEEE
T ss_pred CCceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecC---CCEEEeeCCHhHCcEEEEEEE
Confidence 368899999999999999999999999989999999999887753 334444332 359999999999999999999
Q ss_pred eCCeeE--EEEEEEEEECCCcccCCCeeeecCc--CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 142 NNYGSV--EATARLEIMDPRAIISRPKVLNGLE--NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 142 ~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~--~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
+..+.. ...+.+.+..+ |.+..... ...+..|+.+.|.|.+.+.|. +.+.|++++..+.........
T Consensus 78 ~~~~~~~~~~~~~l~v~~~------p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~v~W~~~g~~~~~~~~~~~~- 148 (189)
T 2v5t_A 78 VEARGEIDFRDIIVIVNVP------PAISMPQKSFNATAERGEEMTFSCRASGSPE--PAISWFRNGKLIEENEKYILK- 148 (189)
T ss_dssp ETTTTEEEEEEEEEEEEEE------EEEECSCCEEEEETTSCCCEEEECEEEEESC--CEEEEEETTEECCCSSSEEEE-
T ss_pred EcCCCceEEEEEEEEecCC------CCcccccccccccccCCCcEEEEEEEccCCC--CeEEEEECCEECcCCCcEEEe-
Confidence 876432 34455555544 23322222 234567999999999999887 899999999988755432211
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
..+ ..|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 149 -~~~------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 149 -GSN------TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp -TTT------TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -cCC------CEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 222 479999999999999999999999999988888875
No 96
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.94 E-value=2.2e-26 Score=192.16 Aligned_cols=227 Identities=15% Similarity=0.119 Sum_probs=148.6
Q ss_pred eeeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccc----------ccccc---CCCCeeEecCCceEe
Q psy1095 11 LSVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAI----------RTRRL---TSSPRFYAVPHNKIC 77 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~----------~~~~~---~~~p~~~~~~~~~~v 77 (325)
....|.+++...............|.|.+++.+|+|.|+|.+.+... ....+ ..+|.+...|... +
T Consensus 52 ~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v 130 (316)
T 3vh8_G 52 NNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-V 130 (316)
T ss_dssp CSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-E
T ss_pred ceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-c
Confidence 35668777766443222233456889999999999999998764211 11122 1456777666655 8
Q ss_pred cCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEE-EEecCCeEEEEEccCCCCCCeEEEEEEEeCCee-----EEEEE
Q psy1095 78 DLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVT-IREKEDLRFLEISEVTLEDAGLYTIKVENNYGS-----VEATA 151 (325)
Q Consensus 78 ~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~ 151 (325)
.+|++++|.|.+. .+.+.+.|++++..+....... .........|.|.+++.+|+|.|+|.+.|..+. ....+
T Consensus 131 ~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~ 209 (316)
T 3vh8_G 131 KSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPL 209 (316)
T ss_dssp ETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCE
T ss_pred CCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCE
Confidence 8999999999995 4567899999998775322111 111123457999999999999999999987653 13445
Q ss_pred EEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEE
Q psy1095 152 RLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLK 231 (325)
Q Consensus 152 ~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (325)
.|.|... ..+|.+...+. ..+.+|+.++|.|.+. .+. +.+.|++++..+...... ...........|.
T Consensus 210 ~l~V~~~---~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~--~~~~W~k~g~~~~~~~~~-----~~~~~~~~~~~L~ 277 (316)
T 3vh8_G 210 DIVVTGP---YEKPSLSAQPG-PKVQAGESVTLSCSSR-SSY--DMYHLSREGGAHERRLPA-----VRKVNRTFQADFP 277 (316)
T ss_dssp EEEEECS---SCCCEEEEESC-SCCCTTSCCEEEEEES-SCC--SEEEEEETTSSCCEEEEC-----EECTTSCEEEEEE
T ss_pred EEEecCC---CCCCeEEeCCC-CeecCCCcEEEEEECC-CCC--cEEEEEECCCcCCCceec-----eeccCCceeEEEE
Confidence 6666653 23455555443 3678899999999996 344 789999998765421110 0000111346899
Q ss_pred eCCCCCCCCeEEEEEEEeCCCc
Q psy1095 232 IPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 232 i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
|.+++ |+|.|+|.+.|..+.
T Consensus 278 i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 278 LGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp CC-------CEEEEEEEBTTBT
T ss_pred cCCcC--CCEEEEEEeecCCCc
Confidence 99999 999999999997653
No 97
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=8.2e-26 Score=186.24 Aligned_cols=238 Identities=13% Similarity=0.092 Sum_probs=154.9
Q ss_pred eecccCCCCcccCCCCCCC---CCCCCCcccCCCCCCCcccccccccccc--------cccCCCCe--eEecCCc--eEe
Q psy1095 13 VKLTRPSGLMSGHSTPRST---PRSTPPRSISPLSSRTFTPYSLNSAIRT--------RRLTSSPR--FYAVPHN--KIC 77 (325)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~l~i~~v~~~d~G~Y~c~~~~~~~~~--------~~~~~~p~--~~~~~~~--~~v 77 (325)
++|.+++..+......... ..+|.|.+++.+|+|.|+|.+.+..+.. +.+..|+. +...+.. ..+
T Consensus 28 v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v 107 (289)
T 3mjg_X 28 VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFL 107 (289)
T ss_dssp CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEE
T ss_pred EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEe
Confidence 5687777765332211111 2578899999999999999998866431 11221222 1111111 568
Q ss_pred cCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEE-EEEEEEEE
Q psy1095 78 DLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVE-ATARLEIM 156 (325)
Q Consensus 78 ~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~ 156 (325)
.+|+.+.|.|.+. .|.+.++|++.+........+ . .... +. ...|+|.|+|.+.+..+... ....+.|.
T Consensus 108 ~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~--~--~~~~-~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~ 177 (289)
T 3mjg_X 108 TEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPY--D--HQRG-FS----GIFEDRSYICKTTIGDREVDSDAYYVYRL 177 (289)
T ss_dssp SSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCE--E--TTTE-EE----ECCCSSEEEEEEEETTEEEECCCEEEEEC
T ss_pred ecCCeEEEEeEcC-CCCceEEEEeCCCCCccceee--c--CCcC-ee----eeccCcEEEEEEEeCCceeeeeeEEEEec
Confidence 8999999999998 677889999865322211111 1 1111 11 35799999999997766443 33456665
Q ss_pred CCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCC
Q psy1095 157 DPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVY 236 (325)
Q Consensus 157 ~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 236 (325)
.. .+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++............ ............|.|.+++
T Consensus 178 ~~----~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~--p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~I~~v~ 250 (289)
T 3mjg_X 178 QV----SSINVSVNAVQTVVRQGENITLMCIVIGNEV--VNFEWTYPRKESGRLVEPVTD-FLLDMPYHIRSILHIPSAE 250 (289)
T ss_dssp CC----CCCCCEEEESCSEEETTSCEEEEEEEESCSS--BEEEEECTTSSSSCCCCCEEE-ESCTTTTEEEEEEEESSCC
T ss_pred CC----CCCCcEEeCCcceeEcCCCEEEEEEECCCCC--cceEEEcCCccCCCccccccc-ccCCcceEEEEEEEEcccC
Confidence 42 2355555555677899999999999999887 899999877644322211111 1111122355799999999
Q ss_pred CCCCeEEEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 237 PEDEGEFTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 237 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
.+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 251 ~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 251 LEDSGTYTCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEEEEC-
T ss_pred hhhCcEEEEEeecCCCCceeEEEEEEEEEec
Confidence 9999999999999999999999999965543
No 98
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.94 E-value=9.6e-28 Score=202.39 Aligned_cols=248 Identities=17% Similarity=0.210 Sum_probs=172.1
Q ss_pred eeeecccCCCCc--ccCC--CCCCCCCCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeE--ecCCceEecC
Q psy1095 11 LSVKLTRPSGLM--SGHS--TPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFY--AVPHNKICDL 79 (325)
Q Consensus 11 ~~~~~~~~~~~~--~~~~--~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~--~~~~~~~v~~ 79 (325)
..+.|.+++... .... .......+|.|.+++.+|+|.|+|.+.+..+.. +.+..+|... ....+..+.+
T Consensus 55 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 134 (339)
T 3o4o_C 55 INLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTL 134 (339)
T ss_dssp CBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEET
T ss_pred ceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEEC
Confidence 467788777652 2221 111234578899999999999999998765422 2222333211 1222346889
Q ss_pred CCeEEEEEE-----EEecCCCeeEEeeCCeeCCCC-CcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCe----eEEE
Q psy1095 80 GDTVRFQCS-----VTGQPAPWTSWSKDGKPATPN-ARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYG----SVEA 149 (325)
Q Consensus 80 g~~v~l~C~-----~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~ 149 (325)
|+.+.|.|. +.+.|.+.+.|++++..+... .++... .+...|.|.+++.+|+|.|+|.+.|..+ ....
T Consensus 135 g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~ 212 (339)
T 3o4o_C 135 STSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITR 212 (339)
T ss_dssp TSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEE
T ss_pred CCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEc--CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEE
Confidence 999999999 788899999999999988765 344333 2234799999999999999999998776 4566
Q ss_pred EEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE---EecCCCCCeeEEeeCCEEeccCCCCce-E-----EEec
Q psy1095 150 TARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV---QVVPPNDHDISWFRNNRLIKLDSDMKP-E-----VQVD 220 (325)
Q Consensus 150 ~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~---~~~~~~~~~~~W~~~~~~~~~~~~~~~-~-----~~~~ 220 (325)
.+.|.|...+. ..+|.+...+....+..|+.+.|.|.+ .+.|.. +.+.|++++..+........ . ....
T Consensus 213 ~~~l~V~~~~~-~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~-~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 290 (339)
T 3o4o_C 213 SIELRIKKKKE-ETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLT-TMLWWTANDTHIESAYPGGRVTEGPRQEYSE 290 (339)
T ss_dssp EEEEEEECCCC-CCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSS-CEEEEESSSSCSSSSSCSSSCEECCCEECCC
T ss_pred EEEEEEEcCCC-CCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCC-ceEEEEECCeecccccccccceecceEEecc
Confidence 77888876432 134666666666678899999999999 787732 89999999877643211000 0 0011
Q ss_pred CCcceeEEEEEeCCCCCCCC-eEEEEEEEeCCCcEEeEEEEEE
Q psy1095 221 SKENLVIARLKIPHVYPEDE-GEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.......+.|.|.+++.+|+ |.|+|.|.|..|.....+.+.+
T Consensus 291 ~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 291 NNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp SSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred cCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 11122344799999999997 9999999999998877665543
No 99
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=8.7e-26 Score=186.09 Aligned_cols=231 Identities=14% Similarity=0.159 Sum_probs=143.2
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCC-eEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKED-LRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
|.|...+....+.+|+++.|.|.+.+. ++|++++..+. .+......+. ..+|.|.+++.+|+|.|+|.+.|..
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 445555556778999999999998763 99999998773 1222222221 3679999999999999999998877
Q ss_pred ee---EEEEEEEEEECCCcccCCCeeeecCc--CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEe
Q psy1095 145 GS---VEATARLEIMDPRAIISRPKVLNGLE--NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQV 219 (325)
Q Consensus 145 ~~---~~~~~~l~v~~~~~~~~~p~~~~~~~--~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 219 (325)
|. ....+.+.|..+. .+.+..... ...+.+|+.+.|.|.+. .|. +.+.|++.+......... ..
T Consensus 75 g~~~~~~~~~~v~v~~p~----~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~--~~v~w~~~~~~~~~~~~~----~~ 143 (289)
T 3mjg_X 75 GLETDERKRLYIFVPDPT----VGFLPNDAEELFIFLTEITEITIPCRVT-DPQ--LVVTLHEKKGDVALPVPY----DH 143 (289)
T ss_dssp ----CCCEEEEEECCCTT----CCBCCCCHHHHEEEESSCCCEEECCCBS-CTT--SCEEEEESSCCSCCCCCE----ET
T ss_pred CCCcCcEEeEEEEEECCC----cCcccCCCCcceEEeecCCeEEEEeEcC-CCC--ceEEEEeCCCCCccceee----cC
Confidence 64 2234444443221 122111111 15678899999999998 555 678888765322211110 01
Q ss_pred cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe-EEEEEEEeeCCeecC---------CC------------CceE
Q psy1095 220 DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT-SACLIVDVVKGKDLT---------SD------------GRLN 277 (325)
Q Consensus 220 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~---------~~------------~~~~ 277 (325)
.. ..+ ...|+|.|+|.|.|..+.... ...|.+.....+.+. .+ ....
T Consensus 144 ~~------~~~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~ 212 (289)
T 3mjg_X 144 QR------GFS-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVN 212 (289)
T ss_dssp TT------EEE-----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBE
T ss_pred Cc------Cee-----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcc
Confidence 11 111 257999999999987655433 233443221111000 00 0001
Q ss_pred E-EE---------------------eCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 278 I-IT---------------------VGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 278 ~-~~---------------------~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
+ +. ......|.|.++..+|+|.|+|.|.|..|....++.|.|.+.|.
T Consensus 213 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 213 FEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp EEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC-
T ss_pred eEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEec
Confidence 1 11 01235899999999999999999999999999999999998764
No 100
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.94 E-value=3.6e-25 Score=173.86 Aligned_cols=178 Identities=21% Similarity=0.300 Sum_probs=139.6
Q ss_pred CCCeEEEEEEEEec-CCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEEC
Q psy1095 79 LGDTVRFQCSVTGQ-PAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMD 157 (325)
Q Consensus 79 ~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 157 (325)
.++.+.|.|.+.+. |.+.++|++++..+....++.+...+....|.|.+++.+|+|.|+|.+.+..+.....+.|.|..
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~ 95 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQA 95 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEee
Confidence 57788888988774 58899999999999888888887777778899999999999999999999888776666665432
Q ss_pred CC--------------cccCCCeee-ecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 158 PR--------------AIISRPKVL-NGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 158 ~~--------------~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
.. .....|.+. ..+....+..|+.+.|.|.+.+.|. +.+.|++++..+........... .+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~v~W~~~~~~~~~~~~~~~~~~-~~- 171 (212)
T 2r15_A 96 YDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPP--PEVSWLKNEKALAQTDHCNLKFE-AG- 171 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSC--CEEEEEETTEEECCCSSEEEEEE-TT-
T ss_pred ccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCC--ceEEEEECCeECccCCCEEEEEc-CC-
Confidence 00 000123333 3344567889999999999999888 88999999999876655433311 12
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
....|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 172 ---~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 172 ---RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp ---TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ---CEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 24689999999999999999999999998888888874
No 101
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.93 E-value=2.4e-25 Score=177.15 Aligned_cols=200 Identities=27% Similarity=0.395 Sum_probs=147.9
Q ss_pred CCCeeEecC----CceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEE-EecCCeEEEEEccCCCCCCeEEEE
Q psy1095 64 SSPRFYAVP----HNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTI-REKEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 64 ~~p~~~~~~----~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
.+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+....++.. ........|.|.+++..|+|.|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 466766555 677799999999999999999999999999998865432210 111223479999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCCcccCCCeeee-cCcCeeEecCCcEEEEEEEEecCCCCCeeEEee----CCEEeccCCCC
Q psy1095 139 KVENNYGSVEATARLEIMDPRAIISRPKVLN-GLENLRCCDGDSVTFECQVQVVPPNDHDISWFR----NNRLIKLDSDM 213 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~-~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~----~~~~~~~~~~~ 213 (325)
.+.+..+.......|.|...+. .+|.+.. .+....+..|+.+.|.|.+.+.|. +.+.|++ ++..+......
T Consensus 94 ~~~n~~~~~~~~~~l~V~~~~~--~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~g~~~~~~~~~ 169 (231)
T 3ojm_B 94 VVENEYGSINHTYHLDVVERSR--HRPILQAGLPANASTVVGGDVEFVCKVYSDAQ--PHIQWIKHVEKNGSKYGPDGLP 169 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCCC--CCCEECTTCSCCEEEETTCCEEEECCEECSSC--CEEEEEEECCBTTBSBCTTSCB
T ss_pred EEecccCcccccEEEEEEcCCC--CCCceeeccCCceEEEeCCcEEEEEEEecCCC--CEEEEEECCCCCCccccCCCcc
Confidence 9999988888888888876432 1233322 234567889999999999999888 8999999 77666544332
Q ss_pred ceEEEe-cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 214 KPEVQV-DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 214 ~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
...... ..........|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 224 (231)
T 3ojm_B 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQ 224 (231)
T ss_dssp CEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-
T ss_pred eEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCC
Confidence 221111 111111224799999999999999999999999998888888865544
No 102
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.93 E-value=2.8e-25 Score=175.23 Aligned_cols=186 Identities=23% Similarity=0.424 Sum_probs=139.4
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC--cEEEEecCCeE--EEEEccCCCCCCeEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA--RVTIREKEDLR--FLEISEVTLEDAGLYTI 138 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C 138 (325)
..+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+.... .......++.. .|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 468999999999999999999999999999999999999999886542 22222222211 23678899999999999
Q ss_pred EEEeCCeeEE-EEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeEEeeCCEEeccCCCC---
Q psy1095 139 KVENNYGSVE-ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDISWFRNNRLIKLDSDM--- 213 (325)
Q Consensus 139 ~~~~~~~~~~-~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~W~~~~~~~~~~~~~--- 213 (325)
.+.+..+... ....|.|... +|.+...+....+..|+.+.|.|.+ .+.|. +.+.|++++..+......
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~-----~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~--~~v~W~~~g~~~~~~~~~~~~ 159 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVL-----RDDFRVEPKDTRVAKGETALLECGPPKGIPE--PTLIWIKDGVPLDDLKAMSFG 159 (217)
T ss_dssp EEEETTEEEECCCEEEEECEE-----CCSCSBCCCCEEECTTSCEEECCBCCCEESC--CEEEEEETTEEECCCCCC---
T ss_pred EEecCCCccccccceEEEEEe-----CCCcEECCCccEEcCCCeEEEEEECCCCCCC--CeEEEEECCcCCCcccccccc
Confidence 9999887553 3455555432 2333444456678899999999998 78888 899999999988743211
Q ss_pred ---ceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 214 ---KPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 214 ---~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
....... ..|.|.+++.+|+|.|+|.|.|..|....+..+.+
T Consensus 160 ~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 160 ASSRVRIVDG-------GNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLI 204 (217)
T ss_dssp CCCSEEEETT-------TEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred cCCcEEecCC-------CcEEEeeCCHHHCeEEEEEEEcccceeccccEEEE
Confidence 1111122 37999999999999999999999998877665555
No 103
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=1.2e-27 Score=208.47 Aligned_cols=219 Identities=15% Similarity=0.170 Sum_probs=138.2
Q ss_pred CCCCCcccCCCCCCCcccccccccc-----cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeEEee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI-----RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTSWSK 101 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~-----~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~~ 101 (325)
.+|.|.+++.+|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k 157 (434)
T 1igy_B 78 ANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 157 (434)
T ss_dssp BCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETT
T ss_pred EEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEee
Confidence 4789999999999999999977421 112222 34555544333346789999999999885 776 999999
Q ss_pred CCeeCCCCCcEEEEecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCC------cccCCCeeeecCc
Q psy1095 102 DGKPATPNARVTIREKED---LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPR------AIISRPKVLNGLE 172 (325)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~------~~~~~p~~~~~~~ 172 (325)
++..+...........+. ...|.|.++..+| |.|+|.+.|..+.......+.+.... .....|.+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p 236 (434)
T 1igy_B 158 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPP 236 (434)
T ss_dssp TTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECC
T ss_pred CCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCC
Confidence 987532100000000011 1358899999888 99999999988754333333221100 0000033332222
Q ss_pred Cee--EecCCcEEEEEEEEecCC--CCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEE
Q psy1095 173 NLR--CCDGDSVTFECQVQVVPP--NDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVA 248 (325)
Q Consensus 173 ~~~--v~~g~~v~l~C~~~~~~~--~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 248 (325)
... +.+|+.+.|.|.+.+.++ +.+.+.|++++..+......... ...+..+...+.|.|.++..+|.|.|+|.|.
T Consensus 237 ~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 315 (434)
T 1igy_B 237 KPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPRE-EQFNSTFRVVSALPIMHQDWLNGKEFKCRVN 315 (434)
T ss_dssp CHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCC-CCCSSSCCCCCCEECCHHHHHHTCCCBCCBC
T ss_pred ChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcce-eCCCCcEEEEEEEEECHHHccCCCcEEEEEE
Confidence 222 778999999999998752 22689999998776533211110 0111122233579999999999999999999
Q ss_pred eCCCc
Q psy1095 249 NELGE 253 (325)
Q Consensus 249 ~~~~~ 253 (325)
|..+.
T Consensus 316 n~~~~ 320 (434)
T 1igy_B 316 SAAFP 320 (434)
T ss_dssp CSSCS
T ss_pred CCCCC
Confidence 87764
No 104
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.1e-24 Score=172.96 Aligned_cols=200 Identities=27% Similarity=0.425 Sum_probs=144.7
Q ss_pred CCCeeEec----CCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcE-EEEecCCeEEEEEccCCCCCCeEEEE
Q psy1095 64 SSPRFYAV----PHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARV-TIREKEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 64 ~~p~~~~~----~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
.+|.+... +....+.+|+++.|.|.+.+.|.+.+.|++++..+....+. ..........|.|.+++..|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 46665533 34567899999999999999999999999999988654322 11111233479999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCCcccCCCeee-ecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee----CCEEeccCCCC
Q psy1095 139 KVENNYGSVEATARLEIMDPRAIISRPKVL-NGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR----NNRLIKLDSDM 213 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~----~~~~~~~~~~~ 213 (325)
.+.+..+.....+.|.|...+. ..|.+. ..+....+..|+.+.|.|.+.+.|. +.+.|++ ++..+......
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~--~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~--p~v~W~~~~~~~g~~~~~~~~~ 165 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSP--HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQ--PHIQWLKHVEVNGSKVGPDGTP 165 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCC--CCCEEEECTTCSEECCTTCCEEEEEEEECSSC--CEEEEEEECCSSSCSSCTTTCC
T ss_pred EEeecCCceEEEEEEEEeccCC--CCceeecCCCccceecCCCEEEEEEEEecCCC--CEEEEEEcccCCCcccCCCCce
Confidence 9999988888888888876422 123333 2345567888999999999999888 8999999 77766544432
Q ss_pred ceEEE--ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 214 KPEVQ--VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 214 ~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
..... ...........|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 221 (241)
T 3grw_A 166 YVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRA 221 (241)
T ss_dssp CEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-----
T ss_pred eeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCC
Confidence 22111 1111222457899999999999999999999999998888888855443
No 105
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.9e-24 Score=169.57 Aligned_cols=173 Identities=21% Similarity=0.358 Sum_probs=140.4
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
..+.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|+|.|+|.+.+.
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEECT
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEcC
Confidence 56788899999999999999999999999999999999999886542 246999999999999999999988
Q ss_pred CeeE-EEEEEEEEECCCcc---------cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCC
Q psy1095 144 YGSV-EATARLEIMDPRAI---------ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDM 213 (325)
Q Consensus 144 ~~~~-~~~~~l~v~~~~~~---------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~ 213 (325)
.+.. ...+.|.|...+.. ..+|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+.....
T Consensus 88 ~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~--~~v~W~~~~~~~~~~~~- 164 (218)
T 3k0w_A 88 FTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPI--PHYQWFKNELPLTHETK- 164 (218)
T ss_dssp TCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSC--CEEEEEETTEECTTCCS-
T ss_pred CCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCC--CeEEEEECCEECCCCCC-
Confidence 7643 44567777765321 12366677777778899999999999999888 89999999988865432
Q ss_pred ceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc-EEeEEEEEE
Q psy1095 214 KPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE-VVTSACLIV 262 (325)
Q Consensus 214 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v 262 (325)
..|.|.+++.+|+|.|+|.|.|..|. ....+.|.|
T Consensus 165 --------------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 200 (218)
T 3k0w_A 165 --------------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 200 (218)
T ss_dssp --------------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred --------------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEE
Confidence 37999999999999999999998876 445566666
No 106
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.93 E-value=1.5e-24 Score=170.22 Aligned_cols=187 Identities=22% Similarity=0.352 Sum_probs=139.6
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC-----cEEEEecCCeE--EEEEccCCCCCCeE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA-----RVTIREKEDLR--FLEISEVTLEDAGL 135 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~~--~l~i~~~~~~d~G~ 135 (325)
..||.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+.... .......+... .|.|.+++..|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 457899999999999999999999999999999999999998876432 11122222211 13445679999999
Q ss_pred EEEEEEeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeEEeeCCEEeccCCCC
Q psy1095 136 YTIKVENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDISWFRNNRLIKLDSDM 213 (325)
Q Consensus 136 Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~W~~~~~~~~~~~~~ 213 (325)
|+|.+.+..+.. ...+.|.|... ++.+...+....+..|+.+.|.|.+ .+.|. +.+.|++++..+......
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~-----~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~v~W~~~~~~l~~~~~~ 159 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAIL-----RDDFRQNPSDVMVAVGEPAVMECQPPRGHPE--PTISWKKDGSPLDDKDER 159 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEE-----CSSCSBCCCCEEEETTSCEEEECBCCCEESC--CEEEEEETTEEECTTSTT
T ss_pred EEEEEECCCCceeecceEEEEEec-----cccceeCCCceEecCCCcEEEEEecCCCCCC--CEEEEEECCccCCCCcce
Confidence 999999987754 34556666543 1233344456678899999999998 88888 899999999988754432
Q ss_pred ceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE-EEEEEEee
Q psy1095 214 KPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS-ACLIVDVV 265 (325)
Q Consensus 214 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~ 265 (325)
... .. ..|.|.+++.+|+|.|+|.|.|..|..... +.|.|...
T Consensus 160 ~~~--~~-------~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~ 203 (212)
T 2v9r_A 160 ITI--RG-------GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLER 203 (212)
T ss_dssp EEE--ET-------TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEc--cC-------CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeC
Confidence 221 23 379999999999999999999999886654 77877543
No 107
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.93 E-value=3e-24 Score=189.21 Aligned_cols=219 Identities=15% Similarity=0.140 Sum_probs=133.9
Q ss_pred CCCCCcccCCCCCCCcccccccccc---------c--ccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CC-C
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI---------R--TRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA-P 95 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~---------~--~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~ 95 (325)
.+|.|.+++++|+|.|.|.+.+..+ . .+.+. .+|.+...+.. .+.+|+.+.|.|.+.+. |. +
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~L~C~~~g~~P~~p 158 (475)
T 1iga_A 80 AYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVVIACLVQGFFPQEP 158 (475)
T ss_pred EEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEEEEEEEeeecCCCc
Confidence 4789999999999999999977542 0 12222 24555443322 23689999999999986 65 5
Q ss_pred -eeEEeeCCeeCCCCCcEEEE-ecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEEEEEEECCCc--------
Q psy1095 96 -WTSWSKDGKPATPNARVTIR-EKED----LRFLEISEVTLEDAGLYTIKVENNYGSV-EATARLEIMDPRA-------- 160 (325)
Q Consensus 96 -~v~W~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~-------- 160 (325)
.|.|++++............ ..++ ...|.|..+...|.|.|+|.+.|..+.. ...+.+.|...+.
T Consensus 159 ~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~ 238 (475)
T 1iga_A 159 LSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPP 238 (475)
T ss_pred eEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccc
Confidence 99999987532111000011 0111 1348888888899999999999887531 2233322211000
Q ss_pred ----ccCCCee-eecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCC
Q psy1095 161 ----IISRPKV-LNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPH 234 (325)
Q Consensus 161 ----~~~~p~~-~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 234 (325)
...+|.+ ...+....+.+|+.+.|.|.+.+.++. .+.+.| + +..+......... ...+..+...+.|.|.+
T Consensus 239 ~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~-~~~~g~~~~~~~L~I~~ 315 (475)
T 1iga_A 239 TPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPE-RDLCGCYSVSSVLPGCA 315 (475)
T ss_pred cCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCce-ECCCCCEEEEEEEEEch
Confidence 0023443 222222335789999999999987541 258999 4 4333221111110 11111223456899999
Q ss_pred CCCCCCeEEEEEEEeCCCcEE
Q psy1095 235 VYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 235 ~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
+..+|+|.|+|.|.|..+...
T Consensus 316 ~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 316 EPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred HHhccCCcEEEEEEcCCCCCc
Confidence 999999999999999877643
No 108
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=7.8e-24 Score=187.87 Aligned_cols=220 Identities=14% Similarity=0.124 Sum_probs=135.3
Q ss_pred CCCCCcccCCCCCCCcccccccccc------------------cccccC----CCCeeEe-cCCceEecCCCeEEEEEEE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI------------------RTRRLT----SSPRFYA-VPHNKICDLGDTVRFQCSV 89 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~------------------~~~~~~----~~p~~~~-~~~~~~v~~g~~v~l~C~~ 89 (325)
.+|+|++++++|+|.|.|.+.+... ..+.+. .+|.+.. .+.......|+.+.|.|.+
T Consensus 80 ~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~ 159 (512)
T 1zvo_C 80 FSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLI 159 (512)
T ss_pred EEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEE
Confidence 4789999999999999999876531 112222 2455442 2222112246899999999
Q ss_pred Eec-CCC-eeEEeeCCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE-----------E
Q psy1095 90 TGQ-PAP-WTSWSKDGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATA-----------R 152 (325)
Q Consensus 90 ~~~-p~~-~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~-----------~ 152 (325)
.+. |.| .|+|++++..............++ ...|.|.....+ .|.|+|.+.|..+...... .
T Consensus 160 ~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~ 238 (512)
T 1zvo_C 160 TGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQAS 238 (512)
T ss_pred EeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCE
Confidence 886 765 899999654321000000111111 234888877777 8999999999877544333 2
Q ss_pred EEEECCCc----------------------------------------------ccCCCeeeecC-cCeeEecCCcEEEE
Q psy1095 153 LEIMDPRA----------------------------------------------IISRPKVLNGL-ENLRCCDGDSVTFE 185 (325)
Q Consensus 153 l~v~~~~~----------------------------------------------~~~~p~~~~~~-~~~~v~~g~~v~l~ 185 (325)
+.+..+|. ...+|.+...+ ....+..|+.++|.
T Consensus 239 v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~ 318 (512)
T 1zvo_C 239 SVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFT 318 (512)
T ss_pred EEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEE
Confidence 33332211 11234443322 22345679999999
Q ss_pred EEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 186 CQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 186 C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
|.+.+++++...+.|++++..+.............+..+...+.|.|.....+|.|.|+|.|.|..+.
T Consensus 319 C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 319 CFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred EEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 99998755336999999998765211111111111223345578999999999999999999987653
No 109
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.93 E-value=1.4e-24 Score=170.34 Aligned_cols=182 Identities=21% Similarity=0.359 Sum_probs=133.4
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC------------CCCCcEEEEecCCeEEEEEccCCCCC
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA------------TPNARVTIREKEDLRFLEISEVTLED 132 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d 132 (325)
|..+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.... ..|.|.+++..|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D 76 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKD 76 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGG
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCccc
Confidence 456777788888999999999999998899999999987552 1123444332 469999999999
Q ss_pred CeEEEEEEEeCCe--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEE-EEecCCCCCeeEEeeCCE-Eec
Q psy1095 133 AGLYTIKVENNYG--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQ-VQVVPPNDHDISWFRNNR-LIK 208 (325)
Q Consensus 133 ~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~-~~~~~~~~~~~~W~~~~~-~~~ 208 (325)
+|.|+|.+.+..+ .....+.|.|..++. +........+.+|+.+.|.|. +.+.|. +.+.|++++. .+.
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~------~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~l~ 148 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVPPS------KPTISVPSSVTIGNRAVLTCSEHDGSPP--SEYSWFKDGISMLT 148 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBCCC------CCEEECCSEEETTSCEEEEEECSCCBSC--CEEEEEETTEESBC
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcCCC------CcccCCccccCCCCeEEEEEEcccCcCC--CEEEEEeCCccccc
Confidence 9999999998765 556677888876533 222223456889999999999 688887 8999999998 776
Q ss_pred cCCCCce-----EEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe--EEEEEE
Q psy1095 209 LDSDMKP-----EVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT--SACLIV 262 (325)
Q Consensus 209 ~~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v 262 (325)
....... ...... ....|.|.+++.+|+|.|+|.|.|..|.... .+.|.|
T Consensus 149 ~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 149 ADAKKTRAFMNSSFTIDP----KSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp -----CBSCSSSCEEECT----TTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEE
T ss_pred ccccccccccCceeEecC----CCceEEEEecChhhCcEEEEEEccccCCccccceEEEEE
Confidence 4332100 000111 1257999999999999999999999998843 445544
No 110
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.92 E-value=2.6e-24 Score=166.90 Aligned_cols=174 Identities=18% Similarity=0.198 Sum_probs=127.9
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|++..+.... ...........|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 46788888887 7899999999999887 678999999998775421 11111234577999999999999999999998
Q ss_pred Cee--EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 144 YGS--VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 144 ~~~--~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
.+. ....+.|.|.... .+|.+...+. ..+.+|+.++|.|.+.+. + +.+.|++++..+......... ...
T Consensus 81 ~g~~~~s~~~~l~V~~~~---~~p~~~~~~~-~~v~~G~~v~L~C~~~~~-~--~~~~w~k~g~~~~~~~~~~~~-~~~- 151 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAY---SKPTLSALPS-PLVTSGKSVTLLCQSRSP-M--DTFLLCKERAAHPLLCLRSEH-GAQ- 151 (196)
T ss_dssp TEEBCCCCCEEEEEECSS---CCCEEEEESC-SEECTTCCEEEEEEEEEE-E--EEEEEEETTCCCGGGSEEEEE-EEE-
T ss_pred CcccCCCccEEEEecCCC---CCCEEEeCCc-ceecCCCeEEEEEecCCC-C--CEEEEEeCCCcccceeecccc-ccc-
Confidence 872 3445667776532 2455555443 367899999999999874 3 589999998766433211110 011
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
.....|.|.+++.+|+|.|+|.|.|..+
T Consensus 152 ---~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 152 ---QHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp ---EEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred ---CcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 1346899999999999999999999875
No 111
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.92 E-value=3.5e-25 Score=187.19 Aligned_cols=206 Identities=17% Similarity=0.189 Sum_probs=153.7
Q ss_pred CCCCcccccccccccc-cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEE
Q psy1095 44 SSRTFTPYSLNSAIRT-RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRF 122 (325)
Q Consensus 44 d~G~Y~c~~~~~~~~~-~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
|.|.|+|.+.+..... ...-.+|.+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+...... .......+
T Consensus 136 ~~~~~~C~~~~~l~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~ 213 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLG 213 (347)
T ss_dssp GGGCCCCSSSSCSSCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC--CCCSSEEE
T ss_pred cccCCCCCCChHHhcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc--ceecccce
Confidence 6799999886621111 12226899999998889999999999999999999999999988764321110 12234567
Q ss_pred EEEccCCCCCCe-EEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEe
Q psy1095 123 LEISEVTLEDAG-LYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWF 201 (325)
Q Consensus 123 l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~ 201 (325)
|.|.+++..|+| .|+|.+.+..|.....+.|.|..+ |.+ ....+..|+.+.|.|.+.|.|. +.+.|+
T Consensus 214 L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~------P~i----~~~~~~~g~~v~l~C~~~g~P~--p~i~W~ 281 (347)
T 2ifg_A 214 LTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFP------ASV----QLHTAVEMHHWCIPFSVDGQPA--PSLRWL 281 (347)
T ss_dssp EEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEE------EEE----EECCCEESSSEEEEEEEEEESC--CEEEEE
T ss_pred EEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCC------Cee----eeccCccCceEEEEEEeeecCC--CcEEEE
Confidence 999999999999 999999999887777776666554 332 1112457899999999999988 899999
Q ss_pred eCCEEeccCCCCceEEEecC-CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 202 RNNRLIKLDSDMKPEVQVDS-KENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
+++..+.............+ ......+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 282 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 282 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp ETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred eCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 99998875443222211100 112245789999999999999999999999998888887763
No 112
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.92 E-value=1.4e-24 Score=169.28 Aligned_cols=170 Identities=16% Similarity=0.216 Sum_probs=129.3
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCe-eEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPW-TSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..|.+...|....+.+|++++|.|.+.+.|.+. +.|++++..+.... ..|.|.+++.+|+|.|+|.+.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 457788888878899999999999999887765 99999998876432 4699999999999999999976
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
. .....+.|.|... |.+...+ ...+.+|+.+.|.|.+.+.++. +.+.|++++..+.... .
T Consensus 76 ~--~~s~~~~l~V~~~------p~~~~~~-~~~v~~G~~v~L~C~~~~~~p~-~~v~W~k~g~~~~~~~-------~--- 135 (204)
T 3sgj_C 76 S--TLSDPVQLEVHIG------WLLLQAP-RWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKGRKYFH-------H--- 135 (204)
T ss_dssp S--BCCCCEEEEEECS------SEEEECS-CSEEETTCCEEEEEEEGGGCCC-EEEEEEETTEEEEEEE-------E---
T ss_pred C--cccccEEEEEecC------ceEecCC-ceeEeCCCcEEEEEEecCCCCC-ceEEEEECCcEeeccc-------C---
Confidence 4 3344566777654 3333333 3678899999999999776543 7899999998764211 1
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeC-CCcEEeEEEEEEEeeCC
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANE-LGEVVTSACLIVDVVKG 267 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~l~v~~~~~ 267 (325)
...|.|.+++.+|+|.|+|.|.|. .+..+..+.|.|...+.
T Consensus 136 ----~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 136 ----NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp ----CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred ----CceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 247999999999999999999994 44455566777754443
No 113
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.92 E-value=1.7e-24 Score=170.15 Aligned_cols=189 Identities=14% Similarity=0.202 Sum_probs=136.1
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeC--CeeC------------CCCCcEEEEecCCeEEEEEccCCCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKD--GKPA------------TPNARVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~ 131 (325)
|.+...| ...+.+|++++|.|.+.+.|.+.+.|+|. +... ....++.........+|.|.+++.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 4455556 77899999999999999889999999982 2111 0234666555666788999999999
Q ss_pred CCeEEEEEEEeCCe---eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEec
Q psy1095 132 DAGLYTIKVENNYG---SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIK 208 (325)
Q Consensus 132 d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~ 208 (325)
|+|.|+|.+.+..+ .......|.|...+. .+|.+...+....+..|+.++|.|.+.+.+++.+.+.|++++..+.
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~--~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPN--AAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPIT 158 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCC--BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCC--CCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccC
Confidence 99999999998876 344556777774321 3466666555555558999999999998754325999999999886
Q ss_pred cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEE
Q psy1095 209 LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSA 258 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 258 (325)
.......... .+......+.|.|.++..+|.|.|+|.|.|..+.....+
T Consensus 159 ~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 159 QGVKTTQPSK-SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TTEEECCCEE-ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred CCcccCCcCc-cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 4321111111 222233446799999999999999999999886555443
No 114
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.92 E-value=4.6e-24 Score=166.02 Aligned_cols=181 Identities=20% Similarity=0.222 Sum_probs=134.5
Q ss_pred EecCCceEecCCCeEEEEEE-EEecCC-CeeEEeeCCeeCCC--CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 69 YAVPHNKICDLGDTVRFQCS-VTGQPA-PWTSWSKDGKPATP--NARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~-~~~~p~-~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
...+....+.+|+++.|.|. +.+.|. +.+.|++++..+.. ..+.... .....|.|.+++.+|+|.|+|.+.+..
T Consensus 12 ~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 89 (201)
T 3s97_C 12 PEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVS--QTNGNLYIANVEASDKGNYSCFVSSPS 89 (201)
T ss_dssp SSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEEC--TTTCCEEESSCCGGGCEEEEEEEEEGG
T ss_pred cCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEE--cCCCeEEECcCCcccCeEEEEEEEecC
Confidence 34456778999999999999 788888 99999999877642 2222222 223469999999999999999999865
Q ss_pred eeEEE---EEEEEEECC-CcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec
Q psy1095 145 GSVEA---TARLEIMDP-RAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 145 ~~~~~---~~~l~v~~~-~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
+.... .+.+.+... .....+|.+........+..|+.+.|.|.+.+.|. +.+.|++++..+..... ....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~v~W~~~~~~~~~~~~----~~~~ 163 (201)
T 3s97_C 90 ITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLEPMPSTAE----ISTS 163 (201)
T ss_dssp GTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESC--CEEEEEETTBCCCTTCE----EETT
T ss_pred CCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCC--CceEEEeCCCcCCCcee----ecCC
Confidence 53332 233333322 11123455655556778899999999999999988 89999999986653311 1122
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
+ ..|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 164 ~------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 164 G------AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp T------TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred C------CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 2 489999999999999999999999999888888774
No 115
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.92 E-value=6.9e-23 Score=159.45 Aligned_cols=188 Identities=18% Similarity=0.291 Sum_probs=131.2
Q ss_pred eeEecCCceE-ecCCCeEEEEEEEEecCCCeeEEeeCC-eeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 67 RFYAVPHNKI-CDLGDTVRFQCSVTGQPAPWTSWSKDG-KPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 67 ~~~~~~~~~~-v~~g~~v~l~C~~~~~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
.+.+.|.... +.+|+++.|.|.+.|.|.|.+.|++.. ..+. .. ....+....|.|.+++.+|+|.|+|.+.|..
T Consensus 2 ~v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 77 (202)
T 1vca_A 2 KIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCES 77 (202)
T ss_dssp EEEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SE--EEEETTEEEEEESSCCGGGCSEEEEEEEETT
T ss_pred eEEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ce--EEEcCCccEEEECcCCHHHCEEEEEEEEECC
Confidence 3455666554 459999999999999999999999843 2221 11 1223445679999999999999999999998
Q ss_pred eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEeeCCEEeccCCCCceEEEecCCc
Q psy1095 145 GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWFRNNRLIKLDSDMKPEVQVDSKE 223 (325)
Q Consensus 145 ~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 223 (325)
+.....+.|.|...+.. +.+.. ...+.+|+.++|.|.+.+.++. .+.+.|++++..+......... .....
T Consensus 78 ~~~~~~~~l~V~~~p~~---~~~~~---~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~--~~~~~ 149 (202)
T 1vca_A 78 RKLEKGIQVEIYSFPKD---PEIHL---SGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDA--DRKSL 149 (202)
T ss_dssp EEEEEEEEEEEEBCCSC---CEEEE---SSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCC--SSCCC
T ss_pred ceEeeEEEEEEEeCCCC---CEeCC---ceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECccccccccc--CcCcc
Confidence 88788888999876431 33322 2568899999999999986542 2479999999877532110000 00001
Q ss_pred ceeEEEEEeCCCCCCCCeEEEEEEEeCCCc-------EEeEEEEEEEeeC
Q psy1095 224 NLVIARLKIPHVYPEDEGEFTCRVANELGE-------VVTSACLIVDVVK 266 (325)
Q Consensus 224 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-------~~~~~~l~v~~~~ 266 (325)
......|.|.....+|.|.|+|.|.|..+. ...+..|.|.+.+
T Consensus 150 ~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 150 ETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp EEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred eEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 123456788888889999999999998765 3456667775443
No 116
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.92 E-value=3.2e-23 Score=161.57 Aligned_cols=180 Identities=17% Similarity=0.199 Sum_probs=131.3
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCC-----CeeEEee-CCeeCCCCCcEEEEec---CCeEEEEEccCCCCCCeEEE
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPA-----PWTSWSK-DGKPATPNARVTIREK---EDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~-----~~v~W~~-~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~ 137 (325)
.+..++....+.+|+++.|.|.+.+.|. +.+.|++ ++.......++.+... .+..+|.|.+++.+|+|.|+
T Consensus 4 ~v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (202)
T 3bp6_B 4 TVTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYR 83 (202)
T ss_dssp CEECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEE
Confidence 3445556778999999999999988776 7899999 4444443445554432 14578999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 138 IKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
|.+.+..+.....+.|.|...+ ..|.+.. ..+..|+.+.|.|.+.|.|. +.+.|++++..+... ...
T Consensus 84 C~~~~~~~~~~~~~~l~V~~~~---~~p~~~~----~~~~~g~~v~l~C~~~g~P~--p~v~W~~~~~~~~~~----~~~ 150 (202)
T 3bp6_B 84 CLVICGAAWDYKYLTVKVKASY---MRIDTRI----LEVPGTGEVQLTCQARGYPL--AEVSWQNVSVPANTS----HIR 150 (202)
T ss_dssp EEEEETTEEEEEEEEEEEEBCC---CCEEEEE----EECTTTCCEEEEEEEEEBSC--CEEEETTCCSCCEEE----EEE
T ss_pred EEEEeCCCcceEEEEEEecCCC---CcccEEE----EecCCCCeEEEEEEccccCC--ceEEEEeCCCCccCc----eee
Confidence 9999998877888888887653 2233321 13457999999999999888 899999987654210 010
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
...+ ....+.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 151 ~~~~----~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 151 TPEG----LYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp CTTS----CEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred CCCC----CEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 0111 23567778888999999999999999999888887763
No 117
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.92 E-value=1.1e-23 Score=165.62 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=127.0
Q ss_pred cCCceEecCC--CeEEEEEEEEecCCCeeEEeeC---CeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 71 VPHNKICDLG--DTVRFQCSVTGQPAPWTSWSKD---GKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 71 ~~~~~~v~~g--~~v~l~C~~~~~p~~~v~W~~~---~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
.|..+.+.+| ++++|.|.+.+ |.+.++|++. +..+....++..... ..|.|.+++.+|+|.|+|.+.+..+
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~---~~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSK---KGFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETT---TEEEEEGGGTTTCSEEEEEEC----
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCC---ccEEEccCChhcCceEEEEEEECCe
Confidence 4567789999 99999999976 7789999884 666665544443322 3599999999999999999987544
Q ss_pred eEEE-EEEEEEECCCcccCCCeeeecCcC-eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC-
Q psy1095 146 SVEA-TARLEIMDPRAIISRPKVLNGLEN-LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK- 222 (325)
Q Consensus 146 ~~~~-~~~l~v~~~~~~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~- 222 (325)
.... .+.|.|... ..|.+...+.. ..+.+|+.++|.|.+.+.|.+.+.+.|++++..+..... .........
T Consensus 89 ~~~s~~~~l~v~~~----~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~-~~~~~~~~~~ 163 (213)
T 2x1w_L 89 SYQSIMYIVVVVGY----RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKL-VNRDLKTQSG 163 (213)
T ss_dssp CEECCCEEEEECBC----CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEE-EEEEECCCSS
T ss_pred eEEEEEEEEEEeCC----cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEE-eccccccccC
Confidence 3322 255666431 22444444433 378999999999999987653368999998876432100 000000000
Q ss_pred --cceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 223 --ENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 223 --~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
.....+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 164 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 164 SEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp CSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEec
Confidence 022346899999999999999999999999998888888854
No 118
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.91 E-value=2.2e-25 Score=186.61 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=151.2
Q ss_pred eeeecccCCCCcccCCC----C-C----CCCCCCCCcccCCCCCCCccccccccccccc-c-------cCCCCee-EecC
Q psy1095 11 LSVKLTRPSGLMSGHST----P-R----STPRSTPPRSISPLSSRTFTPYSLNSAIRTR-R-------LTSSPRF-YAVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~----~-~----~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~-~-------~~~~p~~-~~~~ 72 (325)
..++|.+++..+..... . . .....|.|.+.+..|+|.|+|.+.+...... . ...+|.+ ...|
T Consensus 41 ~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p 120 (323)
T 2wqr_A 41 IQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRP 120 (323)
T ss_dssp EEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCC
T ss_pred eEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCC
Confidence 57888887766543211 0 0 0112456777888899999999987654221 1 1123433 4555
Q ss_pred CceEecCCCeEEEEEEEEec-CCC---eeEEeeCC-eeCCCCCcEEEEecC----CeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 73 HNKICDLGDTVRFQCSVTGQ-PAP---WTSWSKDG-KPATPNARVTIREKE----DLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~~-p~~---~v~W~~~~-~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
....+.+|+++.|.|.+.+. |.+ .+.|++++ ..+...........+ ....|.|.+++.+|+|.|+|.+.|.
T Consensus 121 ~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 200 (323)
T 2wqr_A 121 SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 200 (323)
T ss_dssp CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECC
Confidence 55568899999999999885 566 89999975 444322222111111 1246999999999999999999987
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCc-eEEEecCC
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMK-PEVQVDSK 222 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~-~~~~~~~~ 222 (325)
..... ..+.|........+|.+...........|+.+.|.|.+.+.+++.+.+.|+++|..+....... ......+.
T Consensus 201 ~~~~~--~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 278 (323)
T 2wqr_A 201 HLPRA--LMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGS 278 (323)
T ss_dssp TSSSC--EEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSS
T ss_pred CCCCC--eeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCC
Confidence 64322 2233322111123455544332222223999999999998655325899999999876432100 00011122
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
.+...+.|.|..+..+|+|.|+|.|.|....
T Consensus 279 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 279 GFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 3345578999999999999999999998765
No 119
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=8.6e-24 Score=178.54 Aligned_cols=180 Identities=14% Similarity=0.246 Sum_probs=123.3
Q ss_pred ecCCceEecCCCeEEEEEEEEec--CCCeeEEeeC--CeeC-----------------CCCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKD--GKPA-----------------TPNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++++|.|.+.+. +.+.+.|+|+ +..+ ....++.+..+ .+..+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 45667789999999999999876 3678999986 3221 11246665543 346789999
Q ss_pred cCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEE
Q psy1095 127 EVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRL 206 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~ 206 (325)
+++.+|+|.|.|.+.+..+.......|.|...+ ..+|.+........+.+|+.+.|.|.+.+.++..+.+.|++++..
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECSSC--CBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEecCC--CCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 999999999999998865444445677776422 124555443333446789999999999987442268999999875
Q ss_pred eccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 207 IKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
+........ ...+..+...+.|.|.++..+| |.|+|.|.|..+..
T Consensus 163 ~~~~~~~~~--~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 163 SGVHTFPAV--LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp TTEEECCCE--ECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred CceeECCCe--ECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 421111000 1122223344689999998888 99999999987753
No 120
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.91 E-value=2.4e-23 Score=158.46 Aligned_cols=165 Identities=16% Similarity=0.210 Sum_probs=126.9
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCe-eEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPW-TSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.+...|....+.+|++++|.|.+.+.|.+. +.|++++..+.. ....|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~n 75 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTNL 75 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECSS
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEeeC
Confidence 578888888888899999999999998887766 789999987653 224699999999999999999987
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
..+ ...+.|.|... +.+.. .....+.+|+.+.|.|.+.+.++. +.+.|++++..+... .
T Consensus 76 ~~~--s~~~~l~V~~~------~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~-~~~~W~k~g~~~~~~--------~--- 134 (175)
T 1fnl_A 76 STL--SDPVQLEVHIG------WLLLQ-APRWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKDRKYF--------H--- 134 (175)
T ss_dssp SCC--CCCEEEEEECS------SEEEE-CSCSEEETTCCEEEEEEECTTCCC-EEEEEEETTEEEEEE--------E---
T ss_pred Ccc--cccEEEEEeCC------Cceee-CCCceecCCCCEEEEEEcCCCCCc-eEEEEEECCeEccCC--------C---
Confidence 544 34456666643 22222 234568899999999999887763 599999999887421 1
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCc-EEeEEEEEE
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGE-VVTSACLIV 262 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v 262 (325)
....|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 135 ---~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 172 (175)
T 1fnl_A 135 ---HNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172 (175)
T ss_dssp ---ECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ---CCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEE
Confidence 1247999999999999999999997553 344555555
No 121
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.91 E-value=8.3e-25 Score=177.95 Aligned_cols=212 Identities=16% Similarity=0.157 Sum_probs=149.1
Q ss_pred eeeecccCCCCcccCCCCCCCCCCCCCccc---CCCCCCC--cccccccccccc-----cccCC--CCeeEecCCceEec
Q psy1095 11 LSVKLTRPSGLMSGHSTPRSTPRSTPPRSI---SPLSSRT--FTPYSLNSAIRT-----RRLTS--SPRFYAVPHNKICD 78 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v---~~~d~G~--Y~c~~~~~~~~~-----~~~~~--~p~~~~~~~~~~v~ 78 (325)
+.++|.+++..+... .......+.|..+ +.+|+|. |+|.+.+..+.. ..+.. +|.+. +....+.
T Consensus 36 ~~v~W~k~~~~l~~~--~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~--~~~~~v~ 111 (265)
T 2oz4_A 36 AQVHLALGDQRLNPT--VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVI--LTKPEVS 111 (265)
T ss_dssp CEEEEEETTEECCCE--EEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEE--ESCSEEE
T ss_pred eEEEEEeCCEECCce--EeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceee--cCCceec
Confidence 367787777666542 2222345666655 8889885 999998764432 22322 34444 3455688
Q ss_pred CCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe-CCeeEE---EEEEEE
Q psy1095 79 LGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN-NYGSVE---ATARLE 154 (325)
Q Consensus 79 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~-~~~~~~---~~~~l~ 154 (325)
+|+.+.|.|.+. |.+.++| +|..+... +....|.|..+..+|.|.|+|.+.| ..|... ..+.|.
T Consensus 112 ~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~ 179 (265)
T 2oz4_A 112 EGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELR 179 (265)
T ss_dssp TTCEEEEEEECC--TTSEEEE--SSCSSSCC--------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred CCCcEEEEEEcc--CCCEEEE--CCEEccCC--------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEE
Confidence 899999999987 8899999 77776322 1234588889999999999999975 335433 567777
Q ss_pred EECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCC
Q psy1095 155 IMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPH 234 (325)
Q Consensus 155 v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 234 (325)
|..++.. .....+....+.+|+.+.|.|.+.|.|. +.+.|++++..+.. .+ .+. .
T Consensus 180 V~~~p~~----~~~~~p~~~~v~~g~~~~l~C~~~g~P~--p~i~W~~~~~~~~~----------~g-------~~~--~ 234 (265)
T 2oz4_A 180 VLYGPRL----DERDCPGNWTWPENSQQTPMCQAWGNPL--PELKCLKDGTFPLP----------IG-------ESV--T 234 (265)
T ss_dssp EEEEEEC----CGGGSCSEEEEETTCEECCCCCCEEESC--CEEEEEETTTEECC----------TT-------SCE--E
T ss_pred EEeCCcc----ccccCCCccEEcCCCeEEEEeECccCCC--CeEEEEECCcccCC----------CC-------cEE--E
Confidence 7765322 1111233557889999999999999998 89999999873221 11 111 3
Q ss_pred CCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 235 VYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 235 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 235 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 235 VTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 77899999999999999999988888885
No 122
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.91 E-value=6e-24 Score=164.84 Aligned_cols=175 Identities=15% Similarity=0.139 Sum_probs=115.7
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|++..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 57888888875 7889999999999987665 8999999987643211 0011234578999999999999999999987
Q ss_pred CeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 144 YGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 144 ~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
.+.. ...+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|++..+......... ...
T Consensus 81 ~g~~~~s~~~~l~V~~~~---~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p---~~~~W~k~g~~~~~~~~~~~~-~~~- 151 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFY---NKPTLSALP-SPVVTSGENVTLQCGSRLRF---DRFILTEEGDHKLSWTLDSQL-TPS- 151 (196)
T ss_dssp TEECBCCCCEEEEEECSS---CCCEEEC------------CEEEEEESSCC---SEEEEEEC---CCEEEEECEE-CTT-
T ss_pred CCcCCcCccEEEEecCCC---CCCeEEccC-CccccCCCcEEEEEEcCCCC---CEEEEEccCCccccccccccc-ccC-
Confidence 6633 345667776631 235554433 34688999999999998765 589999998876421110000 000
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
......|.|.+++.+|+|.|+|.|.|..+
T Consensus 152 --~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 152 --GQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp --SCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred --CCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 01346899999999999999999999764
No 123
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.91 E-value=9.6e-24 Score=165.92 Aligned_cols=184 Identities=15% Similarity=0.171 Sum_probs=129.6
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCe--eC------------CCCCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGK--PA------------TPNARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
+...|....+.+|+++.|.|.+.+.|.+.+.|+|++. .+ ....++.........+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 4566788889999999999999998888999998532 11 112466666556667899999999999
Q ss_pred eEEEEEEEeCCeeEE-EEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCC
Q psy1095 134 GLYTIKVENNYGSVE-ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSD 212 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~ 212 (325)
|.|+|.+.+..+... ....|.|... ..+|.+........+..|+.+.|.|.+.+.+++...+.|++++..+.....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 160 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 160 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecC---CCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceee
Confidence 999999988765432 2345666543 124666554444444579999999999885443248999999998765410
Q ss_pred CceEEE-ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 213 MKPEVQ-VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 213 ~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
...... ..+..+...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 161 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred ecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 000000 111122345689999999999999999999987654
No 124
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.91 E-value=1.6e-23 Score=164.34 Aligned_cols=183 Identities=15% Similarity=0.180 Sum_probs=127.7
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
+.. |....+.+|++++|.|.+.+.|.+.+.|+++. ..+ ....++.+...+....|.|.+++.+|+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 444 77888999999999999998888899999842 221 112466665555667899999999999
Q ss_pred eEEEEEEEeCCeeEE-EEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC-C
Q psy1095 134 GLYTIKVENNYGSVE-ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD-S 211 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~-~ 211 (325)
|.|.|.+.+..+... ....|.|... ..+|.+........+..|+.++|.|.+.+.+++.+.+.|+++|..+... .
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 159 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKRA---DAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVL 159 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEE
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcCC---CcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCce
Confidence 999999988765332 2345666543 1246665544443345799999999999855432489999999987644 1
Q ss_pred CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 212 DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
.........+..+...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 160 DSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 0000000111223345689999999999999999999976543
No 125
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.91 E-value=1.5e-23 Score=164.57 Aligned_cols=186 Identities=14% Similarity=0.232 Sum_probs=132.3
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeC--CeeCC------------CCCcEEEEecCCeEEEEEccCCCCC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKD--GKPAT------------PNARVTIREKEDLRFLEISEVTLED 132 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d 132 (325)
.+...| ...+.+|++++|.|.+. +.+.+.|+|+ +.... ...++.........+|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 79 (211)
T 3tv3_L 3 ALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDD 79 (211)
T ss_dssp CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGG
T ss_pred eEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhH
Confidence 344445 77899999999999998 8889999984 22211 2346665555667789999999999
Q ss_pred CeEEEEEEEeCCe--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC
Q psy1095 133 AGLYTIKVENNYG--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD 210 (325)
Q Consensus 133 ~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~ 210 (325)
+|.|+|.+.+..+ .......|.|...+ ..+|.+...+....+..|+.+.|.|.+.+.+++.+.+.|+++|..+...
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~--~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 157 (211)
T 3tv3_L 80 EAVYYCGSLVGNWDVIFGGGTKLTVLGQP--KAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAG 157 (211)
T ss_dssp CEEEEEEEEETTTEEEECCCEEEEECCSC--CBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred CEEEEEEEecCCCceeECCCceEEEeCCC--CcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCC
Confidence 9999999998776 33445667776322 2356666555444455799999999999875433899999999988642
Q ss_pred CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE
Q psy1095 211 SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 257 (325)
..........+..+...+.|.|.++..+|.|.|+|.|.|..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~ 204 (211)
T 3tv3_L 158 VETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 204 (211)
T ss_dssp EEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEE
T ss_pred cccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEee
Confidence 21111111222333455789999999999999999999988655444
No 126
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.91 E-value=2.3e-23 Score=163.78 Aligned_cols=178 Identities=15% Similarity=0.196 Sum_probs=129.4
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCCCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~ 131 (325)
|.+...|....+.+|++++|.|.+.+.|.+.+.|+|+. ... ....++.....+...+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 46677788889999999999999998889999999842 111 1134666666666778999999999
Q ss_pred CCeEEEEEEEeCCe---eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEe-cCCCCCeeEEeeCCEEe
Q psy1095 132 DAGLYTIKVENNYG---SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQV-VPPNDHDISWFRNNRLI 207 (325)
Q Consensus 132 d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~~~~W~~~~~~~ 207 (325)
|+|.|+|.+.+..+ .......|.|... ..+|.+........+..|+.++|.|.+.+ .|. +.+.|++++..+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~--~~v~W~k~g~~~ 156 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGD---PVAPTVLIFPPSADLVATGTVTIVCVANKYFPD--VTVTWEVDGTTQ 156 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECC---CBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSC--CEEEEEETTEEC
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCC---CcCCeEEEeCCchhhccCCcEeEEEEEecccCC--cEEEEEeCCccC
Confidence 99999999988655 3334455666542 24566665555555667999999999998 675 899999999887
Q ss_pred ccCCCCceE-EEecCCcceeEEEEEeCCCCCCCCeEEEEEEE
Q psy1095 208 KLDSDMKPE-VQVDSKENLVIARLKIPHVYPEDEGEFTCRVA 248 (325)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 248 (325)
......... ....+..+...+.|.|.++..+|.|.|+|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 157 TTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 532100000 00111223345789999999999999999998
No 127
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.91 E-value=7.9e-24 Score=166.29 Aligned_cols=179 Identities=17% Similarity=0.242 Sum_probs=129.0
Q ss_pred EecCCceEecCCCeEEEEEEEEecC----CCeeEEee----------------CCeeCCC-----CCcEEEEe---cCCe
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP----APWTSWSK----------------DGKPATP-----NARVTIRE---KEDL 120 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p----~~~v~W~~----------------~~~~~~~-----~~~~~~~~---~~~~ 120 (325)
...+..+.+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.. ..+..+.. ..+.
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 3445567789999999999998766 46899998 3333321 23443322 1234
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeE
Q psy1095 121 RFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDIS 199 (325)
Q Consensus 121 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~ 199 (325)
.+|.|.+++.+|+|.|+|.+.+..+.....+.|.|...+.. +.. .....+..|+.+.|.|.+ .+.|. +.+.
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~---~~~---~~~~~~~~g~~v~l~C~~~~g~p~--~~v~ 155 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSG---TRC---FVDGSEEIGNDFKLKCEPKEGSLP--LQFE 155 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBS---CEE---EEESCCBTTCCEEEEEECSBCCSS--CEEE
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCC---cee---eeecceecCCcEEEEecCCCCCCC--CEEE
Confidence 67999999999999999999999888888888999876432 222 222346789999999999 77777 8999
Q ss_pred EeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 200 WFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 200 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|++++............ .. ...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 156 W~~~~~~~~~~~~~~~~--~~------~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 156 WQKLSDSQTMPTPWLAE--MT------SPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp EEECSTTCCCCGGGGGG--TT------SSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred EEECCCCCccCccceec--cC------CCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 99954322221111100 11 1389999999999999999999999999888888773
No 128
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.91 E-value=8.5e-24 Score=164.29 Aligned_cols=175 Identities=17% Similarity=0.199 Sum_probs=120.5
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|++..+....... ........|.|.+++..|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 57888888874 7899999999999988765 699999988663111000 00112346999999999999999999987
Q ss_pred C-e--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec
Q psy1095 144 Y-G--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 144 ~-~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
. + .....+.|.|...+ .+|.+...+ ...+.+|+.++|.|.+.+. + +.+.|++++..+.............
T Consensus 81 ~~g~~~~s~~~~l~V~~~~---~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~--~~v~W~k~g~~~~~~~~~~~~~~~~ 153 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGAY---IKPTLSAQP-SPVVNSGGNVTLQCDSQVA-F--DGFILCKEGEDEHPQCLNSQPHARG 153 (198)
T ss_dssp TTEECCCCCCEEEEEECSS---CCCEEEEES-CSEEETTCCEEEEEECSSC-C--SEEEEEEC------CEEEC------
T ss_pred CCCcccCCccEEEEEcccc---cCCccccCC-ccccCCCCcEEEEEecCCC-C--cEEEEEECCCccCCccccccccCCC
Confidence 6 5 23455677777631 235554443 3578899999999999877 4 7999999988764321100000001
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
+ ....|.|.+++.+|+|.|+|.|.|..+
T Consensus 154 ~----~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 154 S----SRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp C----CEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred c----ceeEEEecccCcccCeEEEEEEEeCCC
Confidence 0 236899999999999999999999865
No 129
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=5.7e-23 Score=179.54 Aligned_cols=180 Identities=16% Similarity=0.251 Sum_probs=120.6
Q ss_pred EecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeCC-----------------CCCcEEEEec--CCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPAT-----------------PNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i 125 (325)
+..|....+.+|++++|.|.+.+.+ .+.+.|||+. ..+. ...++.+..+ .+..+|.|
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (444)
T 1igt_B 4 LQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQM 83 (444)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEE
Confidence 3456677899999999999998764 5789999852 2110 1235655442 34678999
Q ss_pred ccCCCCCCeEEEEEEEeCCee---EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCCeeEEe
Q psy1095 126 SEVTLEDAGLYTIKVENNYGS---VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDHDISWF 201 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~~~~W~ 201 (325)
.+++.+|+|.|.|.+.+..+. ......|.|.... ..+|.+........+.+|+.+.|.|.+.+. |.+ ..+.|+
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~ 160 (444)
T 1igt_B 84 SRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK--TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEP-VTLTWN 160 (444)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC--CBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSC-CEEEEG
T ss_pred CCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCC--CCCCceeEecccccCCCCCcEEEEEEEcceeCCC-cEEEEe
Confidence 999999999999999886543 2223566665321 123544433333345789999999999986 441 499999
Q ss_pred eCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 202 RNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
+++..+......... .. ..+...+.|.|.++..+| |.|+|.|.|..+...
T Consensus 161 ~~~~~~~~~~~~~~~--~~-~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~ 210 (444)
T 1igt_B 161 SGSLSSGVHTFPAVL--QS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 210 (444)
T ss_dssp GGTBCTTEEECCCEE--ET-TEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE
T ss_pred cCCCCCCeEecCccc--cC-CcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc
Confidence 988753211110100 11 222334679999999999 999999999887643
No 130
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.90 E-value=1.9e-22 Score=154.68 Aligned_cols=168 Identities=20% Similarity=0.345 Sum_probs=123.2
Q ss_pred eEecCCCeEEEEEEEEecCCC--eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy1095 75 KICDLGDTVRFQCSVTGQPAP--WTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATAR 152 (325)
Q Consensus 75 ~~v~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 152 (325)
..+.+|+++.|.|.+.+.|.| .+.|++++..+...... .....|.|. +.+|+|.|+|.+.+.. ...+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTT---SCEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCc---CcEEE
Confidence 347889999999999887766 89999999887654321 123346665 6899999999999733 24566
Q ss_pred EEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee---CCEE-eccCCCCceEEEecCCcceeEE
Q psy1095 153 LEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR---NNRL-IKLDSDMKPEVQVDSKENLVIA 228 (325)
Q Consensus 153 l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (325)
|.|..+ |.+...+....+.+|+.+.|.|.+.+.|+. +.+.|++ ++.. +......+......+ ..+
T Consensus 78 l~V~~~------P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 146 (184)
T 3b5h_A 78 IQLHGP------PRVKAVKSSEHINEGETAMLVCKSESVPPV-TDWAWYKITDSEDKALMNGSESRFFVSSSQ----GRS 146 (184)
T ss_dssp EEECCS------CCCEESCSEEEECTTSCEEEEEECCCSSCC-CEEEEEECCSSSCEECCTTGGGTEEEEEET----TEE
T ss_pred EEEecC------CceeecCCCcEEcCCCcEEEEEEECCCCCC-CeEEEEEcCCCCCEEeecCCCCEEEEEecC----Cee
Confidence 777654 444554555678899999999999998822 8999999 4444 332221222222222 346
Q ss_pred EEEeCCCC-CCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 229 RLKIPHVY-PEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 229 ~l~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
.|.|.+++ .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 147 ~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 147 ELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 89999999 999999999999999998888888773
No 131
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.90 E-value=2.1e-23 Score=158.94 Aligned_cols=168 Identities=16% Similarity=0.193 Sum_probs=125.1
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCC-eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAP-WTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.+...|....+.+|++++|.|.+.+.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.+
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCC
Confidence 57888888888889999999999999887765 69999999887642 24699999999999999999987
Q ss_pred CCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 143 NYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
..+. ..+.|.|... +.+.. .....+.+|+.+.|.|.+.+.++. +.+.|++++..+.....
T Consensus 73 ~~~s--~~~~l~V~~~------~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~~~~~~~---------- 132 (176)
T 1f2q_A 73 VNES--EPVYLEVFSD------WLLLQ-ASAEVVMEGQPLFLRCHGWRNWDV-YKVIYYKDGEALKYWYE---------- 132 (176)
T ss_dssp SSCC--CCEEEEEECS------SEEEE-ESCSEEETTSCEEEEEEEGGGCCE-EEEEEEETTEECCSCCC----------
T ss_pred cccc--ccEEEEEeCc------ceeec-CCcceeeCCCCEEEEEEecCCCCc-eEEEEEECCEEEeeecC----------
Confidence 5543 3455666532 22222 234578899999999999654442 79999999988753221
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCc-EEeEEEEEEEee
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGE-VVTSACLIVDVV 265 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~ 265 (325)
...|.|.+++.+|+|.|+|.|.|..+. ....+.|.|...
T Consensus 133 ----~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 172 (176)
T 1f2q_A 133 ----NHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKA 172 (176)
T ss_dssp ----SSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECS
T ss_pred ----CCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecC
Confidence 137999999999999999999996443 334466776443
No 132
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.90 E-value=5.8e-24 Score=166.47 Aligned_cols=183 Identities=21% Similarity=0.332 Sum_probs=132.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC------------CCCCcEEEEecCCeEEEEEccCCCC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA------------TPNARVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~ 131 (325)
.++.+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.... ..|.|.+++.+
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~ 78 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRE 78 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTT
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHH
Confidence 3566777788888999999999999999899999999987542 1123333332 46999999999
Q ss_pred CCeEEEEEEEeCCe--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeEEeeCCEEec
Q psy1095 132 DAGLYTIKVENNYG--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDISWFRNNRLIK 208 (325)
Q Consensus 132 d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~W~~~~~~~~ 208 (325)
|+|.|+|.+.+..+ .....+.|.|..++.. ........+..|+.+.|.|.+ .+.|. +.+.|++++..+.
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~------~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~v~W~~~~~~~~ 150 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSK------PTVNIPSSATIGNRAVLTCSEQDGSPP--SEYTWFKDGIVMP 150 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBCCCC------CCCCCBSEEETTSCEEECCCCCSCBSC--CEEEEEETTCCCC
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecCCcC------CCcccccceecCCEEEEEEeCCCCCCC--ceeEEEECCeeCC
Confidence 99999999998754 3445677777765432 222234568899999999997 78887 8999999998876
Q ss_pred cCCCCceEEEecC-CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEE
Q psy1095 209 LDSDMKPEVQVDS-KENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSA 258 (325)
Q Consensus 209 ~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 258 (325)
............. ........|.|.+++.+|+|.|+|.|.|..|....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 151 TNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp SCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECC
T ss_pred CccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccc
Confidence 5432210000000 0000125799999999999999999999999874433
No 133
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.90 E-value=1.3e-22 Score=159.40 Aligned_cols=185 Identities=15% Similarity=0.201 Sum_probs=128.8
Q ss_pred eEecCCceEecCCCeEEEEEEEEecC---CCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQP---APWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVTL 130 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p---~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~ 130 (325)
+.. |....+.+|++++|.|.+.+.| .+.+.|++++ ..+ ....++.....+....|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 445 7888899999999999998876 4789999853 221 113466655555667899999999
Q ss_pred CCCeEEEEEEEeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEecc
Q psy1095 131 EDAGLYTIKVENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKL 209 (325)
Q Consensus 131 ~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~ 209 (325)
+|+|.|.|.+.+..+.. .....|.|...+ ..+|.+........+..|+.++|.|.+.+.+++...+.|++++..+..
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 160 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQP--KSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA 160 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCSC--CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecCC--CCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC
Confidence 99999999999876532 233456664322 134666554444444568999999999987653248999999998865
Q ss_pred CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 210 DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
+..........+..+...+.|.|..+..+|.|.|+|.|.|......
T Consensus 161 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 161 GMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred CeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 4211111111222334456899999999999999999999865543
No 134
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.90 E-value=5e-22 Score=170.50 Aligned_cols=262 Identities=14% Similarity=0.131 Sum_probs=178.3
Q ss_pred CCCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA 106 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~ 106 (325)
..+|.|.+++.+|+|.|+|.+.+..+.. +.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 62 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l 141 (389)
T 2jll_A 62 SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVL 141 (389)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEES
T ss_pred cceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccC
Confidence 3478999999999999999998765532 34446777766666557899999999999999999999999999998
Q ss_pred CCCC--cEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEE
Q psy1095 107 TPNA--RVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTF 184 (325)
Q Consensus 107 ~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l 184 (325)
.... ++.+...+....|.|.++...|+|.|+|.+.|..|.......+.+...|. +|... ......+..+.|
T Consensus 142 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~---~P~~~----~~~~~~~~~~~l 214 (389)
T 2jll_A 142 PAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPS---SPYGV----KIIELSQTTAKV 214 (389)
T ss_dssp SCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCC---CCEEE----EEEEECSSCEEE
T ss_pred CcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCC---CCcce----EEeeccCCEEEE
Confidence 7653 56666666667899999999999999999999999887777777755432 23211 111234577899
Q ss_pred EEEEEec----CCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEE--
Q psy1095 185 ECQVQVV----PPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSA-- 258 (325)
Q Consensus 185 ~C~~~~~----~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~-- 258 (325)
.|..... +.....+.|.+++..... .....+ ....+.|.++...+.+.|+|.|.|..|....+.
T Consensus 215 ~w~~p~~~~g~pi~~y~v~~~~~~~~~~~------~~~~~~----~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~ 284 (389)
T 2jll_A 215 SFNKPDSHGGVPIHHYQVDVKEVASEIWK------IVRSHG----VQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIE 284 (389)
T ss_dssp EEECCSCCTTSCEEEEEEEEEETTCSCCE------EEECST----TCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCE
T ss_pred EEeCCCCCCCcceEEEEEEEEECCCcccE------EeeccC----CcceEEECCccCCCEEEEEEEEEcCCccCCCCcce
Confidence 9975321 110135778776542110 000111 124799999999999999999999887543322
Q ss_pred -------------------------EEEEEeeCCeecCCCC---ceEEEE--------------eCCEEEEEEcCCCCCC
Q psy1095 259 -------------------------CLIVDVVKGKDLTSDG---RLNIIT--------------VGGTSVLTIEDITGDD 296 (325)
Q Consensus 259 -------------------------~l~v~~~~~~~~~~~~---~~~~~~--------------~~~~~~l~i~~v~~~d 296 (325)
.|.|. .+. ..++ .+.+.. ......+.|.++....
T Consensus 285 ~~~t~~~~~p~~p~~~~~~~~~~~v~l~W~-~p~---~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t 360 (389)
T 2jll_A 285 IFQTLPVREPSPPSIHGQPSSGKSFKLSIT-KQD---DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTM 360 (389)
T ss_dssp EEECCCCCCCCCCCEEEEEETTTEEEEEEC-CCC---CCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTC
T ss_pred EEEecCCCCCCCCccccccCcCCEEEEEEE-CCC---CCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCC
Confidence 22221 000 0011 111111 1122357888888888
Q ss_pred CeEEEEEEECCCeeEEeE
Q psy1095 297 SGKYQVHVSNQHGSDSCY 314 (325)
Q Consensus 297 ~G~Y~C~a~n~~g~~~~~ 314 (325)
...|+..|.|..|....+
T Consensus 361 ~Y~~~V~A~n~~G~s~~s 378 (389)
T 2jll_A 361 GYEVQITAANRLGYSEPT 378 (389)
T ss_dssp EEEEEEEEEC-CCBCCCE
T ss_pred EEEEEEEEEcCCcCCCce
Confidence 889999999999976554
No 135
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.90 E-value=2.5e-24 Score=181.77 Aligned_cols=219 Identities=13% Similarity=0.182 Sum_probs=137.9
Q ss_pred CCCCCcccCCCCCCCcccccccccc-----cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CC-CeeEEee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI-----RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA-PWTSWSK 101 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~-----~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~v~W~~ 101 (325)
.+|.|.+++++|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.|. |. +.+.|++
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 158 (344)
T 1za6_B 79 AYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 158 (344)
T ss_dssp EEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETT
T ss_pred EEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEec
Confidence 4789999999999999999987421 112222 35666554444456799999999999886 65 7999999
Q ss_pred CCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEEC------------------CC
Q psy1095 102 DGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMD------------------PR 159 (325)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~------------------~~ 159 (325)
++..+...........++ ...|.|.++..+| |.|+|.+.|..+.......+.+.. ..
