Query psy10953
Match_columns 181
No_of_seqs 132 out of 1199
Neff 10.2
Searched_HMMs 46136
Date Fri Aug 16 22:41:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10953.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10953hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272|consensus 100.0 2.9E-32 6.3E-37 204.2 10.4 167 3-169 253-429 (459)
2 KOG0271|consensus 100.0 1.8E-30 3.9E-35 193.0 16.5 165 4-169 108-287 (480)
3 KOG0279|consensus 100.0 1.5E-29 3.3E-34 181.2 19.6 165 4-168 56-232 (315)
4 KOG0272|consensus 100.0 3.6E-30 7.9E-35 193.0 13.6 154 3-156 295-458 (459)
5 KOG0263|consensus 100.0 3.4E-29 7.4E-34 199.4 15.2 156 4-159 486-650 (707)
6 KOG0263|consensus 100.0 7.8E-29 1.7E-33 197.3 16.8 161 5-165 445-614 (707)
7 KOG0315|consensus 100.0 1.7E-27 3.8E-32 168.6 19.2 166 3-169 75-299 (311)
8 KOG0286|consensus 100.0 3.4E-27 7.3E-32 170.3 20.5 165 4-168 48-269 (343)
9 KOG0279|consensus 100.0 1.8E-27 3.8E-32 170.7 18.7 161 3-164 97-268 (315)
10 KOG0286|consensus 100.0 2.3E-26 5E-31 166.0 19.6 162 7-169 141-314 (343)
11 KOG0266|consensus 100.0 4.3E-26 9.3E-31 181.5 22.1 164 5-168 197-374 (456)
12 KOG0271|consensus 99.9 3.2E-26 7E-31 170.5 16.1 159 3-161 149-442 (480)
13 KOG0266|consensus 99.9 2.2E-25 4.7E-30 177.5 20.6 152 11-162 159-322 (456)
14 KOG0284|consensus 99.9 5.1E-27 1.1E-31 175.6 10.5 160 12-171 181-350 (464)
15 KOG0291|consensus 99.9 1E-24 2.2E-29 173.8 19.5 164 4-167 343-559 (893)
16 KOG0273|consensus 99.9 1.1E-24 2.3E-29 165.7 17.9 160 10-170 234-494 (524)
17 KOG0285|consensus 99.9 3E-24 6.4E-29 159.0 18.7 157 7-163 147-312 (460)
18 KOG0319|consensus 99.9 3.2E-25 7E-30 176.0 14.4 157 8-164 460-625 (775)
19 KOG0275|consensus 99.9 8.2E-26 1.8E-30 165.8 8.9 152 13-164 215-384 (508)
20 KOG0645|consensus 99.9 1.4E-23 3E-28 150.3 19.4 158 2-159 5-181 (312)
21 PTZ00421 coronin; Provisional 99.9 2.4E-23 5.2E-28 166.3 22.5 154 7-160 71-247 (493)
22 PTZ00420 coronin; Provisional 99.9 5.9E-23 1.3E-27 165.4 24.3 156 4-159 67-249 (568)
23 KOG0295|consensus 99.9 1.3E-23 2.8E-28 155.5 18.4 165 3-167 185-373 (406)
24 KOG0645|consensus 99.9 2.6E-23 5.5E-28 148.9 19.3 148 10-157 60-224 (312)
25 KOG0265|consensus 99.9 2.8E-23 6E-28 150.5 17.6 170 2-171 38-217 (338)
26 KOG0284|consensus 99.9 6.9E-25 1.5E-29 164.3 9.0 161 7-167 134-303 (464)
27 KOG0306|consensus 99.9 2.2E-23 4.7E-28 166.2 17.5 151 11-161 508-667 (888)
28 KOG0278|consensus 99.9 4.3E-23 9.4E-28 146.6 16.9 168 7-176 139-315 (334)
29 KOG0296|consensus 99.9 1.1E-22 2.4E-27 150.7 19.3 165 3-167 56-229 (399)
30 KOG0291|consensus 99.9 9.4E-23 2E-27 162.6 20.1 172 3-174 299-482 (893)
31 KOG0315|consensus 99.9 3.3E-23 7.2E-28 147.0 14.4 137 23-160 10-156 (311)
32 cd00200 WD40 WD40 domain, foun 99.9 1E-21 2.2E-26 144.8 22.3 163 4-166 2-173 (289)
33 KOG0273|consensus 99.9 1.7E-22 3.6E-27 153.9 17.9 156 3-158 351-523 (524)
34 KOG0276|consensus 99.9 5.9E-23 1.3E-27 161.1 15.8 159 2-160 88-259 (794)
35 PTZ00421 coronin; Provisional 99.9 1.3E-21 2.9E-26 156.3 23.5 166 3-168 117-300 (493)
36 KOG0282|consensus 99.9 6.9E-24 1.5E-28 161.7 9.6 161 3-163 206-377 (503)
37 KOG1446|consensus 99.9 1.5E-21 3.3E-26 142.2 21.2 163 4-168 93-272 (311)
38 KOG0640|consensus 99.9 4.7E-23 1E-27 150.4 13.1 170 4-173 165-350 (430)
39 KOG0282|consensus 99.9 7.9E-23 1.7E-27 155.9 14.0 160 3-163 250-467 (503)
40 cd00200 WD40 WD40 domain, foun 99.9 6E-21 1.3E-25 140.7 23.2 164 4-167 86-258 (289)
41 KOG0283|consensus 99.9 1E-22 2.2E-27 163.6 14.6 153 6-159 261-482 (712)
42 KOG0295|consensus 99.9 4.8E-22 1E-26 147.3 16.4 154 3-156 227-404 (406)
43 KOG0292|consensus 99.9 1.6E-22 3.5E-27 163.8 14.4 165 4-169 2-175 (1202)
44 KOG0265|consensus 99.9 1.3E-21 2.7E-26 142.0 17.4 170 7-176 86-268 (338)
45 KOG0318|consensus 99.9 3E-21 6.5E-26 148.9 20.4 160 7-166 143-358 (603)
46 PTZ00420 coronin; Provisional 99.9 4.7E-21 1E-25 154.5 22.3 138 29-166 50-205 (568)
47 PLN00181 protein SPA1-RELATED; 99.9 7.4E-21 1.6E-25 160.8 23.4 157 4-162 568-742 (793)
48 KOG0293|consensus 99.9 2.6E-21 5.7E-26 145.6 16.3 165 5-169 263-481 (519)
49 KOG0285|consensus 99.9 1E-21 2.2E-26 145.7 13.6 160 5-165 187-355 (460)
50 KOG0293|consensus 99.9 1.8E-21 3.8E-26 146.6 14.9 157 6-163 219-389 (519)
51 PLN00181 protein SPA1-RELATED; 99.9 2.1E-20 4.6E-25 158.1 23.3 152 9-161 481-651 (793)
52 KOG0310|consensus 99.9 1.6E-21 3.5E-26 148.9 14.3 153 10-163 67-230 (487)
53 KOG0316|consensus 99.9 8.9E-21 1.9E-25 133.9 16.8 170 3-172 9-227 (307)
54 KOG0289|consensus 99.9 1.3E-20 2.8E-25 142.6 18.7 150 7-156 299-460 (506)
55 KOG0318|consensus 99.9 2E-20 4.4E-25 144.4 20.1 155 10-164 58-271 (603)
56 KOG0276|consensus 99.9 2.5E-21 5.4E-26 152.0 14.9 166 3-168 47-225 (794)
57 KOG0313|consensus 99.9 5.9E-21 1.3E-25 142.2 15.8 153 3-158 252-418 (423)
58 KOG0292|consensus 99.9 7.4E-21 1.6E-25 154.3 17.5 160 3-162 85-284 (1202)
59 KOG0277|consensus 99.9 1.3E-20 2.8E-25 134.2 16.2 155 14-168 63-232 (311)
60 KOG1407|consensus 99.9 1.3E-20 2.7E-25 134.6 16.1 149 14-163 67-266 (313)
61 KOG0640|consensus 99.9 6.4E-21 1.4E-25 139.3 14.7 156 6-161 107-294 (430)
62 KOG0319|consensus 99.9 2.6E-21 5.6E-26 154.0 13.7 156 5-160 405-579 (775)
63 KOG0306|consensus 99.9 8.9E-21 1.9E-25 151.4 16.4 161 7-168 450-632 (888)
64 KOG0275|consensus 99.9 3.4E-21 7.4E-26 141.6 11.4 156 13-169 265-433 (508)
65 KOG0647|consensus 99.9 3E-20 6.6E-25 135.0 15.9 151 7-159 22-185 (347)
66 KOG0267|consensus 99.9 3.6E-22 7.8E-27 158.7 6.4 161 3-163 62-231 (825)
67 KOG0289|consensus 99.9 3E-20 6.5E-25 140.6 16.0 157 4-160 254-421 (506)
68 KOG0310|consensus 99.9 4.9E-20 1.1E-24 140.9 17.3 154 5-159 104-269 (487)
69 KOG0643|consensus 99.9 7E-20 1.5E-24 131.3 16.6 153 7-159 48-318 (327)
70 KOG0973|consensus 99.9 4.1E-20 8.8E-25 152.2 17.0 152 10-161 12-204 (942)
71 KOG0639|consensus 99.9 8.7E-21 1.9E-25 146.0 12.2 159 3-163 412-586 (705)
72 KOG0296|consensus 99.9 2.7E-19 5.8E-24 132.8 19.4 165 4-168 99-273 (399)
73 KOG0277|consensus 99.8 3E-20 6.4E-25 132.4 13.0 157 3-159 96-266 (311)
74 KOG0281|consensus 99.8 9.2E-21 2E-25 140.3 10.3 157 4-168 230-398 (499)
75 KOG0283|consensus 99.8 9.6E-20 2.1E-24 146.7 15.9 163 3-167 361-541 (712)
76 KOG0973|consensus 99.8 1.1E-19 2.4E-24 149.7 16.4 159 2-160 120-357 (942)
77 KOG0269|consensus 99.8 5.9E-20 1.3E-24 147.1 14.0 153 6-158 128-296 (839)
78 KOG0772|consensus 99.8 8.6E-20 1.9E-24 140.8 13.9 154 7-160 163-396 (641)
79 KOG0643|consensus 99.8 7.7E-19 1.7E-23 126.0 17.6 158 1-159 1-221 (327)
80 KOG0316|consensus 99.8 1.6E-19 3.5E-24 127.5 13.5 111 8-120 56-176 (307)
81 KOG0302|consensus 99.8 1.7E-19 3.8E-24 134.5 14.3 159 2-160 202-380 (440)
82 KOG0305|consensus 99.8 7.7E-19 1.7E-23 137.7 18.0 156 7-162 297-465 (484)
83 KOG1274|consensus 99.8 9.2E-19 2E-23 142.4 18.8 150 10-159 95-263 (933)
84 KOG0641|consensus 99.8 1.6E-18 3.4E-23 122.2 17.4 151 10-160 88-305 (350)
85 KOG0264|consensus 99.8 4.6E-19 9.9E-24 134.4 15.2 154 6-159 172-348 (422)
86 KOG0274|consensus 99.8 1.3E-18 2.7E-23 140.0 18.5 150 6-160 244-402 (537)
87 KOG0281|consensus 99.8 1.2E-19 2.5E-24 134.6 11.3 154 10-171 196-361 (499)
88 KOG0294|consensus 99.8 1.3E-18 2.8E-23 127.2 16.2 154 2-158 34-197 (362)
89 KOG0305|consensus 99.8 1.5E-18 3.2E-23 136.1 17.6 153 11-165 217-383 (484)
90 KOG1273|consensus 99.8 1.2E-18 2.7E-23 127.6 14.6 145 14-158 26-226 (405)
91 KOG0268|consensus 99.8 2.3E-19 5E-24 133.3 10.9 165 3-168 179-355 (433)
92 KOG1539|consensus 99.8 5.1E-18 1.1E-22 137.1 19.1 147 12-158 449-648 (910)
93 KOG1446|consensus 99.8 9.5E-18 2.1E-22 122.5 18.8 149 10-159 13-171 (311)
94 KOG0288|consensus 99.8 5.5E-19 1.2E-23 133.0 12.2 165 5-169 213-428 (459)
95 KOG0646|consensus 99.8 1.8E-18 3.8E-23 131.9 15.0 149 10-158 80-247 (476)
96 KOG0308|consensus 99.8 3.6E-19 7.7E-24 140.4 11.2 156 4-159 66-244 (735)
97 KOG0772|consensus 99.8 5.5E-19 1.2E-23 136.4 11.9 156 9-164 266-451 (641)
98 KOG0269|consensus 99.8 2.9E-19 6.3E-24 143.2 10.6 145 16-160 92-252 (839)
99 KOG0264|consensus 99.8 2.6E-18 5.6E-23 130.4 15.2 155 4-158 220-404 (422)
100 KOG2096|consensus 99.8 4.7E-18 1E-22 124.8 15.7 150 10-161 186-405 (420)
101 KOG0278|consensus 99.8 7.2E-19 1.6E-23 125.3 10.6 152 14-166 103-262 (334)
102 KOG1063|consensus 99.8 4E-18 8.6E-23 135.3 15.4 156 3-158 517-699 (764)
103 KOG0294|consensus 99.8 2.4E-17 5.3E-22 120.6 18.1 158 3-160 75-283 (362)
104 KOG4283|consensus 99.8 5.2E-18 1.1E-22 123.4 14.2 156 8-164 98-282 (397)
105 KOG0299|consensus 99.8 1E-17 2.2E-22 127.6 16.3 159 9-168 200-366 (479)
106 KOG1036|consensus 99.8 2.1E-17 4.5E-22 120.5 16.9 146 10-159 12-164 (323)
107 KOG0308|consensus 99.8 8.9E-18 1.9E-22 132.6 15.5 156 4-159 110-286 (735)
108 KOG0639|consensus 99.8 1.5E-18 3.3E-23 133.8 11.0 146 12-157 510-703 (705)
109 KOG0274|consensus 99.8 1.7E-17 3.8E-22 133.4 17.4 159 4-169 284-452 (537)
110 KOG2096|consensus 99.8 1.2E-17 2.6E-22 122.6 14.7 152 7-158 82-308 (420)
111 KOG0299|consensus 99.8 1.1E-17 2.3E-22 127.5 14.1 166 4-170 135-327 (479)
112 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 2.7E-16 5.8E-21 118.2 21.6 155 14-169 117-290 (300)
113 KOG0288|consensus 99.8 2.3E-17 5E-22 124.3 15.2 140 14-156 305-459 (459)
114 KOG1407|consensus 99.8 4.8E-17 1E-21 116.5 15.8 140 10-149 146-293 (313)
115 KOG0300|consensus 99.8 2.3E-17 5.1E-22 121.3 14.3 157 3-160 264-430 (481)
116 PF08662 eIF2A: Eukaryotic tra 99.8 4.2E-16 9.1E-21 111.0 19.6 148 14-164 8-184 (194)
117 KOG2055|consensus 99.8 5.4E-17 1.2E-21 123.9 15.6 147 12-158 345-512 (514)
118 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 7.1E-16 1.5E-20 115.9 21.6 150 14-164 33-193 (300)
119 KOG0301|consensus 99.8 6.4E-17 1.4E-21 128.6 16.0 147 6-159 135-289 (745)
120 KOG1332|consensus 99.8 3.6E-17 7.9E-22 116.1 13.0 149 12-160 12-195 (299)
121 KOG0313|consensus 99.8 7.1E-17 1.5E-21 120.6 15.1 156 4-160 137-332 (423)
122 KOG0646|consensus 99.7 9.2E-17 2E-21 122.6 15.5 156 8-163 120-312 (476)
123 KOG1332|consensus 99.7 3.1E-17 6.7E-22 116.5 12.0 157 2-158 47-241 (299)
124 KOG0270|consensus 99.7 1.4E-16 2.9E-21 121.1 16.1 147 16-162 248-408 (463)
125 KOG0301|consensus 99.7 1.4E-16 3E-21 126.7 15.9 151 3-158 93-249 (745)
126 KOG2055|consensus 99.7 1.6E-16 3.5E-21 121.3 15.6 157 3-159 249-418 (514)
127 KOG0771|consensus 99.7 1.4E-16 3E-21 120.3 14.1 144 15-159 148-355 (398)
128 KOG4328|consensus 99.7 7.6E-17 1.6E-21 122.9 12.6 154 4-157 227-398 (498)
129 KOG0300|consensus 99.7 2.7E-17 5.8E-22 121.0 9.6 153 7-159 144-345 (481)
130 KOG2048|consensus 99.7 5.2E-16 1.1E-20 123.1 17.4 158 2-160 101-277 (691)
131 KOG0267|consensus 99.7 1.8E-17 3.9E-22 132.3 8.9 155 9-163 26-189 (825)