T Consensus 159 ~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 237 (344)
T 1za6_B 159 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSG 237 (344)
T ss_dssp TTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC-------------------
T ss_pred CCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccC
Confidence 987642110000001111 1358898888878 999999998876533222221100 00
Q ss_pred cccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCC
Q psy1095 160 AIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPED 239 (325)
Q Consensus 160 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 239 (325)
....+|.+...........|..+.|.|.+.|++++.+.+.|+++|..+......... ...+..+...+.|.|.....+|
T Consensus 238 ~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~-~~~~g~~~~~s~l~i~~~~~~~ 316 (344)
T 1za6_B 238 GQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV-LDSDGSFFLYSKLTVDKSRWQQ 316 (344)
T ss_dssp -CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCE-ECTTSCEEEEEEEEECHHHHHT
T ss_pred CCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceE-ECCCCcEEEEEEEEEChHHccC
Confidence 112345554433322233467799999999965533789999999877532211111 1112223345678888777788
Q ss_pred CeEEEEEEEeCCCc
Q psy1095 240 EGEFTCRVANELGE 253 (325)
Q Consensus 240 ~G~Y~C~~~~~~~~ 253 (325)
.|.|+|.|.|....
T Consensus 317 ~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 317 GNVFSCSVMHEALH 330 (344)
T ss_dssp TCEEEEEEECTTST
T ss_pred CCeEEEEEEcCCCC
Confidence 99999999997653
No 136
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.90 E-value=5.9e-23 Score=161.36 Aligned_cols=185 Identities=18% Similarity=0.258 Sum_probs=131.9
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC---ee-----------CCCCCcEEEEecCCeEEEEEccCCCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG---KP-----------ATPNARVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~---~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~ 131 (325)
|.+...|....+.+|++++|.|.+.+.|.+.+.|+|.. .. .....++.........+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 56677788889999999999999998888999999832 10 01234666665566778999999999
Q ss_pred CCeEEEEEEEeCCe-eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC
Q psy1095 132 DAGLYTIKVENNYG-SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD 210 (325)
Q Consensus 132 d~G~Y~C~~~~~~~-~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~ 210 (325)
|+|.|+|.+.+..+ .......|.|... ..+|.+...+....+..|+.+.|.|.+.+.+++.+.+.|++++..+...
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRA---DAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCEEEEEecccCCceEEcCCceEEEecc---CCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 99999999987654 2233455666332 2456666655555556788899999999876533689999999988643
Q ss_pred C-CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 211 S-DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 211 ~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
. ............+...+.|.|.....+|.|.|+|.|.|....
T Consensus 159 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 159 VLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred eEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 1 000000011223344568999998889999999999997644
No 137
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.90 E-value=4.2e-23 Score=162.55 Aligned_cols=170 Identities=15% Similarity=0.124 Sum_probs=122.0
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeE--EEEEccCCCCCCeEEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLR--FLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~ 140 (325)
..+|.|...|. ..+.+|++|+|.|.+.+ +.+.+.|+|++..+..... ......... .|.|.+++.+|+|.|+|.+
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 46788888887 47899999999999876 6789999998865532111 111111223 7999999999999999999
Q ss_pred EeCCeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEE
Q psy1095 141 ENNYGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQ 218 (325)
Q Consensus 141 ~~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 218 (325)
.|..+.. ...+.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+.+. +.+.|+|+|..+... ..
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~---~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~--~~~~W~k~g~~~~~~----~~-- 151 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGL---YGKPFLSADR-GLVLMPGENISLTCSSAHIPF--DRFSLAKEGELSLPQ----HQ-- 151 (218)
T ss_dssp EETTTEEEECCCEEEEEECS---SCCCEEEESS-CSEECTTCCCEEEEECSSSCC--SEEEEEETTCSSCCS----EE--
T ss_pred EcCCCceeecCCEEEEEcCc---ccCCEEEeCC-CCccCCCCCEEEEEeCCCCCC--CEEEEEECCCccccc----cc--
Confidence 9875432 33466777653 1345655444 457889999999997655555 789999998866431 11
Q ss_pred ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 219 VDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 219 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
... ....|.|.+++.+|+|.|+|.|.|..
T Consensus 152 ~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 152 SGE----HPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp ECS----SSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCC----ccCEEEEccCCcccCEEEEEEEEcCC
Confidence 111 12689999999999999999999864
No 138
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.90 E-value=3.1e-23 Score=159.15 Aligned_cols=161 Identities=16% Similarity=0.207 Sum_probs=121.4
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|++... . .....|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~--~~~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------Y--QDQAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------E--ESSSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------c--CcccEEEECcCChhhCceEEEEEEc
Confidence 367888888875 7899999999999877 77899999998651 1 1224699999999999999999999
Q ss_pred CCeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec
Q psy1095 143 NYGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 143 ~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
..+.. ...+.|.|... ..+|.+...+ ...+.+|+.+.|.|.+.+. + +.+.|++++..+...... .
T Consensus 74 ~~g~~~~s~~~~l~V~~~---~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~--~~~~w~k~g~~~~~~~~~--~---- 140 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATGV---FAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-F--DQFALYKEGDPAPYKNPE--R---- 140 (184)
T ss_dssp TTEEBCCCCCEEEEEESS---SCCCEEEEEC-CCSSCCTTCEEEEEECSSC-C--CEEEEEECCCCTTSCCCC--E----
T ss_pred CCCccCCCCCEEEEecCc---CCCCEEEeCC-CceecCCCcEEEEEEcCCC-C--cEEEEEECCCcCcceecC--C----
Confidence 77532 34466777543 1345665544 4567789999999997643 3 689999999876542211 0
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
.....|.|.+++.+|+|.|+|.|.|..+
T Consensus 141 ----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 141 ----WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp ----EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred ----CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 1235799999999999999999999754
No 139
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.90 E-value=6.3e-23 Score=165.24 Aligned_cols=187 Identities=18% Similarity=0.232 Sum_probs=125.5
Q ss_pred eEecCCceEecCCCeEEEEEEEEe---cCCCeeEEeeCCeeCC------------------------------CCCcEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTG---QPAPWTSWSKDGKPAT------------------------------PNARVTI 114 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~---~p~~~v~W~~~~~~~~------------------------------~~~~~~~ 114 (325)
+..++.++.+.+|+++.|.|.+.+ .|.+.+.|++++.... ...+..+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 344555778999999999999987 7888999999875420 0112222
Q ss_pred EecCCeEEEEEccCCCCCCeEEEEEEEeCCee-----EEEEEEEEEECCCcccCCCeeee-cCcCeeEecCCcEEEEEEE
Q psy1095 115 REKEDLRFLEISEVTLEDAGLYTIKVENNYGS-----VEATARLEIMDPRAIISRPKVLN-GLENLRCCDGDSVTFECQV 188 (325)
Q Consensus 115 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~~p~~~~-~~~~~~v~~g~~v~l~C~~ 188 (325)
.. .+...|.|.+++.+|+|.|+|.+.+..+. ....+.|.|...+. +|.+.. .+....+.+|+.+.|.|.+
T Consensus 85 ~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~~~~~~~~~~v~~g~~v~L~C~~ 160 (250)
T 2fbo_J 85 AN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTP---SNNVHVSTAEVVQVDEGNDITMTCPC 160 (250)
T ss_dssp SC-TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSC---CSCCEECCCSEEECCTTCCEEECCCE
T ss_pred cc-CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCC---CCeEEEecCceEEecCCCcEEEEEEe
Confidence 11 12346999999999999999999987653 24577788876421 122222 2334566779999999999
Q ss_pred EecCCCCCeeEEeeCCEEeccCCCCceEEE-----------ecC-Ccce---eEEEEEeCCCCCCCCeEEEEEEEeCCC-
Q psy1095 189 QVVPPNDHDISWFRNNRLIKLDSDMKPEVQ-----------VDS-KENL---VIARLKIPHVYPEDEGEFTCRVANELG- 252 (325)
Q Consensus 189 ~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-----------~~~-~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~- 252 (325)
.+.|. +.+.|++++..+........... ... .... ....|.|.+++.+|+|.|+|.|.|..|
T Consensus 161 ~g~p~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 161 TDCAN--ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp ESCTT--CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred cCCCC--CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence 99888 79999999887654221100000 000 0000 114899999999999999999999554
Q ss_pred --cEEeEEEE
Q psy1095 253 --EVVTSACL 260 (325)
Q Consensus 253 --~~~~~~~l 260 (325)
.....+.|
T Consensus 239 ~g~~~~~~~l 248 (250)
T 2fbo_J 239 LDADRSSTIL 248 (250)
T ss_dssp GGEEEEEEEE
T ss_pred cCccceeEEE
Confidence 44444444
No 140
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.90 E-value=1e-22 Score=160.61 Aligned_cols=188 Identities=18% Similarity=0.277 Sum_probs=127.4
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCC--ee-------------C---CCCCcEEEEecCCeEEEEEc
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDG--KP-------------A---TPNARVTIREKEDLRFLEIS 126 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~--~~-------------~---~~~~~~~~~~~~~~~~l~i~ 126 (325)
|.+...| ...+.+|++++|.|.+.+. |.+.+.|+|.. .. . ....++.+.......+|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 4556666 7889999999999999988 88999999832 10 0 01135555555566789999
Q ss_pred cCCCCCCeEEEEEEEeCCe-----eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEe
Q psy1095 127 EVTLEDAGLYTIKVENNYG-----SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWF 201 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~ 201 (325)
+++.+|+|.|.|.+.+..+ .......|.|...+. .+|.+........+..|+.+.|.|.+.+.++....+.|+
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~--~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~ 158 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPK--STPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWK 158 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCC--CCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEE
Confidence 9999999999999987654 233356777775421 346665544444556788999999999854331489999
Q ss_pred eCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE
Q psy1095 202 RNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 257 (325)
+++..+............ +..+...+.|.|.....+|.|.|+|.|.|..+.....
T Consensus 159 k~g~~l~~~~~~~~~~~~-~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 159 ANGTPITQGVDTSNPTKE-GNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp ETTEEC---------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred ECCEECcCceecCccccc-CCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 999988653221111111 2222334568899888889999999999988755443
No 141
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.90 E-value=8e-22 Score=156.40 Aligned_cols=178 Identities=13% Similarity=0.169 Sum_probs=117.8
Q ss_pred cCCceEecCCCeEEEEEEEEecCCC---eeEEeeCCeeC-----------CC------CCcEEEEe---cCCeEEEEEcc
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQPAP---WTSWSKDGKPA-----------TP------NARVTIRE---KEDLRFLEISE 127 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~~~~~~~-----------~~------~~~~~~~~---~~~~~~l~i~~ 127 (325)
++.++.+.+|++++|.|.+.+.+.+ .|.|+|++... .. ..+..... ..+..+|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 3446778999999999999875543 68999875321 00 11222222 13457899999
Q ss_pred CCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCCeeEEeeCCEE
Q psy1095 128 VTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDHDISWFRNNRL 206 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~~~~W~~~~~~ 206 (325)
++.+|+|.|+|.+.|..+.....+.+.+..... .......+.+|+.+.|.|.+.+. |. +.+.|++++..
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~g~~v~l~c~~~g~~P~--p~i~W~k~~~~ 159 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVAALGS--------DLHVDVKGYKDGGIHLECRSTGWYPQ--PQIQWSNNKGE 159 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCC--------CCEEEEEEEETTEEEEEEEEEEEBSC--CEEEEECTTSC
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeecccee--------cccceeeeccCCceeeEEEeccCCCC--CEEEEEECCce
Confidence 999999999999999888777666655543311 11123457789999999999985 66 89999997654
Q ss_pred eccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 207 IKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
+............++ ....+.+..++.+|.|.|+|.|.|..+.....+.|.|
T Consensus 160 ~~~~~~~~~~~~~~g----~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 160 NIPTVEAPVVADGVG----LYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp BCCCEECCCEECTTS----CEEEEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred EcCCCceEEEECCCC----cEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 433222222211111 1233444456789999999999999999988888876
No 142
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.89 E-value=1.1e-22 Score=168.67 Aligned_cols=218 Identities=16% Similarity=0.217 Sum_probs=152.8
Q ss_pred eeeecccCCCCcccCCCC------CCCCCCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeEe-----cCCc
Q psy1095 11 LSVKLTRPSGLMSGHSTP------RSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFYA-----VPHN 74 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~~-----~~~~ 74 (325)
..+.|.+++..+...... .....+|.|.+++.+|+|.|+|.+.+..+.. +.+..+|.+.. .+..
T Consensus 34 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~ 113 (305)
T 2nzi_A 34 PIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGA 113 (305)
T ss_dssp CEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCC
T ss_pred CeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCcccccccc
Confidence 356777766555432110 1112378999999999999999998765432 23333443322 2345
Q ss_pred eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEcc-CCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy1095 75 KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISE-VTLEDAGLYTIKVENNYGSVEATARL 153 (325)
Q Consensus 75 ~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l 153 (325)
..+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.+ +...|.|.|+|.+.|..|.....+.|
T Consensus 114 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 193 (305)
T 2nzi_A 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVEL 193 (305)
T ss_dssp EEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEE
Confidence 67889999999999999999999999999998877777777666778899999 99999999999999999998888889
Q ss_pred EEECCCcccCCCeeeecCcCeeEecCCcEEEE--------------EEEEecCCCCCeeEEeeCCEEeccCCCCceEEEe
Q psy1095 154 EIMDPRAIISRPKVLNGLENLRCCDGDSVTFE--------------CQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQV 219 (325)
Q Consensus 154 ~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~--------------C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 219 (325)
.|...|.. |..... ....+..+.|. |.+...+. ....|.+.+...
T Consensus 194 ~v~~~P~~---p~~~~~----~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~--~~~~w~~~~~~~------------ 252 (305)
T 2nzi_A 194 DVADVPDP---PRGVKV----SDVSRDSVNLTWTEPASDGGSKITNYIVEKCAT--TAERWLRVGQAR------------ 252 (305)
T ss_dssp EEEBCCCC---CEEEEE----ESCCSSCEEEEEECCSCCSBSCEEEEEEEEEET--TSCCEEEEEEES------------
T ss_pred EEecCCCC---CCCcee----eeccCCEEEEEEcCCccCCCCceeEEEEEEecC--CCCccEECcccc------------
Confidence 98876432 221110 01123344444 44444333 334555433221
Q ss_pred cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe
Q psy1095 220 DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT 256 (325)
Q Consensus 220 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 256 (325)
...|.|.++...+.|.|+|.|.|..|....
T Consensus 253 -------~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~ 282 (305)
T 2nzi_A 253 -------ETRYTVINLFGKTSYQFRVIAENKFGLSKP 282 (305)
T ss_dssp -------SSEEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred -------CceEEecCCCCCCeEEEEEEEEeCCcccCC
Confidence 137899999999999999999999886553
No 143
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.89 E-value=2e-22 Score=160.95 Aligned_cols=188 Identities=15% Similarity=0.209 Sum_probs=132.7
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--e------------eCCCCCcEEEEecCCeEEEEEccCC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--K------------PATPNARVTIREKEDLRFLEISEVT 129 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~------------~~~~~~~~~~~~~~~~~~l~i~~~~ 129 (325)
..+.+...|....+.+|++++|.|.+.+.+.+.+.|+|.. . ......++.........+|.|.+++
T Consensus 23 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 23 ADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 102 (237)
T ss_dssp -CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCC
Confidence 3456777788889999999999999988888899999842 1 1112346666655667889999999
Q ss_pred CCCCeEEEEEEEeCCee-EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEec
Q psy1095 130 LEDAGLYTIKVENNYGS-VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIK 208 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~ 208 (325)
.+|+|.|+|.+.+..+. ......+.|... ..+|.+........+..|+.++|.|.+.+.++..+.+.|++++..+.
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~ 179 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKRT---VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 179 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEECC---CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEecC---CCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCC
Confidence 99999999999876542 223345666542 24566665554444556889999999998554238999999998876
Q ss_pred cCC-CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 209 LDS-DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 209 ~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
... .........+..+...+.|.|.....+|.|.|+|.|.|.....
T Consensus 180 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 180 GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp SSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 431 0000000112223345789999999999999999999987544
No 144
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.89 E-value=4.9e-22 Score=155.45 Aligned_cols=175 Identities=21% Similarity=0.305 Sum_probs=128.3
Q ss_pred EecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC-------------------CCcEEEEecCCeEEEEEccCC
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP-------------------NARVTIREKEDLRFLEISEVT 129 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~ 129 (325)
.+.|.+..+.+|+++.|.|...+.+.+.+.|++++..... ..++.+.. ..+|.|.+++
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~---~~~L~i~~v~ 79 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS---NGSLLFQMIT 79 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT---TSCEEECSCC
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec---CCeEEEcccc
Confidence 4455566789999999999987788889999987542211 11222221 1359999999
Q ss_pred CCCCeEEEEEEEeCC-eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEec
Q psy1095 130 LEDAGLYTIKVENNY-GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIK 208 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~ 208 (325)
..|+|.|+|.+.+.. +.....+.|.|...+ ..|.+...... +..|+.+.|.|.+.+.| +.+.|++++..+.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---~~p~i~~~~~~--~~~g~~v~l~C~~~~~p---p~i~W~~~g~~l~ 151 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRRTQATVRFHVHQPV---TQPFLQVTNTT--VKELDSVTLTCLSNDIG---ANIQWLFNSQSLQ 151 (208)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEECCC---CCCEEEESCSS--CCTTCCEEEEEECSCTT---CEEEEEETTEECC
T ss_pred ccCCeEEEEEEEcccCceeEEEEEEEeccCC---CCCEEecCCce--EeeCCCEEEEEECCCCC---CceEEEECCEeCC
Confidence 999999999999874 556677778887652 23555544433 88899999999998743 6899999999887
Q ss_pred cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe-EEEEEE
Q psy1095 209 LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT-SACLIV 262 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v 262 (325)
....... ...+ ..|.|.+++.+|+|.|+|.|.|..|...+ .+.|.|
T Consensus 152 ~~~~~~~--~~~~------~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v 198 (208)
T 3r4d_A 152 LTERMTL--SQNN------SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 198 (208)
T ss_dssp CCSSEEE--ETTT------TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECC
T ss_pred CCCCeEE--cCCC------CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeE
Confidence 5544322 1222 47999999999999999999999987654 344444
No 145
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.89 E-value=1.9e-21 Score=171.29 Aligned_cols=182 Identities=15% Similarity=0.235 Sum_probs=118.8
Q ss_pred eEecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeCC-----------------CCCcEEEEec--CCeEEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPAT-----------------PNARVTIREK--EDLRFLE 124 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~l~ 124 (325)
.+..|....+.+|++++|.|.+.+.+ .+.+.|||+. .... ...++.+..+ ++..+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (475)
T 1iga_A 4 LLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMG 83 (475)
T ss_pred eeccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEE
Confidence 34567778899999999999998754 5689999853 2110 1235554432 3456899
Q ss_pred EccCCCCCCeEEEEEEEeCCe------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCe
Q psy1095 125 ISEVTLEDAGLYTIKVENNYG------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHD 197 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~ 197 (325)
|.+++.+|+|.|.|.+.+..+ .......|.|.... ..+|.+..... ..+.+|+.+.|.|.+.+.++. .+.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~ 160 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS--PTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLS 160 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC--CcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceE
Confidence 999999999999999988654 12234566665321 12344443321 223689999999999987542 258
Q ss_pred eEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 198 ISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 198 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
+.|++++........ .......+..+...+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 161 v~W~~~~~~~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 215 (475)
T 1iga_A 161 VTWSESGQGVTARNF-PPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 215 (475)
T ss_pred EEEcCCCcccceEeC-CceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC
Confidence 999998743211100 0000011222334467999999999999999999998763
No 146
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.89 E-value=3e-22 Score=157.54 Aligned_cols=182 Identities=15% Similarity=0.200 Sum_probs=126.2
Q ss_pred ecCCceEecCCCeEEEEEEEEecCCC---eeEEeeCCeeCCCCC------------------cEEEEe---cCCeEEEEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQPAP---WTSWSKDGKPATPNA------------------RVTIRE---KEDLRFLEI 125 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~~~~~~~~~~~------------------~~~~~~---~~~~~~l~i 125 (325)
..|+.+.+.+|++++|.|.+.+.|.+ .|+|+|++..+.... ++.... .....+|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 45667789999999999999887765 489999875443211 111111 122356999
Q ss_pred ccCCCCCCeEEEEEEEeCCee-EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC
Q psy1095 126 SEVTLEDAGLYTIKVENNYGS-VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN 204 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~ 204 (325)
.+++.+|+|.|.|.+.+..+. ......+.+... ++..........+..|+.+.+.|.+.+.|+ +.+.|++++
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~--p~i~W~~~~ 156 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVP-----PLPSLNPGPALEEGQGLTLAASCTAEGSPA--PSVTWDTEV 156 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC-----CCCEEEECSCEETTCCSEEEEEEEEEEBSC--CEEEEEESS
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeee-----ccceeeeeeeeeeeeccccceeeeccCCcC--ceEEEEECC
Confidence 999999999999999775443 333344444433 122233334455677899999999999998 899999998
Q ss_pred EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 205 RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
..+...... .........+.|.|.++..+|.|.|+|.|.|..+.....+.+.|.
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 157 KGTTSSRSF-----KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp CCEEEEEEE-----ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred cccccCceE-----ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 766532211 111222345689999999999999999999999887766666653
No 147
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.89 E-value=2e-22 Score=152.48 Aligned_cols=164 Identities=16% Similarity=0.234 Sum_probs=123.4
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecC-CCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQP-APWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
+|.+...|....+.+|+++.|.|.+.+.| .+.+.|++++..+..... .+.+.+++..|+|.|+|.+.+.
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTS
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCC
Confidence 46777888888899999999999998876 678999999998875421 2667789999999999999865
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCc
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKE 223 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 223 (325)
.. ...+.|.|... +.+.. .....+.+|+.+.|.|.+.+.++. +.+.|++++..+.....
T Consensus 74 ~~--s~~~~l~v~~~------~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~~~~~~~----------- 132 (170)
T 3ry4_A 74 SL--SDPVHLTVLFE------WLVLQ-TPHLEFQEGETIMLRCHSWKDKPL-VKVTFFQNGKSQKFSHL----------- 132 (170)
T ss_dssp BC--CCCEEEEEECC------SEEEE-CSCSEECTTCCEEEEEEEGGGCCE-EEEEEEETTEEEEEESS-----------
T ss_pred Cc--eEeEEEEEECC------ceEec-CCCceeecCCeEEEEEECCCCCCC-ceEEEEECCeEccccCC-----------
Confidence 43 33466677654 22222 234567889999999999554433 78999999987653211
Q ss_pred ceeEEEEEeCCCCCCCCeEEEEEEEeCCCc-EEeEEEEEE
Q psy1095 224 NLVIARLKIPHVYPEDEGEFTCRVANELGE-VVTSACLIV 262 (325)
Q Consensus 224 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v 262 (325)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 133 ---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 133 ---DPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp ---CCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ---CCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 147999999999999999999999886 333445544
No 148
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=2e-22 Score=155.11 Aligned_cols=168 Identities=15% Similarity=0.161 Sum_probs=121.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.|...|.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+..... ..........|.|.+++.+|+|.|+|.+.+.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 46888888877 7999999999999865 4468999999876531100 0011234567999999999999999999876
Q ss_pred CeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 144 YGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 144 ~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
.+.. ...+.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+ ++ +.+.|+|++..+... .. ...
T Consensus 80 ~~~~~~s~~~~l~V~~~---~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~--~~~~w~k~g~~~~~~----~~--~~~ 146 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEM---YDTPTLSVHP-GPEVISGEKVTFYCRLDT-AT--SMFLLLKEGRSSHVQ----RG--YGK 146 (188)
T ss_dssp TEECCCCCCEEEEEESC---SCCCEEEEES-CSEEETTCEEEEEEECSS-SC--SEEEEEEESSSCEEE----EE--ECS
T ss_pred CCCCCCCCceEEEeccc---CCCCeEEECC-CCccccCCEEEEEEEcCC-CC--CEEEEEECCcccccc----cc--CCC
Confidence 5422 34566777643 1246665444 456889999999999764 33 689999998765431 00 111
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
....|.|.+++.+|+|.|+|.|.|..
T Consensus 147 ----~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 147 ----VQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp ----SEEEEEEEECCGGGCEEEEEECEEET
T ss_pred ----ceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 34689999999999999999999865
No 149
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.89 E-value=1.3e-23 Score=165.08 Aligned_cols=183 Identities=18% Similarity=0.237 Sum_probs=127.0
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
+.. |....+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....++.+........|.|.+++.+|+
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 81 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE 81 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC
Confidence 344 77788999999999999888777889999852 221 013466666556667899999999999
Q ss_pred eEEEEEEEeC-Cee--EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC
Q psy1095 134 GLYTIKVENN-YGS--VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD 210 (325)
Q Consensus 134 G~Y~C~~~~~-~~~--~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~ 210 (325)
|.|+|.+.+. .+. ......|.|...+. .+|.+........+..|+.+.|.|.+.+.+++.+.+.|++++..+...
T Consensus 82 G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~--~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 82 AAYYCLSSYGDNNDLVFGSGTQLTVLRGPK--SSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp SEEEEEEEETTTTEEEECCCEEEEEECCCC--BCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred EEEEEEEEcccCcccccCCceEEEEccCCC--CCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC
Confidence 9999999862 221 12234566643321 346665544444456799999999999885433799999999988654
Q ss_pred CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 211 SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
....... ..+..+...+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 160 ~~~~~~~-~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 160 VKTTKPS-KQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp CBCCCCB-CSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred eecCCce-ecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 2211110 111112334679999999999999999999987653
No 150
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.89 E-value=9.7e-23 Score=170.57 Aligned_cols=183 Identities=17% Similarity=0.190 Sum_probs=115.2
Q ss_pred CCCeeEecCCceEecCC--CeEEEEEEEEec-C-CCeeEEeeCCeeCCCCCcE--EEEecCC----eEEEEEccCCCCCC
Q psy1095 64 SSPRFYAVPHNKICDLG--DTVRFQCSVTGQ-P-APWTSWSKDGKPATPNARV--TIREKED----LRFLEISEVTLEDA 133 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g--~~v~l~C~~~~~-p-~~~v~W~~~~~~~~~~~~~--~~~~~~~----~~~l~i~~~~~~d~ 133 (325)
.+|.+...+.......| +++.|.|.+.+. | .+.|+|+|+|..+...... .... ++ ...|.|.+...+|.
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~-~g~~~~~s~l~i~~~~~~d~ 84 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQE-GELASTQSELTLSQKHWLSD 84 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEE-TTEEEEEEEEEEEHHHHHTT
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCcc-CCcEEEEEEEEEcHHHcCCC
Confidence 46666555443333344 699999999885 4 4789999999988654321 1112 22 13477777777899
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEECCCcccCCCee-eecCcCeeEecCCcEEEEEEEEecCCCCC---eeEEeeCCEEecc
Q psy1095 134 GLYTIKVENNYGSVEATARLEIMDPRAIISRPKV-LNGLENLRCCDGDSVTFECQVQVVPPNDH---DISWFRNNRLIKL 209 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~-~~~~~~~~v~~g~~v~l~C~~~~~~~~~~---~~~W~~~~~~~~~ 209 (325)
|.|+|.+.|..+.....+.+.+.. ....|.+ ...+....+.+|+.+.|.|.+.+.++. + .+.|++++.....
T Consensus 85 g~Y~C~a~n~~~~~~~~~~~~~~~---~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~-p~~~~i~W~k~~g~~~~ 160 (323)
T 2wqr_A 85 RTYTCQVTYQGHTFEDSTKKCADS---NPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPS-KGTVQLTWSRASGKPVN 160 (323)
T ss_dssp CCEEEEEEETTEEEEEEECCCCCS---SGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCC-SSCCEEEEEETTCCCCC
T ss_pred CcEEEEEEeCCCCcceeeecCCCC---CCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCC-CCceEEEEEECCCcccc
Confidence 999999999876554333221111 1122333 333333456789999999999987543 4 8999997533322
Q ss_pred CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 210 DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
... .......+......+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 161 ~~~-~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 161 HST-RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp CCC-CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred ccc-CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC
Confidence 111 111001111222456899999999999999999999764
No 151
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.89 E-value=1.2e-22 Score=155.81 Aligned_cols=161 Identities=17% Similarity=0.227 Sum_probs=120.9
Q ss_pred ceEecCCCeEEEEEEEEecCCCeeEEeeCCee--CCC------------CCcEEEEe---cCCeEEEEEccCCCCCCeEE
Q psy1095 74 NKICDLGDTVRFQCSVTGQPAPWTSWSKDGKP--ATP------------NARVTIRE---KEDLRFLEISEVTLEDAGLY 136 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~--~~~------------~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y 136 (325)
.+.+.+|+++.|.|.+.+.|.+.+.|++++.. +.. ..++.... .++..+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45688999999999998888899999998752 110 11222221 22345699999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceE
Q psy1095 137 TIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPE 216 (325)
Q Consensus 137 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 216 (325)
+|.+.+..+ .+.|.|... . .+....+.+|+.++|.|.+.+.|. +.+.|++++..+..
T Consensus 84 ~C~~~~~~~----~~~l~V~~~---------~-~~~~~~v~~g~~~~l~C~~~~~p~--~~v~W~~~~~~~~~------- 140 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGL---------T-ANSDTHLLQGQSLTLTLESPPGSS--PSVQCRSPRGKNIQ------- 140 (184)
T ss_dssp EEEETTEEE----EEEEEEEEE---------E-ESSCSEEETTCCEEEEEECCTTCC--CEEEEECTTSCEEE-------
T ss_pred EEEEEcCCC----cEEEEEEEe---------c-CCCCceeecCCCEEEEEEcCCCCC--CEEEEEeCCCcccc-------
Confidence 999976543 344555421 1 123446789999999999988876 89999998765421
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 217 VQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 217 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
.. ..|.|.+++.+|+|.|+|.|.|..+.....+.|.|...+
T Consensus 141 --~~-------~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 141 --GG-------KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp --ES-------SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred --Cc-------eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 22 489999999999999999999999988888888885544
No 152
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.88 E-value=3.5e-22 Score=161.14 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=129.3
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecC-----CCeeEEeeCCe--eC------------CCCCcEEEEecCCeEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQP-----APWTSWSKDGK--PA------------TPNARVTIREKEDLRFLE 124 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~ 124 (325)
..+.+...|....+.+|++++|.|.+.+.+ .+.+.|+|++. .. ....++.+...++..+|.
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 112 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLR 112 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEE
Confidence 355667778888899999999999998877 58899998541 11 112466665556667899
Q ss_pred EccCCCCCCeEEEEEEEeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC
Q psy1095 125 ISEVTLEDAGLYTIKVENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRN 203 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~ 203 (325)
|.+++.+|+|.|.|.+.+..+.. .....|.|... ..+|.+........+..|+.++|.|.+.+.+++...+.|+++
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 189 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKID 189 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCC---CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCC---CcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEEC
Confidence 99999999999999998765422 22345666542 124666554433334478999999999986553248999999
Q ss_pred CEEeccCCCCceEEE-ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 204 NRLIKLDSDMKPEVQ-VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
+..+........... ..+..+...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 190 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 190 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp TEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 988754300000000 111223345789999999999999999999976543
No 153
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.88 E-value=4.6e-22 Score=156.65 Aligned_cols=180 Identities=16% Similarity=0.186 Sum_probs=122.0
Q ss_pred CCceEecCCCeEEEEEEE-EecC-CCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCCCCCCeE
Q psy1095 72 PHNKICDLGDTVRFQCSV-TGQP-APWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVTLEDAGL 135 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~-~~~p-~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 135 (325)
|....+.+|++++|.|.+ .+.+ .+.+.|+|++ ..+ ....++.........+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 667789999999999995 4332 5789999853 111 11346666555666789999999999999
Q ss_pred EEEEEEeCCe--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCC
Q psy1095 136 YTIKVENNYG--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDM 213 (325)
Q Consensus 136 Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~ 213 (325)
|.|.+.+..+ .......|.|... ..+|.+...........|+.++|.|.+.+.+++...+.|++++..+......
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~---~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 163 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRT---VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE 163 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE
T ss_pred EEEEEEeCCCcceECCCEEEEEcCC---CCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeE
Confidence 9999998765 2223345666432 1346665543333334688999999999855432489999999987643100
Q ss_pred ceEEEe-cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 214 KPEVQV-DSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 214 ~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
...... .+..+...+.|.|..+..+|+|.|+|.|.|.....
T Consensus 164 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 164 SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred ecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 000001 11223345689999999999999999999987543
No 154
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.88 E-value=1.3e-22 Score=154.40 Aligned_cols=155 Identities=14% Similarity=0.273 Sum_probs=115.7
Q ss_pred eEecCCCeEEEEEEEEe--cCCCeeEEeeCCeeCC----------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 75 KICDLGDTVRFQCSVTG--QPAPWTSWSKDGKPAT----------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 75 ~~v~~g~~v~l~C~~~~--~p~~~v~W~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
+.+.+|++++|.|...+ .+.+.+.|+|++..+. ...++.+... .+|.|.+++.+|+|.|+|.+.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~---gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN---GDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTT---SCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCC---CcEEEcccccccCEEEEEEEEe
Confidence 45789999999995322 4567899999986542 2345555322 2499999999999999999999
Q ss_pred CCeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec
Q psy1095 143 NYGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 143 ~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
..+.. ...+.|.|...+ ..|.+. ..+..+.|.|.+.+.|+ +.+.|++++..+..+..
T Consensus 83 ~~g~~~~~~~~~l~V~~~~---~~p~i~--------~~~~~v~L~C~~~g~p~--p~i~W~~~g~~l~~~~~-------- 141 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMV---SKPMIY--------WECSNATLTCEVLEGTD--VELKLYQGKEHLRSLRQ-------- 141 (176)
T ss_dssp TTCCEEEEEEEEEEEECCC---CCCEEE--------EETTTTEEEEECSSCSS--CEEEEEETTEEEEEESS--------
T ss_pred CCCCEEEEEEEEEEEeCCC---CCCEEE--------ecCCcEEEEEEecCCCC--cEEEEEECCEECCCCCc--------
Confidence 88875 666778877642 224332 23456999999999888 89999999988764322
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
+.|.+++.+|+|.|+|.|.|..|.....+.|.+
T Consensus 142 ---------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 142 ---------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp ---------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred ---------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 334467799999999999999998887766543
No 155
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.88 E-value=1.5e-20 Score=145.68 Aligned_cols=153 Identities=23% Similarity=0.326 Sum_probs=115.6
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ....|.|.+++.+|+|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~ 76 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPK--PIVKWYRQGKEIIADGLKYRIQEFKG----GYHQLIIASVTDDDATV 76 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSC--CEEEEEETTEECCCCSSSEEEEEETT----TEEEEEECSCCGGGCSE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCC--CEEEEEECCEECccCCCcEEEEEcCC----CEEEEEECcCCHHhCEE
Confidence 3577877778889999999999999998887 89999999998875432222211222 34589999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC-----------------------------------------eecCCCCceEEEEe
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG-----------------------------------------KDLTSDGRLNIITV 281 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~-----------------------------------------~~~~~~~~~~~~~~ 281 (325)
|+|.+.|..+.....+.|.|...+. ..+..+++......
T Consensus 77 Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (197)
T 2j8h_A 77 YQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVT 156 (197)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEEC
T ss_pred EEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEc
Confidence 9999999988877777766643221 11112222333333
Q ss_pred CCEEEEEEcC-CCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 282 GGTSVLTIED-ITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 282 ~~~~~l~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
.....|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 157 ~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 157 RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp SSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 4556899999 999999999999999999999999999864
No 156
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.88 E-value=1.7e-21 Score=155.94 Aligned_cols=181 Identities=17% Similarity=0.206 Sum_probs=124.0
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecC----CCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQP----APWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEV 128 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p----~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~ 128 (325)
.+...|....+.+|++|+|.|.+.+.| .+.+.|+|+. ..+ ....++.+...+...+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 456778888899999999999998887 7889999852 211 0134666655566678999999
Q ss_pred CCCCCeEEEEEEEeCCee-EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC--CE
Q psy1095 129 TLEDAGLYTIKVENNYGS-VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRN--NR 205 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~--~~ 205 (325)
+.+|+|.|+|.+.+..+. ......|.|...+....++.+...+....+.+|+.++|.|.+.+.|.+.+.+.|+++ +.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 999999999999887543 233456777654321122334444556778899999999999988742268999995 22
Q ss_pred Eec-----c--C--------CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEe
Q psy1095 206 LIK-----L--D--------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVAN 249 (325)
Q Consensus 206 ~~~-----~--~--------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 249 (325)
.+. . . ...+.....+ .......|.|.+++.+|+|.|+|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITAD--TSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEE--TTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEc--ccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 110 0 0 0001111111 001246799999999999999999985
No 157
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.88 E-value=9.1e-21 Score=146.49 Aligned_cols=151 Identities=25% Similarity=0.450 Sum_probs=114.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ....|.|.+++.+|+|.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y 78 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPV--PEVSWFRDGQVISTSTLPGVQISFSD----GRAKLTIPAVTKANSGRY 78 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESC--CEEEEEESSSBCCTTTSTTCEEEEET----TEEEEEESSCCGGGCEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCC--CEEEEEECCEEcccccCCceEEEeCC----CEEEEEECCCCcccCEEE
Confidence 466677677788999999999999999887 79999999988766542222222222 347899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEe---------------------------------------eCCeecCCCCceEEEEeCCE
Q psy1095 244 TCRVANELGEVVTSACLIVDV---------------------------------------VKGKDLTSDGRLNIITVGGT 284 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~---------------------------------------~~~~~~~~~~~~~~~~~~~~ 284 (325)
+|.+.|..+.......|.|.. ..+..+..+.+......+..
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 158 (194)
T 2a38_A 79 SLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDL 158 (194)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTE
T ss_pred EEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCE
Confidence 999999888777666666532 11222222333334444455
Q ss_pred EEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 285 SVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 285 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
..|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 159 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 159 YSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 589999999999999999999999999999999885
No 158
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.88 E-value=1.9e-21 Score=170.51 Aligned_cols=182 Identities=15% Similarity=0.267 Sum_probs=122.9
Q ss_pred EecCCceEecCCCeEEEEEEEEecC--CCeeEEeeC--Cee---C--------------CCCCcEEEEec--CCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKD--GKP---A--------------TPNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~--~~~---~--------------~~~~~~~~~~~--~~~~~l~i 125 (325)
...|....+.+|++++|.|.+.+.+ .+.+.|||+ +.. + ....++.+..+ +....|.|
T Consensus 4 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (457)
T 1hzh_H 4 LVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMEL 83 (457)
T ss_dssp EEECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEE
Confidence 3456667899999999999998876 678999984 221 1 01246655442 34578999
Q ss_pred ccCCCCCCeEEEEEEEeCCe------------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCC
Q psy1095 126 SEVTLEDAGLYTIKVENNYG------------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPP 193 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~------------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~ 193 (325)
.+++.+|+|.|+|.+.+..+ .......|.|...+ ..+|.+........+.+|+.+.|.|.+.+..+
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 161 (457)
T 1hzh_H 84 RSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 161 (457)
T ss_dssp CSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC--CBCCEEEEECCCSCCCTTCCEEEEEEEESBBS
T ss_pred CCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC--CCCCeEEecCccccccCCCcEEEEEEEeEEeC
Confidence 99999999999999987654 12234566665421 12455544443445678999999999998743
Q ss_pred CCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 194 NDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 194 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
..+.+.|++++..+.... .......+..+...+.|.|.++..+| |.|+|.|.|..+...
T Consensus 162 ~~~~v~W~k~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 162 EPVTVSWNSGALTSGVHT--FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 220 (457)
T ss_dssp CCCEEEETTTTBCTTEEE--EEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE
T ss_pred CCeEEEEEeCCEeccceE--cCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc
Confidence 227899999986542110 01111122233344689999999999 999999999776543
No 159
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.87 E-value=8.7e-21 Score=152.48 Aligned_cols=186 Identities=15% Similarity=0.260 Sum_probs=124.4
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC-----------------CCCCcEEEEec--CCeEEEEEcc
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA-----------------TPNARVTIREK--EDLRFLEISE 127 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~ 127 (325)
.|.+..+.+|++++|.|.+.+.| .+.+.|+|+. ... ....++.+..+ .+..+|.|.+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNS 87 (247)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECc
Confidence 44567899999999999999876 6789999842 110 11246665542 4467899999
Q ss_pred CCCCCCeEEEEEEEeCCee--EEEEEEEEEECCCc---------ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC
Q psy1095 128 VTLEDAGLYTIKVENNYGS--VEATARLEIMDPRA---------IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH 196 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~---------~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~ 196 (325)
++.+|+|.|+|.+.+..+. ......|.|...+. ...++.+...+....+.+|+.++|.|.+.+.++ +
T Consensus 88 v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~--~ 165 (247)
T 2ghw_B 88 LRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVR--S 165 (247)
T ss_dssp CCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCT--T
T ss_pred CCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCcc--c
Confidence 9999999999999987332 22345677765421 012344555555667889999999999998887 7
Q ss_pred eeEEee--CCEEecc----------CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE-eEEEEEE
Q psy1095 197 DISWFR--NNRLIKL----------DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV-TSACLIV 262 (325)
Q Consensus 197 ~~~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v 262 (325)
.+.|++ ++..+.. ....+......+ ....|.|.+++.+|+|.|+|.|.+...... ....|.|
T Consensus 166 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 166 NLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSG----TDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSS----SEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred eEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCC----CeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEE
Confidence 899999 4443310 001111111111 346799999999999999999988543222 2344555
No 160
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.87 E-value=8.2e-22 Score=156.75 Aligned_cols=175 Identities=19% Similarity=0.283 Sum_probs=124.5
Q ss_pred ecCCceEecCCCeEEEEEEEEecCC-CeeEEeeCCeeCC---------CCCcE--EEE----------ecCCeEEEEEcc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQPA-PWTSWSKDGKPAT---------PNARV--TIR----------EKEDLRFLEISE 127 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p~-~~v~W~~~~~~~~---------~~~~~--~~~----------~~~~~~~l~i~~ 127 (325)
..|....+.+|+++.|.|.+.+.+. +.+.|++++.... ....+ ++. ... ...|.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~L~i~~ 83 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDS-QGRLVLAE 83 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECT-TCCEEESS
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCC-CceEEEcc
Confidence 4566778999999999999998885 8999998654321 01101 111 111 12399999
Q ss_pred CCCCCCeEEEEEEEeCC-eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcE-EEEEEE-EecCCCCCeeEEeeCC
Q psy1095 128 VTLEDAGLYTIKVENNY-GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSV-TFECQV-QVVPPNDHDISWFRNN 204 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v-~l~C~~-~~~~~~~~~~~W~~~~ 204 (325)
++.+|+|.|+|.+.+.. +.....+.|.|...+. .|.+...+....+.+|+.+ .|.|.+ .+.|. +.+.|++++
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~---~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~--p~i~W~~~~ 158 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPE---ATEVSPNKGTLSVMEDSAQEIATCNSRNGNPA--PKITWYRNG 158 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC---CCEEEECCSSCCTTCCSEEEEEEEEEEEEBSC--CEEEEEETT
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCC---CcEEecCCcceeecCCCceEEEEEEeECcccC--CEEEEEECC
Confidence 99999999999999886 6777888888887643 3666666555667789988 999999 78887 899999999
Q ss_pred EEeccCC----CCceEEE---ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeC
Q psy1095 205 RLIKLDS----DMKPEVQ---VDSKENLVIARLKIPHVYPEDEGEFTCRVANE 250 (325)
Q Consensus 205 ~~~~~~~----~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 250 (325)
..+.... ....... .....+...+.|.|.....+|.|.|+|.|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 159 QRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 9887554 2111110 11122333467888866666799999999994
No 161
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.87 E-value=3.2e-21 Score=150.08 Aligned_cols=172 Identities=15% Similarity=0.151 Sum_probs=119.2
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcE-EEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARV-TIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|...|. ..+.+|++++|.|.+. .+.+.+.|+|++..+...... ..........|.|.+++.+|+|.|+|.+.+
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 5778887776 6688999999999986 477899999998765321110 011112345799999999999999999986
Q ss_pred CC-----eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 143 NY-----GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 143 ~~-----~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
.. ......+.|.|.... .+|.+...+. ..+.+|+.++|.|.+.+ ++ +.+.|+|++..+........
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~---~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~--~~~~w~k~g~~~~~~~~~~~-- 155 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLY---EKPSLSAQPG-PTVLAGENVTLSCSSRS-SY--DMYHLSREGEAHERRLPAGP-- 155 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSS---CCCEEEEESC-SEECTTCEEEEEEEESS-CC--SEEEEEETTCSSCEEEECEE--
T ss_pred CCCCccccCCCCCEEEEeeccC---CCCceecCCC-CccCCCCeEEEEEeCCC-CC--ceEEEEECCcccCccccccc--
Confidence 42 122345667776542 3466665544 46889999999999875 34 78999999876543211100
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
...+ .....|.|.+++ |+|.|+|.|.+..
T Consensus 156 ~~~~---~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 156 KVNG---TFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EETT---EEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred ccCC---ceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 0111 124689999998 9999999998753
No 162
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.87 E-value=1.3e-23 Score=183.01 Aligned_cols=179 Identities=15% Similarity=0.220 Sum_probs=118.3
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC----C-------------CCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA----T-------------PNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~----~-------------~~~~~~~~~~--~~~~~l~i~ 126 (325)
..+....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ . ...++.+..+ ++..+|.|.
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 456667899999999999998754 6789999863 211 0 0235544332 234579999
Q ss_pred cCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEE
Q psy1095 127 EVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRL 206 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~ 206 (325)
+++.+|+|.|+|.+.+..+.......|.|.... ..+|.+........+.+|+.+.|.|.+.+.++....+.|++++..
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~ 161 (434)
T 1igy_B 84 SLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAK--TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 161 (434)
T ss_dssp SBCGGGCSEECCCCSSSSCCCCCCEECEECCSC--CBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBC
T ss_pred CCChHHCEEEEEEEEccccccCCceEEEEccCC--CCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcC
Confidence 999999999999998754333344566665321 123444433333345789999999999987332139999999875
Q ss_pred eccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 207 IKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
+........ .....+...+.|.|.++..+| |.|+|.|.|..+..
T Consensus 162 ~~~~~~~~~---~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~ 205 (434)
T 1igy_B 162 SGVHTFPAV---LQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASST 205 (434)
T ss_dssp SSEEECCCE---ECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTC
T ss_pred CCeEecCce---ecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCc
Confidence 321100000 111223344679999999889 99999999988763
No 163
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.87 E-value=1.9e-22 Score=160.89 Aligned_cols=187 Identities=14% Similarity=0.194 Sum_probs=124.3
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecC-CC-eeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQP-AP-WTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVT 129 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~-~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~ 129 (325)
+.+.. |....+.+|++++|.|.+.+.+ .+ .+.|+|++ ..+ ....++.........+|.|.+++
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 99 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLR 99 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCC
Confidence 34444 7777899999999999998754 34 69999863 211 11246665555566789999999
Q ss_pred CCCCeEEEEEEEeCCee---EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEE
Q psy1095 130 LEDAGLYTIKVENNYGS---VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRL 206 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~ 206 (325)
.+|+|.|+|.+.+..+. ......|.|...+. .+|.+........+..|+.++|.|.+.+.+++.+.+.|++++..
T Consensus 100 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~--~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 177 (234)
T 2j6e_L 100 SEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPK--AAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAP 177 (234)
T ss_dssp STTCSEEEEEEEETTTTEEEECCCBCCCBCCCCC--CCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEE
T ss_pred HHHCEEEEEEEEcCCcceeEecCCEEEEEecCCC--CCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEE
Confidence 99999999999987662 22234455533211 23444443333333468899999999986653258999999998
Q ss_pred eccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 207 IKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
+.............+..+...+.|.|.++..+|.|.|+|.|.|......
T Consensus 178 l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 178 VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp CCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred CCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 7543110000001111223446899999999999999999999876543
No 164
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.87 E-value=5.1e-21 Score=151.23 Aligned_cols=181 Identities=15% Similarity=0.231 Sum_probs=120.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecC-----CCeeEEeeCCeeC---------CC------CCcEEEEe---cCCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP-----APWTSWSKDGKPA---------TP------NARVTIRE---KEDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~~~~~~~---------~~------~~~~~~~~---~~~~~~l~i~ 126 (325)
.++..+.+.+|+++.|.|.+.+.| .+.+.|++++..+ .. ..+..+.. ..+..+|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 345566788999999999987766 3489999975322 10 12333321 1245689999
Q ss_pred cCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC-CE
Q psy1095 127 EVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRN-NR 205 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~-~~ 205 (325)
+++.+|+|.|+|.+.+ .+.....+.|.|..++. .+.... ...+..|+.+.|.|.+.|.|. +.+.|+++ +.
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~---~~~~~~---~~~~~~g~~v~L~C~~~g~P~--p~i~W~~~~g~ 156 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYN---KINQRI---LVVDPVTSEHELTCQAEGYPK--AEVIWTSSDHQ 156 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCC---CCEEEE---EEEETTTTEEEEEEEEEEBSC--CEEEEEETTCC
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCC---CCCcee---eeeecCCCcEEEEEEecCCCC--CeEEEEECCCc
Confidence 9999999999999998 55566678888876532 222211 124568999999999999887 89999998 55
Q ss_pred EeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 206 LIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
.+......... ..........+.|. +..+|.|.|+|.|.|..+.....+.|.|.
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~~l~---v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 157 VLSGKTTTTNS-KREEKLFNVTSTLR---INTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EECCEEEEEEC-C----CEEEEEEEE---EECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred eecCccceEEE-cCCCCCEEEEEEEE---EeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 44322111000 01111111223333 44689999999999999999888888773
No 165
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.87 E-value=6.7e-21 Score=150.29 Aligned_cols=183 Identities=16% Similarity=0.231 Sum_probs=122.2
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeC--CeeCC-----------------CCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKD--GKPAT-----------------PNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|.+..+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...++.+... ....+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 456677899999999999998765 688999986 32210 1235555432 345689999
Q ss_pred cCCCCCCeEEEEEEEeCCe----eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEe-cCCCCC-eeEE
Q psy1095 127 EVTLEDAGLYTIKVENNYG----SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQV-VPPNDH-DISW 200 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~-~~~W 200 (325)
+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.+.|.|.+.+ .|. + .+.|
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~--p~~v~W 160 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK--TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE--PVTVTW 160 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC--CBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSS--CCEEEE
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCC--CCCCeEEEecCccccccCCeEEEEEEcccccCC--CeEEEE
Confidence 9999999999999998752 12234566766531 13455554443345678999999999998 666 6 9999
Q ss_pred eeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 201 FRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
++++..+....... . .....+...+.|.|.... .|.|.|+|.|.|..+.......+
T Consensus 161 ~~~g~~~~~~~~~~-~--~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 161 NSGSLSSGVHTFPA-V--LQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp GGGTBCTTEEECCC-E--ESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEEEC
T ss_pred EeCCcccceEecCC-c--ccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEEec
Confidence 99987642111111 0 111222344678995444 46699999999988776544433
No 166
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.87 E-value=3.1e-20 Score=143.78 Aligned_cols=151 Identities=25% Similarity=0.432 Sum_probs=116.0
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+......... ..+ ....|.|.+++.+|+|.|
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~d~G~Y 78 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPL--PDIKWYRFGKELIQSRKYKMS--SDG----RTHTLTVMTEEQEDEGVY 78 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESC--CEEEEEETTEEECCCSSEEEE--ESS----SEEEEEEECCSGGGCEEE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCC--CEEEEEECCEECCCCccEEEE--eCC----CEEEEEEecCCccCCEEE
Confidence 466677777788999999999999999887 899999999988755443332 333 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEeeCC---------------------------------------eecCCCCceEEEEeCCE
Q psy1095 244 TCRVANELGEVVTSACLIVDVVKG---------------------------------------KDLTSDGRLNIITVGGT 284 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~~~---------------------------------------~~~~~~~~~~~~~~~~~ 284 (325)
+|.+.|..+.......|.|...+. ..+..+.+.........
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 158 (197)
T 3lcy_A 79 TCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHY 158 (197)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSE
T ss_pred EEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCE
Confidence 999999988877776666643322 12222223333333444
Q ss_pred EEEEEcCCCC-CCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 285 SVLTIEDITG-DDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 285 ~~l~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
..|.|.++.. +|+|.|+|.|.|..|..+..+.|.|.++
T Consensus 159 ~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 159 THLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp EEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred EEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEecC
Confidence 6899999995 8999999999999999999999999864
No 167
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.87 E-value=1e-21 Score=159.88 Aligned_cols=190 Identities=17% Similarity=0.258 Sum_probs=122.6
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEE---ecCCCeeEEeeCCeeCCCC------------------CcEEEEe--cCCeE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVT---GQPAPWTSWSKDGKPATPN------------------ARVTIRE--KEDLR 121 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~---~~p~~~v~W~~~~~~~~~~------------------~~~~~~~--~~~~~ 121 (325)
.+.+...+....+.+|+++.|.|.+. +.+.+.+.|++++...... .++.+.. .....
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 35566777788899999999999987 6677889999965433221 2332211 12235
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCee--EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEE---ecCCCCC
Q psy1095 122 FLEISEVTLEDAGLYTIKVENNYGS--VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQ---VVPPNDH 196 (325)
Q Consensus 122 ~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~---~~~~~~~ 196 (325)
+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|... .| ....+.+|+.+.|.|.+. +.|. +
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-----~p------~~~~v~~G~~v~L~C~~~~~~~~p~--~ 151 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE-----EP------RDLRVRVGDTTQMRCSIQSTEEKRV--T 151 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC-----CC------SEEEEETTCCEEECCBCEESSSSCC--C
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc-----CC------CccccccCCcEEEEEEecCCCCCCc--c
Confidence 6999999999999999999886543 344555555421 12 245688999999999994 4455 8
Q ss_pred eeEEeeCCEEe-c-----------------cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEE
Q psy1095 197 DISWFRNNRLI-K-----------------LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSA 258 (325)
Q Consensus 197 ~~~W~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 258 (325)
.+.|++++... . ....+.......+........|.|.+++.+|+|.|+|.|.|..+.....+
T Consensus 152 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 231 (268)
T 3mj6_A 152 KVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTI 231 (268)
T ss_dssp EEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEE
Confidence 99999943211 0 00111100111111112345899999999999999999999999888888
Q ss_pred EEEEEeeCC
Q psy1095 259 CLIVDVVKG 267 (325)
Q Consensus 259 ~l~v~~~~~ 267 (325)
.|.|...++
T Consensus 232 ~l~V~~~~p 240 (268)
T 3mj6_A 232 VLHVVQDEF 240 (268)
T ss_dssp EEEEECC--
T ss_pred EEEEEcCCC
Confidence 888854443
No 168
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.87 E-value=9.9e-21 Score=151.67 Aligned_cols=182 Identities=15% Similarity=0.136 Sum_probs=119.5
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee---C---------CCCCcEEEEecCCeEEEEEccCCCCC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP---A---------TPNARVTIREKEDLRFLEISEVTLED 132 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~~~~~d 132 (325)
.+...|....+.+|++++|.|.+.+.|.+.+.|+|+. .. + ....++.+...+...+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4667788889999999999999998888899999853 11 1 01346666555566789999999999
Q ss_pred CeEEEEEEEeCCee-EEEEEEEEEECCCcc-------cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC
Q psy1095 133 AGLYTIKVENNYGS-VEATARLEIMDPRAI-------ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN 204 (325)
Q Consensus 133 ~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~-------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~ 204 (325)
+|.|.|.+.+..+. ......|.|...+.. ...+.+...+....+.+|+.++|.|.+.+.+.+.+.+.|++++
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 99999999876432 123346666554310 0112223333345688999999999999876322789999842
Q ss_pred --EEec------cCC--------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeC
Q psy1095 205 --RLIK------LDS--------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANE 250 (325)
Q Consensus 205 --~~~~------~~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 250 (325)
..+. ... ..+.....+. ......|.|.+++.+|+|.|.|.|.|.
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDT--SKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEET--TTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecC--CCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 2211 000 1111111110 013468999999999999999999874
No 169
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.87 E-value=1.2e-20 Score=145.73 Aligned_cols=161 Identities=17% Similarity=0.275 Sum_probs=113.7
Q ss_pred cCCceEecCCCeEEEEEEEEe-cCCCeeEEeeCCeeCC---CC---------------CcEEEEecCCeEEEEEccCCCC
Q psy1095 71 VPHNKICDLGDTVRFQCSVTG-QPAPWTSWSKDGKPAT---PN---------------ARVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~-~p~~~v~W~~~~~~~~---~~---------------~~~~~~~~~~~~~l~i~~~~~~ 131 (325)
.|..+.+.+|++|+|.|.+.+ .+.+.+.|++++..+. .. .++.+. ...+|.|.+++.+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~ 80 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKME 80 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcc
Confidence 456677899999999999865 4557899999876442 10 122322 2356999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCC-cEEEEEEEEecCCCCCeeEEeeCCEEeccC
Q psy1095 132 DAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGD-SVTFECQVQVVPPNDHDISWFRNNRLIKLD 210 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~-~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~ 210 (325)
|+|.|.|.+.+..+.....+.|.|...+. .|.+.... .....|. .+.|.|.+.+.++. +.+.|++++..+...
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~---~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~-p~i~W~~~g~~l~~~ 154 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSSYTLRILRQLR---NIQVTNHS--QLFQNMTCELHLTCSVEDADDN-VSFRWEALGNTLSSQ 154 (193)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCE---EEEEEECC--C---CSSEEEEEEEEEESCCTT-CEEEEEETTEEEESS
T ss_pred cCceEEEEEEecCCCeEEEEEEEEEccCC---CCeEecCc--eeecCCCceEEEEEEEecCCCc-eEEEEEeCCEEcCCC
Confidence 99999999998887666678888876522 24444332 1233465 79999999985533 899999998865321
Q ss_pred CCCceEEEecCCcceeEEEEEeCCCCCC-CCeEEEEEEEeCCCcEEeE
Q psy1095 211 SDMKPEVQVDSKENLVIARLKIPHVYPE-DEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~~~~~ 257 (325)
..|.|.....+ |.|.|+|.|.|..+.....
T Consensus 155 -----------------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 155 -----------------PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp -----------------SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred -----------------CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 14566544444 8999999999999887543
No 170
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.86 E-value=6.4e-21 Score=155.82 Aligned_cols=185 Identities=16% Similarity=0.159 Sum_probs=122.6
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCe-----eC---------CCCCcEEEEecCCeEEEEEccCC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGK-----PA---------TPNARVTIREKEDLRFLEISEVT 129 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~-----~~---------~~~~~~~~~~~~~~~~l~i~~~~ 129 (325)
..+.+...|....+.+|++++|.|.+.+.|.+.+.|+|++. .+ ....++.+...+...+|.|.+++
T Consensus 11 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 11 GDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp -CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred cceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 34567778888899999999999999988889999998542 11 11346666655666789999999
Q ss_pred CCCCeEEEEEEEeCCee-EEEEEEEEEECCCcc--------cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEE
Q psy1095 130 LEDAGLYTIKVENNYGS-VEATARLEIMDPRAI--------ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISW 200 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~--------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W 200 (325)
.+|+|.|.|.+.+..+. ......|.|...+.. ..++.+...+....+.+|+.++|.|.+.+.++..+.+.|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEE
Confidence 99999999999886442 222345566543210 011222333456778899999999999987642378999
Q ss_pred eeCC--EEe---c------------cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeC
Q psy1095 201 FRNN--RLI---K------------LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANE 250 (325)
Q Consensus 201 ~~~~--~~~---~------------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 250 (325)
++++ ..+ . .....+.....++ ......|.|.+++.+|+|.|+|.+.|.
T Consensus 171 ~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 171 VRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADT--SKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEG--GGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecC--CCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 9963 111 0 0001111111110 012358999999999999999999997
No 171
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.86 E-value=4.2e-20 Score=148.58 Aligned_cols=184 Identities=17% Similarity=0.213 Sum_probs=117.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecCCCe-----eEEeeCCeeCCCC--------CcE-------EEE---ecCCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQPAPW-----TSWSKDGKPATPN--------ARV-------TIR---EKEDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p~~~-----v~W~~~~~~~~~~--------~~~-------~~~---~~~~~~~l~i~ 126 (325)
..|....+.+|++++|.|.+.+.|.+. +.|++++...... ... .+. ...+..+|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 345566789999999999999887765 9999864322110 000 000 01223459999
Q ss_pred cCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEe-cCCCCC-eeEEeeCC
Q psy1095 127 EVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQV-VPPNDH-DISWFRNN 204 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~-~~~W~~~~ 204 (325)
+++.+|+|.|+|.+.+..+.....+.|.|..+ |.+...+. ..+..|..+.|.|.+.+ .|. + .+.|++++
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~------P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~--pi~v~W~k~g 158 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVAS------PASRLLLD-QVGMKENEDKYMCESSGFYPE--AINITWEKQT 158 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC------CEEEEECC---------CEEEEEEEEEBSS--CCEEEEEEEC
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEecC------CceEEecC-CccccCCCcEEEEEEccEECC--CeEEEEEECC
Confidence 99999999999999998887777888888764 44444333 33456778889999998 566 6 99999998
Q ss_pred EEeccCC----CC--ceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE--EeEEEEEE
Q psy1095 205 RLIKLDS----DM--KPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV--VTSACLIV 262 (325)
Q Consensus 205 ~~~~~~~----~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v 262 (325)
..+.... .. ..........+...+.|.|.....+|.|.|+|.|.|..+.. ...+.|.|
T Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 159 QKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 6443210 00 01111122233455789999999999999999999988864 44445555
No 172
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.86 E-value=5.5e-22 Score=152.34 Aligned_cols=150 Identities=15% Similarity=0.263 Sum_probs=106.6
Q ss_pred EecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEcc-CCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy1095 76 ICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISE-VTLEDAGLYTIKVENNYGSVEATARLE 154 (325)
Q Consensus 76 ~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 154 (325)
...+|+++.|.|.+.+ +. .++|+|++..+.... ..+|.|.+ ++.+|+|.|+|.+.|..+.....+.+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~---------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH---------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC---------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC---------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 3567999999999877 44 499999999886531 13699999 999999999999998877644444444
Q ss_pred EECCCcccC------------CCeee----ecCcC---eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCce
Q psy1095 155 IMDPRAIIS------------RPKVL----NGLEN---LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKP 215 (325)
Q Consensus 155 v~~~~~~~~------------~p~~~----~~~~~---~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 215 (325)
|........ ++.+. ..... ..+.+|+.+.|.|.+ |. +.+.|+|++..+.....
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~--p~i~W~k~g~~i~~~~~--- 150 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TD--KTIKWLKDGSIISPLNA--- 150 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SC--SCEEEEETTEECCCSSC---
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CC--CeEEEEECCEECcccCC---
Confidence 432211100 00000 00001 123489999999988 55 89999999998864322
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 216 EVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 216 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
. ...|.|.+++.+|+|.|+|.|.|..|..
T Consensus 151 ---~-------~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 ---T-------KNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ---C-------SSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ---C-------cceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 1 1379999999999999999999988765
No 173
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.86 E-value=1.3e-20 Score=151.82 Aligned_cols=182 Identities=16% Similarity=0.171 Sum_probs=120.2
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCe--------------eCCCCCcEEEEecCCeEEEEEccCCCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGK--------------PATPNARVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~--------------~~~~~~~~~~~~~~~~~~l~i~~~~~~ 131 (325)
..+...|..+.+.+|++++|.|.+.+.|.+.+.|+|+.. ......++.........+|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 455667778889999999999999999999999998531 011234666655566678999999999
Q ss_pred CCeEEEEEEEeCCeeE-EEEEEEEEECCCc-------------ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCe
Q psy1095 132 DAGLYTIKVENNYGSV-EATARLEIMDPRA-------------IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHD 197 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~-------------~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~ 197 (325)
|+|.|.|.+.+..+.. .....|.|...+. ....+.+...+....+.+|+.++|.|.+.+.+...+.
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSW 164 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSE
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCE
Confidence 9999999998765432 2234556654210 0012233344456678899999999999886632389
Q ss_pred eEEeeC--CEEeccC---------------CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEe
Q psy1095 198 ISWFRN--NRLIKLD---------------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVAN 249 (325)
Q Consensus 198 ~~W~~~--~~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 249 (325)
+.|+++ +..+..- ...+.....++ ......|.|.+++.+|+|.|.|.+.+
T Consensus 165 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 165 MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADK--SSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEG--GGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecC--CCCeEEEEECCCCcccCEEEEEEEec
Confidence 999996 3322100 00111111110 11345799999999999999999997
No 174
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.86 E-value=2e-21 Score=158.34 Aligned_cols=212 Identities=14% Similarity=0.201 Sum_probs=122.6
Q ss_pred cCCCCCCCcccccccccccccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC-----------
Q psy1095 40 ISPLSSRTFTPYSLNSAIRTRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA----------- 106 (325)
Q Consensus 40 v~~~d~G~Y~c~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~----------- 106 (325)
.+++|.+.|.|.+.+..+.. .......+...|..+.+.+|++++|.|.+.+ +.+.+.|||.. ...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~-~~~~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~ 80 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGS-GGGGGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEV 80 (270)
T ss_dssp --------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEE
T ss_pred chhhhHHHHHHHHhccCCcc-ccccceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCc
Confidence 46789999999987765532 2334567778888889999999999999864 67899999832 110
Q ss_pred -CCC---C-cEEEEe-cCCeEEEEEccCCCCCCeEEEEEEEeCC----eeEEEEEEEEEECCCcccCCCeeeec-CcCee
Q psy1095 107 -TPN---A-RVTIRE-KEDLRFLEISEVTLEDAGLYTIKVENNY----GSVEATARLEIMDPRAIISRPKVLNG-LENLR 175 (325)
Q Consensus 107 -~~~---~-~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~ 175 (325)
... . ++.+.. .....+|.|.+++.+|+|.|.|.+.+.. ........|.|........+|.+... +....
T Consensus 81 ~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~ 160 (270)
T 3qib_D 81 LQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAE 160 (270)
T ss_dssp EEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHH
T ss_pred eecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccc
Confidence 000 0 444432 2345789999999999999999998532 22233456777653322334554432 22234
Q ss_pred EecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE-----EecCCcceeEEEEEeCCCCCCC-CeEEEEEEEe
Q psy1095 176 CCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV-----QVDSKENLVIARLKIPHVYPED-EGEFTCRVAN 249 (325)
Q Consensus 176 v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~ 249 (325)
+..|+.++|.|.+.+.++....+.|+++|..+.......... ...+..+...+.|.|.....+| .|.|+|.+.|
T Consensus 161 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~ 240 (270)
T 3qib_D 161 ISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQF 240 (270)
T ss_dssp HHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEE
T ss_pred cccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEe
Confidence 456999999999998444314899999999886432111000 0012233345678898887777 9999999998
Q ss_pred CCCc
Q psy1095 250 ELGE 253 (325)
Q Consensus 250 ~~~~ 253 (325)
....
T Consensus 241 ~~l~ 244 (270)
T 3qib_D 241 YGLS 244 (270)
T ss_dssp CCBC
T ss_pred cCCC
Confidence 7543
No 175
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.86 E-value=5e-21 Score=153.78 Aligned_cols=187 Identities=16% Similarity=0.247 Sum_probs=127.6
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEee----------------CCeeCCCC---CcEEEEe-cCCeEEEEEc
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSK----------------DGKPATPN---ARVTIRE-KEDLRFLEIS 126 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~----------------~~~~~~~~---~~~~~~~-~~~~~~l~i~ 126 (325)
.+...|....+.+|++++|.|.+.+.+.+.+.||| ++...... .++.+.. .....+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 46677888889999999999999988999999998 22222211 3555543 2456789999
Q ss_pred cCCCCCCeEEEEEEEeCCe----eEEEEEEEEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEe
Q psy1095 127 EVTLEDAGLYTIKVENNYG----SVEATARLEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWF 201 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~ 201 (325)
+++.+|+|.|.|.+.+..+ .......|.|........+|.+... +....+..|+.++|.|.+.+.+++...+.|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 9999999999999986532 2223456777653222234554433 2333455699999999999977632489999
Q ss_pred eCCEEeccCCCCceEEEe-----cCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCCc
Q psy1095 202 RNNRLIKLDSDMKPEVQV-----DSKENLVIARLKIPHVYPED-EGEFTCRVANELGE 253 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 253 (325)
+++..+............ .+..+...+.|.|.....+| .|.|+|.|.|....
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 999888643211100000 12233344679999888888 99999999987644
No 176
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=6.2e-21 Score=152.37 Aligned_cols=183 Identities=15% Similarity=0.135 Sum_probs=128.0
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..+|.|...|.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+..... ..........|.|.+++.+|+|.|+|.+.+
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEec
Confidence 357888888877 7999999999999864 4568999999876531000 000123456799999999999999999987
Q ss_pred CCee--EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec
Q psy1095 143 NYGS--VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD 220 (325)
Q Consensus 143 ~~~~--~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 220 (325)
..+. ....+.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+. + +.+.|+|++..+... .. ..
T Consensus 82 ~~~~s~~S~~~~L~V~~~---~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~--~~~~w~k~g~~~~~~----~~--~~ 148 (242)
T 1p6f_A 82 GELWSEPSNLLDLVVTEM---YDTPTLSVHP-GPEVISGEKVTFYCRLDTA-T--SMFLLLKEGRSSHVQ----RG--YG 148 (242)
T ss_dssp TTEECCCCCCEEEEEECC---SCCCEEEEES-CSEEETTCEEEEEEECTTS-C--SEEEEEECSSSCEEE----EE--EC
T ss_pred CCccccCCcceEEEeecc---cCCCceEccC-CCccCCCCcEEEEEecCCC-C--CEEEEEECCCccCcc----cc--CC
Confidence 5442 234566777643 1346665544 4568899999999998643 3 689999998765431 00 11
Q ss_pred CCcceeEEEEEeCCCCCCCCeEEEEEEEeCC---CcEEeEEEEEEEee
Q psy1095 221 SKENLVIARLKIPHVYPEDEGEFTCRVANEL---GEVVTSACLIVDVV 265 (325)
Q Consensus 221 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~~l~v~~~ 265 (325)
. ....|.|.+++.+|+|.|+|.+.|.. ...+..+.|.|...
T Consensus 149 ~----~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 149 K----VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp S----SEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred C----ceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 1 34689999999999999999999864 23344566766543
No 177
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.86 E-value=1e-20 Score=149.60 Aligned_cols=183 Identities=16% Similarity=0.275 Sum_probs=124.7
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C----------------CCCCcEEEEec--CCeEEEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A----------------TPNARVTIREK--EDLRFLE 124 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~----------------~~~~~~~~~~~--~~~~~l~ 124 (325)
..|.+..+.+|++++|.|.+.+.+ .+.+.|+|+. .. + ....++.+..+ .+..+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (222)
T 1q9r_B 5 VESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQ 84 (222)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred ecCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEE
Confidence 345567799999999999998765 6789999853 11 0 01245555543 3457899
Q ss_pred EccCCCCCCeEEEEEEEeCCe-----eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCC-e
Q psy1095 125 ISEVTLEDAGLYTIKVENNYG-----SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDH-D 197 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~-~ 197 (325)
|.+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.++|.|.+.+. |. + .
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~--p~~ 160 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK--TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE--PVT 160 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC--CBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSS--CCE
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCC--CCCCeEEEccccccccCCCcEEEEEEEccEECC--CCE
Confidence 999999999999999987643 12233466665422 234565544433345689999999999986 65 5 9
Q ss_pred eEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 198 ISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 198 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
+.|++++..+.... ......++ .+...+.|.|.++..+| |.|+|.|.|..+.......+
T Consensus 161 v~W~~~g~~~~~~~--~~~~~~~~-~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 161 VTWNSGSLSSGVHT--FPAVLQSD-LYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp EEEGGGTBCTTEEE--EEEEEETT-EEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEecCCeEcceEe--ccccccCC-cEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 99999987653210 01111122 33345689999999999 99999999998876554443
No 178
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.86 E-value=9.4e-23 Score=162.54 Aligned_cols=186 Identities=13% Similarity=0.169 Sum_probs=105.1
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCe--eC------------CCCCcEEEEecCCeEEEEEccCCC
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGK--PA------------TPNARVTIREKEDLRFLEISEVTL 130 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~ 130 (325)
.+.+...|....+.+|++++|.|.+.+.|.+.+.|+|++. .. ....++.....+...+|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 4566777888889999999999999888778899998532 11 001233322223345799999999
Q ss_pred CCCeEEEEEEEeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEecc
Q psy1095 131 EDAGLYTIKVENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKL 209 (325)
Q Consensus 131 ~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~ 209 (325)
+|+|.|.|.+.+..+.. .....|.|... ..+|.+........+..|+.++|.|.+.+.+++...+.|++++..+..
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 179 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRA---DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 179 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CC---CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----C
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCC---CCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCC
Confidence 99999999998765422 12234555432 124665554433334479999999999986553247999999987654
Q ss_pred C-CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 210 D-SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 210 ~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
. ..........+..+...+.|.|.....+|+|.|+|.|.|....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 180 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 3 1000000011112334568999999999999999999997543
No 179
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.86 E-value=1.5e-20 Score=147.72 Aligned_cols=172 Identities=19% Similarity=0.280 Sum_probs=117.1
Q ss_pred EecCCceEecCCCeEEEEEEEEec-------CCCeeEEeeCCee------C-----------CCCCcEEEEec--CCeEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQ-------PAPWTSWSKDGKP------A-----------TPNARVTIREK--EDLRF 122 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~-------p~~~v~W~~~~~~------~-----------~~~~~~~~~~~--~~~~~ 122 (325)
...|..+.+.+|++++|.|.+.+. +.+.+.|+|++.. + ....++.+..+ .+..+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 455777889999999999998754 5678999998642 1 11235544332 23457
Q ss_pred EEEccCCCCCCeEEEEEEEeCCeeEE----EEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec----CCC
Q psy1095 123 LEISEVTLEDAGLYTIKVENNYGSVE----ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV----PPN 194 (325)
Q Consensus 123 l~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~----~~~ 194 (325)
|.|.+++.+|+|.|.|.+.+..+... ..+.|.|...+ ..|.+... ..+.+|+.++|.|.+.+. |+
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~---~~p~i~~~---~~~~~G~~v~L~C~~~~~~~~~p~- 156 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI---EKPDIHFL---EPLESGRPTRLSCSLPGSCEAGPP- 156 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC---CCCEEC-----CCCCTTCCEEEEEECTTCCSCSSC-
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC---CCCceecC---ccccCCCeEEEEEEeccCCCCCCC-
Confidence 99999999999999999988753221 35677777642 23444331 126689999999999764 44
Q ss_pred CCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 195 DHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 195 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
+.+.|++++..+..... ...+.|.|..+..+|.|.|+|.|.|..+.......+
T Consensus 157 -p~v~W~~~~~~~~~~~~------------~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v 209 (214)
T 2zg1_A 157 -LTFSWTGNALSPLDPET------------TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209 (214)
T ss_dssp -CEEEEESSTTSSSCSSC------------CCSSEEEECCCTTCCSCEEEEEEECC----CCEEEE
T ss_pred -ceEEEeCCCCccCCCCc------------eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEE
Confidence 89999998854321110 022489999999999999999999976544433333
No 180
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.86 E-value=1e-20 Score=152.02 Aligned_cols=182 Identities=18% Similarity=0.234 Sum_probs=119.4
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecC-----CCeeEEeeCC--ee---C---------CCCCcEEEEecCCeEEEEEcc
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQP-----APWTSWSKDG--KP---A---------TPNARVTIREKEDLRFLEISE 127 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~~~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~ 127 (325)
.+...|..+.+.+|++++|.|.+.+.| .+.+.|+|+. .. + ....++.+.......+|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 456678888899999999999998877 6899999842 11 1 013466665556667899999
Q ss_pred CCCCCCeEEEEEEEeCCee-EEEEEEEEEECCCcc-------cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeE
Q psy1095 128 VTLEDAGLYTIKVENNYGS-VEATARLEIMDPRAI-------ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDIS 199 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~-------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~ 199 (325)
++.+|+|.|.|.+.+..+. ......|.|...+.. ..++.....+....+.+|+.++|.|.+.+.+++.+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 9999999999999876543 222356666553210 00122233333456889999999999998753227899
Q ss_pred EeeCC--EEec----cC--C---------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeC
Q psy1095 200 WFRNN--RLIK----LD--S---------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANE 250 (325)
Q Consensus 200 W~~~~--~~~~----~~--~---------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 250 (325)
|++++ ..+. .. . ..+.....+ .......|.|.+++.+|+|.|.|.+.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLD--TSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEE--GGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEe--cCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99953 2110 00 0 011111110 0113468999999999999999999985
No 181
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.86 E-value=4.6e-21 Score=155.05 Aligned_cols=176 Identities=19% Similarity=0.249 Sum_probs=118.5
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeCC----------------CCCcEEEEec--CCeEEEEEcc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPAT----------------PNARVTIREK--EDLRFLEISE 127 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~~----------------~~~~~~~~~~--~~~~~l~i~~ 127 (325)
..|....+.+|++|+|.|.+.+.| .+.+.|+|++ ..+. ...++.+... ....+|.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (257)
T 1f3r_B 5 LESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNS 84 (257)
T ss_dssp EEECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEES
T ss_pred ECCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 445556799999999999998875 6889999852 1110 1246665542 4567899999
Q ss_pred CCCCCCeEEEEEEEeCCe-------e--EEEEEEEEEECCCcc---------cCCCeeeecCcCeeEecCCcEEEEEEEE
Q psy1095 128 VTLEDAGLYTIKVENNYG-------S--VEATARLEIMDPRAI---------ISRPKVLNGLENLRCCDGDSVTFECQVQ 189 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~-------~--~~~~~~l~v~~~~~~---------~~~p~~~~~~~~~~v~~g~~v~l~C~~~ 189 (325)
++.+|+|.|.|.+.+..| . ......|.|...+.. ..++.+...+....+.+|+.++|.|.+.
T Consensus 85 v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~ 164 (257)
T 1f3r_B 85 LQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGS 164 (257)
T ss_dssp CCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECS
T ss_pred CCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEEC
Confidence 999999999999998742 1 123456777654210 0112233334455678999999999998
Q ss_pred ecCCCCCeeEEee--CCEEecc----C------CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 190 VVPPNDHDISWFR--NNRLIKL----D------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 190 ~~~~~~~~~~W~~--~~~~~~~----~------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
+.++ +.+.|++ ++..+.. . ...+......+ ....|.|.+++.+|+|.|.|.|.|..
T Consensus 165 ~~~~--~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 165 QNIN--NYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSG----TDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp SCCB--TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEB----TEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CcCC--CcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCC----CEEEEEECCCChhhCEEEEEEEeCCC
Confidence 8877 7899999 5543210 0 01111111111 34689999999999999999999864
No 182
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.86 E-value=1.5e-20 Score=150.19 Aligned_cols=178 Identities=13% Similarity=0.212 Sum_probs=118.8
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee---------------CCCCCcEEEEe-cCCeEEEEEccC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP---------------ATPNARVTIRE-KEDLRFLEISEV 128 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~---------------~~~~~~~~~~~-~~~~~~l~i~~~ 128 (325)
.+...|..+.+.+|++++|.|. .+.|.+.+.|+|+. .. .....++.+.. .....+|.|.++
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 4566788888999999999999 67888999999852 11 01123555543 234567999999
Q ss_pred CCCCCeEEEEEEEeCCee-----EEEEEEEEEECCCccc------CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCe
Q psy1095 129 TLEDAGLYTIKVENNYGS-----VEATARLEIMDPRAII------SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHD 197 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~------~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~ 197 (325)
+.+|+|.|.|.+.+..+. ......|.|...+... ..+.+...+....+.+|+.++|.|.+.+.+. +.
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~--~~ 158 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAF--DY 158 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTC--CE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCC--Cc
Confidence 999999999999886542 1123466666542100 0114444455667899999999999998887 89
Q ss_pred eEEeeCCE-----Eec---------cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 198 ISWFRNNR-----LIK---------LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 198 ~~W~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
+.|++++. .+. ...++... .+ .......|.|.+++.+|+|.|+|.|.|..
T Consensus 159 i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 159 FPWYQQFPGEGPALLISILSVSDKKEDGRFTIF--FN--KREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEEEECTTSCCEEEEEEETTCSEEEETTEEEE--EE--TTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEEEECCCCCCEEEEEEccCCCcccCCceEEE--ec--CCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99999641 110 00111100 00 00124689999999999999999999974
No 183
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.86 E-value=7.6e-21 Score=148.97 Aligned_cols=179 Identities=16% Similarity=0.232 Sum_probs=121.3
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeCC----------------CCCcEEEEec--CCeEEEEEcc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPAT----------------PNARVTIREK--EDLRFLEISE 127 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~~----------------~~~~~~~~~~--~~~~~l~i~~ 127 (325)
..|....+.+|++++|.|.+.+.+ .+.+.|+|++ .... ...++.+... .+..+|.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 84 (210)
T 3d9a_H 5 QESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNS 84 (210)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ecCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECC
Confidence 346667899999999999998865 4789999852 2110 1245655432 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCC-eeEEeeCCE
Q psy1095 128 VTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDH-DISWFRNNR 205 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~-~~~W~~~~~ 205 (325)
++.+|+|.|.|.+.+.. .......|.|.... ..+|.+........+..|+.+.|.|.+.+. |. + .+.|++++.
T Consensus 85 v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~--p~~v~W~~~~~ 159 (210)
T 3d9a_H 85 VTTEDTATYYCANWDGD-YWGQGTLVTVSAAK--TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE--PVTVTWNSGSL 159 (210)
T ss_dssp CCGGGCEEEEEEETTSS-CBCCCEEEEECCCC--CBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSS--CCEEEEGGGTB
T ss_pred CCcccCEEEEEEEecCc-ccccceEEEeccCC--CCCCEEEEecCCcccccCCcEEEEEEEeeEecC--CcEEEEeeCCc
Confidence 99999999999998753 11223456665321 234555544433456789999999999987 55 5 999999887
Q ss_pred EeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE
Q psy1095 206 LIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 257 (325)
.+......... .. ..+...+.|.|.++..+| |.|+|.|.|..+.....
T Consensus 160 ~~~~~~~~~~~--~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 160 SSGVHTFPAVL--QS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CTTEEECCCEE--ET-TEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccceEEcCCcc--CC-CcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 54221111111 11 223345679999988877 99999999998876543
No 184
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.86 E-value=3.4e-20 Score=147.00 Aligned_cols=188 Identities=14% Similarity=0.228 Sum_probs=121.2
Q ss_pred EecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C---C-----------CCCcEEEEec--CCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A---T-----------PNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~---~-----------~~~~~~~~~~--~~~~~l~i 125 (325)
...|....+.+|++++|.|.+.+.+ .+.+.|||++ .. + . ...++.+..+ .+..+|.|
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (227)
T 1mju_H 4 LQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQL 83 (227)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEE
Confidence 3456677899999999999998866 6789999853 21 1 0 0245555432 35678999
Q ss_pred ccCCCCCCeEEEEEEEeCCee-EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC
Q psy1095 126 SEVTLEDAGLYTIKVENNYGS-VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN 204 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~ 204 (325)
.+++.+|+|.|.|.+.+.... ......|.|...+ ..+|.+........+..|+.++|.|.+.+..+....+.|++++
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 161 (227)
T 1mju_H 84 SSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK--TTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGS 161 (227)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSC--CBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCC--CCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCC
Confidence 999999999999999876432 1233567776521 1345554433333566899999999999863321499999998
Q ss_pred EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 205 RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
..+......... .. ..+...+.|.|..+..+| |.|+|.|.|..........+.+
T Consensus 162 ~~~~~~~~~~~~--~~-g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~ 215 (227)
T 1mju_H 162 LSSGVHTFPAVL--QS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEP 215 (227)
T ss_dssp BCTTEEECCCEE--ET-TEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred CcCCcEECCcee--cC-CeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCC
Confidence 764211111111 11 233345689999998888 9999999998766555544433
No 185
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.85 E-value=2.9e-20 Score=150.16 Aligned_cols=184 Identities=17% Similarity=0.288 Sum_probs=123.6
Q ss_pred EecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC------C-----------CCCcEEEEec--CCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA------T-----------PNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~------~-----------~~~~~~~~~~--~~~~~l~i 125 (325)
+..|....+.+|++++|.|.+.+.| .+.+.|+|++ ..+ . ...++.+... .+..+|.|
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (256)
T 1nqb_A 4 LQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQL 83 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEE
Confidence 3556778899999999999998765 6789999842 211 0 1245655542 44678999
Q ss_pred ccCCCCCCeEEEEEEEeCCee-----EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCC---Ce
Q psy1095 126 SEVTLEDAGLYTIKVENNYGS-----VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPND---HD 197 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~---~~ 197 (325)
.+++.+|+|.|.|.+.+..+. ....+.|.|... |.+...+....+.+|+.++|.|.+.+.+++. +.
T Consensus 84 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~------~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 157 (256)
T 1nqb_A 84 SSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD------IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTY 157 (256)
T ss_dssp CSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCC------CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBC
T ss_pred CcCChhhCEEEEEEEeeccCccceeEEcCceeeeeccc------ccEEecCcEEEEecCCcEEEEeEecCcccccccceE
Confidence 999999999999999887441 223456666543 4444555556788999999999998877621 28
Q ss_pred eEEee--CCEEecc----------CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE-EeEEEEEE
Q psy1095 198 ISWFR--NNRLIKL----------DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV-VTSACLIV 262 (325)
Q Consensus 198 ~~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v 262 (325)
+.|+| ++..+.. ....+......+ ....|.|.+++.+|+|.|+|.+.+..... .....|.|
T Consensus 158 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V 231 (256)
T 1nqb_A 158 LEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG----TDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI 231 (256)
T ss_dssp EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccC----CEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEE
Confidence 99999 5543310 001111111111 34689999999999999999998854322 22344555
No 186
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.85 E-value=5e-20 Score=145.36 Aligned_cols=181 Identities=17% Similarity=0.319 Sum_probs=123.8
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C--------------CCCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A--------------TPNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++|+|.|.+.+.+ .+.+.|||.. .. + ....++.+..+ .+..+|.|.
T Consensus 5 ~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (220)
T 2fbj_H 5 LESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMS 84 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEEC
T ss_pred ecCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEEC
Confidence 345567899999999999998765 5789999853 11 1 01246666543 345789999
Q ss_pred cCCCCCCeEEEEEEEeCCee---EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEee
Q psy1095 127 EVTLEDAGLYTIKVENNYGS---VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWFR 202 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~ 202 (325)
+++.+|+|.|.|.+.+..+. ......|.|...+ ..+|.+.... ...+..|+.++|.|.+.+..+. .+.+.|++
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 85 KVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES--ARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSC--CBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred CCChhhCEEEEEEEeccccccceecCCEEEEecCCC--CCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 99999999999999886442 2234567776532 1345555443 3345689999999999987432 36899999
Q ss_pred CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 203 NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
++..+..... ... ...+..+...+.|.|.....+|.|.|+|.|.|..+...
T Consensus 162 ~~~~~~~~~~-~~~-~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 162 SGKDITTVNF-PPA-LASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSCEEEEC-CCE-ECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEecceEec-Cce-ECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 9876521100 001 11222333446799999999999999999999987654
No 187
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.85 E-value=1.3e-21 Score=154.64 Aligned_cols=181 Identities=17% Similarity=0.238 Sum_probs=120.2
Q ss_pred CceEecCCCeEEEEEEEEecCC-----CeeEEeeCCeeC-------------CCCCcEEEEe---cCCeEEEEEccCCCC
Q psy1095 73 HNKICDLGDTVRFQCSVTGQPA-----PWTSWSKDGKPA-------------TPNARVTIRE---KEDLRFLEISEVTLE 131 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~~p~-----~~v~W~~~~~~~-------------~~~~~~~~~~---~~~~~~l~i~~~~~~ 131 (325)
.++.+.+|++++|.|.+.+.|. +.+.|++++... ....+..+.. ..+..+|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3456889999999999887653 689999986432 1112322221 112456999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEE-EecCCCCCeeEEeeC-CEEecc
Q psy1095 132 DAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQV-QVVPPNDHDISWFRN-NRLIKL 209 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~~~~~~~~~W~~~-~~~~~~ 209 (325)
|+|.|+|.+.+.. .....+.|.|... ...|.+...+ ...+.+|+.+.|.|.+ .+.|. +.+.|+++ +..+..
T Consensus 83 D~G~Y~C~~~~~~-~~~~~~~l~V~~~---~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~--~~v~W~~~~~~~~~~ 155 (222)
T 4i0k_A 83 DEGSYTCFVSIQD-FDSAAVSLQVAAP---YSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPE--AEVFWKDGQGVPLTG 155 (222)
T ss_dssp GCSCEEEEEEECC-CCCCCCCCCCCBC---CCCCEEECCC------CCSEEEEEEEEEEEBSC--CEEEEECTTSCBCCS
T ss_pred cCEEEEEEEEeCC-CceEEEEEEEEcC---CCCCcEEeCC-CceecCCceEEEEEecccccCC--CeEEEEcCCCccCCC
Confidence 9999999998753 3334445555543 1235554433 3467789999999999 77777 89999994 443322
Q ss_pred CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 210 DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
... ....... ......|.|.+++.+|.|.|+|.|.|..|.....+.|.|..
T Consensus 156 ~~~--~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 156 NVT--TSQMANE--RGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp EEE--EEEEECT--TSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred Ccc--eeEEcCC--CCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeC
Confidence 111 1111111 11335688999999999999999999999999888888843
No 188
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.85 E-value=1.2e-19 Score=146.58 Aligned_cols=203 Identities=13% Similarity=0.208 Sum_probs=130.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C--------------CCCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A--------------TPNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~ 126 (325)
..+....+.+|++|+|.|.+.+.+ .+.+.|||.. .. + ....++.+... ....+|.|.
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 86 (256)
T 3umt_A 7 QQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELR 86 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred EccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEEC
Confidence 345556799999999999998765 6789999732 11 0 01235554432 345679999
Q ss_pred cCCCCCCeEEEEEEEeC----CeeEEEEEEEEEECCCc----------ccCCCeeeecCcCeeEecCCcEEEEEEEEecC
Q psy1095 127 EVTLEDAGLYTIKVENN----YGSVEATARLEIMDPRA----------IISRPKVLNGLENLRCCDGDSVTFECQVQVVP 192 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~~~~----------~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~ 192 (325)
+++.+|+|.|.|.+.+. .+.......|.|...+. ...++.+...+....+.+|+.++|.|.+.+.+
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 166 (256)
T 3umt_A 87 SLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDI 166 (256)
T ss_dssp SCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCC
T ss_pred CCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCC
Confidence 99999999999999876 23333445667764210 01145666666667889999999999998877
Q ss_pred CCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeecCC
Q psy1095 193 PNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKDLTS 272 (325)
Q Consensus 193 ~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 272 (325)
. +.+.|++.... .. ..+.+.. +. . .....
T Consensus 167 ~--~~v~W~k~~~~----~~---------------~~~~~~~----~~-~-------------------------~~~~~ 195 (256)
T 3umt_A 167 G--SNLNWLQQKPD----GT---------------IKRLIYA----TS-S-------------------------LDSGV 195 (256)
T ss_dssp T--TCEEEEEECTT----CC---------------EEEEEET----TT-E-------------------------ECTTS
T ss_pred C--cEEEEEEECCC----CC---------------cEEEEEe----cc-c-------------------------cCCcc
Confidence 6 68999984310 00 0111110 00 0 00001
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEE-eEEEEEEeccc
Q psy1095 273 DGRLNIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDS-CYASVAVEGRK 323 (325)
Q Consensus 273 ~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p 323 (325)
.+++.........+|.|.++..+|+|.|+|.|.|..+... ..+.|.|++.+
T Consensus 196 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 196 PKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred CCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 2334444456667899999999999999999999765433 34788887654
No 189
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.85 E-value=5.4e-20 Score=149.23 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=122.4
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecC------CCeeEEeeC--CeeC------------CCCCcEEEEecCCeEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQP------APWTSWSKD--GKPA------------TPNARVTIREKEDLRFL 123 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p------~~~v~W~~~--~~~~------------~~~~~~~~~~~~~~~~l 123 (325)
..+.+...|..+.+.+|++|+|.|.+.+.+ .+.+.|+|+ +..+ ....++.+.......+|
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 83 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL 83 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence 346777888888999999999999998776 678999985 2211 01346666555566789
Q ss_pred EEccCCCCCCeEEEEEEEeCCee-EEEEEEEEEECCCc-------------ccCCCeeeecCcCeeEecCCcEEEEEEEE
Q psy1095 124 EISEVTLEDAGLYTIKVENNYGS-VEATARLEIMDPRA-------------IISRPKVLNGLENLRCCDGDSVTFECQVQ 189 (325)
Q Consensus 124 ~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~-------------~~~~p~~~~~~~~~~v~~g~~v~l~C~~~ 189 (325)
.|.+++.+|+|.|.|.+.+..+. ......|.|...+. ...++.....+....+.+|+.++|.|.+.
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 163 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKAS 163 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEE
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEe
Confidence 99999999999999999876432 22335677765421 00011112223345688999999999998
Q ss_pred ecCCCCCeeEEeeCC--EE---ec---cCC---------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeC
Q psy1095 190 VVPPNDHDISWFRNN--RL---IK---LDS---------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANE 250 (325)
Q Consensus 190 ~~~~~~~~~~W~~~~--~~---~~---~~~---------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 250 (325)
+.+...+.+.|+++. .. +. ... ..+.....+ .......|.|.+++.+|+|.|.|.+.|.
T Consensus 164 ~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 164 GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVD--TSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEE--TTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEc--CCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 776422689999863 21 11 000 011111111 0113468999999999999999999985
No 190
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.85 E-value=5.2e-20 Score=148.77 Aligned_cols=179 Identities=16% Similarity=0.230 Sum_probs=116.9
Q ss_pred ecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KPA------------TPNARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
..|....+.+|++|+|.|.+.+. +.+.+.|+|+. ... ....++.....+...+|.|.+++.+|+
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDE 86 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhC
Confidence 34556779999999999999876 77899999842 111 123466666556667899999999999
Q ss_pred eEEEEEEEeCCe---eEEEEEEEEEECCCccc---------------CCCeeeecCcCeeEecCCcEEEEEEEEecCCCC
Q psy1095 134 GLYTIKVENNYG---SVEATARLEIMDPRAII---------------SRPKVLNGLENLRCCDGDSVTFECQVQVVPPND 195 (325)
Q Consensus 134 G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~---------------~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~ 195 (325)
|.|+|.+.+..+ .......|.|...+... ..+.+.. +....+.+|+.++|.|.+.+.+...
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~ 165 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTFSS 165 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGG
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-CCCeEEcCCCeEEEEEEEeCCcccc
Confidence 999999988543 22234566666543110 0123333 3345688999999999998876323
Q ss_pred CeeEEeeC--CEEec------cCC---------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 196 HDISWFRN--NRLIK------LDS---------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 196 ~~~~W~~~--~~~~~------~~~---------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
+.+.|+++ +..+. ... ..+.....++ ......|.|.+++.+|+|.|.|.+.|..
T Consensus 166 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 166 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDN--SKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp SEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEET--TTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecC--CCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 89999986 32210 000 0011111111 1134579999999999999999999864
No 191
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.85 E-value=2.6e-19 Score=140.40 Aligned_cols=153 Identities=24% Similarity=0.347 Sum_probs=110.4
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCC-CCCCCeE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHV-YPEDEGE 242 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~ 242 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+...... ......+ ....|.|.++ +.+|+|.
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~--~~v~W~k~~~~~~~~~~~-~~~~~~~----~~~~L~i~~v~~~~d~G~ 78 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPR--PKIVWNKKGKKVSNQRFE-VIEFDDG----SGSVLRIQPLRTPRDEAI 78 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESC--CEEEEEETTEECCCTTEE-EEEEGGG----TEEEEEECSCCTTTTCEE
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCC--CEEEEEECCcCCCCCcee-EEEEcCC----CceEEEEeccCCCCCCeE
Confidence 467777777888999999999999999888 899999999988643321 1111111 2468999999 5999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC------e--------ecC-----------------------------C---CCce
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG------K--------DLT-----------------------------S---DGRL 276 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~------~--------~~~-----------------------------~---~~~~ 276 (325)
|+|.+.|..+.....+.|.|..... . .+. . .+++
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~ 158 (212)
T 2yd6_A 79 YECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRI 158 (212)
T ss_dssp EEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCE
T ss_pred EEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceE
Confidence 9999999998877777777743210 0 000 0 0111
Q ss_pred EEEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeE-EEEEEeccc
Q psy1095 277 NIITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCY-ASVAVEGRK 323 (325)
Q Consensus 277 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 323 (325)
..........|.|.++..+|+|.|+|.|.|..|....+ +.|.|...|
T Consensus 159 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 159 KQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 22222345789999999999999999999999987655 788887765
No 192
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.85 E-value=6.7e-20 Score=148.11 Aligned_cols=184 Identities=14% Similarity=0.216 Sum_probs=124.9
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEe--cCCCeeEEeeCC--eeC-----------------CCCCcEEEEe--cCCe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTG--QPAPWTSWSKDG--KPA-----------------TPNARVTIRE--KEDL 120 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~--~p~~~v~W~~~~--~~~-----------------~~~~~~~~~~--~~~~ 120 (325)
.+|.+...+..+.+.+|++|+|.|.+.+ .+.+.+.|+|.. ... ....++.+.. ....
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 4667788888999999999999999987 367789999732 110 1123566553 3446
Q ss_pred EEEEEccCCCCCCeEEEEEEEeC------------CeeEEEEEEEEEECCCccc---------CCCeeeecCcCeeEecC
Q psy1095 121 RFLEISEVTLEDAGLYTIKVENN------------YGSVEATARLEIMDPRAII---------SRPKVLNGLENLRCCDG 179 (325)
Q Consensus 121 ~~l~i~~~~~~d~G~Y~C~~~~~------------~~~~~~~~~l~v~~~~~~~---------~~p~~~~~~~~~~v~~g 179 (325)
.+|.|.+++.+|+|.|.|.+.+. .........|.|...+... .++.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 78999999999999999999876 2233345567776542210 13556666677788999
Q ss_pred CcEEEEEEEEecCCCCCeeEEeeC--CEEec---cC-------CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEE
Q psy1095 180 DSVTFECQVQVVPPNDHDISWFRN--NRLIK---LD-------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRV 247 (325)
Q Consensus 180 ~~v~l~C~~~~~~~~~~~~~W~~~--~~~~~---~~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 247 (325)
+.++|.|.+.+.+.. +.+.|++. +..+. .. ...+......+ ....|.|.+++.+|+|.|.|.+
T Consensus 165 ~~v~L~C~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~~ 239 (256)
T 3juy_B 165 ERATFSCRSSHSIRS-RRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG----TDFTLTITRVEPEDFALYYCQV 239 (256)
T ss_dssp SCEEEEEEESSCCTT-CCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCSEEEEEE
T ss_pred CCEEEEEEECCCcCC-eeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccC----CEEEEEECCCCHhHCEEEEEEE
Confidence 999999999876542 68999983 22111 00 01111111122 3467999999999999999999
Q ss_pred EeCCC
Q psy1095 248 ANELG 252 (325)
Q Consensus 248 ~~~~~ 252 (325)
.|...
T Consensus 240 ~~~~~ 244 (256)
T 3juy_B 240 YGASS 244 (256)
T ss_dssp CCSSC
T ss_pred eeCCC
Confidence 88543
No 193
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.85 E-value=4.9e-20 Score=145.41 Aligned_cols=182 Identities=16% Similarity=0.275 Sum_probs=122.9
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C---CC-------------CCcEEEEec--CCeEEEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A---TP-------------NARVTIREK--EDLRFLE 124 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~---~~-------------~~~~~~~~~--~~~~~l~ 124 (325)
..|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. + .. ..++.+..+ .+..+|.
T Consensus 5 ~~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (220)
T 1pz5_B 5 EESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQ 84 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred eccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEE
Confidence 446677899999999999998765 6889999853 11 1 00 245555432 3456899
Q ss_pred EccCCCCCCeEEEEEEEeCCee---EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCC-eeE
Q psy1095 125 ISEVTLEDAGLYTIKVENNYGS---VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDH-DIS 199 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~-~~~ 199 (325)
|.+++.+|+|.|.|.+.+..+. ......|.|...+ ..+|.+........+.+|+.+.|.|.+.+. |. + .+.
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~--p~~v~ 160 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT--TTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPE--PVTVK 160 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC--CBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSS--CCEEE
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCC--CCCCeEEEcccccccCCCCcEEEEEEEEEEeCC--CeEEE
Confidence 9999999999999999886432 1134566665421 234555544433446789999999999987 65 6 999
Q ss_pred EeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEE
Q psy1095 200 WFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSAC 259 (325)
Q Consensus 200 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 259 (325)
|++++............ .. ..+...+.|.|.++..+| |.|+|.|.|..+.....+.
T Consensus 161 W~~~~~~~~~~~~~~~~--~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 161 WNYGALSSGVRTVSSVL--QS-GFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EGGGTCCTTEEECCCEE--ET-TEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCcccceEEcCCcc--cC-CeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 99987631100000000 11 223345789999988876 9999999999987655443
No 194
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.84 E-value=5.7e-19 Score=138.47 Aligned_cols=154 Identities=21% Similarity=0.341 Sum_probs=111.2
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC-CCCceEEEecCCcceeEEEEEeCCCCC-CCC
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD-SDMKPEVQVDSKENLVIARLKIPHVYP-EDE 240 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~ 240 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+... .++... ...+ ....|.|.+++. +|+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~~~~~-~~~~----~~~~L~i~~v~~~~d~ 77 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPP--PSIVWRKNGKKVSGTQSRYTVL-EQPG----GISILRIEPVRAGRDD 77 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSC--CEEEEEETTEECCTTSTTEEEE-EETT----TEEEEEESSCCTTTTC
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCC--CeEEEEECCEECCCCcceeEEE-EcCC----CeEEEEEEecCCCCcC
Confidence 4678888888889999999999999998887 899999999988632 222221 1122 236899999999 999
Q ss_pred eEEEEEEEeCCCc-EEeEEEEEEEeeCC-----eec---------CCCCce-------------EEEEeCC---------
Q psy1095 241 GEFTCRVANELGE-VVTSACLIVDVVKG-----KDL---------TSDGRL-------------NIITVGG--------- 283 (325)
Q Consensus 241 G~Y~C~~~~~~~~-~~~~~~l~v~~~~~-----~~~---------~~~~~~-------------~~~~~~~--------- 283 (325)
|.|+|.+.|..+. ....+.|.|..... +.+ ..+..+ ..+..++
T Consensus 78 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~ 157 (212)
T 2yd1_A 78 APYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPR 157 (212)
T ss_dssp SEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTT
T ss_pred ceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCe
Confidence 9999999999888 66777777744311 000 000000 0111111
Q ss_pred ----EEEEEEcCCCCCCCeEEEEEEECCCeeEEeE-EEEEEeccc
Q psy1095 284 ----TSVLTIEDITGDDSGKYQVHVSNQHGSDSCY-ASVAVEGRK 323 (325)
Q Consensus 284 ----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 323 (325)
...|.|.++..+|+|.|+|.|.|..|..... +.|.|++.+
T Consensus 158 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 158 YSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 1269999999999999999999999999876 899998765
No 195
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.84 E-value=1.9e-18 Score=133.11 Aligned_cols=172 Identities=16% Similarity=0.190 Sum_probs=121.8
Q ss_pred ecCCc-eEecCCCeEEEEEEEEecCCC--eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 70 AVPHN-KICDLGDTVRFQCSVTGQPAP--WTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 70 ~~~~~-~~v~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
..|.. ..+..|++++|.|.+ +.|.| .|+|++.+..+ .+... ......|.|.+++.+|+|.|.|.+.+..+.
T Consensus 11 ~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 84 (210)
T 1gsm_A 11 EPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRT 84 (210)
T ss_dssp ESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCc
Confidence 33433 578999999999999 88877 99999865444 22222 244567999999999999999999999888
Q ss_pred EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC---CCeeEEeeCCEEeccCCCCceEE------
Q psy1095 147 VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN---DHDISWFRNNRLIKLDSDMKPEV------ 217 (325)
Q Consensus 147 ~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~---~~~~~W~~~~~~~~~~~~~~~~~------ 217 (325)
....+.|.|..+|.. +.+ .+ ..+..|+.+ |.|.+.+.+|. .+++.|+|++..+..........
T Consensus 85 ~~~~~~ltV~~~P~~---~~i--~~--~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~ 156 (210)
T 1gsm_A 85 FQHTVQLLVYAFPNQ---LTV--SP--AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEE 156 (210)
T ss_dssp EEEEEEEEEEBCCSE---EEE--ES--SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTC
T ss_pred eEEEEEEEEEecCCC---cEE--cc--ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceeccccc
Confidence 888899999886432 121 12 145678888 99999986442 25899999999985432111011
Q ss_pred E--ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 218 Q--VDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 218 ~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
. .....+...+.|.+.....+|.+.|+|.|.+..-...
T Consensus 157 ~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~ 196 (210)
T 1gsm_A 157 PQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLE 196 (210)
T ss_dssp CSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEE
T ss_pred ccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCc
Confidence 0 0112344557788887777788899999998764433
No 196
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.84 E-value=5.3e-20 Score=145.72 Aligned_cols=181 Identities=14% Similarity=0.238 Sum_probs=120.7
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC-----------------CCCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA-----------------TPNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++++|.|.+.+.+ .+.+.|||+. ..+ ....++.+..+ .+..+|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (225)
T 1op3_H 5 VESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMH 84 (225)
T ss_dssp EEECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEEC
Confidence 345567899999999999998766 6789999853 211 01246665543 346789999
Q ss_pred cCCCCCCeEEEEEEEeCCe-----e---EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCee
Q psy1095 127 EVTLEDAGLYTIKVENNYG-----S---VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDI 198 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~-----~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~ 198 (325)
+++.+|+|.|.|.+.+..+ . ......|.|...+ ..+|.+........+..|+.+.|.|.+.+..+....+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 162 (225)
T 1op3_H 85 KMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 162 (225)
T ss_dssp SCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCS--CBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEE
T ss_pred CCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCC--CcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEE
Confidence 9999999999999988753 1 1234577777531 1235554332222356799999999999873321499
Q ss_pred EEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 199 SWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 199 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
.|++++..+..... ... ...+..+...+.|.|.++..+| |.|+|.|.|..+...
T Consensus 163 ~W~~~~~~~~~~~~-~~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 163 SWNSGALTSGVHTF-PAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp ECCTTSCCTTCEEC-CCE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred EEecCCCcCCeEec-Cce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 99998865321100 101 1122233345689999998888 999999999765443
No 197
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.84 E-value=1.6e-19 Score=145.83 Aligned_cols=182 Identities=14% Similarity=0.191 Sum_probs=121.5
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC-------------CCCCcEEEE--ecCCeEEEEEccC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA-------------TPNARVTIR--EKEDLRFLEISEV 128 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~-------------~~~~~~~~~--~~~~~~~l~i~~~ 128 (325)
..+...|....+.+|++|+|.|.+.+.|.+.+.|+|.. ... ....++.+. ......+|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 45667777888999999999999998899999999832 110 012344442 2345678999999
Q ss_pred CCCCCeEEEEEEEeCCe----eEEEEEEEEEECCC--------------cccCCCeeeecCcCeeEecCCcEEEEEEEEe
Q psy1095 129 TLEDAGLYTIKVENNYG----SVEATARLEIMDPR--------------AIISRPKVLNGLENLRCCDGDSVTFECQVQV 190 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~--------------~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~ 190 (325)
+.+|+|.|+|.+.+..+ .......|.|.... ....+|.+...+....+.+|+.++|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 99999999999988643 22234566666510 1123466677666777889999999999986
Q ss_pred cCCCCCeeEEeeCC--EEe---cc--CC--------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 191 VPPNDHDISWFRNN--RLI---KL--DS--------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 191 ~~~~~~~~~W~~~~--~~~---~~--~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
. . +.+.|++.. ..+ .. .. ..++..... ......|.|.+++.+|+|.|.|.|.|..|.
T Consensus 164 ~-~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 164 S-H--NYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRT---TQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp C-C--SEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECC---SSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred C-c--eEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeC---CCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 5 4 789999832 111 00 00 000110000 012357999999999999999999987664
No 198
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.84 E-value=1.9e-19 Score=142.25 Aligned_cols=185 Identities=16% Similarity=0.272 Sum_probs=122.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C--------------CCCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A--------------TPNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++|+|.|.+.+.+ .+.+.|||.. .. + ....++.+..+ .+..+|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (223)
T 1dee_B 5 VESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMN 84 (223)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEEC
Confidence 345677899999999999998765 4789999843 11 1 01246665542 346789999
Q ss_pred cCCCCCCeEEEEEEEeCCe------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEE
Q psy1095 127 EVTLEDAGLYTIKVENNYG------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISW 200 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W 200 (325)
+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.+.|.|.+.+..+....+.|
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 162 (223)
T 1dee_B 85 SLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS--ASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSW 162 (223)
T ss_dssp SCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC--CBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCC--CCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEe
Confidence 9999999999999987642 11233567776421 134555432222345689999999999987432149999
Q ss_pred ee-CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCC--CCCeEEEEEEEeCCCcEEeEE
Q psy1095 201 FR-NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYP--EDEGEFTCRVANELGEVVTSA 258 (325)
Q Consensus 201 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~~~~ 258 (325)
++ ++..+......... ..+..+...+.|.|..... +|.|.|+|.|.|..+......
T Consensus 163 ~~~~g~~l~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 163 KYKNNSDISSTRGFPSV--LRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EETTSCBCSCEEECCCE--EETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred EccCCCccceeEECCcc--ccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 99 88776430000000 1122333456788988776 889999999999988765543
No 199
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.84 E-value=3.1e-20 Score=146.65 Aligned_cols=182 Identities=18% Similarity=0.220 Sum_probs=116.4
Q ss_pred cCCceEecCCCeEEEEEEEEecCCC---eeEEeeCCeeCC----------------CCCcEEEE-------ecCCeEEEE
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQPAP---WTSWSKDGKPAT----------------PNARVTIR-------EKEDLRFLE 124 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~~~~~~~~----------------~~~~~~~~-------~~~~~~~l~ 124 (325)
.|..+.+.+|++|+|.|.+.+.+.+ .|+|+|++..+. ...+.... ......+|.
T Consensus 7 vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 86 (225)
T 4fmk_A 7 VLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA 86 (225)
T ss_dssp CCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE
T ss_pred eCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE
Confidence 3455678899999999999887665 479999764321 01111111 112345699
Q ss_pred EccCCCCCCeEEEEEEEeCCeeEE-EEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC
Q psy1095 125 ISEVTLEDAGLYTIKVENNYGSVE-ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRN 203 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~ 203 (325)
|.+++.+|+|.|+|.+.+..+... ....+.+... |.....+.......++.+.+.|.+.+.+++ +.+.|+++
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~-~~~~w~~~ 159 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ------PENHAEAQEVTIGPQSVAVARCVSTGGRPP-ARITWISS 159 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC------CEEEEEECCBCCSSSCEEEEEEEEEEEBSC-CEEEEECS
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeeecC------CceeecccceeecceeeeeeeeeecCCCCC-CEEEEEEC
Confidence 999999999999999987655433 3344444443 333333334445567778888877654433 88999988
Q ss_pred CEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 204 NRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
+..+..... .....+......+.|.|.++..+|+|.|+|.|.|..+.......+.+
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 160 LGGEAKDTQ---EPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp SCCEEEEEE---EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred CccccCCcc---eEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 765432111 00112222334568999999999999999999998876654444443
No 200
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.84 E-value=7.1e-20 Score=146.96 Aligned_cols=187 Identities=14% Similarity=0.276 Sum_probs=124.7
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee--------------CCCCCcEEEEe-cCCeEEEEEccCC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP--------------ATPNARVTIRE-KEDLRFLEISEVT 129 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~--------------~~~~~~~~~~~-~~~~~~l~i~~~~ 129 (325)
.+...|..+.+.+|++++|.|.+.+.+.+.+.|+|.. .. .....++.+.. .....+|.|.+++
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 4566788888999999999999998889999999832 10 00123444443 2456789999999
Q ss_pred CCCCeEEEEEEEeCC-----e-eEEEEEEEEEECCCcccCCCeeeecC-cCeeEecCCcEEEEEEEEecCCCCCeeEEee
Q psy1095 130 LEDAGLYTIKVENNY-----G-SVEATARLEIMDPRAIISRPKVLNGL-ENLRCCDGDSVTFECQVQVVPPNDHDISWFR 202 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~-----~-~~~~~~~l~v~~~~~~~~~p~~~~~~-~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~ 202 (325)
.+|+|.|.|.+.+.. . .......|.|........+|.+.... ....+..|+.+.|.|.+.+.+++...+.|++
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 999999999998822 1 22334567776532223345554332 2223455999999999998654325899999
Q ss_pred CCEEeccCCCCceEEEe-----cCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCCc
Q psy1095 203 NNRLIKLDSDMKPEVQV-----DSKENLVIARLKIPHVYPED-EGEFTCRVANELGE 253 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 253 (325)
+|..+............ .+..+...+.|.|.....+| .|.|+|.|.+....
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 163 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 99988643211100000 22233445689998888888 66999999987644
No 201
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.84 E-value=2.8e-20 Score=144.64 Aligned_cols=172 Identities=13% Similarity=0.165 Sum_probs=114.3
Q ss_pred ceEecCCCeEEEEEEEE----ecCCCeeEEeeCCeeCCC------------CCcEEEEecCCeEEEEEccCCCCCCeEEE
Q psy1095 74 NKICDLGDTVRFQCSVT----GQPAPWTSWSKDGKPATP------------NARVTIREKEDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~----~~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 137 (325)
++.+.+|+++.|.|.+. +.|.+.+.|++++..+.. ..+..+. ..+..+|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 45688999999999985 346678999999876520 1122221 223457999999999999999
Q ss_pred EEEEeCCeeE-----EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEE-ecCCCCCeeEEeeCCEEeccCC
Q psy1095 138 IKVENNYGSV-----EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQ-VVPPNDHDISWFRNNRLIKLDS 211 (325)
Q Consensus 138 C~~~~~~~~~-----~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~~~~~W~~~~~~~~~~~ 211 (325)
|.+.+..+.. ...+.|.|...+ ..|.+.... ...|+.+.|.|.+. +.|. +.+.|++++..+....
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~---~~p~~~~~~----~~~g~~~~l~C~~~~g~P~--p~i~W~k~g~~l~~~~ 152 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADF---PTPSISDFE----IPTSNIRRIICSTSGGFPE--PHLSWLENGEELNAIN 152 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCC---CCCEEEEEE----CSSTTEEEEEEEEEEESSC--EEEEEEESSCEECCSE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCC---CCCceEecc----CCCCCeEEEEEecCCccCC--CEEEEEECCEECcccc
Confidence 9999865422 456677776642 234433221 13488999999995 8887 8999999998876432
Q ss_pred CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEE
Q psy1095 212 DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSAC 259 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 259 (325)
. .......+........+. +..+|.|.|+|.|.|..+.....+.
T Consensus 153 ~-~~~~~~~~~~~~~~~~~~---v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 153 T-TVSQDPETELYAVSSKLD---FNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp E-EEEECTTTCCEEEEEEEE---EETTSCEEEEEEEEETTCCEEEEEE
T ss_pred c-eEEecCCCcEEEEEEEEE---EEecCCCEEEEEEecCcceeeeEEe
Confidence 1 111111111222223333 4458999999999999887765443
No 202
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.84 E-value=7.5e-20 Score=147.57 Aligned_cols=179 Identities=16% Similarity=0.228 Sum_probs=120.1
Q ss_pred eEecCCceEecCCCeEEEEEEEEecC--CCeeEEeeC--CeeC-----------------CCCCcEEEEec--CCeEEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKD--GKPA-----------------TPNARVTIREK--EDLRFLE 124 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~ 124 (325)
++..|.+..+.+|++|+|.|.+.+.+ .+.+.|+|. +..+ ....++.+..+ ....+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 45667788899999999999998744 678999982 2110 01235555432 3366799
Q ss_pred EccCCCCCCeEEEEEEEeCCeeE-EEEEEEEEECCC---------cccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC
Q psy1095 125 ISEVTLEDAGLYTIKVENNYGSV-EATARLEIMDPR---------AIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN 194 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~---------~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~ 194 (325)
|.+++.+|+|.|+|.+.+..+.. .....|.|.... ....++.+...+....+.+|+.++|.|.+.+.+.
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~- 162 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVD- 162 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCE-
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccc-
Confidence 99999999999999998855433 244566666420 1122456666666678899999999999988665
Q ss_pred CC----eeEEeeC--CEEec---c-------CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 195 DH----DISWFRN--NRLIK---L-------DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 195 ~~----~~~W~~~--~~~~~---~-------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
+ .+.|+++ +..+. . ....+......+ ....|.|.+++.+|+|.|.|.+.|..+
T Consensus 163 -~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 231 (253)
T 3uzq_A 163 -RYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSR----TDFTLTINPVEADDVATYFCQRSNEVP 231 (253)
T ss_dssp -ETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred -cCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCC----CEEEEEECCCCHHHCEEEEEEEccCCC
Confidence 4 8999984 22111 0 000111111111 346799999999999999999988643
No 203
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.84 E-value=1.7e-19 Score=145.77 Aligned_cols=181 Identities=15% Similarity=0.241 Sum_probs=119.2
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--e---eC-------------CCCCcEEEEec--CCeEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--K---PA-------------TPNARVTIREK--EDLRF 122 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~---~~-------------~~~~~~~~~~~--~~~~~ 122 (325)
++..+..|.+..+.+|++|+|.|.+.+. +.+.+.|+|.. . .+ ....++.+... ....+
T Consensus 8 ~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 87 (257)
T 3gkz_A 8 KEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVY 87 (257)
T ss_dssp -CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred ccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEE
Confidence 3444566777789999999999999884 47899999832 1 11 11235555432 34568
Q ss_pred EEEccCCCCCCeEEEEEEEeC----CeeEEEEEEEEEECCCc--------ccCCCeeeecCcCeeEecCCcEEEEEEEEe
Q psy1095 123 LEISEVTLEDAGLYTIKVENN----YGSVEATARLEIMDPRA--------IISRPKVLNGLENLRCCDGDSVTFECQVQV 190 (325)
Q Consensus 123 l~i~~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~~~~--------~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~ 190 (325)
|.|.+++.+|+|.|.|.+.+. .........|.|...+. ....+.+...+....+.+|+.++|.|.+.+
T Consensus 88 L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 167 (257)
T 3gkz_A 88 LQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASS 167 (257)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESS
T ss_pred EEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEcc
Confidence 999999999999999999886 22223345666654310 112355555566678899999999999988
Q ss_pred cCCCCC-eeEEeeC--CEEec---cCC-------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 191 VPPNDH-DISWFRN--NRLIK---LDS-------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 191 ~~~~~~-~~~W~~~--~~~~~---~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
.+. + .+.|++. +..+. ... ..+......+ ....|.|.+++.+|+|.|.|.+.+..
T Consensus 168 ~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 168 SVS--SSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSG----TSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp CCC--GGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred Ccc--ceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCC----CEEEEEECCCChHHCEEEEEEEccCC
Confidence 766 5 8999983 22211 000 0111111111 34679999999999999999998754
No 204
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.83 E-value=2.3e-19 Score=147.06 Aligned_cols=177 Identities=16% Similarity=0.278 Sum_probs=119.5
Q ss_pred eEecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeCC-----------------CCCcEEEEe--cCCeEEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPAT-----------------PNARVTIRE--KEDLRFLE 124 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~--~~~~~~l~ 124 (325)
+...|....+.+|++|+|.|.+.+.+ .+.+.|+|++ ..+. ...++.+.. .....+|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 45567788899999999999998764 5789999853 1110 124555544 23457899
Q ss_pred EccCCCCCCeEEEEEEEeCCe---e--EEEEEEEEEECCCcc---------cCCCeeeecCcCeeEecCCcEEEEEEEEe
Q psy1095 125 ISEVTLEDAGLYTIKVENNYG---S--VEATARLEIMDPRAI---------ISRPKVLNGLENLRCCDGDSVTFECQVQV 190 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~---~--~~~~~~l~v~~~~~~---------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~ 190 (325)
|.+++.+|+|.|.|.+.+..+ . ......|.|...+.. ..++.+...+....+.+|+.++|.|.+.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 188 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASS 188 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecC
Confidence 999999999999999998754 1 123446777664310 12344555555667889999999999987
Q ss_pred cCCCCCeeEEee--CCEEecc----------CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 191 VPPNDHDISWFR--NNRLIKL----------DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 191 ~~~~~~~~~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
.+ +.+.|+| ++..+.. ....+......+ ....|.|.+++.+|+|.|.|.+.+..
T Consensus 189 ~~---~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~a~~~~ 254 (282)
T 1qok_A 189 SV---SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSG----TSYSLTISRMEAEDAATYYCQQRSSY 254 (282)
T ss_dssp CC---SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CC---ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCC----CEEEEEEccCChhHCEEEEEEEeeCC
Confidence 66 5799999 5543310 001111111111 34689999999999999999998753
No 205
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.83 E-value=1.2e-19 Score=147.61 Aligned_cols=185 Identities=16% Similarity=0.210 Sum_probs=119.3
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecC-----CCeeEEeeCC--eeC------------CCCCcEEEEecCCeEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQP-----APWTSWSKDG--KPA------------TPNARVTIREKEDLRFLE 124 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~ 124 (325)
..+.+...|....+.+|++++|.|.+.+.+ .+.+.|+|+. ... ....++.+...+...+|.
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 456777788888899999999999998766 4789999853 211 013466665555667899
Q ss_pred EccCCCCCCeEEEEEEEeCCee-EEEEEEEEEECCCccc---CCC--------------eeeecCcCeeEecCCcEEEEE
Q psy1095 125 ISEVTLEDAGLYTIKVENNYGS-VEATARLEIMDPRAII---SRP--------------KVLNGLENLRCCDGDSVTFEC 186 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~---~~p--------------~~~~~~~~~~v~~g~~v~l~C 186 (325)
|.+++.+|+|.|.|.+.+..+. ......|.|...+... .+| .....+....+.+|+.++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 9999999999999999876432 2223455665432100 011 122233456788999999999
Q ss_pred EEEecCCCCCeeEEeeC--CEEec----c-------------CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEE
Q psy1095 187 QVQVVPPNDHDISWFRN--NRLIK----L-------------DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRV 247 (325)
Q Consensus 187 ~~~~~~~~~~~~~W~~~--~~~~~----~-------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 247 (325)
.+.+.++..+.+.|+++ +..+. . ....+.....+. ......|.|.+++.+|+|.|.|.+
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~a 251 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDD--SKSSVYLQMNNLRVEDTGIYYCTG 251 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEG--GGTEEEEEECSCCGGGCEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeC--CCCEEEEEECCCCHHHCEEEEEEE
Confidence 99887643378999984 22210 0 001111111110 012367999999999999999999
Q ss_pred EeC
Q psy1095 248 ANE 250 (325)
Q Consensus 248 ~~~ 250 (325)
.+.
T Consensus 252 ~~~ 254 (268)
T 1x9q_A 252 ASY 254 (268)
T ss_dssp EET
T ss_pred ccC
Confidence 874
No 206
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.83 E-value=1.7e-20 Score=147.82 Aligned_cols=186 Identities=19% Similarity=0.225 Sum_probs=118.0
Q ss_pred CCCCeeEecCCceE--ecCCCeEEEEEEEEec---CC-CeeEEeeCCeeCCCCCcEEEEe-cC----CeEEEEEccCCCC
Q psy1095 63 TSSPRFYAVPHNKI--CDLGDTVRFQCSVTGQ---PA-PWTSWSKDGKPATPNARVTIRE-KE----DLRFLEISEVTLE 131 (325)
Q Consensus 63 ~~~p~~~~~~~~~~--v~~g~~v~l~C~~~~~---p~-~~v~W~~~~~~~~~~~~~~~~~-~~----~~~~l~i~~~~~~ 131 (325)
..+|.+.+.|.... +.+|++++|.|.+.+. |. +.|+|+|++..+.......... .+ ....|.|.+++.+
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 35677766665544 7899999999999886 33 7899999998765432111111 11 1246999999999
Q ss_pred CCeEEEEEEEeCCeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEecc
Q psy1095 132 DAGLYTIKVENNYGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKL 209 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~ 209 (325)
|+|.|+|.+.+..+.. ...+.+ ......+|.+...+.......|+.+.|.|.+.|.++....+.|++++..+..
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~----~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 162 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISK----IKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEEN 162 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECC----CCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred CCCeEEEEEECCcCCCcceEEEee----cCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccC
Confidence 9999999999876533 222211 1111234665544333222358999999999985432149999999988743
Q ss_pred CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 210 DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
....... ...+..+...+.|.|.....+|.|.|+|.|.|....
T Consensus 163 ~~~~~~~-~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 163 YKDTAPV-LDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEECCCE-ECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred ceecccE-ECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 2111111 112223334456777766666799999999997654
No 207
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.83 E-value=2.3e-20 Score=145.86 Aligned_cols=181 Identities=18% Similarity=0.187 Sum_probs=116.2
Q ss_pred eEecCCceE-ecCCCeEEEEEEEEecC----CCeeEEeeCCeeCCCCCcE-EEEecCC----eEEEEEccCCCCCCeEEE
Q psy1095 68 FYAVPHNKI-CDLGDTVRFQCSVTGQP----APWTSWSKDGKPATPNARV-TIREKED----LRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 68 ~~~~~~~~~-v~~g~~v~l~C~~~~~p----~~~v~W~~~~~~~~~~~~~-~~~~~~~----~~~l~i~~~~~~d~G~Y~ 137 (325)
++..|.... +.+|++++|.|.+.+.+ .+.|.|+|++..+...... .....++ ...|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 344555444 88999999999998874 2489999999776432100 0001111 246999999999999999
Q ss_pred EEEEeCCeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCce
Q psy1095 138 IKVENNYGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKP 215 (325)
Q Consensus 138 C~~~~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 215 (325)
|.+.+..+.. .+.+.+ ......+|.+...+.......|+.+.|.|.+.+.+++.+.+.|+++|..+........
T Consensus 85 C~a~~~~~~~~~~~~v~~----~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 160 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISK----TKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQP 160 (207)
T ss_dssp EEEECTTCSSCEEEEECC----CCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCC
T ss_pred EEEEccCCCCceEEEecc----CCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCc
Confidence 9999877642 222222 0111234665544433223358999999999986553258999999998743221111
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 216 EVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 216 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
. ...+..+...+.|.|.....+|.|.|+|.|.|....
T Consensus 161 ~-~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 161 I-MDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp E-ECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred e-ECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 1 122223344567888777777899999999997653
No 208
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.83 E-value=1.2e-19 Score=143.92 Aligned_cols=181 Identities=20% Similarity=0.294 Sum_probs=119.0
Q ss_pred ecCCceEecCCCeEEEEEEEEecCC----CeeEEeeCC--eeCC----------------CCCcEEEEec--CCeEEEEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQPA----PWTSWSKDG--KPAT----------------PNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p~----~~v~W~~~~--~~~~----------------~~~~~~~~~~--~~~~~l~i 125 (325)
..|....+.+|++++|.|.+.+.|. +.+.|+|+. ..+. ...++.+..+ .+..+|.|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (228)
T 3bae_H 5 KESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKI 84 (228)
T ss_dssp EEECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEE
T ss_pred eCCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEE
Confidence 3466778999999999999988764 789999852 2110 1235555432 24578999
Q ss_pred ccCCCCCCeEEEEEEEeCCe------e---EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCC
Q psy1095 126 SEVTLEDAGLYTIKVENNYG------S---VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPND 195 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~------~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~ 195 (325)
.+++.+|+|.|.|.+.+..+ . ......|.|...+ ..+|.+........+..|+.+.|.|.+.+. |.+
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p- 161 (228)
T 3bae_H 85 TSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK--TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEP- 161 (228)
T ss_dssp CSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC--CBCCEEEEECC-----CCSEEEEEEEEEEEBSSC-
T ss_pred cCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC--CCCCEEEEecccccccCCCCEEEEEEEccEeCCC-
Confidence 99999999999999987643 1 1123567776421 234555544333346789999999999987 541
Q ss_pred CeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE
Q psy1095 196 HDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 196 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 257 (325)
..+.|++++..+.... .... ..+..+...+.|.|..+..+| |.|+|.|.|..+.....
T Consensus 162 ~~v~W~~~~~~~~~~~--~~~~-~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 162 VTLTWNSGSLSSGVHT--FPAV-LQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp CEEEEGGGTCCTTEEE--EEEE-EETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEEEeeCCcccCceE--cCce-eCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 3999999876532110 0111 111233345689999988866 99999999998876543
No 209
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.83 E-value=1.2e-18 Score=134.11 Aligned_cols=145 Identities=21% Similarity=0.281 Sum_probs=105.0
Q ss_pred CCeeeecCcCeeEec-CCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 164 RPKVLNGLENLRCCD-GDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~-g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
+|.+.. +....+.+ |+.+.|.|.+.+.+.+.+.+.|++++..+....... ....|.|.+++.+|+|.
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----------~~~~L~i~~~~~~d~G~ 70 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----------SNMEYRINKPRAEDSGE 70 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----------SEEEEEESSCCGGGCEE
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----------ccEEEEEecCCcccCEE
Confidence 355544 33455556 999999999998875336899999999886543221 23689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC--------------------------------------eecC---CCCceEEEEe
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG--------------------------------------KDLT---SDGRLNIITV 281 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~--------------------------------------~~~~---~~~~~~~~~~ 281 (325)
|+|.+.|. +.....+.|.|...+. ..+. .++++.+...
T Consensus 71 Y~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~ 149 (190)
T 2wv3_A 71 YHCVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINK 149 (190)
T ss_dssp EEEEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEEC
T ss_pred EEEEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecC
Confidence 99999998 7777766666643221 1100 1122222223
Q ss_pred CCEEEEEEcCCC-CCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 282 GGTSVLTIEDIT-GDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 282 ~~~~~l~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
+....|.|.++. .+|+|.|+|.|.|..|....++.|.|+.
T Consensus 150 ~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~V 190 (190)
T 2wv3_A 150 ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVRV 190 (190)
T ss_dssp SSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEEC
Confidence 334579999999 7999999999999999999999999863
No 210
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.83 E-value=1.7e-19 Score=141.77 Aligned_cols=184 Identities=15% Similarity=0.167 Sum_probs=116.3
Q ss_pred EecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--ee---C-------------CCCCcEEEEecCCeEEEEEccC
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KP---A-------------TPNARVTIREKEDLRFLEISEV 128 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~---~-------------~~~~~~~~~~~~~~~~l~i~~~ 128 (325)
...|.+..+.+|++++|.|.+.+. +.+.+.|||.. .. + ....++.+....+..+|.|.++
T Consensus 3 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (215)
T 3nl4_H 3 VEESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSP 82 (215)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSC
T ss_pred eEcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCC
Confidence 345667789999999999999763 36789999742 11 1 0124666655566778999999
Q ss_pred CCCCCeEEEEEEEeCCee----EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC
Q psy1095 129 TLEDAGLYTIKVENNYGS----VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN 204 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~ 204 (325)
+.+|+|.|.|.+.+..+. ......|.|...+ ..+|.+........+..|+.++|.|.+.+.++....+.|++++
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g 160 (215)
T 3nl4_H 83 TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQ--PKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGT 160 (215)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSC--CBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CcccCEEEEEEEecCCCccceEEcCCEEEEEeCCC--cCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCC
Confidence 999999999999876432 2334456665321 2346665444444566799999999999876543678899988
Q ss_pred EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 205 RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
..+........ ...+..+...+.|.+ ...| |.|+|.|.|..+.......|
T Consensus 161 ~~~~~~~~~~~--~~~~g~~~~~s~l~v---~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 161 LTNGVRTFPSV--RQSSGLYSLSSVVSV---TSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp BCTTEEECCCE--ECTTSCEEEEEEEEE---CC----CCEEEEEEGGGTEEEEEEC
T ss_pred EECCeEecCce--ECCCCCEEEEEEEEE---eccC-CEEEEEEEeCCCCcceEEec
Confidence 75432211111 121212222233444 4456 99999999998876655444
No 211
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.83 E-value=1.1e-20 Score=147.14 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=105.1
Q ss_pred ecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEE
Q psy1095 77 CDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIM 156 (325)
Q Consensus 77 v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 156 (325)
+.+|++++|.|.+ |.+.+.|+|++..+... .....+|.|.+++.+|+|.|+|.+.+... ..+.|.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCC---CCEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCC---eeEEEEEE
Confidence 4589999999998 78899999999876421 11224599999999999999999644321 12333333
Q ss_pred CCC------------------------c-ccCCCeeeecCcCeeEe-cCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC
Q psy1095 157 DPR------------------------A-IISRPKVLNGLENLRCC-DGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD 210 (325)
Q Consensus 157 ~~~------------------------~-~~~~p~~~~~~~~~~v~-~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~ 210 (325)
... . ....+.+... ...+. +|+.+.|.|. +.|. +.+.|++++..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~v~~~G~~v~L~C~--g~p~--p~i~W~k~~~~l~~~ 155 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT--PYKVSISGTTVILTCP--QYPG--SEILWQHNDKNIGGD 155 (204)
T ss_dssp C------------------------------------CC--CCEEEEETTEEEEECS--CCCS--SCEEEEETTEEESCC
T ss_pred EeccccccccccccccccccccccccccccccccceecC--CceeeecCCcEEEEcC--CCCC--CceEEEECCEECCCc
Confidence 000 0 0001112111 22344 8999999998 6676 789999999988654
Q ss_pred CCCceEEEecCCcceeEEEEEeCCC-CCCCCeEEEEEEEeCCCcE-EeEEEEE
Q psy1095 211 SDMKPEVQVDSKENLVIARLKIPHV-YPEDEGEFTCRVANELGEV-VTSACLI 261 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~-~~~~~l~ 261 (325)
.......... ..|.|.++ +.+|+|.|+|.|.|..|.. ...+.|.
T Consensus 156 ~~~~~~~~~~-------~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 156 EDDKNIGSDE-------DHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp TTCTTEEEET-------TEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred cCCceEecCC-------CEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 3222221123 38999999 9999999999999999863 3333443
No 212
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.83 E-value=5e-19 Score=136.38 Aligned_cols=147 Identities=29% Similarity=0.476 Sum_probs=107.5
Q ss_pred CCeeeecCc--CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCe
Q psy1095 164 RPKVLNGLE--NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEG 241 (325)
Q Consensus 164 ~p~~~~~~~--~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 241 (325)
+|.+..... ...+.+|+.+.|.|.+.+.|. +.+.|++++..+....+... ...+ ..|.|.+++.+|+|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~--~~~~------~~L~i~~~~~~d~G 71 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPE--PAISWFRNGKLIEENEKYIL--KGSN------TELTVRNIINSDGG 71 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSC--CEEEEEETTEECCCSSSEEE--ETTT------TEEEECSCCGGGCE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCC--CeEEEEECCeEcCCCccEEE--eCCe------eEEEEecCChhcCc
Confidence 355544433 346678999999999998887 89999999998876543321 1222 47999999999999
Q ss_pred EEEEEEEeCCCcEEeEEEEEEEeeCCe-------------------------------------ecC-----CCCceEEE
Q psy1095 242 EFTCRVANELGEVVTSACLIVDVVKGK-------------------------------------DLT-----SDGRLNII 279 (325)
Q Consensus 242 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~-------------------------------------~~~-----~~~~~~~~ 279 (325)
.|+|.+.+..+.....+.|.|...+.. .+. .+++....
T Consensus 72 ~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 151 (192)
T 2va4_A 72 PYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVK 151 (192)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEE
T ss_pred EEEEEEEccccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEe
Confidence 999999999887776666666322211 000 01222333
Q ss_pred EeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 280 TVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 280 ~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
.......|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 152 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 152 GQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred eccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 33445689999999999999999999999999999999885
No 213
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.83 E-value=6.7e-19 Score=140.01 Aligned_cols=188 Identities=19% Similarity=0.243 Sum_probs=119.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C-------------CCCCcEEEEec--CCeEEEEEcc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A-------------TPNARVTIREK--EDLRFLEISE 127 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~-------------~~~~~~~~~~~--~~~~~l~i~~ 127 (325)
..|....+.+|++++|.|.+.+.+ .+.+.|||.. .. + ....++.+..+ .+..+|.|.+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (232)
T 1dn0_B 5 QQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSS 84 (232)
T ss_dssp EEECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred ECCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECC
Confidence 345667899999999999998764 5789999842 11 1 01246665542 3456899999
Q ss_pred CCCCCCeEEEEEEE--eCCe----eEEEEEEEEEECCCcccCCCeeeecCcCeeEecC-CcEEEEEEEEecCCCCCeeEE
Q psy1095 128 VTLEDAGLYTIKVE--NNYG----SVEATARLEIMDPRAIISRPKVLNGLENLRCCDG-DSVTFECQVQVVPPNDHDISW 200 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~--~~~~----~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g-~~v~l~C~~~~~~~~~~~~~W 200 (325)
++.+|+|.|.|.+. +..+ .......|.|...+ ..+|.+........+..| +.++|.|.+.+..+....+.|
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W 162 (232)
T 1dn0_B 85 VTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS--ASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSW 162 (232)
T ss_dssp CCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC--CBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCC--CCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEE
Confidence 99999999999997 3211 12234567776521 134555432222334578 999999999987332149999
Q ss_pred ee-CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCC--CCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 201 FR-NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYP--EDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 201 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
++ ++..+......... ..+..+...+.|.|..... +|.|.|+|.|.|..+.......+.
T Consensus 163 ~~~~g~~l~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~ 224 (232)
T 1dn0_B 163 KYKNNSDISSTRGFPSV--LRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLP 224 (232)
T ss_dssp EETTSCEECCEEECCCE--EETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECC
T ss_pred EcCCCCceeeEEECCcc--ccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecC
Confidence 99 88776531000000 1122333456899998887 889999999999988766555444
No 214
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.83 E-value=1e-19 Score=145.97 Aligned_cols=186 Identities=18% Similarity=0.311 Sum_probs=124.1
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEee--------------CCeeCCC----CCcEEEEec-CCeEEEEEc
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSK--------------DGKPATP----NARVTIREK-EDLRFLEIS 126 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~--------------~~~~~~~----~~~~~~~~~-~~~~~l~i~ 126 (325)
+.+...|....+.+|++++|.| ..+.+.+.+.||| ++..... ..++.+... ....+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4567778888899999999999 6667888999998 2211111 156655542 345689999
Q ss_pred cCCCCCCeEEEEEEEeC----CeeEEEEEEEEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEe
Q psy1095 127 EVTLEDAGLYTIKVENN----YGSVEATARLEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWF 201 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~ 201 (325)
+++.+|+|.|.|.+.+. .........|.|........+|.+... +....+..|+.+.|.|.+.+.++....+.|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 99999999999999852 223334456777653222234554432 2333455699999999999865532489999
Q ss_pred eCCEEeccCCCCceEEEe-----cCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCC
Q psy1095 202 RNNRLIKLDSDMKPEVQV-----DSKENLVIARLKIPHVYPED-EGEFTCRVANELG 252 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 252 (325)
++|..+............ .+..+...+.|.|.....+| .|.|+|.|.|...
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 999988643211100000 12233345679999888888 9999999998654
No 215
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.83 E-value=3.5e-19 Score=142.60 Aligned_cols=192 Identities=17% Similarity=0.212 Sum_probs=124.6
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--eeC--------------C---CCCcEEEEecC--CeEE
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KPA--------------T---PNARVTIREKE--DLRF 122 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~~--------------~---~~~~~~~~~~~--~~~~ 122 (325)
+.+...|..+.+.+|++++|.|.+.+. +.+.+.|+|+. ..+ . ...++.+.... +..+
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 346667778889999999999999875 56789999842 211 0 23466554332 4678
Q ss_pred EEEccCCCCCCeEEEEEEEeCC------e-eEEEEEEEEEECCCcc---cCCCeeeecCcCeeEecCCcEEEEEEEEecC
Q psy1095 123 LEISEVTLEDAGLYTIKVENNY------G-SVEATARLEIMDPRAI---ISRPKVLNGLENLRCCDGDSVTFECQVQVVP 192 (325)
Q Consensus 123 l~i~~~~~~d~G~Y~C~~~~~~------~-~~~~~~~l~v~~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~ 192 (325)
|.|.+++.+|+|.|.|.+.+.. . .......|.|...+.. ...+.+.. +....+..|+.+.|.|.+.+..
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~-p~~~~~~~g~~v~L~C~~~g~~ 160 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL-PSIAETKLQKAGTYLCLLEKFF 160 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC-CCGGGGGSSSCEEEEEEEEEES
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC-CChhhcccCCCceEEEEEeeEE
Confidence 9999999999999999998752 1 1123457777753210 01122221 2223455799999999999874
Q ss_pred CCCCeeEEeeCCE-EeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 193 PNDHDISWFRNNR-LIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 193 ~~~~~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
+..+.+.|++++. .+......... ..+..+...+.|.|..... | |.|+|.|.|..+.......+.+
T Consensus 161 P~~~~v~W~~~~~~~l~~~~~~~~~--~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 161 PDVIKIHWEEKKSNTILGSQEGNTM--KTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp SCCEEEEEEESSSCCCCCCEECCCE--ECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCCeEEEEEcCCCEeecCcccccee--cCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 4337899999986 45322111111 1222334456899987765 5 9999999999887655544443
No 216
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.83 E-value=1.1e-19 Score=145.35 Aligned_cols=186 Identities=15% Similarity=0.256 Sum_probs=123.3
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--------------eeC---CCCCcEEEEe-cCCeEEEEEcc
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--------------KPA---TPNARVTIRE-KEDLRFLEISE 127 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--------------~~~---~~~~~~~~~~-~~~~~~l~i~~ 127 (325)
+.+...|....+.+|++++|.|.+.+ +.+.+.|||.. ... ....++.+.. .....+|.|.+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 34567788888999999999999865 77899999821 111 1123555544 33467899999
Q ss_pred CCCCCCeEEEEEEEe--CC-eeEEEEEEEEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC
Q psy1095 128 VTLEDAGLYTIKVEN--NY-GSVEATARLEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWFRN 203 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~--~~-~~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~ 203 (325)
++.+|+|.|.|.+.+ .. ........|.|........+|.+... +....+..|+.+.|.|.+.+.++....+.|+++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 999999999999973 21 22333456677643222234555432 233345568999999999985443248999999
Q ss_pred CEEeccCCCCce-EEEecCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCC
Q psy1095 204 NRLIKLDSDMKP-EVQVDSKENLVIARLKIPHVYPED-EGEFTCRVANELG 252 (325)
Q Consensus 204 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 252 (325)
|..+........ .....+..+...+.|.|.....+| .|.|+|.|.|...
T Consensus 162 g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 162 GKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 998864322110 011222233345679999998888 7799999998754
No 217
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.83 E-value=9.7e-19 Score=155.20 Aligned_cols=179 Identities=14% Similarity=0.158 Sum_probs=113.2
Q ss_pred CCceEecCCCeEEEEEEEEec-C-CCeeEEeeCCeeCCCCCc--EEEEecCC----eEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 72 PHNKICDLGDTVRFQCSVTGQ-P-APWTSWSKDGKPATPNAR--VTIREKED----LRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~~-p-~~~v~W~~~~~~~~~~~~--~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
|....+.+|+.++|.|.+.+. | ...|+|++++..+..... ......++ ...|.|.....+|.|.|+|.+.|.
T Consensus 304 p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~ 383 (512)
T 1zvo_C 304 PAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHP 383 (512)
T ss_pred CChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeC
Confidence 333446689999999999885 4 248999999987652111 01111111 245889999999999999999987
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEE-EEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVT-FECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~-l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
.+... ...+..........+|.+...+... .|+.+. |.|.+.|++++...+.|+++|..+............++.
T Consensus 384 ~~~~~-~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~d 459 (512)
T 1zvo_C 384 SLPPQ-RLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPG 459 (512)
T ss_pred CCCCC-ceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCC
Confidence 65432 2222211100001234444333222 688899 999999976644689999999988654322111111221
Q ss_pred -c-ceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 223 -E-NLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 223 -~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
. +...+.|.|.....+|.|.|+|.|.|.....
T Consensus 460 g~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 460 STTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred CCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 1 3345678888888888999999999986543
No 218
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.83 E-value=3.1e-19 Score=146.03 Aligned_cols=191 Identities=15% Similarity=0.248 Sum_probs=127.6
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC-------------C----CCCcEEEEec-CCeEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA-------------T----PNARVTIREK-EDLRFL 123 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~-------------~----~~~~~~~~~~-~~~~~l 123 (325)
..+.+...|....+.+|++++|.|.+.+.+.+.+.|+|++ ... . ...++.+... ....+|
T Consensus 23 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (279)
T 2wbj_D 23 GGAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 102 (279)
T ss_dssp CCCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEE
T ss_pred ccceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEE
Confidence 3466777888889999999999999987788899999853 110 0 1245655542 456789
Q ss_pred EEccCCCCCCeEEEEEEEeCCe------eEEEEEEEEEECCCcccCCCeeeecC-cCeeEecCCcEEEEEEEEecCCCCC
Q psy1095 124 EISEVTLEDAGLYTIKVENNYG------SVEATARLEIMDPRAIISRPKVLNGL-ENLRCCDGDSVTFECQVQVVPPNDH 196 (325)
Q Consensus 124 ~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~p~~~~~~-~~~~v~~g~~v~l~C~~~~~~~~~~ 196 (325)
.|.+++.+|+|.|+|.+.+..+ .......|.|........+|.+.... ....+..|+.+.|.|.+.+.+++.+
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 182 (279)
T 2wbj_D 103 TVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 182 (279)
T ss_dssp EESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCE
T ss_pred EEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCc
Confidence 9999999999999999988321 11233567776532222345554332 2223447899999999998755336
Q ss_pred eeEEeeCCEEeccCCCCce-EEE----ecCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCCcE
Q psy1095 197 DISWFRNNRLIKLDSDMKP-EVQ----VDSKENLVIARLKIPHVYPED-EGEFTCRVANELGEV 254 (325)
Q Consensus 197 ~~~W~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~ 254 (325)
.+.|++++..+........ ... ..+..+...+.|.|......| .|.|+|.|.|.....
T Consensus 183 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 183 ELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 9999999988754321100 000 012233445679998887764 778999999976543
No 219
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.83 E-value=2.3e-20 Score=147.42 Aligned_cols=178 Identities=20% Similarity=0.257 Sum_probs=119.4
Q ss_pred cCCceEecCCCeEEEEEEEEe-cCCCe----eEEeeCCeeCCC-------------CCcEEEEe-----cCCeEEEEEcc
Q psy1095 71 VPHNKICDLGDTVRFQCSVTG-QPAPW----TSWSKDGKPATP-------------NARVTIRE-----KEDLRFLEISE 127 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~-~p~~~----v~W~~~~~~~~~-------------~~~~~~~~-----~~~~~~l~i~~ 127 (325)
.|..+.+.+|++++|.|.+.+ .+.+. +.|+|++..... ..++.+.. ..+..+|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 345566889999999999854 44433 899998642211 23444433 22356899999
Q ss_pred CCCCCCeEEEEEEEeCC-eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcE-EEEEEEE-ecCCCCCeeEEeeCC
Q psy1095 128 VTLEDAGLYTIKVENNY-GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSV-TFECQVQ-VVPPNDHDISWFRNN 204 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v-~l~C~~~-~~~~~~~~~~W~~~~ 204 (325)
++.+|+|.|+|.+.+.. +.....+.|.|... |.+........ ..|+.+ .|.|.+. +.|. +.+.|++++
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~------P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~--p~v~W~k~~ 155 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAK------PQNTAEVQKVQ-LTGEPVPMARCVSTGGRPP--AQITWHSDL 155 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCCC------CEEEEEEECCC-CCSSSCCEEEEEEESCSSC--CCEEEECSS
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEEC------CCceeecCCcc-cCCceEEEEEEECCCccCC--CeeEEEeCC
Confidence 99999999999999865 55666667777654 44433322222 568888 5999988 6676 799999875
Q ss_pred EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 205 RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
........ ............+.|.|.++..+|.|.|+|.|.|..+.....+.|
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 156 GGMPQTSQ---VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp SCCCCCEE---ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEE
T ss_pred CCCCccce---eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEE
Confidence 43322110 000112223345789999999999999999999988765444333
No 220
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.83 E-value=7.6e-20 Score=148.06 Aligned_cols=181 Identities=14% Similarity=0.204 Sum_probs=107.0
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeC------C--C----------CCcEEEE-ecCCeEEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPA------T--P----------NARVTIR-EKEDLRFL 123 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~------~--~----------~~~~~~~-~~~~~~~l 123 (325)
+|.+...|..+.+.+|++|+|.|.+.+.+.+.+.|+|.. ... . . ..++... ......+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 467777888889999999999999988888899999831 110 0 0 0111111 12234579
Q ss_pred EEccCCCCCCeEEEEEEEeCCe---eEEEEEEEEEECCCccc-----------CCCeeeecCcCeeEecCCcEEEEEEEE
Q psy1095 124 EISEVTLEDAGLYTIKVENNYG---SVEATARLEIMDPRAII-----------SRPKVLNGLENLRCCDGDSVTFECQVQ 189 (325)
Q Consensus 124 ~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~-----------~~p~~~~~~~~~~v~~g~~v~l~C~~~ 189 (325)
.|.+++.+|+|.|.|.+.+..+ .......|.|....... ..+.+...+....+.+|+.++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999988654 33344567776542111 135666666678899999999999887
Q ss_pred ec-CCCCCeeEEeeCCE--Eec---c-C----C--CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEe
Q psy1095 190 VV-PPNDHDISWFRNNR--LIK---L-D----S--DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVAN 249 (325)
Q Consensus 190 ~~-~~~~~~~~W~~~~~--~~~---~-~----~--~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 249 (325)
+. +. +.+.|++... .+. . . . ..+.. ...........|.|.+++.+|+|.|.|.+.+
T Consensus 162 ~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 162 TSWWS--YYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYS--VNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CCCSS--CEEEEEEECTTCCEEEEEEEETTSCCCEETTEE--ECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CccCC--ceEEEeeeCCCCCcEEEEEECCcCCcccCCeEE--EEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 74 44 8999998431 110 0 0 0 00111 1100111235699999999999999999975
No 221
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=4.7e-20 Score=148.42 Aligned_cols=172 Identities=15% Similarity=0.143 Sum_probs=117.5
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEE-EEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVT-IREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|...|. ..+.+|++|+|.|.+.+ +.+.+.|+|++..+....... .........|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 5678877776 56889999999999864 567899999886542110000 00112346799999999999999999975
Q ss_pred CC-----eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 143 NY-----GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 143 ~~-----~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
.. ......+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+. + +.+.|+|++..+.........
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~---~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~--~~~~w~k~g~~~~~~~~~~~~- 155 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGL---YEKPSLSAQPG-PTVLAGESVTLSCSSRSS-Y--DMYHLSREGEAHERRFSAGPK- 155 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECS---SCCCEEECSSC-TTCBTTCEEEEEEECSSC-C--SEEEEEETTSSCEECCBCBCC-
T ss_pred cCCCccccccCCCEEEecccC---CCCcceEccCC-CccCCCCEEEEEEeCCCC-C--cEEEEEECCcccCcccccccc-
Confidence 42 12244566777653 23466655543 467899999999998754 3 689999998766533211100
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
..+ .....|.|.+++ |+|.|+|.+.+..
T Consensus 156 -~~~---~~~~~l~I~~v~--D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 156 -VNG---TFQADFPLGPAT--HGGTYRCFGSFRD 183 (257)
T ss_dssp -SSS---CCBEEEEEEECC--SCEEEEEEEECSS
T ss_pred -cCC---ceeEEEEecccc--cCEEEEEEEEcCC
Confidence 000 013689999998 9999999999753
No 222
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.82 E-value=9.4e-20 Score=138.75 Aligned_cols=157 Identities=16% Similarity=0.276 Sum_probs=113.3
Q ss_pred CCceEecCCCeEEEEEEEE--ecCCCeeEEee--CCeeC----------CCCCcEEEEecCCeEEEEEccCCCCCCeEEE
Q psy1095 72 PHNKICDLGDTVRFQCSVT--GQPAPWTSWSK--DGKPA----------TPNARVTIREKEDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~--~~p~~~v~W~~--~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 137 (325)
+..+.+.+|++|+|.|... +.+.+.|.|++ ++..+ ....++.+...+ +|.|.+++..|+|.|+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYK 82 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEE
Confidence 3455688999999999542 24567899999 87765 234566555332 6999999999999999
Q ss_pred EEEEeCCeeE--EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCce
Q psy1095 138 IKVENNYGSV--EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKP 215 (325)
Q Consensus 138 C~~~~~~~~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 215 (325)
|.+.+..+.. ...+.|.|... ...|.+.. .+..+.|.|.+.+.|+ +.+.|++++..+. ..