132 KOG0647|consensus 99.7 5.3E-16 1.1E-20 113.1 15.7 151 9-160 70-283 (347)
133 KOG0641|consensus 99.7 1.4E-15 3E-20 107.4 16.9 138 21-158 192-349 (350)
134 KOG0303|consensus 99.7 2.3E-16 5.1E-21 118.6 13.4 152 7-158 77-249 (472)
135 KOG0321|consensus 99.7 4.9E-16 1.1E-20 122.7 14.5 153 7-159 96-302 (720)
136 KOG1408|consensus 99.7 8.1E-16 1.8E-20 123.2 14.4 158 7-164 455-677 (1080)
137 KOG1036|consensus 99.7 3.4E-15 7.3E-20 109.1 16.4 157 5-164 88-268 (323)
138 KOG1009|consensus 99.7 4.5E-16 9.7E-21 117.2 12.0 153 10-162 12-199 (434)
139 KOG4283|consensus 99.7 1.6E-15 3.4E-20 110.7 14.2 147 13-159 45-220 (397)
140 KOG1538|consensus 99.7 3.1E-16 6.8E-21 124.8 11.4 157 13-172 14-176 (1081)
141 KOG2110|consensus 99.7 2.6E-14 5.6E-19 106.7 17.9 145 12-159 88-249 (391)
142 KOG4378|consensus 99.7 1.1E-14 2.3E-19 112.6 15.9 156 5-160 115-282 (673)
143 KOG1445|consensus 99.6 9E-16 1.9E-20 121.7 9.8 146 13-158 629-798 (1012)
144 KOG0268|consensus 99.6 3.2E-15 7E-20 111.4 11.7 156 3-160 101-304 (433)
145 KOG1273|consensus 99.6 2.3E-14 4.9E-19 105.4 15.8 165 8-172 62-294 (405)
146 KOG1007|consensus 99.6 2.3E-14 5E-19 104.3 15.6 144 13-158 125-289 (370)
147 KOG0302|consensus 99.6 6.9E-15 1.5E-19 110.2 13.2 138 22-159 164-333 (440)
148 KOG2394|consensus 99.6 1.2E-15 2.6E-20 118.6 9.3 94 3-97 282-384 (636)
149 KOG2048|consensus 99.6 1.2E-13 2.6E-18 109.9 20.3 155 9-164 23-190 (691)
150 KOG2445|consensus 99.6 1.6E-13 3.4E-18 100.6 18.8 149 8-157 56-317 (361)
151 KOG0642|consensus 99.6 2E-14 4.4E-19 112.2 14.9 160 2-161 335-564 (577)
152 KOG0303|consensus 99.6 4E-15 8.7E-20 112.0 10.4 145 22-166 43-211 (472)
153 KOG1274|consensus 99.6 5.1E-14 1.1E-18 115.3 17.5 152 17-168 60-228 (933)
154 PRK02889 tolB translocation pr 99.6 1.4E-13 3.1E-18 109.3 19.7 161 7-168 191-370 (427)
155 PRK03629 tolB translocation pr 99.6 3E-13 6.6E-18 107.4 21.5 162 5-167 192-372 (429)
156 KOG0322|consensus 99.6 7.8E-15 1.7E-19 105.5 9.9 132 26-157 168-322 (323)
157 KOG2106|consensus 99.6 1.7E-13 3.8E-18 106.1 17.9 143 10-156 367-519 (626)
158 PRK05137 tolB translocation pr 99.6 5.7E-13 1.2E-17 106.1 21.5 157 5-162 195-370 (435)
159 KOG2394|consensus 99.6 1.4E-14 3E-19 112.8 11.8 155 21-175 183-379 (636)
160 PRK01742 tolB translocation pr 99.6 1.2E-13 2.6E-18 109.8 17.5 156 6-165 198-368 (429)
161 KOG1034|consensus 99.6 1.1E-13 2.4E-18 102.2 15.8 150 10-160 37-213 (385)
162 KOG2106|consensus 99.6 2.6E-13 5.5E-18 105.2 18.4 151 10-162 245-481 (626)
163 PRK04922 tolB translocation pr 99.6 3.9E-13 8.4E-18 107.0 19.8 161 5-166 197-376 (433)
164 KOG0649|consensus 99.6 3.4E-13 7.3E-18 96.3 17.2 144 11-159 114-275 (325)
165 COG2319 FOG: WD40 repeat [Gene 99.6 1.6E-12 3.4E-17 100.2 22.8 162 4-166 148-322 (466)
166 KOG1034|consensus 99.6 1.4E-14 3E-19 106.9 9.9 145 11-157 89-278 (385)
167 KOG0650|consensus 99.6 1.3E-13 2.8E-18 108.7 15.9 151 8-160 397-639 (733)
168 KOG0649|consensus 99.6 2.9E-13 6.3E-18 96.6 16.1 152 14-168 13-196 (325)
169 KOG1523|consensus 99.6 1.4E-13 3E-18 101.3 14.9 152 6-157 5-175 (361)
170 KOG1445|consensus 99.6 1.2E-14 2.6E-19 115.4 10.0 142 19-161 587-753 (1012)
171 KOG0307|consensus 99.6 1.4E-14 3.1E-19 120.7 10.1 169 4-172 109-298 (1049)
172 KOG1188|consensus 99.6 9.5E-14 2.1E-18 102.9 13.4 137 24-160 41-198 (376)
173 KOG2445|consensus 99.6 6.1E-13 1.3E-17 97.6 17.0 157 4-160 5-209 (361)
174 TIGR02800 propeller_TolB tol-p 99.6 1.9E-12 4.1E-17 102.3 20.9 158 7-165 185-361 (417)
175 KOG0290|consensus 99.6 1.2E-13 2.7E-18 100.6 12.7 147 14-160 153-320 (364)
176 KOG1063|consensus 99.6 1.9E-13 4.1E-18 109.1 14.7 156 3-158 564-763 (764)
177 KOG1408|consensus 99.6 2.2E-13 4.8E-18 109.5 15.0 156 4-159 540-714 (1080)
178 KOG2919|consensus 99.6 4.4E-13 9.5E-18 99.0 15.1 146 14-162 210-371 (406)
179 PRK03629 tolB translocation pr 99.5 1.7E-12 3.7E-17 103.2 19.6 152 13-166 244-414 (429)
180 KOG1007|consensus 99.5 2.9E-13 6.2E-18 98.6 13.6 149 11-160 170-363 (370)
181 KOG1272|consensus 99.5 2.4E-14 5.1E-19 109.8 8.4 142 13-156 211-360 (545)
182 PF08662 eIF2A: Eukaryotic tra 99.5 8.4E-13 1.8E-17 94.1 15.9 107 13-123 61-184 (194)
183 KOG1523|consensus 99.5 3.1E-13 6.7E-18 99.5 13.7 155 6-160 50-238 (361)
184 PRK11028 6-phosphogluconolacto 99.5 2.7E-12 5.9E-17 98.6 19.4 146 13-159 36-206 (330)
185 KOG1188|consensus 99.5 8.2E-13 1.8E-17 98.0 14.5 158 4-161 63-245 (376)
186 PRK11028 6-phosphogluconolacto 99.5 3.2E-12 7E-17 98.2 18.6 146 13-158 127-304 (330)
187 PRK00178 tolB translocation pr 99.5 8.1E-12 1.7E-16 99.3 21.2 162 5-167 192-372 (430)
188 KOG1009|consensus 99.5 1.3E-13 2.8E-18 104.2 9.9 144 4-147 58-249 (434)
189 PRK01742 tolB translocation pr 99.5 3E-12 6.6E-17 101.8 17.0 141 14-157 250-400 (429)
190 KOG0321|consensus 99.5 4.6E-13 1E-17 106.2 11.9 146 15-160 53-250 (720)
191 KOG4328|consensus 99.5 1.5E-12 3.2E-17 99.8 14.1 151 9-159 184-354 (498)
192 KOG2919|consensus 99.5 3.9E-12 8.4E-17 94.1 14.9 147 14-161 107-284 (406)
193 PRK04922 tolB translocation pr 99.5 1.4E-11 3.1E-16 98.1 19.4 152 13-166 249-419 (433)
194 KOG2111|consensus 99.5 1.5E-11 3.3E-16 90.6 17.8 145 13-160 96-258 (346)
195 PRK04792 tolB translocation pr 99.5 1.8E-11 3.8E-16 97.9 19.8 158 8-166 214-390 (448)
196 KOG0307|consensus 99.5 2.8E-13 6.1E-18 113.1 9.8 145 14-158 67-240 (1049)
197 KOG1310|consensus 99.5 4.8E-13 1E-17 104.8 10.5 151 7-157 46-230 (758)
198 PF02239 Cytochrom_D1: Cytochr 99.5 1.2E-10 2.6E-15 90.7 23.8 165 4-169 29-213 (369)
199 KOG4378|consensus 99.5 4.1E-13 8.9E-18 104.0 9.7 144 16-159 84-240 (673)
200 PRK01029 tolB translocation pr 99.5 2.2E-11 4.9E-16 96.7 19.1 158 11-168 230-413 (428)
201 KOG1538|consensus 99.4 7.6E-12 1.6E-16 100.3 15.8 154 3-157 45-292 (1081)
202 COG2319 FOG: WD40 repeat [Gene 99.4 1.4E-10 3E-15 89.3 22.6 158 7-164 61-235 (466)
203 KOG3881|consensus 99.4 9.8E-12 2.1E-16 93.7 15.2 153 4-159 142-321 (412)
204 PRK05137 tolB translocation pr 99.4 3.1E-11 6.7E-16 96.2 19.1 158 7-166 241-420 (435)
205 KOG0644|consensus 99.4 1.1E-13 2.3E-18 112.8 4.4 113 1-117 180-300 (1113)
206 KOG1524|consensus 99.4 1.6E-12 3.5E-17 101.7 10.4 129 9-139 102-238 (737)
207 KOG4227|consensus 99.4 1.4E-11 3E-16 93.4 14.3 146 14-159 59-226 (609)
208 KOG0642|consensus 99.4 6.8E-12 1.5E-16 98.3 12.7 150 14-163 297-524 (577)
209 KOG1539|consensus 99.4 2.6E-11 5.6E-16 98.9 16.2 136 25-160 174-320 (910)
210 KOG1963|consensus 99.4 3.4E-11 7.4E-16 98.5 17.0 161 14-174 208-394 (792)
211 KOG2110|consensus 99.4 1.5E-10 3.2E-15 86.9 18.8 159 1-159 116-331 (391)
212 PRK02889 tolB translocation pr 99.4 9E-11 2E-15 93.3 18.6 147 11-159 239-404 (427)
213 KOG4497|consensus 99.4 3.5E-11 7.6E-16 89.4 14.9 125 32-156 70-238 (447)
214 KOG2139|consensus 99.4 2.3E-11 4.9E-16 91.3 13.7 146 10-156 97-266 (445)
215 KOG2321|consensus 99.4 1.3E-11 2.8E-16 97.2 13.0 155 4-159 168-344 (703)
216 KOG0270|consensus 99.4 3.6E-11 7.7E-16 92.0 14.3 159 5-164 280-455 (463)
217 KOG1272|consensus 99.3 1.5E-11 3.2E-16 94.7 10.8 155 9-163 127-328 (545)
218 KOG1240|consensus 99.3 1.1E-10 2.4E-15 98.8 16.6 161 4-164 1041-1231(1431)
219 KOG0290|consensus 99.3 5.8E-11 1.3E-15 86.8 13.2 148 6-154 191-361 (364)
220 KOG0771|consensus 99.3 4.1E-11 8.9E-16 91.0 12.0 113 57-170 148-323 (398)
221 KOG1524|consensus 99.3 4.3E-11 9.4E-16 93.8 12.0 132 25-158 77-216 (737)
222 KOG2321|consensus 99.3 2.9E-10 6.4E-15 89.8 16.4 161 11-171 51-271 (703)
223 PRK00178 tolB translocation pr 99.3 7.5E-10 1.6E-14 88.1 19.2 151 14-166 245-414 (430)
224 TIGR02800 propeller_TolB tol-p 99.3 7.8E-10 1.7E-14 87.5 19.0 145 13-159 235-398 (417)
225 KOG0650|consensus 99.3 7.6E-11 1.7E-15 93.4 12.8 150 7-157 517-679 (733)
226 KOG1587|consensus 99.3 1.5E-10 3.2E-15 93.5 14.7 150 10-159 241-473 (555)
227 KOG1517|consensus 99.3 1.4E-10 3E-15 97.1 14.8 144 16-160 1170-1335(1387)
228 PRK01029 tolB translocation pr 99.3 1.3E-09 2.8E-14 86.7 19.0 160 7-167 180-368 (428)
229 KOG1963|consensus 99.2 6.5E-10 1.4E-14 91.2 16.2 148 15-163 164-327 (792)
230 KOG2139|consensus 99.2 9.8E-10 2.1E-14 82.6 15.9 153 11-164 195-389 (445)
231 PRK04792 tolB translocation pr 99.2 2.2E-09 4.8E-14 85.9 19.1 150 14-165 264-432 (448)
232 PLN02919 haloacid dehalogenase 99.2 2.9E-09 6.3E-14 92.8 20.7 148 14-162 685-892 (1057)
233 KOG1310|consensus 99.2 4.7E-11 1E-15 93.8 8.3 114 46-159 43-179 (758)
234 KOG0974|consensus 99.2 3.3E-10 7.1E-15 94.4 13.4 140 17-159 139-289 (967)
235 KOG3914|consensus 99.2 5.8E-10 1.3E-14 84.5 13.5 150 13-164 64-229 (390)
236 PF02239 Cytochrom_D1: Cytochr 99.2 8.4E-09 1.8E-13 80.5 20.5 137 24-160 6-160 (369)
237 PRK04043 tolB translocation pr 99.2 1.7E-08 3.7E-13 80.1 21.7 153 13-168 189-367 (419)
238 PRK04043 tolB translocation pr 99.2 1.1E-08 2.3E-13 81.2 20.4 160 6-167 227-409 (419)
239 KOG4547|consensus 99.2 2.2E-09 4.8E-14 84.8 15.7 151 20-172 2-186 (541)
240 KOG1517|consensus 99.2 5.8E-10 1.3E-14 93.5 12.8 137 22-160 1220-1383(1387)
241 KOG0974|consensus 99.2 2.2E-09 4.7E-14 89.6 15.5 140 17-158 93-246 (967)
242 KOG0644|consensus 99.2 4.5E-11 9.7E-16 97.8 5.5 163 3-169 224-437 (1113)
243 KOG4227|consensus 99.1 1.6E-09 3.5E-14 82.4 12.4 110 52-161 55-182 (609)
244 KOG3881|consensus 99.1 1.5E-09 3.3E-14 82.1 12.1 125 15-139 206-342 (412)
245 PF10282 Lactonase: Lactonase, 99.1 6.1E-08 1.3E-12 75.1 21.2 147 12-158 144-322 (345)
246 TIGR02658 TTQ_MADH_Hv methylam 99.1 3.2E-07 7E-12 70.8 24.2 151 15-166 108-338 (352)
247 PF10282 Lactonase: Lactonase, 99.1 9E-08 2E-12 74.2 20.8 145 14-158 39-222 (345)
248 KOG2111|consensus 99.1 2.5E-08 5.4E-13 73.9 16.4 140 6-159 176-323 (346)
249 KOG0322|consensus 99.1 6.2E-10 1.3E-14 80.5 7.7 109 8-116 202-322 (323)
250 KOG1587|consensus 99.1 9.6E-09 2.1E-13 83.2 15.0 149 11-159 347-517 (555)
251 COG2706 3-carboxymuconate cycl 99.1 7.4E-08 1.6E-12 72.5 18.4 151 10-160 38-223 (346)
252 KOG1354|consensus 99.0 1.7E-08 3.7E-13 75.7 13.6 151 9-161 162-362 (433)
253 COG4946 Uncharacterized protei 99.0 5.6E-08 1.2E-12 75.8 16.9 136 11-147 359-507 (668)
254 KOG2315|consensus 99.0 9.2E-08 2E-12 75.6 17.5 146 11-158 217-390 (566)
255 PF15492 Nbas_N: Neuroblastoma 99.0 3E-07 6.6E-12 67.5 18.3 145 15-159 47-260 (282)
256 KOG0280|consensus 99.0 5.5E-08 1.2E-12 71.5 13.8 139 11-149 121-276 (339)
257 KOG1064|consensus 98.9 5.2E-09 1.1E-13 91.9 9.6 139 14-161 2211-2401(2439)
258 KOG4547|consensus 98.9 1.1E-07 2.4E-12 75.4 15.7 136 22-159 69-221 (541)
259 COG4946 Uncharacterized protei 98.9 1.5E-07 3.2E-12 73.6 16.0 81 4-84 394-478 (668)
260 KOG4532|consensus 98.9 4.1E-07 8.9E-12 66.4 16.5 149 12-161 159-334 (344)
261 KOG1240|consensus 98.9 3.3E-07 7.1E-12 78.5 18.0 156 13-168 1100-1283(1431)