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~---~~~P~i~~--------~~~~v~L~C~~~~~p~--~~~~W~~~g~~l~-~~---- 144 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQER---VSKPKISW--------TCINTTLTCEVMNGTD--PELNLYQDGKHLK-LS---- 144 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECC---CCCCEEEE--------ETTTTEEEEECSSCSS--CEEEEEESSCEEE-EE----
T ss_pred EEEEeCCCceeEEEEEEEEEcCc---CCCCEEEE--------ccCcEEEEeEccCCCC--CEEEEEECCEECC-CC----
Confidence 9999887654 34567777764 23344432 2347999999988876 8999999998771 10
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 216 EVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 216 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
+ ..+.+.. ..+|+|.|+|.|.|..+.....+.+.
T Consensus 145 -----~------~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 145 -----Q------RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp -----S------SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred -----C------cEEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 1 1233332 47899999999999999888776664
No 223
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.82 E-value=9.9e-20 Score=148.14 Aligned_cols=188 Identities=16% Similarity=0.275 Sum_probs=124.8
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeC--CeeC------------CC----CCcEEEEe-cCCeEEEEE
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKD--GKPA------------TP----NARVTIRE-KEDLRFLEI 125 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~--~~~~------------~~----~~~~~~~~-~~~~~~l~i 125 (325)
.+.+...|....+.+|++++|.|.+. .+.+.+.|||. +... .. ..++.+.. ..+..+|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 44566677778899999999999986 57789999982 2111 00 14555554 233578999
Q ss_pred ccCCCCCCeEEEEEEEeC--CeeEEEEEEEEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEee
Q psy1095 126 SEVTLEDAGLYTIKVENN--YGSVEATARLEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWFR 202 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~--~~~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~ 202 (325)
.+++.+|+|.|.|.+.+. .........|.|........+|.+... +....+..|+.++|.|.+.+.+++...+.|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999873 233334456777653322334554433 23334556999999999998766323899999
Q ss_pred CCEEeccCCCCceEE-----EecCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCCc
Q psy1095 203 NNRLIKLDSDMKPEV-----QVDSKENLVIARLKIPHVYPED-EGEFTCRVANELGE 253 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 253 (325)
+|..+.......... ...+..+...+.|.|.....+| .|.|+|.|.|....
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 998875432110000 0012233345678888887777 99999999987543
No 224
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.82 E-value=5.7e-20 Score=146.04 Aligned_cols=188 Identities=13% Similarity=0.194 Sum_probs=120.8
Q ss_pred CCCee-EecCCceEecCCCeEEEEEEEEec-CC-C-eeEEeeCCeeC-CCCCcEEEEecCC----eEEEEEccCCCCCCe
Q psy1095 64 SSPRF-YAVPHNKICDLGDTVRFQCSVTGQ-PA-P-WTSWSKDGKPA-TPNARVTIREKED----LRFLEISEVTLEDAG 134 (325)
Q Consensus 64 ~~p~~-~~~~~~~~v~~g~~v~l~C~~~~~-p~-~-~v~W~~~~~~~-~~~~~~~~~~~~~----~~~l~i~~~~~~d~G 134 (325)
.+|.+ +..|....+.+|++++|.|.+.+. |. | .++|+++|..+ ...........++ ...|.|.+++.+|.|
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g 90 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGE 90 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCC
Confidence 35554 456766678899999999999884 64 4 99999998877 3322222111122 236999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCc
Q psy1095 135 LYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMK 214 (325)
Q Consensus 135 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 214 (325)
.|+|.+.+..+.. .+.+.|........+|.+...........+..+.|.|.+.+++++.+.+.|+++|..+.......
T Consensus 91 ~Y~C~~~~~~~~~--~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 168 (231)
T 2w59_A 91 RFTCTVQHEELPL--PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVT 168 (231)
T ss_dssp CEEEEEECTTCSS--CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEE
T ss_pred EEEEEEEcCCCCC--ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCccccc
Confidence 9999999876542 22333332111113455443322211123557999999999755337999999999886543111
Q ss_pred e-EEEe--------cC-CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 215 P-EVQV--------DS-KENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 215 ~-~~~~--------~~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
. .... .+ ..+...+.|.|.....+|.|.|+|.|.|....
T Consensus 169 ~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 169 TAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred CccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 0 0011 11 23445578999888888999999999997654
No 225
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.82 E-value=1.9e-20 Score=146.02 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=106.7
Q ss_pred eeeecccCCCCcccCCCCCC------CCCCCCCcccCCCCCCCccccccccccccc-cc---------------------
Q psy1095 11 LSVKLTRPSGLMSGHSTPRS------TPRSTPPRSISPLSSRTFTPYSLNSAIRTR-RL--------------------- 62 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~-~~--------------------- 62 (325)
..++|.+++..+......+. ...+|.|.+++++|+|.|+|.+.|+..... .+
T Consensus 33 p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (207)
T 3rbs_A 33 AKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEW 112 (207)
T ss_dssp CEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEEEEEccchhhhccccccccccc
Confidence 46788888887755433221 112588999999999999997766322110 00
Q ss_pred --CCCCeeEecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEE
Q psy1095 63 --TSSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIK 139 (325)
Q Consensus 63 --~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 139 (325)
..+|.+...+ ...+.+|+.+.|.|.+.|. |.|.++|+|++.++....++. ...+..+|.|.+++.+|+|.|+|.
T Consensus 113 ~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~ 189 (207)
T 3rbs_A 113 IRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVI 189 (207)
T ss_dssp HHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEE
T ss_pred ccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE--cCCCEEEEEECCCCcccCEEEEEE
Confidence 1367776655 4678999999999999998 999999999999987655432 233446799999999999999999
Q ss_pred EEeCCeeEEEEEEEEE
Q psy1095 140 VENNYGSVEATARLEI 155 (325)
Q Consensus 140 ~~~~~~~~~~~~~l~v 155 (325)
+.|..|.....+.|.+
T Consensus 190 a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 190 LKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEETTEEEEEEEEECC
T ss_pred EEcCCCEEEEEEEEec
Confidence 9999998888777654
No 226
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.82 E-value=8.2e-19 Score=141.82 Aligned_cols=181 Identities=17% Similarity=0.249 Sum_probs=120.0
Q ss_pred EecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC------C-----------CCCcEEEEec--CCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA------T-----------PNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~------~-----------~~~~~~~~~~--~~~~~l~i 125 (325)
...|....+.+|++++|.|.+.+.+ .+.+.|||+. ..+ . ...++.+..+ .+..+|.|
T Consensus 10 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 89 (261)
T 2xqy_G 10 LQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQL 89 (261)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred EECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEE
Confidence 3456677899999999999998766 6789999863 211 0 0235555442 34578999
Q ss_pred ccCCCCCCeEEEEEEEeCCe---eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee
Q psy1095 126 SEVTLEDAGLYTIKVENNYG---SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR 202 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~ 202 (325)
.+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.++|.|.+.+..+....+.|++
T Consensus 90 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k 167 (261)
T 2xqy_G 90 SSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK--TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 167 (261)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC--CBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCC--CCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEec
Confidence 99999999999999988542 11233567776522 13455544333334678999999999998633214999999
Q ss_pred CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 203 NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
++..+......... .. ..+...+.|.|..+..+| |.|+|.|.|......
T Consensus 168 ~g~~~~~~~~~~~~--~~-g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~ 216 (261)
T 2xqy_G 168 GSLSSGVHTFPAVL--QS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 216 (261)
T ss_dssp GTCCTTEEECCCEE--ET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred CCCcCceEecCcee--cC-CcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc
Confidence 98754321111111 11 233345789999988888 999999999765543
No 227
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.82 E-value=1.4e-18 Score=133.52 Aligned_cols=147 Identities=22% Similarity=0.339 Sum_probs=101.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+............+ ..|.|.+++.+|+|.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y 72 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPA--PAVSWLYHNEEVTTISDNRFAMLAN-------NNLQILNINKSDEGIY 72 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSC--CEEEEEC-----CBCCCTTEEECTT-------SCEEETTCCGGGCEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCC--CEEEEEECCccceeccCCeEEEecC-------CCEEEeeCCHhHCcEE
Confidence 467777777889999999999999998877 8999999988776543333332222 3699999999999999
Q ss_pred EEEEEeCCCcEE--eEEEEEEEeeC--------------------------------------CeecCCCCceEEEEeCC
Q psy1095 244 TCRVANELGEVV--TSACLIVDVVK--------------------------------------GKDLTSDGRLNIITVGG 283 (325)
Q Consensus 244 ~C~~~~~~~~~~--~~~~l~v~~~~--------------------------------------~~~~~~~~~~~~~~~~~ 283 (325)
+|.+.+..+... ..+.+.+...+ +..+..+.+.. ....
T Consensus 73 ~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~--~~~~ 150 (189)
T 2v5t_A 73 RCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYI--LKGS 150 (189)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEE--EETT
T ss_pred EEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEE--EecC
Confidence 999999875443 23333332222 11111111111 1112
Q ss_pred EEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEec
Q psy1095 284 TSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 284 ~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
...|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 151 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 151 NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 34699999999999999999999999999999988864
No 228
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.82 E-value=4.9e-19 Score=136.48 Aligned_cols=148 Identities=26% Similarity=0.430 Sum_probs=104.1
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... +......+ ..|.|.+++.+|+|.|
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~--~~i~W~~~~~~~~~~~~-~~~~~~~~------~~L~i~~~~~~d~G~Y 77 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQ--PEISWTRNKILIKLFDT-RYSIRENG------QLLTILSVEDSDDGIY 77 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESC--CEEEEEETTEECCTTCT-TEEEEGGG------TEEEESSCCGGGCEEE
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCC--CeEEEEECCEEccccCc-cEEEcCCc------cEEEEcCCCcccCeEE
Confidence 456666666678899999999999999887 79999999988764322 22222222 3699999999999999
Q ss_pred EEEEEeCCCc-EEeEEEEEEEeeCC------------------------------------eecCCCCceEEEEeCCEEE
Q psy1095 244 TCRVANELGE-VVTSACLIVDVVKG------------------------------------KDLTSDGRLNIITVGGTSV 286 (325)
Q Consensus 244 ~C~~~~~~~~-~~~~~~l~v~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~ 286 (325)
+|.+.|..+. ......|.|...+. ..+..+.+... .....
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~---~~~~~ 154 (192)
T 2iep_A 78 CCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAV---LESGS 154 (192)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEE---CTTSC
T ss_pred EEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEE---ecCCc
Confidence 9999998776 34444555533221 11111111111 01126
Q ss_pred EEEcCCCCCCCeEEEEEEECCCeeEE-eEEEEEEeccc
Q psy1095 287 LTIEDITGDDSGKYQVHVSNQHGSDS-CYASVAVEGRK 323 (325)
Q Consensus 287 l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p 323 (325)
|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|
T Consensus 155 L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 155 LRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999999999999885 46999998876
No 229
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.81 E-value=4.3e-19 Score=122.71 Aligned_cols=96 Identities=25% Similarity=0.475 Sum_probs=88.2
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..||.|...|.+..+.+|+++.|.|.+.|.|.|.++|+|++..+....++.+...+...+|.|.+++.+|+|.|+|.+.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 35899999999999999999999999999999999999999999988888887777888999999999999999999999
Q ss_pred CCeeEEEEEEEEEECC
Q psy1095 143 NYGSVEATARLEIMDP 158 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~ 158 (325)
..|.....+.|.|..+
T Consensus 91 ~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TTEEEEEEEEEEEEC-
T ss_pred CCCEEEEEEEEEEEcC
Confidence 9999888889988764
No 230
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.81 E-value=3.1e-19 Score=140.25 Aligned_cols=185 Identities=17% Similarity=0.174 Sum_probs=133.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCC--CcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPN--ARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+|.| ..|....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++.+........|.|.+++..|+|.|+|.+.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 46777 5677788999999999999999999999999999998765 45666655667889999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec----CCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV----PPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~----~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
|..|.....+.|.|...|. +|.... ....+..+.|.|..... |.....+.|.+++...... ...
T Consensus 97 n~~g~~~~~~~l~v~~~P~---~p~~~~-----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~----~~~ 164 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPS---SPSIDQ-----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWY 164 (215)
T ss_dssp CSSCEEEEEEEEEECCCCC---CCEEEE-----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEE----EEE
T ss_pred ECCCceEEEEEEEECCCCC---CCcceE-----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccc----ccc
Confidence 9999888888888876643 233221 12346778899874321 2101247788776432110 000
Q ss_pred EecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 218 QVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 218 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
.... ......|.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 165 ~~~~--~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 165 DAKE--ASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp EHHH--HHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred cccc--ccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 0000 0001379999999999999999999999987766666553
No 231
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.81 E-value=1e-18 Score=137.98 Aligned_cols=181 Identities=14% Similarity=0.259 Sum_probs=118.4
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCCe--eC------C-------------CCCcEEEEec--CCeEEEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDGK--PA------T-------------PNARVTIREK--EDLRFLE 124 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~~--~~------~-------------~~~~~~~~~~--~~~~~l~ 124 (325)
..|....+.+|++|+|.|.+.+.+ .+.+.|||... .. . ...++.+..+ ....+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQ 84 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEE
Confidence 445667799999999999998743 57899997421 10 0 1245555432 3456899
Q ss_pred EccCCCCCCeEEEEEEEeCC--eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEe
Q psy1095 125 ISEVTLEDAGLYTIKVENNY--GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWF 201 (325)
Q Consensus 125 i~~~~~~d~G~Y~C~~~~~~--~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~ 201 (325)
|.+++.+|+|.|.|.+.+.. ........|.|...+ ..+|.+........ .+|+.++|.|.+.+..+. .+.+.|+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~--~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~ 161 (221)
T 3m8o_H 85 MNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS--PTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWS 161 (221)
T ss_dssp ECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC--CBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEES
T ss_pred ECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCC--CCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEE
Confidence 99999999999999998753 222333456665321 23455542222222 689999999999984432 2589999
Q ss_pred eCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 202 RNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
+++..+...... ......+..+...+.|.|.....+|.|.|+|.|.+..+..
T Consensus 162 ~~g~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 162 ESGQGVTARNFP-PSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CCSTTCEEEECC-CEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ECCEECceEEcC-ceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 988766321110 0000122233345679999999999999999999987543
No 232
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.81 E-value=5.1e-19 Score=142.48 Aligned_cols=181 Identities=15% Similarity=0.240 Sum_probs=105.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC------C-----------CCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA------T-----------PNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~------~-----------~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++++|.|.+.+.+ .+.+.|||.. ..+ . ...++.+..+ .+..+|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (257)
T 3bn9_D 5 VQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMS 84 (257)
T ss_dssp EEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEE
T ss_pred EccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEEC
Confidence 345567799999999999998765 5789999853 111 0 1245555443 356789999
Q ss_pred cCCCCCCeEEEEEEEeCCe-------------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCC
Q psy1095 127 EVTLEDAGLYTIKVENNYG-------------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPP 193 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~-------------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~ 193 (325)
+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.++|.|.+.+..+
T Consensus 85 ~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~--~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P 162 (257)
T 3bn9_D 85 SLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 162 (257)
T ss_dssp SCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC--CBCCEECCCCC-----------CCCEEEEEBS
T ss_pred CCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC--CcCCcEEEecCcccccCCCcEEEEEEEeeEEC
Confidence 9999999999999987653 11123467776521 13455544333334567999999999998733
Q ss_pred CCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 194 NDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 194 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
....+.|++++..+..... ... ...+..+...+.|.|.++..+| |.|+|.|.|......
T Consensus 163 ~pi~v~W~k~g~~~~~~~~-~~~-~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 163 EPVTVSWNSGALTSGVHTF-PAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp SCCEEEETTTTCCSSCEEC-CCE-ECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred CCcEEEEeeCCCcCCcEec-CCe-EcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 2149999999876421111 001 1222233445789999888888 999999999765433
No 233
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.81 E-value=7.4e-19 Score=144.62 Aligned_cols=179 Identities=16% Similarity=0.233 Sum_probs=115.3
Q ss_pred EecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeCC-----------------CCCcEEEEe--cCCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPAT-----------------PNARVTIRE--KEDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~--~~~~~~l~i 125 (325)
...|....+.+|++++|.|.+.+.+ .+.+.|+|+. .... ...++.+.. .....+|.|
T Consensus 26 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 105 (291)
T 2gki_A 26 LQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMEL 105 (291)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEE
T ss_pred EEcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEE
Confidence 3456678899999999999998766 5789999853 1110 013444433 234578999
Q ss_pred ccCCCCCCeEEEEEEEeCC-e--e--EEEEEEEEEECC----------CcccCCCeeeecCcCeeEecCCcEEEEEEEEe
Q psy1095 126 SEVTLEDAGLYTIKVENNY-G--S--VEATARLEIMDP----------RAIISRPKVLNGLENLRCCDGDSVTFECQVQV 190 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~-~--~--~~~~~~l~v~~~----------~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~ 190 (325)
.+++.+|+|.|.|.+.+.. + . ......|.|... +....++.+...+....+.+|+.++|.|.+.+
T Consensus 106 ~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 185 (291)
T 2gki_A 106 SSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQ 185 (291)
T ss_dssp CSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESS
T ss_pred CcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCC
Confidence 9999999999999998763 1 1 112345666551 01112334444455567899999999999987
Q ss_pred cCCCC----CeeEEeeCC--EE---eccCC-------CCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 191 VPPND----HDISWFRNN--RL---IKLDS-------DMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 191 ~~~~~----~~~~W~~~~--~~---~~~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
.+.+. +.+.|+|+. .. +.... ..+......+ ....|.|.+++.+|+|.|.|.+.+..
T Consensus 186 ~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 186 SLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSG----TDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp CCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred ccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecC----CEEEEEECCCCHHHCEEEEEEEccCC
Confidence 76510 189999953 21 11000 1111111111 24689999999999999999999854
No 234
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.80 E-value=1.8e-19 Score=136.11 Aligned_cols=152 Identities=14% Similarity=0.224 Sum_probs=108.9
Q ss_pred ceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC------------CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 74 NKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP------------NARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+.+.+|++|+|.|.+. .|.+.+.|++++..+.. ..++.+ .....+|.|.+++..|+|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE--CTTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEE--eCCCCeEEECCCChhhCceEEEEEe
Confidence 45688999999999984 48889999998764321 112222 1233569999999999999999998
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecC
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDS 221 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+..+ ...+.|.|..++ ..|.+..... ...|.|.+.+.|. +.+.|++++..+.....
T Consensus 81 n~~~--~~~~~L~V~~~~---~~p~i~~~~~--------~~~L~C~~~~~p~--p~i~W~~~~~~l~~~~~--------- 136 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMV---SKPMIYWECS--------NATLTCEVLEGTD--VELKLYQGKEHLRSLRQ--------- 136 (171)
T ss_dssp TCCS--CEEEEEEEECCC---CCCEEEEETT--------TTEEEEECSSCSS--CEEEEEETTEEEEEESS---------
T ss_pred CCCC--cEEEEEEEECcC---CCCEEEEecC--------CcEEEEEeCCCCC--cEEEEEECCEECcCCcc---------
Confidence 7766 566778887652 2355443221 1379999988776 89999999988763221
Q ss_pred CcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEE
Q psy1095 222 KENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACL 260 (325)
Q Consensus 222 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 260 (325)
..|.+. ...|.|.|+|.|.|..+.....+.|
T Consensus 137 ------~~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 137 ------KTMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp ------SEEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred ------eEEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 123333 3678999999999999887766544
No 235
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.80 E-value=1.3e-18 Score=138.92 Aligned_cols=184 Identities=15% Similarity=0.240 Sum_probs=118.5
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee---C------------CCCCcEEEEe-cCCeEEEEEccCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP---A------------TPNARVTIRE-KEDLRFLEISEVT 129 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~---~------------~~~~~~~~~~-~~~~~~l~i~~~~ 129 (325)
+...|....+.+|++++|.|.+. .+.+.+.|||++ .. + ....++.+.. .....+|.|.+++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 45667888899999999999984 467899999853 11 0 0123555443 2345789999999
Q ss_pred CCCCeEEEEEEEeCCe-----eEEEEEEEEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEeeC
Q psy1095 130 LEDAGLYTIKVENNYG-----SVEATARLEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWFRN 203 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~ 203 (325)
.+|+|.|.|.+.+..+ .......|.|........+|.+... +....+..|+.+.|.|.+.+.++..+.+.|+++
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 160 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 160 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEET
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEEC
Confidence 9999999999987631 1122345777653222234555443 233345679999999999987432158999999
Q ss_pred CEEeccCCCCc-eEEEecCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCC
Q psy1095 204 NRLIKLDSDMK-PEVQVDSKENLVIARLKIPHVYPED-EGEFTCRVANELG 252 (325)
Q Consensus 204 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 252 (325)
+..+....... ......+..+...+.|.|......| .|.|+|.|.|...
T Consensus 161 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 161 GKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred CEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 98876442211 0011122222334556676555444 6789999999753
No 236
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.80 E-value=1.3e-18 Score=139.14 Aligned_cols=146 Identities=21% Similarity=0.312 Sum_probs=103.0
Q ss_pred CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
...+.+|+.+.|.|.+.+.|. +.+.|++++..+............. ....|.|.+++.+|+|.|+|.+.|..+
T Consensus 24 ~~~v~~G~~v~L~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 96 (241)
T 3grw_A 24 LLAVPAANTVRFRCPAAGNPT--PSISWLKNGREFRGEHRIGGIKLRH-----QQWSLVMESVVPSDRGNYTCVVENKFG 96 (241)
T ss_dssp EEEEETTSEEEEECCEECSSC--CEEEEEETTEECCGGGSTTCCEEEG-----GGTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred ceEEcCCCeEEEEEEecCCCC--ceeEEEECCcccCCCCcccceeeec-----cceEEEEEeCCcccCEEEEEEEeecCC
Confidence 467889999999999998877 8999999999886544332111111 124799999999999999999999988
Q ss_pred cEEeEEEEEEEeeCCe------------ecCCCC--------------ceEEEE----e---------------------
Q psy1095 253 EVVTSACLIVDVVKGK------------DLTSDG--------------RLNIIT----V--------------------- 281 (325)
Q Consensus 253 ~~~~~~~l~v~~~~~~------------~~~~~~--------------~~~~~~----~--------------------- 281 (325)
.....+.|.|...... .+..+. .+.... .
T Consensus 97 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (241)
T 3grw_A 97 SIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISE 176 (241)
T ss_dssp EEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECS
T ss_pred ceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeee
Confidence 8877777777542110 011011 111111 0
Q ss_pred --CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccCC
Q psy1095 282 --GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKII 325 (325)
Q Consensus 282 --~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~i 325 (325)
.....|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++|.+
T Consensus 177 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 177 SVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp BSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred ecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCC
Confidence 02346999999999999999999999999999999999988753
No 237
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.80 E-value=2.4e-19 Score=142.95 Aligned_cols=186 Identities=18% Similarity=0.182 Sum_probs=115.6
Q ss_pred CCee-EecCCceE-ecCCCeEEEEEEEEec---CCC-eeEEeeCCeeCCCCCcE-EEEecC----CeEEEEEccCCCCCC
Q psy1095 65 SPRF-YAVPHNKI-CDLGDTVRFQCSVTGQ---PAP-WTSWSKDGKPATPNARV-TIREKE----DLRFLEISEVTLEDA 133 (325)
Q Consensus 65 ~p~~-~~~~~~~~-v~~g~~v~l~C~~~~~---p~~-~v~W~~~~~~~~~~~~~-~~~~~~----~~~~l~i~~~~~~d~ 133 (325)
+|.+ ...|.... +.+|++++|.|.+.+. |.+ .|+|+|++..+...... .....+ ....|.|.+++.+|+
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 4444 44444333 7899999999999886 766 89999988665422100 001111 124699999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCC
Q psy1095 134 GLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDM 213 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~ 213 (325)
|.|+|.+.+..+....... +........+|.+...........|+.+.|.|.+.+++++...+.|+++|..+......
T Consensus 95 g~Y~C~~~~~~~~~~~~~~--v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 172 (239)
T 1i1c_A 95 KTFKCKVNSGAFPAPIEKS--ISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNT 172 (239)
T ss_dssp CCEEEEEECSSSSSCEEEE--ECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEEC
T ss_pred CeEEEEEecccCCCCcEEE--EecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceec
Confidence 9999999987764322112 21111222456655444333233578899999999865533689999999987532111
Q ss_pred ceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 214 KPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 214 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
... ...+..+...+.|.|.....+|.|.|+|.|.|....
T Consensus 173 ~~~-~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 173 PPT-MDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp CCE-ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred Cce-ECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 111 112223334456777666556799999999997754
No 238
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.80 E-value=2.4e-18 Score=138.67 Aligned_cols=187 Identities=15% Similarity=0.222 Sum_probs=120.8
Q ss_pred ecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCCe-----eC--------------CCCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDGK-----PA--------------TPNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~~-----~~--------------~~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++++|.|.+.+. +...+.|||... .+ ....++.+..+ .+..+|.|.
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (253)
T 3liz_H 5 VESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMS 84 (253)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEEC
T ss_pred EcCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEEC
Confidence 34566789999999999999763 356899998421 11 01235555432 356779999
Q ss_pred cCCCCCCeEEEEEEEeCC----eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee
Q psy1095 127 EVTLEDAGLYTIKVENNY----GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR 202 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~ 202 (325)
+++.+|+|.|.|.+.+.. ........|.|.... ..+|.+........+..|+.+.|.|.+.+..+....+.|++
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 162 (253)
T 3liz_H 85 SLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK--TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (253)
T ss_dssp SCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC--CBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC--CCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEe
Confidence 999999999999997652 222334566775321 23466654444445667999999999998433324899999
Q ss_pred CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 203 NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
++..+........ ... ..+...+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 163 ~~~~~~~~~~~~~--~~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 163 GSLSSGVHTFPAV--LQS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp GTBCTTEEECCCE--EET-TEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred CCeecceEeCCcc--ccC-CeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 8864321111111 111 233345789999999999 9999999999887766655544
No 239
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.80 E-value=1.6e-18 Score=132.02 Aligned_cols=154 Identities=14% Similarity=0.237 Sum_probs=108.2
Q ss_pred CceEecCCCeEEEEEEEEe-cCCCeeEEeeC-CeeCC------------CC--CcEEEEecCCeEEEEEccCCCCCCeEE
Q psy1095 73 HNKICDLGDTVRFQCSVTG-QPAPWTSWSKD-GKPAT------------PN--ARVTIREKEDLRFLEISEVTLEDAGLY 136 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~-~p~~~v~W~~~-~~~~~------------~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y 136 (325)
.++.+.+|++|+|.|.+.+ .+.+.+.|+|. +..+. .. .++.+ .....+|.|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 4567899999999999744 34679999994 32211 11 34444 12335699999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceE
Q psy1095 137 TIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPE 216 (325)
Q Consensus 137 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 216 (325)
.|.+.+.. .....+.|.|..++ ..|.+.. .+..+.|.|.+...|. +.+.|++++..+..
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~---~~P~i~~--------~~~~v~L~C~~~~gp~--p~i~W~~~~~~l~~------- 143 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMV---SKPMIYW--------ECSNATLTCEVLEGTD--VELKLYQGKEHLRS------- 143 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCC---CCCEEEE--------EGGGTEEEEECSSCTT--CEEEEEETTEEEEE-------
T ss_pred EEEEEcCC-eEEEEEEEEEECCC---CCCEEEe--------cCCCEEEEEEeCCCCC--CEEEEEECCeECcC-------
Confidence 99998766 55667788887642 2344332 3467999999933366 89999999988751
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEE
Q psy1095 217 VQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSAC 259 (325)
Q Consensus 217 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 259 (325)
..+ ..|.+.. .+|+|.|+|.|.|..+.......
T Consensus 144 --~~~------~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 144 --LRQ------KTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp --ESS------SEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred --CCC------CEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 111 2455532 78999999999999987765543
No 240
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.79 E-value=2.5e-19 Score=140.33 Aligned_cols=148 Identities=17% Similarity=0.300 Sum_probs=114.7
Q ss_pred ceeeecccCCCCcccCCCCCC----CCCCCCCcccCCCCCCCccccccccccccc---ccC-------------------
Q psy1095 10 SLSVKLTRPSGLMSGHSTPRS----TPRSTPPRSISPLSSRTFTPYSLNSAIRTR---RLT------------------- 63 (325)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~---~~~------------------- 63 (325)
...++|.+++..+........ ...+|.|.+++.+|+|.|+|.+.+..+... .+.
T Consensus 32 ~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~ 111 (212)
T 2r15_A 32 DLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAI 111 (212)
T ss_dssp SCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccc
Confidence 457888888776654332211 113489999999999999999987543211 110
Q ss_pred ----CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEec-CCeEEEEEccCCCCCCeEEEE
Q psy1095 64 ----SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREK-EDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 64 ----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C 138 (325)
.|+.+...|....+.+|+.+.|.|.+.+.|.|.+.|++++..+....++.+... +....|.|.+++.+|+|.|+|
T Consensus 112 ~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 191 (212)
T 2r15_A 112 AEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGL 191 (212)
T ss_dssp HHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEE
T ss_pred cccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEE
Confidence 333444456667899999999999999999999999999999988777776655 556789999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEC
Q psy1095 139 KVENNYGSVEATARLEIMD 157 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~ 157 (325)
.+.|..|.....+.|.|..
T Consensus 192 ~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 192 VVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEcCCCcEEEEEEEEEEc
Confidence 9999999888888888864
No 241
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.79 E-value=2.9e-18 Score=134.69 Aligned_cols=178 Identities=16% Similarity=0.265 Sum_probs=114.2
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--eeC----------------CCCCcEEEEec--CCeEEEEEccC
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KPA----------------TPNARVTIREK--EDLRFLEISEV 128 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~~----------------~~~~~~~~~~~--~~~~~l~i~~~ 128 (325)
.|....+.+|++++|.|.+.+.+ .+.+.|+|+. ... ....++.+..+ .+..+|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 46677899999999999998754 5789999853 211 01235555432 34568999999
Q ss_pred CCCCCeEEEEEEEeCCe---eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEec-CCCCCeeEEeeCC
Q psy1095 129 TLEDAGLYTIKVENNYG---SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVV-PPNDHDISWFRNN 204 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-~~~~~~~~W~~~~ 204 (325)
+.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.+.|.|.+.+. |.+ ..+.|++++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g 162 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ--TTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEP-VTVTWNSGA 162 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSC--CBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSC-CEEEEGGGT
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecCCC--CCCCeEEeccCChhhccCCcEEEEEEEeeeEcCC-cEEEEccCC
Confidence 99999999999987532 11223567776421 134555443323345689999999999987 541 399999988
Q ss_pred EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE
Q psy1095 205 RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 257 (325)
..+..... ... ..+..+...+.|. ....+| |.|+|.|.|..+.....
T Consensus 163 ~~~~~~~~-~~~--~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 163 LSSDVHTF-PAV--LQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp TCCSCCBC-CCE--EETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccCceEec-Ccc--cCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEE
Confidence 65432111 111 1112222223454 444456 99999999988775543
No 242
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.79 E-value=1.5e-18 Score=137.65 Aligned_cols=146 Identities=23% Similarity=0.309 Sum_probs=107.3
Q ss_pred cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ...|.|.+++.+|+|.|+|.+.|..
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~n~~ 99 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPM--PTMRWLKNGKEFKQEHRIGGYKVRNQ-----HWSLIMESVVPSDKGNYTCVVENEY 99 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESC--CEEEEEETTEECCGGGSTTCCEEEGG-----GTEEEECSCCGGGCEEEEEEEEETT
T ss_pred eeEEEccCCCEEEEEecccCCC--CeEEEEECCccccccccccceeeecC-----cceEEEecCCcccCEEEEEEEeccc
Confidence 4667889999999999999887 79999999998865543322111111 2479999999999999999999998
Q ss_pred CcEEeEEEEEEEeeCC---eecC-----------------------CCCceEEEEe---C--------------------
Q psy1095 252 GEVVTSACLIVDVVKG---KDLT-----------------------SDGRLNIITV---G-------------------- 282 (325)
Q Consensus 252 ~~~~~~~~l~v~~~~~---~~~~-----------------------~~~~~~~~~~---~-------------------- 282 (325)
+.....+.|.|..... ..+. +...+..... +
T Consensus 100 ~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~ 179 (231)
T 3ojm_B 100 GSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGI 179 (231)
T ss_dssp EEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECST
T ss_pred CcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEeccccc
Confidence 8888777777754221 1100 0011111110 1
Q ss_pred ---CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 283 ---GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 283 ---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
....|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 180 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 224 (231)
T 3ojm_B 180 NSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQ 224 (231)
T ss_dssp TCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-
T ss_pred ccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCC
Confidence 113599999999999999999999999999999999998773
No 243
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.79 E-value=1.8e-18 Score=138.19 Aligned_cols=187 Identities=14% Similarity=0.230 Sum_probs=121.5
Q ss_pred ecCCceEecCCCeEEEEEEEEecC----CCeeEEeeCC--ee---C---C----------------CCCcEEEEec--CC
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP----APWTSWSKDG--KP---A---T----------------PNARVTIREK--ED 119 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p----~~~v~W~~~~--~~---~---~----------------~~~~~~~~~~--~~ 119 (325)
..|....+.+|++|+|.|.+.+.+ ...+.||+.. .. + . ...++.+..+ ..
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 445667899999999999998755 3489999842 11 0 0 1134544432 44
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCe-------------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEE
Q psy1095 120 LRFLEISEVTLEDAGLYTIKVENNYG-------------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFEC 186 (325)
Q Consensus 120 ~~~l~i~~~~~~d~G~Y~C~~~~~~~-------------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C 186 (325)
..+|.|.+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.+.|.|
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~--~~~P~v~~~~~~~~~~~g~~v~l~C 162 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGC 162 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCC--CBCCEEEEECCCCCC--TTEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCC--CcCCEEEEECCChhhccCCcEEEEE
Confidence 67799999999999999999976421 11123355664321 2456666444444556799999999
Q ss_pred EEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 187 QVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 187 ~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
.+.+.++....+.|++++..+........ ...+..+...+.|.|.....+| |.|+|.|.|..+.......|.
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~--~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFPAV--LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCE--ECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEeeEeCCCeEEEEEECCccCceEecCce--ECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 99986553357899998864322111111 1223344455789999988888 999999999887666555443
No 244
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.79 E-value=2.3e-18 Score=140.85 Aligned_cols=179 Identities=14% Similarity=0.244 Sum_probs=115.5
Q ss_pred eeEecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--eeCC-----------------CCCcEEEE--ecCCeEEE
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KPAT-----------------PNARVTIR--EKEDLRFL 123 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~~~-----------------~~~~~~~~--~~~~~~~l 123 (325)
.+.. |....+.+|++|+|.|.+.+. +.+.+.|||.. .... ...++.+. ......+|
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 3 QLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred eEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 3445 777889999999999999774 56789999742 1110 01345554 23445689
Q ss_pred EEccCCCCCCeEEEEEEEeC---------CeeEEEEEEEEEEC-CC--------cccCCCeeeecCcCeeEecCCcEEEE
Q psy1095 124 EISEVTLEDAGLYTIKVENN---------YGSVEATARLEIMD-PR--------AIISRPKVLNGLENLRCCDGDSVTFE 185 (325)
Q Consensus 124 ~i~~~~~~d~G~Y~C~~~~~---------~~~~~~~~~l~v~~-~~--------~~~~~p~~~~~~~~~~v~~g~~v~l~ 185 (325)
.|.+++.+|+|.|.|.+.+. .........|.|.. .. ....++.+...+. ..+.+|+.++|.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~ 160 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLT 160 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEE
Confidence 99999999999999999876 11222344566654 10 0012344444444 778899999999
Q ss_pred EEEEecCCCCCeeEEeeC--CEEec---cC-------CCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 186 CQVQVVPPNDHDISWFRN--NRLIK---LD-------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 186 C~~~~~~~~~~~~~W~~~--~~~~~---~~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
|.+.+.+...+.+.|++. +..+. .. ...++.....+ ....|.|.+++.+|+|.|.|.+.+..
T Consensus 161 C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 161 CTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSG----NTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEET----TEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccC----CEEEEEECCCCHHHCEEEEEEEecCC
Confidence 999873322278999873 22211 00 00111111122 34679999999999999999999876
No 245
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.79 E-value=1.2e-17 Score=129.00 Aligned_cols=152 Identities=17% Similarity=0.356 Sum_probs=105.4
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEE-ecCCCCCeeEEeeCCEEeccCCCCceEEEecCC---cceeEEEEEeCCCCCCC
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQ-VVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSK---ENLVIARLKIPHVYPED 239 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d 239 (325)
+|.|...+....+.+|+.+.|.|.+. +.|. +.+.|++++..+............... .+.....|.|.+++.+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 79 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEP--PEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSD 79 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSC--CCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTT
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCC--cEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccC
Confidence 36677777888999999999999999 8777 889999999988755322222222211 11125789999999999
Q ss_pred CeEEEEEEEeCCCcEEeE-EEEEEEeeCCe-------ecC--------------CCC-ceEEEEe----------CCEEE
Q psy1095 240 EGEFTCRVANELGEVVTS-ACLIVDVVKGK-------DLT--------------SDG-RLNIITV----------GGTSV 286 (325)
Q Consensus 240 ~G~Y~C~~~~~~~~~~~~-~~l~v~~~~~~-------~~~--------------~~~-~~~~~~~----------~~~~~ 286 (325)
+|.|+|.+.+..+..... +.|.|...+.. .+. +.. .+..... .....
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~ 159 (195)
T 2c5d_C 80 TGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRS 159 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEE
T ss_pred CcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCe
Confidence 999999999987654433 55655322211 011 111 1111111 13468
Q ss_pred EEEcCCCCCCCeEEEEEEECCCeeEE-eEEEEEE
Q psy1095 287 LTIEDITGDDSGKYQVHVSNQHGSDS-CYASVAV 319 (325)
Q Consensus 287 l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 319 (325)
|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 160 L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 160 LHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999987 78999999999999986 7899998
No 246
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.79 E-value=3.4e-18 Score=136.00 Aligned_cols=187 Identities=13% Similarity=0.163 Sum_probs=118.2
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCee--EEeeCCe-----eC-----C-----------CCCcEEEEec--CCeEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--APWT--SWSKDGK-----PA-----T-----------PNARVTIREK--EDLRF 122 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v--~W~~~~~-----~~-----~-----------~~~~~~~~~~--~~~~~ 122 (325)
..|....+.+|++|+|.|.+.+.+ ...+ .||+... .+ . ...++.+... .+..+
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 84 (232)
T 3qhz_H 5 RESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVV 84 (232)
T ss_dssp EEECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEE
T ss_pred EcCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEE
Confidence 344556789999999999997632 2445 9997321 00 0 0135555433 35678
Q ss_pred EEEccCCCCCCeEEEEEEEeCC--------eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC
Q psy1095 123 LEISEVTLEDAGLYTIKVENNY--------GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN 194 (325)
Q Consensus 123 l~i~~~~~~d~G~Y~C~~~~~~--------~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~ 194 (325)
|.|.+++.+|+|.|.|.+.+.. ........|.|.... ..+|.+........+..|+.+.|.|.+.+.++.
T Consensus 85 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 85 LTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp EEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC--CBCCEEEEECC-------CEEEEEEEEEEEBSS
T ss_pred EEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC--CCCCEEEEecccccccCCCcEEEEEEEeeEeCC
Confidence 9999999999999999998652 122233456665321 245666544444456679999999999986654
Q ss_pred CCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 195 DHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 195 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
...+.|++++..+........ ...+..+...+.|.|......| |.|+|.|.|..+.......|.
T Consensus 163 ~~~v~W~~~g~~~~~~~~~~~--~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~ 226 (232)
T 3qhz_H 163 PVTVSWNSGALTSGVHTFPAV--LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 226 (232)
T ss_dssp CCEEEEGGGTBCTTEEECCCE--ECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred CeEEEEEECCEecceeeccce--eCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeC
Confidence 367889998864322111111 1222334455789999998888 999999999887766555554
No 247
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.79 E-value=6.2e-19 Score=137.69 Aligned_cols=185 Identities=15% Similarity=0.190 Sum_probs=108.5
Q ss_pred CeeEecCCceEe--cCCCeEEEEEEEEecC----CCeeEEeeCCeeCCCCCcE-EEEecCCe----EEEEEccCCCCCCe
Q psy1095 66 PRFYAVPHNKIC--DLGDTVRFQCSVTGQP----APWTSWSKDGKPATPNARV-TIREKEDL----RFLEISEVTLEDAG 134 (325)
Q Consensus 66 p~~~~~~~~~~v--~~g~~v~l~C~~~~~p----~~~v~W~~~~~~~~~~~~~-~~~~~~~~----~~l~i~~~~~~d~G 134 (325)
|.+...|....+ .+|+++.|.|.+.+.+ .+.|.|+|++.++...... .....++. ..|.|......|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 555544444433 7999999999998864 3499999999876543110 01111221 12333333334599
Q ss_pred EEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCc
Q psy1095 135 LYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMK 214 (325)
Q Consensus 135 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 214 (325)
.|+|.+.|..+.......+.. ......+|.+...........|..+.|.|.+.|.+++.+.+.|+++|..+.......
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~--~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 159 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISK--AKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP 159 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECC--CCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred eEEEEEEcCcCCcceEEEecc--CCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccC
Confidence 999999988764322222211 001123455544333222234667999999999655325999999998875321111
Q ss_pred eEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 215 PEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 215 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
.. ...+..+...+.|.|......|.|.|+|.|.|....
T Consensus 160 ~~-~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 160 PV-LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp CE-ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ce-ECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 11 112223334456777766667899999999997643
No 248
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.78 E-value=4e-18 Score=133.43 Aligned_cols=158 Identities=22% Similarity=0.344 Sum_probs=103.7
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCC---ceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDM---KPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+...... .......+ ......|.|.+++.+|+
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPT--PTIEWYKGGERVETDKDDPRSHRMLLPSG--SLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESC--CEEEEEETTEECCCTTTCTTCSEEECTTS--CEEESSCCCCSSCCCSC
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCC--CEEEEEECCEEeeccccccccceEEecCC--cEEEEEEEecCCCcccC
Confidence 466777777788999999999999998887 899999999887643321 11111111 11223455677899999
Q ss_pred eEEEEEEEeCCCcE-EeEEEEEEEeeCCeec--------CCCCce-------------E-EEEeCC-------------E
Q psy1095 241 GEFTCRVANELGEV-VTSACLIVDVVKGKDL--------TSDGRL-------------N-IITVGG-------------T 284 (325)
Q Consensus 241 G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~--------~~~~~~-------------~-~~~~~~-------------~ 284 (325)
|.|+|.+.|..+.. ...+.|.|...+.... ..+... . .+..++ .
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~ 164 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRG 164 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEET
T ss_pred eEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccC
Confidence 99999999988765 3345555533221100 000000 0 011111 1
Q ss_pred EEEEEcCCCCCCCeEEEEEEECCCeeEEeE-EEEEEecccCC
Q psy1095 285 SVLTIEDITGDDSGKYQVHVSNQHGSDSCY-ASVAVEGRKII 325 (325)
Q Consensus 285 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~i 325 (325)
..|.|.++..+|+|.|+|.|.|..|..... +.|.|.++|.|
T Consensus 165 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 165 GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSF 206 (212)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchH
Confidence 269999999999999999999999987765 89999999865
No 249
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.78 E-value=2.5e-19 Score=142.57 Aligned_cols=204 Identities=15% Similarity=0.158 Sum_probs=113.3
Q ss_pred CCccccccccccc--cccc-CCCCeeEecCCceE-ecCCCeEEEEEEEEecC----CCeeEEeeCCeeCCCCCcEE--EE
Q psy1095 46 RTFTPYSLNSAIR--TRRL-TSSPRFYAVPHNKI-CDLGDTVRFQCSVTGQP----APWTSWSKDGKPATPNARVT--IR 115 (325)
Q Consensus 46 G~Y~c~~~~~~~~--~~~~-~~~p~~~~~~~~~~-v~~g~~v~l~C~~~~~p----~~~v~W~~~~~~~~~~~~~~--~~ 115 (325)
|.|.|...+.... ...+ ..|+.++..|.... +..|+.++|.|.+.+.+ ...|+|+++|..+....... ..
T Consensus 1 ~~~~~~~~~~~~~c~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~ 80 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ 80 (240)
T ss_dssp ----------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC
T ss_pred CceeeeeeecCCCCCccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceEC
Confidence 6788887664431 1222 23444455555555 66799999999999853 34799999999875431110 11
Q ss_pred ecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecC
Q psy1095 116 EKED---LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVP 192 (325)
Q Consensus 116 ~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~ 192 (325)
.++. ...|.|.....+|.|.|+|.+.+..+.......+.. ......+|.+...........|+.+.|.|.+.+++
T Consensus 81 ~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~--~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~ 158 (240)
T 4acp_A 81 YNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK--AKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFY 158 (240)
T ss_dssp ---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECC--CCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEB
T ss_pred CCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccc--cCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEe
Confidence 1111 135777777777889999999987653222222211 01112456666554443334588999999999965
Q ss_pred CCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 193 PNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 193 ~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
+....+.|++++..+......... ...+..+...+.|.+......+.|.|+|.|.+..-
T Consensus 159 P~~i~v~W~k~g~~~~~~~~~~~~-~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 159 PSDIAVEWESNGQPENNYKATPPV-LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp SSCCEEEEEETTEECSSEEECCCE-ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCcEEEEEECCEECCCcCccCce-ECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 543689999999886422111111 11222344556788877666778999999998754
No 250
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.78 E-value=7.3e-18 Score=135.21 Aligned_cols=188 Identities=14% Similarity=0.235 Sum_probs=120.1
Q ss_pred EecCCceEecCCCeEEEEEEEEe--cCCCeeEEeeCC--ee---C--------------CCCCcEEEEec--CCeEEEEE
Q psy1095 69 YAVPHNKICDLGDTVRFQCSVTG--QPAPWTSWSKDG--KP---A--------------TPNARVTIREK--EDLRFLEI 125 (325)
Q Consensus 69 ~~~~~~~~v~~g~~v~l~C~~~~--~p~~~v~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i 125 (325)
...|.+..+.+|++|+|.|.+.+ .+...+.||+.. .. + ....++.+..+ ....+|.|
T Consensus 3 l~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (248)
T 3u2s_H 3 LVESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQM 82 (248)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred eecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEE
Confidence 35567788999999999999975 235679999742 10 1 01245555432 34678999
Q ss_pred ccCCCCCCeEEEEEEEeCC----------------------eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEE
Q psy1095 126 SEVTLEDAGLYTIKVENNY----------------------GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVT 183 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~~----------------------~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~ 183 (325)
.+++.+|+|.|.|.+.+.. ........|.|... ...+|.+........+..|+.+.
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~--~~~~P~v~~~~~~~~~~~g~~~~ 160 (248)
T 3u2s_H 83 NSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSA--STKGPSVFPLAPSSKSTSGGTAA 160 (248)
T ss_dssp CSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSC--CCBCCEEEEECCC------CEEE
T ss_pred CCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEccc--CCCCCEEEEeCCCccccCCCcEE
Confidence 9999999999999997631 11222345666532 12456666444444556799999
Q ss_pred EEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 184 FECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 184 l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
|.|.+.+..+....+.|++++..+....... ....+..+...+.|.|......| |.|+|.|.|..+.......+.
T Consensus 161 L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~--~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 235 (248)
T 3u2s_H 161 LGCLVKDYFPEPVTVSWNSGALTSGVHTFPA--VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 235 (248)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCTTEEECCC--EECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEeeEECCCeEEEEeECCccCceeecCc--eECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEc
Confidence 9999998655347899999886432211111 11223344455789999888888 999999999877665544443
No 251
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.78 E-value=6.5e-18 Score=115.30 Aligned_cols=94 Identities=33% Similarity=0.607 Sum_probs=83.7
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC--cEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA--RVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.||.|...|.+..+.+|+++.|.|.+.|.|.|.++|++++..+.... ++.+...++..+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 46888888889999999999999999999999999999999987543 6677777778899999999999999999999
Q ss_pred eCCeeEEEEEEEEEEC
Q psy1095 142 NNYGSVEATARLEIMD 157 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~ 157 (325)
|..|.....+.|.|..
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 9999988888888753
No 252
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=140.32 Aligned_cols=184 Identities=14% Similarity=0.275 Sum_probs=118.8
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee---C---CC---------CC-cEEEEecCCeEEEEEccCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP---A---TP---------NA-RVTIREKEDLRFLEISEVT 129 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~---~---~~---------~~-~~~~~~~~~~~~l~i~~~~ 129 (325)
+...|....+.+|++++|.|.+.+.+.+.+.|||.. .. + .. .. ++.+....... |.|.+++
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~ 82 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVAN 82 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEES
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCC
Confidence 455677788999999999999888888899999831 11 0 00 01 44444333333 9999999
Q ss_pred CCCCeEEEEEEEeCCe------eEEEEEEEEEECCCcccCCCeeeecC-cCeeEecCCcEEEEEEEEecCCCCCeeEEee
Q psy1095 130 LEDAGLYTIKVENNYG------SVEATARLEIMDPRAIISRPKVLNGL-ENLRCCDGDSVTFECQVQVVPPNDHDISWFR 202 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~p~~~~~~-~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~ 202 (325)
.+|+|.|.|.+.+..+ .......|.|........+|.+.... ....+..|+.++|.|.+.+.++....+.|++
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k 162 (253)
T 3to4_D 83 MSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 162 (253)
T ss_dssp CSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEE
Confidence 9999999999986532 22233466676533223445554332 2222335789999999999554324899999
Q ss_pred CCEEeccCCCCceEEEe-----cCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCCC
Q psy1095 203 NNRLIKLDSDMKPEVQV-----DSKENLVIARLKIPHVYPED-EGEFTCRVANELG 252 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 252 (325)
+|..+............ .+..+...+.|.|.....+| .|.|+|.|.+...
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l 218 (253)
T 3to4_D 163 NGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (253)
T ss_dssp TTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCC
Confidence 99988643211100000 22233345688888887777 7799999998653
No 253
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=1.1e-17 Score=132.82 Aligned_cols=181 Identities=13% Similarity=0.171 Sum_probs=116.0
Q ss_pred eEecCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--ee---C-----C--------CCCcEEEEecC--CeEEEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KP---A-----T--------PNARVTIREKE--DLRFLEI 125 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~---~-----~--------~~~~~~~~~~~--~~~~l~i 125 (325)
+...|....+.+|++++|.|.+.+. +.+.+.|||.. .. + . ...++.+..+. +..+|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 4556777889999999999999764 56789999842 11 1 0 12455554322 4578999
Q ss_pred ccCCCCCCeEEEEEEEeC--Ce--eEEEEEEEEEECCCc-----ccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC
Q psy1095 126 SEVTLEDAGLYTIKVENN--YG--SVEATARLEIMDPRA-----IISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH 196 (325)
Q Consensus 126 ~~~~~~d~G~Y~C~~~~~--~~--~~~~~~~l~v~~~~~-----~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~ 196 (325)
.+++.+|+|.|.|.+.+. .. .......|.|..... ....+.+.. +....+..|+.++|.|.+.+..+..+
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~-p~~~~v~~g~~~~L~C~~~g~~P~~~ 162 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFL-PSVAETNLHKTGTYLCLLEAFFPDVI 162 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEEC-CCHHHHHHHSCEEEEEEEEEESSCCC
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEEC-CCchhhccCCcceEEEEEeeecCCCe
Confidence 999999999999999874 11 122335677762110 011222222 22233456889999999998743336
Q ss_pred eeEEee-CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 197 DISWFR-NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 197 ~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
.+.|++ ++..+......... ..+..+...+.|.|..... + |.|+|.+.|....
T Consensus 163 ~v~W~~~~g~~l~~~~~~~~~--~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 163 RVYWKEKDGNTILDSQEGDTL--KTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEEEECTTSSCBCCCEECCCE--EETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEEEccCCeEccccccceee--cCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 999999 77665432111111 2222333456899988775 4 8999999998764
No 254
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.77 E-value=2.2e-17 Score=129.79 Aligned_cols=153 Identities=20% Similarity=0.358 Sum_probs=104.1
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ......|.|.+++.+|+|.
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~--~~v~W~~~g~~~~~~~~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~ 83 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPE--PTIEWFKDGEPVSTNEKKSHRVQFKD--GALFFYRTMQGKKEQDGGE 83 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSC--CEEEEEETTEECCCSSSSSSEEECTT--SCEEESSCCBSSSCBCCEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCC--CeEEEEECCcCccCCCccceeEEecC--CceEEEEEeccCCcccCce
Confidence 4678888888888999999999999998877 89999999998875533222222222 1122334788999999999
Q ss_pred EEEEEEeCCCcEE-eEEEEEEEeeCCee--------cCC-----------CC----ceEEEEeC----------------
Q psy1095 243 FTCRVANELGEVV-TSACLIVDVVKGKD--------LTS-----------DG----RLNIITVG---------------- 282 (325)
Q Consensus 243 Y~C~~~~~~~~~~-~~~~l~v~~~~~~~--------~~~-----------~~----~~~~~~~~---------------- 282 (325)
|+|.+.|..+... ..+.|.|...++.. +.. .+ .+. +..+
T Consensus 84 Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~-W~~~g~~~~~~~~~~~~~~~ 162 (217)
T 2vr9_A 84 YWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLI-WIKDGVPLDDLKAMSFGASS 162 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEE-EEETTEEECCCCCC---CCC
T ss_pred EEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEE-EEECCcCCCcccccccccCC
Confidence 9999999887653 24445443321110 000 00 000 1111
Q ss_pred -----CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 283 -----GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 283 -----~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
....|.|.++..+|+|.|+|.|.|..|....++.+.+.
T Consensus 163 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 163 RVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp SEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 11269999999999999999999999999888655554
No 255
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.76 E-value=6e-18 Score=136.27 Aligned_cols=186 Identities=12% Similarity=0.207 Sum_probs=119.5
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee---C------------CCCCcEEEEec-CCeEEEEEccC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP---A------------TPNARVTIREK-EDLRFLEISEV 128 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~---~------------~~~~~~~~~~~-~~~~~l~i~~~ 128 (325)
.+...|....+.+|++++|.|.+. .+.+.+.||++. .. + ....++.+... ....+|.|.++
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 456667788899999999999985 457899999853 11 0 01235554432 33467999999
Q ss_pred CCCCCeEEEEEEEeCC---eeEEEEEEEEEECCCcccCCCeeeec-CcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC
Q psy1095 129 TLEDAGLYTIKVENNY---GSVEATARLEIMDPRAIISRPKVLNG-LENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN 204 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~---~~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~ 204 (325)
+.+|+|.|.|.+.+.. ........|.|........+|.+... +....+..|+.+.|.|.+.+.++..+.+.|++++
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 163 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 163 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 9999999999998751 11222345666653222235655443 2222345689999999999864422589999999
Q ss_pred EEeccCCCCc--eEE--E-ecCCcceeEEEEEeCCCCCC-CCeEEEEEEEeCCCc
Q psy1095 205 RLIKLDSDMK--PEV--Q-VDSKENLVIARLKIPHVYPE-DEGEFTCRVANELGE 253 (325)
Q Consensus 205 ~~~~~~~~~~--~~~--~-~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~ 253 (325)
..+....... ... . ..+..+...+.|.|...... |.|.|+|.+.|....
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 164 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 8876432110 000 0 01223334567888776654 678999999997644
No 256
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.76 E-value=1.9e-19 Score=139.70 Aligned_cols=117 Identities=9% Similarity=-0.032 Sum_probs=91.1
Q ss_pred CCCCCcccCCCCCCCcccccccccccc-----cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCC
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPAT 107 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~ 107 (325)
.+|.|.+++++|+|.|+|.+.+..+.. +.+..||.+...+....+.+|+++.|.|.+.|.|.|.++|++++..+.
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~ 148 (203)
T 4fa8_A 69 FFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEP 148 (203)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-----
T ss_pred EEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeec
Confidence 468899999999999999998765532 344577888888888889999999999999999999999998765442
Q ss_pred ----CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 108 ----PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 108 ----~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
...++.+..++....+.+.+++.+|+|.|+|.+.|..|....
T Consensus 149 ~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 149 APTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp -------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 234555555555566777899999999999999999997654
No 257
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.76 E-value=1.8e-17 Score=131.50 Aligned_cols=188 Identities=14% Similarity=0.249 Sum_probs=121.7
Q ss_pred ecCCceEecCCCeEEEEEEEEe--cCCCeeEEeeCC--e---eC---C-----------CCCcEEEEec--CCeEEEEEc
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTG--QPAPWTSWSKDG--K---PA---T-----------PNARVTIREK--EDLRFLEIS 126 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~--~p~~~v~W~~~~--~---~~---~-----------~~~~~~~~~~--~~~~~l~i~ 126 (325)
..|....+.+|++|+|.|.+.+ .+...+.|||.. . .+ . ...++.+..+ ....+|.|.
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (230)
T 3n9g_H 5 VQSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELS 84 (230)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 3445677999999999999975 234678999732 1 01 0 1235555433 346679999
Q ss_pred cCCCCCCeEEEEEEEeCC-------e-eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCee
Q psy1095 127 EVTLEDAGLYTIKVENNY-------G-SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDI 198 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~-------~-~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~ 198 (325)
+++.+|+|.|.|.+.+.. . .......|.|...+ ..+|.+........+..|+.+.|.|.+.+.++..+.+
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v 162 (230)
T 3n9g_H 85 SLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 162 (230)
T ss_dssp SCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC--CBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEE
T ss_pred CCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC--CCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEE
Confidence 999999999999998653 1 11233456665322 2346655444444456899999999999865534789
Q ss_pred EEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 199 SWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 199 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.| ++..+.............+..+...+.|.|.....+| |.|+|.|.+..+.......+.+
T Consensus 163 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v 223 (230)
T 3n9g_H 163 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 223 (230)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccC
Confidence 99 4444322111000111223344455789999999999 9999999998877665555544
No 258
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.76 E-value=2.7e-17 Score=126.55 Aligned_cols=151 Identities=20% Similarity=0.205 Sum_probs=100.3
Q ss_pred CeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee-CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 165 PKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR-NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 165 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+.+...+....+.+|+.+.|.|.+.+.++. +.+.|++ ++..+.............. ....|.|.+++.+|+|.|
T Consensus 3 ~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~-~~v~W~~~~g~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y 77 (191)
T 1epf_A 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKD-KDISWFSPNGEKLSPNQQRISVVWNDD----DSSTLTIYNANIDDAGIY 77 (191)
T ss_dssp CCEEEESSSEEEETTCCEEEEEEECCCSCC-CEEEEECTTSCEECCBSSSEEEEEEET----TEEEEEECSCCGGGCEEE
T ss_pred eEEEecCCCcEEcCCCCEEEEEECCCCCCC-ceEEEEeCCCccccCCCCeEEEEECCC----CceEEEEccCCcccCEEE
Confidence 455566677889999999999999887632 8999999 7777763322111111111 346899999999999999
Q ss_pred EEEEEeCC-CcEEeEEEEEEEeeCCe-------ecCCCCce------------E-EEEeC---------------CEEEE
Q psy1095 244 TCRVANEL-GEVVTSACLIVDVVKGK-------DLTSDGRL------------N-IITVG---------------GTSVL 287 (325)
Q Consensus 244 ~C~~~~~~-~~~~~~~~l~v~~~~~~-------~~~~~~~~------------~-~~~~~---------------~~~~l 287 (325)
+|.+.+.. +.....+.|.|...+.. .+..+... . .+..+ ....|
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L 157 (191)
T 1epf_A 78 KCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYL 157 (191)
T ss_dssp EEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCE
T ss_pred EEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeE
Confidence 99999988 44555555655322111 11101000 0 11111 11269
Q ss_pred EEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 288 TIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 288 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
.|.++..+|+|.|+|.|.|..|.......+.|.
T Consensus 158 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp EETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred EECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 999999999999999999999766666666553
No 259
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.76 E-value=2.4e-17 Score=125.85 Aligned_cols=147 Identities=20% Similarity=0.320 Sum_probs=100.1
Q ss_pred CeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEE
Q psy1095 165 PKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFT 244 (325)
Q Consensus 165 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 244 (325)
|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+......... ..+ ......|.|.+++.+|+|.|+
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~--~~v~W~k~~~~~~~~~~~~~~--~~~--~~~~~~L~i~~~~~~d~G~Y~ 76 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEE--PDIQWVKDGAVVQNLDQLYIP--VSE--QHWIGFLSLKSVERSDAGRYW 76 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSS--CCEEEEETTEECCSSEEEEEE--EET--TEEEEEEEESSCCGGGCEEEE
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCC--CeEEEEECCeecCCCCceEEE--ecC--CCceEEEEEeecCcccCeEEE
Confidence 44555556778899999999999998777 789999999888655332222 111 113478999999999999999
Q ss_pred EEEEeCCCc-EEeEEEEEEEeeCCee-------cC--------------CCC-ceEEEEeC---------CEEEEEEcCC
Q psy1095 245 CRVANELGE-VVTSACLIVDVVKGKD-------LT--------------SDG-RLNIITVG---------GTSVLTIEDI 292 (325)
Q Consensus 245 C~~~~~~~~-~~~~~~l~v~~~~~~~-------~~--------------~~~-~~~~~~~~---------~~~~l~i~~v 292 (325)
|.+.+..+. ....+.|.|...+... +. +.. .+. +..+ ....|.|.++
T Consensus 77 C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~-W~~~~~~~~~~~~~~~~L~i~~~ 155 (182)
T 1rhf_A 77 CQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIV-WWRGTTKIGGPAPSPSVLNVTGV 155 (182)
T ss_dssp EEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEE-EEETTEECSCSEESSEEEEECCC
T ss_pred EEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEE-EEcCCeECCCCCCCceEEEEecc
Confidence 999998664 3345666664322111 11 111 111 1122 3357999988
Q ss_pred CCCCCeEEEEEEECCCeeEEe-EEEEEEe
Q psy1095 293 TGDDSGKYQVHVSNQHGSDSC-YASVAVE 320 (325)
Q Consensus 293 ~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~ 320 (325)
+|+|.|+|.|.|..|.... .+.|.|+
T Consensus 156 --~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 156 --TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp --SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred --ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 5899999999999998864 7888875
No 260
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.76 E-value=4e-18 Score=132.22 Aligned_cols=142 Identities=19% Similarity=0.233 Sum_probs=108.0
Q ss_pred eeeecccCCCCcccC----CCCCCCCCCCCCcccCCCCCCCcccccccccccccc---------------cCCCCeeEec
Q psy1095 11 LSVKLTRPSGLMSGH----STPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRTRR---------------LTSSPRFYAV 71 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~----~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~---------------~~~~p~~~~~ 71 (325)
..+.|.+++..+... ........+|.|.+++.+|+|.|+|.+.+....... ...+|.+...
T Consensus 40 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 119 (201)
T 3s97_C 40 LSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQ 119 (201)
T ss_dssp CEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEE
T ss_pred eEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEec
Confidence 567788777665321 122334567999999999999999999875432211 1135667666
Q ss_pred CCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 72 PHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+ ... ....|.|.+++.+|+|.|+|.+.|..|.....+
T Consensus 120 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 195 (201)
T 3s97_C 120 FKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--IST--SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQA 195 (201)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--EET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--ecC--CCCEEEEccCChhhCEEEEEEEEecCCceeeeE
Confidence 6677899999999999999999999999999997765422 222 224799999999999999999999999888888
Q ss_pred EEEEE
Q psy1095 152 RLEIM 156 (325)
Q Consensus 152 ~l~v~ 156 (325)
.|.|.
T Consensus 196 ~l~V~ 200 (201)
T 3s97_C 196 RIYVQ 200 (201)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88775
No 261
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.75 E-value=1.9e-17 Score=128.86 Aligned_cols=141 Identities=21% Similarity=0.265 Sum_probs=97.8
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
.|.+...+....+.+|+.+.|.|.+.+.+.+ ..+.|++++..+.... ..|.|.+++.+|+|.|
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~-~~v~W~k~g~~l~~~~----------------~~L~i~~v~~~D~G~Y 69 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPED-QSTQWFHNESLISSQA----------------SSYFIDAATVDDSGEY 69 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSC-CCEEEEETTEEESCCS----------------SEEEESSCCGGGCEEE
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCC-cEEEEEECCEEcccCc----------------cEEEEecccccCCEEE
Confidence 4666666666789999999999999987762 3599999998876432 3799999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEeeC------CeecCCCCc-------------e-EEEEeCC--------EEEEEEcCCCCC
Q psy1095 244 TCRVANELGEVVTSACLIVDVVK------GKDLTSDGR-------------L-NIITVGG--------TSVLTIEDITGD 295 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~~------~~~~~~~~~-------------~-~~~~~~~--------~~~l~i~~v~~~ 295 (325)
+|.+.|.. ....+.|.|...+ ...+..+.. . ..+..++ ...|.|.++..+
T Consensus 70 ~C~a~n~~--~s~~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~ 147 (204)
T 3sgj_C 70 RCQTQLST--LSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLK 147 (204)
T ss_dssp EEEETTSB--CCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGG
T ss_pred EEEeCCCc--ccccEEEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcc
Confidence 99998743 3334455553221 101100000 1 1111121 236999999999
Q ss_pred CCeEEEEEEEC-CCeeEEeEEEEEEeccc
Q psy1095 296 DSGKYQVHVSN-QHGSDSCYASVAVEGRK 323 (325)
Q Consensus 296 d~G~Y~C~a~n-~~g~~~~~~~l~V~~~p 323 (325)
|+|.|+|.|.| ..+..+..+.|.|.++|
T Consensus 148 D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 148 DSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 99999999999 55566677899998755
No 262
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.75 E-value=2.4e-17 Score=128.97 Aligned_cols=148 Identities=20% Similarity=0.237 Sum_probs=99.0
Q ss_pred eeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEec----------cCCCCceEEEecCCcceeEEEEEeCCC
Q psy1095 166 KVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIK----------LDSDMKPEVQVDSKENLVIARLKIPHV 235 (325)
Q Consensus 166 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~i~~~ 235 (325)
.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+. .....+.. . ....|.|.++
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~--~------~~~~L~i~~v 72 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSS--PRVEWKFVQGSTTALVCYNSQITAPYADRVT--F------SSSGITFSSV 72 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSS--EEEEEEEEETTEEEEEEETTEECGGGTTTEE--E------ETTEEEESCC
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCC--cEEEEEECCCceeeEEecCCcccccccCcEE--e------eceeEEEccc
Confidence 3444556678899999999999998776 8999999765421 11111111 1 1158999999
Q ss_pred CCCCCeEEEEEEEeCCC--cEEeEEEEEEEeeCCeec-------C-----------CC----CceEE-------------
Q psy1095 236 YPEDEGEFTCRVANELG--EVVTSACLIVDVVKGKDL-------T-----------SD----GRLNI------------- 278 (325)
Q Consensus 236 ~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~-------~-----------~~----~~~~~------------- 278 (325)
+.+|+|.|+|.+.+..+ .....+.|.|...+.... . .. ..+..
T Consensus 73 ~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~ 152 (212)
T 1f97_A 73 TRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAK 152 (212)
T ss_dssp CGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC----
T ss_pred CcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccc
Confidence 99999999999999876 445555666543321100 0 00 00000
Q ss_pred ----------EEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeE--EeEEEEEEeccc
Q psy1095 279 ----------ITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSD--SCYASVAVEGRK 323 (325)
Q Consensus 279 ----------~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p 323 (325)
........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~ 209 (212)
T 1f97_A 153 KTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVELN 209 (212)
T ss_dssp -CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESSC
T ss_pred ccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEee
Confidence 011223469999999999999999999999988 556777777643
No 263
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.74 E-value=2.6e-17 Score=148.57 Aligned_cols=169 Identities=13% Similarity=0.281 Sum_probs=121.0
Q ss_pred ceEecCCCeEEEEEEE-EecCCCeeEEeeCCeeCCC------------CCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 74 NKICDLGDTVRFQCSV-TGQPAPWTSWSKDGKPATP------------NARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
...+.+|++++|.|.+ .+.|.+.++|++++..+.. ..+..+... .+|.|.+++.+|+|.|+|.+
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPN---GSLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTT---SCEEESSCCGGGCEEEEEEE
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCC---ceEEEeccccccCeEEEEEE
Confidence 4568899999999998 7788899999998753211 112232222 26999999999999999999
Q ss_pred EeCCeeE-EEEEEEEEECCCcccCCCeeeecCcCeeEecCCcE-EEEEEEEec-CCCCCeeEEeeCCEEeccCCCCceEE
Q psy1095 141 ENNYGSV-EATARLEIMDPRAIISRPKVLNGLENLRCCDGDSV-TFECQVQVV-PPNDHDISWFRNNRLIKLDSDMKPEV 217 (325)
Q Consensus 141 ~~~~~~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v-~l~C~~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~ 217 (325)
.+..+.. ...+.|.|...+. .|.+.... ..+..|... .|.|.+.+. |. +.+.|++++..+..........
T Consensus 452 ~n~~~~~~~~~~~l~V~~~~~---~p~i~~~~--~~~~~~~~~~~l~C~~~~~~P~--~~i~W~~~g~~l~~~~~~~~~~ 524 (581)
T 3o3u_N 452 MNRNGKETKSNYRVRVYQIPG---KPEIVDSA--SELTAGVPNKVGTCVSEGSYPA--GTLSWHLDGKPLVPNEKGVSVK 524 (581)
T ss_dssp ECTTSCEEEEEEEEEEEBCCC---CCEEESCC--SEECTTSCEEEEEEEEEEEBSC--CEEEEEETTEECCTTSTTEEEE
T ss_pred EcCCCceeEEEEEEEEEcCCC---CCEEEcCC--cccccCCceeEEEEECCCCCCC--CeEEEEECCEECCCCCCeEEEE
Confidence 9988766 6778888877532 34443322 235555554 569999984 76 8999999999987543322111
Q ss_pred ---Ee--cCCcceeEEEEEeCCCC-CCCCeEEEEEEEeCCC
Q psy1095 218 ---QV--DSKENLVIARLKIPHVY-PEDEGEFTCRVANELG 252 (325)
Q Consensus 218 ---~~--~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~ 252 (325)
.. +...+...+.|.|.+++ .++.|.|+|.|.|...
T Consensus 525 ~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 525 EQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp EEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred eeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 11 33456677899999998 4558899999999864
No 264
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.74 E-value=5.7e-17 Score=128.27 Aligned_cols=182 Identities=15% Similarity=0.268 Sum_probs=114.7
Q ss_pred cCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--ee---C--------------CCCCcEEEEec--CCeEEEEEcc
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KP---A--------------TPNARVTIREK--EDLRFLEISE 127 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~~ 127 (325)
.|....+.+|++|+|.|.+.+. +...+.||+.. .. + ....++.+..+ ....+|.|.+
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (226)
T 3mlr_H 6 ESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTT 85 (226)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESS
T ss_pred cCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECC
Confidence 3446789999999999999753 34679999842 11 0 01135554432 2457799999
Q ss_pred CCCCCCeEEEEEEEeCCe---------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCee
Q psy1095 128 VTLEDAGLYTIKVENNYG---------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDI 198 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~---------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~ 198 (325)
++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+........+..|+.+.|.|.+.+.++..+.+
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~--~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v 163 (226)
T 3mlr_H 86 LQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 163 (226)
T ss_dssp CCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC--CBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEE
T ss_pred CCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC--CCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEE
Confidence 999999999999976421 11122355664322 2345555333333445799999999999866534789
Q ss_pred EEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeE
Q psy1095 199 SWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTS 257 (325)
Q Consensus 199 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 257 (325)
.| ++..+.............+..+...+.|.|.....+| |.|+|.+.|..+.....
T Consensus 164 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 164 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp EE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred EE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 99 3332221110000111222344455789999998889 99999999987765443
No 265
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.74 E-value=6.6e-17 Score=130.46 Aligned_cols=187 Identities=15% Similarity=0.288 Sum_probs=116.8
Q ss_pred cCCceEecCCCeEEEEEEEEec--CCCeeEEeeCC--ee---C--------------CCCCcEEEEec--CCeEEEEEcc
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQ--PAPWTSWSKDG--KP---A--------------TPNARVTIREK--EDLRFLEISE 127 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~~ 127 (325)
.|....+.+|++|+|.|.+.+. ....+.||+.. .. + ....++.+..+ .+..+|.|.+
T Consensus 29 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 108 (256)
T 3sob_H 29 ESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNS 108 (256)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECC
Confidence 3445678999999999999753 24678999732 11 0 01235555432 3456799999
Q ss_pred CCCCCCeEEEEEEEeCC-----------eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC
Q psy1095 128 VTLEDAGLYTIKVENNY-----------GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH 196 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~-----------~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~ 196 (325)
++.+|+|.|.|.+.+.. ........|.|...+ ..+|.+........+.+|+.++|.|.+.+..+..+
T Consensus 109 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~ 186 (256)
T 3sob_H 109 LRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 186 (256)
T ss_dssp CCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSC--CBCCEEEEECCC-----TTEEEEEEEEEEEBSSCC
T ss_pred CCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCC--CCCCEEEEECCCcccccCCcEEEEEEEEEEECCCe
Confidence 99999999999998642 112233456665322 24466654444445678999999999988655337
Q ss_pred eeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 197 DISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 197 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.+.| ++..+.............+..+...+.|.|.....+| |.|+|.+.+..+.......+.+
T Consensus 187 ~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 187 TVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp EEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 8999 4443322111000111223344455789999999999 9999999998876665555443
No 266
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.74 E-value=9.5e-18 Score=129.79 Aligned_cols=148 Identities=17% Similarity=0.208 Sum_probs=97.2
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+.. .+.+|+.++|.|.+.+ +. +.+.|+|++..+........ .. .....|.|.+++.+|+|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~--~~~~w~k~g~~~~~~~~~~~---~~----~~~~~L~i~~v~~~D~G~ 72 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EA--REYRLDKEESPAPWDRQNPL---EP----KNKARFSIPSMTEDYAGR 72 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TC--CEEEEEETTSCSCSEEECCC---SS----SSEEEEEESSCCGGGCEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CC--CEEEEEECCCCCcccccccc---cC----CceEEEEeccCCcccCce
Confidence 35677766665 7899999999999887 44 78999999876643111000 00 134689999999999999
Q ss_pred EEEEEEeCCCc--EEeEEEEEEEeeC---------CeecCCCCceEE------------E-----------------EeC
Q psy1095 243 FTCRVANELGE--VVTSACLIVDVVK---------GKDLTSDGRLNI------------I-----------------TVG 282 (325)
Q Consensus 243 Y~C~~~~~~~~--~~~~~~l~v~~~~---------~~~~~~~~~~~~------------~-----------------~~~ 282 (325)
|+|.+.|..+. ....+.|.|.... ...+..+..+.+ + ...
T Consensus 73 Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~ 152 (196)
T 3p2t_A 73 YRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQ 152 (196)
T ss_dssp EEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEEEEEEEEEETTCCCGGGSEEEEEEEEE
T ss_pred EEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCCCCEEEEEeCCCcccceeecccccccC
Confidence 99999998772 2334455553211 111111111110 1 111
Q ss_pred CEEEEEEcCCCCCCCeEEEEEEECCCe-----eEEeEEEEEEec
Q psy1095 283 GTSVLTIEDITGDDSGKYQVHVSNQHG-----SDSCYASVAVEG 321 (325)
Q Consensus 283 ~~~~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~ 321 (325)
....|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.+
T Consensus 153 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~G 196 (196)
T 3p2t_A 153 HQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVSG 196 (196)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC-
T ss_pred cceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeCC
Confidence 235799999999999999999999986 334457777754
No 267
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.74 E-value=9.4e-17 Score=112.66 Aligned_cols=98 Identities=27% Similarity=0.403 Sum_probs=88.2
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..||.|...|....+.+|+++.|.|.+.+.|.+.+.|+|++..+....++.+........|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 35888888888999999999999999999999999999999999887788877766678899999999999999999999
Q ss_pred CCeeEEEEEEEEEECCCc
Q psy1095 143 NYGSVEATARLEIMDPRA 160 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~ 160 (325)
..|.....+.|.|...+.