262 PLN02919 haloacid dehalogenase 98.9 9.7E-07 2.1E-11 77.3 21.2 154 14-167 626-842 (1057)
263 PF07433 DUF1513: Protein of u 98.8 1.9E-06 4.1E-11 64.8 19.0 157 6-164 43-253 (305)
264 KOG2695|consensus 98.8 1.6E-08 3.4E-13 75.9 7.9 147 15-166 215-384 (425)
265 KOG4532|consensus 98.8 9.8E-07 2.1E-11 64.5 16.0 139 26-164 131-288 (344)
266 PF00400 WD40: WD domain, G-be 98.7 4E-08 8.6E-13 51.2 5.3 38 2-39 2-39 (39)
267 KOG4497|consensus 98.7 1.5E-07 3.2E-12 70.5 10.0 116 6-122 86-245 (447)
268 KOG0280|consensus 98.7 4.7E-07 1E-11 66.8 12.1 156 4-160 158-335 (339)
269 PF00400 WD40: WD domain, G-be 98.7 7.7E-08 1.7E-12 50.1 5.8 37 120-156 2-39 (39)
270 PF11768 DUF3312: Protein of u 98.7 3.3E-06 7.1E-11 67.6 16.5 73 87-160 259-331 (545)
271 COG2706 3-carboxymuconate cycl 98.7 1.2E-05 2.5E-10 61.0 18.3 146 14-159 147-322 (346)
272 PRK02888 nitrous-oxide reducta 98.7 5.2E-06 1.1E-10 67.9 17.6 114 33-147 296-450 (635)
273 KOG1334|consensus 98.7 1.3E-07 2.9E-12 73.7 8.1 155 5-159 136-313 (559)
274 KOG2041|consensus 98.7 5.7E-07 1.2E-11 73.6 11.8 150 10-159 13-187 (1189)
275 PF08450 SGL: SMP-30/Gluconola 98.6 2.9E-05 6.3E-10 57.3 19.9 137 16-158 4-164 (246)
276 PF08450 SGL: SMP-30/Gluconola 98.6 7E-05 1.5E-09 55.3 22.6 146 14-163 42-217 (246)
277 COG0823 TolB Periplasmic compo 98.6 4.6E-06 1E-10 66.2 15.6 159 8-167 189-367 (425)
278 KOG1275|consensus 98.6 2.6E-06 5.5E-11 71.3 14.2 137 19-157 183-341 (1118)
279 KOG3914|consensus 98.6 5.2E-07 1.1E-11 68.8 9.2 73 52-125 150-231 (390)
280 KOG1832|consensus 98.6 2.6E-07 5.6E-12 77.1 8.2 147 3-159 1093-1292(1516)
281 KOG2315|consensus 98.6 2.2E-06 4.7E-11 68.1 12.5 124 11-138 270-410 (566)
282 KOG1409|consensus 98.6 1.6E-06 3.4E-11 65.3 11.1 148 10-160 113-272 (404)
283 KOG4190|consensus 98.5 5.6E-07 1.2E-11 71.8 9.0 159 4-164 728-912 (1034)
284 TIGR02658 TTQ_MADH_Hv methylam 98.5 5.5E-05 1.2E-09 58.6 19.0 113 22-136 11-155 (352)
285 KOG2695|consensus 98.5 3E-07 6.5E-12 69.2 6.4 128 10-138 251-402 (425)
286 KOG1409|consensus 98.5 1.6E-05 3.4E-10 60.1 14.7 159 5-163 18-232 (404)
287 KOG1354|consensus 98.5 3.9E-06 8.4E-11 63.3 11.3 145 14-159 28-245 (433)
288 KOG0882|consensus 98.5 1.9E-06 4.1E-11 67.0 9.4 156 12-168 54-241 (558)
289 KOG2314|consensus 98.4 9.6E-06 2.1E-10 64.7 13.5 146 15-164 214-387 (698)
290 PF11768 DUF3312: Protein of u 98.4 9.3E-06 2E-10 65.1 13.2 105 14-118 208-330 (545)
291 PRK02888 nitrous-oxide reducta 98.4 2.9E-05 6.3E-10 63.6 15.8 142 17-159 198-405 (635)
292 COG5354 Uncharacterized protei 98.4 5.8E-05 1.3E-09 59.7 16.0 150 8-159 219-396 (561)
293 COG0823 TolB Periplasmic compo 98.4 7.4E-06 1.6E-10 65.1 11.3 133 15-148 241-389 (425)
294 COG5170 CDC55 Serine/threonine 98.3 2.3E-05 5E-10 58.7 12.0 149 8-158 169-367 (460)
295 KOG4714|consensus 98.3 2.6E-06 5.7E-11 62.0 6.9 140 20-159 98-255 (319)
296 PF13360 PQQ_2: PQQ-like domai 98.3 0.00014 3E-09 53.1 15.6 140 21-163 34-196 (238)
297 PF15492 Nbas_N: Neuroblastoma 98.3 0.00031 6.7E-09 51.9 16.9 146 15-161 1-191 (282)
298 KOG1912|consensus 98.3 6.5E-05 1.4E-09 62.4 14.6 142 14-157 18-185 (1062)
299 TIGR03300 assembly_YfgL outer 98.2 0.00013 2.8E-09 57.2 15.8 138 22-163 64-213 (377)
300 PF04762 IKI3: IKI3 family; I 98.2 0.0001 2.2E-09 64.1 16.0 144 15-160 260-458 (928)
301 PF04053 Coatomer_WDAD: Coatom 98.2 5.9E-05 1.3E-09 60.3 13.4 135 13-160 34-175 (443)
302 KOG2314|consensus 98.2 0.00014 2.9E-09 58.4 15.0 153 4-158 386-573 (698)
303 KOG1645|consensus 98.2 1.9E-05 4E-10 60.8 9.8 84 1-85 183-268 (463)
304 KOG1334|consensus 98.2 4.3E-06 9.3E-11 65.6 5.9 150 12-161 282-469 (559)
305 TIGR03300 assembly_YfgL outer 98.2 0.00025 5.4E-09 55.6 15.8 136 23-163 145-302 (377)
306 COG3391 Uncharacterized conser 98.1 0.002 4.3E-08 50.9 20.5 155 13-168 117-293 (381)
307 KOG2066|consensus 98.1 0.00015 3.3E-09 60.3 14.0 130 22-158 82-233 (846)
308 KOG2066|consensus 98.1 0.00024 5.3E-09 59.1 15.0 137 22-170 48-199 (846)
309 PF13360 PQQ_2: PQQ-like domai 98.1 0.00034 7.4E-09 51.0 14.5 138 22-163 75-235 (238)
310 KOG4714|consensus 98.1 3.6E-05 7.8E-10 56.2 8.6 63 56-118 182-255 (319)
311 KOG2041|consensus 98.0 5.8E-05 1.3E-09 62.3 10.2 101 56-156 17-143 (1189)
312 PF04762 IKI3: IKI3 family; I 98.0 0.00043 9.3E-09 60.3 15.8 141 15-157 213-378 (928)
313 KOG1064|consensus 98.0 3.7E-05 8.1E-10 68.8 8.7 106 55-161 2210-2369(2439)
314 COG3391 Uncharacterized conser 97.9 0.0041 8.9E-08 49.1 18.8 151 14-165 76-246 (381)
315 COG5354 Uncharacterized protei 97.9 0.0027 5.9E-08 50.6 16.9 147 11-159 173-349 (561)
316 PRK13616 lipoprotein LpqB; Pro 97.9 0.0007 1.5E-08 56.2 14.4 140 13-157 351-524 (591)
317 PF07433 DUF1513: Protein of u 97.9 0.0057 1.2E-07 46.4 18.6 133 15-149 102-277 (305)
318 PF08553 VID27: VID27 cytoplas 97.9 0.0012 2.7E-08 56.1 15.4 125 30-157 501-646 (794)
319 KOG3621|consensus 97.9 0.00014 3.1E-09 59.6 9.3 104 56-159 36-155 (726)
320 KOG1645|consensus 97.9 5.5E-05 1.2E-09 58.3 6.6 75 85-159 191-267 (463)
321 KOG1008|consensus 97.8 4.7E-06 1E-10 67.5 0.8 146 11-157 56-224 (783)
322 PF06977 SdiA-regulated: SdiA- 97.8 0.007 1.5E-07 44.8 19.4 152 9-162 19-204 (248)
323 KOG0309|consensus 97.8 0.00013 2.8E-09 60.4 8.2 151 8-159 64-233 (1081)
324 KOG1920|consensus 97.8 0.0029 6.2E-08 55.2 16.2 149 11-159 109-323 (1265)
325 KOG4640|consensus 97.8 0.00016 3.5E-09 58.7 8.4 77 10-87 19-96 (665)
326 KOG1275|consensus 97.8 0.00031 6.6E-09 59.4 10.2 131 22-156 146-294 (1118)
327 KOG3621|consensus 97.7 0.00041 8.8E-09 57.1 10.0 105 14-118 36-155 (726)
328 KOG1008|consensus 97.7 9.3E-06 2E-10 65.8 0.5 145 13-158 104-275 (783)
329 smart00320 WD40 WD40 repeats. 97.7 0.00011 2.4E-09 36.4 4.5 37 3-39 4-40 (40)
330 PF14783 BBS2_Mid: Ciliary BBS 97.7 0.0047 1E-07 39.7 14.1 95 14-112 2-109 (111)
331 PRK11138 outer membrane biogen 97.7 0.0018 3.9E-08 51.2 13.2 139 22-162 119-278 (394)
332 PF00930 DPPIV_N: Dipeptidyl p 97.7 0.0038 8.3E-08 48.7 14.6 160 5-166 36-276 (353)
333 COG3386 Gluconolactonase [Carb 97.7 0.0049 1.1E-07 47.1 14.7 133 15-148 114-275 (307)
334 KOG3617|consensus 97.7 0.00037 8E-09 58.8 9.0 73 11-83 59-131 (1416)
335 PF02897 Peptidase_S9_N: Proly 97.6 0.023 4.9E-07 45.2 21.2 104 15-119 127-262 (414)
336 KOG4190|consensus 97.6 0.0002 4.4E-09 57.6 6.4 146 8-157 781-947 (1034)
337 PRK11138 outer membrane biogen 97.6 0.0057 1.2E-07 48.4 14.2 129 23-157 256-393 (394)
338 TIGR02604 Piru_Ver_Nterm putat 97.6 0.012 2.6E-07 46.2 15.9 141 4-147 4-202 (367)
339 KOG2114|consensus 97.6 0.0067 1.4E-07 51.3 14.8 142 19-161 31-204 (933)
340 smart00320 WD40 WD40 repeats. 97.5 0.00052 1.1E-08 33.8 5.6 28 54-81 13-40 (40)
341 COG5170 CDC55 Serine/threonine 97.5 0.00099 2.1E-08 50.2 8.9 149 10-159 25-253 (460)
342 KOG4640|consensus 97.5 0.00081 1.8E-08 54.8 8.6 75 89-164 22-98 (665)
343 PF04841 Vps16_N: Vps16, N-ter 97.5 0.035 7.5E-07 44.3 20.7 66 16-83 33-109 (410)
344 cd00216 PQQ_DH Dehydrogenases 97.5 0.023 5E-07 46.4 16.9 146 17-163 222-429 (488)
345 KOG3617|consensus 97.5 0.00028 6.1E-09 59.4 5.8 101 15-117 19-131 (1416)
346 KOG0882|consensus 97.5 0.00038 8.1E-09 54.6 6.1 138 22-159 19-175 (558)
347 KOG0309|consensus 97.5 0.0012 2.6E-08 55.0 9.2 146 14-161 27-191 (1081)
348 COG3490 Uncharacterized protei 97.4 0.024 5.2E-07 42.6 15.0 147 17-163 119-315 (366)
349 KOG1920|consensus 97.4 0.019 4.2E-07 50.4 16.5 144 12-157 69-273 (1265)
350 KOG2114|consensus 97.4 0.012 2.7E-07 49.8 15.0 138 23-161 77-246 (933)
351 PF00780 CNH: CNH domain; Int 97.4 0.029 6.2E-07 42.0 18.3 142 20-168 4-175 (275)
352 PF06433 Me-amine-dh_H: Methyl 97.4 0.04 8.6E-07 42.5 17.0 145 24-168 148-330 (342)
353 PF03178 CPSF_A: CPSF A subuni 97.4 0.027 6E-07 43.2 15.6 136 14-154 91-261 (321)
354 PF15390 DUF4613: Domain of un 97.3 0.018 3.8E-07 47.2 14.3 136 14-157 22-185 (671)
355 KOG4649|consensus 97.3 0.043 9.3E-07 40.7 14.9 64 22-85 62-125 (354)
356 KOG1912|consensus 97.2 0.00079 1.7E-08 56.2 6.0 94 25-119 439-553 (1062)
357 PF06433 Me-amine-dh_H: Methyl 97.2 0.015 3.4E-07 44.7 12.5 124 33-160 17-167 (342)
358 PF14583 Pectate_lyase22: Olig 97.2 0.017 3.7E-07 45.3 12.4 143 17-159 41-223 (386)
359 cd00216 PQQ_DH Dehydrogenases 97.2 0.067 1.4E-06 43.7 16.4 140 24-163 111-324 (488)
360 PF12894 Apc4_WD40: Anaphase-p 97.2 0.0025 5.5E-08 34.4 5.5 35 127-162 10-44 (47)
361 PF00930 DPPIV_N: Dipeptidyl p 97.1 0.0011 2.4E-08 51.7 5.7 87 20-108 1-121 (353)
362 KOG2444|consensus 97.1 0.0029 6.3E-08 45.6 7.0 129 28-159 35-178 (238)
363 PF06977 SdiA-regulated: SdiA- 97.1 0.068 1.5E-06 39.7 16.2 141 13-155 66-247 (248)
364 PRK13616 lipoprotein LpqB; Pro 97.0 0.014 3.1E-07 48.7 11.5 97 55-154 351-472 (591)
365 KOG4649|consensus 97.0 0.077 1.7E-06 39.4 17.1 117 20-138 19-145 (354)
366 KOG2395|consensus 97.0 0.022 4.8E-07 46.0 11.9 128 27-157 350-499 (644)
367 PF04053 Coatomer_WDAD: Coatom 97.0 0.043 9.4E-07 44.2 13.6 55 23-81 117-171 (443)
368 COG3386 Gluconolactonase [Carb 96.9 0.1 2.2E-06 40.0 14.6 136 19-159 32-194 (307)
369 PF12894 Apc4_WD40: Anaphase-p 96.9 0.0037 8E-08 33.8 4.9 31 11-41 11-41 (47)
370 PF12234 Rav1p_C: RAVE protein 96.9 0.04 8.6E-07 46.1 12.9 108 7-116 25-155 (631)
371 KOG4499|consensus 96.8 0.11 2.5E-06 38.0 13.1 81 57-137 161-262 (310)
372 PF14783 BBS2_Mid: Ciliary BBS 96.8 0.067 1.5E-06 34.4 12.9 91 60-153 9-109 (111)
373 KOG2079|consensus 96.7 0.094 2E-06 45.9 13.5 67 13-81 132-201 (1206)
374 PF10647 Gmad1: Lipoprotein Lp 96.6 0.18 4E-06 37.5 15.7 134 13-149 25-186 (253)
375 PHA02713 hypothetical protein; 96.6 0.051 1.1E-06 45.2 11.5 137 21-160 350-535 (557)
376 PF14583 Pectate_lyase22: Olig 96.5 0.29 6.3E-06 38.6 16.8 144 14-157 190-380 (386)
377 KOG1832|consensus 96.5 0.0043 9.3E-08 53.0 4.7 104 56-162 1104-1218(1516)
378 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.4 0.47 1E-05 39.3 17.8 147 17-163 239-495 (527)
379 PF07569 Hira: TUP1-like enhan 96.3 0.078 1.7E-06 38.6 9.8 35 129-164 67-101 (219)
380 COG3204 Uncharacterized protei 96.3 0.34 7.4E-06 36.7 15.7 152 8-159 82-264 (316)
381 COG3490 Uncharacterized protei 96.1 0.4 8.7E-06 36.3 15.0 132 15-146 71-243 (366)
382 PF08596 Lgl_C: Lethal giant l 96.1 0.53 1.2E-05 37.5 17.3 160 3-163 78-295 (395)
383 PF08553 VID27: VID27 cytoplas 96.1 0.025 5.4E-07 48.4 7.2 71 10-82 576-646 (794)
384 PF14655 RAB3GAP2_N: Rab3 GTPa 96.1 0.2 4.4E-06 40.0 11.8 49 6-54 302-350 (415)
385 PF02897 Peptidase_S9_N: Proly 95.9 0.31 6.8E-06 38.7 12.5 103 58-160 128-262 (414)
386 TIGR03606 non_repeat_PQQ dehyd 95.8 0.8 1.7E-05 37.1 18.6 62 4-65 22-90 (454)
387 KOG2079|consensus 95.8 0.035 7.6E-07 48.4 6.6 97 16-115 92-201 (1206)
388 PF05694 SBP56: 56kDa selenium 95.7 0.83 1.8E-05 36.7 14.9 134 14-147 183-392 (461)
389 PF05096 Glu_cyclase_2: Glutam 95.7 0.63 1.4E-05 34.8 14.1 129 45-176 35-178 (264)
390 PF10647 Gmad1: Lipoprotein Lp 95.6 0.67 1.4E-05 34.5 13.6 102 56-157 26-143 (253)
391 KOG2247|consensus 95.6 0.0029 6.2E-08 50.5 -0.4 132 16-150 39-180 (615)
392 PF14870 PSII_BNR: Photosynthe 95.5 0.84 1.8E-05 35.0 18.9 140 12-155 145-301 (302)
393 PF10168 Nup88: Nuclear pore c 95.5 0.69 1.5E-05 39.7 13.2 74 10-84 83-180 (717)
394 PF07676 PD40: WD40-like Beta 95.5 0.08 1.7E-06 27.0 5.1 34 5-38 2-38 (39)
395 PHA02713 hypothetical protein; 95.4 0.84 1.8E-05 38.1 13.5 138 21-159 302-489 (557)
396 PHA03098 kelch-like protein; P 95.4 0.8 1.7E-05 37.8 13.3 137 22-160 342-513 (534)
397 PF12234 Rav1p_C: RAVE protein 95.3 1.5 3.3E-05 37.0 15.0 95 62-158 38-156 (631)
398 PF10313 DUF2415: Uncharacteri 95.3 0.13 2.8E-06 27.1 5.4 29 14-42 3-34 (43)
399 PF08596 Lgl_C: Lethal giant l 95.3 0.85 1.8E-05 36.4 12.6 140 12-158 2-173 (395)
400 PF00780 CNH: CNH domain; Int 95.3 0.3 6.5E-06 36.5 9.6 95 63-159 5-123 (275)
401 PRK10115 protease 2; Provision 95.2 1.7 3.8E-05 37.2 18.3 102 13-116 128-254 (686)
402 PF10313 DUF2415: Uncharacteri 95.2 0.14 3E-06 27.0 5.4 30 89-118 2-34 (43)
403 KOG3630|consensus 95.2 0.46 9.9E-06 42.2 11.3 101 58-158 105-228 (1405)
404 PF03178 CPSF_A: CPSF A subuni 95.1 1.2 2.5E-05 34.3 17.4 132 23-159 42-203 (321)
405 COG4590 ABC-type uncharacteriz 95.1 0.096 2.1E-06 42.0 6.5 153 5-159 214-387 (733)
406 PF07995 GSDH: Glucose / Sorbo 95.1 1.2 2.7E-05 34.5 15.1 95 13-109 3-135 (331)
407 TIGR02276 beta_rpt_yvtn 40-res 95.0 0.18 4E-06 25.8 5.7 41 97-137 1-42 (42)
408 PHA03098 kelch-like protein; P 95.0 0.98 2.1E-05 37.3 12.6 137 21-159 293-465 (534)
409 PF05096 Glu_cyclase_2: Glutam 94.9 1.2 2.5E-05 33.4 17.7 147 16-166 49-211 (264)
410 PF14870 PSII_BNR: Photosynthe 94.9 1.3 2.9E-05 33.9 19.1 95 54-149 145-253 (302)
411 PF07569 Hira: TUP1-like enhan 94.8 0.32 6.9E-06 35.4 8.4 28 19-46 18-45 (219)
412 TIGR02276 beta_rpt_yvtn 40-res 94.8 0.24 5.1E-06 25.4 5.8 31 21-51 1-32 (42)
413 PF04841 Vps16_N: Vps16, N-ter 94.6 1.9 4.2E-05 34.5 14.0 53 13-65 218-271 (410)
414 COG5167 VID27 Protein involved 94.5 0.94 2E-05 37.1 10.7 133 22-157 478-631 (776)
415 PF12657 TFIIIC_delta: Transcr 94.3 0.52 1.1E-05 32.9 8.3 31 88-118 86-122 (173)
416 PHA02790 Kelch-like protein; P 94.1 2.8 6E-05 34.3 13.9 136 21-160 317-472 (480)
417 PF14655 RAB3GAP2_N: Rab3 GTPa 93.9 1.2 2.6E-05 35.7 10.4 78 89-166 309-406 (415)
418 KOG4441|consensus 93.9 2.3 5E-05 35.7 12.5 136 22-159 332-500 (571)
419 COG4257 Vgb Streptogramin lyas 93.7 2.3 5E-05 32.2 13.2 144 14-160 64-220 (353)
420 KOG2444|consensus 93.5 0.29 6.2E-06 35.6 5.7 73 98-170 69-144 (238)
421 KOG4441|consensus 93.5 2.9 6.4E-05 35.1 12.4 137 20-158 282-452 (571)
422 COG3204 Uncharacterized protei 92.8 3.5 7.5E-05 31.4 12.9 103 56-158 88-210 (316)
423 PF15390 DUF4613: Domain of un 92.6 5.4 0.00012 33.4 13.7 108 12-119 57-188 (671)
424 TIGR02604 Piru_Ver_Nterm putat 92.5 1.8 3.9E-05 34.1 9.5 92 12-106 72-202 (367)
425 KOG1916|consensus 92.5 0.81 1.8E-05 39.9 7.8 127 33-159 153-324 (1283)
426 KOG2395|consensus 92.4 0.51 1.1E-05 38.6 6.2 67 14-82 433-499 (644)
427 PRK13684 Ycf48-like protein; P 92.4 4.2 9.2E-05 31.6 16.5 140 12-156 173-329 (334)
428 PRK10115 protease 2; Provision 92.4 6.7 0.00014 33.8 15.5 102 56-157 129-254 (686)
429 TIGR03074 PQQ_membr_DH membran 92.3 7.1 0.00015 34.1 17.7 143 22-164 259-483 (764)
430 PF03088 Str_synth: Strictosid 91.9 1.9 4.2E-05 26.6 8.0 53 105-157 33-86 (89)
431 TIGR03075 PQQ_enz_alc_DH PQQ-d 91.9 6.6 0.00014 32.7 16.6 140 23-163 120-338 (527)
432 PF05694 SBP56: 56kDa selenium 91.7 6.2 0.00013 31.9 13.0 140 20-159 138-343 (461)
433 PF08728 CRT10: CRT10; InterP 91.5 8 0.00017 33.3 12.5 70 90-159 103-196 (717)
434 KOG3630|consensus 90.9 3 6.5E-05 37.5 9.6 132 16-147 105-262 (1405)
435 PF11715 Nup160: Nucleoporin N 90.8 0.84 1.8E-05 37.9 6.3 35 90-124 217-255 (547)
436 PF10168 Nup88: Nuclear pore c 90.6 9.1 0.0002 33.2 12.2 70 89-159 86-180 (717)
437 PF01436 NHL: NHL repeat; Int 90.6 1 2.2E-05 21.1 4.1 26 130-155 3-28 (28)
438 COG3823 Glutamine cyclotransfe 90.6 5.2 0.00011 29.1 11.5 115 30-147 108-247 (262)
439 KOG4460|consensus 90.6 6.7 0.00014 32.5 10.7 74 12-85 104-200 (741)
440 PF07995 GSDH: Glucose / Sorbo 90.4 7 0.00015 30.3 16.4 64 90-153 255-330 (331)
441 KOG1916|consensus 90.4 0.36 7.7E-06 41.9 3.7 69 14-83 186-265 (1283)
442 PF11715 Nup160: Nucleoporin N 90.1 1.2 2.7E-05 36.9 6.7 37 14-50 217-257 (547)
443 PF03088 Str_synth: Strictosid 89.8 3.2 7E-05 25.6 8.3 38 32-70 36-73 (89)
444 TIGR03074 PQQ_membr_DH membran 88.9 15 0.00033 32.1 14.1 130 23-163 194-349 (764)
445 PF07250 Glyoxal_oxid_N: Glyox 88.8 8 0.00017 28.7 13.0 126 35-162 48-201 (243)
446 KOG4499|consensus 88.6 5 0.00011 29.8 7.9 49 15-63 215-263 (310)
447 PF13449 Phytase-like: Esteras 88.4 10 0.00022 29.4 11.2 58 13-71 86-164 (326)
448 PF14761 HPS3_N: Hermansky-Pud 87.7 3.2 7E-05 30.1 6.5 50 100-149 29-80 (215)
449 PF12657 TFIIIC_delta: Transcr 87.3 7.2 0.00016 27.1 8.1 29 130-158 87-121 (173)
450 PHA02790 Kelch-like protein; P 86.9 16 0.00034 30.0 12.9 98 21-119 270-386 (480)
451 PF14727 PHTB1_N: PTHB1 N-term 86.8 15 0.00032 29.7 13.7 135 22-157 36-203 (418)
452 PF13449 Phytase-like: Esteras 86.3 14 0.00029 28.7 12.3 57 91-148 88-166 (326)
453 KOG1520|consensus 85.6 16 0.00035 28.9 10.9 51 107-157 197-248 (376)
454 KOG3616|consensus 84.6 3.1 6.7E-05 36.0 5.8 65 88-156 15-81 (1636)
455 PF08728 CRT10: CRT10; InterP 84.6 14 0.0003 31.9 9.7 93 65-157 114-245 (717)
456 PF01731 Arylesterase: Arylest 84.2 7.5 0.00016 23.8 6.2 49 109-159 36-85 (86)
457 PF14761 HPS3_N: Hermansky-Pud 84.0 14 0.00031 26.9 12.1 125 24-159 29-164 (215)
458 smart00564 PQQ beta-propeller 83.9 3.4 7.3E-05 19.7 4.0 23 25-47 8-30 (33)
459 COG5167 VID27 Protein involved 83.8 4.2 9E-05 33.6 6.0 61 22-83 572-632 (776)
460 PF07250 Glyoxal_oxid_N: Glyox 83.6 16 0.00034 27.2 9.3 108 17-126 72-206 (243)
461 TIGR02608 delta_60_rpt delta-6 82.1 6.3 0.00014 21.9 4.7 32 130-161 2-38 (55)
462 PF10214 Rrn6: RNA polymerase 82.0 25 0.00053 30.9 10.5 30 132-162 207-236 (765)
463 PF02333 Phytase: Phytase; In 81.5 25 0.00055 28.0 18.5 135 21-159 66-238 (381)
464 PRK13684 Ycf48-like protein; P 81.2 24 0.00051 27.5 14.4 96 55-153 174-283 (334)
465 KOG2280|consensus 80.9 37 0.0008 29.5 13.0 64 17-83 38-112 (829)
466 TIGR03118 PEPCTERM_chp_1 conse 80.2 25 0.00055 27.2 17.4 32 10-41 21-52 (336)
467 PF01011 PQQ: PQQ enzyme repea 80.0 5.9 0.00013 19.8 5.0 28 25-52 2-29 (38)
468 KOG2377|consensus 79.9 21 0.00046 29.2 8.6 72 91-162 26-100 (657)
469 KOG4460|consensus 79.4 36 0.00078 28.5 12.8 30 131-160 168-200 (741)
470 TIGR03547 muta_rot_YjhT mutatr 79.3 27 0.00059 27.0 11.3 40 33-73 168-209 (346)
471 TIGR03548 mutarot_permut cycli 79.1 27 0.00058 26.8 14.9 97 22-119 72-196 (323)
472 TIGR03548 mutarot_permut cycli 78.1 29 0.00062 26.6 11.2 63 22-84 123-195 (323)
473 TIGR02171 Fb_sc_TIGR02171 Fibr 76.8 16 0.00036 32.3 7.7 51 33-84 329-386 (912)
474 PF10214 Rrn6: RNA polymerase 76.8 52 0.0011 28.9 16.1 107 10-118 144-277 (765)
475 PF14779 BBS1: Ciliary BBSome 76.0 19 0.00041 27.0 6.9 56 100-155 196-255 (257)
476 PLN02153 epithiospecifier prot 75.7 35 0.00076 26.4 14.7 25 22-46 85-114 (341)
477 PF14269 Arylsulfotran_2: Aryl 75.3 35 0.00076 26.2 12.6 137 13-156 58-218 (299)
478 TIGR03547 muta_rot_YjhT mutatr 75.2 36 0.00078 26.3 13.0 54 21-74 62-128 (346)
479 TIGR02171 Fb_sc_TIGR02171 Fibr 75.1 13 0.00027 33.0 6.6 53 107-159 327-386 (912)
480 PLN00033 photosystem II stabil 75.1 42 0.00091 27.0 17.8 135 15-155 242-396 (398)
481 KOG2247|consensus 74.8 0.65 1.4E-05 37.7 -0.9 95 10-105 73-177 (615)
482 TIGR03032 conserved hypothetic 74.5 35 0.00075 26.6 8.1 68 98-167 212-299 (335)
483 KOG1897|consensus 74.0 68 0.0015 29.0 17.7 106 13-118 489-614 (1096)
484 PF13570 PQQ_3: PQQ-like domai 73.0 8 0.00017 19.5 3.3 21 22-42 20-40 (40)
485 TIGR03118 PEPCTERM_chp_1 conse 72.6 43 0.00093 26.0 8.1 15 143-157 103-117 (336)
486 PLN02193 nitrile-specifier pro 70.2 59 0.0013 26.6 16.0 138 22-160 228-412 (470)
487 PF05935 Arylsulfotrans: Aryls 70.1 61 0.0013 26.7 16.0 45 130-174 272-317 (477)
488 PRK13615 lipoprotein LpqB; Pro 69.9 67 0.0015 27.2 10.9 96 57-154 337-445 (557)
489 KOG1900|consensus 68.7 1E+02 0.0022 28.8 12.3 142 16-159 83-273 (1311)
490 PF01731 Arylesterase: Arylest 68.7 18 0.00039 22.2 4.6 28 14-41 56-84 (86)
491 PF05787 DUF839: Bacterial pro 67.7 24 0.00053 29.4 6.6 19 87-105 501-519 (524)
492 KOG3616|consensus 67.7 17 0.00038 31.7 5.7 59 54-114 15-80 (1636)
493 KOG1900|consensus 67.7 74 0.0016 29.6 9.6 76 6-84 173-273 (1311)
494 PF11635 Med16: Mediator compl 64.2 51 0.0011 28.9 8.1 65 89-153 261-345 (753)
495 COG1506 DAP2 Dipeptidyl aminop 64.0 93 0.002 26.6 10.2 134 5-151 53-190 (620)
496 smart00036 CNH Domain found in 62.8 67 0.0015 24.6 8.1 58 99-157 13-72 (302)
497 COG1520 FOG: WD40-like repeat 62.3 75 0.0016 24.9 14.2 99 26-126 71-180 (370)
498 PRK14131 N-acetylneuraminic ac 62.0 77 0.0017 25.0 12.3 48 111-159 314-369 (376)
499 PF14781 BBS2_N: Ciliary BBSom 61.1 48 0.001 22.3 8.8 74 90-163 1-86 (136)
500 PF05787 DUF839: Bacterial pro 61.0 38 0.00082 28.3 6.5 20 127-146 500-519 (524)
No 1
>KOG0272|consensus
Probab=99.98 E-value=2.9e-32 Score=204.22 Aligned_cols=167 Identities=26% Similarity=0.420 Sum_probs=154.7
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+|+.+..+..-|..++|+|+|++|+|++.|.+-++||+.+++.+.....|...+.+++|.+||.++++|+-|..-++||+
T Consensus 253 ~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDl 332 (459)
T KOG0272|consen 253 PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDL 332 (459)
T ss_pred chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeec
Confidence 56777888888999999999999999999999999999999988777888888899999999999999999999999999
Q ss_pred CC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc-CCCEEEEEcCCCcE
Q psy10953 83 NT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP-DGDKFVSVGEDKAV 152 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp-~g~~l~~~~~d~~v 152 (181)
++ +|...|..++|+|+|.+++||+.|++++|||++....+.+++ |.+-|..++|+| .|++|+++|.|+.+
T Consensus 333 Rtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~ 412 (459)
T KOG0272|consen 333 RTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTV 412 (459)
T ss_pred ccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcce
Confidence 86 488899999999999999999999999999999988888887 888899999999 78899999999999
Q ss_pred EEEeCCCCeeEEEcCCC
Q psy10953 153 HMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 153 ~i~~~~~~~~~~~~~~~ 169 (181)
++|...+++++..+.|.