T Consensus 85 ~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp SSCEEECCEEEEEECSCS
T ss_pred CCCcEEEEEEEEEECCCC
Confidence 999888889999987654
No 268
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=2.4e-17 Score=126.15 Aligned_cols=142 Identities=18% Similarity=0.222 Sum_probs=108.6
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCccccccccccc--ccccCCCCeeEecCCceEecCCCeEEEEEEE
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIR--TRRLTSSPRFYAVPHNKICDLGDTVRFQCSV 89 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~--~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~ 89 (325)
.+.|.+++..+....... ....+.|. +.+|+|.|+|.+.+.... ...+..+|.+...+....+.+|+.+.|.|.+
T Consensus 31 ~~~W~k~~~~l~~~~~~~-~~~~l~i~--~~~d~G~Y~C~~~n~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~ 107 (184)
T 3b5h_A 31 GHRWLKGGVVLKEDALPG-QKTEFKVD--SDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKS 107 (184)
T ss_dssp EEEEESSSEEEECTTCCC-SEEEEEEC--GGGCCEEEEEEEESTTSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEEC
T ss_pred EEEEEeCCEEeecccccC-CcEEEEEe--chhhCeEEEEEEECCcCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEE
Confidence 677888776665443221 12244455 689999999999863332 3455588988888888889999999999999
Q ss_pred EecC-CCeeEEee---CC-eeCCCC--CcEEEEecCCeEEEEEccCC-CCCCeEEEEEEEeCCeeEEEEEEEEEE
Q psy1095 90 TGQP-APWTSWSK---DG-KPATPN--ARVTIREKEDLRFLEISEVT-LEDAGLYTIKVENNYGSVEATARLEIM 156 (325)
Q Consensus 90 ~~~p-~~~v~W~~---~~-~~~~~~--~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 156 (325)
.+.| .+.+.|++ ++ ..+... .++.+...+....|.|.+++ .+|+|.|+|.+.|..|.....+.|.|.
T Consensus 108 ~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 108 ESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 9998 79999999 44 444322 56777666667789999999 999999999999999988888888775
No 269
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.73 E-value=2.3e-16 Score=121.07 Aligned_cols=143 Identities=18% Similarity=0.267 Sum_probs=95.9
Q ss_pred eecCcCeeEecCCcEEEEEEEEecCCCCCeeEEee-CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEE
Q psy1095 168 LNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFR-NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCR 246 (325)
Q Consensus 168 ~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 246 (325)
...+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....+.... ..+ ....|.|.+++.+|+|.|+|.
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p~---~v~W~~~~~~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~d~G~Y~C~ 76 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEPE---SIDWYNPQGEKIISTQRVVVQ--KEG----VRSRLTIYNANIEDAGIYRCQ 76 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECCS---EEEEECTTSCBCCCCSSEEEE--EET----TEEEEEECSCCGGGCEEEEEE
T ss_pred EecCCceEEecCCcEEEEEEeecCCe---eEEEEeCCCCccCCCceEEEE--CCC----CeEEEEEccCCcccCeEEEEE
Confidence 33445677889999999999988754 799999 66666544433322 222 346899999999999999999
Q ss_pred EEeCCCcE-EeEEEEEEEeeCCeecC---------------------CCCceEEEEe--------------CCEEEEEEc
Q psy1095 247 VANELGEV-VTSACLIVDVVKGKDLT---------------------SDGRLNIITV--------------GGTSVLTIE 290 (325)
Q Consensus 247 ~~~~~~~~-~~~~~l~v~~~~~~~~~---------------------~~~~~~~~~~--------------~~~~~l~i~ 290 (325)
+.+..+.. ...+.|.|...+..... +...+..... .....|.|.
T Consensus 77 ~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 156 (189)
T 2v44_A 77 ATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQIL 156 (189)
T ss_dssp EECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEET
T ss_pred EEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEE
Confidence 99988765 45556666432211100 0011111111 011269999
Q ss_pred CCCCCCCeEEEEEEECCCeeEEeEEEEEE
Q psy1095 291 DITGDDSGKYQVHVSNQHGSDSCYASVAV 319 (325)
Q Consensus 291 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 319 (325)
++..+|+|.|+|.|.|..|.......+.|
T Consensus 157 ~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 157 NINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp TCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999999976655444443
No 270
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.73 E-value=6.8e-17 Score=126.86 Aligned_cols=154 Identities=18% Similarity=0.319 Sum_probs=111.5
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+ ..+....+..|+.+.|.|.+.+.|. +.+.|++++..+.............+ ....|.|.+++.+|+|.|
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~--p~i~W~~~g~~l~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y 91 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPS--ATISWFRDGQLLPSSNYSNIKIYNTP----SASYLEVTPDSENDFGNY 91 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESC--CEEEEEETTEESSCSSSCSEEEEEET----TEEEEEECCCSGGGCEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCC--CEEEEEECCeECCCCCCccEEEecCC----CeeEEEEecCChhhCeEE
Confidence 3455 3444567889999999999999998 89999999998876543333322222 247899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEeeCCeecC-------------------CCC-ce---EEEEe-CC----------------
Q psy1095 244 TCRVANELGEVVTSACLIVDVVKGKDLT-------------------SDG-RL---NIITV-GG---------------- 283 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~-------------------~~~-~~---~~~~~-~~---------------- 283 (325)
+|.|.|..|.....+.|.+...+..+.. .++ .. .+... .+
T Consensus 92 ~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~ 171 (215)
T 3mtr_A 92 NCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 171 (215)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHH
T ss_pred EEEEEECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccc
Confidence 9999999998888777777433322100 011 11 11111 11
Q ss_pred EEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecccC
Q psy1095 284 TSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRKI 324 (325)
Q Consensus 284 ~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 324 (325)
...|.|.++...+.|.|+|.|.|..|....+..+.|+-+|.
T Consensus 172 ~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp HTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred cccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 04699999999999999999999999998888888876663
No 271
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.73 E-value=7.5e-19 Score=143.02 Aligned_cols=247 Identities=11% Similarity=0.080 Sum_probs=87.6
Q ss_pred CCchhcccceeeecccCCCCccc-----CCCCC-CCC---CCCCCcccCCCCCCCcccccccccc-c----ccccCCCC-
Q psy1095 2 AIPEEKENSLSVKLTRPSGLMSG-----HSTPR-STP---RSTPPRSISPLSSRTFTPYSLNSAI-R----TRRLTSSP- 66 (325)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~---~~l~i~~v~~~d~G~Y~c~~~~~~~-~----~~~~~~~p- 66 (325)
.++.|+.-.|+++-..+.....+ ..... ... ..+.|++++. .|.|.|++..... . ...+..+|
T Consensus 10 ~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~--~~~y~C~~~~~~~~~~~~v~l~V~~~P~ 87 (291)
T 1mq8_A 10 ILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQE--DSQPMCYSNCPDGQSTAKTFLTVYWTPE 87 (291)
T ss_dssp EECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCS--CCCCEEEEECSSCEEEEECEEEECBCCS
T ss_pred EEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCCceEEEEEEeccc--CCeEEEEEEcCCccEEEEEEEEEecCCC
Confidence 35677777887777655443111 11111 111 1256778774 3579999854421 1 12233334
Q ss_pred eeEecCCceEecCCCeEEEEEEEEe-cCCC--eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTG-QPAP--WTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+.+.+.+..+.+|+.++|.|.+.+ .|.. .|+|||+++.+.... ........+|.+.....+|.+.|+|++.+.
T Consensus 88 ~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~---~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~ 164 (291)
T 1mq8_A 88 RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGANFSCRTELD 164 (291)
T ss_dssp CCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE---CCBTTEEEEEECCCSSSCSSCEEEEEEEEE
T ss_pred CCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc---CCCCCceEEEEeeeeeccCCceEEEEEEec
Confidence 3334444445889999999999977 4544 589999997764321 011122345777666777777999999975
Q ss_pred Cee--------EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEeeCCEEeccCCCCc
Q psy1095 144 YGS--------VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWFRNNRLIKLDSDMK 214 (325)
Q Consensus 144 ~~~--------~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~~~~~~~~~~~~~ 214 (325)
.+. ..+...|.|.+.|.. .+.+.. ...+.+|+.++|.|.+.|.+++ .+.+.|+++|..+.....
T Consensus 165 l~~~g~~l~~~~s~~~~L~V~~~P~~--~~~~~~---p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~-- 237 (291)
T 1mq8_A 165 LRPQGLELFENTSAPYQLQTFVLPAT--PPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVT-- 237 (291)
T ss_dssp CGGGTSCEEEECCCCEECBC------------------------------------------------------------
T ss_pred CCccCCccccccccceEEEEEecCCC--CceecC---CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceee--
Confidence 431 234456777665321 112111 2257789999999999998663 347999999988764211
Q ss_pred eEEEecCCcceeEEEEEeCCC---CCC--CCeEEEEEEEeCCCcEEeEEEEEEEeeCCeec
Q psy1095 215 PEVQVDSKENLVIARLKIPHV---YPE--DEGEFTCRVANELGEVVTSACLIVDVVKGKDL 270 (325)
Q Consensus 215 ~~~~~~~~~~~~~~~l~i~~~---~~~--d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~ 270 (325)
.++ ..+.+... +.+ +.+.|+|.+.+..........|.|+..+++.+
T Consensus 238 ----~~g------~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~~~ 288 (291)
T 1mq8_A 238 ----YGN------DSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNV 288 (291)
T ss_dssp -------------------------------------------------------------
T ss_pred ----ecC------CeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCccE
Confidence 111 12222222 343 46677888887555566666777765555443
No 272
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.73 E-value=4.6e-17 Score=131.70 Aligned_cols=186 Identities=13% Similarity=0.223 Sum_probs=115.0
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C---C----------CCCcEEEEec--CCeEEEEEccC
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A---T----------PNARVTIREK--EDLRFLEISEV 128 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~---~----------~~~~~~~~~~--~~~~~l~i~~~ 128 (325)
.|....+.+|++|+|.|.+.+.+ ...+.|||.. .. + . ...++.+..+ ....+|.|.++
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (263)
T 3iu4_H 6 ESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSL 85 (263)
T ss_dssp EECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSC
T ss_pred CCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCC
Confidence 34467799999999999997533 4679999742 11 1 0 0235555432 34567999999
Q ss_pred CCCCCeEEEEEEEeCC-----e---eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEE
Q psy1095 129 TLEDAGLYTIKVENNY-----G---SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISW 200 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~~-----~---~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W 200 (325)
+.+|+|.|.|.+.+.. + .......|.|.... ..+|.+........+..|+.+.|.|.+.++++..+.+.|
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~--~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 86 QTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS--TKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp CGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC--CBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred CHHHCEEEEEEEEeCCCCccccccceeCCceEEEEeccc--CCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE
Confidence 9999999999998753 1 11123456665322 234665533334445689999999999987654478999
Q ss_pred eeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 201 FRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
++..+.............+..+...+.|.|.....+| |.|+|.+.|..+.......+.
T Consensus 164 --~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 164 --NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp --GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred --CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 4333321110000111223344455789999888888 999999999887655444443
No 273
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.73 E-value=7.6e-17 Score=137.37 Aligned_cols=181 Identities=15% Similarity=0.166 Sum_probs=117.3
Q ss_pred EecCCceE-ecCCCeEEEEEEEEec-CC---CeeEEeeCCeeCCCCCcE--EEEecC---CeEEEEEccCCCCCCeEEEE
Q psy1095 69 YAVPHNKI-CDLGDTVRFQCSVTGQ-PA---PWTSWSKDGKPATPNARV--TIREKE---DLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 69 ~~~~~~~~-v~~g~~v~l~C~~~~~-p~---~~v~W~~~~~~~~~~~~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C 138 (325)
+..|.... +.+|++++|.|.+.+. |. ..|+|++++..+...... .....+ ....|.|..++.+|.|.|+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 34444344 7889999999999886 32 369999998665321100 000011 12469999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEE
Q psy1095 139 KVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQ 218 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 218 (325)
.+.+..+.......+.+ ......+|.+...+.......|+.++|.|.+.+++++.+.|.|++++..+......... .
T Consensus 251 ~~~~~~~~~~~~~~v~~--~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~-~ 327 (376)
T 2aty_A 251 RVNSAAFPAPIEKTISK--TKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPI-M 327 (376)
T ss_pred EEecCCCCCceEEEEcC--CCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCce-E
Confidence 99887653222222211 11112356666655554455689999999999976544799999999887433222211 1
Q ss_pred ecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 219 VDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 219 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
..+..+...+.|.|.....+|.|.|+|.|.|...
T Consensus 328 ~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 328 NTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 2222344567788888888889999999998754
No 274
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.73 E-value=1.2e-17 Score=130.96 Aligned_cols=128 Identities=13% Similarity=0.061 Sum_probs=90.7
Q ss_pred CCCCCCcccCCCCCCCcccccccccccc------cccC--CCCeeEecCCc-eEecCCCeEEEEEEEEecC--CCeeEEe
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRT------RRLT--SSPRFYAVPHN-KICDLGDTVRFQCSVTGQP--APWTSWS 100 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~------~~~~--~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~p--~~~v~W~ 100 (325)
...|.|.+++.+|+|.|+|.+.+..... +.+. .+|.+...+.. ..+.+|++++|.|.+.+.| .+.+.|+
T Consensus 63 ~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~ 142 (213)
T 2x1w_L 63 KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 142 (213)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEE
T ss_pred CccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEE
Confidence 3568899999999999999997643221 1121 24555555544 4799999999999999855 3579999
Q ss_pred eCCeeCCCCCc-EEEEe-------cCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCC
Q psy1095 101 KDGKPATPNAR-VTIRE-------KEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 101 ~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
+++..+..... ..... .....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 143 YPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp CSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred ecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 98876543211 10110 1113469999999999999999999999998899999998763
No 275
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.73 E-value=1.3e-17 Score=134.42 Aligned_cols=112 Identities=14% Similarity=0.128 Sum_probs=57.5
Q ss_pred CCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC---CCeeEEeeCC
Q psy1095 128 VTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN---DHDISWFRNN 204 (325)
Q Consensus 128 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~---~~~~~W~~~~ 204 (325)
++..|+|.|+|.+. |.......+.+.. ++.+...+....+.+|+.++|.|.+.+.++. .+.+.|++++
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~------~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 81 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLR------ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQR 81 (254)
T ss_dssp ------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEEC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheee------ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeC
Confidence 68899999999997 3222233333322 3555665667789999999999999887731 2789999843
Q ss_pred --EEec----------cCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 205 --RLIK----------LDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 205 --~~~~----------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
..+. .....+......+ ....|.|.+++.+|+|.|+|.+.|..+
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 137 (254)
T 2c1o_A 82 PGQSPKRLIYLVSKLDSGDPDRFTGSGSG----TDFTLKISRVEAEDLGIYYCVQGSHFP 137 (254)
T ss_dssp TTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred CCCCceEEEEeccccCCCccceEEEecCC----CEEEEEECcCCcccCEEEEEEEEcCcc
Confidence 2110 1101111111111 345899999999999999999998754
No 276
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.73 E-value=7.1e-17 Score=122.49 Aligned_cols=141 Identities=21% Similarity=0.233 Sum_probs=98.5
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.+.+ ..+.|++++..+.... ..|.|.+++.+|+|.
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~-~~~~W~~~~~~~~~~~----------------~~L~i~~~~~~d~G~ 68 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPED-NSTQWFHNESLISSQA----------------SSYFIDAATVNDSGE 68 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTB-CCCEEEETTEEEESSC----------------SEEEESSCCGGGCEE
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCC-cceEEEECCEEccCCc----------------eEEEEeCCCcccCEE
Confidence 45777777777789999999999999888762 3489999998875321 379999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeC------CeecC-----------C-CCc--eEEEEeCC--------EEEEEEcCCCC
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVK------GKDLT-----------S-DGR--LNIITVGG--------TSVLTIEDITG 294 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~------~~~~~-----------~-~~~--~~~~~~~~--------~~~l~i~~v~~ 294 (325)
|+|.+.|..+. ..+.|.|.... ...+. . ... ...+..++ ...|.|.++..
T Consensus 69 Y~C~~~n~~~s--~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~ 146 (175)
T 1fnl_A 69 YRCQTNLSTLS--DPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATL 146 (175)
T ss_dssp EEEECSSSCCC--CCEEEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCG
T ss_pred EEEEeeCCccc--ccEEEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccCh
Confidence 99999885543 34444443111 00000 0 000 11112222 23699999999
Q ss_pred CCCeEEEEEEECCCee-EEeEEEEEEecc
Q psy1095 295 DDSGKYQVHVSNQHGS-DSCYASVAVEGR 322 (325)
Q Consensus 295 ~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~ 322 (325)
+|+|.|+|.|.|..|. .+..+.|.|.++
T Consensus 147 ~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 147 KDSGSYFCRGLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred hhCeEEEEEEEcCCCCccCccEEEEEeCC
Confidence 9999999999997664 556688888764
No 277
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.73 E-value=1.4e-17 Score=126.60 Aligned_cols=142 Identities=22% Similarity=0.227 Sum_probs=98.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.+.+ ..+.|++++..+.... ..|.|.+++.+|+|.|
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~i~W~~~~~~~~~~~----------------~~L~i~~v~~~d~G~Y 66 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEV-SSTKWFHNGSLSEETN----------------SSLNIVNAKFEDSGEY 66 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC-----CCEEEETTEECSCCS----------------SEEEECSCCGGGCEEE
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCc-ceEEEEECCeECCCCc----------------eEEEEeccceecCEEE
Confidence 4677777777789999999999999877652 3699999998876321 3799999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEee------CCeecCCCCce-------------E-EEEeC--------CEEEEEEcCCCCC
Q psy1095 244 TCRVANELGEVVTSACLIVDVV------KGKDLTSDGRL-------------N-IITVG--------GTSVLTIEDITGD 295 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~------~~~~~~~~~~~-------------~-~~~~~--------~~~~l~i~~v~~~ 295 (325)
+|.+.|..+.. .+.|.|... +...+..+..+ . .+..+ ....|.|.++..+
T Consensus 67 ~C~~~~~~~s~--~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~ 144 (176)
T 1f2q_A 67 KCQHQQVNESE--PVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVE 144 (176)
T ss_dssp EEECTTSSCCC--CEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGG
T ss_pred EEEcCCccccc--cEEEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcc
Confidence 99998865543 344444211 11111111100 1 11122 2357999999999
Q ss_pred CCeEEEEEEECCCe-eEEeEEEEEEecccC
Q psy1095 296 DSGKYQVHVSNQHG-SDSCYASVAVEGRKI 324 (325)
Q Consensus 296 d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~ 324 (325)
|+|.|+|.|.|..+ ..+..+.|.|.++|.
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999999755 455568999999885
No 278
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.73 E-value=1.2e-16 Score=126.52 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=89.5
Q ss_pred cCeeEecCCcEEEEEEEEecCCC-CCeeEEeeCCEEe-----------ccC--CCCce-EEEecCCcceeEEEEEeCCCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPN-DHDISWFRNNRLI-----------KLD--SDMKP-EVQVDSKENLVIARLKIPHVY 236 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~~~~~~-----------~~~--~~~~~-~~~~~~~~~~~~~~l~i~~~~ 236 (325)
.++.+.+|++++|.|.+.+.+.+ ...+.|+|++... ... ..+.. ..............|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34678899999999999865542 2479999875321 110 00000 000111112245789999999
Q ss_pred CCCCeEEEEEEEeCCCcEEeEEEEEEEee------------------------------------CCeecCCCCceEEEE
Q psy1095 237 PEDEGEFTCRVANELGEVVTSACLIVDVV------------------------------------KGKDLTSDGRLNIIT 280 (325)
Q Consensus 237 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~------------------------------------~~~~~~~~~~~~~~~ 280 (325)
.+|+|.|+|.|.|..+.....+.+.+... .+..+..........
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~ 171 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVAD 171 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEEC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEEC
Confidence 99999999999998877665444433111 111111100001111
Q ss_pred eCCE-EEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 281 VGGT-SVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 281 ~~~~-~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
.++. ..+.+..+..+|+|.|+|.|.|..|..+.++.|.|.++
T Consensus 172 ~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 172 GVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp TTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred CCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 1221 23455567889999999999999999999999998764
No 279
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.73 E-value=8.5e-17 Score=126.57 Aligned_cols=144 Identities=21% Similarity=0.253 Sum_probs=104.1
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
.+.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... ..|.|.+++.+|+|.|
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~--~~v~W~~~~~~~~~~~~---------------~~L~i~~v~~~d~G~Y 80 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPF--VQYQWFKMNKEIPNGNT---------------SELIFNAVHVKDAGFY 80 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTS--SEEEEEETTEECTTCCS---------------SEEEETTCCGGGCEEE
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCC--CEEEEEECCEECCCCCC---------------CEEEEccCChhhCeEe
Confidence 467777777888999999999999988777 89999999988765421 3799999999999999
Q ss_pred EEEEEeCCCcE-EeEEEEEEEeeCC----------------------eecCCCCce-------------EEEEeC-----
Q psy1095 244 TCRVANELGEV-VTSACLIVDVVKG----------------------KDLTSDGRL-------------NIITVG----- 282 (325)
Q Consensus 244 ~C~~~~~~~~~-~~~~~l~v~~~~~----------------------~~~~~~~~~-------------~~~~~~----- 282 (325)
+|.+.+..+.. ...+.|.|...+. ..+..+... ..+..+
T Consensus 81 ~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~ 160 (218)
T 3k0w_A 81 VCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLT 160 (218)
T ss_dssp EEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECT
T ss_pred EEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECC
Confidence 99999987754 4445666643310 011111111 111222
Q ss_pred --CEEEEEEcCCCCCCCeEEEEEEECCCee-EEeEEEEEEecccC
Q psy1095 283 --GTSVLTIEDITGDDSGKYQVHVSNQHGS-DSCYASVAVEGRKI 324 (325)
Q Consensus 283 --~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~ 324 (325)
....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|.+.+.
T Consensus 161 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~ 205 (218)
T 3k0w_A 161 HETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNN 205 (218)
T ss_dssp TCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC---
T ss_pred CCCCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCcc
Confidence 2247999999999999999999999987 55668898877543
No 280
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.73 E-value=1.6e-17 Score=140.17 Aligned_cols=172 Identities=17% Similarity=0.163 Sum_probs=120.0
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCC
Q psy1095 132 DAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDS 211 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~ 211 (325)
+.|.|+|...+.... +.+ ....+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+....
T Consensus 136 ~~~~~~C~~~~~l~~----l~~------~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~--p~i~W~~~~~~~~~~~ 203 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH----MPN------ASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGL--EQAGWILTELEQSATV 203 (347)
T ss_dssp GGGCCCCSSSSCSSC----CCC------TTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSC--CCCCEEESCCCSSEEE
T ss_pred cccCCCCCCChHHhc----CCc------ccCCCCceeccCCceEEeCCCcEEEEEEEecCCC--CEEEEEcCCceeeccc
Confidence 568899977551110 011 1234577777777788999999999999999887 8899999886543211
Q ss_pred CCceEEEecCCcceeEEEEEeCCCCCCCCe-EEEEEEEeCCCcEEeEEEEEE----------------------------
Q psy1095 212 DMKPEVQVDSKENLVIARLKIPHVYPEDEG-EFTCRVANELGEVVTSACLIV---------------------------- 262 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v---------------------------- 262 (325)
.. ........|.|.+++.+|+| .|+|.|.|..|.....+.|.|
T Consensus 204 ~~--------~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~ 275 (347)
T 2ifg_A 204 MK--------SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPA 275 (347)
T ss_dssp CC--------CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEEEESC
T ss_pred cc--------ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEeeecCC
Confidence 10 01123568999999999999 999999998765544333332
Q ss_pred ----EeeCCeecCCCCceEEEEeC-------CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 263 ----DVVKGKDLTSDGRLNIITVG-------GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 263 ----~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
|.+.+..+..+......... ....|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 276 p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 276 PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp CEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred CcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 23333333322222221111 24569999999999999999999999999999999998877
No 281
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.72 E-value=2e-16 Score=108.82 Aligned_cols=98 Identities=20% Similarity=0.350 Sum_probs=88.2
Q ss_pred ccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 61 RLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 61 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
.+..+|.|...+....+.+|+++.|.|.+.+.|.|.+.|++++..+....++.+........|.|.+++.+|+|.|+|.+
T Consensus 4 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 83 (103)
T 3qp3_A 4 TLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVC 83 (103)
T ss_dssp TTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEE
Confidence 44568899999999999999999999999999999999999999998888888877777788999999999999999999
Q ss_pred EeCCeeEEEEEEEEEECC
Q psy1095 141 ENNYGSVEATARLEIMDP 158 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~ 158 (325)
.|..|.....+.|.|...
T Consensus 84 ~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 84 TNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EeCCCcEEEEEEEEEECC
Confidence 999998888888888653
No 282
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.72 E-value=1.1e-16 Score=109.09 Aligned_cols=94 Identities=19% Similarity=0.328 Sum_probs=78.5
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.|...+....+.+|+.+.|.|.+.|.|. +.+.|++++..+......+......+ ..+.|.|.+++.+|+|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~--p~v~W~k~g~~i~~~~~~~~~~~~~~----~~~~L~I~~~~~~D~G~Y 78 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPT--PEVTWSCGGRKIHSQEQGRFHIENTD----DLTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESC--CEEEEEETTEECCTTGGGTEEEEECS----SEEEEEESSCCGGGCEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecC--CEEEEEECceEeeeeccceeeeeccc----ceEEEEEcCCCccCCEEE
Confidence 466666667788999999999999999998 89999999999876654444433433 356899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|.|..|.....+.|.|.
T Consensus 79 ~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 79 TLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCEEEEEEEEEEE
Confidence 99999999999888888874
No 283
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.72 E-value=9.9e-17 Score=110.75 Aligned_cols=93 Identities=23% Similarity=0.390 Sum_probs=79.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.|...+.+..+.+|+.+.|.|.+.|.|. +.+.|++++..+..+.++... .++ ....|.|.+++.+|+|.|
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~--p~v~W~k~g~~l~~~~~~~~~--~~~----~~~~L~I~~v~~~D~G~Y 84 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPP--PVVVWEKGGQQLAASERLSFP--ADG----AEHGLLLTAALPTDAGVY 84 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESC--CEEEEEETTEECCCCSSEECC--EET----TEEEEEESSCCGGGCEEE
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEecC--CEEEEEECcccccceeeEEEe--ecC----ceEEEEEecCChhhCEEE
Confidence 477777778889999999999999999998 899999999999776654433 333 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEe
Q psy1095 244 TCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~ 264 (325)
+|.|.|..|.....+.|.|..
T Consensus 85 ~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 85 VCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEECCCEEEEEEEEEEEc
Confidence 999999999999888888854
No 284
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.71 E-value=7.2e-17 Score=126.33 Aligned_cols=151 Identities=18% Similarity=0.358 Sum_probs=102.0
Q ss_pred cCeeEecCCcEEEEEEEEecCCC--CCeeEEeeC----------------CEEecc-CC--CCceEEEecCCcceeEEEE
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPN--DHDISWFRN----------------NRLIKL-DS--DMKPEVQVDSKENLVIARL 230 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~--~~~~~W~~~----------------~~~~~~-~~--~~~~~~~~~~~~~~~~~~l 230 (325)
....+.+|+.+.|.|.+.+.+.. .+.+.|+++ +..+.. .. ..+... ...........|
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~~L 86 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHF-TSNDVKSGDASI 86 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEE-SCSCGGGTBCCE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEE-eccCccCCcccE
Confidence 35678899999999999887642 269999983 322221 00 001110 000001123579
Q ss_pred EeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeec-------CC-----------CC----ceEEEEe-C-----
Q psy1095 231 KIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVKGKDL-------TS-----------DG----RLNIITV-G----- 282 (325)
Q Consensus 231 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~-------~~-----------~~----~~~~~~~-~----- 282 (325)
.|.+++.+|+|.|+|.+.+..+.....+.|.|...+.... .. .+ .+..... +
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~ 166 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP 166 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccC
Confidence 9999999999999999999988888888888854432111 00 11 1111111 1
Q ss_pred -------CEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEeccc
Q psy1095 283 -------GTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVEGRK 323 (325)
Q Consensus 283 -------~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 323 (325)
....|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 167 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 167 TPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp GGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred ccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 12489999999999999999999999999999999998665
No 285
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.71 E-value=1.8e-16 Score=128.97 Aligned_cols=161 Identities=16% Similarity=0.159 Sum_probs=106.9
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCe-eEEeeC--CeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPW-TSWSKD--GKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
+.+.|....+.+|+++.|+|.+.. +.|. +.|... ...+... ......+.+.+++.+ |.|.|.+....
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~-------g~~~~~~~l~~v~~~--~~y~C~~~~~~ 71 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLP-------GNNRKVYELSNVQED--SQPMCYSNCPD 71 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCS-------CSSEEEEEEESCCSC--CCCEEEEECSS
T ss_pred eEEeCCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccC-------CCceEEEEEEecccC--CeEEEEEEcCC
Confidence 345677788999999999999864 4444 888631 1111011 111224778887753 46999997654
Q ss_pred eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCC-CeeEEeeCCEEeccCCCCceEEEecCCc
Q psy1095 145 GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPND-HDISWFRNNRLIKLDSDMKPEVQVDSKE 223 (325)
Q Consensus 145 ~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 223 (325)
....+.+.|.|..+|.. +.+.. ....+.+|+.++|.|.+.+..+.. +.+.|+|++..+...... ..
T Consensus 72 ~~~~~~v~l~V~~~P~~---v~I~~--~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~-----~~--- 138 (291)
T 1mq8_A 72 GQSTAKTFLTVYWTPER---VELAP--LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV-----GE--- 138 (291)
T ss_dssp CEEEEECEEEECBCCSC---CCBCC--CCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC-----BT---
T ss_pred ccEEEEEEEEEecCCCC---CEEec--CCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC-----CC---
Confidence 56667778888876432 33322 234478899999999998866532 369999999877533210 01
Q ss_pred ceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 224 NLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 224 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
.....|.+...+.+|.+.|+|.|.+..+
T Consensus 139 -~~~~~l~~~~~~~D~g~~~~C~A~~~l~ 166 (291)
T 1mq8_A 139 -PAEVTTTVLVRRDHHGANFSCRTELDLR 166 (291)
T ss_dssp -TEEEEEECCCSSSCSSCEEEEEEEEECG
T ss_pred -CceEEEEeeeeeccCCceEEEEEEecCC
Confidence 1235688877777778899999998755
No 286
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.71 E-value=3.1e-15 Score=116.41 Aligned_cols=156 Identities=19% Similarity=0.320 Sum_probs=112.0
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEe-cC---CCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTG-QP---APWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~-~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
+.+...|....+..|+.++|.|.+.+ .| ...++|+|++.++... ...|.+..+...|+|.|+|.+.
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa----------T~tLti~s~t~sdSG~YqCvVT 72 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN----------TATLTVADATSENAGSYKVTVQ 72 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEEE
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC----------cceEEeeeccccCCeEEEEEEE
Confidence 46677788888999999999999865 56 3479999999886532 2258899999999999999999
Q ss_pred eCCeeEEEEEEEEEECCCcccCCCeee-ecCcCeeEecCCcEEEEEEE--Eec-CCC---CCeeEEeeCCEEeccCCCCc
Q psy1095 142 NNYGSVEATARLEIMDPRAIISRPKVL-NGLENLRCCDGDSVTFECQV--QVV-PPN---DHDISWFRNNRLIKLDSDMK 214 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~--~~~-~~~---~~~~~W~~~~~~~~~~~~~~ 214 (325)
+..+.......+.|..... +.+. ..+....+..|..+.|.+.+ .|. +++ ..++.|++++..+...
T Consensus 73 Da~Gcs~tSs~VtVT~~a~----l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA---- 144 (304)
T 3shs_A 73 DTDTMTSVESEVFLMEEAE----LIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT---- 144 (304)
T ss_dssp ETTTCCEEECCCEEECBCC----EEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS----
T ss_pred ECCCCeeeeeeEEEeccCc----eeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc----
Confidence 8777554443444443311 1222 22333345567889999887 432 321 2699999999877422
Q ss_pred eEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 215 PEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 215 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
..|.+...+..++|.|.|.+.+..+
T Consensus 145 -------------q~lT~sS~TateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 145 -------------QDITIQEFTADKNGVYTVKVWGESE 169 (304)
T ss_dssp -------------SEEEECSCCGGGCEEEEEEEESSSG
T ss_pred -------------cccceeeEEecCCeEEEEEEEcCCC
Confidence 1577888888999999999999866
No 287
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.70 E-value=5.3e-17 Score=125.75 Aligned_cols=148 Identities=17% Similarity=0.273 Sum_probs=95.6
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+. ..+.+|+.++|.|.+.+.+. .+.|+|++..+.......... . ....|.|.+++.+|+|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~---~~~W~k~g~~~~~~~~~~~~~-~------~~~~L~i~~v~~~D~G~ 72 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ---EYRLYREKKTAPWITRIPQEL-V------KKGQFPIPSITWEHTGR 72 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC---CEEEEESSSCCHHHHTSCHHH-H------TTTEEEESSCCGGGCEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc---EEEEEECCccccccccccccC-C------cccEEEECCCCHHHCeE
Confidence 3567766655 47889999999999987654 699999988764211110000 1 11479999999999999
Q ss_pred EEEEEEeCC-C--cEEeEEEEEEEeeCC-ee--------cCCCCce-----------E-EEE------------------
Q psy1095 243 FTCRVANEL-G--EVVTSACLIVDVVKG-KD--------LTSDGRL-----------N-IIT------------------ 280 (325)
Q Consensus 243 Y~C~~~~~~-~--~~~~~~~l~v~~~~~-~~--------~~~~~~~-----------~-~~~------------------ 280 (325)
|+|.+.|.. + .....+.|.|..... +. +..+..+ . .+.
T Consensus 73 Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~~~ 152 (198)
T 1ugn_A 73 YRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHAR 152 (198)
T ss_dssp EEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCSEEEEEEC------CEEEC-----
T ss_pred EEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCcEEEEEECCCccCCccccccccCC
Confidence 999999976 4 334445565543111 00 0000000 0 000
Q ss_pred eCCEEEEEEcCCCCCCCeEEEEEEECCCee-----EEeEEEEEEec
Q psy1095 281 VGGTSVLTIEDITGDDSGKYQVHVSNQHGS-----DSCYASVAVEG 321 (325)
Q Consensus 281 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~ 321 (325)
......|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.+
T Consensus 153 ~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (198)
T 1ugn_A 153 GSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG 198 (198)
T ss_dssp -CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEEC
T ss_pred CcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEecC
Confidence 012368999999999999999999998762 24567777764
No 288
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.70 E-value=3.5e-16 Score=117.99 Aligned_cols=138 Identities=19% Similarity=0.211 Sum_probs=95.0
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.++. +.+.|++++..+..... .+.|.+++.+|+|.|
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~-~~~~W~~~g~~~~~~~~----------------~~~~~~~~~~d~G~Y 66 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPES-DSIQWFHNGNLIPTHTQ----------------PSYRFKANNNDSGEY 66 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSS-SCEEEEETTEECTTCCS----------------SEEEEECCGGGCEEE
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCc-ceEEEEECCeEcccCcc----------------ceEEEecccccCeEE
Confidence 4566666666778999999999999887632 78999999998865422 356678999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEeeC------CeecCCCCc-------------eE---------EEEeCCEEEEEEcCCCCC
Q psy1095 244 TCRVANELGEVVTSACLIVDVVK------GKDLTSDGR-------------LN---------IITVGGTSVLTIEDITGD 295 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~~------~~~~~~~~~-------------~~---------~~~~~~~~~l~i~~v~~~ 295 (325)
+|.+.+..... .+.|.|...+ ...+..+.. .. +........|.|.++..+
T Consensus 67 ~C~~~~~~~s~--~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~ 144 (170)
T 3ry4_A 67 TCQTGQTSLSD--PVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHS 144 (170)
T ss_dssp EEEETTSBCCC--CEEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGG
T ss_pred EEEEeCCCceE--eEEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEecccc
Confidence 99998754433 3445543211 111111110 00 111223357999999999
Q ss_pred CCeEEEEEEECCCee-EEeEEEEEEe
Q psy1095 296 DSGKYQVHVSNQHGS-DSCYASVAVE 320 (325)
Q Consensus 296 d~G~Y~C~a~n~~g~-~~~~~~l~V~ 320 (325)
|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 145 d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 145 HSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCEEEEEEEEeCcCccccccEEEEEC
Confidence 999999999999997 4555777764
No 289
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.70 E-value=6.3e-16 Score=105.46 Aligned_cols=95 Identities=32% Similarity=0.529 Sum_probs=85.3
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..+|.+...|....+.+|+++.|.|.+.+.|.|.+.|++++..+....++.+...+....|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 35788888898899999999999999999999999999999999888888887777777899999999999999999999
Q ss_pred CCeeEEEEEEEEEEC
Q psy1095 143 NYGSVEATARLEIMD 157 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~ 157 (325)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 84 SAGSVSSSCKLTIKA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEeEEEEEEEEe
Confidence 999888888887753
No 290
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.70 E-value=7.5e-16 Score=105.10 Aligned_cols=94 Identities=23% Similarity=0.377 Sum_probs=82.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEE-ecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIR-EKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+....++... ..++..+|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 4788888888999999999999999999999999999999999877665543 245567899999999999999999999
Q ss_pred CCeeEEEEEEEEEEC
Q psy1095 143 NYGSVEATARLEIMD 157 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~ 157 (325)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999888888888764
No 291
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.69 E-value=3.7e-16 Score=121.37 Aligned_cols=148 Identities=18% Similarity=0.164 Sum_probs=96.6
Q ss_pred cCeeEecCCcEEEEEEEEecCC---CCCeeEEee-CCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEE
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPP---NDHDISWFR-NNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRV 247 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~---~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 247 (325)
....+.+|+.+.|.|.+.+.+. ..+.+.|++ ++.......+.... .+ ........|.|.+++.+|+|.|+|.+
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~--~~-~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLL--EE-QLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEEC--GG-GGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEe--ec-cccCCeeEEEECCCCHHHCcEEEEEE
Confidence 3567889999999999987653 126899999 44333333322211 11 01113468999999999999999999
Q ss_pred EeCCCcEEeEEEEEEEeeCCee------cCCCCceE------------E-------------EE-eCC-EEEEEEcCCCC
Q psy1095 248 ANELGEVVTSACLIVDVVKGKD------LTSDGRLN------------I-------------IT-VGG-TSVLTIEDITG 294 (325)
Q Consensus 248 ~~~~~~~~~~~~l~v~~~~~~~------~~~~~~~~------------~-------------~~-~~~-~~~l~i~~v~~ 294 (325)
.+..+.....+.|.|...+..+ ...+.... + .. .++ ...+.|.++..
T Consensus 87 ~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 166 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKP 166 (202)
T ss_dssp EETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECC
T ss_pred EeCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEc
Confidence 9998877777777775432111 01111110 0 00 111 24567888999
Q ss_pred CCCeEEEEEEECCCeeEEeEEEEEEecc
Q psy1095 295 DDSGKYQVHVSNQHGSDSCYASVAVEGR 322 (325)
Q Consensus 295 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 322 (325)
+|.|.|+|.|.|..|.....+.|.|.++
T Consensus 167 ~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 167 QPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp CTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred CCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 9999999999999999999999888654
No 292
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.69 E-value=4.2e-16 Score=121.55 Aligned_cols=141 Identities=15% Similarity=0.204 Sum_probs=92.0
Q ss_pred cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC---------------C--CCceEEEecCCcceeEEEEEeCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD---------------S--DMKPEVQVDSKENLVIARLKIPH 234 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~l~i~~ 234 (325)
....+.+|+.+.|.|...+.+. +.+.|++++...... . ..+..... ...|.|.+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~--~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~-------~~~L~i~~ 77 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLAL--GAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS-------NGSLLFQM 77 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSC--SEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT-------TSCEEECS
T ss_pred ccceeecCCcEEEEEeCCCCCc--eEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec-------CCeEEEcc
Confidence 3457889999999999766666 899999875422110 0 00111001 13699999
Q ss_pred CCCCCCeEEEEEEEeCC-CcEEeEEEEEEEeeCC------------------------------------eecCCCCceE
Q psy1095 235 VYPEDEGEFTCRVANEL-GEVVTSACLIVDVVKG------------------------------------KDLTSDGRLN 277 (325)
Q Consensus 235 ~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~------------------------------------~~~~~~~~~~ 277 (325)
++.+|+|.|+|.+.+.. +.....+.|.|..... ..+..+.+..
T Consensus 78 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp~i~W~~~g~~l~~~~~~~ 157 (208)
T 3r4d_A 78 ITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMT 157 (208)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTCEEEEEETTEECCCCSSEE
T ss_pred ccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCCceEEEECCEeCCCCCCeE
Confidence 99999999999999985 4555555666643211 1111111111
Q ss_pred EEEeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeE-EEEEEeccc
Q psy1095 278 IITVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCY-ASVAVEGRK 323 (325)
Q Consensus 278 ~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 323 (325)
. ......|.|.++..+|+|.|+|.|.|..|..... ++|.|..+|
T Consensus 158 ~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 158 L--SQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp E--ETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred E--cCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 1 1122579999999999999999999999986654 788887765
No 293
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=4.1e-16 Score=121.53 Aligned_cols=169 Identities=16% Similarity=0.188 Sum_probs=107.2
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeCC----------CCCcEEEEec---CCeEEEEEccCCCCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPAT----------PNARVTIREK---EDLRFLEISEVTLED 132 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~~----------~~~~~~~~~~---~~~~~l~i~~~~~~d 132 (325)
+...|..+.+.+|++++|.|.+.+.+ +.+.|||.. .... ...++.+... .+..+|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 45667778899999999999997644 479999853 1110 1346665544 456789999999999
Q ss_pred CeEEEEEEEeCCe-----------eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEe
Q psy1095 133 AGLYTIKVENNYG-----------SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWF 201 (325)
Q Consensus 133 ~G~Y~C~~~~~~~-----------~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~ 201 (325)
+|.|.|.+.+..+ .......|.|........+|.+.. ..+ .+.|.|.+.+.++..+.+.|+
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~-------~~~-~~~l~C~~~g~~P~~~~v~W~ 154 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFI-------MKN-GTNVACLVKDFYPKEVTISLR 154 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEE-------EEE-TTEEEEEEEEESSSCCEEEEE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEE-------eCC-CCeEEEEEeeEeCCCeEEEEe
Confidence 9999999987531 112335677765322222343322 112 379999999876544799999
Q ss_pred eCCEEeccCCCCceEEEecCCcceeEEEEEeCC-CCCCCCeEEEEEEEeCCCcE
Q psy1095 202 RNNRLIKLDSDMKPEVQVDSKENLVIARLKIPH-VYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~ 254 (325)
++ ..+..... ......++ .+.+.. ...+|.|.|+|.+.|..+..
T Consensus 155 ~~-~~l~~~~~-~~~~~~~g-------~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 155 SS-KKIVEFDP-AIVISPSG-------KYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp CS-SEEEECCC-EEEECTTS-------SEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred cC-CcccCCcc-ceEEcCCC-------cEEEEEeecccCCCcEEEEEEECCccE
Confidence 99 66643321 11111122 122222 23367899999999987543
No 294
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.69 E-value=5.2e-16 Score=107.50 Aligned_cols=98 Identities=24% Similarity=0.459 Sum_probs=86.4
Q ss_pred ccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 61 RLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 61 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
.+..+|.+...|....+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.+++.+|+|.|+|.+
T Consensus 9 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 9 DQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp -CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEE
Confidence 34468899999999999999999999999999999999999999998877877776676778999999999999999999
Q ss_pred EeCCeeEEEEEEEEEECC
Q psy1095 141 ENNYGSVEATARLEIMDP 158 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~ 158 (325)
.|..|.....+.|.|..+
T Consensus 89 ~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 89 RNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EETTEEEEEEEEEEEEC-
T ss_pred EcCCCcEEEEEEEEEEcC
Confidence 999998888888888764
No 295
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.68 E-value=4.9e-18 Score=133.28 Aligned_cols=184 Identities=16% Similarity=0.165 Sum_probs=112.6
Q ss_pred CCee-EecCCceEecCCCeEEEEEEEEecCC---CeeEEeeCCeeCCCCCcE-EE-EecC---CeEEEEEccCCCCCCeE
Q psy1095 65 SPRF-YAVPHNKICDLGDTVRFQCSVTGQPA---PWTSWSKDGKPATPNARV-TI-REKE---DLRFLEISEVTLEDAGL 135 (325)
Q Consensus 65 ~p~~-~~~~~~~~v~~g~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~~~~-~~-~~~~---~~~~l~i~~~~~~d~G~ 135 (325)
+|.+ ...|....+.+|++++|.|.+.+.+. +.|.| + +..+...... .. ...+ ....|.|.+++.+|+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 3444 45577777899999999999988643 68999 4 4333211000 00 0001 23468888888899999
Q ss_pred EEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCc-CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCc
Q psy1095 136 YTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLE-NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMK 214 (325)
Q Consensus 136 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 214 (325)
|+|.+.+..+.......+.+.. ...+|.+..... ...+..|+.+.|.|.+.+++++.+.+.|+++|..+.......
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~~---~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 157 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKSG---NTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLT 157 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECCS---SCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEE
T ss_pred EEEEEecCCCCCceeEeeccCC---CCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceee
Confidence 9999988765322222222111 123455543332 223567889999999999755336999999998876442111
Q ss_pred e-EEEe---cCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy1095 215 P-EVQV---DSKENLVIARLKIPHVYPEDEGEFTCRVANELGE 253 (325)
Q Consensus 215 ~-~~~~---~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 253 (325)
. .... .+..+...+.|.+.....+|.|.|+|.|.|....
T Consensus 158 ~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 158 WASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp CCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred cCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 0 1111 2223344456777665555689999999997643
No 296
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.68 E-value=2.3e-15 Score=139.35 Aligned_cols=221 Identities=16% Similarity=0.218 Sum_probs=142.2
Q ss_pred CCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCC-CCCeEEEEEEEeCCeeEEEEEEEEEEC
Q psy1095 79 LGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTL-EDAGLYTIKVENNYGSVEATARLEIMD 157 (325)
Q Consensus 79 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 157 (325)
.+..+.|.|.+.|.|.|.+.|.++|..+..... ..+.|..+.. ...+.|.|.+.+..|..... .+.+..
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~---------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~ 159 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNR---------AELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLG 159 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCEE---------EEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEES
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCceeE---------EEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeee
Confidence 345899999999999999999999987643221 1245554422 33478888766666543321 122222
Q ss_pred CCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeE-Ee--eCCEEeccCCCCceEEEecCCcceeEEEEEeCC
Q psy1095 158 PRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDIS-WF--RNNRLIKLDSDMKPEVQVDSKENLVIARLKIPH 234 (325)
Q Consensus 158 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 234 (325)
.. ...+|.+. .+....+..|+.+.|.|.+.|.|. +.+. |+ +++..+...... ... .....+.|.|.+
T Consensus 160 ~~-~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~--p~i~~W~~~~~g~~l~~~~~~----~~~--~~~~~~~l~I~~ 229 (731)
T 2v5y_A 160 HP-CTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTV--AGDRLWLQGIDVRDAPLKEIK----VTS--SRRFIASFNVVN 229 (731)
T ss_dssp SC-CSSSCEEC-CCCCEEEETTSCEEEEEEEESCCC--TTCEEEEEESSSCCEEEEEEE----ECC--SSEEEEEEEECS
T ss_pred cc-cccccccc-cccceEEeCCCcEEEEEEeCCCCC--CceeEEEecCCCccccccceE----Eec--cccceEEEEEcc
Confidence 11 12346665 455788999999999999999998 6776 88 677665432110 011 111347899999
Q ss_pred CCCCCCeEEEEEEEeCCCc-EEeEEEEEEEeeCCeecC-------------------CC--Cc---eEE-----------
Q psy1095 235 VYPEDEGEFTCRVANELGE-VVTSACLIVDVVKGKDLT-------------------SD--GR---LNI----------- 278 (325)
Q Consensus 235 ~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~-------------------~~--~~---~~~----------- 278 (325)
+...|.|.|+|.|.|..|. ....+.|.|...+..+.. .+ +. +.+
T Consensus 230 ~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~ 309 (731)
T 2v5y_A 230 TTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWND 309 (731)
T ss_dssp CCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEE
T ss_pred cccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceE
Confidence 9999999999999999997 566666777544332110 00 11 011
Q ss_pred EEeCCEEEEEEcCCCCCCCeEEEEEEE--CCCeeEEeEEEEEE
Q psy1095 279 ITVGGTSVLTIEDITGDDSGKYQVHVS--NQHGSDSCYASVAV 319 (325)
Q Consensus 279 ~~~~~~~~l~i~~v~~~d~G~Y~C~a~--n~~g~~~~~~~l~V 319 (325)
........+.|.++...+.+.|+|.|. |..|....+..+.+
T Consensus 310 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~ 352 (731)
T 2v5y_A 310 RQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRT 352 (731)
T ss_dssp EEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEE
T ss_pred EeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEe
Confidence 111223478899999999999999999 99997664433333
No 297
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.68 E-value=2.4e-16 Score=124.27 Aligned_cols=127 Identities=20% Similarity=0.278 Sum_probs=89.4
Q ss_pred CCCCCCcccCCCCCCCcccccccccccc----cccC---CCCeeEecCCceEecCCCeEEEEEEE-EecCCCeeEEee-C
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRT----RRLT---SSPRFYAVPHNKICDLGDTVRFQCSV-TGQPAPWTSWSK-D 102 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~----~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~~-~ 102 (325)
..+|.|.+++.+|+|.|+|.+.+..... ..+. .+|.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|++ +
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~ 149 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQ 149 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTT
T ss_pred eEEEEECCcccccCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCC
Confidence 4679999999999999999997643222 2222 235555544 3457889999999999 788999999999 4
Q ss_pred CeeCCCCCcEEEEe--cCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCC
Q psy1095 103 GKPATPNARVTIRE--KEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 103 ~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
+..+.......... .+....|.|.+++.+|.|.|+|.+.|..+.....+.|.|..+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 150 GVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp SCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred CccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 55554322222222 1223457899999999999999999999988888888887754
No 298
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.68 E-value=1.9e-15 Score=117.26 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=93.8
Q ss_pred eEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcE
Q psy1095 175 RCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEV 254 (325)
Q Consensus 175 ~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 254 (325)
.+.+|+.+.|.|.+.|.|. +.+.|++..... ... ... ..+ ....|.|.+++.+|+|.|.|.|.|..+..
T Consensus 12 ~~~~G~~v~L~C~~~g~P~--p~i~W~~~~~~~-~~~--~~~--~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 80 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCES--PFFSWRTQIDSP-LNG--KVT--NEG----TTSTLTMNPVSFGNEHSYLCTATCESRKL 80 (202)
T ss_dssp EEETTSCEEEEEEEESCSS--CEEEEEETTCCC-CSS--EEE--EET----TEEEEEESSCCGGGCSEEEEEEEETTEEE
T ss_pred EEcCCCcEEEEEeecCCCC--CeEEEECCCCCC-ccc--eEE--EcC----CccEEEECcCCHHHCEEEEEEEEECCceE
Confidence 3458999999999998887 789999843110 000 111 111 23579999999999999999999998877
Q ss_pred EeEEEEEEEeeCCeec-------CCC---------------CceE-EEEeC--------------------CEEEEEEcC
Q psy1095 255 VTSACLIVDVVKGKDL-------TSD---------------GRLN-IITVG--------------------GTSVLTIED 291 (325)
Q Consensus 255 ~~~~~l~v~~~~~~~~-------~~~---------------~~~~-~~~~~--------------------~~~~l~i~~ 291 (325)
...+.|.|...+.... ..+ .... .+..+ ....|.|..
T Consensus 81 ~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~ 160 (202)
T 1vca_A 81 EKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTP 160 (202)
T ss_dssp EEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECC
T ss_pred eeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEe
Confidence 7777787754332110 000 0000 01111 123467888
Q ss_pred CCCCCCeEEEEEEECCCee-------EEeEEEEEEecccC
Q psy1095 292 ITGDDSGKYQVHVSNQHGS-------DSCYASVAVEGRKI 324 (325)
Q Consensus 292 v~~~d~G~Y~C~a~n~~g~-------~~~~~~l~V~~~p~ 324 (325)
+..+|.|.|+|.|.|..|. .+.++.|.|..+|.
T Consensus 161 ~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 161 VIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 8888999999999999876 56788999999884
No 299
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.67 E-value=1.3e-15 Score=103.82 Aligned_cols=94 Identities=31% Similarity=0.519 Sum_probs=80.4
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC-cEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA-RVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.||.+...|....+.+|+++.|.|.+.+.|.|.+.|++++..+.... ++.....+...+|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 47888888888899999999999999999999999999999887654 34444445556899999999999999999999
Q ss_pred CCeeEEEEEEEEEEC
Q psy1095 143 NYGSVEATARLEIMD 157 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~ 157 (325)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999888888888754
No 300
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.67 E-value=5.4e-17 Score=124.15 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=90.1
Q ss_pred CCCCCCcccCCCCCCCcccccccccccccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCc
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRTRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNAR 111 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~ 111 (325)
..+|.|.+++.+|+|.|+|.+.+..... .+... .+. .+....+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~-~l~V~-~~~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~---- 139 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKEEV-QLLVF-GLT-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI---- 139 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEEEE-EEEEE-EEE-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE----
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCCcE-EEEEE-Eec-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc----
Confidence 4569999999999999999998775421 11110 122 3445578999999999999889999999999875541
Q ss_pred EEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCC
Q psy1095 112 VTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 112 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
. ....|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+
T Consensus 140 ---~---~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 140 ---Q---GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp ---E---ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred ---c---CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 1 12369999999999999999999999888888999988763
No 301
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.67 E-value=9.1e-18 Score=131.05 Aligned_cols=115 Identities=19% Similarity=0.264 Sum_probs=88.5
Q ss_pred CCCCCcccCCCCCCCcccccccccc-------cccccCCCCeeEecCCceEecCCCeEEEEEEE-EecCCCeeEEeeCCe
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI-------RTRRLTSSPRFYAVPHNKICDLGDTVRFQCSV-TGQPAPWTSWSKDGK 104 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~-------~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~~~~~ 104 (325)
.+|.|.+++.+|+|.|+|.+.+..+ ....+..+|.+...+.+..+.+|+.+.|.|.+ .+.|.+.+.|++++.
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~ 147 (209)
T 1nbq_A 68 TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGI 147 (209)
T ss_dssp TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTC
T ss_pred cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCe
Confidence 6788999999999999999987532 12333466666655666678999999999996 889999999999998
Q ss_pred eCCCCCcE-------EEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE
Q psy1095 105 PATPNARV-------TIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV 147 (325)
Q Consensus 105 ~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 147 (325)
.+...... ..........|.|.+++.+|+|.|+|.+.|..|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 148 VMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp CCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred eCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 87654321 01111133569999999999999999999998866
No 302
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.67 E-value=3.5e-17 Score=125.44 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=86.0
Q ss_pred eecccCCCCcccCCCCCCCCCCCCCcc-cCCCCCCCcccccccccccc-----cccC--CCCe----------------e
Q psy1095 13 VKLTRPSGLMSGHSTPRSTPRSTPPRS-ISPLSSRTFTPYSLNSAIRT-----RRLT--SSPR----------------F 68 (325)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~i~~-v~~~d~G~Y~c~~~~~~~~~-----~~~~--~~p~----------------~ 68 (325)
++|.+++..+... ..++|.|.+ ++.+|+|.|+|.+.+..+.. ..+. .+|. +
T Consensus 29 i~W~k~g~~l~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 103 (186)
T 1jbj_A 29 LKWEKNGQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKD 103 (186)
T ss_dssp CEEEETTEEECSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTT
T ss_pred eEEEECCEECCCC-----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCcccc
Confidence 6788877766543 345799999 99999999999998875531 1111 1111 1
Q ss_pred Eec--C--Cc---eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 69 YAV--P--HN---KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 69 ~~~--~--~~---~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
... + .. ..+.+|+++.|.|.+ |.|.++|+|++..+..... ....|.|.+++.+|+|.|+|.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~ 173 (186)
T 1jbj_A 104 GSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGA 173 (186)
T ss_dssp CCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEES
T ss_pred ccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEE
Confidence 000 0 01 124499999999988 7889999999999864322 23459999999999999999999
Q ss_pred eCCeeE
Q psy1095 142 NNYGSV 147 (325)
Q Consensus 142 ~~~~~~ 147 (325)
|..+..
T Consensus 174 N~~g~~ 179 (186)
T 1jbj_A 174 KETSNP 179 (186)
T ss_dssp SCEEEE
T ss_pred cCcCCc
Confidence 987754
No 303
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.66 E-value=1.3e-15 Score=123.56 Aligned_cols=185 Identities=15% Similarity=0.281 Sum_probs=114.9
Q ss_pred CCceEecCCCeEEEEEEEEe--cCCCeeEEeeCC--ee---C---CC-----------CCcEEEEec--CCeEEEEEccC
Q psy1095 72 PHNKICDLGDTVRFQCSVTG--QPAPWTSWSKDG--KP---A---TP-----------NARVTIREK--EDLRFLEISEV 128 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~--~p~~~v~W~~~~--~~---~---~~-----------~~~~~~~~~--~~~~~l~i~~~ 128 (325)
|....+.+|++|+|.|.+.+ .....+.||+.. .. + .. ..++.+..+ ....+|.|.++
T Consensus 30 ~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (267)
T 3u1s_H 30 SGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGL 109 (267)
T ss_dssp CCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSC
T ss_pred eCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 34567899999999999865 345688999742 11 0 00 235555433 24567999999
Q ss_pred CCCCCeEEEEEEEeC------Ce------------e-------EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEE
Q psy1095 129 TLEDAGLYTIKVENN------YG------------S-------VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVT 183 (325)
Q Consensus 129 ~~~d~G~Y~C~~~~~------~~------------~-------~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~ 183 (325)
+.+|+|.|.|.+.+. .+ . ......|.|... ...+|.+........+..|+.+.
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~--~~~~P~v~~~~~~~~~~~g~~~~ 187 (267)
T 3u1s_H 110 TADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSA--STKGPSVFPLAPSSKSTSGGTAA 187 (267)
T ss_dssp CGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCC--CCBCCEEEEECCCGGGEETTEEE
T ss_pred ChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCC--CCCCCEEEEecCCcccCCCCcEE
Confidence 999999999998621 00 0 111235566422 12456665333333346799999
Q ss_pred EEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEE
Q psy1095 184 FECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLI 261 (325)
Q Consensus 184 l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 261 (325)
|.|.+.+..+..+.+.| ++..+.............+..+...+.|.|.....+| |.|+|.+.+..........+.
T Consensus 188 l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 262 (267)
T 3u1s_H 188 LGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 262 (267)
T ss_dssp EEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEcc
Confidence 99999886553478999 4444322111000111222344455789999888888 999999999876655444443
No 304
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=4.7e-16 Score=106.03 Aligned_cols=93 Identities=19% Similarity=0.399 Sum_probs=81.4
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..+|.|...+.+..+.+|+++.|.|.+ .|.+.++|+|+|..+....++.+...+....|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 357788888889999999999999999 788999999999999988888888877778899999999999999999988
Q ss_pred CCeeEEEEEEEEEECCC
Q psy1095 143 NYGSVEATARLEIMDPR 159 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~ 159 (325)
. .....+.|.|..+|
T Consensus 83 ~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGP 97 (100)
T ss_dssp S--CCCEEEEEEEECCS
T ss_pred C--CeeEEEEEEEeCCC
Confidence 7 44567778887653
No 305
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.66 E-value=9.9e-16 Score=103.16 Aligned_cols=89 Identities=20% Similarity=0.361 Sum_probs=75.9
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--eeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+..... .........|.|.+++.+|+|.|+|.+.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELL--VDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSE--EEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEE--EEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 688877788888999999999999999999999999999 87765432 33335567899999999999999999999
Q ss_pred CCeeEEEEEEEEE
Q psy1095 143 NYGSVEATARLEI 155 (325)
Q Consensus 143 ~~~~~~~~~~l~v 155 (325)
..|.....+.|.|
T Consensus 80 ~~G~~~~~~~l~V 92 (93)
T 1wit_A 80 ELGEDEAIFEVIV 92 (93)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9998888877776
No 306
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.66 E-value=4.6e-16 Score=126.28 Aligned_cols=152 Identities=15% Similarity=0.194 Sum_probs=93.8
Q ss_pred eeecCcCeeEecCCcEEEEEEEE---ecCCCCCeeEEeeCCEEeccC--------------CCCceEEEecCCcceeEEE
Q psy1095 167 VLNGLENLRCCDGDSVTFECQVQ---VVPPNDHDISWFRNNRLIKLD--------------SDMKPEVQVDSKENLVIAR 229 (325)
Q Consensus 167 ~~~~~~~~~v~~g~~v~l~C~~~---~~~~~~~~~~W~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~ 229 (325)
+...+....+.+|+.+.|.|.+. +.+. +.+.|++++...... ..+.......+........
T Consensus 8 v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 8 LTVSSPQLRVHVGESVLMGCVVQRTEEKHV--DRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ----CCEEEEETTCCEEECCBCCCSSCCCE--EEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccCCCceEEecCCcEEEEEEeecCCCCce--EEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 33444567788999999999987 4444 789999965422111 0000000011111112257
Q ss_pred EEeCCCCCCCCeEEEEEEEeCCCcE--EeEEEEEEEeeCCe----------ecC--C---C----CceEEEEe-------
Q psy1095 230 LKIPHVYPEDEGEFTCRVANELGEV--VTSACLIVDVVKGK----------DLT--S---D----GRLNIITV------- 281 (325)
Q Consensus 230 l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~----------~~~--~---~----~~~~~~~~------- 281 (325)
|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|....+. .+. . . ..+.....
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~ 165 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEE 165 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSC
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcc
Confidence 9999999999999999999876544 33444444211111 010 0 0 11111110
Q ss_pred --------------------------------CCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 282 --------------------------------GGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 282 --------------------------------~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
.....|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 166 ETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp EEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 124579999999999999999999999999999999994
No 307
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=7.9e-16 Score=118.08 Aligned_cols=147 Identities=16% Similarity=0.164 Sum_probs=94.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+.. .+.+|+.++|.|.+.+ ++ ..+.|+|++..+....... ........|.|.+++.+|+|.|
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~--~~~~w~k~g~~~~~~~~~~-------~~~~~~~~L~I~~v~~~D~G~Y 72 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GA--VEYQLHFEGSLFAVDRPKP-------PERINKVKFYIPDMNSRMAGQY 72 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TC--CEEEEEETTEEEEEECCSS-------CTTCCEEEEEESSCCGGGCEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CC--CEEEEEECCCccccccccc-------CCCcceeEEEeCcCCcccCeEE
Confidence 5677666655 7899999999999864 23 6899999998765211100 0011346899999999999999
Q ss_pred EEEEEeCCCc--EEeEEEEEEEee---------CCeecCCCC-------------ceEEE-----------EeCCEEEEE
Q psy1095 244 TCRVANELGE--VVTSACLIVDVV---------KGKDLTSDG-------------RLNII-----------TVGGTSVLT 288 (325)
Q Consensus 244 ~C~~~~~~~~--~~~~~~l~v~~~---------~~~~~~~~~-------------~~~~~-----------~~~~~~~l~ 288 (325)
+|.+.|..+. ....+.|.|... +...+..+. .+... .......|.
T Consensus 73 ~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~ 152 (188)
T 1oll_A 73 SCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFP 152 (188)
T ss_dssp EEEEEETTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEE
T ss_pred EEEecCCCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCCEEEEEECCccccccccCCCceeEEE
Confidence 9999886432 233445554311 111111111 11111 123346899
Q ss_pred EcCCCCCCCeEEEEEEECCC-e--eEEeEEEEEEec
Q psy1095 289 IEDITGDDSGKYQVHVSNQH-G--SDSCYASVAVEG 321 (325)
Q Consensus 289 i~~v~~~d~G~Y~C~a~n~~-g--~~~~~~~l~V~~ 321 (325)
|.+++.+|+|.|+|.|.|.. . ..+..+.|.|.+
T Consensus 153 I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~g 188 (188)
T 1oll_A 153 LGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 188 (188)
T ss_dssp EEECCGGGCEEEEEECEEETTEECCCCCCEEEEEEC
T ss_pred ECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEecC
Confidence 99999999999999999875 2 234457777764
No 308
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.66 E-value=2.4e-15 Score=102.69 Aligned_cols=93 Identities=33% Similarity=0.614 Sum_probs=80.9
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC--CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP--NARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.||.+...|....+.+|+++.|.|.+.+.|.|.+.|++++..+.. ..++.+.......+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 467777788888899999999999999999999999999998863 457777766667889999999999999999999
Q ss_pred eCCeeEEEEEEEEEE
Q psy1095 142 NNYGSVEATARLEIM 156 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~ 156 (325)
|..|.....+.|.|.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999988888887775
No 309
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-15 Score=104.33 Aligned_cols=95 Identities=31% Similarity=0.483 Sum_probs=80.3
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcE-EEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARV-TIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|...|....+.+|+++.|.|.+.+.|.|.+.|++++..+....+. .....++...|.|.+++..|+|.|+|.+.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 4677878888888999999999999999999999999999988765433 233344556899999999999999999999
Q ss_pred CCeeEEEEEEEEEECC
Q psy1095 143 NYGSVEATARLEIMDP 158 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~ 158 (325)
..|.....+.|.|...
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999888888888753
No 310
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.65 E-value=1.5e-14 Score=108.96 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=109.8
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCe-eEEeeCCeeCCCCCcEEE-EecCCeEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPW-TSWSKDGKPATPNARVTI-REKEDLRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
+.+.|....|.+|+++.|+|.+.. +.|. +.|... + .+... ........|.|.+++. | |.|.|.+.....
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~---l---~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~ 72 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETP---L---PKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDG 72 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECS-SSCSEEEEECS---S---CEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSC
T ss_pred eEEECCCcEEeCCCCEEEEEEccC-CCCccceEEee---C---CCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCC
Confidence 446677788999999999999864 4454 677531 0 01111 1112234588899974 3 999999977656
Q ss_pred eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEeeCCEEeccCCCCceEEEecCCcc
Q psy1095 146 SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWFRNNRLIKLDSDMKPEVQVDSKEN 224 (325)
Q Consensus 146 ~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
...+.+.|.|+.+|. .+...+....+.+|+.++|.|.+.+..|. .+.+.|++++..+...... ...
T Consensus 73 ~~~~~~~l~V~~~P~-----~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~-----~~~--- 139 (185)
T 1iam_A 73 QSTAKTFLTVYWTPE-----RVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAV-----GEP--- 139 (185)
T ss_dssp EEEEECEEEEEBCCS-----EEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC-----TTT---
T ss_pred ceEEEEEEEEeCCCC-----CCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCC-----Ccc---
Confidence 677888999987643 34444445568899999999999986553 2358999999988643210 011
Q ss_pred eeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 225 LVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 225 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
...+|.+...+.+|.+.|+|.|.|..+
T Consensus 140 -~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 140 -AEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp -EEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred -ccEEEEEeceeccCCCeEEEEEEecCc
Confidence 224677776666666699999998776
No 311
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.65 E-value=2.3e-15 Score=101.00 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=76.1
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.|...+.+..+.+|+++.|.|.+.+ +.+.++|+|+|.++....++.+...+....|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 5788889999999999999999999976 457899999999998888888887777789999999999999999999663
Q ss_pred CeeEEEEEEEEEEC
Q psy1095 144 YGSVEATARLEIMD 157 (325)
Q Consensus 144 ~~~~~~~~~l~v~~ 157 (325)
..+..|.|..
T Consensus 83 ----~~sa~L~V~~ 92 (93)
T 1waa_A 83 ----KSAANLKVKE 92 (93)
T ss_dssp ----EEEEEEEEEC
T ss_pred ----cEEEEEEEEc
Confidence 3455666653
No 312
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.65 E-value=5e-16 Score=107.28 Aligned_cols=97 Identities=30% Similarity=0.510 Sum_probs=85.8
Q ss_pred cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEE
Q psy1095 60 RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIK 139 (325)
Q Consensus 60 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 139 (325)
.....+|.|...|....+.+|+++.|.|.+.|.|.|.+.|++++..+....++.+........|.|.+++..|+|.|+|.
T Consensus 9 ~~~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 9 SKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVV 88 (106)
T ss_dssp CCSSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEEC
T ss_pred CCCCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEE
Confidence 34457889999999999999999999999999999999999999998887888877766678899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEE
Q psy1095 140 VENNYGSVEATARLEIM 156 (325)
Q Consensus 140 ~~~~~~~~~~~~~l~v~ 156 (325)
+.|..|.....+.|.|.
T Consensus 89 a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 89 VENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CBCSSCBCCEEEEEEEC
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999887777777764
No 313
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=5.3e-15 Score=104.32 Aligned_cols=96 Identities=21% Similarity=0.430 Sum_probs=80.7
Q ss_pred cCCCCeeEec---CCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEE
Q psy1095 62 LTSSPRFYAV---PHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 62 ~~~~p~~~~~---~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
+..+|.+... +....+.+|+++.|.|.+.|.|.|.+.|++++..+. ..++.+...+....|.|.+++..|+|.|+|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 96 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYEL 96 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEE
Confidence 3356777543 456789999999999999999999999999999987 455666666667789999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECC
Q psy1095 139 KVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~ 158 (325)
.+.|..|.....+.|.|...
T Consensus 97 ~a~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 97 SVQIENMKDTATIRIRVVEK 116 (118)
T ss_dssp EEECSSCEECCEEEEEEECC
T ss_pred EEEeCCCeEEEEEEEEEEcC
Confidence 99999998888888888765
No 314
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.65 E-value=6.2e-15 Score=100.05 Aligned_cols=91 Identities=19% Similarity=0.327 Sum_probs=79.9
Q ss_pred eeEecCCceEecCCCeEEEEEEEEec-CCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQ-PAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
.+...|.+..+.+|+++.|.|.+.+. |.|.+.|++++..+....++.+...++...|.|.+++..|+|.|+|.+.|..|
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 34556778889999999999999997 89999999999999888888876667777899999999999999999999999
Q ss_pred eEEEEEEEEEEC
Q psy1095 146 SVEATARLEIMD 157 (325)
Q Consensus 146 ~~~~~~~l~v~~ 157 (325)
.....+.|.|..
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 888888888764
No 315
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=3.6e-15 Score=104.75 Aligned_cols=100 Identities=24% Similarity=0.457 Sum_probs=85.6
Q ss_pred cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC-CCcEEEEecC-CeEEEEEccCCCCCCeEEE
Q psy1095 60 RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP-NARVTIREKE-DLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 60 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~ 137 (325)
.....+|.|+..|....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ +..+|.|.+++.+|+|.|+
T Consensus 10 ~~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (116)
T 2kkq_A 10 HEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYT 89 (116)
T ss_dssp CCCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEE
T ss_pred cCCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEE
Confidence 3445688999999999999999999999999999999999999998874 4566665543 3458999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEECCC
Q psy1095 138 IKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
|.+.|..|.....+.|.|...+
T Consensus 90 C~a~N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 90 VSAVNEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp EEEEETTEEEEEEEEEEEECCS
T ss_pred EEEEcCCCeEEEEEEEEEeCCC
Confidence 9999999988888899998764
No 316
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.64 E-value=1e-16 Score=123.91 Aligned_cols=132 Identities=11% Similarity=0.087 Sum_probs=81.3
Q ss_pred eeecccCCCCcccCC---CCCCCCCCCCCcccCCCCCCCcccccccccccc-------cccCC---CCeeEecCCceEec
Q psy1095 12 SVKLTRPSGLMSGHS---TPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRT-------RRLTS---SPRFYAVPHNKICD 78 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~---~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-------~~~~~---~p~~~~~~~~~~v~ 78 (325)
.+.|.+++..+.... ........|.|.+++++|+|.|+|.+.+..+.. ..+.. +|.+...|. ..+.
T Consensus 34 ~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~ 112 (196)
T 2d3v_A 34 EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPS-PVVT 112 (196)
T ss_dssp EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC--------
T ss_pred EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCC-cccc
Confidence 567777776553221 112334678899999999999999997653311 22222 566655543 4688
Q ss_pred CCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcE-EEEe-cCCeEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 79 LGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARV-TIRE-KEDLRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 79 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
+|++++|.|.+.+.| +.+.|+|++..+...... .... ......|.|.+++.+|+|.|+|.+.|..+
T Consensus 113 ~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 113 SGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ----CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred CCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 999999999999888 899999999876432111 1111 12236799999999999999999998764
No 317
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.64 E-value=7e-15 Score=108.86 Aligned_cols=101 Identities=30% Similarity=0.388 Sum_probs=87.0
Q ss_pred cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEec-CCeEEEEEccCCCCCCeEEEE
Q psy1095 60 RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREK-EDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 60 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C 138 (325)
..+..+|.|...+....+.+|+++.|.|.+.+.|.|.+.|+|++..+....++.+... .+...|.|.+++..|+|.|+|
T Consensus 36 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 115 (154)
T 1fhg_A 36 EKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTC 115 (154)
T ss_dssp CCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEE
T ss_pred ccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEE
Confidence 4445688999888889999999999999999999999999999999988777776643 345789999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCCc
Q psy1095 139 KVENNYGSVEATARLEIMDPRA 160 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~~ 160 (325)
.+.|..|.....+.|.|...+.
T Consensus 116 ~a~N~~G~~~~~~~l~V~~~p~ 137 (154)
T 1fhg_A 116 KAVNSLGEATCTAELLVETMGK 137 (154)
T ss_dssp EEEETTEEEEEEEEEEEECC--
T ss_pred EEEECCCeEEEEEEEEEeCcCc
Confidence 9999999988888999987643
No 318
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.64 E-value=2.3e-16 Score=124.30 Aligned_cols=126 Identities=7% Similarity=0.049 Sum_probs=84.7
Q ss_pred CCCCCcccCCCCCCCcccccccccccc----cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeC-CeeCC
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIRT----RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKD-GKPAT 107 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~~----~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~-~~~~~ 107 (325)
.+|.|.+++.+|+|.|+|.+.+..... ..+..+|..........+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred EEEEEcCcccccCeEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 378999999999999999998732211 2222333322222222567899999999999999999999998 55554
Q ss_pred CCCcEEEEe--cCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 108 PNARVTIRE--KEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 108 ~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
......... .+......+..+...|.|.|+|.+.|..+.....+.|.|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 212 (222)
T 3sbw_C 160 GKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPEL 212 (222)
T ss_dssp CEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC
T ss_pred CccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCC
Confidence 322221111 111112222345678999999999999998888888887654
No 319
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.64 E-value=9.2e-16 Score=116.33 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=90.3
Q ss_pred eeEecCCcEEEEEEEEe--cCCCCCeeEEeeCCEEeccC--------CCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 174 LRCCDGDSVTFECQVQV--VPPNDHDISWFRNNRLIKLD--------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 174 ~~v~~g~~v~l~C~~~~--~~~~~~~~~W~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+.+.+|+.+.|.|.... .+. +.+.|++++..+..- ...+.....+ ..|.|.+++.+|+|.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~--~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~-------gsL~I~~v~~~D~G~Y 76 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDI--DEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN-------GDLKIKNLTRDDSGTY 76 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTE--EEEEEEETTEEEEEEETTSCCEESSTTEEECTT-------SCEEESSCCGGGCEEE
T ss_pred EEEEcCCcEEEcCCCCCccccc--ccEEEEeCCceeEEEcCCCeecCCCCeEEECCC-------CcEEEcccccccCEEE
Confidence 45678999999994322 223 689999998755310 0111111122 2599999999999999
Q ss_pred EEEEEeCCCcE--EeEEEEEEEeeCCe-ecC-------------CCCceE-EEEeCCEE-----EEEEcCCCCCCCeEEE
Q psy1095 244 TCRVANELGEV--VTSACLIVDVVKGK-DLT-------------SDGRLN-IITVGGTS-----VLTIEDITGDDSGKYQ 301 (325)
Q Consensus 244 ~C~~~~~~~~~--~~~~~l~v~~~~~~-~~~-------------~~~~~~-~~~~~~~~-----~l~i~~v~~~d~G~Y~ 301 (325)
+|.+.|..|.. ...+.|.|...... .+. ...... .+..++.. .+.|..+..+|+|.|+
T Consensus 77 ~C~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~ 156 (176)
T 1hng_A 77 NVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFK 156 (176)
T ss_dssp EEEEEETTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEE
T ss_pred EEEEEeCCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeEEE
Confidence 99999999886 55666776543221 111 011111 22223321 2456678899999999
Q ss_pred EEEECCCeeEEeEEEEEEe
Q psy1095 302 VHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 302 C~a~n~~g~~~~~~~l~V~ 320 (325)
|.|.|..|..+....|.+.
T Consensus 157 C~a~N~~g~~~~~~~l~~~ 175 (176)
T 1hng_A 157 CKAVNRVSQESEMEVVNCP 175 (176)
T ss_dssp EEEEETTEEEEEEECCCCC
T ss_pred EEEEecCCCceecccccCC
Confidence 9999999999998887664
No 320
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.64 E-value=4.6e-16 Score=125.46 Aligned_cols=125 Identities=18% Similarity=0.185 Sum_probs=92.8
Q ss_pred CCCCCcccCCCCCCCcccccccccc----------cccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCC-----ee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI----------RTRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAP-----WT 97 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~----------~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-----~v 97 (325)
.+|.|.+++++|+|.|.|.+.+..+ ..+.+..+|.+...|....+.+|++++|.|.+.+.|.+ .+
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v 158 (256)
T 1nqb_A 79 AYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYL 158 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCE
T ss_pred EEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEE
Confidence 4789999999999999999987632 12334466777777888889999999999999887764 89
Q ss_pred EEee--CCeeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee-EEEEEEEEEEC
Q psy1095 98 SWSK--DGKPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS-VEATARLEIMD 157 (325)
Q Consensus 98 ~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~ 157 (325)
.|+| ++..+. ...++.........+|.|.+++.+|+|.|+|.+.+.... ......|.|..
T Consensus 159 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 159 EWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 9999 554321 134565554556678999999999999999999874332 22334556543
No 321
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.64 E-value=2e-16 Score=124.26 Aligned_cols=129 Identities=15% Similarity=0.090 Sum_probs=90.9
Q ss_pred eeeecccCCCCcccCCC---CCCCCC--CCCCcccCCCCCCCccccccccccc-------ccccC---CCCeeEecCCce
Q psy1095 11 LSVKLTRPSGLMSGHST---PRSTPR--STPPRSISPLSSRTFTPYSLNSAIR-------TRRLT---SSPRFYAVPHNK 75 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~---~~~~~~--~l~i~~v~~~d~G~Y~c~~~~~~~~-------~~~~~---~~p~~~~~~~~~ 75 (325)
....|.+++..+..... ...... +|.|.+++.+|+|.|+|.+.+..+. ...+. .+|.+...| ..
T Consensus 37 ~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~ 115 (218)
T 1uct_A 37 YLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GL 115 (218)
T ss_dssp SEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS-CS
T ss_pred CEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CC
Confidence 35677777665532111 112234 7899999999999999999875321 11221 366776666 45
Q ss_pred EecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 76 ICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 76 ~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
.+.+|++++|.|...+.|.+.+.|+|++..+... . ........|.|.+++.+|+|.|+|.+.+..
T Consensus 116 ~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 116 VLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--H--QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp EECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS--E--EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred ccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc--c--cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 6899999999997666778899999999877542 1 122345679999999999999999998753
No 322
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=116.04 Aligned_cols=127 Identities=19% Similarity=0.161 Sum_probs=85.8
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+.. .+.+|+.++|.|.+.+ +. +.+.|+|++.... ... ..|.|.+++.+|+|.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~--~~~~W~k~g~~~~---------~~~-------~~L~i~~v~~~D~G~ 66 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GV--DLYRLEKLSSSRY---------QDQ-------AVLFIPAMKRSLAGR 66 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TC--SEEEEEETTTCCE---------ESS-------SEEEESSCCGGGCEE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CC--CEEEEEECCcccc---------Ccc-------cEEEECcCChhhCce
Confidence 45677666654 7899999999999876 44 7999999886510 112 489999999999999
Q ss_pred EEEEEEeCCCc--EEeEEEEEEEeeC---------CeecCCCCceE------------EEEeCC------------EEEE
Q psy1095 243 FTCRVANELGE--VVTSACLIVDVVK---------GKDLTSDGRLN------------IITVGG------------TSVL 287 (325)
Q Consensus 243 Y~C~~~~~~~~--~~~~~~l~v~~~~---------~~~~~~~~~~~------------~~~~~~------------~~~l 287 (325)
|+|.+.|..+. ....+.|.|.... ...+..+..+. .+..++ ...|
T Consensus 67 Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L 146 (184)
T 2gi7_A 67 YRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRASF 146 (184)
T ss_dssp EEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCCEEEEEECCCCTTSCCCCEEEEESS
T ss_pred EEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCcEEEEEECCCcCcceecCCCceEEE
Confidence 99999997653 2234555552211 11111111111 111211 3468
Q ss_pred EEcCCCCCCCeEEEEEEECCCe
Q psy1095 288 TIEDITGDDSGKYQVHVSNQHG 309 (325)
Q Consensus 288 ~i~~v~~~d~G~Y~C~a~n~~g 309 (325)
.|.+++.+|+|.|+|.|.|..+
T Consensus 147 ~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 147 PIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SEEEETTCCSEEEEEEEECTTS
T ss_pred EEccCCccCCeEEEEEEEeCCC
Confidence 8999999999999999999864
No 323
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.63 E-value=2.3e-16 Score=127.06 Aligned_cols=125 Identities=16% Similarity=0.187 Sum_probs=90.6
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccC---------------CCCeeEecCCceEecCCCeEEEEEEEEec
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLT---------------SSPRFYAVPHNKICDLGDTVRFQCSVTGQ 92 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~---------------~~p~~~~~~~~~~v~~g~~v~l~C~~~~~ 92 (325)
+|.|++++++|+|.|.|.+.+.... .+.+. .+|.+...|....+.+|++++|.|.+.+.
T Consensus 81 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 160 (253)
T 3uzq_A 81 YLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASEN 160 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSC
T ss_pred EEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCc
Confidence 4899999999999999999873221 12222 25777888888899999999999999887
Q ss_pred CCC----eeEEeeCC--eeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee-EEEEEEE
Q psy1095 93 PAP----WTSWSKDG--KPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS-VEATARL 153 (325)
Q Consensus 93 p~~----~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l 153 (325)
+.+ .+.|+|++ .... ...++.........+|.|.+++.+|+|.|+|.+.|.... ......|
T Consensus 161 ~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l 240 (253)
T 3uzq_A 161 VDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKL 240 (253)
T ss_dssp CEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEE
T ss_pred cccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEE
Confidence 776 89999842 2111 124565555556678999999999999999999875432 2234456
Q ss_pred EEECC
Q psy1095 154 EIMDP 158 (325)
Q Consensus 154 ~v~~~ 158 (325)
.|...
T Consensus 241 ~v~~~ 245 (253)
T 3uzq_A 241 EIKRP 245 (253)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 66554
No 324
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.63 E-value=5.3e-14 Score=117.85 Aligned_cols=176 Identities=19% Similarity=0.267 Sum_probs=112.1
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--------------CCeeEEeeC--Ce--eC---CCC----------CcEEEE---
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQP--------------APWTSWSKD--GK--PA---TPN----------ARVTIR--- 115 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p--------------~~~v~W~~~--~~--~~---~~~----------~~~~~~--- 115 (325)
.++..+.+.+|++++|.|.+...+ ...+.||+. ++ .+ ..+ .+....
T Consensus 163 tq~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~ 242 (401)
T 3f8u_B 163 THTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWD 242 (401)
T ss_dssp ESCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEES
T ss_pred CCCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeec
Confidence 445677899999999999986543 246899963 21 11 010 111111
Q ss_pred ------ecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEECCCcccCCCeeeecCcCee-EecCC-cEEEEEE
Q psy1095 116 ------EKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMDPRAIISRPKVLNGLENLR-CCDGD-SVTFECQ 187 (325)
Q Consensus 116 ------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~-v~~g~-~v~l~C~ 187 (325)
...+..+|.|.+++..|+|.|.|.+.+..+.....+.|.|... |.+...+.... +..|+ .++|.|.
T Consensus 243 ~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~p------P~V~v~p~~~~~~~~G~~~vtL~C~ 316 (401)
T 3f8u_B 243 DDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKP------PKVSLMPATLARAAPGEAPPELLCL 316 (401)
T ss_dssp CCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC------CEEEEESSSCCCCCTTCCCCCEEEE
T ss_pred ccccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccC------CeEeeccCcceeecCCCccEEEEEE
Confidence 0123578999999999999999999988777777788888764 45544433332 34676 7999999
Q ss_pred EEecCCCC-CeeEEe-eCCE---EeccCCCC--ceEEEecCCcceeEEEEEeCCCCCCC-CeEEEEEEEeCC
Q psy1095 188 VQVVPPND-HDISWF-RNNR---LIKLDSDM--KPEVQVDSKENLVIARLKIPHVYPED-EGEFTCRVANEL 251 (325)
Q Consensus 188 ~~~~~~~~-~~~~W~-~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~ 251 (325)
+.++++.+ +.+.|. +++. .+...... .......+..+...+.|.+...+.++ .+.|+|.+.|..
T Consensus 317 a~GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 317 VSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EEEEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred ecCCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 99987653 789995 7652 12111100 00111222344556678887765334 459999999876
No 325
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=3.5e-15 Score=101.74 Aligned_cols=94 Identities=28% Similarity=0.472 Sum_probs=78.6
Q ss_pred ccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEE
Q psy1095 59 TRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 59 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
...+..+|.+...|....+.+|+++.|.|.+.+.|.|.+.|++++..+....... ......|.|.+++.+|+|.|+|
T Consensus 5 ~~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C 81 (99)
T 2yr3_A 5 SSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC---EAGVAELHIQDALPEDHGTYTC 81 (99)
T ss_dssp CSCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEE---ETTEEEEEECSCCTTCCBCEEE
T ss_pred cCCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEe---eCCeEEEEECCCChhhCEEEEE
Confidence 3445578899988999999999999999999999999999999998886554322 2445679999999999999999
Q ss_pred EEEeCCeeEEEEEEEEE
Q psy1095 139 KVENNYGSVEATARLEI 155 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v 155 (325)
.+.|..|.....+.|.|
T Consensus 82 ~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 82 LAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEECSSCEEEEECCEEE
T ss_pred EEEECCCeEEEEEEEEE
Confidence 99999998777776665
No 326
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.8e-15 Score=104.32 Aligned_cols=97 Identities=32% Similarity=0.482 Sum_probs=83.0
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC-CCcEEEEec-CCeEEEEEccCCCCCCeEEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP-NARVTIREK-EDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.+... ++...|.|.+++.+|+|.|+|.+
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 4678888888888999999999999999999999999999998875 456666554 34458999999999999999999
Q ss_pred EeCCeeEEEEEEEEEECCC
Q psy1095 141 ENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~~ 159 (325)
.|..|.....+.|.|...+
T Consensus 86 ~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp ECTTCCEEECCCEEEECCS
T ss_pred EECCCeEEEEEEEEEECCC
Confidence 9999988888888887753
No 327
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.63 E-value=6e-16 Score=124.24 Aligned_cols=121 Identities=16% Similarity=0.149 Sum_probs=87.4
Q ss_pred CCCCCcccCCCCCCCcccccccccccc----------cccCC---CCeeEec-CCceEecCCCeEEEEEEEEecCCCeeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIRT----------RRLTS---SPRFYAV-PHNKICDLGDTVRFQCSVTGQPAPWTS 98 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~~----------~~~~~---~p~~~~~-~~~~~v~~g~~v~l~C~~~~~p~~~v~ 98 (325)
.+|.|.+++++|+|.|+|.+.+..... +.+.. +|.+... +....+.+|+++.|.|.+.+.|.|.+.
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~ 169 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVT 169 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEE
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeE
Confidence 579999999999999999998754421 22222 3444443 445677889999999999999999999
Q ss_pred EeeCCeeCCCCCcEE----------------------EEecCCeEEEEEccCCCCCCeEEEEEEEeC---CeeEEEEEEE
Q psy1095 99 WSKDGKPATPNARVT----------------------IREKEDLRFLEISEVTLEDAGLYTIKVENN---YGSVEATARL 153 (325)
Q Consensus 99 W~~~~~~~~~~~~~~----------------------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~---~~~~~~~~~l 153 (325)
|++++..+....... ... .....|.|.+++.+|+|.|+|.+.|. .+.....+.|
T Consensus 170 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 170 WYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASF-SGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE-ETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred EEeCCCcccccccCcceeEeccCCCCccccCceEeccccc-CCccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 999988775422110 000 01247999999999999999999994 4455555554
Q ss_pred E
Q psy1095 154 E 154 (325)
Q Consensus 154 ~ 154 (325)
.
T Consensus 249 ~ 249 (250)
T 2fbo_J 249 K 249 (250)
T ss_dssp E
T ss_pred e
Confidence 4
No 328
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=3.6e-16 Score=126.19 Aligned_cols=125 Identities=18% Similarity=0.135 Sum_probs=88.8
Q ss_pred CCCCCcccCCCCCCCcccccccccc--------------cccccCCC---------------CeeEecCCceEecCCCeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI--------------RTRRLTSS---------------PRFYAVPHNKICDLGDTV 83 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~--------------~~~~~~~~---------------p~~~~~~~~~~v~~g~~v 83 (325)
.+|.|.+++++|+|.|.|.+.+..+ ..+.+..+ +.+...|....+.+|+++
T Consensus 78 ~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v 157 (257)
T 1f3r_B 78 VFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRV 157 (257)
T ss_dssp EEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCE
T ss_pred EEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCE
Confidence 3789999999999999999977621 11223222 234455667778999999
Q ss_pred EEEEEEEecCCCeeEEee--CCeeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 84 RFQCSVTGQPAPWTSWSK--DGKPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 84 ~l~C~~~~~p~~~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
+|.|.+.+.|.+.+.|+| ++..+. ...++.........+|.|.+++.+|+|.|+|.+.|.......
T Consensus 158 ~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~ 237 (257)
T 1f3r_B 158 TLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGA 237 (257)
T ss_dssp EEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECC
T ss_pred EEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECC
Confidence 999999888888999999 554321 134565544455678999999999999999999986522222
Q ss_pred EEEEEEEC
Q psy1095 150 TARLEIMD 157 (325)
Q Consensus 150 ~~~l~v~~ 157 (325)
...|.|..
T Consensus 238 gt~l~V~~ 245 (257)
T 1f3r_B 238 GTKLELKA 245 (257)
T ss_dssp CCEECCSS
T ss_pred CEEEEEeC
Confidence 33455543
No 329
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.9e-15 Score=105.65 Aligned_cols=94 Identities=27% Similarity=0.431 Sum_probs=80.4
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC-CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP-NARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
..+|.|...|....+.+|+++.|.|.+.|.|.+.+.|++++..+.. ..++.....+ +|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 3578888888889999999999999999999999999999988864 4455554433 69999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCC
Q psy1095 142 NNYGSVEATARLEIMDPR 159 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~ 159 (325)
|..|.....+.|.|...+
T Consensus 83 n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp CSSCEEEEECCEEEECCS
T ss_pred cCCCcEEEEEEEEEEeCC
Confidence 999988888888888763
No 330
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.62 E-value=8.4e-16 Score=122.51 Aligned_cols=112 Identities=16% Similarity=0.151 Sum_probs=82.5
Q ss_pred CCCCCCcccCCCCCCCcccccccccc----------cccccCCCC------------eeEecCCceEecCCCeEEEEEEE
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAI----------RTRRLTSSP------------RFYAVPHNKICDLGDTVRFQCSV 89 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~----------~~~~~~~~p------------~~~~~~~~~~v~~g~~v~l~C~~ 89 (325)
..+|.|++++++|+|.|.|.+.+..+ ..+.+..++ .+...|....+.+|++++|.|.+
T Consensus 72 ~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 151 (238)
T 2p1y_A 72 NFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSY 151 (238)
T ss_dssp BCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEEC
T ss_pred eEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEE
Confidence 34689999999999999999987532 112222222 56677788889999999999999
Q ss_pred EecCCCeeEEeeCCe--e---C---------CCCCcEEEE--ecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 90 TGQPAPWTSWSKDGK--P---A---------TPNARVTIR--EKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 90 ~~~p~~~v~W~~~~~--~---~---------~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+.|.+.+.|+|++. . + ....++.+. ......+|.|.+++.+|+|.|+|.+.|.
T Consensus 152 ~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 152 ENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDT 221 (238)
T ss_dssp CCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEET
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeC
Confidence 998889999999641 1 0 012344443 2334578999999999999999999987
No 331
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.61 E-value=7.3e-17 Score=125.48 Aligned_cols=135 Identities=13% Similarity=0.129 Sum_probs=88.5
Q ss_pred eeecccCCCCcccCCCCCCCCCCCCCcccCCCCCCCcccccccccccccccC----------------------------
Q psy1095 12 SVKLTRPSGLMSGHSTPRSTPRSTPPRSISPLSSRTFTPYSLNSAIRTRRLT---------------------------- 63 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~~~---------------------------- 63 (325)
.++|.+++..+.... ....+|.|.+++.+|+|.|+|.+.+.......+.
T Consensus 31 ~i~W~k~g~~l~~~~---~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (204)
T 1sy6_A 31 NITWFKDGKMIGFLT---EDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDG 107 (204)
T ss_dssp EEEEEETTEEEEEEE---SSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC-------------------------
T ss_pred EEEEEECCEECCCCC---CCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecccccccccccccccccccccccc
Confidence 457887776654321 2346889999999999999999755332111110
Q ss_pred -----CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC--cEEEEecCCeEEEEEccC-CCCCCeE
Q psy1095 64 -----SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA--RVTIREKEDLRFLEISEV-TLEDAGL 135 (325)
Q Consensus 64 -----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~-~~~d~G~ 135 (325)
.++.+...| .....+|++++|.|. +.|.|.++|++++..+.... ...... ...|.|.++ +.+|+|.
T Consensus 108 ~~~~~~~~~~~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~---~~~L~I~~v~~~~D~G~ 181 (204)
T 1sy6_A 108 SDGNEEMGGITQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSD---EDHLSLKEFSELEQSGY 181 (204)
T ss_dssp -----------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEE---TTEEEETTCCHHHHCEE
T ss_pred ccccccccceecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecC---CCEEEEeeCCccccCEE
Confidence 022222222 222338999999999 78889999999998875431 121112 246999999 9999999
Q ss_pred EEEEEEeCCeeE-EEEEEEEE
Q psy1095 136 YTIKVENNYGSV-EATARLEI 155 (325)
Q Consensus 136 Y~C~~~~~~~~~-~~~~~l~v 155 (325)
|+|.+.|..+.. ...+.|.+
T Consensus 182 Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 182 YVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EEEEETTSCGGGSSCEEEEEE
T ss_pred EEEEeccCCCCceeEEEEEEE
Confidence 999999988742 34444443
No 332
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=4e-15 Score=101.64 Aligned_cols=93 Identities=28% Similarity=0.506 Sum_probs=78.2
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCC-CCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATP-NARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
..+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++..... .+|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQ---GTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTT---CCEEEESCCTTTCCEEEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCC---CEEEEccCCcccCEEEEEEEE
Confidence 4688999899999999999999999999999999999999988763 334443322 359999999999999999999
Q ss_pred eCCeeEEEEEEEEEECC
Q psy1095 142 NNYGSVEATARLEIMDP 158 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~ 158 (325)
|..|.....+.|.|..+
T Consensus 83 n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 83 SSSGETSWSAVLDVTES 99 (100)
T ss_dssp CSSCCCBCCEEEEEESC
T ss_pred cCCCCEEEEEEEEEecC
Confidence 99988877888888754
No 333
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=1.1e-14 Score=115.09 Aligned_cols=168 Identities=15% Similarity=0.214 Sum_probs=105.3
Q ss_pred eEecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCC--ee---C---------CCCCcEEEEe--cCCeEEEEEccCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDG--KP---A---------TPNARVTIRE--KEDLRFLEISEVT 129 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~--~~---~---------~~~~~~~~~~--~~~~~~l~i~~~~ 129 (325)
+...|..+.+.+|++++|.|.+.+.+ ...+.||+.. .. + ....++.+.. ..+..+|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 45667788899999999999997544 4679999852 11 1 0134666553 3456789999999
Q ss_pred CCCCeEEEEEEEeCC------e--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEe
Q psy1095 130 LEDAGLYTIKVENNY------G--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWF 201 (325)
Q Consensus 130 ~~d~G~Y~C~~~~~~------~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~ 201 (325)
.+|+|.|.|.+.+.. . .......|.|........+|.+... . ..+.|.|.+.++.+..+.+.|+
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~-------~-~~~~L~C~~~g~~P~~i~v~W~ 155 (229)
T 1hxm_A 84 ERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVM-------K-NGTNVACLVKEFYPKDIRINLV 155 (229)
T ss_dssp GGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEE-------E-ETTEEEEEEESCBSSCCEEEEE
T ss_pred HhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEc-------C-CCCeEEEEEEEEeCCCEEEEEe
Confidence 999999999998652 1 1122346777653222234443321 1 1348999999876543589999
Q ss_pred eCCEEeccCCCCceEEEecCCcceeEEEEEeCC-CCCCCCeEEEEEEEeCCC
Q psy1095 202 RNNRLIKLDSDMKPEVQVDSKENLVIARLKIPH-VYPEDEGEFTCRVANELG 252 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~ 252 (325)
++ ..+..... ......++ .+.+.. ....|.|.|+|.+.+...
T Consensus 156 ~~-~~~~~~~~-~~~~~~dg-------~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 156 SS-KKITEFDP-AIVISPSG-------KYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp CS-SEEEECCC-EEEECTTS-------SEEEEEEEEETTTTTCEEEEEETTE
T ss_pred cC-CEEecCcc-ceEECCCC-------cEEEEECcccCCCCcEEEEEEeCCC
Confidence 99 66653321 11111112 122212 223678899999999764
No 334
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=1.4e-14 Score=101.43 Aligned_cols=98 Identities=24% Similarity=0.281 Sum_probs=80.2
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+....++... ... ....|.|.+++.+|+|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~--p~i~W~k~~~~~~~~~~~~~~--~~~----~~~~L~I~~v~~~D~G~ 77 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQP--ITCTWMKFRKQIQESEHMKVE--NSE----NGSKLTILAARQEHCGC 77 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSS--CEEEEEESSSBCCCSSSEEEE--ECS----SEEEEEETTCCTTTCEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCC--CEEEEEECCEECcCCCCEEEE--EcC----CEEEEEECCCChhcCEE
Confidence 3577777777888999999999999999888 899999999888755443322 222 25689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCCe
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKGK 268 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~~ 268 (325)
|+|.|.|..|.....+.|.|...+..
T Consensus 78 Y~C~a~N~~g~~~~~~~l~V~~~p~~ 103 (114)
T 2cqv_A 78 YTLLVENKLGSRQAQVNLTVVDKPDP 103 (114)
T ss_dssp EEEEEECSSCEEECCEEEEEECSCSC
T ss_pred EEEEEEECCCcEEEEEEEEEECCCCC
Confidence 99999999999999999998765544
No 335
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.61 E-value=6.7e-16 Score=124.56 Aligned_cols=125 Identities=17% Similarity=0.130 Sum_probs=91.5
Q ss_pred CCCCcccCCCCCCCcccccccccc---------cccccCC----------------CCeeEecCCceEecCCCeEEEEEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI---------RTRRLTS----------------SPRFYAVPHNKICDLGDTVRFQCS 88 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~---------~~~~~~~----------------~p~~~~~~~~~~v~~g~~v~l~C~ 88 (325)
+|.|++++++|+|.|.|.+.+... ..+.+.. +|.+...|....+.+|++++|.|.
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 161 (256)
T 3umt_A 82 YLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCR 161 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEE
Confidence 489999999999999999977611 1122222 677888888888999999999999
Q ss_pred EEecCCCeeEEeeCC--eeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEEEE
Q psy1095 89 VTGQPAPWTSWSKDG--KPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV-EATARL 153 (325)
Q Consensus 89 ~~~~p~~~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l 153 (325)
+.+.+.+.+.|+|+. .... ...++.........+|.|.+++.+|+|.|+|.+.+..... .....|
T Consensus 162 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L 241 (256)
T 3umt_A 162 ASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKL 241 (256)
T ss_dssp ESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEE
T ss_pred EecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEE
Confidence 998888899999842 1111 1246666555667789999999999999999998754322 234556
Q ss_pred EEECC
Q psy1095 154 EIMDP 158 (325)
Q Consensus 154 ~v~~~ 158 (325)
.|...
T Consensus 242 ~V~~~ 246 (256)
T 3umt_A 242 EIKRA 246 (256)
T ss_dssp EEC--
T ss_pred EEECC
Confidence 66543
No 336
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=2e-14 Score=97.87 Aligned_cols=93 Identities=23% Similarity=0.357 Sum_probs=76.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+............. ....|.|.+++.+|+|.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~k~g~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y 77 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPD--PECEWYKNGVKIERSDRIYWYWPED-----NVCELVIRDVTGEDSASI 77 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESC--CEEEEEETTEECCCCSSEEEEEEET-----TEEEEEECSCCGGGCEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCC--CEEEEEECCEECCCCCCEEEEEcCC-----CEEEEEECCCCcCCCEEE
Confidence 466666777788999999999999999988 8999999999887655433221122 246899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|.|..|.....+.|.|.
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 78 MVKAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCcEEEEEEEEEe
Confidence 99999999999888888874
No 337
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=1.4e-15 Score=121.94 Aligned_cols=124 Identities=14% Similarity=0.143 Sum_probs=90.3
Q ss_pred CCCCCcccCCCCCCCccccccccccc-------ccccC---------------CCCeeEecCCceEecCCCeEEEEEEEE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR-------TRRLT---------------SSPRFYAVPHNKICDLGDTVRFQCSVT 90 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~-------~~~~~---------------~~p~~~~~~~~~~v~~g~~v~l~C~~~ 90 (325)
.+|.|.+++++|+|.|.|.+.+.... .+.+. .++.+...|....+.+|++++|.|.+.
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 160 (247)
T 2ghw_B 81 LYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRAS 160 (247)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEES
T ss_pred EEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeC
Confidence 36899999999999999999776111 22222 245566677778899999999999999
Q ss_pred ecCCCeeEEee--CCeeC------------CCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEEEEEE
Q psy1095 91 GQPAPWTSWSK--DGKPA------------TPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV-EATARLEI 155 (325)
Q Consensus 91 ~~p~~~v~W~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v 155 (325)
+.|.+.+.|+| ++..+ ....++.........+|.|.+++.+|+|.|+|.+.+..... .....|.|
T Consensus 161 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 161 QSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEE
Confidence 98888999999 55433 11345655555566789999999999999999998754322 22344555
Q ss_pred E
Q psy1095 156 M 156 (325)
Q Consensus 156 ~ 156 (325)
.
T Consensus 241 ~ 241 (247)
T 2ghw_B 241 K 241 (247)
T ss_dssp C
T ss_pred C
Confidence 3
No 338
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.61 E-value=8e-16 Score=120.52 Aligned_cols=124 Identities=12% Similarity=0.041 Sum_probs=88.6
Q ss_pred CCCCCCcccCCCCCCCccccccccccccc------cc-CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCe
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRTR------RL-TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGK 104 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~------~~-~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~ 104 (325)
..+|.|.+++.+|+|.|.|.+.+...... .+ ..++.....+....+..|+.+.+.|.+.+.|.|.++|++++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~ 157 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVK 157 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSC
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCc
Confidence 35789999999999999999865433221 11 133344455556678889999999999999999999999987
Q ss_pred eCCCCCcEEEEec-CCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy1095 105 PATPNARVTIREK-EDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEI 155 (325)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 155 (325)
.+........... .....|.|.++..+|.|.|+|.+.|..+.....+.+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 158 GTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp CEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 6643322211100 11346999999999999999999999886655554444
No 339
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.60 E-value=2.8e-14 Score=132.12 Aligned_cols=285 Identities=16% Similarity=0.181 Sum_probs=169.5
Q ss_pred eeecccCCCCcccCCC----CC---CCCCCCCCcccCCCCCCCcccccccccccccccCCCCeeEecCCceEecCCCeEE
Q psy1095 12 SVKLTRPSGLMSGHST----PR---STPRSTPPRSISPLSSRTFTPYSLNSAIRTRRLTSSPRFYAVPHNKICDLGDTVR 84 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~~----~~---~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~ 84 (325)
.+.|.+++........ .. ....++.++.+...|.|.|.|..... .......+|.+. .+....+.+|+++.
T Consensus 107 ~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~--~~~~~~~~p~~~-~~~~~~v~~G~~v~ 183 (731)
T 2v5y_A 107 NPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKV--LGHPCTRTPHFL-RIQNVEVNAGQFAT 183 (731)
T ss_dssp SEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEE--ESSCCSSSCEEC-CCCCEEEETTSCEE
T ss_pred ceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEe--eecccccccccc-cccceEEeCCCcEE
Confidence 5677777765432111 00 12223456666667777776643321 112334677776 56678899999999
Q ss_pred EEEEEEecCCCeeE-Ee--eCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee-EEEEEEEEEECCCc
Q psy1095 85 FQCSVTGQPAPWTS-WS--KDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS-VEATARLEIMDPRA 160 (325)
Q Consensus 85 l~C~~~~~p~~~v~-W~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~ 160 (325)
|.|.+.|.|.|.+. |+ +++..+.......+.......+|.|.++...|.|.|+|.+.|..|. ......|.|...|.
T Consensus 184 l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~ 263 (731)
T 2v5y_A 184 FQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPV 263 (731)
T ss_dssp EEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCC
T ss_pred EEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCC
Confidence 99999999999887 88 6776654322111111122467999999999999999999999987 66667788887765
Q ss_pred ccCCCeeeecCcCeeEecCCcEEEEEEEEec---CC-CCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCC
Q psy1095 161 IISRPKVLNGLENLRCCDGDSVTFECQVQVV---PP-NDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVY 236 (325)
Q Consensus 161 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~---~~-~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 236 (325)
...+|.+. ......+.|.|..... .+ ....+.|...+.. ........ ...+.|.++.
T Consensus 264 ~~~~p~~~-------~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~------~~~~~~~~------~~~~~i~~L~ 324 (731)
T 2v5y_A 264 PIAPPQLA-------SVGATYLWIQLNANSINGDGPIVAREVEYCTASGS------WNDRQPVD------STSYKIGHLD 324 (731)
T ss_dssp BSSCCEEE-------EECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS------CEEEEECC------SSEEEECSCC
T ss_pred CCCCccee-------ccCCceEEEEeCCcccCCCCccEEEEEEEEECCCC------ceEEeccC------cceEEEeCCC
Confidence 44444432 1234578888865321 11 1125666554211 11111111 1478899999
Q ss_pred CCCCeEEEEEEE--eCCCcEEe----------------------------EEEEEEEeeCCeecCCC--CceEEE-----
Q psy1095 237 PEDEGEFTCRVA--NELGEVVT----------------------------SACLIVDVVKGKDLTSD--GRLNII----- 279 (325)
Q Consensus 237 ~~d~G~Y~C~~~--~~~~~~~~----------------------------~~~l~v~~~~~~~~~~~--~~~~~~----- 279 (325)
..+...|+|.|. |..|.... ++.|.|.. +....... -.+.+.
T Consensus 325 p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~-p~~~~~~~~~~~y~v~y~~~~ 403 (731)
T 2v5y_A 325 PDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP-FGYNVTRCHSYNLTVHYCYQV 403 (731)
T ss_dssp TTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEEC-CCHHHHCSSSCEEEEEEEEES
T ss_pred CCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEEC-CCcccccceeeeEEEEEEEcc
Confidence 988888889998 87775432 12222211 11000000 001110
Q ss_pred -------------EeCCEEEEEEcCCCCCCCeEEEEEEECCCeeEEeEEEEEEe
Q psy1095 280 -------------TVGGTSVLTIEDITGDDSGKYQVHVSNQHGSDSCYASVAVE 320 (325)
Q Consensus 280 -------------~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 320 (325)
.......+.|.++.+.....|+..|.|..|... +..+.++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~ 456 (731)
T 2v5y_A 404 GGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQ 456 (731)
T ss_dssp SSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEE
T ss_pred CCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEE
Confidence 012234678889998888899999999999864 4444443
No 340
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=4e-15 Score=103.53 Aligned_cols=97 Identities=30% Similarity=0.509 Sum_probs=83.3
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEE-ecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIR-EKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
..+|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+......... ..++..+|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 36889999999999999999999999999999999999999988766554433 33445689999999999999999999
Q ss_pred eCCeeEEEEEEEEEECCC
Q psy1095 142 NNYGSVEATARLEIMDPR 159 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~~~~ 159 (325)
|..|.....+.|.|...+
T Consensus 87 n~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKE 104 (110)
T ss_dssp CSSCEEEECCEEEEECCC
T ss_pred CCCCEEEEEEEEEEeCCC
Confidence 999988888889988764
No 341
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.60 E-value=3.4e-15 Score=99.50 Aligned_cols=78 Identities=15% Similarity=0.238 Sum_probs=66.0
Q ss_pred CCeeEecCCceE--ecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 65 SPRFYAVPHNKI--CDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 65 ~p~~~~~~~~~~--v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
||.|..++.+.. +.+|+++.|.|.+.+ |.+.++|+|+|.++..+.++.+...+....|.|.+++.+|+|.|+|.+.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 555655555543 568999999999865 88889999999999988888888888888999999999999999999855
Q ss_pred C
Q psy1095 143 N 143 (325)
Q Consensus 143 ~ 143 (325)
.
T Consensus 83 ~ 83 (91)
T 2lvc_A 83 E 83 (91)
T ss_dssp C
T ss_pred e
Confidence 4
No 342
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.60 E-value=7.2e-15 Score=99.28 Aligned_cols=87 Identities=17% Similarity=0.279 Sum_probs=75.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.||.+...|....+.+|+++.|.|.+.+.| +.+.|++++..+....++.+. ...|.|.+++..|+|.|+|.+.|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEET
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccC
Confidence 567787788888999999999999999987 799999999988877666554 246999999999999999999999
Q ss_pred CeeEEEEEEEEE
Q psy1095 144 YGSVEATARLEI 155 (325)
Q Consensus 144 ~~~~~~~~~l~v 155 (325)
.|.....+.|.|
T Consensus 83 ~g~~~~~~~l~V 94 (95)
T 2ckn_A 83 SGSDTTYFSVNV 94 (95)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 998877777765
No 343
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.60 E-value=1.3e-15 Score=120.70 Aligned_cols=111 Identities=9% Similarity=0.056 Sum_probs=81.8
Q ss_pred CCCCCcccCCCCCCCccccccccc-ccc-----cccC---CCCeeEecCCceEecCCCeE-EEEEEE-EecCCCeeEEee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSA-IRT-----RRLT---SSPRFYAVPHNKICDLGDTV-RFQCSV-TGQPAPWTSWSK 101 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~-~~~-----~~~~---~~p~~~~~~~~~~v~~g~~v-~l~C~~-~~~p~~~v~W~~ 101 (325)
.+|.|.+++.+|+|.|+|.+.+.. ... ..+. ..|.+...+....+.+|+.+ .|.|.+ .+.|.|.+.|++
T Consensus 77 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~ 156 (231)
T 2pet_A 77 GRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR 156 (231)
T ss_dssp CCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE
T ss_pred ceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEE
Confidence 459999999999999999987765 211 1222 23566666666778899988 999999 889999999999
Q ss_pred CCeeCCCCC----cEEEEec-----CC----eEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 102 DGKPATPNA----RVTIREK-----ED----LRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 102 ~~~~~~~~~----~~~~~~~-----~~----~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
++..+.... ++.+... .+ ...|.|.....+|.|.|+|.+.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 157 NGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp TTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 999887654 4333321 11 145777766666799999999983
No 344
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.59 E-value=4.5e-15 Score=97.30 Aligned_cols=81 Identities=17% Similarity=0.307 Sum_probs=68.3
Q ss_pred CCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 72 PHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
...+.+.+|+++.|.|.+.+ |.|.++|+|++.++..+.++.+...+....|.|.+++.+|+|.|+|.+.|. ...+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEE
Confidence 34567889999999999865 888999999999999988998888888889999999999999999998543 3455
Q ss_pred EEEEEC
Q psy1095 152 RLEIMD 157 (325)
Q Consensus 152 ~l~v~~ 157 (325)
.|.|..
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 666643
No 345
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.59 E-value=1.1e-14 Score=114.50 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=87.4
Q ss_pred CeeEecCCcEEEEEEEEecCCCC-CeeEEeeCCEEeccC--C------------CCceEEE---ecCCcceeEEEEEeCC
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPND-HDISWFRNNRLIKLD--S------------DMKPEVQ---VDSKENLVIARLKIPH 234 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~-~~~~W~~~~~~~~~~--~------------~~~~~~~---~~~~~~~~~~~l~i~~ 234 (325)
.+.+..|+.++|.|.+.+.+++. ..+.|+|++..+... . ....... .........+.|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 45678899999999998766521 248999976443210 0 0000000 0001111345799999
Q ss_pred CCCCCCeEEEEEEEeCCCcEEeEE-EEEEEeeCCeec-------C-----------------------CCCceEE-----
Q psy1095 235 VYPEDEGEFTCRVANELGEVVTSA-CLIVDVVKGKDL-------T-----------------------SDGRLNI----- 278 (325)
Q Consensus 235 ~~~~d~G~Y~C~~~~~~~~~~~~~-~l~v~~~~~~~~-------~-----------------------~~~~~~~----- 278 (325)
++.+|+|.|+|.+.+..+...... .+.+...+.... . .++....
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~ 169 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQE 169 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcce
Confidence 999999999999998776544332 222211111000 0 0100000
Q ss_pred -EEeCC----EEEEEEcCCCCCCCeEEEEEEECCCeeEEe--EEEEEEec
Q psy1095 279 -ITVGG----TSVLTIEDITGDDSGKYQVHVSNQHGSDSC--YASVAVEG 321 (325)
Q Consensus 279 -~~~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~ 321 (325)
...++ .+.|.|..+..+|+|.|+|.|.|+.|.... ++.|.|.+
T Consensus 170 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 170 PGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred EEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 00111 236999999999999999999999887544 45555544
No 346
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=2.2e-14 Score=97.86 Aligned_cols=94 Identities=26% Similarity=0.383 Sum_probs=76.0
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+............. ....|.|.+++.+|+|.|
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y 77 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPA--PDVSWYLNGRTVQSDDLHKMIVSEK-----GLHSLIFEVVRASDAGAY 77 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESC--CEEEEEETTEEECCCSSSCEEEETT-----TEEEEEESSCCGGGCEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCC--CEEEEEECCEECcCCCcEEEEEcCC-----CeEEEEECCCCcccCEEE
Confidence 355666666778999999999999999988 8999999999887665443332222 235899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEe
Q psy1095 244 TCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~ 264 (325)
+|.|.|..|.....+.|.|..
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 78 ACVAKNRAGEATFTVQLDVLA 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEEEEEe
Confidence 999999999988888888753
No 347
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.59 E-value=2.3e-15 Score=116.69 Aligned_cols=118 Identities=15% Similarity=0.217 Sum_probs=80.3
Q ss_pred CCCCCCCcccCCCCCCCcccccccccccc----------cccCCC---CeeEecCCceEecCCCeEEEEEEEE-ecCCCe
Q psy1095 31 TPRSTPPRSISPLSSRTFTPYSLNSAIRT----------RRLTSS---PRFYAVPHNKICDLGDTVRFQCSVT-GQPAPW 96 (325)
Q Consensus 31 ~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~----------~~~~~~---p~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~ 96 (325)
...+|.|.+++++|+|.|+|.+.+..+.. +.+..+ |.+.... ...|+.+.|.|.+. +.|.|.
T Consensus 63 ~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~----~~~g~~~~l~C~~~~g~P~p~ 138 (201)
T 1dr9_A 63 NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE----IPTSNIRRIICSTSGGFPEPH 138 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEE----CSSTTEEEEEEEEEEESSCEE
T ss_pred CCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEecc----CCCCCeEEEEEecCCccCCCE
Confidence 34679999999999999999998743221 112222 3333221 24588999999995 899999
Q ss_pred eEEeeCCeeCCCCCcEEEEecC-CeEEE-EEccCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy1095 97 TSWSKDGKPATPNARVTIREKE-DLRFL-EISEVTLEDAGLYTIKVENNYGSVEATAR 152 (325)
Q Consensus 97 v~W~~~~~~~~~~~~~~~~~~~-~~~~l-~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 152 (325)
++|++++..+............ +...+ .+..+...|.|.|+|.+.|..+...+.+.
T Consensus 139 i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 139 LSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred EEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 9999999888754332222222 32222 33455678999999999999887665544
No 348
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.59 E-value=1.1e-14 Score=116.14 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=95.7
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+.. .+.+|+.|+|.|.+.+ +. ..+.|+|++..+....... ........|.|.+++.+|+|.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~--~~~~w~k~g~~~~~~~~~~-------~~~~~~~~L~I~~v~~~DsG~ 74 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GA--VEYQLHFEGSLFAVDRPKP-------PERINKVKFYIPDMNSRMAGQ 74 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TC--CEEEEEETTEEEEEECCSS-------CTTCCEEEEEECSCCGGGCEE
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CC--cEEEEEECCCccccccccc-------cCCcceeEEEecCCCcccCeE
Confidence 45777766655 7899999999999853 23 6899999998764211000 001134689999999999999
Q ss_pred EEEEEEeCCCc--EEeEEEEEEEee---------CCeecCCCCce-------------EE-----------EEeCCEEEE
Q psy1095 243 FTCRVANELGE--VVTSACLIVDVV---------KGKDLTSDGRL-------------NI-----------ITVGGTSVL 287 (325)
Q Consensus 243 Y~C~~~~~~~~--~~~~~~l~v~~~---------~~~~~~~~~~~-------------~~-----------~~~~~~~~l 287 (325)
|+|.+.+..+. .+..+.|.|... +...+..+..+ .. ........|
T Consensus 75 Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l 154 (242)
T 1p6f_A 75 YSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEF 154 (242)
T ss_dssp EEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEE
T ss_pred EEEEEecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEE
Confidence 99999875432 233445555321 11111111111 11 112334679
Q ss_pred EEcCCCCCCCeEEEEEEECCC---eeEEeEEEEEEecc
Q psy1095 288 TIEDITGDDSGKYQVHVSNQH---GSDSCYASVAVEGR 322 (325)
Q Consensus 288 ~i~~v~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~~~ 322 (325)
.|.+++.+|+|.|+|.|.|.. ...+..+.|.|.+.
T Consensus 155 ~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 155 PLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp EEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred EeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 999999999999999999864 23445688888864
No 349
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=6.5e-15 Score=106.28 Aligned_cols=85 Identities=25% Similarity=0.513 Sum_probs=72.5
Q ss_pred CCceEecCCCeEEEEEEEEecCCCeeEEeeCC----------------------------eeC-CCCCcEEEEecCCeEE
Q psy1095 72 PHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG----------------------------KPA-TPNARVTIREKEDLRF 122 (325)
Q Consensus 72 ~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~~ 122 (325)
|..+.+.+|+++.|.|.+.|.|.|.++|+|++ ..+ ....++.+...+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 56778999999999999999999999999988 444 2345666666666678
Q ss_pred EEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEE
Q psy1095 123 LEISEVTLEDAGLYTIKVENNYGSVEATARLEIM 156 (325)
Q Consensus 123 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 156 (325)
|.|.+++..|+|.|+|.+.|..|.....+.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999988888888774
No 350
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.59 E-value=4.3e-16 Score=121.99 Aligned_cols=119 Identities=14% Similarity=0.234 Sum_probs=86.5
Q ss_pred CCCCCcccCCCCCCCcccccccccc--------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CC-CeeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI--------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA-PWTS 98 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~v~ 98 (325)
.+|.|.+++++|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |. +.+.
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 149 (213)
T 3mj8_L 70 ATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVT 149 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEE
Confidence 4588999999999999999987654 112222 57777777766666689999999999885 44 4999
Q ss_pred EeeCCeeCCCCCcE--EEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 99 WSKDGKPATPNARV--TIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 99 W~~~~~~~~~~~~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
|++++..+...... .....+ ....|.|.++..+|.|.|+|.+.|..+.....+
T Consensus 150 W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 150 WEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred EEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 99999988643110 001111 123488999999999999999999887655443
No 351
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=99.82 Aligned_cols=92 Identities=22% Similarity=0.372 Sum_probs=79.7
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..||.+...+....+.+|+++.|.|.+.+ |.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 46788888888999999999999999987 77889999999999888888888777778899999999999999999987
Q ss_pred CCeeEEEEEEEEEECCC
Q psy1095 143 NYGSVEATARLEIMDPR 159 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~ 159 (325)
....+.|.|...+
T Consensus 85 ----~~~~~~l~V~~~p 97 (103)
T 2edf_A 85 ----SKSTASLHVEEKA 97 (103)
T ss_dssp ----CEEEEEEEECCCS
T ss_pred ----CCcEEEEEEeCCC
Confidence 3556777887653
No 352
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.58 E-value=2.8e-15 Score=120.86 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=84.9
Q ss_pred CCCCcccCCCCCCCcccccccc------------c---c--cccccCC---------------CCeeEecCCceEecCCC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNS------------A---I--RTRRLTS---------------SPRFYAVPHNKICDLGD 81 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~------------~---~--~~~~~~~---------------~p~~~~~~~~~~v~~g~ 81 (325)
+|.|++++++|+|.|.|.+.+. . . ..+.+.. +|.+...|....+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 5899999999999999999875 0 1 1122222 56777888888999999
Q ss_pred eEEEEEEEEecCC-CeeEEeeC--CeeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 82 TVRFQCSVTGQPA-PWTSWSKD--GKPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 82 ~v~l~C~~~~~p~-~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
+++|.|.+.+.+. +.+.|+|. +.... ...++.........+|.|.+++.+|+|.|+|.+.+..
T Consensus 166 ~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 166 RATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp CEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 9999999988775 89999983 22211 2346666555667789999999999999999998754
No 353
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.58 E-value=1.7e-15 Score=122.18 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=88.6
Q ss_pred CCCCcccCCCCCCCccccccccc-------c--cccccCC--------------CCeeEecCCceEecCCCeEEEEEEEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSA-------I--RTRRLTS--------------SPRFYAVPHNKICDLGDTVRFQCSVT 90 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~-------~--~~~~~~~--------------~p~~~~~~~~~~v~~g~~v~l~C~~~ 90 (325)
+|.|.+++++|+|.|.|.+.+.. . ..+.+.. +|.+...|....+.+|++++|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~ 166 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSAS 166 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEES
T ss_pred EEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEc
Confidence 68999999999999999997751 1 1122222 36677777788899999999999998
Q ss_pred ecCCC-eeEEeeC--CeeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeE-EEEEEEE
Q psy1095 91 GQPAP-WTSWSKD--GKPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSV-EATARLE 154 (325)
Q Consensus 91 ~~p~~-~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~ 154 (325)
+.+.+ .+.|+|+ +.... ...++.........+|.|.+++.+|+|.|+|.+.+..... .....|.
T Consensus 167 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~ 246 (257)
T 3gkz_A 167 SSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLE 246 (257)
T ss_dssp SCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEE
T ss_pred cCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEE
Confidence 87777 8999984 22211 1245555555566789999999999999999997643321 2234455
Q ss_pred EEC
Q psy1095 155 IMD 157 (325)
Q Consensus 155 v~~ 157 (325)
|..
T Consensus 247 v~~ 249 (257)
T 3gkz_A 247 IKR 249 (257)
T ss_dssp ECC
T ss_pred EEe
Confidence 544
No 354
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.58 E-value=6.2e-15 Score=102.21 Aligned_cols=96 Identities=24% Similarity=0.440 Sum_probs=71.6
Q ss_pred ccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 61 RLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 61 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
.+..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+....+...... ...|.|.+++.+|+|.|+|.+
T Consensus 6 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a 83 (108)
T 3kvq_A 6 LERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDG--NRNLTIRRVRKEDEGLYTCQA 83 (108)
T ss_dssp -----CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETT--TTEEEECSCCGGGCEEEEEEE
T ss_pred CccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCC--CcEEEEeecCcccCEEEEEEE
Confidence 344688888888889999999999999999999999999999998877666555432 357999999999999999999
Q ss_pred EeCCeeEEEEEEEEEECC
Q psy1095 141 ENNYGSVEATARLEIMDP 158 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~ 158 (325)
.|..|.....+.|.|...
T Consensus 84 ~n~~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 84 CSVLGCAKVEAFFIIEGA 101 (108)
T ss_dssp C----CEEEEEEEEEEC-
T ss_pred EeCCCceEEEEEEEEeCC
Confidence 999998888888888875
No 355
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.58 E-value=3.4e-14 Score=99.66 Aligned_cols=82 Identities=24% Similarity=0.280 Sum_probs=69.5
Q ss_pred CCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecC-------CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 79 LGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKE-------DLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 79 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
.+..+.|.|.+.|.|.|.|+|+|+|.++....+....... ....|.|.+++..|+|.|+|.|.|..|...+.+
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 6788999999999999999999999999877665433211 246799999999999999999999999998888
Q ss_pred EEEEECCCc
Q psy1095 152 RLEIMDPRA 160 (325)
Q Consensus 152 ~l~v~~~~~ 160 (325)
.|.|...|.
T Consensus 94 ~l~v~~~P~ 102 (126)
T 1he7_A 94 MAAFMDNPF 102 (126)
T ss_dssp EECCCSCTT
T ss_pred EEEEEcCCC
Confidence 888887654
No 356
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.58 E-value=3.6e-14 Score=97.40 Aligned_cols=92 Identities=23% Similarity=0.340 Sum_probs=76.5
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+......... ..+ ....|.|.+++.+|+|.|
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~i~W~k~~~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y 79 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPT--AEVKWYHNGVELQESSKIHYT--NTS----GVLTLEILDCHTDDSGTY 79 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESC--CEEEEEETTEECCCCSSEEEE--EET----TEEEEEECSCCGGGCEEE
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCC--CEEEEEECCEECCCCCCEEEE--ECC----CEEEEEEcCCCcccCEEE
Confidence 466666777788999999999999999998 899999999988766543332 222 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|.|..|.....+.|.|.
T Consensus 80 ~C~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 80 RAVCTNYKGEASDYATLDVT 99 (103)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEEEEEEEEEE
Confidence 99999999999888888874
No 357
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.58 E-value=3.5e-14 Score=96.85 Aligned_cols=90 Identities=22% Similarity=0.368 Sum_probs=77.6
Q ss_pred CCCeeEecCCc-eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHN-KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|...+.+ ..+.+|+++.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 57888888776 5788999999999998 6889999999999998888888887777788999999999999999999
Q ss_pred CCeeEEEEEEEEEECC
Q psy1095 143 NYGSVEATARLEIMDP 158 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~ 158 (325)
+.....+.|.|..+
T Consensus 83 --g~~~~~~~l~V~~~ 96 (100)
T 2yuv_A 83 --GDEKCSTELFVRSG 96 (100)
T ss_dssp --TTEEEEEEEEECCS
T ss_pred --CCceEEEEEEEecC
Confidence 44566777888765
No 358
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.57 E-value=3.1e-14 Score=99.90 Aligned_cols=101 Identities=27% Similarity=0.468 Sum_probs=79.5
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.|...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... +......+. ....|.|.+++.+|+|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~--p~v~W~k~~~~~~~~~~-~~~~~~~~~---~~~~L~I~~v~~~D~G~ 87 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPP--PKLFWKRNNEMVQFNTD-RISLYQDNT---GRVTLLIKDVNKKDAGW 87 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSC--CEEEEEETTEECCCCBT-TEEEEECTT---CEEEEEEEEECGGGCEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCC--CEEEEEECCEECcCCCC-eEEEEeCCC---CeEEEEECCCCcccCEE
Confidence 4577777788889999999999999999888 89999999988865322 111112210 24589999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCCee
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKGKD 269 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~~~ 269 (325)
|+|.|.|..|.....+.|.|...+...
T Consensus 88 Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 88 YTVSAVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCSCCC
T ss_pred EEEEEEcCCCeEEEEEEEEEeCCCCCC
Confidence 999999999999888899887665543
No 359
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.57 E-value=5.5e-14 Score=95.69 Aligned_cols=93 Identities=27% Similarity=0.396 Sum_probs=74.3
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+...... ......+ ....|.|.+++.+|+|.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~k~~~~~~~~~~~-~~~~~~~----~~~~L~i~~~~~~D~G~Y 77 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPK--PVVSWLRNRQPVRPDQRR-FAEEAEG----GLCRLRILAAERGDAGFY 77 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESC--CEEEEEETTEECCCBTTE-EEEECGG----GEEEEEESSCCGGGCEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCC--CEEEEEECCEECCCCCCE-EEEECCC----CEEEEEEccCCcCCCEEE
Confidence 356666666778999999999999999998 899999999988654332 2211222 345899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|.|..|.....+.|.|.
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 78 TCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCceeEEEEEEEE
Confidence 99999999998888888774
No 360
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.57 E-value=4.8e-15 Score=116.72 Aligned_cols=121 Identities=16% Similarity=0.066 Sum_probs=84.6
Q ss_pred CCCCCCCcccCCCCCCCccccccccc-c-----cccccCCCCeeEecCCceEecCCCeE-EEEEEEE-ecCCCeeEEeeC
Q psy1095 31 TPRSTPPRSISPLSSRTFTPYSLNSA-I-----RTRRLTSSPRFYAVPHNKICDLGDTV-RFQCSVT-GQPAPWTSWSKD 102 (325)
Q Consensus 31 ~~~~l~i~~v~~~d~G~Y~c~~~~~~-~-----~~~~~~~~p~~~~~~~~~~v~~g~~v-~l~C~~~-~~p~~~v~W~~~ 102 (325)
...+|.|.+++.+|+|.|+|.+.+.. . ..+.+..+|.+...+.... .+|+.+ .|.|.+. +.|.|.++|+++
T Consensus 76 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~ 154 (221)
T 3eow_R 76 RDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSD 154 (221)
T ss_dssp CCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECS
T ss_pred CCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeC
Confidence 35679999999999999999987644 1 1234456888765554433 678888 4999987 789999999987
Q ss_pred CeeCCCCCcEEEEec---CCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy1095 103 GKPATPNARVTIREK---EDLRFLEISEVTLEDAGLYTIKVENNYGSVEATAR 152 (325)
Q Consensus 103 ~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 152 (325)
+.............. .....|.|.++..+|.|.|+|.+.|..+.....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~ 207 (221)
T 3eow_R 155 LGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLT 207 (221)
T ss_dssp SSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEE
T ss_pred CCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEE
Confidence 544332111100011 12356999999999999999999998765444433
No 361
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.7e-14 Score=98.01 Aligned_cols=89 Identities=21% Similarity=0.321 Sum_probs=75.0
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC--cEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA--RVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
|+.|...+.+..+.+|++++|.|.+.+ |.+.+.|+|++..+.... ++.+...+....|.|.+++.+|+|.|+|.+.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 445777788889999999999999977 668999999999998777 66777777778899999999999999999976
Q ss_pred CCeeEEEEEEEEEECC
Q psy1095 143 NYGSVEATARLEIMDP 158 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~ 158 (325)
....+.|.|...
T Consensus 86 ----~~~~~~l~V~~~ 97 (103)
T 1x44_A 86 ----GQSSAKLSVDLK 97 (103)
T ss_dssp ----EEEEEEEEEECC
T ss_pred ----CcEEEEEEEeCC
Confidence 455677777765
No 362
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.56 E-value=1.3e-13 Score=111.01 Aligned_cols=81 Identities=14% Similarity=0.203 Sum_probs=55.4
Q ss_pred eeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC--EE---ec----------cCCCCceEEEecCCcceeEEEE
Q psy1095 166 KVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN--RL---IK----------LDSDMKPEVQVDSKENLVIARL 230 (325)
Q Consensus 166 ~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~--~~---~~----------~~~~~~~~~~~~~~~~~~~~~l 230 (325)
.+...+....+.+|+.++|.|.+.+.+. +.+.|++.. .. +. ...++....... .....|
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~--~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~sL 78 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSAT--PYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKS----DSSFHL 78 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSC--CEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETT----TTEEEE
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCC--ceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCC----CCEEEE
Confidence 4445555678899999999999998876 899999832 11 10 011111110111 135689
Q ss_pred EeCCCCCCCCeEEEEEEEeCCC
Q psy1095 231 KIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 231 ~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
.|.+++.+|+|.|.|.+.+..+
T Consensus 79 ~I~~v~~~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 79 RKASVHRSDSAVYFCAVSAKGT 100 (256)
T ss_dssp EESSCCGGGCSEEEEEEECTTC
T ss_pred EECCCCcccCEEEEEEEecCCC
Confidence 9999999999999999998754
No 363
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=99.84 Aligned_cols=92 Identities=17% Similarity=0.257 Sum_probs=77.6
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCC-CeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPA-PWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+|.|...+.+..+.+|++++|.|.+.+.|. +.+.|+|++..+....++.+...+...+|.|.+++.+|+|.|+|.+.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 4567778888899999999999999988764 479999999999888888887777778999999999999999998843
Q ss_pred CCeeEEEEEEEEEECCC
Q psy1095 143 NYGSVEATARLEIMDPR 159 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~ 159 (325)
....+.|.|..+|
T Consensus 87 ----~~~~a~L~V~~~p 99 (104)
T 2eny_A 87 ----LTSKASLIVRERS 99 (104)
T ss_dssp ----EEEEECEEEECCC
T ss_pred ----eeEEEEEEEeCCC
Confidence 4567778887754
No 364
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=6.5e-15 Score=120.48 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=90.1
Q ss_pred CCCCCcccCCCCCCCcccccccccc---c-------ccccCC---------------CCeeEecCCceEecCCCeEEEEE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI---R-------TRRLTS---------------SPRFYAVPHNKICDLGDTVRFQC 87 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~---~-------~~~~~~---------------~p~~~~~~~~~~v~~g~~v~l~C 87 (325)
.+|.|.+++++|+|.|.|.+.+..+ . ...+.. ++.+...|....+.+|++++|.|
T Consensus 105 ~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C 184 (282)
T 1qok_A 105 AYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITC 184 (282)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEE
T ss_pred EEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEE
Confidence 4689999999999999999977642 0 122222 34566677778899999999999
Q ss_pred EEEecCCCeeEEee--CCeeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCe-eEEEEEE
Q psy1095 88 SVTGQPAPWTSWSK--DGKPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYG-SVEATAR 152 (325)
Q Consensus 88 ~~~~~p~~~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~ 152 (325)
.+.+.+ +.+.|+| ++..+. ...++.........+|.|.+++.+|+|.|+|.+.+... .......
T Consensus 185 ~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~ 263 (282)
T 1qok_A 185 SASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTK 263 (282)
T ss_dssp EESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred EecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEE
Confidence 999888 8999999 554331 13466655455667899999999999999999986432 2223445
Q ss_pred EEEEC
Q psy1095 153 LEIMD 157 (325)
Q Consensus 153 l~v~~ 157 (325)
|.|..
T Consensus 264 l~V~~ 268 (282)
T 1qok_A 264 LELKR 268 (282)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 55543
No 365
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.56 E-value=7.9e-14 Score=94.90 Aligned_cols=92 Identities=23% Similarity=0.377 Sum_probs=75.7
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+....++... ..+ ....|.|.+++.+|+|.|
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~d~G~Y 77 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPR--PTAIWTKDGKAITQGGKYKLS--EDK----GGFFLEIHKTDTSDSGLY 77 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESC--CEEEEEETTEECCSSSSEEEE--EET----TEEEEEECSCCGGGCEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCC--CEEEEEECCEECcCCCCEEEE--EeC----CEEEEEECCCCcccCEEE
Confidence 456666667788999999999999999988 899999999988765544332 222 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|.|..|.....+.|.|.
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 78 TCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEeEEEEEEEE
Confidence 99999999998888888774
No 366
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.55 E-value=3.8e-14 Score=95.67 Aligned_cols=88 Identities=17% Similarity=0.329 Sum_probs=74.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
..|.|...|....+.+|+++.|.|.+ +.|.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 7 PVSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CCCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 45677777888899999999999999 78888999999999998777888877777788999999999999999999
Q ss_pred CeeEEEEEEEEEE
Q psy1095 144 YGSVEATARLEIM 156 (325)
Q Consensus 144 ~~~~~~~~~l~v~ 156 (325)
+.....+.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 334455666654
No 367
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=1.1e-14 Score=102.28 Aligned_cols=92 Identities=17% Similarity=0.230 Sum_probs=73.3
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEec---CCCeeEEeeCCeeC---CCCCcEEEEec--C----CeEEEEEccCCCCCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQ---PAPWTSWSKDGKPA---TPNARVTIREK--E----DLRFLEISEVTLEDA 133 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~---p~~~v~W~~~~~~~---~~~~~~~~~~~--~----~~~~l~i~~~~~~d~ 133 (325)
|.|+..|.+..+.+|++++|.|.+.+. |.|.|.|||+.... ....++.+... . ....|.|.+++..|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 567788889999999999999999874 89999999964211 11334444321 1 146799999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEEC
Q psy1095 134 GLYTIKVENNYGSVEATARLEIMD 157 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~~~~l~v~~ 157 (325)
|.|+|++.|..+...+.+.|.|..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999988
No 368
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.55 E-value=1.6e-15 Score=118.62 Aligned_cols=119 Identities=13% Similarity=0.200 Sum_probs=86.1
Q ss_pred CCCCCcccCCCCCCCcccccccccc-------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec--CCCeeEE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI-------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ--PAPWTSW 99 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~-------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W 99 (325)
.+|.|++++++|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.+.+.|
T Consensus 68 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 147 (211)
T 3tv3_L 68 ASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAW 147 (211)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEE
Confidence 3688999999999999999987543 112233 57777777765555689999999999884 3578999
Q ss_pred eeCCeeCCCCCcE--EEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 100 SKDGKPATPNARV--TIREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 100 ~~~~~~~~~~~~~--~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
++++..+...... .....++ ...|.|.++..+|.|.|+|.+.|..+...+.+
T Consensus 148 ~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 148 KADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred EECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 9999987642110 0111111 14588999988999999999999887555443
No 369
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.55 E-value=4.7e-14 Score=97.65 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=72.7
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCC---CeeEEeeCCeeCC---CCCcEEEEe---c---CCeEEEEEccCCCC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPA---PWTSWSKDGKPAT---PNARVTIRE---K---EDLRFLEISEVTLE 131 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~---~~v~W~~~~~~~~---~~~~~~~~~---~---~~~~~l~i~~~~~~ 131 (325)
..|.|+..|....+.+|++++|.|.+.|.|. |.|.|+|++.... ...++.+.. . .....|.|.+++..
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 3577888888899999999999999999888 9999999863211 122444321 1 12467999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEE
Q psy1095 132 DAGLYTIKVENNYGSVEATARLEIM 156 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~~~~~~l~v~ 156 (325)
|+|.|+|.+.|..|...+.+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999998888888875
No 370
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.55 E-value=1.7e-15 Score=118.38 Aligned_cols=112 Identities=14% Similarity=0.167 Sum_probs=81.1
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccC---CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-eeEEeeC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLT---SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WTSWSKD 102 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~~~ 102 (325)
+|.|.+++++|+|.|.|.+.+.... ...+. .+|.+...+....+.+|+.++|.|.+.+ .|.+ .+.|+++
T Consensus 71 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 150 (210)
T 1lk3_L 71 TLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKID 150 (210)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeC
Confidence 7899999999999999999875431 12222 3677776555444558999999999987 4554 8999999
Q ss_pred CeeCCCCCcE--EEEe-cCC----eEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 103 GKPATPNARV--TIRE-KED----LRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 103 ~~~~~~~~~~--~~~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
+..+...... .... .++ ...|.|.++..+|+|.|+|.+.|...
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 151 GTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp TEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred CccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 9988654111 1111 111 13689999999999999999998765
No 371
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.55 E-value=1.3e-14 Score=100.26 Aligned_cols=92 Identities=22% Similarity=0.403 Sum_probs=78.2
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..+|.|...+.+..+.+|+++.|.|.+.+.|.+ +.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 357889999999999999999999999988877 9999999999888888887777778899999999999999999998
Q ss_pred CCeeEEEEEEEEEEC
Q psy1095 143 NYGSVEATARLEIMD 157 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~ 157 (325)
. .....+.|.|..
T Consensus 85 ~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 85 Y--ALSLSAKLNFLE 97 (106)
T ss_dssp S--CCCCCBCEEEEC
T ss_pred C--CceEEEEEEEEE
Confidence 7 333445555553
No 372
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.55 E-value=5.8e-14 Score=96.21 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=72.0
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEE--EecC---CeEEEEEccCCCCCCeEEEE
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTI--REKE---DLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~---~~~~l~i~~~~~~d~G~Y~C 138 (325)
.||.+..... ...++.+.|.|.+.|.|.|.++|++++..+....+... ...+ ....|.|.+++.+|+|.|+|
T Consensus 3 ~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 79 (103)
T 1wwb_X 3 FAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTL 79 (103)
T ss_dssp CCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEE
T ss_pred CCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEE
Confidence 4666542222 34588899999999999999999999999887655322 1111 13459999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCC
Q psy1095 139 KVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~ 159 (325)
.+.|..|.....+.|.|...|
T Consensus 80 ~A~N~~G~~~~~~~l~V~~~P 100 (103)
T 1wwb_X 80 IAKNEYGKDEKQISAHFMGWP 100 (103)
T ss_dssp EEECSSCEEEEEEEECCSCCC
T ss_pred EEEeCCCcEeEEEEEEECCCC
Confidence 999999999988888887653
No 373
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=8.9e-14 Score=94.80 Aligned_cols=94 Identities=19% Similarity=0.328 Sum_probs=74.0
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ....|.|.+++.+|+|.|
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~--p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y 78 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPT--PEVTWSCGGRKIHSQEQGRFHIENTD----DLTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESC--CEEEEEETTEECCTTGGGTEEEEECS----SEEEEEESSCCGGGCEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCC--CceEEEECCEEeecCCCCEEEEEecC----CEEEEEEeecCcccCEEE
Confidence 355555556678899999999999999988 89999999998864333333322332 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|.|..|.....+.|.|.
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 79 TLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEEEEEEEEEE
Confidence 99999999998888887773
No 374
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.55 E-value=4.3e-15 Score=115.24 Aligned_cols=129 Identities=12% Similarity=0.086 Sum_probs=86.0
Q ss_pred eeecccCCCCcccCC-----CCCCCCCCCCCcccCCCCCCCcccccccccc--------c--ccccC---CCCeeEecCC
Q psy1095 12 SVKLTRPSGLMSGHS-----TPRSTPRSTPPRSISPLSSRTFTPYSLNSAI--------R--TRRLT---SSPRFYAVPH 73 (325)
Q Consensus 12 ~~~~~~~~~~~~~~~-----~~~~~~~~l~i~~v~~~d~G~Y~c~~~~~~~--------~--~~~~~---~~p~~~~~~~ 73 (325)
...|.+++..+.... ........|.|.+++.+|+|.|+|.+.+... . ...+. .+|.+...|.
T Consensus 37 ~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~ 116 (201)
T 1nkr_A 37 HFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG 116 (201)
T ss_dssp EEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC
T ss_pred EEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC
Confidence 456766665443211 1112335788999999999999999864311 0 11221 4577777665
Q ss_pred ceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecC-CeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 74 NKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKE-DLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
..+.+|++++|.|.+.+ +.+.+.|+|++..+...........+ ....|.|.+++ |+|.|+|.+.+..
T Consensus 117 -~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 117 -PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp -SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred -CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 46899999999999875 56789999999876532211111111 24579999998 9999999998653
No 375
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=2.4e-14 Score=98.45 Aligned_cols=91 Identities=19% Similarity=0.375 Sum_probs=76.5
Q ss_pred CCCeeEecCCc---eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEE
Q psy1095 64 SSPRFYAVPHN---KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKV 140 (325)
Q Consensus 64 ~~p~~~~~~~~---~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 140 (325)
.+|.+...|.. ..+.+|++++|.|.+.+.|.+ +.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 46777777776 789999999999999998888 99999999998877888777777788999999999999999999
Q ss_pred EeCCeeEEEEEEEEEECCC
Q psy1095 141 ENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 141 ~~~~~~~~~~~~l~v~~~~ 159 (325)
.|..+ .+.|.|..++
T Consensus 85 ~n~~~----~~~l~V~~~P 99 (104)
T 2e6p_A 85 EGVSA----FFGVTVQDPS 99 (104)
T ss_dssp SSCCC----CEEEEEECCC
T ss_pred CCceE----EEEEEEcCCC
Confidence 87633 4566776653
No 376
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.1e-13 Score=96.63 Aligned_cols=95 Identities=20% Similarity=0.402 Sum_probs=77.1
Q ss_pred ccCCCCeeEecCCc---eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEE
Q psy1095 61 RLTSSPRFYAVPHN---KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 61 ~~~~~p~~~~~~~~---~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 137 (325)
.+..||.+...|.. ..+.+|+++.|.|.+. .|.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+
T Consensus 6 ~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 84 (113)
T 2cpc_A 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYL 84 (113)
T ss_dssp CCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEE
T ss_pred ccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEE
Confidence 34456666666654 5688999999999995 7888999999999998877888777666778999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEECCCc
Q psy1095 138 IKVENNYGSVEATARLEIMDPRA 160 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v~~~~~ 160 (325)
|.+.| ....+.|.|...|.
T Consensus 85 C~a~n----~~~~~~l~V~~~p~ 103 (113)
T 2cpc_A 85 CEIDD----ESASFTVTVTEPPV 103 (113)
T ss_dssp EESSS----CEEEEEEEEECCCC
T ss_pred EEEec----CcEEEEEEEecCCc
Confidence 99977 34567788877643
No 377
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.55 E-value=8e-14 Score=96.35 Aligned_cols=93 Identities=23% Similarity=0.390 Sum_probs=75.8
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+....+.... .++ ....|.|.+++.+|+|.|
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y 84 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPP--PVVVWEKGGQQLAASERLSFP--ADG----AEHGLLLTAALPTDAGVY 84 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESC--CEEEEEETTEECCCCSSEECC--EET----TEEEEEESSCCGGGCEEE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCC--CEEEEEECCeECCCCCcEEEE--eCC----CEEEEEEccCCHHhCEEE
Confidence 466676677788999999999999999988 899999999988765443322 222 345899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEe
Q psy1095 244 TCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~ 264 (325)
+|.|.|..|.....+.|.|..
T Consensus 85 ~C~a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 85 VCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEEEEEc
Confidence 999999999988888887743
No 378
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.7e-13 Score=94.41 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=77.9
Q ss_pred cCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC----------cEEEEecCCeEEEEEccCCCC
Q psy1095 62 LTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA----------RVTIREKEDLRFLEISEVTLE 131 (325)
Q Consensus 62 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~ 131 (325)
...+|.|...+.+..+.+|+++.|.|.+.+ .|.+.|+|||.++..+. ++.+..++..+.|.|.+++.+
T Consensus 5 ~~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~ 82 (112)
T 2e6q_A 5 SSGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQ 82 (112)
T ss_dssp CCSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCST
T ss_pred ccCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHH
Confidence 345678999999999999999999999986 67899999999998877 888877777889999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEECCC
Q psy1095 132 DAGLYTIKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
|+|.|+|..-+ ....++.|.|...|
T Consensus 83 D~G~Y~~~~~~---~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 83 DSGALVGFSCP---GVQDSAALTIQESS 107 (112)
T ss_dssp TCSEEEEEEET---TEEEEEEEEEECSS
T ss_pred HCccEEEEEEC---CeeEEEEEEEeCCC
Confidence 99999885433 23457788888764
No 379
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.55 E-value=1e-15 Score=119.84 Aligned_cols=113 Identities=13% Similarity=0.151 Sum_probs=82.6
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccC---CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-eeEEeeC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLT---SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WTSWSKD 102 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~~~ 102 (325)
+|.|.+++++|+|.|+|.+.+.... ...+. .+|.+...+......+|+.++|.|.+.+ .|.+ .++|+++
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 151 (213)
T 3d9a_L 72 TLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKID 151 (213)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcC
Confidence 7899999999999999999876432 12222 2677776555444557999999999987 6665 8999999
Q ss_pred CeeCCCCCcEEE--Ee-cCC----eEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 103 GKPATPNARVTI--RE-KED----LRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 103 ~~~~~~~~~~~~--~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
+..+........ .. .++ ...|.|.++..+|.|.|+|.+.|....
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 152 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp TEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 998865411111 11 111 237999999999999999999997654
No 380
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.54 E-value=2.7e-13 Score=102.88 Aligned_cols=171 Identities=12% Similarity=0.124 Sum_probs=112.6
Q ss_pred CCeeEecCCceEecCCCeEEEEEEEEecCCC-eeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 65 SPRFYAVPHNKICDLGDTVRFQCSVTGQPAP-WTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 65 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
+..+.+.|....+.+|+++.|+|.+.. +.+ .+.|...-. +...........+.+.+++ +|.+.|.|.+...
T Consensus 2 ~f~v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~------~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~ 73 (196)
T 3bn3_B 2 PFWADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLR------RNGTQRGLRWLARQLVDIR-EPETQPVCFFRCA 73 (196)
T ss_dssp CSCEEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSE------EEEEEEETTEEEEEEEEEC-SSEECCEEEEEET
T ss_pred CcEEEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccC------CeeEccccCceEEEEEEEc-cCCCceEEEEECC
Confidence 345667788888999999999999864 444 577753211 1111111223348888998 7888799998776
Q ss_pred CeeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCC-CCeeEEeeCCEEeccCCCCceEEEecCC
Q psy1095 144 YGSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPN-DHDISWFRNNRLIKLDSDMKPEVQVDSK 222 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
.....+.+.|.|+..|.. +.+ .+....+.+|+.++|.|.+.+..|. ...+.|++++..+....... ....
T Consensus 74 ~~~~~~~v~l~Vy~~P~~---v~i--~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~----~~~~ 144 (196)
T 3bn3_B 74 RRTLQARGLIRTFQRPDR---VEL--MPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAG----EPPR 144 (196)
T ss_dssp TEEEEEECEEEEEBCCCC---CEE--CCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTT----SCTT
T ss_pred CCceEEEEEEEEecCCCc---CEE--ccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeecccccc----cccc
Confidence 667788899999887432 332 2233348899999999999875553 23489999998875322100 0000
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
.......+.+...+.+|...|+|.|.+..+
T Consensus 145 ~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 145 ARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp CCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred ccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 001235677766666666699999998765
No 381
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.54 E-value=5.5e-15 Score=115.64 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCCcccCCCCCCCccccccccccc--------cccc---CCCCeeEecCCceEecCCCeEEEEEEEEe-cCCCeeEEee
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR--------TRRL---TSSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAPWTSWSK 101 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~--------~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~~v~W~~ 101 (325)
+|.|.+++++|+|.|.|.+.+.... ...+ ..+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|++
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k 151 (213)
T 3nl4_L 72 TLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEV 151 (213)
T ss_dssp EEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEE
T ss_pred EEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEe
Confidence 6899999999999999999875432 1222 35677766665555778999999999988 8999999999
Q ss_pred CCeeCCCCCcEEEE---ecCC----eEEEEEccCCCCCCeEEEEEEE
Q psy1095 102 DGKPATPNARVTIR---EKED----LRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 102 ~~~~~~~~~~~~~~---~~~~----~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
++..+......... ..++ ...|.|..+..+|.|.|+|.+.
T Consensus 152 ~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 152 DGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 99988643101100 0111 1458899999999999999998
No 382
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.54 E-value=3e-14 Score=95.80 Aligned_cols=89 Identities=21% Similarity=0.358 Sum_probs=70.7
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC--EEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCe
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN--RLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEG 241 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 241 (325)
+|.+...+....+..|+.+.|.|.+.|.|. +.+.|++++ ..+... .... ... ....|.|.+++.+|+|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~--p~i~W~k~~~~~~~~~~--~~~~--~~~----~~~~L~i~~~~~~D~G 71 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPD--PTATWTVGDSGAALAPE--LLVD--AKS----STTSIFFPSAKRADSG 71 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSS--CEEEEECSTTTCBCSTT--SEEE--EET----TEEEEECTTBCGGGCE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCC--CEEEEEECCCCcccCCc--EEEE--ecC----CEEEEEECCCChhcCE
Confidence 355655556678899999999999999998 899999999 766433 1111 111 3468999999999999
Q ss_pred EEEEEEEeCCCcEEeEEEEEE
Q psy1095 242 EFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 242 ~Y~C~~~~~~~~~~~~~~l~v 262 (325)
.|+|.|.|..|.....+.|.|
T Consensus 72 ~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 72 NYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEcCCCeEEEEEEEEE
Confidence 999999999998888887776
No 383
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.54 E-value=1.6e-13 Score=95.86 Aligned_cols=90 Identities=21% Similarity=0.266 Sum_probs=77.2
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.||.+...+....+.+|+++.|.|.+.+. |.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC--- 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE---
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe---
Confidence 45688888888899999999999999764 6899999999998888888887777788999999999999999999
Q ss_pred CeeEEEEEEEEEECCC
Q psy1095 144 YGSVEATARLEIMDPR 159 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~ 159 (325)
+.....+.|.|...|
T Consensus 93 -~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 93 -GKERTSAMLTVRAMP 107 (113)
T ss_dssp -TTEEEEEEEEECCCC
T ss_pred -CCCCEEEEEEEeCCC
Confidence 455667788887653
No 384
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.54 E-value=2.5e-15 Score=118.00 Aligned_cols=118 Identities=16% Similarity=0.267 Sum_probs=81.0
Q ss_pred CCCCCcccCCCCCCCcccccccccc----------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-e
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI----------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-W 96 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~----------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~ 96 (325)
.+|.|.+++++|+|.|.|.+.+..+ ..+.+. .+|.+...+....+..|+.++|.|.+.+ .|.+ .