T Consensus 413 kiWs~~~~~~~ksLaGH 429 (459)
T KOG0272|consen 413 KIWSTRTWSPLKSLAGH 429 (459)
T ss_pred eeecCCCcccchhhcCC
Confidence 99999999888877764
No 2
>KOG0271|consensus
Probab=99.97 E-value=1.8e-30 Score=193.02 Aligned_cols=165 Identities=26% Similarity=0.420 Sum_probs=146.5
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
-+.+..+...|.+++|+|+|++|++|+.|.++|+||+.+.........|..++.+++|+|||++|++|+.||.|.+||.+
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpk 187 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPK 187 (480)
T ss_pred ccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCC
Confidence 45677888889999999999999999999999999999999888888899999999999999999999999999999986
Q ss_pred C---------CCcccEEEEEEcC-----CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcC
Q psy10953 84 T---------GHSSWVLSTAFTR-----DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 84 ~---------~~~~~v~~~~~s~-----~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+ +|..+|++++|.| ..+.|++++.||+++|||+..+.++..+. |+..|+|+++--+| +|+++|.
T Consensus 188 tg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~ 266 (480)
T KOG0271|consen 188 TGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQ 266 (480)
T ss_pred CCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCC
Confidence 4 5888999999987 46799999999999999999988777664 99999999997554 8999999
Q ss_pred CCcEEEEeCCCCeeEEEcCCC
Q psy10953 149 DKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 149 d~~v~i~~~~~~~~~~~~~~~ 169 (181)
|++|++|+...|..++.+.|.
T Consensus 267 DrtIkvw~a~dG~~~r~lkGH 287 (480)
T KOG0271|consen 267 DRTIKVWRALDGKLCRELKGH 287 (480)
T ss_pred CceEEEEEccchhHHHhhccc
Confidence 999999999887666555553
No 3
>KOG0279|consensus
Probab=99.97 E-value=1.5e-29 Score=181.19 Aligned_cols=165 Identities=30% Similarity=0.455 Sum_probs=149.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
..++..+.--+.+++.++||++.++++.|+++++||+.+++..+.|..|...+.+++|++|.+++++|+.|+++.+|+..
T Consensus 56 ~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~ 135 (315)
T KOG0279|consen 56 VRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL 135 (315)
T ss_pred eeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec
Confidence 45677788889999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred C---------CCcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 84 T---------GHSSWVLSTAFTRD--GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 84 ~---------~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
. .+..+|.++.|+|+ .-.+++++.|+++++||+++.+....+. |.+.++.+++||||..+++|+.|+.
T Consensus 136 g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~ 215 (315)
T KOG0279|consen 136 GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGE 215 (315)
T ss_pred ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCce
Confidence 3 24789999999998 4589999999999999999988777665 8889999999999999999999999
Q ss_pred EEEEeCCCCeeEEEcCC
Q psy10953 152 VHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 152 v~i~~~~~~~~~~~~~~ 168 (181)
+.+||+..++.+.-.++
T Consensus 216 ~~LwdL~~~k~lysl~a 232 (315)
T KOG0279|consen 216 AMLWDLNEGKNLYSLEA 232 (315)
T ss_pred EEEEEccCCceeEeccC
Confidence 99999998877655444
No 4
>KOG0272|consensus
Probab=99.97 E-value=3.6e-30 Score=193.00 Aligned_cols=154 Identities=21% Similarity=0.434 Sum_probs=144.1
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++-....+...+++|+|.|||.++++|+.|..-++||+++++.+..+..|...+.++.|+|+|..|++|+.|++++|||+
T Consensus 295 ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDL 374 (459)
T KOG0272|consen 295 ELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDL 374 (459)
T ss_pred hhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeee
Confidence 34456678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC--------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 83 NT--------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
+. +|.+-|..+.|+| .|++|+|++.|.++++|..++..++.++. |.++|.++.++||++.+++++.|+++
T Consensus 375 R~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~ 454 (459)
T KOG0272|consen 375 RMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTI 454 (459)
T ss_pred cccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCcee
Confidence 74 5788899999999 68899999999999999999999998886 99999999999999999999999999
Q ss_pred EEEe
Q psy10953 153 HMYS 156 (181)
Q Consensus 153 ~i~~ 156 (181)
++|.
T Consensus 455 KLW~ 458 (459)
T KOG0272|consen 455 KLWR 458 (459)
T ss_pred eecc
Confidence 9996
No 5
>KOG0263|consensus
Probab=99.96 E-value=3.4e-29 Score=199.38 Aligned_cols=156 Identities=21% Similarity=0.471 Sum_probs=144.4
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..-..+..+||++.|+|.|-++||++.|++.++|.....+.++++..|-..+-|+.|+|+..++++|+.|.+|++||+.
T Consensus 486 ~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~ 565 (707)
T KOG0263|consen 486 LVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS 565 (707)
T ss_pred EEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcC
Confidence 34445788889999999999999999999999999999999999999888778899999999999999999999999986
Q ss_pred C--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 84 T--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
+ ||+.+|.+++|||+|++|++|+.|+.|++||+..++.+.++. |.+.|.++.||.+|..||+++.|+.|++
T Consensus 566 ~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~l 645 (707)
T KOG0263|consen 566 TGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRL 645 (707)
T ss_pred CCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEE
Confidence 4 689999999999999999999999999999999998887774 8889999999999999999999999999
Q ss_pred EeCCC
Q psy10953 155 YSYKP 159 (181)
Q Consensus 155 ~~~~~ 159 (181)
||+..
T Consensus 646 WD~~~ 650 (707)
T KOG0263|consen 646 WDLTK 650 (707)
T ss_pred EEchh
Confidence 99853
No 6
>KOG0263|consensus
Probab=99.96 E-value=7.8e-29 Score=197.33 Aligned_cols=161 Identities=20% Similarity=0.391 Sum_probs=149.0
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC-
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN- 83 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~- 83 (181)
..+..+...|+.++|+|+.++|++++.|+++|+|.+.+...+..+..|..++..+.|+|.|.+|++++.|++.++|...
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~ 524 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDH 524 (707)
T ss_pred EEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeeccc
Confidence 3467788889999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred -------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 84 -------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 84 -------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
-+|.+.|.++.|+|+..++++|+.|+++++||..++..+..+. |..+|.+++|||+|++|++|+.|+.|.+|
T Consensus 525 ~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iW 604 (707)
T KOG0263|consen 525 NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIW 604 (707)
T ss_pred CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEE
Confidence 3678889999999999999999999999999999999888886 89999999999999999999999999999
Q ss_pred eCCCCeeEEE
Q psy10953 156 SYKPEEEVEV 165 (181)
Q Consensus 156 ~~~~~~~~~~ 165 (181)
|+..+..+..
T Consensus 605 Dl~~~~~v~~ 614 (707)
T KOG0263|consen 605 DLANGSLVKQ 614 (707)
T ss_pred EcCCCcchhh
Confidence 9988765543
No 7
>KOG0315|consensus
Probab=99.96 E-value=1.7e-27 Score=168.58 Aligned_cols=166 Identities=19% Similarity=0.388 Sum_probs=139.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++..+..+.+.|..+.|..+|+++++|+.||++++||++.-...+.++.. ..+.++..+|+...|+++..+|.|++||+
T Consensus 75 Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~-spVn~vvlhpnQteLis~dqsg~irvWDl 153 (311)
T KOG0315|consen 75 PVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN-SPVNTVVLHPNQTELISGDQSGNIRVWDL 153 (311)
T ss_pred ceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC-CCcceEEecCCcceEEeecCCCcEEEEEc
Confidence 56777788888999999999999999999999999999986665666544 44667888888888888888888888886
Q ss_pred CC---------------------------------------------------------CCcccEEEEEEcCCCCEEEEE
Q psy10953 83 NT---------------------------------------------------------GHSSWVLSTAFTRDGKFFISA 105 (181)
Q Consensus 83 ~~---------------------------------------------------------~~~~~v~~~~~s~~~~~l~~~ 105 (181)
.. .|.+.+..+.+||++++|+++
T Consensus 154 ~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ 233 (311)
T KOG0315|consen 154 GENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATC 233 (311)
T ss_pred cCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEee
Confidence 41 144567888999999999999
Q ss_pred eCCCcEEEEecCCC-ceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 106 SADHTVRVWNFARR-ENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 106 ~~d~~i~v~d~~~~-~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
+.|++++||+..+. +.-..+. |...+|.++||.||++|++++.|+.+++|++..+++++...|.
T Consensus 234 ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh 299 (311)
T KOG0315|consen 234 SSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGH 299 (311)
T ss_pred cCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCc
Confidence 99999999999876 2222333 6678999999999999999999999999999999988877764
No 8
>KOG0286|consensus
Probab=99.96 E-value=3.4e-27 Score=170.28 Aligned_cols=165 Identities=24% Similarity=0.483 Sum_probs=148.3
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
-..+..+..+++++.|++|.++++++++||.+.+||.-+....+.+.....+++.++|+|.|+.++.|+-|+...+|++.
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls 127 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLS 127 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecc
Confidence 34567788899999999999999999999999999999888888888888889999999999999888888888888753
Q ss_pred C-------------------------------------------------------CCcccEEEEEEcC-CCCEEEEEeC
Q psy10953 84 T-------------------------------------------------------GHSSWVLSTAFTR-DGKFFISASA 107 (181)
Q Consensus 84 ~-------------------------------------------------------~~~~~v~~~~~s~-~~~~l~~~~~ 107 (181)
+ +|.+.|.++.++| +++.+++|+.
T Consensus 128 ~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~c 207 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGC 207 (343)
T ss_pred cccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccc
Confidence 1 3566788999999 8999999999
Q ss_pred CCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 108 DHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 108 d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
|+..++||++.+....+|. |...|++++|.|+|..|++|+.|+..++||++.++++.+..+
T Consensus 208 D~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~ 269 (343)
T KOG0286|consen 208 DKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSH 269 (343)
T ss_pred ccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeecc
Confidence 9999999999999888886 889999999999999999999999999999999999887764
No 9
>KOG0279|consensus
Probab=99.96 E-value=1.8e-27 Score=170.66 Aligned_cols=161 Identities=19% Similarity=0.383 Sum_probs=140.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCC--CCEEEEeeCCCcEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTD--GHWIASGALDGIINI 79 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d--~~~l~~~~~d~~v~i 79 (181)
..+++..+..+|.+++|+||.+.+++|+.|.+|++|++.++......... ..++.+++|+|. .-.|++++.|++|++
T Consensus 97 ~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKv 176 (315)
T KOG0279|consen 97 STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKV 176 (315)
T ss_pred EEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEE
Confidence 46778889999999999999999999999999999999876655554443 677889999998 678999999999999
Q ss_pred EeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 80 FDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 80 ~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
||+++ +|..+++.+++||||.++++|+.||.+.+||++.++.+..+.+...|.+++|+|+.-.|+ .+.+..
T Consensus 177 Wnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~-~at~~s 255 (315)
T KOG0279|consen 177 WNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLC-AATATS 255 (315)
T ss_pred EccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEe-eccCCc
Confidence 99974 678899999999999999999999999999999999998889999999999999965555 445667
Q ss_pred EEEEeCCCCeeEE
Q psy10953 152 VHMYSYKPEEEVE 164 (181)
Q Consensus 152 v~i~~~~~~~~~~ 164 (181)
|+||++.++..++
T Consensus 256 IkIwdl~~~~~v~ 268 (315)
T KOG0279|consen 256 IKIWDLESKAVVE 268 (315)
T ss_pred eEEEeccchhhhh
Confidence 9999998875554
No 10
>KOG0286|consensus
Probab=99.95 E-value=2.3e-26 Score=165.98 Aligned_cols=162 Identities=23% Similarity=0.345 Sum_probs=147.2
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEEeCCC-
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d~~~- 84 (181)
+..+..+++++.|-+ ..+|+|++.|.++.+||+++++..+.|..|...+.+++++| +++++++|+.|+..++||++.
T Consensus 141 l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~ 219 (343)
T KOG0286|consen 141 LAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG 219 (343)
T ss_pred ecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc
Confidence 566788899999977 55678999999999999999999999999988899999999 999999999999999999985
Q ss_pred -------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC---CcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 85 -------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA---DQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 85 -------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
+|.+.|+++.|.|+|.-+++|+.|+++++||++..+.+..+.+. .+|++++||..|++|++|..|..+.+
T Consensus 220 ~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~v 299 (343)
T KOG0286|consen 220 QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNV 299 (343)
T ss_pred ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeE
Confidence 57888999999999999999999999999999998888888654 46899999999999999999999999
Q ss_pred EeCCCCeeEEEcCCC
Q psy10953 155 YSYKPEEEVEVNGGG 169 (181)
Q Consensus 155 ~~~~~~~~~~~~~~~ 169 (181)
||.-.++++.++.|.