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~ 154 (218)
T 3s96_B 75 RYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVT 154 (218)
T ss_dssp EEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeE
Confidence 3589999999999999999977653 112222 5677766555555567899999999988 5766 8
Q ss_pred eEEeeCCeeCCCCCcE-E-EEecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeEEEE
Q psy1095 97 TSWSKDGKPATPNARV-T-IREKED---LRFLEISEVTLEDAGLYTIKVENNYGSVEAT 150 (325)
Q Consensus 97 v~W~~~~~~~~~~~~~-~-~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 150 (325)
+.|++++..+...... . ....+. ...|.|.....+|.|.|+|.+.|..+.....
T Consensus 155 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 155 VAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp EEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred EEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 9999999988652111 0 111111 1237788888889999999999988755443
No 385
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=4.8e-14 Score=98.04 Aligned_cols=99 Identities=25% Similarity=0.383 Sum_probs=77.3
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ....|.|.+++.+|+|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~k~g~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~ 80 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPK--PKIYWFKDGKQISPKSDHYTIQRDLD----GTCSLHTTASTLDDDGN 80 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSC--CEEEEECSSCBCCTTCSSEEEEECTT----CEEEEEESSCCTTTCSC
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCC--CEEEEEECCEECCCCCCeEEEEECCC----cEEEEEECCCChhhCEE
Confidence 4567777777788999999999999998887 89999999988765332211111111 23589999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
|+|.|.|..|.....+.|.|...+.
T Consensus 81 Y~C~a~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 81 YTIMAANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp CEEEEECTTCCEEECCCEEEECCSC
T ss_pred EEEEEEECCCeEEEEEEEEEECCCC
Confidence 9999999999998888888865544
No 386
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=8.5e-15 Score=100.17 Aligned_cols=90 Identities=20% Similarity=0.300 Sum_probs=74.7
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC----cEEEEecCCeEEEEEccCCCCCCeEEEE
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA----RVTIREKEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
..||.|...+.+..+.+|+++.|.|.+.+.| +.+.|+|++..+.... ++.+...+....|.|.+++.+|+|.|+|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 84 (101)
T 2edk_A 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQV 84 (101)
T ss_dssp CCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEE
T ss_pred cCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEE
Confidence 3567888888889999999999999999888 8999999999987766 6677777777889999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEC
Q psy1095 139 KVENNYGSVEATARLEIMD 157 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~ 157 (325)
.+.| ....+.|.|..
T Consensus 85 ~a~n----~~~~~~l~V~~ 99 (101)
T 2edk_A 85 ITNG----GQCEAELIVEE 99 (101)
T ss_dssp ECSS----CEECCBEEEEC
T ss_pred EEcC----CcEEEEEEEeC
Confidence 9976 23344566654
No 387
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=2e-14 Score=100.80 Aligned_cols=94 Identities=17% Similarity=0.303 Sum_probs=77.1
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEE-ecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIR-EKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.++.+...+.+..+.+|+++.|.|.+.+.|.|.+.|+|++..+....++.+. ..+....|.|.+++.+|+|.|+|.+
T Consensus 12 ~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-- 89 (115)
T 2cr6_A 12 RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA-- 89 (115)
T ss_dssp SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE--
T ss_pred CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE--
Confidence 3457888888899999999999999999999999999999998877666554 3355567999999999999999994
Q ss_pred CCeeEEEEEEEEEECCCcc
Q psy1095 143 NYGSVEATARLEIMDPRAI 161 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~~~~ 161 (325)
+.....+.|.|...+.+
T Consensus 90 --g~~~~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 90 --GDQRASAALRVTEKPSV 106 (115)
T ss_dssp --TTEECCEEEEEECCSSC
T ss_pred --CCeeEEEEEEEECCCce
Confidence 45566778888876543
No 388
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.53 E-value=5.8e-15 Score=115.46 Aligned_cols=116 Identities=16% Similarity=0.210 Sum_probs=82.8
Q ss_pred CCCCcccCCCCCCCccccccccccc------cccc----CCCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeEEee
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRL----TSSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTSWSK 101 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~~ 101 (325)
+|.|.+++++|+|.|.|.+.+.... ...+ ..+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++
T Consensus 74 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 153 (212)
T 1q0x_L 74 ALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKV 153 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEE
Confidence 7899999999999999999775431 1222 256777665554445679999999999885 443 899999
Q ss_pred CCeeCCCCCcEE--EEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 102 DGKPATPNARVT--IREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 102 ~~~~~~~~~~~~--~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
++..+....... ....++ ...|.|..+..+|.|.|+|.+.|.......
T Consensus 154 ~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 154 DGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp TTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 999886542110 111111 235889999899999999999998765433
No 389
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.53 E-value=1.3e-14 Score=119.16 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=88.8
Q ss_pred CCCCCcccCCCCCCCccccccccc----c------cccccCC----------------CCeeEecCCceEecCCCeEEEE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSA----I------RTRRLTS----------------SPRFYAVPHNKICDLGDTVRFQ 86 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~----~------~~~~~~~----------------~p~~~~~~~~~~v~~g~~v~l~ 86 (325)
.+|.|.+++++|+|.|.|.+.+.. . ..+.+.. ++.+...|....+.+|++++|.
T Consensus 101 ~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 180 (291)
T 2gki_A 101 AYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMS 180 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEE
T ss_pred EEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEE
Confidence 368999999999999999987763 1 0122223 3445556677789999999999
Q ss_pred EEEEecCCC------eeEEeeCC--eeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 87 CSVTGQPAP------WTSWSKDG--KPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 87 C~~~~~p~~------~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
|.+.+.+.+ .+.|+|+. .... ...++.........+|.|.+++.+|+|.|+|.+.+....
T Consensus 181 C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~ 260 (291)
T 2gki_A 181 CKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMY 260 (291)
T ss_dssp EEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCce
Confidence 999887765 89999963 2110 134565554455678999999999999999999885432
Q ss_pred E-EEEEEEEEECC
Q psy1095 147 V-EATARLEIMDP 158 (325)
Q Consensus 147 ~-~~~~~l~v~~~ 158 (325)
. .....|.|...
T Consensus 261 ~fg~gt~l~v~~~ 273 (291)
T 2gki_A 261 TFGSGTKLEIKHH 273 (291)
T ss_dssp EECCCEEEEEECC
T ss_pred EEcCCEEEEEEee
Confidence 2 22345555544
No 390
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.53 E-value=1.9e-14 Score=98.26 Aligned_cols=89 Identities=31% Similarity=0.548 Sum_probs=70.7
Q ss_pred CCeeEecC----CceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCc---EEEEecCCeEEEEEccCCCCCCeEEE
Q psy1095 65 SPRFYAVP----HNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNAR---VTIREKEDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 65 ~p~~~~~~----~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~G~Y~ 137 (325)
||.+...| ....+.+|+++.|.|.+.+.|.|.+.|++++..+....+ +... ....+|.|.+++..|+|.|+
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~ 81 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR--NQHWSLIMESVVPSDKGNYT 81 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEE--GGGTEEEECSCCGGGCEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEe--cCeEEEEEccCCcCCCEEEE
Confidence 56665444 356688999999999999999999999999998865432 2222 22346999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEE
Q psy1095 138 IKVENNYGSVEATARLEI 155 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v 155 (325)
|.+.|..|.....+.|.|
T Consensus 82 C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 82 CVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEeCCCEEEEEEEEEE
Confidence 999999998887777766
No 391
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=2.9e-13 Score=108.75 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=92.5
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+. ..+.+|+.++|.|.+.+ +. +.+.|+|++..+..... ............|.|.+++.+|+|.
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~--~~~~W~k~g~~~~~~~~-----~~~~~~~~~~~~L~I~~v~~~DsG~ 76 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RF--QHFLLHREGKFKDTLHL-----IGEHHDGVSKANFSIGPMMQDLAGT 76 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CC--SEEEEEEESTTCEEEEE-----ECBCCTTCEEEEEEECSCCTTTCEE
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CC--cEEEEEECCCCCCccee-----eeeccCCCceEEEEeecCCcccCEE
Confidence 3466665554 67889999999999863 33 78999998864421100 0000001134689999999999999
Q ss_pred EEEEEEeCCC-----cEEeEEEEEEEeeCCe---------ecCCCCce------------EEEEeC--------------
Q psy1095 243 FTCRVANELG-----EVVTSACLIVDVVKGK---------DLTSDGRL------------NIITVG-------------- 282 (325)
Q Consensus 243 Y~C~~~~~~~-----~~~~~~~l~v~~~~~~---------~~~~~~~~------------~~~~~~-------------- 282 (325)
|+|.+.+... ..+..+.|.|.....+ .+..++.+ ..+..+
T Consensus 77 Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~ 156 (257)
T 1b6u_A 77 YRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKV 156 (257)
T ss_dssp EEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCSEEEEEETTSSCEECCBCBCCS
T ss_pred EEEeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCcEEEEEECCcccCccccccccc
Confidence 9999986432 2234455655422110 11111111 011111
Q ss_pred ---CEEEEEEcCCCCCCCeEEEEEEECCCe-----eEEeEEEEEEecccC
Q psy1095 283 ---GTSVLTIEDITGDDSGKYQVHVSNQHG-----SDSCYASVAVEGRKI 324 (325)
Q Consensus 283 ---~~~~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p~ 324 (325)
....|.|.+++ |+|.|+|.|.|... ..+..+.|.|.++|.
T Consensus 157 ~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 157 NGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp SSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred CCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 14579999998 99999999997632 334458888888763
No 392
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=3.1e-13 Score=95.12 Aligned_cols=86 Identities=13% Similarity=0.134 Sum_probs=70.2
Q ss_pred cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
....+.+|+.+.|.|.+.|.|. +.+.|++++..+. ..+.... ..+ ....|.|.+++.+|+|.|+|.|.|..
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~--p~i~W~k~g~~l~-~~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y~C~a~N~~ 102 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPR--PQVVWTKGGAPLD-TSRVHVR--TSD----FDTVFFVRQAARSDSGEYELSVQIEN 102 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESC--CEEEEEETTEECC-CSSCEEE--ECS----SEEEEEESSCCTTTCEEEEEEEECSS
T ss_pred CCEEEECCCEEEEEEEEccCCC--CEEEEEECCEECC-CCcEEEE--ECC----CeEEEEECCCChhcCEEEEEEEEeCC
Confidence 4567889999999999999998 8999999999886 3333222 222 34679999999999999999999999
Q ss_pred CcEEeEEEEEEEeeC
Q psy1095 252 GEVVTSACLIVDVVK 266 (325)
Q Consensus 252 ~~~~~~~~l~v~~~~ 266 (325)
|.....+.|.|...+
T Consensus 103 G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 103 MKDTATIRIRVVEKA 117 (118)
T ss_dssp CEECCEEEEEEECCC
T ss_pred CeEEEEEEEEEEcCC
Confidence 998888888886543
No 393
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=4.1e-14 Score=96.36 Aligned_cols=88 Identities=30% Similarity=0.529 Sum_probs=71.6
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+....... .. ....|.|.+++.+|+|.|
T Consensus 11 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~----~~-----~~~~L~i~~v~~~D~G~Y 79 (99)
T 2yr3_A 11 APSFSSVLKDCAVIEGQDFVLQCSVRGTPV--PRITWLLNGQPIQYARSTC----EA-----GVAELHIQDALPEDHGTY 79 (99)
T ss_dssp EEEEEECCCCEEECTTCCEEEECEEEEESC--CCCEEEESSSBCSSCCCEE----ET-----TEEEEEECSCCTTCCBCE
T ss_pred CCceeecCCCCEEeCCCeEEEEEEEeeeCC--CeEEEEECCEECcccceEe----eC-----CeEEEEECCCChhhCEEE
Confidence 466666667788999999999999999988 8899999998776443211 11 246899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEE
Q psy1095 244 TCRVANELGEVVTSACLIV 262 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v 262 (325)
+|.|.|..|.....+.|.|
T Consensus 80 ~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 80 TCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEEEECSSCEEEEECCEEE
T ss_pred EEEEEECCCeEEEEEEEEE
Confidence 9999999998887777765
No 394
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.52 E-value=8.2e-14 Score=111.67 Aligned_cols=149 Identities=19% Similarity=0.211 Sum_probs=87.9
Q ss_pred CeeEecCCcEEEEEEEEecCCC---CCeeEEeeCCEEeccC------CCCceEEEecCC-------cceeEEEEEeCCCC
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPN---DHDISWFRNNRLIKLD------SDMKPEVQVDSK-------ENLVIARLKIPHVY 236 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~---~~~~~W~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~l~i~~~~ 236 (325)
...+..|+.+.|.|.+.+.|+. ...+.|++++...... ...... ...+. .......|.|.+++
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~sL~I~~v~ 90 (248)
T 3pv7_A 12 TQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQE-AFRPGAIVSPWRLKSGDASLRLPGIQ 90 (248)
T ss_dssp EEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEE-ESSTTCBCCHHHHTTTBCCEEESSCC
T ss_pred CeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCccc-ccCCceEEEeccCCCCcEEEEeCCCC
Confidence 4578899999999999988762 1249999863221100 000000 00000 00123469999999
Q ss_pred CCCCeEEEEEEEeCCCcEEeEEEEEEEeeCCeecC---------------------CCC-ceEEEEe-------------
Q psy1095 237 PEDEGEFTCRVANELGEVVTSACLIVDVVKGKDLT---------------------SDG-RLNIITV------------- 281 (325)
Q Consensus 237 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~---------------------~~~-~~~~~~~------------- 281 (325)
.+|+|.|+|.+.+..+.....+.|.|...+...+. +.. .+.....
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~ 170 (248)
T 3pv7_A 91 LEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISED 170 (248)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTT
T ss_pred HHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccc
Confidence 99999999999998877777777776432221110 111 1111111
Q ss_pred ----------CC----EEEEEEcCCCCCCCeEEEEEEECCCee--EEeEEEEEEecc
Q psy1095 282 ----------GG----TSVLTIEDITGDDSGKYQVHVSNQHGS--DSCYASVAVEGR 322 (325)
Q Consensus 282 ----------~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~ 322 (325)
++ ...|.|.....+|.|.|+|.|.|..+. ....+.|.|..+
T Consensus 171 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~~p 227 (248)
T 3pv7_A 171 VITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAARH 227 (248)
T ss_dssp EEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC-----
T ss_pred eeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEcCC
Confidence 11 136888888999999999999999986 556677777443
No 395
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=2.2e-13 Score=95.57 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=72.7
Q ss_pred CeeeecCcCeeEecCCcEEEEEEEEec---CCCCCeeEEeeCCEEe-cc--CCCCceEEEecCCcceeEEEEEeCCCCCC
Q psy1095 165 PKVLNGLENLRCCDGDSVTFECQVQVV---PPNDHDISWFRNNRLI-KL--DSDMKPEVQVDSKENLVIARLKIPHVYPE 238 (325)
Q Consensus 165 p~~~~~~~~~~v~~g~~v~l~C~~~~~---~~~~~~~~W~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 238 (325)
+.|...+....+.+|+.++|.|.+.+. |. +.|.|||+.... .. ....................|.|.+++.+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~--P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRK--PTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSC--CEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCC--CcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcc
Confidence 556777788899999999999999875 44 899999974211 11 12221111112222234579999999999
Q ss_pred CCeEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 239 DEGEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 239 d~G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
|+|.|+|.|.|..+.....+.|.|..
T Consensus 86 DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 86 FAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999977
No 396
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.52 E-value=1.5e-13 Score=91.90 Aligned_cols=84 Identities=26% Similarity=0.413 Sum_probs=70.4
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.++.+...|....+.+|+++.|.|.+.|.|.|.+.|++++..+..... ..|.|.+++.+|+|.|+|.+.|.
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECS
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC---------CeEEECCCCHHhCEEEEEEEEcC
Confidence 357788888888999999999999999999999999999998765432 36999999999999999999998
Q ss_pred CeeEE-EEEEEEEE
Q psy1095 144 YGSVE-ATARLEIM 156 (325)
Q Consensus 144 ~~~~~-~~~~l~v~ 156 (325)
.|... ..+.|.|.
T Consensus 73 ~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 73 RDSQDSKKVEIIID 86 (91)
T ss_dssp SCEEECCCEEEEEC
T ss_pred CCCEEeeeEEEEEe
Confidence 88544 34556654
No 397
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=5.5e-14 Score=97.57 Aligned_cols=95 Identities=21% Similarity=0.318 Sum_probs=74.1
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEec---CCCeeEEeeCCee-CCC--CCcEEEEec--C----CeEEEEEccCCCC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQ---PAPWTSWSKDGKP-ATP--NARVTIREK--E----DLRFLEISEVTLE 131 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~---p~~~v~W~~~~~~-~~~--~~~~~~~~~--~----~~~~l~i~~~~~~ 131 (325)
..+.|+..|.++.+.+|++++|.|.+.+. |.|.|.|||+... +.. ..++.+... . ....|.|.+++..
T Consensus 11 ~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp CSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred CcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 45567788888999999999999999874 7899999997422 211 234444321 1 1467999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 132 DAGLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 132 d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
|+|.|+|.+.|..+..++.+.|.|..+
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999889999988763
No 398
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.52 E-value=4.4e-14 Score=96.94 Aligned_cols=91 Identities=18% Similarity=0.384 Sum_probs=77.4
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..||.|...+....+.+|+++.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE---
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE---
Confidence 357788888888899999999999999998888 9999999999877888888877778899999999999999998
Q ss_pred CCeeEEEEEEEEEECC
Q psy1095 143 NYGSVEATARLEIMDP 158 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~ 158 (325)
.+.....+.|.|...
T Consensus 82 -~g~~~~~~~l~V~~~ 96 (103)
T 2e7b_A 82 -FGDQTTSATLTVTAL 96 (103)
T ss_dssp -CSSCBCCBCEEEECC
T ss_pred -ECCcEEEEEEEEEec
Confidence 344455667777665
No 399
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=94.14 Aligned_cols=92 Identities=24% Similarity=0.348 Sum_probs=74.4
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+...... ...... ..|.|.+++.+|+|.
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~--p~v~W~~~~~~~~~~~~~-~~~~~~-------~~L~i~~v~~~d~G~ 76 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPL--PVISWLKEGFTFPGRDPR-ATIQEQ-------GTLQIKNLRISDTGT 76 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSC--CEEEEEESSSEESSSCSS-CEECTT-------CCEEEESCCTTTCCE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCC--CEEEEEECCEECCCCCCC-EEEcCC-------CEEEEccCCcccCEE
Confidence 4677877777888999999999999999888 889999999887633221 111122 379999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEe
Q psy1095 243 FTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
|+|.|.|..|.....+.|.|..
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 77 YTCVATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp EEEEEECSSCCCBCCEEEEEES
T ss_pred EEEEEEcCCCCEEEEEEEEEec
Confidence 9999999999988888888743
No 400
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.52 E-value=1.7e-14 Score=117.85 Aligned_cols=110 Identities=16% Similarity=0.188 Sum_probs=81.5
Q ss_pred CCCCcccCCCCCCCccccccccc--------------ccccccCC---------------CCeeEecCCceEecCCCeEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSA--------------IRTRRLTS---------------SPRFYAVPHNKICDLGDTVR 84 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~--------------~~~~~~~~---------------~p~~~~~~~~~~v~~g~~v~ 84 (325)
+|.|++++++|+|.|.|.+.+.. ...+.+.. ++.+...|. ..+.+|++|+
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~ 158 (280)
T 3fku_X 80 YMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTAT 158 (280)
T ss_dssp EEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEE
T ss_pred EEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEE
Confidence 68999999999999999997751 11122223 455555555 7899999999
Q ss_pred EEEEEEe-cC-CCeeEEeeC--CeeCC------------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 85 FQCSVTG-QP-APWTSWSKD--GKPAT------------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 85 l~C~~~~-~p-~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
|.|.+.+ .+ .+.+.|||. +.... ...++.........+|.|.+++.+|+|.|+|.+.+..
T Consensus 159 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 159 LTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 9999987 43 478999983 22111 1246666655667789999999999999999998865
No 401
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.52 E-value=3.9e-15 Score=116.80 Aligned_cols=113 Identities=14% Similarity=0.217 Sum_probs=80.3
Q ss_pred CCCCcccCCCCCCCcccccccccc-------cccccC---CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-eeEEee
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI-------RTRRLT---SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WTSWSK 101 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~-------~~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~~ 101 (325)
+|.|.+++++|+|.|.|.+.+... ..+.+. .+|.+...+......+|+.++|.|.+.+ .|.+ .++|++
T Consensus 73 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 152 (216)
T 2xzc_L 73 TLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV 152 (216)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEE
Confidence 688999999999999999987643 112222 4677766444333346899999999988 5554 899999
Q ss_pred CCeeCCCCCcEE--EEe-cCC----eEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 102 DGKPATPNARVT--IRE-KED----LRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 102 ~~~~~~~~~~~~--~~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
++..+....... ... .++ ...|.|..+..+|+|.|+|.+.|....
T Consensus 153 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 153 DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp TTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 999886541111 111 111 126889999999999999999987643
No 402
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=6.7e-14 Score=95.24 Aligned_cols=90 Identities=20% Similarity=0.269 Sum_probs=71.9
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.|...+.+..+.+|+.+.|.|.+ .|. +.+.|+|+|..+..+.++... .++ ....|.|.+++.+|+|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~--p~v~W~k~g~~l~~~~r~~i~--~~~----~~~~L~I~~v~~~D~G~Y 76 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SEN--IPGKWTKNGLPVQESDRLKVV--QKG----RIHKLVIANALTEDEGDY 76 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSC--CCEEEEETTEECCCCSSEEEE--ECS----SEEEEEESSCCGGGCSEE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCC--CeEEEEECCEECCCCCcEEEE--EeC----CEEEEEECCCChhhCEEE
Confidence 5677777778899999999999999 566 789999999998766654433 344 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEee
Q psy1095 244 TCRVANELGEVVTSACLIVDVV 265 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~ 265 (325)
+|.|.|. ....++.|.|...
T Consensus 77 ~C~a~N~--~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 77 VFAPDAY--NVTLPAKVHVISG 96 (100)
T ss_dssp EEEESSS--CCCEEEEEEEECC
T ss_pred EEEEcCC--CeeEEEEEEEeCC
Confidence 9999997 4556677777543
No 403
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=1.2e-13 Score=94.76 Aligned_cols=91 Identities=22% Similarity=0.265 Sum_probs=77.5
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.|...+....+.+|+++.|.|. .+.|.+.+.|++++..+....++.+...+....|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD---- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----
Confidence 5778888888899999999999999 47888999999999999888888887777777899999999999999998
Q ss_pred CeeEEEEEEEEEECCC
Q psy1095 144 YGSVEATARLEIMDPR 159 (325)
Q Consensus 144 ~~~~~~~~~l~v~~~~ 159 (325)
.+.....+.|.|...+
T Consensus 82 ~g~~~~~~~l~V~~~p 97 (103)
T 2dku_A 82 IGQAQSRAQLLVQGRR 97 (103)
T ss_dssp CSSCBCCEEEEEECSC
T ss_pred eCCceEEEEEEEeCcc
Confidence 3445556778887653
No 404
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.51 E-value=2.8e-13 Score=100.18 Aligned_cols=97 Identities=23% Similarity=0.551 Sum_probs=77.6
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+....++....... ....|.|.+++.+|+|.
T Consensus 40 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~--p~v~W~k~g~~~~~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~ 112 (154)
T 1fhg_A 40 VKPYFTKTILDMEVVEGSAARFDCKVEGYPD--PEVMWFKDDNPVKESRHFQIDYDEE-----GNCSLTISEVCGDDDAK 112 (154)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESC--CEEEEEETTEECCCSSSEEEEECTT-----CEEEEEESSCCGGGCEE
T ss_pred CCCeEEccCCcEEEeCCCeEEEEEEEEEecC--CEEEEEECCEECCCCCcEEEEECCC-----CeEEEEECCCChhcCEE
Confidence 3567777777788999999999999999998 8999999999887654433221111 24689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
|+|.|.|..|.....+.|.|...+
T Consensus 113 Y~C~a~N~~G~~~~~~~l~V~~~p 136 (154)
T 1fhg_A 113 YTCKAVNSLGEATCTAELLVETMG 136 (154)
T ss_dssp EEEEEEETTEEEEEEEEEEEECC-
T ss_pred EEEEEEECCCeEEEEEEEEEeCcC
Confidence 999999999998888888885443
No 405
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.51 E-value=8.6e-15 Score=115.37 Aligned_cols=116 Identities=13% Similarity=0.181 Sum_probs=81.3
Q ss_pred CCCCCcccCCCCCCCcccccccccc------c----ccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-e
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI------R----TRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-W 96 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~------~----~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~ 96 (325)
.+|.|++++++|+|.|.|.+.+... . ...+. .+|.+...+....+.+|+.++|.|.+.+. |.| .
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 160 (222)
T 1q9r_B 81 LYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT 160 (222)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCE
T ss_pred EEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCE
Confidence 3789999999999999999987542 1 12222 35666555444446789999999999985 888 9
Q ss_pred eEEeeCCeeCCCCCcEEEEecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 97 TSWSKDGKPATPNARVTIREKED---LRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 97 v~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
+.|++++..+...........+. ...|.|.++...| |.|+|.+.|..+....
T Consensus 161 v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 161 VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp EEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred EEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 99999987654211111111111 2358898998889 9999999998875443
No 406
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.51 E-value=3.7e-13 Score=91.17 Aligned_cols=86 Identities=20% Similarity=0.420 Sum_probs=70.1
Q ss_pred ecCcCeeEecCCcEEEEEEEEec-CCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEE
Q psy1095 169 NGLENLRCCDGDSVTFECQVQVV-PPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRV 247 (325)
Q Consensus 169 ~~~~~~~v~~g~~v~l~C~~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 247 (325)
..+....+.+|+.+.|.|.+.+. |. +.+.|++++..+....+.... ..+ ....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~--~~v~W~~~~~~~~~~~~~~~~--~~~----~~~~L~i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQS--TQVTWYFGVRQLENSEKYEIT--YED----GVAILYVKDITKLDDGTYRCKV 77 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTT--CEEEEEETTEECCSSSSEEEE--EET----TEEEEEECSCCGGGCEEEEEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCC--CEEEEEECCEECcCCCCEEEE--EcC----CeEEEEEecCChhhCeEEEEEE
Confidence 34456788999999999999987 66 899999999988765544332 222 2468999999999999999999
Q ss_pred EeCCCcEEeEEEEEE
Q psy1095 248 ANELGEVVTSACLIV 262 (325)
Q Consensus 248 ~~~~~~~~~~~~l~v 262 (325)
.|..|.....+.|.|
T Consensus 78 ~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 78 VNDYGEDSSYAELFV 92 (97)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred ECCCCeEeEEEEEEE
Confidence 999999988888877
No 407
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.51 E-value=7.1e-16 Score=120.68 Aligned_cols=113 Identities=12% Similarity=0.188 Sum_probs=80.4
Q ss_pred CCCCcccCCCCCCCcccccccccc--------ccccc----CCCCeeEecCCceEecCCCeEEEEEEEEec-CC-CeeEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI--------RTRRL----TSSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA-PWTSW 99 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~v~W 99 (325)
+|.|.+++++|+|.|.|.+.+... ....+ ..+|.+...+....+.+|+.+.|.|.+.+. |. +.++|
T Consensus 70 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 149 (212)
T 1nfd_E 70 TLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTW 149 (212)
T ss_dssp EEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEE
T ss_pred EEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEE
Confidence 688999999999999999984111 11222 256777665554445679999999999886 54 79999
Q ss_pred eeCCeeCCCCCcEE-EEe-cCC---eEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 100 SKDGKPATPNARVT-IRE-KED---LRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 100 ~~~~~~~~~~~~~~-~~~-~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
++++..+....... ... .++ ...|.|.++..+|+|.|+|.+.|....
T Consensus 150 ~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 150 KANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp EETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred EECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 99998876442210 000 111 134889999999999999999987654
No 408
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.51 E-value=1.2e-14 Score=116.64 Aligned_cols=109 Identities=16% Similarity=0.279 Sum_probs=78.4
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccCC-------------------CCeeEecCCceEecCCCeEEEEEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLTS-------------------SPRFYAVPHNKICDLGDTVRFQCS 88 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~~-------------------~p~~~~~~~~~~v~~g~~v~l~C~ 88 (325)
+|.|++++++|+|.|.|.+.+.... .+.+.. ++.+...|....+.+|++++|.|.
T Consensus 75 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 154 (250)
T 3esu_F 75 SLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCK 154 (250)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEE
Confidence 6899999999999999999765321 122222 234455666778999999999999
Q ss_pred EEecC--CCeeEEeeC--CeeCC-----------------CCCcEEEEec--CCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 89 VTGQP--APWTSWSKD--GKPAT-----------------PNARVTIREK--EDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 89 ~~~~p--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
+.+.+ .+.+.|+|+ +..+. ...++.+... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 155 ~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 155 DSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp CCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 98766 789999987 33221 0135554432 4456799999999999999999986
No 409
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.51 E-value=1.1e-13 Score=105.05 Aligned_cols=141 Identities=16% Similarity=0.205 Sum_probs=86.3
Q ss_pred CeeEecCCcEEEEEEEEecCCCCCeeEEee--CCEEeccC--------CCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPNDHDISWFR--NNRLIKLD--------SDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+....|+.|+|.|.......+.+.+.|++ ++..+..- ...+.....+ +.|.|.+++.+|+|.
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~n-------gsL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKN-------GTLKIKHLKTDDQDI 80 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTT-------SCEEECSCCGGGCEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCC-------CCEEECCCChhhCEE
Confidence 456778999999994421111126899999 87766210 1111221223 389999999999999
Q ss_pred EEEEEEeCCCcEE--eEEEEEEEeeCC-eecC-------------CCCceE-EEEeCCE------EEEEEcCCCCCCCeE
Q psy1095 243 FTCRVANELGEVV--TSACLIVDVVKG-KDLT-------------SDGRLN-IITVGGT------SVLTIEDITGDDSGK 299 (325)
Q Consensus 243 Y~C~~~~~~~~~~--~~~~l~v~~~~~-~~~~-------------~~~~~~-~~~~~~~------~~l~i~~v~~~d~G~ 299 (325)
|+|.+.|..|... ..+.|.|..... +.+. .+.... .+..++. ..|.+. ...+|+|.
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~~~~i~~~-~~~~d~G~ 159 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITHK-WTTSLSAK 159 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEEEESSCEEEE-CCSCEEEE
T ss_pred EEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECCCCCcEEEEe-cccCCCcE
Confidence 9999999888754 345566643211 1111 111111 1222221 123332 25789999
Q ss_pred EEEEEECCCeeEEeEEEEEEec
Q psy1095 300 YQVHVSNQHGSDSCYASVAVEG 321 (325)
Q Consensus 300 Y~C~a~n~~g~~~~~~~l~V~~ 321 (325)
|+|.|.|..|..+....+...+
T Consensus 160 Y~C~a~N~~~~~~s~~~~~c~~ 181 (182)
T 1hnf_A 160 FKCTAGNKVSKESSVEPVSCPE 181 (182)
T ss_dssp EEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEEEeCCCCcEEcceecCCC
Confidence 9999999999998887775443
No 410
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.51 E-value=7.6e-15 Score=114.64 Aligned_cols=114 Identities=13% Similarity=0.211 Sum_probs=79.8
Q ss_pred CCCCcccCCCCCCCcccccccccc----cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeEEeeCC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI----RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTSWSKDG 103 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~----~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~~~~ 103 (325)
+|.|++++++|+|.|.|.+.+... ....+. .+|.+...+....+.+|+.++|.|.+.+. |.| .++|++++
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 158 (210)
T 3d9a_H 79 YLDLNSVTTEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 158 (210)
T ss_dssp EEEECSCCGGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred EEEECCCCcccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCC
Confidence 799999999999999999987421 112222 35666655544457789999999999886 888 99999988
Q ss_pred eeCCCCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEE
Q psy1095 104 KPATPNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVE 148 (325)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 148 (325)
..+...........+ ....|.|..+..+| |.|+|.+.|..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 159 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred cccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 754211100011111 12458888888877 999999999887543
No 411
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.1e-14 Score=99.00 Aligned_cols=98 Identities=28% Similarity=0.439 Sum_probs=78.4
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.......... ..+ ....|.|.+++.+|+|.
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~~~-~~~----~~~~L~i~~v~~~D~G~ 80 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPT--PDLSWQLDGKPVRPDSAHKMLV-REN----GVHSLIIEPVTSRDAGI 80 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSC--CEEECBBSSSBCCCCSSEEEEE-CTT----SCEEEEESSCCGGGCSB
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCC--CEEEEEECCEECCCCCceEEEE-ecC----CeEEEEEeeCCcccCEE
Confidence 4577877777888999999999999999888 8999999998776544332221 111 23589999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
|+|.|.|..|.....+.|.|...+.
T Consensus 81 Y~C~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 81 YTCIATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp BCEEEECSSCEEEECCEEEEECCCC
T ss_pred EEEEEECCCCEEEEEEEEEEeCCCC
Confidence 9999999999988888888865544
No 412
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=1.3e-13 Score=94.60 Aligned_cols=78 Identities=19% Similarity=0.267 Sum_probs=67.0
Q ss_pred cCCCCeeEecCCc-eEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCC-CcEEEEecCCeEEEEEccCCCCCCeEEEEE
Q psy1095 62 LTSSPRFYAVPHN-KICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPN-ARVTIREKEDLRFLEISEVTLEDAGLYTIK 139 (325)
Q Consensus 62 ~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 139 (325)
...+|.|+..+.+ ..+.+|+++.|.|.+ +.|.+.+.|+|++..+... .++.+...+....|.|.+++.+|+|.|+|.
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCV 90 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEE
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEE
Confidence 3456777776666 789999999999999 6888899999999998876 677777666677899999999999999999
Q ss_pred E
Q psy1095 140 V 140 (325)
Q Consensus 140 ~ 140 (325)
+
T Consensus 91 a 91 (104)
T 1pd6_A 91 V 91 (104)
T ss_dssp E
T ss_pred E
Confidence 9
No 413
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.50 E-value=2.3e-13 Score=91.17 Aligned_cols=88 Identities=19% Similarity=0.193 Sum_probs=69.2
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.|...+.+..+.+|+.+.|.|.+.+ ++ +.+.|+++|..+..+.++... .++ ....|.|.+++.+|+|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~--~~v~W~k~g~~i~~~~~~~i~--~~g----~~~~L~I~~v~~~D~G~ 74 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PD--VHGQWKLKGQPLAASPDCEII--EDG----KKHILILHNCQLGMTGE 74 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SS--CCCEEEETTEECCCBTTEEEE--EET----TEEEEEECSCCGGGCEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CC--CeEEEEECCEECcCCCCEEEE--EEC----CEEEEEECCCChhhCEE
Confidence 3577777788889999999999999975 44 679999999998766654433 333 34689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEE
Q psy1095 243 FTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|+|.|.|. ..++.|.|.
T Consensus 75 Y~C~a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 75 VSFQAANT----KSAANLKVK 91 (93)
T ss_dssp EEEEETTE----EEEEEEEEE
T ss_pred EEEEECCC----cEEEEEEEE
Confidence 99999763 456667663
No 414
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.50 E-value=1.2e-14 Score=113.79 Aligned_cols=105 Identities=12% Similarity=0.104 Sum_probs=74.2
Q ss_pred CCCCCcccCCCCCCCccccccccccc---------ccccCC---CCeeEecCCceEecCCCeEEEEEEEEe----cCCCe
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR---------TRRLTS---SPRFYAVPHNKICDLGDTVRFQCSVTG----QPAPW 96 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~---------~~~~~~---~p~~~~~~~~~~v~~g~~v~l~C~~~~----~p~~~ 96 (325)
.+|.|++++++|+|.|.|.+.+.... .+.+.. +|.+.. +. .+.+|+.++|.|.+.+ .|.|.
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~ 158 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLT 158 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCE
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCce
Confidence 47899999999999999998765411 112222 444433 22 2678999999999976 37889
Q ss_pred eEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 97 TSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 97 v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
++|++++...... . ......|.|..+..+|.|.|+|.+.|..+.
T Consensus 159 v~W~~~~~~~~~~-~-----~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 159 FSWTGNALSPLDP-E-----TTRSSELTLTPRPEDHGTNLTCQMKRQGAQ 202 (214)
T ss_dssp EEEESSTTSSSCS-S-----CCCSSEEEECCCTTCCSCEEEEEEECC---
T ss_pred EEEeCCCCccCCC-C-----ceeEEEEEEecccHHcCcEEEEEEEeCCCC
Confidence 9999998654322 1 123356999999999999999999997543
No 415
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.50 E-value=8.3e-15 Score=115.21 Aligned_cols=116 Identities=11% Similarity=0.179 Sum_probs=78.1
Q ss_pred CCCCCcccCCCCCCCcccccccccc---------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-ee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI---------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WT 97 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~---------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v 97 (325)
.+|.|.+++++|+|.|.|.+.+... ....+. .+|.+...+....+.+|+.+.|.|.+.+ .|.| .+
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 158 (219)
T 1c1e_H 79 AYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTV 158 (219)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEE
T ss_pred EEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEE
Confidence 4799999999999999999987531 112222 2366655544445678999999999998 8988 99
Q ss_pred EEeeCCeeCCCCCcEEEEecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 98 SWSKDGKPATPNARVTIREKED---LRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 98 ~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
+|++++..+...........+. ...|.|. ....|.|.|+|.+.|..+....
T Consensus 159 ~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~-~~~~d~g~Y~C~a~n~~~~~~~ 212 (219)
T 1c1e_H 159 TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVP-SSPRPSETVTCNVAHPASSTKV 212 (219)
T ss_dssp EEGGGTBCTTEEECCCEESSSCEEEEEEEEEE-SSSTTTSCCEEEEEEGGGTEEE
T ss_pred EEEeCCcccceEecCCcccCCeEEEEEEEEEe-cccCCCCEEEEEEEeCCCCccE
Confidence 9999987642110000011111 1358884 4444669999999998775443
No 416
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.50 E-value=5.4e-14 Score=110.88 Aligned_cols=118 Identities=11% Similarity=0.119 Sum_probs=79.6
Q ss_pred CCCCCcccCCCCCCCcccccccccc-----------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI-----------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP- 95 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~-----------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~- 95 (325)
.+|+|++++++|+|.|.|.+.+..+ ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.+
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 158 (223)
T 1dee_B 79 LYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSI 158 (223)
T ss_dssp EEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCC
T ss_pred EEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCe
Confidence 3789999999999999999976531 122222 35565543322235789999999999886 777
Q ss_pred eeEEee-CCeeCCCCCcEE-EEecCC---eEEEEEccCCC--CCCeEEEEEEEeCCeeEEEE
Q psy1095 96 WTSWSK-DGKPATPNARVT-IREKED---LRFLEISEVTL--EDAGLYTIKVENNYGSVEAT 150 (325)
Q Consensus 96 ~v~W~~-~~~~~~~~~~~~-~~~~~~---~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~~~ 150 (325)
.++|++ ++..+.....+. ....+. ...|.|..... +|.|.|+|.+.|..+.....
T Consensus 159 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 159 TFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp EEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred EEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 999999 888775400000 001111 23477877766 78999999999988765443
No 417
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.50 E-value=3.5e-14 Score=114.40 Aligned_cols=111 Identities=15% Similarity=0.258 Sum_probs=77.8
Q ss_pred CCCCcccCCCCCCCcccccccccc--------cccccCCCC--------------------eeEecCCceEecCCCeEEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI--------RTRRLTSSP--------------------RFYAVPHNKICDLGDTVRF 85 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~~~~p--------------------~~~~~~~~~~v~~g~~v~l 85 (325)
+|.|++++++|+|.|.|.+.+... ..+.+..+| .....+....+.+|++++|
T Consensus 75 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L 154 (256)
T 3ux9_B 75 SLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRL 154 (256)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEE
T ss_pred EEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEE
Confidence 689999999999999999976421 112222222 1233344556899999999
Q ss_pred EEEEEecC--CCeeEEeeC--CeeC------C-----------CCCcEEEEec--CCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 86 QCSVTGQP--APWTSWSKD--GKPA------T-----------PNARVTIREK--EDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 86 ~C~~~~~p--~~~v~W~~~--~~~~------~-----------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.|.+.+.+ .+.+.|+|+ +..+ . ...++.+... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 155 ~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 234 (256)
T 3ux9_B 155 SCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYI 234 (256)
T ss_dssp EEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEc
Confidence 99998866 789999986 2211 1 1125555433 3466799999999999999999988
Q ss_pred CC
Q psy1095 143 NY 144 (325)
Q Consensus 143 ~~ 144 (325)
..
T Consensus 235 ~~ 236 (256)
T 3ux9_B 235 DF 236 (256)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 418
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.50 E-value=5.4e-14 Score=96.96 Aligned_cols=92 Identities=18% Similarity=0.416 Sum_probs=75.9
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
..|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+....+.... ..+ ....|.|.+++.+|+|.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~--p~v~W~k~g~~l~~~~~~~~~--~~~----~~~~L~I~~v~~~D~G~ 84 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPV--PTVTWLRKGQVLSTSARHQVT--TTK----YKSTFEISSVQASDEGN 84 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSC--CBCCBCSSSSCCTTCSSEEEE--ECS----SEEEEEECCCCSSCCSE
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCC--CEEEEEECCEECCCCCCEEEE--ECC----CEEEEEECcCCchhCEE
Confidence 4577777788889999999999999999888 899999999887655443322 222 34689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEE
Q psy1095 243 FTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v 262 (325)
|+|.|.|..|.....+.|.|
T Consensus 85 Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 85 YSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp EEECCBCSSCBCCEEEEEEE
T ss_pred EEEEEEeCCCeEEEEEEEEE
Confidence 99999999999888888776
No 419
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.50 E-value=9.1e-15 Score=114.42 Aligned_cols=112 Identities=16% Similarity=0.173 Sum_probs=81.2
Q ss_pred CCCCcccCCCCCCCcccccccccc------ccccc---CCCCeeEecCCceEecCCCeEEEEEEEEecCC--CeeEEeeC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI------RTRRL---TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPA--PWTSWSKD 102 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~v~W~~~ 102 (325)
+|.|.+++++|+|.|.|.+.+... ....+ ..+|.+...+....+..|+.++|.|.+.+.+. +.+.|+++
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~ 151 (213)
T 3r06_A 72 SFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVD 151 (213)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEET
T ss_pred EEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEEC
Confidence 789999999999999999976532 12233 46777877776666678999999999988543 48999999
Q ss_pred CeeCCCCC--cEEEEe-cCC----eEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 103 GKPATPNA--RVTIRE-KED----LRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 103 ~~~~~~~~--~~~~~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
+..+.... ...... .++ ...|.|.....+|.|.|+|.+.|...
T Consensus 152 g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 152 GSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp TEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 99886531 111111 111 23577888888899999999998764
No 420
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=96.82 Aligned_cols=97 Identities=25% Similarity=0.461 Sum_probs=71.6
Q ss_pred ccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCC-----cEEEEecCCeEEEEEc--cCCCCCC
Q psy1095 61 RLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNA-----RVTIREKEDLRFLEIS--EVTLEDA 133 (325)
Q Consensus 61 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~~~l~i~--~~~~~d~ 133 (325)
.+..||.+...|....+.+|+++.|.|.+.|.|.|.++|++++..+.... .......+....+.|. +++.+|+
T Consensus 5 ~~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~ 84 (117)
T 2v9t_A 5 QEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (117)
T ss_dssp CCCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSC
T ss_pred cccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcC
Confidence 44568899998999999999999999999999999999999998886542 2222222322222222 5679999
Q ss_pred eEEEEEEEeCCeeEEE-EEEEEEEC
Q psy1095 134 GLYTIKVENNYGSVEA-TARLEIMD 157 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~-~~~l~v~~ 157 (325)
|.|+|.+.|..|.... .+.|.+..
T Consensus 85 G~Y~C~a~N~~G~~~s~~~~l~~~~ 109 (117)
T 2v9t_A 85 GVYVCVARNYLGEAVSHDASLEVAA 109 (117)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC-
T ss_pred EEEEEEEEeCccceEeeeEEEEhhh
Confidence 9999999999997654 45555544
No 421
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.50 E-value=1.9e-13 Score=94.62 Aligned_cols=90 Identities=20% Similarity=0.329 Sum_probs=75.9
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
..||.|...+....+.+|++++|.|.+.+. |.+.|++++..+....++.+...+....|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 367888888888899999999999998754 689999999998877888887777778899999999999999999933
Q ss_pred CCeeEEEEEEEEEECC
Q psy1095 143 NYGSVEATARLEIMDP 158 (325)
Q Consensus 143 ~~~~~~~~~~l~v~~~ 158 (325)
....+.|.|...
T Consensus 84 ----~~~~~~l~V~~~ 95 (108)
T 2dm7_A 84 ----ERTSATLTVRAL 95 (108)
T ss_dssp ----EEEEEECEEECC
T ss_pred ----CEEEEEEEEecC
Confidence 456677777764
No 422
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=5.1e-15 Score=117.61 Aligned_cols=114 Identities=12% Similarity=0.255 Sum_probs=80.9
Q ss_pred CCCCcccCCCCCCCcccccccccc--------ccccc----CCCCeeEecCCceEecCCCeEEEEEEEEec-CC-CeeEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI--------RTRRL----TSSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA-PWTSW 99 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~v~W 99 (325)
+|.|.+++++|+|.|.|.+.+... ....+ ..+|.+...+......+|+.++|.|.+.+. |. +.++|
T Consensus 92 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 171 (234)
T 2j6e_L 92 SLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAW 171 (234)
T ss_dssp EEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEE
T ss_pred EEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEE
Confidence 688999999999999999987654 11222 145666554444344568999999999885 44 48999
Q ss_pred eeCCeeCCCCCcEE-E-EecC----CeEEEEEccCCCCCCeEEEEEEEeCCeeE
Q psy1095 100 SKDGKPATPNARVT-I-REKE----DLRFLEISEVTLEDAGLYTIKVENNYGSV 147 (325)
Q Consensus 100 ~~~~~~~~~~~~~~-~-~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 147 (325)
++++..+....... . ...+ ....|.|.++..+|.|.|+|.+.|.....
T Consensus 172 ~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 172 KADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp EETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred EECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 99999886541110 0 0011 12468899999999999999999987653
No 423
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.49 E-value=1.7e-14 Score=115.28 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=77.8
Q ss_pred CCCCCcccCCCCCCCcccccccccc------cccccCCCC-------------eeEecCCceEecCCCeEEEEEEEEecC
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI------RTRRLTSSP-------------RFYAVPHNKICDLGDTVRFQCSVTGQP 93 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~~~~p-------------~~~~~~~~~~v~~g~~v~l~C~~~~~p 93 (325)
.+|.|.+++++|+|.|.|.+.+... ..+.+..+| .+...+....+.+|++++|.|.+.+.|
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~ 150 (242)
T 2znx_A 71 FTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDS 150 (242)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSC
T ss_pred EEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccc
Confidence 3689999999999999999987532 122333333 234444455689999999999998865
Q ss_pred --CCeeEEeeCC--eeC-------C---------CCCcEEEEe--cCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 94 --APWTSWSKDG--KPA-------T---------PNARVTIRE--KEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 94 --~~~v~W~~~~--~~~-------~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
.+.+.|+|++ ..+ . ...++.+.. .....+|.|.+++.+|+|.|+|.+.+
T Consensus 151 ~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 221 (242)
T 2znx_A 151 ITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXD 221 (242)
T ss_dssp GGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETT
T ss_pred cCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccC
Confidence 5789999842 221 0 133555543 23456899999999999999999976
No 424
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.49 E-value=8.3e-15 Score=116.56 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=81.9
Q ss_pred CCCCCcccCCCCCCCcccccccccc------ccccc---CCCCeeEecCCceEecCCCeEEEEEEEEe-cC-CCeeEEee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI------RTRRL---TSSPRFYAVPHNKICDLGDTVRFQCSVTG-QP-APWTSWSK 101 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p-~~~v~W~~ 101 (325)
.+|.|++++++|+|.|.|.+.+... ....+ ..+|.+...+....+.+|+.++|.|.+.+ .| .+.++|++
T Consensus 94 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k 173 (237)
T 3sob_L 94 FTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV 173 (237)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEE
Confidence 4689999999999999999976442 11222 35677766555555557899999999988 55 58999999
Q ss_pred CCeeCCCCC--cEEEEe-cCC----eEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 102 DGKPATPNA--RVTIRE-KED----LRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 102 ~~~~~~~~~--~~~~~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
++..+.... ...... .++ ...|.|.....+|.|.|+|.+.|....
T Consensus 174 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 174 DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp TTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 999886431 000011 111 245888999999999999999997653
No 425
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.49 E-value=4.7e-14 Score=108.59 Aligned_cols=106 Identities=12% Similarity=0.095 Sum_probs=73.1
Q ss_pred CCCCCCcccCCCCCCCcccccccccccc-----cccCCC---CeeEecCCceEecCCC-eEEEEEEEEec-CCCeeEEee
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIRT-----RRLTSS---PRFYAVPHNKICDLGD-TVRFQCSVTGQ-PAPWTSWSK 101 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~~~~~~---p~~~~~~~~~~v~~g~-~v~l~C~~~~~-p~~~v~W~~ 101 (325)
..+|+|++++.+|+|.|.|.+.+..... +.+..+ |.+...+ .....|. +++|.|.+.+. |.|.+.|++
T Consensus 69 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~ 146 (193)
T 2if7_A 69 SYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEA 146 (193)
T ss_dssp TCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEE
T ss_pred CeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEe
Confidence 5789999999999999999997765431 222232 3333332 1233465 89999999984 588999999
Q ss_pred CCeeCCCCCcEEEEecCCeEEEEEccCCCC-CCeEEEEEEEeCCeeEEEE
Q psy1095 102 DGKPATPNARVTIREKEDLRFLEISEVTLE-DAGLYTIKVENNYGSVEAT 150 (325)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~~~~~ 150 (325)
++..+... ..|.|.....+ |+|.|+|.+.|..+.....
T Consensus 147 ~g~~l~~~-----------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 147 LGNTLSSQ-----------PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp TTEEEESS-----------SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred CCEEcCCC-----------CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 98765322 13556544444 8999999999998876443
No 426
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.49 E-value=4e-14 Score=112.92 Aligned_cols=109 Identities=14% Similarity=0.241 Sum_probs=80.0
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccCC------CCeeEecCCceEecCCCeEEEEEEEEecC--CCeeEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLTS------SPRFYAVPHNKICDLGDTVRFQCSVTGQP--APWTSW 99 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~~------~p~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W 99 (325)
+|.|.+++++|+|.|.|.+.+.... .+.+.. ++.+...|....+.+|++++|.|.+.+.| .+.+.|
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W 155 (240)
T 1moe_A 76 TLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHW 155 (240)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred EEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEE
Confidence 6899999999999999999876322 122222 23355567778899999999999999876 468999
Q ss_pred eeC--CeeCC-----------------CCCcEEEEec--CCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 100 SKD--GKPAT-----------------PNARVTIREK--EDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 100 ~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
+|+ +.... ...++.+... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 156 ~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 156 VKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 995 22210 1234554432 4457899999999999999999974
No 427
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.49 E-value=3.9e-14 Score=113.48 Aligned_cols=110 Identities=14% Similarity=0.168 Sum_probs=78.5
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccCC-------------CCeeEecCCceEecCCCeEEEEEEEEecC-
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLTS-------------SPRFYAVPHNKICDLGDTVRFQCSVTGQP- 93 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~~-------------~p~~~~~~~~~~v~~g~~v~l~C~~~~~p- 93 (325)
+|.|.+++++|+|.|.|.+.+.... .+.+.. ++.+...+....+.+|++++|.|.+.+.+
T Consensus 77 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 156 (247)
T 1svz_A 77 TLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAF 156 (247)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCG
T ss_pred EEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCccc
Confidence 6899999999999999999775321 222222 23344444555699999999999998864
Q ss_pred -CCeeEEeeCC--eeC------C-----------CCCcEEEEe--cCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 94 -APWTSWSKDG--KPA------T-----------PNARVTIRE--KEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 94 -~~~v~W~~~~--~~~------~-----------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+.+.|+|++ ... . ...++.+.. .....+|.|.+++.+|+|.|+|.+.|.
T Consensus 157 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 157 TDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp GGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 5689999863 111 0 023555443 344578999999999999999999874
No 428
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.48 E-value=6e-14 Score=97.17 Aligned_cols=93 Identities=30% Similarity=0.533 Sum_probs=66.1
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+........ ...+ ..|.|.+++.+|+|.|
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~--~~~~------~~L~i~~v~~~D~G~Y 79 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPP--PQIMWFKDNETLVEDSGIVL--KDGN------RNLTIRRVRKEDEGLY 79 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC------CCEEEEESSSBCCCBTTEEE--ETTT------TEEEECSCCGGGCEEE
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCC--CeEEEEECCeEcccCCCeEE--eCCC------cEEEEeecCcccCEEE
Confidence 366666667788999999999999998887 78999999987765443221 1222 4799999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 244 TCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
+|.|.|..|.....+.|.|...+
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 80 TCQACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp EEEEC----CEEEEEEEEEEC--
T ss_pred EEEEEeCCCceEEEEEEEEeCCC
Confidence 99999999999999888885544
No 429
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.48 E-value=1.8e-14 Score=113.34 Aligned_cols=115 Identities=12% Similarity=0.165 Sum_probs=80.5
Q ss_pred CCCCcccCCCCCCCcccccccccc--------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI--------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTSW 99 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W 99 (325)
+|.|++++++|+|.|.|.+.+... ....+. .+|.+...+....+.+|+.++|.|.+.+. |.| .++|
T Consensus 82 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 161 (220)
T 1pz5_B 82 YLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKW 161 (220)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEE
Confidence 799999999999999999987531 112222 35666655544456789999999999986 888 9999
Q ss_pred eeCCeeCC--CCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 100 SKDGKPAT--PNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 100 ~~~~~~~~--~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
++++.... ...... ..+ ....|.|.+...+| |.|+|.+.|..+...+.+
T Consensus 162 ~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 162 NYGALSSGVRTVSSVL--QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp GGGTCCTTEEECCCEE--ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ecCCcccceEEcCCcc--cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 99876311 000000 111 12458898888866 999999999888655544
No 430
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.48 E-value=1.3e-12 Score=90.34 Aligned_cols=100 Identities=16% Similarity=0.220 Sum_probs=71.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCC-CCCeeEEeeCCEEeccC---CCCceEEEecCCcceeEEEEEeCCCCCCC
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPP-NDHDISWFRNNRLIKLD---SDMKPEVQVDSKENLVIARLKIPHVYPED 239 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~-~~~~~~W~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 239 (325)
.|.|...+....+.+|+.++|.|.+.+.|. ..+.+.|+|++...... ...................|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 466677777888999999999999998764 23689999987322111 11111111111112235789999999999
Q ss_pred CeEEEEEEEeCCCcEEeEEEEEEE
Q psy1095 240 EGEFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 240 ~G~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
+|.|+|.|.|..|.....+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999888874
No 431
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.48 E-value=2.7e-13 Score=93.78 Aligned_cols=95 Identities=19% Similarity=0.277 Sum_probs=73.2
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCe-eC-------CCCCcEEEEe-cCCeEEEEEccCCCCCC
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGK-PA-------TPNARVTIRE-KEDLRFLEISEVTLEDA 133 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~-~~-------~~~~~~~~~~-~~~~~~l~i~~~~~~d~ 133 (325)
..+|.+...|....+.+|++++|.|.+.+.|.+.+.|++++. .+ ....++.+.. .....+|.|.+++.+|+
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 456777788889999999999999999998889999998764 11 1233555432 33467899999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 134 GLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 134 G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
|.|+|.+.| .+.....+.|.|..+
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEECC
T ss_pred eEEEEEEEc-CCCcEEEEEEEEEcC
Confidence 999999999 777778888888764
No 432
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.48 E-value=1e-12 Score=101.38 Aligned_cols=181 Identities=17% Similarity=0.257 Sum_probs=107.4
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeC--Cee----C------C--CCCcEEEEecCCeEEEEEccCCCCCC
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKD--GKP----A------T--PNARVTIREKEDLRFLEISEVTLEDA 133 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~--~~~----~------~--~~~~~~~~~~~~~~~l~i~~~~~~d~ 133 (325)
+++.|..+.+.+|++|+|.|.+...-...+.||+. |+. | . -..||.-...+...+|+|.+++.+|.
T Consensus 4 lTQsP~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs~lq~eD~ 83 (259)
T 4f9l_D 4 LTQSPSSLSASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSATGFTLTISSLQPEDI 83 (259)
T ss_dssp EEEECSBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEccCCeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccCCeEEEEEcccChhhC
Confidence 45668888899999999999875443445899963 321 1 0 12466655556677899999999999
Q ss_pred eEEEEEEEeCCee-EEEEEEEEEECC---Ccc-------------cCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCC
Q psy1095 134 GLYTIKVENNYGS-VEATARLEIMDP---RAI-------------ISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDH 196 (325)
Q Consensus 134 G~Y~C~~~~~~~~-~~~~~~l~v~~~---~~~-------------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~ 196 (325)
+.|.|...+.... .-.-..|.|... +.. .....-+.+.....+.+|+.+.|.|.++|+.....
T Consensus 84 A~YyC~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~y 163 (259)
T 4f9l_D 84 ATYYCQQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTRY 163 (259)
T ss_dssp EEEEEEECSSSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGGS
T ss_pred EEEEEeecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCcccC
Confidence 9999986533210 000112222110 000 00011122333456889999999999998765446
Q ss_pred eeEEee--CCEEe------cc-------CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEE
Q psy1095 197 DISWFR--NNRLI------KL-------DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVA 248 (325)
Q Consensus 197 ~~~W~~--~~~~~------~~-------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 248 (325)
.+.|.| .|+.+ .. .+..+.+++...+.......|.+++++.+|.+.|.|...
T Consensus 164 ~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr~ 230 (259)
T 4f9l_D 164 YLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRE 230 (259)
T ss_dssp CEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEEe
Confidence 688987 23322 11 111111111111112234679999999999999999654
No 433
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=4.3e-13 Score=94.41 Aligned_cols=96 Identities=19% Similarity=0.300 Sum_probs=74.1
Q ss_pred ccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecC----CeEEEEEccCCCCCCeEE
Q psy1095 61 RLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKE----DLRFLEISEVTLEDAGLY 136 (325)
Q Consensus 61 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y 136 (325)
.+..||.+...+... ..+...|.|.+.|.|.|.+.|+|++..+....+....... ....|.|.+++..|+|.|
T Consensus 4 ~V~~pP~i~~~~~~~---~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 80 (118)
T 1wwc_A 4 TVYYPPRVVSLEEPE---LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNY 80 (118)
T ss_dssp CCCCCCCCCCCCCCC---CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred EEecCCceeccCCCe---eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEE
Confidence 455677765543321 2366789999999999999999999999877655443221 345799999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEECCC
Q psy1095 137 TIKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 137 ~C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
+|.+.|..|.....+.|.|...|
T Consensus 81 ~C~a~N~~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 81 TLIAKNPLGTANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEETTEEEEEEEEECCSCCC
T ss_pred EEEEECCCCeEeeEEEEEEccCC
Confidence 99999999998888888777653
No 434
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=93.55 Aligned_cols=83 Identities=19% Similarity=0.342 Sum_probs=69.3
Q ss_pred cCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEE
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEAT 150 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 150 (325)
.|....+.+|+.++|.|.+.+.| |.+.|+|++..+....++.+. ...|.|.+++..|+|.|+|.+.|..+.....
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 83 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTY 83 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEE
Confidence 35556688999999999998877 799999999988776666554 2479999999999999999999999988777
Q ss_pred EEEEEECC
Q psy1095 151 ARLEIMDP 158 (325)
Q Consensus 151 ~~l~v~~~ 158 (325)
+.|.|...
T Consensus 84 ~~l~V~~~ 91 (99)
T 2cr3_A 84 FSVNVSDA 91 (99)
T ss_dssp EEECBCSC
T ss_pred EEEEEecC
Confidence 77777654
No 435
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=4e-13 Score=93.18 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEec---CCCCCeeEEeeCCEE-eccC--CCCceEEEecCCcceeEEEEEeCCCCC
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVV---PPNDHDISWFRNNRL-IKLD--SDMKPEVQVDSKENLVIARLKIPHVYP 237 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~---~~~~~~~~W~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~ 237 (325)
.+.|...+....+.+|+.++|.|.+.+. |. +.|.|+|+... +... ...................|.|.+++.
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~--P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDK--PTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSC--CCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCC--CcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 3556666778899999999999999875 44 89999997422 2111 122211112222223467999999999
Q ss_pred CCCeEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 238 EDEGEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 238 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 999999999999999999899888854
No 436
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.47 E-value=2.4e-14 Score=113.20 Aligned_cols=122 Identities=15% Similarity=0.163 Sum_probs=77.8
Q ss_pred CCCCCcccCCCCCCCcccccccccc------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeEEe
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTSWS 100 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~ 100 (325)
.+|+|++++++|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 158 (227)
T 1mju_H 79 AYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWN 158 (227)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEG
T ss_pred EEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEe
Confidence 4789999999999999999976421 122222 34666544333346789999999999885 776 99999
Q ss_pred eCCeeCCC--CCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEEEC
Q psy1095 101 KDGKPATP--NARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEIMD 157 (325)
Q Consensus 101 ~~~~~~~~--~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 157 (325)
+++..+.. ..... ..+ ....|.|..+..+| |.|+|.+.|..........+.+..
T Consensus 159 ~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~ 217 (227)
T 1mju_H 159 SGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRG 217 (227)
T ss_dssp GGTBCTTEEECCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCC
T ss_pred cCCCcCCcEECCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCC
Confidence 99876421 11111 111 12468898888888 999999999766554444444433
No 437
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.47 E-value=7.8e-14 Score=113.70 Aligned_cols=110 Identities=15% Similarity=0.276 Sum_probs=80.2
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccCCC--------------CeeEecCCceEecCCCeEEEEEEEEecC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLTSS--------------PRFYAVPHNKICDLGDTVRFQCSVTGQP 93 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~~~--------------p~~~~~~~~~~v~~g~~v~l~C~~~~~p 93 (325)
+|.|++++++|+|.|.|.+.+.... .+.+..+ +.+...|....+.+|++++|.|.+.+.+
T Consensus 83 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~ 162 (276)
T 3auv_A 83 TLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFT 162 (276)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSC
T ss_pred EEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCcc
Confidence 6899999999999999999875321 1222222 2334556677899999999999998866
Q ss_pred --CCeeEEeeCC--eeC-----------------CCCCcEEEEec--CCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 94 --APWTSWSKDG--KPA-----------------TPNARVTIREK--EDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 94 --~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+.+.|+|++ ... ....++.+..+ ....+|.|.+++.+|+|.|+|.+.|.
T Consensus 163 ~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 163 ISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp GGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 5899999963 111 11245555442 34567999999999999999999987
No 438
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.46 E-value=1.1e-12 Score=91.12 Aligned_cols=93 Identities=20% Similarity=0.352 Sum_probs=71.6
Q ss_pred CCCCeeEecCCceEecCCCeEEEEEEEEecC--CCeeEEeeCCeeCCCCCcEEEEec-C-------CeEEEEEccCCCCC
Q psy1095 63 TSSPRFYAVPHNKICDLGDTVRFQCSVTGQP--APWTSWSKDGKPATPNARVTIREK-E-------DLRFLEISEVTLED 132 (325)
Q Consensus 63 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~~~~~~~~~~~~~~~~~~-~-------~~~~l~i~~~~~~d 132 (325)
..+|.+...|....+.+|++++|.|.+.+.| .+.+.|++++..+........... . ....|.|.+++.+|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 4688999999989999999999999998654 579999999998865432111111 0 13579999999999
Q ss_pred CeEEEEEEEeCCeeE-EEEEEEEE
Q psy1095 133 AGLYTIKVENNYGSV-EATARLEI 155 (325)
Q Consensus 133 ~G~Y~C~~~~~~~~~-~~~~~l~v 155 (325)
+|.|+|.+.|..|.. ...+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 999999999998863 45566655
No 439
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.45 E-value=8.2e-14 Score=109.58 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=79.2
Q ss_pred CCCCCcccCCCCCCCccccccccccc--------ccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CC--Cee
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAIR--------TRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA--PWT 97 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~~--------~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~--~~v 97 (325)
.+|+|++++++|+|.|.|.+.+.... .+.+. .+|.+...+ ...+.+|+.++|.|.+.+. |. +.+
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v 157 (220)
T 2fbj_H 79 LYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNV 157 (220)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEE
T ss_pred EEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEE
Confidence 47899999999999999998764321 12222 356666555 3446789999999999886 76 799
Q ss_pred EEeeCCeeCCC-CCcEEEEecCC---eEEEEEccCCCCCCeEEEEEEEeCCeeE
Q psy1095 98 SWSKDGKPATP-NARVTIREKED---LRFLEISEVTLEDAGLYTIKVENNYGSV 147 (325)
Q Consensus 98 ~W~~~~~~~~~-~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 147 (325)
.|++++..+.. ........++. ...|.|......|.|.|+|.+.|..+..
T Consensus 158 ~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~ 211 (220)
T 2fbj_H 158 TWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPV 211 (220)
T ss_dssp EESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCC
T ss_pred EEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCce
Confidence 99999876511 00001111111 1248898888899999999999987654
No 440
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=3.1e-13 Score=95.12 Aligned_cols=95 Identities=20% Similarity=0.290 Sum_probs=76.0
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... ......++ .|.|.+++.+|+|.
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~--p~i~W~k~g~~~~~~~~-~~~~~~~~-------~L~i~~v~~~D~G~ 76 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPV--PTILWRKDGVLVSTQDS-RIKQLENG-------VLQIRYAKLGDTGR 76 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSC--CEEEEEESSSBCCTTST-TEEEEETT-------EEEEESCCGGGCCC
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCC--CEEEEEECCEECcCCCC-eEEEccCC-------EEEEccCCcCCCEE
Confidence 4567777777788999999999999998888 89999999988764322 22222333 79999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
|+|.|.|..|.....+.|.|...+.
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 77 YTCIASTPSGEATWSAYIEVQEFGV 101 (118)
T ss_dssp EEEEEECSSCEEEEECCEEEECCSC
T ss_pred EEEEEEcCCCcEEEEEEEEEEeCCC
Confidence 9999999999988888888865443
No 441
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.45 E-value=4.9e-14 Score=99.92 Aligned_cols=99 Identities=21% Similarity=0.358 Sum_probs=80.6
Q ss_pred ccccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCe-eEEeeCCeeCCC--CCcEEEE--ecCC--eEEEEEccCCCC
Q psy1095 59 TRRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPW-TSWSKDGKPATP--NARVTIR--EKED--LRFLEISEVTLE 131 (325)
Q Consensus 59 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~--~~~~~~~--~~~~--~~~l~i~~~~~~ 131 (325)
.+.+..+|.|.. +....+.+|+.+.|.|.+.+.|.|. +.|++++..+.. ..++.+. .... ...|.|.+++..
T Consensus 8 ~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (122)
T 2cry_A 8 TLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRA 86 (122)
T ss_dssp CCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred EEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh
Confidence 455667898888 7788899999999999999999987 999999988865 3455552 2222 457999999999
Q ss_pred CC-eEEEEEEEeCCeeEEEEEEEEEECC
Q psy1095 132 DA-GLYTIKVENNYGSVEATARLEIMDP 158 (325)
Q Consensus 132 d~-G~Y~C~~~~~~~~~~~~~~l~v~~~ 158 (325)
|. |.|+|.+.|..|.....+.|.|...
T Consensus 87 D~~G~Y~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 87 DFQTIYNCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp HHHSCEEEEEECSSCEEEEEECCCCSCS
T ss_pred hCCceEEEEEECCCCeEEEEEEEEECCC
Confidence 99 9999999999998888877777653
No 442
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.45 E-value=2.5e-13 Score=88.95 Aligned_cols=78 Identities=14% Similarity=0.321 Sum_probs=61.2
Q ss_pred cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANEL 251 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 251 (325)
..+.+.+|+.+.|.|.+.+ |+ +.+.|+|+|..+..+..+... .++ ....|.|.+++.+|+|.|+|.|.|
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~--p~v~W~k~g~~l~~~~~~~~~--~~~----~~~~L~I~~~~~~D~G~Y~C~a~n-- 72 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PG--GPVRWYKDGERLASQGRVQLE--QAG----ARQVLRVQGARSGDAGEYLCDAPQ-- 72 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CS--TTCEEEETTEECCCCSSEEEE--ECS----SCEEEEESSCSSTTCEEEEEECTT--
T ss_pred eEEEEecCCCEEEEEEECC-CC--cEEEEEECCEEccccccEEEe--ecC----CeEEEEecCCCCcccEEEEEEECC--
Confidence 3567889999999999865 66 789999999999877655443 344 346899999999999999998844
Q ss_pred CcEEeEEEEEE
Q psy1095 252 GEVVTSACLIV 262 (325)
Q Consensus 252 ~~~~~~~~l~v 262 (325)
....+.|.|
T Consensus 73 --~~~~a~l~V 81 (84)
T 2lu7_A 73 --DSRIFLVSV 81 (84)
T ss_dssp --TCEEEEEEE
T ss_pred --EEEEEEEEE
Confidence 455666766
No 443
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.44 E-value=1.2e-12 Score=92.63 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=67.8
Q ss_pred EecCC-ceEecCCCeEEEEEEEEec--CCCeeEEeeCCeeCCC-----CCcEEEEec---CCeEEEEEccCCCCCCeEEE
Q psy1095 69 YAVPH-NKICDLGDTVRFQCSVTGQ--PAPWTSWSKDGKPATP-----NARVTIREK---EDLRFLEISEVTLEDAGLYT 137 (325)
Q Consensus 69 ~~~~~-~~~v~~g~~v~l~C~~~~~--p~~~v~W~~~~~~~~~-----~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~ 137 (325)
.+.|. ...+.+|+++.|.|.+.+. |.+.+.|++++..+.. ......... ....+|.|.+++.+|+|.|+
T Consensus 11 ~i~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 90 (122)
T 3s35_X 11 VLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYT 90 (122)
T ss_dssp EEESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEE
T ss_pred EEcCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEE
Confidence 33444 4578899999999999984 4568899998874321 111111111 12357999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEECCCc
Q psy1095 138 IKVENNYGSVEATARLEIMDPRA 160 (325)
Q Consensus 138 C~~~~~~~~~~~~~~l~v~~~~~ 160 (325)
|.+.|..|.....+.|.|...|.
T Consensus 91 C~a~n~~g~~~~~~~l~V~~~p~ 113 (122)
T 3s35_X 91 CAASSGLMTKKNSTFVRVHEKPF 113 (122)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEC
T ss_pred EEEccCCCceEEEEEEEEeccCe
Confidence 99999999888899999987643
No 444
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.44 E-value=1.6e-12 Score=86.80 Aligned_cols=82 Identities=17% Similarity=0.352 Sum_probs=66.7
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
++.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... ..|.|.+++.+|+|.|
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~---------------~~L~i~~v~~~d~G~Y 65 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPI--PHYQWFKNELPLTHETK---------------KLYMVPYVDLEHQGTY 65 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSC--CEEEEEETTEECTTCCS---------------SEEEESSCCGGGCEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCC--CEEEEEcCCeeCCcCCC---------------CeEEECCCCHHhCEEE
Confidence 355666666778899999999999999888 89999999988764432 3799999999999999
Q ss_pred EEEEEeCCCcEE-eEEEEEE
Q psy1095 244 TCRVANELGEVV-TSACLIV 262 (325)
Q Consensus 244 ~C~~~~~~~~~~-~~~~l~v 262 (325)
+|.+.|..|... ..+.|.|
T Consensus 66 ~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 66 WCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp EEEEECSSCEEECCCEEEEE
T ss_pred EEEEEcCCCCEEeeeEEEEE
Confidence 999999998654 3455555
No 445
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.44 E-value=6e-14 Score=111.34 Aligned_cols=112 Identities=11% Similarity=0.137 Sum_probs=68.2
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccC---CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeEEeeC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLT---SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTSWSKD 102 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~~~ 102 (325)
+|.|.+++++|+|.|.|.+.+.... ...+. .+|.+...+....+.+|+.++|.|.+.+. |.+ .++|+|+
T Consensus 94 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 173 (233)
T 3bqu_C 94 VFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKID 173 (233)
T ss_dssp EEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC
T ss_pred EEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEEC
Confidence 6899999999999999999775431 12222 26777665544444579999999999884 443 7999999
Q ss_pred CeeCCCCCcEEE--Ee-cCC----eEEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 103 GKPATPNARVTI--RE-KED----LRFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 103 ~~~~~~~~~~~~--~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
+..+........ .. .++ ...|.|..+..+|.|.|+|.+.|...
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 174 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp -----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 987764411110 01 111 23588888888999999999988643
No 446
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.43 E-value=3.6e-13 Score=91.80 Aligned_cols=83 Identities=24% Similarity=0.394 Sum_probs=65.6
Q ss_pred CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
...+.+|+.+.|.|.+.+.|. +.+.|++++..+.............+ ...|.|.+++.+|+|.|+|.|.|..|
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~--p~v~W~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~N~~g 89 (100)
T 3caf_A 17 LHAVPAANTVKFRCPAGGNPM--PTMRWLKNGKEFKQEHRIGGYKVRNQ-----HWSLIMESVVPSDKGNYTCVVENEYG 89 (100)
T ss_dssp EEEECTTCCEEEECCEEEESC--CEEEEEETTEECCGGGSTTCCEEEGG-----GTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred EEEecCCCEEEEEEEccccCC--CEEEEEECCEEcccccccccEEEecC-----eEEEEEccCCcCCCEEEEEEEEeCCC
Confidence 456788999999999999988 88999999998865443221111111 14799999999999999999999999
Q ss_pred cEEeEEEEEE
Q psy1095 253 EVVTSACLIV 262 (325)
Q Consensus 253 ~~~~~~~l~v 262 (325)
.....+.|.|
T Consensus 90 ~~~~~~~l~V 99 (100)
T 3caf_A 90 SINHTYHLDV 99 (100)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9888877766
No 447
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.43 E-value=2.8e-13 Score=107.43 Aligned_cols=122 Identities=11% Similarity=0.155 Sum_probs=76.4
Q ss_pred CCCCcccCCCCCCCcccccc--cc--c-------ccccccC----CCCeeEecCCceEecCC-CeEEEEEEEEec-CCC-
Q psy1095 34 STPPRSISPLSSRTFTPYSL--NS--A-------IRTRRLT----SSPRFYAVPHNKICDLG-DTVRFQCSVTGQ-PAP- 95 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~--~~--~-------~~~~~~~----~~p~~~~~~~~~~v~~g-~~v~l~C~~~~~-p~~- 95 (325)
+|+|++++++|+|.|.|.+. +. . ...+.+. .+|.+........+.+| +.++|.|.+.+. |.+
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~ 158 (232)
T 1dn0_B 79 SLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSI 158 (232)
T ss_dssp EEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCC
T ss_pred EEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCe
Confidence 78999999999999999987 32 1 1112222 24555432222234578 999999999885 776
Q ss_pred eeEEee-CCeeCCCCCcE-EEEecCC---eEEEEEccCCC--CCCeEEEEEEEeCCeeEEEEEEEEE
Q psy1095 96 WTSWSK-DGKPATPNARV-TIREKED---LRFLEISEVTL--EDAGLYTIKVENNYGSVEATARLEI 155 (325)
Q Consensus 96 ~v~W~~-~~~~~~~~~~~-~~~~~~~---~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~~~~~l~v 155 (325)
.++|++ ++..+.....+ .....+. ...|.|..... +|.|.|+|.+.|..+.......+.+
T Consensus 159 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 159 TFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp EEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred EEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 999999 88876540000 0001111 23588888876 7899999999998876655554443
No 448
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.43 E-value=4.4e-13 Score=89.18 Aligned_cols=73 Identities=19% Similarity=0.427 Sum_probs=56.7
Q ss_pred EecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEE
Q psy1095 176 CCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVV 255 (325)
Q Consensus 176 v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 255 (325)
+.+|+.+.|.|.+.+ |+ +.+.|+|+|..+..+..+... .++ ....|.|.+++.+|+|.|+|.|.| ..
T Consensus 18 ~~~g~~v~l~C~v~~-p~--~~v~W~k~g~~i~~~~~~~i~--~~~----~~~~L~I~~v~~~D~G~Y~C~a~n----~~ 84 (91)
T 2lvc_A 18 AITSECVMLACEVDR-ED--APVRWYKDGQEVEESDFVVLE--NEG----PHRRLVLPATQPSDGGEFQCVAGD----EC 84 (91)
T ss_dssp CCTTCCEEEEEECSC-TT--SCCEEEETTSCCCCCSSCEEE--EET----TEEEEEESSCCGGGCSEEEEECSS----CE
T ss_pred EECCCcEEEEEEECC-CC--cEEEEEECCEEeeeeeeeeEE--ecC----CeEEEEeCCCChhhcEEEEEEEcc----eE
Confidence 457999999999855 65 789999999999877665543 444 346899999999999999999855 34
Q ss_pred eEEEEE
Q psy1095 256 TSACLI 261 (325)
Q Consensus 256 ~~~~l~ 261 (325)
.++.|.
T Consensus 85 ~~~~lt 90 (91)
T 2lvc_A 85 AYFTVT 90 (91)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455554
No 449
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.43 E-value=7.4e-13 Score=89.27 Aligned_cols=87 Identities=18% Similarity=0.327 Sum_probs=70.0
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+....+... .. ..|.|.+++.+|+|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p---p~i~W~k~g~~~~~~~~~~~---~~-------~~L~i~~~~~~D~G~ 74 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV---QSINWLRDGVQLVESNRTRI---TG-------EEVEVRDSIPADSGL 74 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC---CEEEEEBTTBCCCCCSSEEE---CS-------SEEEESSCCGGGSEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC---CceEEEECCEecCCCCCEEE---eC-------CEEEECCCChHHCEE
Confidence 346666666778899999999999999874 58999999988765443221 12 489999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEE
Q psy1095 243 FTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v 262 (325)
|+|.|.|..|.....+.|.|
T Consensus 75 Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 75 YACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEeccCCCcEEEEEEEEE
Confidence 99999999998888777765
No 450
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.43 E-value=9e-13 Score=89.42 Aligned_cols=88 Identities=22% Similarity=0.298 Sum_probs=66.7
Q ss_pred CCCeeEe-cCCceEecCCCeEEEEEEEE-ecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEE
Q psy1095 64 SSPRFYA-VPHNKICDLGDTVRFQCSVT-GQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVE 141 (325)
Q Consensus 64 ~~p~~~~-~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 141 (325)
.+|.+.. .+....+.+|+++.|.|.+. +.|.+.+.|+|++........ .... ..|.|.+++.+|+|.|+|.+.
T Consensus 8 ~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~--~~~~---~~L~i~~v~~~D~G~Y~C~a~ 82 (98)
T 1gl4_B 8 KPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRA--MDFN---GILTIRNVQPSDAGTYVCTGS 82 (98)
T ss_dssp -CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTE--EEET---TEEEECSCCGGGCEEEEEEEE
T ss_pred CCcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCcee--ecCC---CEEEEeCCChhhCEEEEEEec
Confidence 3444444 34566899999999999998 589999999997554433321 1222 269999999999999999999
Q ss_pred eCCeeEEEEEEEEEE
Q psy1095 142 NNYGSVEATARLEIM 156 (325)
Q Consensus 142 ~~~~~~~~~~~l~v~ 156 (325)
|..|.....+.|.|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 83 NMFAMDQGTATLHVQ 97 (98)
T ss_dssp CSSCEEEEEEEEEEC
T ss_pred CCCCccccEEEEEEe
Confidence 999988877777764
No 451
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.43 E-value=1.3e-12 Score=89.45 Aligned_cols=87 Identities=14% Similarity=0.182 Sum_probs=67.6
Q ss_pred ecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe
Q psy1095 177 CDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT 256 (325)
Q Consensus 177 ~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 256 (325)
..++.+.|.|.+.|.|. +.+.|++++..+..+.......... ......+.|.|.+++.+|+|.|+|.|.|..|....
T Consensus 14 ~~~~~~~~~c~v~G~P~--P~i~W~k~g~~l~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 90 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPK--PALQWFYNGAILNESKYICTKIHVT-NHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEK 90 (103)
T ss_dssp CCCCEEEEEEEEECSSC--CEEEEEETTEEECCCSSEEEEEEEE-CSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred eECcEEEEEEEEEEeCC--CEEEEEECCEECCCCCcEeEEEEec-CCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeE
Confidence 35788999999999998 8999999999987664322221111 12224567999999999999999999999999999
Q ss_pred EEEEEEEeeC
Q psy1095 257 SACLIVDVVK 266 (325)
Q Consensus 257 ~~~l~v~~~~ 266 (325)
++.|.|...+
T Consensus 91 ~~~l~V~~~P 100 (103)
T 1wwb_X 91 QISAHFMGWP 100 (103)
T ss_dssp EEEECCSCCC
T ss_pred EEEEEECCCC
Confidence 8888874433
No 452
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.43 E-value=8.6e-14 Score=110.10 Aligned_cols=116 Identities=15% Similarity=0.158 Sum_probs=76.7
Q ss_pred CCCCCcccCCCCCCCcccccccccc--------------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-C
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI--------------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-P 93 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~--------------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p 93 (325)
.+|.|++++++|+|.|.|.+.+..+ ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P 159 (228)
T 3bae_H 80 VFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFP 159 (228)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBS
T ss_pred EEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeC
Confidence 4789999999999999999976531 112222 35666554433446789999999999885 8
Q ss_pred CC-eeEEeeCCeeCCCCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 94 AP-WTSWSKDGKPATPNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 94 ~~-~v~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
.+ .+.|++++..+.......+...+ ....|.|.....+| |.|+|.+.|..+....
T Consensus 160 ~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 160 EPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp SCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred CCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 77 99999988754211111111111 12358888888766 9999999998775443
No 453
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.43 E-value=1.2e-13 Score=103.99 Aligned_cols=136 Identities=17% Similarity=0.209 Sum_probs=85.0
Q ss_pred CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCC--------CceEEEecCCcceeEEEEEeCCCCCCCCeEEE
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSD--------MKPEVQVDSKENLVIARLKIPHVYPEDEGEFT 244 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 244 (325)
...+.+|+.|+|.|.+. .|. +.+.|++++..+..-.. +..+..... ....|.|.+++.+|+|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~--~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~----~~~sL~I~~v~~~DsG~Y~ 76 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPL--KEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDT----VSGSLTIYNLTSSDEDEYE 76 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCC--SCEEEEETTEEEEEEETTEEEECGGGTTSEEECT----TTCCEEECSCCGGGCEEEE
T ss_pred EEEEEcCCCEEEcCCCC-CCc--ceEEEEeCCcEEEEEcCCCcccccccCCcEEEeC----CCCeEEECCCChhhCceEE
Confidence 34677899999999884 344 89999998865421100 010111110 1258999999999999999
Q ss_pred EEEEeCCCcEEeEEEEEEEeeCCe-ecC-------------CCCceE-EEEeCCE-------EEEEEcCCCCCCCeEEEE
Q psy1095 245 CRVANELGEVVTSACLIVDVVKGK-DLT-------------SDGRLN-IITVGGT-------SVLTIEDITGDDSGKYQV 302 (325)
Q Consensus 245 C~~~~~~~~~~~~~~l~v~~~~~~-~~~-------------~~~~~~-~~~~~~~-------~~l~i~~v~~~d~G~Y~C 302 (325)
|.+.+..+ ...+.|.|...... .+. ...... .+..++. ..|.+. ...|.|.|+|
T Consensus 77 C~~~n~~~--~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~--~~~~~g~Y~C 152 (171)
T 1ccz_A 77 MESPNITD--TMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQ--WTNLRAPFKC 152 (171)
T ss_dssp EECTTCCS--CEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEE--CSCCSSCEEE
T ss_pred EEEeCCCC--cEEEEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEe--ccCCCceEEE
Confidence 99998877 45566766443221 110 111111 1222332 123333 3678999999
Q ss_pred EEECCCeeEEeEEEEEE
Q psy1095 303 HVSNQHGSDSCYASVAV 319 (325)
Q Consensus 303 ~a~n~~g~~~~~~~l~V 319 (325)
.|.|..|..+..+.|..
T Consensus 153 ~a~N~~~~~~~~~~l~c 169 (171)
T 1ccz_A 153 KAVNRVSQESEMEVVNC 169 (171)
T ss_dssp EEEETTEEEEEEECCCC
T ss_pred EEEcccCcccceeEEeC
Confidence 99999999888776643
No 454
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=4.6e-13 Score=96.58 Aligned_cols=83 Identities=17% Similarity=0.328 Sum_probs=64.9
Q ss_pred cCeeEecCCcEEEEEEEEecCCCCCeeEEeeCC----------------------------EEec-cCCCCceEEEecCC
Q psy1095 172 ENLRCCDGDSVTFECQVQVVPPNDHDISWFRNN----------------------------RLIK-LDSDMKPEVQVDSK 222 (325)
Q Consensus 172 ~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~----------------------------~~~~-~~~~~~~~~~~~~~ 222 (325)
....+.+|+.+.|.|.+.|.|. |.+.|++++ ..+. ...+... ...+
T Consensus 26 ~~~~v~~G~~v~L~C~~~G~P~--P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i--~~~~- 100 (139)
T 1gxe_A 26 DTIVVVAGNKLRLDVPISGDPA--PTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRV--ETTK- 100 (139)
T ss_dssp CEEEESSSSCCCCEEECCSBSC--CEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEE--EEET-
T ss_pred CCEEEeCCCeEEEEEEEEEcCC--CeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEE--EeCC-
Confidence 4567889999999999999998 899999988 3321 1122211 1222
Q ss_pred cceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEE
Q psy1095 223 ENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 223 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
..+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 101 ---~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 101 ---DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp ---TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ---CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 2468999999999999999999999999888888877
No 455
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=9.9e-13 Score=90.10 Aligned_cols=92 Identities=25% Similarity=0.364 Sum_probs=69.6
Q ss_pred CeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEE
Q psy1095 165 PKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFT 244 (325)
Q Consensus 165 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 244 (325)
+.+...+....+.+|+.+.|.|.+.+ ++ +.+.|++++..+......+.....++ ....|.|.+++.+|+|.|+
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~~~~-~~--~~v~W~k~g~~l~~~~~~~~~~~~~~----~~~~L~I~~~~~~D~G~Y~ 80 (103)
T 1x44_A 8 IMVTKQLEDTTAYCGERVELECEVSE-DD--ANVKWFKNGEEIIPGPKSRYRIRVEG----KKHILIIEGATKADAAEYS 80 (103)
T ss_dssp CCCSBCCCCEEEETTEEEEEEEECSS-SS--CCCEEEETTEECCCSTTCSEEEEEET----TEEEEEEEEECTTTCSEEE
T ss_pred ceeeccCCCEEEECCCCEEEEEEecC-CC--CeEEEEECCEECCCCCceEEEEEEcC----CEEEEEECCCCcccCEEEE
Confidence 33566667788999999999999976 55 78999999999876663322322333 3468999999999999999
Q ss_pred EEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 245 CRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 245 C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
|.|.| ....+.|.|...+.
T Consensus 81 C~a~n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 81 VMTTG----GQSSAKLSVDLKSG 99 (103)
T ss_dssp EEETT----EEEEEEEEEECCCS
T ss_pred EEECC----CcEEEEEEEeCCCC
Confidence 99976 46677777755443
No 456
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.42 E-value=2.1e-14 Score=115.41 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=80.0
Q ss_pred CCCCcccCCCCCCCccccccccccc------ccccC---CCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-eeEEeeC
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAIR------TRRLT---SSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WTSWSKD 102 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~~------~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~~~ 102 (325)
+|.|.+++++|+|.|.|.+.+.... ...+. .+|.+...+....+.+|+.++|.|.+.+ .|.+ .++|+++
T Consensus 110 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 189 (252)
T 3bkj_L 110 TLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKID 189 (252)
T ss_dssp EEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEEC
Confidence 7899999999999999999776431 12222 3577766554444457999999999988 4554 7999999
Q ss_pred CeeCCCCCcEE--EE-ecCC----eEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 103 GKPATPNARVT--IR-EKED----LRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 103 ~~~~~~~~~~~--~~-~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
+..+....... .. ..++ ...|.|.++..+|+|.|+|.+.|....
T Consensus 190 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 190 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp TEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 99876441111 00 1111 235899999999999999999987643
No 457
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.42 E-value=2.1e-13 Score=110.30 Aligned_cols=111 Identities=13% Similarity=0.223 Sum_probs=78.1
Q ss_pred CCCCCcccCCCCCCCcccccccccc------cccccCCC------------------Cee-EecCCceEecCCCeEEEEE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI------RTRRLTSS------------------PRF-YAVPHNKICDLGDTVRFQC 87 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~~~~------------------p~~-~~~~~~~~v~~g~~v~l~C 87 (325)
.+|.|.+++++|+|.|.|.+.+... ..+.+..+ |.+ ...+....+.+|++++|.|
T Consensus 81 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C 160 (264)
T 2gjj_A 81 FTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISC 160 (264)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEE
Confidence 3789999999999999999977532 11233232 222 3334445789999999999
Q ss_pred EEEecCC--CeeEEeeCC--ee---CC----C----------CCcEEEEe--cCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 88 SVTGQPA--PWTSWSKDG--KP---AT----P----------NARVTIRE--KEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 88 ~~~~~p~--~~v~W~~~~--~~---~~----~----------~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+.+.+. +.+.|+++. .. +. . ..++.+.. .....+|.|.+++.+|+|.|+|.+.|.
T Consensus 161 ~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 161 KASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 9988763 789999863 21 10 0 23444432 234678999999999999999999885
No 458
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.42 E-value=1.1e-12 Score=91.92 Aligned_cols=88 Identities=16% Similarity=0.160 Sum_probs=68.5
Q ss_pred cCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEec-CCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEe
Q psy1095 178 DGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVD-SKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVT 256 (325)
Q Consensus 178 ~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 256 (325)
.+..+.|.|.+.|+|. +.++|+|+|..+..+.......... .+.....+.|.|.+++..|+|.|+|.|.|..|....
T Consensus 14 ~~~~~~l~c~v~G~P~--P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPA--PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCEEEEEEEECCSSC--CEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCccEEEEEEEeeeCC--CeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 5778999999999999 9999999999998765543332211 011113468999999999999999999999999988
Q ss_pred EEEEEEEeeCC
Q psy1095 257 SACLIVDVVKG 267 (325)
Q Consensus 257 ~~~l~v~~~~~ 267 (325)
++.|.|...+.
T Consensus 92 t~~l~v~~~P~ 102 (126)
T 1he7_A 92 SIMAAFMDNPF 102 (126)
T ss_dssp EEEECCCSCTT
T ss_pred EEEEEEEcCCC
Confidence 88888754443
No 459
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.42 E-value=2.2e-13 Score=110.52 Aligned_cols=110 Identities=15% Similarity=0.282 Sum_probs=76.9
Q ss_pred CCCCcccCCCCCCCcccccccccc------cccccCCC---------C--------------eeEecCCceEecCCCeEE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI------RTRRLTSS---------P--------------RFYAVPHNKICDLGDTVR 84 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~------~~~~~~~~---------p--------------~~~~~~~~~~v~~g~~v~ 84 (325)
+|.|.+++++|+|.|.|.+.+... ..+.+..+ | .....|....+.+|++++
T Consensus 91 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~ 170 (268)
T 1x9q_A 91 TLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMK 170 (268)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEE
T ss_pred EEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEE
Confidence 689999999999999999977532 11222221 1 123445567899999999
Q ss_pred EEEEEEecC--CCeeEEeeCC--eeC-------------------CCCCcEEEEec--CCeEEEEEccCCCCCCeEEEEE
Q psy1095 85 FQCSVTGQP--APWTSWSKDG--KPA-------------------TPNARVTIREK--EDLRFLEISEVTLEDAGLYTIK 139 (325)
Q Consensus 85 l~C~~~~~p--~~~v~W~~~~--~~~-------------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~ 139 (325)
|.|.+.+.+ .+.+.|+++. ..+ ....++.+..+ ....+|.|.+++.+|+|.|+|.
T Consensus 171 L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 250 (268)
T 1x9q_A 171 LSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCT 250 (268)
T ss_dssp EEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEE
Confidence 999998765 3789999852 211 12245555432 2356799999999999999999
Q ss_pred EEeC
Q psy1095 140 VENN 143 (325)
Q Consensus 140 ~~~~ 143 (325)
+.+.
T Consensus 251 a~~~ 254 (268)
T 1x9q_A 251 GASY 254 (268)
T ss_dssp EEET
T ss_pred EccC
Confidence 9764
No 460
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.42 E-value=6.4e-12 Score=112.23 Aligned_cols=171 Identities=16% Similarity=0.170 Sum_probs=107.1
Q ss_pred ecCCCeEEEEEEEEecCC----CeeEEeeCCeeCCCCCcE-EEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCee-
Q psy1095 77 CDLGDTVRFQCSVTGQPA----PWTSWSKDGKPATPNARV-TIREKED----LRFLEISEVTLEDAGLYTIKVENNYGS- 146 (325)
Q Consensus 77 v~~g~~v~l~C~~~~~p~----~~v~W~~~~~~~~~~~~~-~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~- 146 (325)
+..+.+..|.|.+.+... ..|+|++++..+...... .....++ ...|.|......|.+.|+|++.+....
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~ 434 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 434 (551)
T ss_pred eeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCC
Confidence 556788999999988543 579999998765422110 0111111 234777777777889999999876552
Q ss_pred -EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcce
Q psy1095 147 -VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENL 225 (325)
Q Consensus 147 -~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (325)
..+.+.+.+.. ..+|.+........+..|+.++|.|.+.++.+....|.|+++|..+......... ...+..+.
T Consensus 435 ~~~~~~~~~~~~----~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~-~~~dgty~ 509 (551)
T 1ntl_A 435 PIEKTISKTKGR----PKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPI-MNTNGSYF 509 (551)
T ss_pred CeEEEEecCCCC----CcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccce-eCCCCCEE
Confidence 22333333221 1235544433333345689999999999977765799999999987522111111 11122334
Q ss_pred eEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 226 VIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 226 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
..+.|.+......+.+.|+|.|.+...
T Consensus 510 ~~s~l~v~~~~~~~~~~ytC~V~h~~l 536 (551)
T 1ntl_A 510 VYSKLNVQKSNWEAGNTFTCSVLHEGL 536 (551)
T ss_pred EEEEEEEcHHHcCCCCeEEEEEEECCC
Confidence 446677776666678899999988654
No 461
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.42 E-value=7.2e-14 Score=112.81 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=79.9
Q ss_pred CCCCCCcccCCCCCCCccccccccccc--------ccccCC-----------------CCeeEecCCceEecCCCeEEEE
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSAIR--------TRRLTS-----------------SPRFYAVPHNKICDLGDTVRFQ 86 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~~~--------~~~~~~-----------------~p~~~~~~~~~~v~~g~~v~l~ 86 (325)
..+|.|++++++|+|.|.|.+.+.... .+.+.. +|.+...|....+.+|++++|.
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 157 (259)
T 3omz_A 78 NLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLN 157 (259)
T ss_dssp CCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEEC
T ss_pred eEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEE
Confidence 346899999999999999999765321 112222 3567777888889999999999
Q ss_pred EEEEec-CCCeeEEeeCCe--eC------------CCCCcEEEE--ecCCeEEEEEccCCCCCCeEEEEEEEe
Q psy1095 87 CSVTGQ-PAPWTSWSKDGK--PA------------TPNARVTIR--EKEDLRFLEISEVTLEDAGLYTIKVEN 142 (325)
Q Consensus 87 C~~~~~-p~~~v~W~~~~~--~~------------~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 142 (325)
|.+.+. +.+.+.|+|... .+ ....++.+. .......|.|.+++.+|+|.|+|.+..
T Consensus 158 C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 158 CLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred EECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 998774 788999998431 10 001344433 122345699999999999999999974
No 462
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.41 E-value=1e-12 Score=88.61 Aligned_cols=83 Identities=27% Similarity=0.478 Sum_probs=69.0
Q ss_pred ecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEE
Q psy1095 70 AVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEA 149 (325)
Q Consensus 70 ~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 149 (325)
..|....+.+|+++.|.|.+.+ .|.+.|++++..+....++.... ..|.|.+++.+|+|.|+|.+.|..|....
T Consensus 6 ~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 79 (95)
T 4hwu_A 6 SQPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIG----EYLQIKGATPRDSGLYACTAARTVDSETW 79 (95)
T ss_dssp --CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEET----TEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cCCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeC----CEEEECcCCcccCEEEEEEEccCCCcEEE
Confidence 3566677999999999999876 57899999999998777666542 36999999999999999999999998888
Q ss_pred EEEEEEECC
Q psy1095 150 TARLEIMDP 158 (325)
Q Consensus 150 ~~~l~v~~~ 158 (325)
.+.|.|..+
T Consensus 80 ~~~l~V~~~ 88 (95)
T 4hwu_A 80 IFMVNVTDA 88 (95)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 888888764
No 463
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.41 E-value=4.1e-14 Score=107.53 Aligned_cols=102 Identities=11% Similarity=0.051 Sum_probs=71.0
Q ss_pred CCCCCCCCcccCCCCCCCccccccccccc----ccccCC---CCeeEecCCceEecCCCeEEEEEEE-EecCCCeeEEee
Q psy1095 30 STPRSTPPRSISPLSSRTFTPYSLNSAIR----TRRLTS---SPRFYAVPHNKICDLGDTVRFQCSV-TGQPAPWTSWSK 101 (325)
Q Consensus 30 ~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~----~~~~~~---~p~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~~ 101 (325)
....+|+|++++.+|+|.|.|.+.+.... .+.+.. .|.+. ..+++++|.|.+ .+ |.|.+.|++
T Consensus 66 ~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~L~V~~~~~~P~i~--------~~~~~v~L~C~~~~g-p~p~i~W~~ 136 (180)
T 2dru_A 66 KTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYEMVSKPMIY--------WECSNATLTCEVLEG-TDVELKLYQ 136 (180)
T ss_dssp TTTCCEEECSCCGGGCEEEEEEEESSSEEEEEEEEEEECCCCCCEEE--------EEGGGTEEEEECSSC-TTCEEEEEE
T ss_pred CCCccEEEcCCCHHHCeEEEEEEEcCCeEEEEEEEEEECCCCCCEEE--------ecCCCEEEEEEeCCC-CCCEEEEEE
Confidence 34578999999999999999997665411 112211 22322 234679999999 66 899999999
Q ss_pred CCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEE
Q psy1095 102 DGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATA 151 (325)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 151 (325)
++..+.. .. ..+|.+.. .+|+|.|+|.+.|..+......
T Consensus 137 ~~~~l~~-------~~--~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~ 175 (180)
T 2dru_A 137 GKEHLRS-------LR--QKTMSYQW--TNLRAPFKCKAVNRVSQESEME 175 (180)
T ss_dssp TTEEEEE-------ES--SSEEEEEC--SCCSSCEEEEEEETTEEEEEEE
T ss_pred CCeECcC-------CC--CCEEEEEE--hhcCccEEEEEecCcCccccce
Confidence 9987641 11 12455532 7899999999999988665443
No 464
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=7.9e-13 Score=90.66 Aligned_cols=92 Identities=20% Similarity=0.320 Sum_probs=71.2
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEE
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEF 243 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 243 (325)
++.|...+....+.+|+.+.|.|.+.+.+.+ +.+.|++++..+..+.++... .++ ....|.|.+++.+|+|.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~-~~v~W~k~g~~i~~~~r~~~~--~~~----~~~~L~I~~v~~~D~G~Y 80 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESAS-DPAMWTVGGKTVGSSSRFQAT--RQG----RKYILVVREAAPSDAGEV 80 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCS-SCBCCBSSSSBCSBCSSCEEE--EET----TEEEEEECSCCTTTCSCE
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCC-ceeEEEECCEECCCCCCEEEE--EcC----CEEEEEECCCCHHHCEEE
Confidence 4566666778899999999999999877642 579999999988776655433 333 346899999999999999
Q ss_pred EEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 244 TCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 244 ~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
+|.+ ++...++.|.|...+
T Consensus 81 ~C~a----~~~~~~a~L~V~~~p 99 (104)
T 2eny_A 81 VFSV----RGLTSKASLIVRERS 99 (104)
T ss_dssp EEEE----TTEEEEECEEEECCC
T ss_pred EEEE----CCeeEEEEEEEeCCC
Confidence 9988 445677788885443
No 465
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.41 E-value=9.3e-13 Score=111.50 Aligned_cols=104 Identities=16% Similarity=0.226 Sum_probs=68.2
Q ss_pred cCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCC----CcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 71 VPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPN----ARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 71 ~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
.+....+.+|+++.|.|.+.| |.|.++|++++..+... .++.+ .. .+|.|.+++.+|+|.|+|.+.|..|.
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~---~~L~I~~v~~~D~G~Y~C~a~N~~g~ 326 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RN---GDLFFKKVQVEDGGVYTCYAMGETFN 326 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ET---TEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ec---CeEEEeecCcccCEEEEEEEecCCCc
Confidence 345668999999999999998 99999999977654322 24555 22 35999999999999999999999998
Q ss_pred EEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCee
Q psy1095 147 VEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDI 198 (325)
Q Consensus 147 ~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~ 198 (325)
....+.|.|... + .+|+.+.|.|.+.|.|+ |.+
T Consensus 327 ~~~~~~l~V~~~------~-----------~~g~~~~l~C~~~g~P~--P~i 359 (361)
T 2xot_A 327 ETLSVELKVYNF------T-----------LHGHHDTLNAAADPWSH--PQF 359 (361)
T ss_dssp EEEEEEEEEESS------C-----------CC--------------------
T ss_pred cEEEEEEEEEee------e-----------ccCCceEEEEEeCCCCC--Ccc
Confidence 888888888543 1 45789999999999987 554
No 466
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.41 E-value=1.7e-11 Score=92.05 Aligned_cols=167 Identities=15% Similarity=0.231 Sum_probs=108.3
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCe-eEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCC
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPW-TSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNY 144 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 144 (325)
..+.+.|....|..|+++.|+|.+.. +.+. +.|-.. +. +.......+-..|.|.+++ |.|.|.|.+....
T Consensus 3 f~v~v~P~~~~V~~G~S~~l~Cs~~c-~~p~~~glet~---l~---~~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~ 73 (192)
T 1zxq_A 3 FEVHVRPKKLAVEPKGSLEVNCSTTC-NQPEVGGLETS---LN---KILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSG 73 (192)
T ss_dssp CCEEEESSEEEECTTEEEEEEEEESC-SSCSEEEEECS---SE---EEEEEEETTEEEEEEEEEC--SCEEEEEEEEETT
T ss_pred cEEEEeCCCcEEeCCCcEEEEEECCC-CCccccccccc---cC---ceEEcCCCCeEEEEEeccc--cCCeeEEEEECCC
Confidence 45667788888999999999999853 4444 345421 11 1122222344569999998 7889999998876
Q ss_pred eeEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEe-cCCCCCeeEEeeCCEEeccCCCCceEEEecCCc
Q psy1095 145 GSVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQV-VPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKE 223 (325)
Q Consensus 145 ~~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 223 (325)
....+.+.|.|+..|. .+.+.. .+..+.+|+.++|.|.+.+ .|.....+.|++++..+......... ...
T Consensus 74 ~~~~~~~~itVy~~P~---~v~i~~--~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~--~~~-- 144 (192)
T 1zxq_A 74 KQESMNSNVSVYQPPR---QVILTL--QPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAA--PAP-- 144 (192)
T ss_dssp EEEEEEEEEEECBCCC---CCEEEE--ESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSST--TCT--
T ss_pred cceEEEEEEEEEeCCC---CceEcc--CCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeeccccccc--CcC--
Confidence 7778889999988643 233332 2346889999999999985 45433568999999887532110000 000
Q ss_pred ceeEEEEEeCCCCCCCCe-EEEEEEEeCC
Q psy1095 224 NLVIARLKIPHVYPEDEG-EFTCRVANEL 251 (325)
Q Consensus 224 ~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~ 251 (325)
......+.+. ++++|.| .|+|.|.-..
T Consensus 145 ~~~tv~~~~~-~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 145 QEATATFNST-ADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp TCEEEEEEEE-CCGGGGGCEEEEEEEEEC
T ss_pred cceEEEEEEe-cchhhCCceEEEEEEecC
Confidence 0112234444 4555666 9999998765
No 467
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.40 E-value=3.7e-13 Score=105.90 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=76.1
Q ss_pred CCCCcccCCCCCCCcccccccccc-------ccccc----CCCCeeE-ecCCceEecCCCeEEEEEEEEe-cCC--CeeE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI-------RTRRL----TSSPRFY-AVPHNKICDLGDTVRFQCSVTG-QPA--PWTS 98 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~-------~~~~~----~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~-~p~--~~v~ 98 (325)
+|.|++++++|+|.|.|.+.+... ....+ ..+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.
T Consensus 82 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~ 159 (221)
T 3m8o_H 82 FLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVT 159 (221)
T ss_dssp EEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEE
T ss_pred EEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEE
Confidence 589999999999999999876531 11122 2355555 333333 78999999999988 676 4899
Q ss_pred EeeCCeeCC----------CCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 99 WSKDGKPAT----------PNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 99 W~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
|++++..+. ....+... ..|.|......|.|.|+|.+.+..+.
T Consensus 160 W~~~g~~~~~~~~~~~~~~~~~~~~~~-----s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 160 WSESGQGVTARNFPPSQDASGDLYTTS-----SQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp ESCCSTTCEEEECCCEECSSSSCEEEE-----EEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred EEECCEECceEEcCceeeCCCCcEEEE-----EEEEECHHHcCCCCeEEEEEEECCCC
Confidence 999987662 11222221 24889999999999999999987654
No 468
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.40 E-value=2.9e-12 Score=92.70 Aligned_cols=88 Identities=23% Similarity=0.397 Sum_probs=67.7
Q ss_pred cccCCCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCC----------CcEEEEe---cCCeEEEEEc
Q psy1095 60 RRLTSSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPN----------ARVTIRE---KEDLRFLEIS 126 (325)
Q Consensus 60 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~----------~~~~~~~---~~~~~~l~i~ 126 (325)
.....||.|...|....+.+|+++.|.|.+.+.|.|.+.|++++..+... .++.... ......|.|.
T Consensus 16 ~~~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 95 (137)
T 3qr2_A 16 PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISID 95 (137)
T ss_dssp -----CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEEC
T ss_pred CCCCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEEC
Confidence 34558999999999999999999999999999999999999987765432 1232221 1234679999
Q ss_pred cCCCCCCeEEEEEEEeCCeeE
Q psy1095 127 EVTLEDAGLYTIKVENNYGSV 147 (325)
Q Consensus 127 ~~~~~d~G~Y~C~~~~~~~~~ 147 (325)
+++.+|+|.|+|.+.|..|..
T Consensus 96 ~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 96 TLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp SCCGGGCEEEEEEEECCTTSS
T ss_pred CCCcccCEEEEEEEEecCCcc
Confidence 999999999999999987753
No 469
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.40 E-value=1.3e-13 Score=107.33 Aligned_cols=135 Identities=16% Similarity=0.204 Sum_probs=87.6
Q ss_pred eeeecccCCCCcccCC---CCCC------CCCCCCCcccCCCCCCCcccccccccccc-----c----ccCCCCeeEecC
Q psy1095 11 LSVKLTRPSGLMSGHS---TPRS------TPRSTPPRSISPLSSRTFTPYSLNSAIRT-----R----RLTSSPRFYAVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~---~~~~------~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~----~~~~~p~~~~~~ 72 (325)
+.++|.++++.+.... ..+. ....|.|.+++.+|+|.|+|.+.+..... . .+..+|.+...+
T Consensus 37 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~ 116 (207)
T 2vol_A 37 VQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLP 116 (207)
T ss_dssp CEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEEC
T ss_pred eEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeC
Confidence 4678887775443210 0000 11358899999999999999998765421 1 234678776665
Q ss_pred CceEecCCCeEEEEEEEEe-cCC-CeeEEeeCCeeCCCCCcEE-EEecCCe----EEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 73 HNKICDLGDTVRFQCSVTG-QPA-PWTSWSKDGKPATPNARVT-IREKEDL----RFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~-~p~-~~v~W~~~~~~~~~~~~~~-~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
......+|+.+.|.|.+.| .|. +.++|+++|..+....... ....++. ..|.|.....+|.|.|+|.+.|...
T Consensus 117 ~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 117 PPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp CCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 5443446999999999988 455 4899999999875422111 1112221 2355655556789999999998754
No 470
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.40 E-value=5.3e-12 Score=85.02 Aligned_cols=85 Identities=16% Similarity=0.252 Sum_probs=67.2
Q ss_pred CeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEE
Q psy1095 165 PKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFT 244 (325)
Q Consensus 165 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 244 (325)
+.|...+....+.+|+.+.|.|.+ +.+. +.+.|++++..+..+.++... ..+ ....|.|.+++.+|+|.|+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~--~~v~W~k~~~~l~~~~~~~~~--~~~----~~~~L~I~~v~~~D~G~Y~ 79 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAG--VKVRWQRGGSDISASNKYGLA--TEG----TRHTLTVREVGPADQGSYA 79 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSS--CCCEEECSSSEECSSTTCEEE--EET----TEEEEEESSCCTTCCSEEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCC--CeEEEEECCEECCCCCcEEEE--EcC----CEEEEEEcCCCcccCEEEE
Confidence 556666677889999999999999 5565 789999999988766554433 333 3468999999999999999
Q ss_pred EEEEeCCCcEEeEEEEEE
Q psy1095 245 CRVANELGEVVTSACLIV 262 (325)
Q Consensus 245 C~~~~~~~~~~~~~~l~v 262 (325)
|.+ +.....+.|.|
T Consensus 80 C~a----g~~~~~~~l~V 93 (95)
T 2k1m_A 80 VIA----GSSKVKFDLKV 93 (95)
T ss_dssp EEE----TTEEEEEEEEE
T ss_pred EEE----CCceEEEEEEE
Confidence 999 55666677766
No 471
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.40 E-value=7.3e-14 Score=110.26 Aligned_cols=113 Identities=12% Similarity=0.186 Sum_probs=76.1
Q ss_pred CCCCCcccCCCCCCCcccccccccc-------------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CC
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI-------------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PA 94 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~-------------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~ 94 (325)
.+|.|++++++|+|.|.|.+.+..+ ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~ 158 (225)
T 1op3_H 79 VYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 158 (225)
T ss_dssp EEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSS
T ss_pred EEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECC
Confidence 4789999999999999999977531 112222 24555443322235689999999999885 77
Q ss_pred C-eeEEeeCCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 95 P-WTSWSKDGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 95 ~-~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
+ .+.|++++..+...........++ ...|.|..+..+| |.|+|.+.|..+.
T Consensus 159 p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 159 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp CCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred CeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 6 999999987642110000111111 2358898888888 9999999987654
No 472
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.39 E-value=3.9e-12 Score=88.39 Aligned_cols=100 Identities=17% Similarity=0.337 Sum_probs=71.4
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCce-EEEe-cCCcceeEEEEEeCCCCCCCC
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKP-EVQV-DSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~i~~~~~~d~ 240 (325)
.+|.+...+....+.+|+.+.|.|.+.+.+.+.+.+.|++++..+........ .... .+........|.|.+++.+|+
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccC
Confidence 35777777777889999999999999977543389999999988764321000 0000 011112347899999999999
Q ss_pred eEEEEEEEeCCCc-EEeEEEEEE
Q psy1095 241 GEFTCRVANELGE-VVTSACLIV 262 (325)
Q Consensus 241 G~Y~C~~~~~~~~-~~~~~~l~v 262 (325)
|.|+|.|.|..|. ....+.|.|
T Consensus 89 G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 89 GXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999987 346666665
No 473
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.9e-13 Score=91.46 Aligned_cols=83 Identities=24% Similarity=0.424 Sum_probs=67.2
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
.+|.+...|....+.+|++++|.|.+.+.|.+.+.|+|++..+.... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~ 79 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP---------SPVLILPEIGPQDQGTYSCVATHS 79 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC---------CSEEEEESCCTTTCEEEECEECCS
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC---------CCEEEECCCCcccCEEEEEEEEeC
Confidence 56788888888889999999999999999999999999998876432 236999999999999999999986
Q ss_pred CeeE--EEEEEEEE
Q psy1095 144 YGSV--EATARLEI 155 (325)
Q Consensus 144 ~~~~--~~~~~l~v 155 (325)
.+.. ...+.|.|
T Consensus 80 ~~~~~~s~~~~v~V 93 (96)
T 2ens_A 80 SHGPQESRAVSISI 93 (96)
T ss_dssp SCCCEECCCEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 4432 33444444
No 474
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.39 E-value=2.1e-13 Score=109.64 Aligned_cols=120 Identities=13% Similarity=0.169 Sum_probs=78.1
Q ss_pred CCCCcccCCCCCCCccccccccc-------c--ccccc----CCCCeeEecCCceEecCCCeEEEEEEEEe-cCCC-eeE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSA-------I--RTRRL----TSSPRFYAVPHNKICDLGDTVRFQCSVTG-QPAP-WTS 98 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~-------~--~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~ 98 (325)
+|+|++++.+|+|.|.|.+.+.. + ....+ ..+|.+...+....+.+|+.++|.|.+.+ .|.+ .+.
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 159 (253)
T 3liz_H 80 FLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 159 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEE
T ss_pred EEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEE
Confidence 48999999999999999997652 1 11222 25666665555455678999999999988 6766 899
Q ss_pred EeeCCeeCCCCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy1095 99 WSKDGKPATPNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGSVEATARLE 154 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 154 (325)
|++++..+...........+ ....|.|.....+| |.|+|.+.|..+.......+.
T Consensus 160 W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~ 217 (253)
T 3liz_H 160 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 217 (253)
T ss_dssp EGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred EEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEec
Confidence 99988743110000001111 11458899999999 999999999877655544444
No 475
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=9.6e-13 Score=90.18 Aligned_cols=92 Identities=21% Similarity=0.427 Sum_probs=70.5
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+ +. +.+.|++++..+....++... .++ ....|.|.+++.+|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~--~~v~W~k~g~~~~~~~~~~~~--~~~----~~~~L~I~~v~~~D~G~ 77 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AG--TPVHWLKDRKAIRKSQKYDVV--CEG----TMAMLVIRGASLKDAGE 77 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SS--CCCCEEESSCBCCCSSSEEEE--EET----TEEEEEESSCCTTTCSE
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CC--CcEEEEECCEEccCCCCEEEE--ECC----CEEEEEECCCCcccCEE
Confidence 3567777777888999999999999986 55 689999999888665543332 333 34689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEEeeCC
Q psy1095 243 FTCRVANELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~~~~~ 267 (325)
|+|.+.| ....+.|.|...+.
T Consensus 78 Y~C~a~n----~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 78 YTCEVEA----SKSTASLHVEEKAS 98 (103)
T ss_dssp EEEECSS----CEEEEEEEECCCSS
T ss_pred EEEEEcc----CCcEEEEEEeCCCC
Confidence 9999988 35667777754443
No 476
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=89.04 Aligned_cols=80 Identities=21% Similarity=0.395 Sum_probs=67.3
Q ss_pred ceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy1095 74 NKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENNYGSVEATARL 153 (325)
Q Consensus 74 ~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 153 (325)
...+.+|+++.|.|.+. .|.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.+.+ ....+.|
T Consensus 20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~~l 94 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSFRL 94 (102)
T ss_dssp EEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT----EECCEEE
T ss_pred cEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC----CcEEEEE
Confidence 45788999999999998 788999999999999887788877777778899999999999999999843 3445677
Q ss_pred EEECC
Q psy1095 154 EIMDP 158 (325)
Q Consensus 154 ~v~~~ 158 (325)
.|..+
T Consensus 95 ~V~~p 99 (102)
T 2eo1_A 95 QVAGQ 99 (102)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 77654
No 477
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.39 E-value=9.1e-12 Score=88.09 Aligned_cols=93 Identities=18% Similarity=0.270 Sum_probs=66.7
Q ss_pred CeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEecc----CCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEE
Q psy1095 173 NLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKL----DSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVA 248 (325)
Q Consensus 173 ~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 248 (325)
...+.+|+.+.|.|.+.+.|.+.+.+.|++++..+.. ....... .........+.|.|.+++.+|+|.|+|.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ--SGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEE--EETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccc--cCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 3478899999999999996544378999998874321 1111000 000011134689999999999999999999
Q ss_pred eCCCcEEeEEEEEEEeeCC
Q psy1095 249 NELGEVVTSACLIVDVVKG 267 (325)
Q Consensus 249 ~~~~~~~~~~~l~v~~~~~ 267 (325)
|..|.....+.|.|...+-
T Consensus 95 n~~g~~~~~~~l~V~~~p~ 113 (122)
T 3s35_X 95 SGLMTKKNSTFVRVHEKPF 113 (122)
T ss_dssp CSSCEEEEEEEEEEEEEEC
T ss_pred cCCCceEEEEEEEEeccCe
Confidence 9999999888888865543
No 478
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.38 E-value=3.4e-12 Score=90.55 Aligned_cols=91 Identities=12% Similarity=0.232 Sum_probs=70.8
Q ss_pred eEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeC--------CCCCcEEEEe-cCCeEEEEEccCCCCCCeEEEE
Q psy1095 68 FYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPA--------TPNARVTIRE-KEDLRFLEISEVTLEDAGLYTI 138 (325)
Q Consensus 68 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~--------~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C 138 (325)
+...+....+.+|++++|.|.+.+.|.+.+.|++++..+ ....++.+.. .....+|.|.+++.+|+|.|+|
T Consensus 4 ~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 83 (124)
T 3rbg_A 4 LTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKC 83 (124)
T ss_dssp CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred ccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEE
Confidence 344556678999999999999999899999999765432 1334454432 3345789999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEECCC
Q psy1095 139 KVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 139 ~~~~~~~~~~~~~~l~v~~~~ 159 (325)
.+.|. +.....+.|.|...|
T Consensus 84 ~a~n~-g~~~~~~~l~V~~~P 103 (124)
T 3rbg_A 84 LHYSD-SVSTKEVKVIVLATM 103 (124)
T ss_dssp EEESS-SEEEEEEEEEEECC-
T ss_pred EEEcC-CCCcEEEEEEEEeCC
Confidence 99998 888888889988764
No 479
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.38 E-value=6.7e-14 Score=109.68 Aligned_cols=118 Identities=14% Similarity=0.108 Sum_probs=71.2
Q ss_pred CCCCcccCCCCCCCcccccccccc-------c--ccccC----CCCeeEecCCceEecCCCeEEEEEEEEecC--CCeeE
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSAI-------R--TRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQP--APWTS 98 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~~-------~--~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~ 98 (325)
+|+|++++++|+|.|.|.+.+... . ...+. .+|.+...+....+.+|+.++|.|.+.+.+ ...+.
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~ 155 (215)
T 3nl4_H 76 DLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVT 155 (215)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEE
Confidence 589999999999999999976532 1 12222 466666444444567899999999998854 33578
Q ss_pred EeeCCeeCCCCCcEEEEecCCeEEE-EEccCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy1095 99 WSKDGKPATPNARVTIREKEDLRFL-EISEVTLEDAGLYTIKVENNYGSVEATAR 152 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~~~~~~~~~l-~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 152 (325)
|++++..+...........++...+ ....+...| |.|+|.+.|..+.......
T Consensus 156 W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 156 WNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp EGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred EeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 9998875532111111221222111 114456667 9999999998775544443
No 480
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.38 E-value=1e-13 Score=108.83 Aligned_cols=135 Identities=14% Similarity=0.199 Sum_probs=86.7
Q ss_pred eeeecccCCCCcccCCC---CC------CCCCCCCCcccCCCCCCCcccccccccccc-----c----ccCCCCeeEecC
Q psy1095 11 LSVKLTRPSGLMSGHST---PR------STPRSTPPRSISPLSSRTFTPYSLNSAIRT-----R----RLTSSPRFYAVP 72 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~---~~------~~~~~l~i~~v~~~d~G~Y~c~~~~~~~~~-----~----~~~~~p~~~~~~ 72 (325)
..++|.+++..+..... .+ ....+|.|.+++.+|+|.|+|.+.+..... . .+..+|.+...+
T Consensus 45 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~ 124 (218)
T 2rgs_A 45 VQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILP 124 (218)
T ss_dssp EEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEEC
T ss_pred eEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEEC
Confidence 56888877755432110 00 012368899999999999999998764321 1 334677776655
Q ss_pred CceEecCCCeEEEEEEEEe-cCCC-eeEEeeCCeeCCCCCcEEEE-ecCCe----EEEEEccCCCCCCeEEEEEEEeCCe
Q psy1095 73 HNKICDLGDTVRFQCSVTG-QPAP-WTSWSKDGKPATPNARVTIR-EKEDL----RFLEISEVTLEDAGLYTIKVENNYG 145 (325)
Q Consensus 73 ~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~~~~~~~~~~~~~~~~-~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~ 145 (325)
......+|+.++|.|.+.| +|.+ .|+|++++..+......... ..++. ..|.|.....+|.|.|+|.+.|...
T Consensus 125 ~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 125 PPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp CCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred CChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 5433346999999999998 6765 89999999887432111111 11221 1244544444568999999998754
No 481
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.37 E-value=1.5e-12 Score=89.73 Aligned_cols=90 Identities=22% Similarity=0.329 Sum_probs=70.4
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.+. + +.|++++..+....++... .++ ....|.|.+++.+|+|.
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~--~-v~W~k~g~~~~~~~~~~~~--~~~----~~~~L~I~~v~~~D~G~ 77 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKV--T-GKWYKNGVEVRPSKRITIS--HVG----RFHKLVIDDVRPEDEGD 77 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSC--E-EEEEESSCBCCCCSSCEEE--EET----TEEEEEESSCCTTTCSC
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCc--c-eEEEcCCEECcCCCCEEEE--EeC----CEEEEEECCCCcCCCEE
Confidence 4577888888889999999999999987765 5 9999999988766555433 333 34689999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEE
Q psy1095 243 FTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|+|.|.|. .....+.|.|.
T Consensus 78 Y~C~a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 78 YTFVPDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EEEEEETS--CCCCCBCEEEE
T ss_pred EEEEEccC--CceEEEEEEEE
Confidence 99999998 33344555553
No 482
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.37 E-value=1.7e-13 Score=109.65 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=77.7
Q ss_pred CCCCCcccCCCCCCCcccccccccc---------cccccC------CCCeeE-ecCCceEecCCCeEEEEEEEEecCCC-
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI---------RTRRLT------SSPRFY-AVPHNKICDLGDTVRFQCSVTGQPAP- 95 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~---------~~~~~~------~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~~- 95 (325)
.+|.|.+++++|+|.|.|.+.+... ....+. .+|.+. ..|....+.+|+.++|.|.+.+.|.+
T Consensus 77 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~ 156 (246)
T 4dzb_B 77 STLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 156 (246)
T ss_dssp EEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCc
Confidence 3789999999999999999975421 111221 355554 33444456679999999999886544
Q ss_pred -eeEEeeCCeeCCCCCcEEEEe-------cCCe----EEEEEccCCCCC-CeEEEEEEEeCCee
Q psy1095 96 -WTSWSKDGKPATPNARVTIRE-------KEDL----RFLEISEVTLED-AGLYTIKVENNYGS 146 (325)
Q Consensus 96 -~v~W~~~~~~~~~~~~~~~~~-------~~~~----~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 146 (325)
.++|++++..+.......... .++. ..|.|.....+| .|.|+|.+.|....
T Consensus 157 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 157 VELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred eEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 899999999886532111000 1221 237888887778 99999999886543
No 483
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.37 E-value=4.5e-12 Score=86.26 Aligned_cols=87 Identities=20% Similarity=0.295 Sum_probs=67.7
Q ss_pred CCeeeecCcC-eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 164 RPKVLNGLEN-LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 164 ~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
+|.|...+.+ ..+.+|+.+.|.|.+. .|. +.+.|++++..+..+.++... ..+ ....|.|.+++.+|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~--~~v~W~k~g~~i~~~~~~~~~--~~~----~~~~L~I~~~~~~D~G~ 77 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPK--LEVKWYKNGQEIRPSTKYIFE--HKG----CQRILFINNCQMTDDSE 77 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTT--SCEEEEESSCBCCCBTTEEEE--EET----TEEEEEEEEECTTTCCE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCC--ceEEEEECCEECCCCCCEEEE--ecC----CEEEEEEcCCCcCcCEE
Confidence 5667666665 5788999999999997 565 899999999888765544332 333 34589999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEEE
Q psy1095 243 FTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
|+|.| +.....+.|.|.
T Consensus 78 Y~C~a----g~~~~~~~l~V~ 94 (100)
T 2yuv_A 78 YYVTA----GDEKCSTELFVR 94 (100)
T ss_dssp EEEEE----TTEEEEEEEEEC
T ss_pred EEEEE----CCceEEEEEEEe
Confidence 99999 667777778774
No 484
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=2.6e-12 Score=88.12 Aligned_cols=90 Identities=19% Similarity=0.356 Sum_probs=67.8
Q ss_pred CCeeeecCcC---eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 164 RPKVLNGLEN---LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 164 ~p~~~~~~~~---~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
+|.+...+.. ..+.+|+.+.|.|.+.+.+. + +.|++++..+....++... ..+ ....|.|.+++.+|+
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~--~-v~W~k~g~~~~~~~~~~~~--~~~----~~~~L~I~~~~~~D~ 77 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDF--P-ATWYKDGQKVEESELLVVK--MDG----RKHRLILPEAKVQDS 77 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTC--C-CEEEETTEECCCBTTBEEE--EET----TEEEEEESSCCTTTC
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCC--c-cEEeeCCEECCCCCCEEEE--eCC----CEEEEEECCCChhhC
Confidence 3455555555 67899999999999988877 6 9999999988766554333 333 346899999999999
Q ss_pred eEEEEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 241 GEFTCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
|.|+|.+.|..+ .+.|.|...+
T Consensus 78 G~Y~C~a~n~~~----~~~l~V~~~P 99 (104)
T 2e6p_A 78 GEFECRTEGVSA----FFGVTVQDPS 99 (104)
T ss_dssp EEEEEECSSCCC----CEEEEEECCC
T ss_pred EEEEEEECCceE----EEEEEEcCCC
Confidence 999999988633 5666665443
No 485
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.36 E-value=5.3e-13 Score=104.52 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=73.7
Q ss_pred CCCCCcccCCCCCCCcccccccccc--------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI--------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTS 98 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~ 98 (325)
.+|+|++++++|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.| .+.
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 157 (215)
T 1c5d_H 78 VFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVT 157 (215)
T ss_dssp EEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEE
Confidence 3789999999999999999977531 112222 34666554433346789999999999886 877 999
Q ss_pred EeeCCeeCCCCCcEEEEecCCeEEE--EEccCCCCCCeEEEEEEEeCCeeEE
Q psy1095 99 WSKDGKPATPNARVTIREKEDLRFL--EISEVTLEDAGLYTIKVENNYGSVE 148 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~~~~~~~~~l--~i~~~~~~d~G~Y~C~~~~~~~~~~ 148 (325)
|++++..+........... +...+ .+.....+| |.|+|.+.|..+...
T Consensus 158 W~~~g~~~~~~~~~~~~~~-g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~ 207 (215)
T 1c5d_H 158 WNSGALSSDVHTFPAVLQS-GLYTLTSSVTSSTWPS-QTVTCNVAHPASSTK 207 (215)
T ss_dssp EGGGTTCCSCCBCCCEEET-TEEEEEEEEEESSTTT-SCCEEEEEEGGGTEE
T ss_pred EccCCccCceEecCcccCC-CCEEEEEEEecccCCC-CeEEEEEEeCCCCcc
Confidence 9998865432111111111 22221 123344356 999999999877543
No 486
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.35 E-value=3.3e-12 Score=89.06 Aligned_cols=99 Identities=23% Similarity=0.430 Sum_probs=73.1
Q ss_pred EEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEE
Q psy1095 149 ATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIA 228 (325)
Q Consensus 149 ~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (325)
..+.|.|... +|.+...+....+.+|+.+.|.|.+.+. +.+.|++++..+..+.++... .++ ...
T Consensus 9 ~~~~l~V~~~-----pp~~~~~~~~~~v~~G~~v~l~C~~~~~----p~v~W~k~~~~l~~~~~~~~~--~~~----~~~ 73 (113)
T 2edh_A 9 TSAMLTVRAL-----PIKFTEGLRNEEATEGATAVLRCELSKM----APVEWWKGHETLRDGDRHSLR--QDG----ARC 73 (113)
T ss_dssp CCCCCCCCCS-----CCCEEECCCCCEECTTSCEEEEEEESSC----CCCEEEESSSBCCCSSSEEEE--EET----TEE
T ss_pred EEEEEEEEcC-----CCcccccCCceEEeCCCeEEEEEEECCC----CcEEEEECCEECCCCCcEEEE--ECC----CEE
Confidence 3444555443 3566666777889999999999999653 569999999988765544333 333 346
Q ss_pred EEEeCCCCCCCCeEEEEEEEeCCCcEEeEEEEEEEeeC
Q psy1095 229 RLKIPHVYPEDEGEFTCRVANELGEVVTSACLIVDVVK 266 (325)
Q Consensus 229 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 266 (325)
.|.|.+++.+|+|.|+|.| +.....+.|.|...+
T Consensus 74 ~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 74 ELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107 (113)
T ss_dssp EEEECSCCSTTCEEEEEEE----TTEEEEEEEEECCCC
T ss_pred EEEECCCChhhCEEEEEEe----CCCCEEEEEEEeCCC
Confidence 8999999999999999999 677777888884433
No 487
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.34 E-value=5.5e-14 Score=99.65 Aligned_cols=93 Identities=19% Similarity=0.349 Sum_probs=70.3
Q ss_pred CeeeecCcCeeEecCCcEEEEEEEEecCCCCCe-eEEeeCCEEeccC--CCCceEEEecCCcceeEEEEEeCCCCCCCC-
Q psy1095 165 PKVLNGLENLRCCDGDSVTFECQVQVVPPNDHD-ISWFRNNRLIKLD--SDMKPEVQVDSKENLVIARLKIPHVYPEDE- 240 (325)
Q Consensus 165 p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~-~~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~- 240 (325)
|.+.. +....+.+|+.+.|.|.+.+.|. +. +.|++++..+... .++.......+ ....+.|.|.+++.+|.
T Consensus 15 P~i~~-~~~~~~~~G~~v~l~C~~~g~P~--p~~i~W~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~~ 89 (122)
T 2cry_A 15 PIISS-TQTQHALHGEKGQIKCFIRSTPP--PDRIAWSWKENVLESGTSGRYTVETISTE--EGVISTLTISNIVRADFQ 89 (122)
T ss_dssp CCEEE-ECCCCCCTTSCCCCCEEECCSSC--CSEEEEESSSCEECSEEETTEEEEEEEET--TEEEEEEECTTCCHHHHH
T ss_pred CCccC-CCeEEEecCCCEEEEEEEeecCC--CcEeEEEECCEEccCCCCCCEEEEEecCC--CceEEEEEEcCCChhhCC
Confidence 55555 56677889999999999999988 65 9999999887642 22222111111 11256899999999999
Q ss_pred eEEEEEEEeCCCcEEeEEEEEE
Q psy1095 241 GEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
|.|+|.|.|..|.....+.|.|
T Consensus 90 G~Y~C~a~N~~G~~~~~~~l~V 111 (122)
T 2cry_A 90 TIYNCTAWNSFGSDTEIIRLKE 111 (122)
T ss_dssp SCEEEEEECSSCEEEEEECCCC
T ss_pred ceEEEEEECCCCeEEEEEEEEE
Confidence 9999999999999887777776
No 488
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.34 E-value=1.8e-11 Score=94.97 Aligned_cols=163 Identities=17% Similarity=0.195 Sum_probs=104.2
Q ss_pred eeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCC--ee---C-C--C------CCcEEEEe--cCCeEEEEEccCCC
Q psy1095 67 RFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDG--KP---A-T--P------NARVTIRE--KEDLRFLEISEVTL 130 (325)
Q Consensus 67 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~--~~---~-~--~------~~~~~~~~--~~~~~~l~i~~~~~ 130 (325)
.+.+.|....+.+|++++|.|.+.+...+.+.|||.. .. + . . ..++.... .....+|.|.+++.
T Consensus 5 ~v~Q~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 84 (210)
T 2eys_A 5 QVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQL 84 (210)
T ss_dssp CEEEECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCG
T ss_pred eEEEeCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCc
Confidence 3556677888999999999999977666689999842 11 1 1 1 23455432 23457899999999
Q ss_pred CCCeEEEEEEEeCC---e--eEEEEEEEEEECCCcccCCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCE
Q psy1095 131 EDAGLYTIKVENNY---G--SVEATARLEIMDPRAIISRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNR 205 (325)
Q Consensus 131 ~d~G~Y~C~~~~~~---~--~~~~~~~l~v~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~ 205 (325)
+|+|.|.|.+.+.. . .......|.|..... ...|.+...... .+.++|.|.+.++.+. +.+.+..++.
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~-~~~P~V~~~~~~-----~~~~tl~Cl~~gf~P~-~~v~~~~~~~ 157 (210)
T 2eys_A 85 SDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQ-NPDPAVYQLRDS-----KSSDKSVCLFTDFDSQ-TNVSQSKDSD 157 (210)
T ss_dssp GGCEEEEEEEESCSSTTCCEEECCCEEEEEECCCS-SCCCEEEEECCC-----SSSSCEEEEEESCCTT-CCCCCCSSTT
T ss_pred ccCceEEEEEEccCCCcccceECCCEEEEEECCCC-CCCCeEEecCCC-----CCCceEEEEcccccCC-cEeccccCcc
Confidence 99999999997632 1 111234667764321 123554433221 2378999999998875 5543322111
Q ss_pred EeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCC
Q psy1095 206 LIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELG 252 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 252 (325)
. .. .. ...|.+..+...+.|.|.|.+.+..+
T Consensus 158 ~---------~~-t~------~~~l~~~~~~~~~~~~~~w~~~~~~~ 188 (210)
T 2eys_A 158 V---------YI-TD------KCVLDMRSMDFKSNSAVAWSNKSDFA 188 (210)
T ss_dssp E---------EE-CC------CEEEEETTTTEEEEEEEEEECSTTCC
T ss_pred e---------Ec-cC------chhcchhcccccccchhhccCCCceE
Confidence 1 00 11 14678888888899999998877554
No 489
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=1.3e-12 Score=88.23 Aligned_cols=83 Identities=20% Similarity=0.448 Sum_probs=65.3
Q ss_pred CCCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeE
Q psy1095 163 SRPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGE 242 (325)
Q Consensus 163 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 242 (325)
.+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+..... ..|.|.+++.+|+|.
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~--~~v~W~k~~~~~~~~~~---------------~~L~i~~v~~~d~G~ 71 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPS--PQIHWMKDGVPLPLPPS---------------PVLILPEIGPQDQGT 71 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSS--CCCCCEESSSBCSSCCC---------------SEEEEESCCTTTCEE
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCC--CEEEEEECCEECcCCCC---------------CEEEECCCCcccCEE
Confidence 4566777777778999999999999988887 78999999887754321 379999999999999
Q ss_pred EEEEEEeCCCcEEeEEEEEE
Q psy1095 243 FTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 243 Y~C~~~~~~~~~~~~~~l~v 262 (325)
|+|.+.|..+....+..+.+
T Consensus 72 Y~C~a~n~~~~~~~s~~~~v 91 (96)
T 2ens_A 72 YSCVATHSSHGPQESRAVSI 91 (96)
T ss_dssp EECEECCSSCCCEECCCEEE
T ss_pred EEEEEEeCCCCcEEEEEEEE
Confidence 99999997655444433433
No 490
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.33 E-value=3.4e-13 Score=107.46 Aligned_cols=114 Identities=13% Similarity=0.105 Sum_probs=77.6
Q ss_pred CCCCCCcccCCCCCCCcccccccc--c------cccccc------CCCCeeEe-cCCceEecCCCeEEEEEEEEe-cCCC
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNS--A------IRTRRL------TSSPRFYA-VPHNKICDLGDTVRFQCSVTG-QPAP 95 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~--~------~~~~~~------~~~p~~~~-~~~~~~v~~g~~v~l~C~~~~-~p~~ 95 (325)
..+|.|++++++|+|.|.|.+.+. . .....+ ..+|.+.. .|....+.+|+.++|.|.+.+ .|.+
T Consensus 74 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 153 (240)
T 3q5y_A 74 HSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDH 153 (240)
T ss_dssp CEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCC
Confidence 446899999999999999999621 1 011111 14555543 344445667999999999988 6666
Q ss_pred -eeEEeeCCeeCCCCCcEE---EEecCCe----EEEEEccCCCCC-CeEEEEEEEeCCe
Q psy1095 96 -WTSWSKDGKPATPNARVT---IREKEDL----RFLEISEVTLED-AGLYTIKVENNYG 145 (325)
Q Consensus 96 -~v~W~~~~~~~~~~~~~~---~~~~~~~----~~l~i~~~~~~d-~G~Y~C~~~~~~~ 145 (325)
.+.|+++|..+....... ....++. ..|.|.....+| .|.|+|.+.+...
T Consensus 154 ~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 154 VELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred eEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 789999999886532211 1112222 238888888888 6799999988654
No 491
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.33 E-value=1.4e-11 Score=85.00 Aligned_cols=95 Identities=19% Similarity=0.309 Sum_probs=68.0
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCE-EeccCC-----CCceEEEecCCcceeEEEEEeCCCCC
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNR-LIKLDS-----DMKPEVQVDSKENLVIARLKIPHVYP 237 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~l~i~~~~~ 237 (325)
.|.+...+....+.+|+.+.|.|.+.+.+. +.+.|++++. .+.... ..+....... .....|.|.+++.
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~L~I~~v~~ 80 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDN--TSLQWSNPAQQTLYFDDKKALRDNRIELVRAS---WHELSISVSDVSL 80 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSS--CCEEEECTTCCEEEETTEECSCCTTEEEEEES---SSEEEEEECSCCG
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCc--cEEEEEcCCCceEEEcCCcccccCcEEEeecC---CCcEEEEECCCCh
Confidence 355566667888999999999999998876 7899999775 222211 0111111110 0357899999999
Q ss_pred CCCeEEEEEEEeCCCcEEeEEEEEEEe
Q psy1095 238 EDEGEFTCRVANELGEVVTSACLIVDV 264 (325)
Q Consensus 238 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 264 (325)
+|+|.|+|.+.| .+.....+.|.|..
T Consensus 81 ~D~G~Y~C~~~n-~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 81 SDEGQYTCSLFT-MPVKTSKAYLTVLG 106 (108)
T ss_dssp GGCEEEEEEECS-SSCEEEEEEEEEEC
T ss_pred hHCeEEEEEEEc-CCCcEEEEEEEEEc
Confidence 999999999999 88888888888753
No 492
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.33 E-value=1.4e-11 Score=84.29 Aligned_cols=87 Identities=20% Similarity=0.336 Sum_probs=65.5
Q ss_pred CCCeeeecCcC-eeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccC-CCCceEEEecCCcceeEEEEEeCCCCCCCC
Q psy1095 163 SRPKVLNGLEN-LRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLD-SDMKPEVQVDSKENLVIARLKIPHVYPEDE 240 (325)
Q Consensus 163 ~~p~~~~~~~~-~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 240 (325)
.+|.|...+.. ..+.+|+.+.|.|.+ +.|. +.+.|++++..+..+ .++... .++ ....|.|.+++.+|+
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~--~~v~W~k~g~~l~~~~~~~~~~--~~~----~~~~L~I~~v~~~D~ 84 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHD--AEVKWLKNGQEIQMSGSKYIFE--SIG----AKRTLTISQCSLADD 84 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSS--SCCEEEESSSEECCCSSSSEEE--EET----TEEEEEECSCSSSSC
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCC--CEEEEEECCEECCCCCCeEEEE--ecC----CEEEEEECCCCcccC
Confidence 34666666656 679999999999999 5666 789999999988765 443322 333 246899999999999
Q ss_pred eEEEEEEEeCCCcEEeEEEEEE
Q psy1095 241 GEFTCRVANELGEVVTSACLIV 262 (325)
Q Consensus 241 G~Y~C~~~~~~~~~~~~~~l~v 262 (325)
|.|+|.+ +.....+.|.|
T Consensus 85 G~Y~C~a----~~~~~~~~l~V 102 (104)
T 1pd6_A 85 AAYQCVV----GGEKCSTELFV 102 (104)
T ss_dssp EEEEEEE----TTEEECCEEEE
T ss_pred EEEEEEE----CCCcEEEEEEE
Confidence 9999999 44555566665
No 493
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.33 E-value=8.4e-13 Score=106.49 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=75.1
Q ss_pred CCCCCcccCCCCCCCcccccccccc--------cccccC----CCCeeEecCCceEecCCCeEEEEEEEEec-CCC-eeE
Q psy1095 33 RSTPPRSISPLSSRTFTPYSLNSAI--------RTRRLT----SSPRFYAVPHNKICDLGDTVRFQCSVTGQ-PAP-WTS 98 (325)
Q Consensus 33 ~~l~i~~v~~~d~G~Y~c~~~~~~~--------~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~ 98 (325)
.+|+|++++++|+|.|.|.+.+... ..+.+. .+|.+...+....+.+|+.++|.|.+.+. |.+ .|.
T Consensus 85 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~ 164 (261)
T 2xqy_G 85 VYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 164 (261)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEE
Confidence 4789999999999999999977421 112222 34666544433346789999999999884 776 999
Q ss_pred EeeCCeeCCCCCcEEEEecC---CeEEEEEccCCCCCCeEEEEEEEeCCee
Q psy1095 99 WSKDGKPATPNARVTIREKE---DLRFLEISEVTLEDAGLYTIKVENNYGS 146 (325)
Q Consensus 99 W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 146 (325)
|++++..+.......+...+ ....|.|.....+| |.|+|.+.|....
T Consensus 165 W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 165 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp EGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 99998765311000011111 12458898888878 9999999986543
No 494
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.33 E-value=5.4e-13 Score=105.77 Aligned_cols=121 Identities=13% Similarity=0.210 Sum_probs=74.7
Q ss_pred CCCCcccCCCCCCCccccccccc-----------c--ccccc----CCCCeeEecCCceEecCCCeEEEEEEEEec-C-C
Q psy1095 34 STPPRSISPLSSRTFTPYSLNSA-----------I--RTRRL----TSSPRFYAVPHNKICDLGDTVRFQCSVTGQ-P-A 94 (325)
Q Consensus 34 ~l~i~~v~~~d~G~Y~c~~~~~~-----------~--~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p-~ 94 (325)
+|+|.+++++|+|.|.|.+.+.. . ....+ ..+|.+...+....+..|+.++|.|.+.+. | .
T Consensus 84 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~ 163 (232)
T 3qhz_H 84 VLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 163 (232)
T ss_dssp EEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSC
T ss_pred EEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCC
Confidence 58899999999999999997541 1 11222 246666644444456679999999999874 4 3
Q ss_pred CeeEEeeCCeeCCCCCcEEEEecCC----eEEEEEccCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy1095 95 PWTSWSKDGKPATPNARVTIREKED----LRFLEISEVTLEDAGLYTIKVENNYGSVEATARLEI 155 (325)
Q Consensus 95 ~~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 155 (325)
..+.|++++..+...........++ ...|.|......| |.|+|.+.+..+.......|.+
T Consensus 164 ~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 164 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred eEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 3578999886432110000111111 1358888888888 9999999998765555544443
No 495
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.7e-12 Score=88.57 Aligned_cols=89 Identities=20% Similarity=0.290 Sum_probs=67.5
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCC--ceEEEecCCcceeEEEEEeCCCCCCCCe
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDM--KPEVQVDSKENLVIARLKIPHVYPEDEG 241 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G 241 (325)
+|.+...+....+.+|+.+.|.|.+.+.+ +.+.|++++..+...... +......+ ....|.|.+++.+|+|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~---~~v~W~k~g~~i~~~~~~~~~~~~~~~~----~~~~L~I~~~~~~D~G 80 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG---AQVMWMKNGVELTREDSFKARYRFKKDG----KRHILIFSDVVQEDRG 80 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS---CCCEEEESSCBCCCSCCSSCCCEEEECS----SEEEEECSSCCGGGCS
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC---CEEEEEECCEECCCCCCcceeEEEEECC----CEEEEEECCCChhhCE
Confidence 46677777778899999999999998765 579999999988766533 22333444 3568999999999999
Q ss_pred EEEEEEEeCCCcEEeEEEEEEE
Q psy1095 242 EFTCRVANELGEVVTSACLIVD 263 (325)
Q Consensus 242 ~Y~C~~~~~~~~~~~~~~l~v~ 263 (325)
.|+|.|.| ....+.|.|.
T Consensus 81 ~Y~C~a~n----~~~~~~l~V~ 98 (101)
T 2edk_A 81 RYQVITNG----GQCEAELIVE 98 (101)
T ss_dssp BEEEECSS----CEECCBEEEE
T ss_pred EEEEEEcC----CcEEEEEEEe
Confidence 99999976 3344556653
No 496
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.32 E-value=6.1e-12 Score=88.41 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=63.8
Q ss_pred CcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCCceEEEecCCcceeEEEEEeCCCCCCCCeEEEEEEEeCCCcEEeEEE
Q psy1095 180 DSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDMKPEVQVDSKENLVIARLKIPHVYPEDEGEFTCRVANELGEVVTSAC 259 (325)
Q Consensus 180 ~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 259 (325)
....|.|.+.|.|. +.+.|++++..+............. .....+.|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 21 ~~~~l~C~~~g~P~--p~i~W~k~g~~l~~~~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 96 (118)
T 1wwc_A 21 LEHCIEFVVRGNPP--PTLHWLHNGQPLRESKIIHVEYYQE--GEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTIN 96 (118)
T ss_dssp CEEEEEEEEECSSC--CEEEEEETTEECCCSSSEEEEEEEC--SSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cceEEEEEeeeeCC--CeEEEEECCEECCCCCceeEEEecc--CccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEE
Confidence 56789999999888 8999999999987665443332221 1123568999999999999999999999999988888
Q ss_pred EEEEe
Q psy1095 260 LIVDV 264 (325)
Q Consensus 260 l~v~~ 264 (325)
|.|..
T Consensus 97 l~v~~ 101 (118)
T 1wwc_A 97 GHFLK 101 (118)
T ss_dssp ECCSC
T ss_pred EEEcc
Confidence 87643
No 497
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=1.6e-11 Score=84.49 Aligned_cols=91 Identities=21% Similarity=0.354 Sum_probs=69.1
Q ss_pred CCeeeecCcCeeEecCCcEEEEEEEEecCCCCCeeEEeeCCEEeccCCCC--------ceEEEecCCcceeEEEEEeCCC
Q psy1095 164 RPKVLNGLENLRCCDGDSVTFECQVQVVPPNDHDISWFRNNRLIKLDSDM--------KPEVQVDSKENLVIARLKIPHV 235 (325)
Q Consensus 164 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~~~~W~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~ 235 (325)
++.+...+.+..+.+|+.+.|.|.+.+ . +.+.|++||.++..+... +.....++ ....|.|.++
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~--p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g----~~~~L~I~~v 79 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--I--IQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKG----LQHRLILHAV 79 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--C--CCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBT----TEEEEEEESC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--C--CeEEEEECCEECccCcccccccccccEEEEEeCC----cEEEEEECCC
Confidence 467888888999999999999999986 3 689999999999766411 22222333 3568999999
Q ss_pred CCCCCeEEEEEEEeCCCcEEeEEEEEEEee
Q psy1095 236 YPEDEGEFTCRVANELGEVVTSACLIVDVV 265 (325)
Q Consensus 236 ~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 265 (325)
+.+|+|.|+|...+ ....++.|.|...
T Consensus 80 ~~~D~G~Y~~~~~~---~~~ssA~L~V~~~ 106 (112)
T 2e6q_A 80 KHQDSGALVGFSCP---GVQDSAALTIQES 106 (112)
T ss_dssp CSTTCSEEEEEEET---TEEEEEEEEEECS
T ss_pred CHHHCccEEEEEEC---CeeEEEEEEEeCC
Confidence 99999999875443 3456788888543
No 498
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=90.50 Aligned_cols=92 Identities=18% Similarity=0.264 Sum_probs=72.0
Q ss_pred CeeEecCCceEecCCCeEEEEEEEEecCCCeeEEe---------eCCeeCCCCCcEEEE-ecCCeEEEEEccCCCCCCeE
Q psy1095 66 PRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWS---------KDGKPATPNARVTIR-EKEDLRFLEISEVTLEDAGL 135 (325)
Q Consensus 66 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~---------~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~ 135 (325)
..+...|....+.+|++++|.|.+.+.+.+.+.|+ +++..+. ..++... ......+|.|.+++.+|+|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 117 (145)
T 1z9m_A 39 DDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGE 117 (145)
T ss_dssp CTTCCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEE
T ss_pred cceecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEE
Confidence 34455677888999999999999988888899999 4444333 3455533 23446789999999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEECCC
Q psy1095 136 YTIKVENNYGSVEATARLEIMDPR 159 (325)
Q Consensus 136 Y~C~~~~~~~~~~~~~~l~v~~~~ 159 (325)
|+|.+.|. +.....+.|.|..+|
T Consensus 118 Y~C~~~n~-~~~~~~~~L~V~~~P 140 (145)
T 1z9m_A 118 YTCSIFTM-PVRTAKSLVTVLGIP 140 (145)
T ss_dssp EEEEECSS-SCEEEEEEEEEECCC
T ss_pred EEEEEEcC-CCceEEEEEEEEeCC
Confidence 99999998 777888889988763
No 499
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.32 E-value=4.2e-13 Score=108.84 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=76.0
Q ss_pred CCCCCCcccCCCCCCCccccccccc-------ccccccC------CCCeeEe-cCCceEecCCCeEEEEEEEEecCC-C-
Q psy1095 32 PRSTPPRSISPLSSRTFTPYSLNSA-------IRTRRLT------SSPRFYA-VPHNKICDLGDTVRFQCSVTGQPA-P- 95 (325)
Q Consensus 32 ~~~l~i~~v~~~d~G~Y~c~~~~~~-------~~~~~~~------~~p~~~~-~~~~~~v~~g~~v~l~C~~~~~p~-~- 95 (325)
..+|.|++++++|+|.|.|.+.+.. .....+. .+|.+.. .+....+.+|+.++|.|.+.+.+. +
T Consensus 99 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 178 (268)
T 3pl6_D 99 VSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 178 (268)
T ss_dssp SEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCe
Confidence 4568999999999999999997631 1112222 2565543 344445667999999999988554 4
Q ss_pred eeEEeeCCeeCCCCCcEEE-------EecCC----eEEEEEccCCCCC-CeEEEEEEEeCCe
Q psy1095 96 WTSWSKDGKPATPNARVTI-------REKED----LRFLEISEVTLED-AGLYTIKVENNYG 145 (325)
Q Consensus 96 ~v~W~~~~~~~~~~~~~~~-------~~~~~----~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 145 (325)
.++|+++|..+........ ...++ ...|.|.....+| .|.|+|.+.+...
T Consensus 179 ~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 179 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp EEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 8999999988754321100 00111 1346777776676 9999999988654
No 500
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.32 E-value=2.6e-11 Score=108.39 Aligned_cols=92 Identities=27% Similarity=0.489 Sum_probs=86.3
Q ss_pred CCCeeEecCCceEecCCCeEEEEEEEEecCCCeeEEeeCCeeCCCCCcEEEEecCCeEEEEEccCCCCCCeEEEEEEEeC
Q psy1095 64 SSPRFYAVPHNKICDLGDTVRFQCSVTGQPAPWTSWSKDGKPATPNARVTIREKEDLRFLEISEVTLEDAGLYTIKVENN 143 (325)
Q Consensus 64 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 143 (325)
..|.+...+....+.+|+++.|.|.+.|.|.|.++|++++.++..+.++.+...+...+|.|.++..+|+|.|+|++.|.
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 56888888888899999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred CeeEEEEEEEEE
Q psy1095 144 YGSVEATARLEI 155 (325)
Q Consensus 144 ~~~~~~~~~l~v 155 (325)
.|..+..+.|.|
T Consensus 561 ~G~~~~~v~l~V 572 (573)
T 3uto_A 561 YGTKEEIVFLNV 572 (573)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999999888876
Done!