T Consensus 300 WDtlk~e~vg~L~GH 314 (343)
T KOG0286|consen 300 WDTLKGERVGVLAGH 314 (343)
T ss_pred eeccccceEEEeecc
Confidence 999888888877763
No 11
>KOG0266|consensus
Probab=99.95 E-value=4.3e-26 Score=181.54 Aligned_cols=164 Identities=28% Similarity=0.557 Sum_probs=142.9
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeC-CCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGV-ETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~-~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
..+..+...+++++|+|+|+++++++.|++|++||+ ..++....+..|...+.+++|+|+|+.+++|+.|++|++||++
T Consensus 197 ~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~ 276 (456)
T KOG0266|consen 197 RELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR 276 (456)
T ss_pred ccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEecc
Confidence 344567778999999999999999999999999999 5668888888898899999999999999999999999999998
Q ss_pred C--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce--eeeee-cCC--cEEEEEEccCCCEEEEEcCCC
Q psy10953 84 T--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN--MHTFK-HAD--QVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~-~~~--~v~~~~~sp~g~~l~~~~~d~ 150 (181)
+ +|...|..++|++++++|++++.|+.|++||+.++.. ...+. +.. .++++.|+|++++++++..|+
T Consensus 277 ~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~ 356 (456)
T KOG0266|consen 277 TGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDR 356 (456)
T ss_pred CCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCC
Confidence 5 4778899999999999999999999999999999883 34443 222 589999999999999999999
Q ss_pred cEEEEeCCCCeeEEEcCC
Q psy10953 151 AVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~~~ 168 (181)
.+++|++..+..+....+
T Consensus 357 ~~~~w~l~~~~~~~~~~~ 374 (456)
T KOG0266|consen 357 TLKLWDLRSGKSVGTYTG 374 (456)
T ss_pred eEEEEEccCCcceeeecc
Confidence 999999987765544444
No 12
>KOG0271|consensus
Probab=99.95 E-value=3.2e-26 Score=170.47 Aligned_cols=159 Identities=26% Similarity=0.451 Sum_probs=135.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEE-EEEecCCceEEEEEECC-----CCCEEEEeeCCCc
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLE-QIFDTRGKFTLSIAYST-----DGHWIASGALDGI 76 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~s~-----d~~~l~~~~~d~~ 76 (181)
++..+..+..=|.+++|||||+.||+|+.||+|++||-++|+.+ ..+..|...+.+++|.| .+++|++++.||.
T Consensus 149 p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~ 228 (480)
T KOG0271|consen 149 PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGS 228 (480)
T ss_pred cceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCC
Confidence 34445556667899999999999999999999999999888766 56777888888888865 5677888888888
Q ss_pred EEEEeCCC------------------------------------------------------------------------
Q psy10953 77 INIFDANT------------------------------------------------------------------------ 84 (181)
Q Consensus 77 v~i~d~~~------------------------------------------------------------------------ 84 (181)
++|||+..
T Consensus 229 vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~ 308 (480)
T KOG0271|consen 229 VRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFD 308 (480)
T ss_pred EEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccc
Confidence 88887420
Q ss_pred --------------------------------------------------------CCcccEEEEEEcCCCCEEEEEeCC
Q psy10953 85 --------------------------------------------------------GHSSWVLSTAFTRDGKFFISASAD 108 (181)
Q Consensus 85 --------------------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d 108 (181)
+|..-|+.+.||||++++++++.|
T Consensus 309 ~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFD 388 (480)
T KOG0271|consen 309 HTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFD 388 (480)
T ss_pred cccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecc
Confidence 122347789999999999999999
Q ss_pred CcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 109 HTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 109 ~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
..|++||.++++-+.++. |-..|+-+++|.|.+.+++||.|.++++|++++..
T Consensus 389 kSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkK 442 (480)
T KOG0271|consen 389 KSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKK 442 (480)
T ss_pred cceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeee
Confidence 999999999999999997 88999999999999999999999999999997643
No 13
>KOG0266|consensus
Probab=99.94 E-value=2.2e-25 Score=177.51 Aligned_cols=152 Identities=30% Similarity=0.526 Sum_probs=139.0
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC-----
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN----- 83 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~----- 83 (181)
...+.++.|+|+|+.+++++.|+.+++|+..+.+ ....+..|...+.+++|+||++++++++.|+++++||+.
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~ 238 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRN 238 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeE
Confidence 4557889999999999999999999999997777 666666677788899999999999999999999999993
Q ss_pred ----CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 84 ----TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 84 ----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
.+|...|++++|+|+|+++++|+.|++|++||++++++...+. |.+.|.+++|++++++|++++.|+.|++||..
T Consensus 239 ~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~ 318 (456)
T KOG0266|consen 239 LKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLE 318 (456)
T ss_pred EEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECC
Confidence 3688999999999999999999999999999999998888886 88899999999999999999999999999999
Q ss_pred CCee
Q psy10953 159 PEEE 162 (181)
Q Consensus 159 ~~~~ 162 (181)
++..
T Consensus 319 ~~~~ 322 (456)
T KOG0266|consen 319 TGSK 322 (456)
T ss_pred CCce
Confidence 8884
No 14
>KOG0284|consensus
Probab=99.94 E-value=5.1e-27 Score=175.64 Aligned_cols=160 Identities=24% Similarity=0.424 Sum_probs=144.6
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------ 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------ 85 (181)
..+++++|||+...++++++|++|++||....+....+..|+..+.++.|+|....+++++.|+.|++||.+++
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tl 260 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATL 260 (464)
T ss_pred hhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhh
Confidence 66899999999999999999999999999988888888999999999999999999999999999999999864
Q ss_pred --CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccC-CCEEEEEcCCCcEEEEeCCCCe
Q psy10953 86 --HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPD-GDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
|+..|..+.|+|++++|++++.|..+++||+++-+.+..++ |.+.++++.++|- ...|.+|+.|+.|..|.+...+
T Consensus 261 h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~ 340 (464)
T KOG0284|consen 261 HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEE 340 (464)
T ss_pred hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccc
Confidence 77889999999999999999999999999999777777776 8899999999995 5577888999999999998777
Q ss_pred eEEEcCCCCc
Q psy10953 162 EVEVNGGGGE 171 (181)
Q Consensus 162 ~~~~~~~~~~ 171 (181)
++....++++
T Consensus 341 p~~~i~~AHd 350 (464)
T KOG0284|consen 341 PLGEIPPAHD 350 (464)
T ss_pred cccCCCcccc
Confidence 7766666544
No 15
>KOG0291|consensus
Probab=99.94 E-value=1e-24 Score=173.77 Aligned_cols=164 Identities=23% Similarity=0.428 Sum_probs=146.2
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+.+.|.+-..+.+++.||||+++|+|+.|++|++||...+-+...|..|...+..+.|+..|+.+++.+-||+|+.||+.
T Consensus 343 VlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 343 VLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred eeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 45678888889999999999999999999999999999999999998888888899999999999999999999999964
Q ss_pred ----------------------------------------------------CCCcccEEEEEEcCCCCEEEEEeCCCcE
Q psy10953 84 ----------------------------------------------------TGHSSWVLSTAFTRDGKFFISASADHTV 111 (181)
Q Consensus 84 ----------------------------------------------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i 111 (181)
.||.++|.++.|+|.+..|++++-|.+|
T Consensus 423 RYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTV 502 (893)
T KOG0291|consen 423 RYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTV 502 (893)
T ss_pred ccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceE
Confidence 1578889999999999999999999999
Q ss_pred EEEecCCC-ceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 112 RVWNFARR-ENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 112 ~v~d~~~~-~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
++||+... ....++.+...+..++|+|+|+.++++..||.|.+||.+.+.++...+
T Consensus 503 RiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Id 559 (893)
T KOG0291|consen 503 RIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSID 559 (893)
T ss_pred EEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeecccc
Confidence 99998764 345566777889999999999999999999999999998776664333
No 16
>KOG0273|consensus
Probab=99.93 E-value=1.1e-24 Score=165.71 Aligned_cols=160 Identities=27% Similarity=0.501 Sum_probs=136.0
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
...++.+++|+.+|..||+|+.||.+++|+.. |.++..+..|..++.++.|+.+|.+|++++-|+++.+||..+
T Consensus 234 ~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 234 SNKDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQ 312 (524)
T ss_pred ccCCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEE
Confidence 34678999999999999999999999999876 555556666777788999999999999999999999999631
Q ss_pred --------------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecC---
Q psy10953 85 --------------------------------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFA--- 117 (181)
Q Consensus 85 --------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~--- 117 (181)
+|.+.|.++.|+|.|.+|++++.|+++++|+..
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~ 392 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN 392 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc
Confidence 367789999999999999999999999999731
Q ss_pred ------------------------------------------------CCceeeee-ecCCcEEEEEEccCCCEEEEEcC
Q psy10953 118 ------------------------------------------------RRENMHTF-KHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 118 ------------------------------------------------~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
.+.+++.+ +|..+|++++|||+|+++++|+.
T Consensus 393 ~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~ 472 (524)
T KOG0273|consen 393 SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSL 472 (524)
T ss_pred chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCC
Confidence 23455555 58889999999999999999999
Q ss_pred CCcEEEEeCCCCeeEEEcCCCC
Q psy10953 149 DKAVHMYSYKPEEEVEVNGGGG 170 (181)
Q Consensus 149 d~~v~i~~~~~~~~~~~~~~~~ 170 (181)
|+.|++|+.+++..+.-..++.
T Consensus 473 dg~V~iws~~~~~l~~s~~~~~ 494 (524)
T KOG0273|consen 473 DGCVHIWSTKTGKLVKSYQGTG 494 (524)
T ss_pred CCeeEeccccchheeEeecCCC
Confidence 9999999999988877666543
No 17
>KOG0285|consensus
Probab=99.93 E-value=3e-24 Score=158.95 Aligned_cols=157 Identities=20% Similarity=0.356 Sum_probs=143.9
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
+..+..=|.++++.|.++++++|+.|+++++||+.++++...+..|-..+..+++|+...++++++.|+.|+-||++.
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk 226 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK 226 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh
Confidence 344666689999999999999999999999999999999998888877888999999999999999999999999963
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
||.+.|.++++.|.-+.|++++.|..+++||+++...+..+. |...|..+.+.|..-.+++||.|.+|++||+
T Consensus 227 vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl 306 (460)
T KOG0285|consen 227 VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDL 306 (460)
T ss_pred hHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeee
Confidence 688899999999999999999999999999999999888886 9999999999998889999999999999999
Q ss_pred CCCeeE
Q psy10953 158 KPEEEV 163 (181)
Q Consensus 158 ~~~~~~ 163 (181)
..+...
T Consensus 307 ~agkt~ 312 (460)
T KOG0285|consen 307 RAGKTM 312 (460)
T ss_pred ccCcee
Confidence 776543
No 18
>KOG0319|consensus
Probab=99.93 E-value=3.2e-25 Score=175.96 Aligned_cols=157 Identities=30% Similarity=0.505 Sum_probs=146.3
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC---
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT--- 84 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--- 84 (181)
..+.+++.+++++|+.+++|||++|++.++|+++..++...+..|...+.++.|+|..+.+++++.|++|++|.+.+
T Consensus 460 ~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSC 539 (775)
T KOG0319|consen 460 RAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSC 539 (775)
T ss_pred HhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecccee
Confidence 44778899999999999999999999999999999999999999998899999999999999999999999999863
Q ss_pred -----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 85 -----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 85 -----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
||...|..+.|-.+|+.|++++.||-+++|++++..+..++. |.++||.++.+|...++++|+.|+.|.+|.=.
T Consensus 540 lkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 540 LKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDV 619 (775)
T ss_pred eeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecC
Confidence 688999999999999999999999999999999999999986 99999999999999999999999999999877
Q ss_pred CCeeEE
Q psy10953 159 PEEEVE 164 (181)
Q Consensus 159 ~~~~~~ 164 (181)
+.++.+
T Consensus 620 Te~~~~ 625 (775)
T KOG0319|consen 620 TEEEQN 625 (775)
T ss_pred cHHHHH
Confidence 655543
No 19
>KOG0275|consensus
Probab=99.93 E-value=8.2e-26 Score=165.80 Aligned_cols=152 Identities=32% Similarity=0.500 Sum_probs=135.5
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe--------cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD--------TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+-+..|||||++|++|+.||.|.+|+..+|++..-+. .....+.|++||.|..++++|+.||.+++|.+.+
T Consensus 215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~t 294 (508)
T KOG0275|consen 215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIET 294 (508)
T ss_pred chhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEec
Confidence 34678899999999999999999999999998754322 2356678999999999999999999999999876
Q ss_pred C---------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 85 G---------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 85 ~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
+ |...|+++.||.|+..+++++.|.++++--+++++.+..+. |...|+.+.|++||..+++++.|++|++
T Consensus 295 G~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkv 374 (508)
T KOG0275|consen 295 GQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKV 374 (508)
T ss_pred chHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEE
Confidence 4 77889999999999999999999999999999999999987 8888999999999999999999999999
Q ss_pred EeCCCCeeEE
Q psy10953 155 YSYKPEEEVE 164 (181)
Q Consensus 155 ~~~~~~~~~~ 164 (181)
|+.++.+-+.
T Consensus 375 W~~KtteC~~ 384 (508)
T KOG0275|consen 375 WHGKTTECLS 384 (508)
T ss_pred ecCcchhhhh
Confidence 9998765443
No 20
>KOG0645|consensus
Probab=99.93 E-value=1.4e-23 Score=150.27 Aligned_cols=158 Identities=20% Similarity=0.426 Sum_probs=135.3
Q ss_pred cceeeeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCC---cEEEEEe-cCCceEEEEEECCCCCEEEEeeCCCc
Q psy10953 2 KQISKINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETG---KLEQIFD-TRGKFTLSIAYSTDGHWIASGALDGI 76 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~---~~~~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~ 76 (181)
..+++++.++..+|.++|+|. |..||+++.|+.|++|++..+ .+...+. .|...+++++|+|.|++|++++.|.+
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 356777888888999999998 999999999999999998842 3333332 36677889999999999999999999
Q ss_pred EEEEeCC----------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee---eee-ecCCcEEEEEEccCCCE
Q psy10953 77 INIFDAN----------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM---HTF-KHADQVWCVCVAPDGDK 142 (181)
Q Consensus 77 v~i~d~~----------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~-~~~~~v~~~~~sp~g~~ 142 (181)
+.+|.-. .||.+.|-+++|+++|++||+++.|+.|-||.......+ ..+ .|...|-.+.|+|....
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl 164 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL 164 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce
Confidence 9999754 378889999999999999999999999999998855433 333 38888999999999999
Q ss_pred EEEEcCCCcEEEEeCCC
Q psy10953 143 FVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~ 159 (181)
|+++|.|++|++|+-..
T Consensus 165 L~S~SYDnTIk~~~~~~ 181 (312)
T KOG0645|consen 165 LFSCSYDNTIKVYRDED 181 (312)
T ss_pred eEEeccCCeEEEEeecC
Confidence 99999999999999873
No 21
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=2.4e-23 Score=166.32 Aligned_cols=154 Identities=17% Similarity=0.281 Sum_probs=128.5
Q ss_pred eccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc-------EEEEEecCCceEEEEEECCCC-CEEEEeeCCCcE
Q psy10953 7 INVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGK-------LEQIFDTRGKFTLSIAYSTDG-HWIASGALDGII 77 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v 77 (181)
+..+...|.+++|+| ++++|++|+.|++|++||+.++. .+..+..|...+.+++|+|++ .+|++++.|+.|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 455677799999999 88999999999999999997653 345566677778899999986 689999999999
Q ss_pred EEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCc-EEEEEEccCCCEEEEEc
Q psy10953 78 NIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQ-VWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 78 ~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~-v~~~~~sp~g~~l~~~~ 147 (181)
++||+.+ +|...|.+++|+|+|++|++++.|+.|++||+++++.+..+. |.+. ...+.|.+++..+++++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G 230 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLG 230 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEe
Confidence 9999975 366789999999999999999999999999999988777665 5443 44677889888887654
Q ss_pred ----CCCcEEEEeCCCC
Q psy10953 148 ----EDKAVHMYSYKPE 160 (181)
Q Consensus 148 ----~d~~v~i~~~~~~ 160 (181)
.|+.|++||+...
T Consensus 231 ~s~s~Dr~VklWDlr~~ 247 (493)
T PTZ00421 231 CSKSQQRQIMLWDTRKM 247 (493)
T ss_pred cCCCCCCeEEEEeCCCC
Confidence 4789999999754
No 22
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=5.9e-23 Score=165.44 Aligned_cols=156 Identities=17% Similarity=0.322 Sum_probs=127.5
Q ss_pred eeeeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCc--------EEEEEecCCceEEEEEECCCCCE-EEEeeC
Q psy10953 4 ISKINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGK--------LEQIFDTRGKFTLSIAYSTDGHW-IASGAL 73 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~s~d~~~-l~~~~~ 73 (181)
+..+..+...|.+++|+|+ +++|++|+.|++|++||+.++. ....+..|...+.+++|+|++.. |++++.
T Consensus 67 v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~ 146 (568)
T PTZ00420 67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGF 146 (568)
T ss_pred EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeC
Confidence 4556778888999999997 7899999999999999997642 12345567777889999999876 468899
Q ss_pred CCcEEEEeCCCC-------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCc-----EEEEEEccCC
Q psy10953 74 DGIINIFDANTG-------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQ-----VWCVCVAPDG 140 (181)
Q Consensus 74 d~~v~i~d~~~~-------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~-----v~~~~~sp~g 140 (181)
|+.+++||++++ +...|.+++|+|+|++|++++.|+.|++||+++++.+.++. |.+. ++...|++++
T Consensus 147 DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~ 226 (568)
T PTZ00420 147 DSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDD 226 (568)
T ss_pred CCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCC
Confidence 999999999764 34568899999999999999999999999999998877765 5543 3444567899
Q ss_pred CEEEEEcCCC----cEEEEeCCC
Q psy10953 141 DKFVSVGEDK----AVHMYSYKP 159 (181)
Q Consensus 141 ~~l~~~~~d~----~v~i~~~~~ 159 (181)
+++++++.++ .|++||+..
T Consensus 227 ~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 227 NYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred CEEEEEEcCCCCccEEEEEECCC
Confidence 9999988664 799999984
No 23
>KOG0295|consensus
Probab=99.92 E-value=1.3e-23 Score=155.52 Aligned_cols=165 Identities=22% Similarity=0.334 Sum_probs=146.0
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+|..+..++..++++.|-|.|.++++++.|.+|+.|++.++-.+..+..+..++..+....||..+++++.|.++++|-.
T Consensus 185 c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~ 264 (406)
T KOG0295|consen 185 CIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVV 264 (406)
T ss_pred HHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEe
Confidence 45566777888999999999999999999999999999999999999999999989999999999999999999999987
Q ss_pred CCC--------CcccEEEEEEcCC---------------CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc
Q psy10953 83 NTG--------HSSWVLSTAFTRD---------------GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP 138 (181)
Q Consensus 83 ~~~--------~~~~v~~~~~s~~---------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp 138 (181)
.++ |.-.|.+++|-|. ++++++++.|++|++||+.++.++.++. |...|.+++|+|
T Consensus 265 ~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p 344 (406)
T KOG0295|consen 265 ATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP 344 (406)
T ss_pred ccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcC
Confidence 653 5566777776653 3689999999999999999999888876 888999999999
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 139 DGDKFVSVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 139 ~g~~l~~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
.|++|++++.|+++++|+++..+-.....
T Consensus 345 ~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ 373 (406)
T KOG0295|consen 345 GGKYILSCADDKTLRVWDLKNLQCMKTLE 373 (406)
T ss_pred CCeEEEEEecCCcEEEEEeccceeeeccC
Confidence 99999999999999999998876655444
No 24
>KOG0645|consensus
Probab=99.92 E-value=2.6e-23 Score=148.90 Aligned_cols=148 Identities=21% Similarity=0.405 Sum_probs=130.1
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE--EEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL--EQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN---- 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~---- 83 (181)
+...++.++|+|.|++|++|++|.++.+|.-..+.+ ...+..|...+.+++|+++|++||+.+.|+.|-+|.+.
T Consensus 60 hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE 139 (312)
T KOG0645|consen 60 HKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE 139 (312)
T ss_pred chheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc
Confidence 556689999999999999999999999998776654 46677787889999999999999999999999999875
Q ss_pred -------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC---Cceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 84 -------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR---RENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 84 -------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
.+|...|-.+.|+|...+|++++.|.+|++|.-.. ..++.++. |...||+++|+|.|.++++++.|+++
T Consensus 140 fec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv 219 (312)
T KOG0645|consen 140 FECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTV 219 (312)
T ss_pred EEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcce
Confidence 35777788899999999999999999999998762 24566665 77789999999999999999999999
Q ss_pred EEEeC
Q psy10953 153 HMYSY 157 (181)
Q Consensus 153 ~i~~~ 157 (181)
+||..
T Consensus 220 ~Iw~~ 224 (312)
T KOG0645|consen 220 SIWRL 224 (312)
T ss_pred Eeeee
Confidence 99994
No 25
>KOG0265|consensus
Probab=99.92 E-value=2.8e-23 Score=150.53 Aligned_cols=170 Identities=23% Similarity=0.363 Sum_probs=145.2
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
.+|..+..++..++.+.|+|+|..+++|+.|..|.+|++. .-+....+..|...++.+.|.+|+..+++++.|++++.|
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w 117 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW 117 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence 4667778899999999999999999999999999999964 334445566788889999999999999999999999999
Q ss_pred eCCCC--------CcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 81 DANTG--------HSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 81 d~~~~--------~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
|.+++ |...|+.+.-+..|. ++.+++.|+++++||++....+.++....++.++.|..++..+.+|+.|+.
T Consensus 118 D~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ 197 (338)
T KOG0265|consen 118 DAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDND 197 (338)
T ss_pred ecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCc
Confidence 99864 556677776444554 666788899999999999999988887788999999999999999999999
Q ss_pred EEEEeCCCCeeEEEcCCCCc
Q psy10953 152 VHMYSYKPEEEVEVNGGGGE 171 (181)
Q Consensus 152 v~i~~~~~~~~~~~~~~~~~ 171 (181)
|++||+....-..+.+|+.+
T Consensus 198 ikvWd~r~~d~~~~lsGh~D 217 (338)
T KOG0265|consen 198 IKVWDLRKNDGLYTLSGHAD 217 (338)
T ss_pred eeeeccccCcceEEeecccC
Confidence 99999987777777777543
No 26
>KOG0284|consensus
Probab=99.92 E-value=6.9e-25 Score=164.32 Aligned_cols=161 Identities=19% Similarity=0.335 Sum_probs=139.4
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
+|.+...|+.+.|+++|.++++|+.+|.|+.|+..-........++...+.+++|||....|++++.||+++|||...
T Consensus 134 lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k 213 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK 213 (464)
T ss_pred hhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc
Confidence 455666789999999999999999999999998775555444445557889999999999999999999999999753
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+|.-.|.+++|+|.--++++++.|..|++||.+++.++.++. |...|..+.|+|++++|+++|.|..++++|+
T Consensus 214 ee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~Di 293 (464)
T KOG0284|consen 214 EERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDI 293 (464)
T ss_pred hhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEeh
Confidence 555678999999999999999999999999999999999886 7788999999999999999999999999999
Q ss_pred CCCeeEEEcC
Q psy10953 158 KPEEEVEVNG 167 (181)
Q Consensus 158 ~~~~~~~~~~ 167 (181)
++..++....
T Consensus 294 R~mkEl~~~r 303 (464)
T KOG0284|consen 294 RTMKELFTYR 303 (464)
T ss_pred hHhHHHHHhh
Confidence 8655444333
No 27
>KOG0306|consensus
Probab=99.92 E-value=2.2e-23 Score=166.15 Aligned_cols=151 Identities=25% Similarity=0.434 Sum_probs=135.9
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC------
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT------ 84 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~------ 84 (181)
+.++.++++||||++|+++--|.++++|-+++-++...+=.|.-++.|+.+|||++.+++|+.|+.|++|-+.-
T Consensus 508 ~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS 587 (888)
T KOG0306|consen 508 EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKS 587 (888)
T ss_pred cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhh
Confidence 34589999999999999999999999999998888766666777888999999999999999999999998863
Q ss_pred --CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 85 --GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 85 --~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+|...|.++.|.|....+++++.|+.++-||-.....+..+. |...||+++.+|+|.+++++|.|..|++|....+.
T Consensus 588 ~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 588 FFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDEI 667 (888)
T ss_pred hhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCcc
Confidence 367789999999999999999999999999988887777775 88999999999999999999999999999985443
No 28
>KOG0278|consensus
Probab=99.92 E-value=4.3e-23 Score=146.61 Aligned_cols=168 Identities=22% Similarity=0.376 Sum_probs=138.3
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG- 85 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~- 85 (181)
+..++..+..+-|....+.++++.+|++||+||.++++..+.+..... +.++.+++||++| +-+..+.|..||+.+-
T Consensus 139 ~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~-VtSlEvs~dG~il-Tia~gssV~Fwdaksf~ 216 (334)
T KOG0278|consen 139 ISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSP-VTSLEVSQDGRIL-TIAYGSSVKFWDAKSFG 216 (334)
T ss_pred hcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCC-CcceeeccCCCEE-EEecCceeEEecccccc
Confidence 445667788899998888898989999999999999999998876555 5689999999955 4555678999998753
Q ss_pred ------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee--ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 ------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF--KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 ------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
....|.+..++|+...+++|+.|..++.||+.++..+..+ .|.++|.|+.|+|+|...++||+||+|++|..
T Consensus 217 ~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 217 LLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT 296 (334)
T ss_pred ceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence 2345788899999999999999999999999999888775 48899999999999999999999999999999
Q ss_pred CCCeeEEEcCCCCcchhhh
Q psy10953 158 KPEEEVEVNGGGGEEEEEE 176 (181)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~ 176 (181)
.+++.-.+..-.+.+++-|
T Consensus 297 ~~~~~~~~~~~~~~ed~~e 315 (334)
T KOG0278|consen 297 TPGKTYGLWKCVKPEDDGE 315 (334)
T ss_pred cCCCchhhccccChhhhcc
Confidence 8776554433334444433
No 29
>KOG0296|consensus
Probab=99.91 E-value=1.1e-22 Score=150.68 Aligned_cols=165 Identities=17% Similarity=0.367 Sum_probs=148.1
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..++.+...+++++.+|+.++++||+.|....+|++.++.....+..|+..+.++.|+.||.+|++|+-+|.|.+|+.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~ 135 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV 135 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence 46778889999999999999999999999999999999999988888889998999999999999999999999999999
Q ss_pred CCCCcccE--------EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 83 NTGHSSWV--------LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 83 ~~~~~~~v--------~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
.+++..+. .=+.|+|.+..|+.|+.||.+-+|.+..+.....+. |..++++-.|.|+|++++++..|+.|+
T Consensus 136 stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~ 215 (399)
T KOG0296|consen 136 STGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTII 215 (399)
T ss_pred ccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEE
Confidence 88765443 347899999999999999999999998865455554 888899999999999999999999999
Q ss_pred EEeCCCCeeEEEcC
Q psy10953 154 MYSYKPEEEVEVNG 167 (181)
Q Consensus 154 i~~~~~~~~~~~~~ 167 (181)
+|+.++++++....
T Consensus 216 ~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 216 VWNPKTGQPLHKIT 229 (399)
T ss_pred EEecCCCceeEEec
Confidence 99999998876555
No 30
>KOG0291|consensus
Probab=99.91 E-value=9.4e-23 Score=162.65 Aligned_cols=172 Identities=24% Similarity=0.464 Sum_probs=152.5
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCC-CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQS-GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
.|..+..+...+..++|+..|.+||.|+.. |.+.+|+-++...+...+.|-..+.++++||||+++++|+.||+|++||
T Consensus 299 lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn 378 (893)
T KOG0291|consen 299 LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWN 378 (893)
T ss_pred EEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEe
Confidence 355666777788899999999999988765 7899999999888888888888888999999999999999999999999
Q ss_pred CCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCc--EEEEEEccCCCEEEEEcCCC-
Q psy10953 82 ANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQ--VWCVCVAPDGDKFVSVGEDK- 150 (181)
Q Consensus 82 ~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~--v~~~~~sp~g~~l~~~~~d~- 150 (181)
... .|++.|+.++|+..|+.+++++-||+|+.||+.+.....++..+.+ ..|++..|.|..+++|+.|.
T Consensus 379 ~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F 458 (893)
T KOG0291|consen 379 TQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSF 458 (893)
T ss_pred ccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceE
Confidence 975 4889999999999999999999999999999999998888875544 66899999999999999987
Q ss_pred cEEEEeCCCCeeEEEcCCCCcchh
Q psy10953 151 AVHMYSYKPEEEVEVNGGGGEEEE 174 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~~~~~~~~~ 174 (181)
.|++|++++|+.+.+++|+.++..
T Consensus 459 ~IfvWS~qTGqllDiLsGHEgPVs 482 (893)
T KOG0291|consen 459 EIFVWSVQTGQLLDILSGHEGPVS 482 (893)
T ss_pred EEEEEEeecCeeeehhcCCCCcce
Confidence 799999999999999999765543
No 31
>KOG0315|consensus
Probab=99.91 E-value=3.3e-23 Score=146.96 Aligned_cols=137 Identities=17% Similarity=0.351 Sum_probs=124.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----------CcccEEE
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG----------HSSWVLS 92 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~----------~~~~v~~ 92 (181)
.-+|++++.|.+||+|...+|.+...+++....+..+++.||++.|++++ ...|++||+++. |..-|.+
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVta 88 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTA 88 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEE
Confidence 34789999999999999999999999999888888999999999888776 458999999753 5566899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 93 TAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+.|..+|+++.+++.||+++|||++...+...+.+..+|++++++|+..-|+++..++.|++||+...
T Consensus 89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred EEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 99999999999999999999999999888888899999999999999999999999999999999654
No 32
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.91 E-value=1e-21 Score=144.77 Aligned_cols=163 Identities=31% Similarity=0.526 Sum_probs=139.8
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..++..+.+++|+|+++++++++.|+.+++|++.+++....+..+...+..+.|+|+++.+++++.++.+++||+.
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 34556777889999999999999999999999999999888777776666666689999999999999999999999997
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.+ |...+.++.|+|+++++++++.++.+++||+.+++....+. |...+.+++++|+++++++++.++.+++
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 161 (289)
T cd00200 82 TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL 161 (289)
T ss_pred cccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEE
Confidence 52 45578999999999999888889999999999877776665 7778999999999999998888999999
Q ss_pred EeCCCCeeEEEc
Q psy10953 155 YSYKPEEEVEVN 166 (181)
Q Consensus 155 ~~~~~~~~~~~~ 166 (181)
|++..++.+...
T Consensus 162 ~d~~~~~~~~~~ 173 (289)
T cd00200 162 WDLRTGKCVATL 173 (289)
T ss_pred EEccccccceeE
Confidence 999866554433
No 33
>KOG0273|consensus
Probab=99.91 E-value=1.7e-22 Score=153.90 Aligned_cols=156 Identities=19% Similarity=0.386 Sum_probs=141.8
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC---------CEEEEeeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG---------HWIASGAL 73 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~---------~~l~~~~~ 73 (181)
++-+++.+-.+|..+.|.|.|++|+++++|+++++|..........+..|...++.+.|+|.| ..+++++.
T Consensus 351 P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~ 430 (524)
T KOG0273|consen 351 PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASF 430 (524)
T ss_pred cceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeec
Confidence 445667788889999999999999999999999999998888888888888888999999964 46899999
Q ss_pred CCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 74 DGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 74 d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
|++|++||+.. +|...|.+++|+|+|+++++|+.||.|.+|+.++++.++.+...+.|..++|+.+|.++..
T Consensus 431 dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~ 510 (524)
T KOG0273|consen 431 DSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGA 510 (524)
T ss_pred CCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEE
Confidence 99999999874 5788999999999999999999999999999999999999998888999999999999999
Q ss_pred EcCCCcEEEEeCC
Q psy10953 146 VGEDKAVHMYSYK 158 (181)
Q Consensus 146 ~~~d~~v~i~~~~ 158 (181)
+..|+.+++-|+.
T Consensus 511 ~~sd~~vcvldlr 523 (524)
T KOG0273|consen 511 CASDGSVCVLDLR 523 (524)
T ss_pred EecCCCceEEEec
Confidence 9999999998874
No 34
>KOG0276|consensus
Probab=99.91 E-value=5.9e-23 Score=161.09 Aligned_cols=159 Identities=23% Similarity=0.441 Sum_probs=144.4
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEE
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINI 79 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i 79 (181)
.+...++.++.++++++.+|..-+++++++|-+|++||-+ ...+.+.|..|.+.+++++|.| |.+.+++++-|++|++
T Consensus 88 ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKV 167 (794)
T KOG0276|consen 88 EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKV 167 (794)
T ss_pred eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEE
Confidence 4566788899999999999999999999999999999986 4467789999999999999999 5689999999999999
Q ss_pred EeCCC--------CCcccEEEEEEcCCCC--EEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcC
Q psy10953 80 FDANT--------GHSSWVLSTAFTRDGK--FFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 80 ~d~~~--------~~~~~v~~~~~s~~~~--~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
|.+.. +|...|+++.|-+.|. +|++|+.|..+++||..+..++.++. |...|..++|+|.=-.+++||+
T Consensus 168 Wslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsE 247 (794)
T KOG0276|consen 168 WSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSE 247 (794)
T ss_pred EEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecC
Confidence 99853 6778899999999774 89999999999999999999998886 8899999999999999999999
Q ss_pred CCcEEEEeCCCC
Q psy10953 149 DKAVHMYSYKPE 160 (181)
Q Consensus 149 d~~v~i~~~~~~ 160 (181)
||+++||+..+.
T Consensus 248 DGTvriWhs~Ty 259 (794)
T KOG0276|consen 248 DGTVRIWNSKTY 259 (794)
T ss_pred CccEEEecCcce
Confidence 999999997653
No 35
>PTZ00421 coronin; Provisional
Probab=99.90 E-value=1.3e-21 Score=156.35 Aligned_cols=166 Identities=15% Similarity=0.258 Sum_probs=132.4
Q ss_pred ceeeeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
.+..+..+...+.+++|+|++ ++|++++.|++|++||+++++....+..+...+.+++|+|+|.+|++++.|+.+++||
T Consensus 117 ~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD 196 (493)
T PTZ00421 117 PIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIID 196 (493)
T ss_pred ceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEE
Confidence 355667788889999999986 6899999999999999999998888877777788999999999999999999999999
Q ss_pred CCCC--------Ccc-cEEEEEEcCCCCEEEEEe----CCCcEEEEecCCCc-eeeeee--cCCcEEEEEEccCCCEEEE
Q psy10953 82 ANTG--------HSS-WVLSTAFTRDGKFFISAS----ADHTVRVWNFARRE-NMHTFK--HADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 82 ~~~~--------~~~-~v~~~~~s~~~~~l~~~~----~d~~i~v~d~~~~~-~~~~~~--~~~~v~~~~~sp~g~~l~~ 145 (181)
++++ |.. .+..+.|.+++..+++++ .|+.|++||++... .+.... ....+....|+++++++++
T Consensus 197 ~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~l 276 (493)
T PTZ00421 197 PRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYI 276 (493)
T ss_pred CCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEE
Confidence 9864 322 234567888888777654 47899999998754 333332 2334666789999999998
Q ss_pred Ec-CCCcEEEEeCCCCeeEEEcCC
Q psy10953 146 VG-EDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 146 ~~-~d~~v~i~~~~~~~~~~~~~~ 168 (181)
++ .|+.|++|++..+..+.....
T Consensus 277 ggkgDg~Iriwdl~~~~~~~~~~~ 300 (493)
T PTZ00421 277 GSKGEGNIRCFELMNERLTFCSSY 300 (493)
T ss_pred EEeCCCeEEEEEeeCCceEEEeec
Confidence 87 599999999988776654433
No 36
>KOG0282|consensus
Probab=99.90 E-value=6.9e-24 Score=161.68 Aligned_cols=161 Identities=17% Similarity=0.384 Sum_probs=145.9
Q ss_pred ceeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVET-GKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
.+.....+...++++.|.| .+.+|++++.|+.|++|++.. +++++.|..|...+..++|+.+|..|++++.|+.+++|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlw 285 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLW 285 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeee
Confidence 4667788999999999999 889999999999999999975 88999999999999999999999999999999999999
Q ss_pred eCCCCC-------cccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 81 DANTGH-------SSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 81 d~~~~~-------~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
|+++|. ...+.++.|.|++ +.+++|+.|+.|+-||+++++.+..+. |-+.|..+.|-++|+++++.+.|+.
T Consensus 286 DtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks 365 (503)
T KOG0282|consen 286 DTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKS 365 (503)
T ss_pred ccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCcc
Confidence 999873 2356889999998 789999999999999999999888886 6788999999999999999999999
Q ss_pred EEEEeCCCCeeE
Q psy10953 152 VHMYSYKPEEEV 163 (181)
Q Consensus 152 v~i~~~~~~~~~ 163 (181)
+++|++....++
T Consensus 366 ~riWe~~~~v~i 377 (503)
T KOG0282|consen 366 VRIWENRIPVPI 377 (503)
T ss_pred EEEEEcCCCccc
Confidence 999999766544
No 37
>KOG1446|consensus
Probab=99.90 E-value=1.5e-21 Score=142.24 Aligned_cols=163 Identities=17% Similarity=0.259 Sum_probs=139.6
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
|+-+..+...|..++.+|-+..+++++.|++|++||++..+....+...+.. ..+|+|.|-.+|++.....|++||++
T Consensus 93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLyD~R 170 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLYDLR 170 (311)
T ss_pred EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCCeEEEEEec
Confidence 4556778889999999999999999999999999999988888777666654 47999999999999888899999997
Q ss_pred CC-------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCC--c-EEEEEEccCCCEEEEE
Q psy10953 84 TG-------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HAD--Q-VWCVCVAPDGDKFVSV 146 (181)
Q Consensus 84 ~~-------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~--~-v~~~~~sp~g~~l~~~ 146 (181)
.- .......+.|||+|++++-++..+.+++.|..++....++. ++. . ....+|+||++++++|
T Consensus 171 s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~g 250 (311)
T KOG1446|consen 171 SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSG 250 (311)
T ss_pred ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEe
Confidence 42 12346789999999999999999999999999998887775 222 1 2478999999999999
Q ss_pred cCCCcEEEEeCCCCeeEEEcCC
Q psy10953 147 GEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+.||+|++|++.++.++....+
T Consensus 251 s~dg~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 251 SDDGTIHVWNLETGKKVAVLRG 272 (311)
T ss_pred cCCCcEEEEEcCCCcEeeEecC
Confidence 9999999999999999887776
No 38
>KOG0640|consensus
Probab=99.90 E-value=4.7e-23 Score=150.38 Aligned_cols=170 Identities=18% Similarity=0.386 Sum_probs=145.2
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE--EEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ--IFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
|+.+..+..++.++.|+|...+|++|+.|++|++||.......+ ........+.+++|+|.|.+|+.|.....+++||
T Consensus 165 IRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYd 244 (430)
T KOG0640|consen 165 IRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYD 244 (430)
T ss_pred EeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEe
Confidence 67778888889999999999999999999999999986332221 1112345678999999999999999999999999
Q ss_pred CCC-----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cC-CcEEEEEEccCCCEEEEEc
Q psy10953 82 ANT-----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HA-DQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 82 ~~~-----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~-~~v~~~~~sp~g~~l~~~~ 147 (181)
+++ +|+..|+++.+++.|++.++++.||.|++||--+.+++.++. |. ..|.++.|+.+|+++.+.+
T Consensus 245 v~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG 324 (430)
T KOG0640|consen 245 VNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSG 324 (430)
T ss_pred ccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecC
Confidence 864 578899999999999999999999999999988888888875 43 4688999999999999999
Q ss_pred CCCcEEEEeCCCCeeEEEcCCCCcch
Q psy10953 148 EDKAVHMYSYKPEEEVEVNGGGGEEE 173 (181)
Q Consensus 148 ~d~~v~i~~~~~~~~~~~~~~~~~~~ 173 (181)
.|..+++|.+.++..+...-|++...
T Consensus 325 ~DS~vkLWEi~t~R~l~~YtGAg~tg 350 (430)
T KOG0640|consen 325 KDSTVKLWEISTGRMLKEYTGAGTTG 350 (430)
T ss_pred CcceeeeeeecCCceEEEEecCCccc
Confidence 99999999999999888777764433
No 39
>KOG0282|consensus
Probab=99.90 E-value=7.9e-23 Score=155.94 Aligned_cols=160 Identities=25% Similarity=0.395 Sum_probs=133.9
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFD 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d 81 (181)
.++....+...|.+++|+++|..+++++.|+.+++||+++|+++..+.. +....++.|.||+ +.|++|+.|+.|..||
T Consensus 250 ~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wD 328 (503)
T KOG0282|consen 250 CLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWD 328 (503)
T ss_pred eehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEe
Confidence 5677788899999999999999999999999999999999999998864 4456799999998 7889999999999999
Q ss_pred CCCC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-----------------------------
Q psy10953 82 ANTG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT----------------------------- 124 (181)
Q Consensus 82 ~~~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~----------------------------- 124 (181)
++++ |.+.|..+.|-++|+.+++.+.|+++++|+.+....+..
T Consensus 329 iRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~ 408 (503)
T KOG0282|consen 329 IRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNY 408 (503)
T ss_pred ccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCce
Confidence 9875 567899999999999999999999999998653211100
Q ss_pred ---e--------------e-c--CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 125 ---F--------------K-H--ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 125 ---~--------------~-~--~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
+ . | .+.-..+.|||||++|++|..||.+.+|++++-..+
T Consensus 409 i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~ 467 (503)
T KOG0282|consen 409 IAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLV 467 (503)
T ss_pred EEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhh
Confidence 0 0 0 122345889999999999999999999999875544
No 40
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.90 E-value=6e-21 Score=140.70 Aligned_cols=164 Identities=30% Similarity=0.512 Sum_probs=139.9
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.++.|+|+++++++++.|+.+++||+++++....+..+...+.++.|+|+++++++++.++.+++||++
T Consensus 86 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~ 165 (289)
T cd00200 86 VRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR 165 (289)
T ss_pred eEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcc
Confidence 44455566678999999999999888889999999999888887777666678899999999988888889999999986
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.+ +...+.++.|+|+++.+++++.++.+++||+..++.+..+ .+...+.+++++|++.++++++.++.+++
T Consensus 166 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i 245 (289)
T cd00200 166 TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRV 245 (289)
T ss_pred ccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEE
Confidence 43 4457889999999999999999999999999988888777 57778999999999888888888999999
Q ss_pred EeCCCCeeEEEcC
Q psy10953 155 YSYKPEEEVEVNG 167 (181)
Q Consensus 155 ~~~~~~~~~~~~~ 167 (181)
|++..+..+....
T Consensus 246 ~~~~~~~~~~~~~ 258 (289)
T cd00200 246 WDLRTGECVQTLS 258 (289)
T ss_pred EEcCCceeEEEcc
Confidence 9998776665444
No 41
>KOG0283|consensus
Probab=99.90 E-value=1e-22 Score=163.64 Aligned_cols=153 Identities=25% Similarity=0.446 Sum_probs=125.1
Q ss_pred eec-cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--------------------------------C---------
Q psy10953 6 KIN-VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET--------------------------------G--------- 43 (181)
Q Consensus 6 ~~~-~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~--------------------------------~--------- 43 (181)
.++ .+...+|++.||+||+|||+||.|+.|+||.+.. .
T Consensus 261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~ 340 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR 340 (712)
T ss_pred ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence 344 5667799999999999999999999999998755 0
Q ss_pred -------------------cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-------CcccEEEEEEcC
Q psy10953 44 -------------------KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG-------HSSWVLSTAFTR 97 (181)
Q Consensus 44 -------------------~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~-------~~~~v~~~~~s~ 97 (181)
+....|..|...+..++||.+ ++|++++-|++|++|++... |..+|++++|+|
T Consensus 341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnP 419 (712)
T KOG0283|consen 341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNP 419 (712)
T ss_pred cccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecc
Confidence 001112223345678899975 56888999999999999753 788999999999
Q ss_pred -CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 98 -DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 98 -~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
|.+++++|+-|+.|+||++...+...-....+-|+++||.|||+..+.|+-+|.+++|+...
T Consensus 420 vDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~ 482 (712)
T KOG0283|consen 420 VDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEG 482 (712)
T ss_pred cCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccC
Confidence 56899999999999999998876555445567899999999999999999999999999754
No 42
>KOG0295|consensus
Probab=99.90 E-value=4.8e-22 Score=147.29 Aligned_cols=154 Identities=24% Similarity=0.389 Sum_probs=138.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC---------------CCE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD---------------GHW 67 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d---------------~~~ 67 (181)
++..+..++.-+..++.+.||.++++++.|.++++|-+.+++....+..|...+.+++|.|. ++.
T Consensus 227 cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~ 306 (406)
T KOG0295|consen 227 CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQV 306 (406)
T ss_pred eEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccE
Confidence 34566677777889999999999999999999999999999888888888888888888763 258
Q ss_pred EEEeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc
Q psy10953 68 IASGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP 138 (181)
Q Consensus 68 l~~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp 138 (181)
+++++.|+++++||+.+ +|.++|..++|+|.|++|+++..|+++++||+++++++.... |+.-++++.|+.
T Consensus 307 l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~ 386 (406)
T KOG0295|consen 307 LGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHK 386 (406)
T ss_pred EEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCC
Confidence 88999999999999975 588999999999999999999999999999999999998886 777899999999
Q ss_pred CCCEEEEEcCCCcEEEEe
Q psy10953 139 DGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 139 ~g~~l~~~~~d~~v~i~~ 156 (181)
+--++++|+-|..+++|.
T Consensus 387 ~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 387 TAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred CCceEEeccccceeeeee
Confidence 999999999999999995
No 43
>KOG0292|consensus
Probab=99.89 E-value=1.6e-22 Score=163.81 Aligned_cols=165 Identities=24% Similarity=0.431 Sum_probs=147.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+.++.....-+-.++|+|..-+++++-..|.|++||.+-+.++..|..|...+..+.|+|.+..|++|+.|-.|++|+..
T Consensus 2 ltkfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 2 LTKFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred cchhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence 34455555567889999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred --------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 84 --------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 84 --------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.+|..+|+.+.|++.--++++++.|.+|+|||..+++++.... |...|+|..|+|....++++|.|.+|++
T Consensus 82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV 161 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV 161 (1202)
T ss_pred cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence 4799999999999999999999999999999999999998886 7778999999999999999999999999
Q ss_pred EeCCCCeeEEEcCCC
Q psy10953 155 YSYKPEEEVEVNGGG 169 (181)
Q Consensus 155 ~~~~~~~~~~~~~~~ 169 (181)
||+. |.+..-..+|
T Consensus 162 WDis-GLRkk~~~pg 175 (1202)
T KOG0292|consen 162 WDIS-GLRKKNKAPG 175 (1202)
T ss_pred Eeec-chhccCCCCC
Confidence 9994 3443333443
No 44
>KOG0265|consensus
Probab=99.89 E-value=1.3e-21 Score=141.97 Aligned_cols=170 Identities=20% Similarity=0.312 Sum_probs=147.0
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCE-EEEeeCCCcEEEEeCCCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHW-IASGALDGIINIFDANTG 85 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~-l~~~~~d~~v~i~d~~~~ 85 (181)
+..+..-|-.+.|.+|++.+++++.|++++.||+++|+....+..|..++..+.-+.-|.. +.+++.|+++++||.++.
T Consensus 86 lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k 165 (338)
T KOG0265|consen 86 LKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKK 165 (338)
T ss_pred eccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeeccc
Confidence 4456667788999999999999999999999999999999999999988877775555654 556899999999999854
Q ss_pred C-------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 H-------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 ~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+ +..+.++.|..++..+.+|+-|+.|++||++......... |.+.|+++..+|+|.++.+-+-|+.+++|++
T Consensus 166 ~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~ 245 (338)
T KOG0265|consen 166 EAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDV 245 (338)
T ss_pred chhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEe
Confidence 2 3457899999999999999999999999999988887775 8999999999999999999999999999998
Q ss_pred CCC---ee-EEEcCCCCcchhhh
Q psy10953 158 KPE---EE-VEVNGGGGEEEEEE 176 (181)
Q Consensus 158 ~~~---~~-~~~~~~~~~~~~~~ 176 (181)
++. ++ +.+..++.-+.|.+
T Consensus 246 rp~~p~~R~v~if~g~~hnfekn 268 (338)
T KOG0265|consen 246 RPFAPSQRCVKIFQGHIHNFEKN 268 (338)
T ss_pred cccCCCCceEEEeecchhhhhhh
Confidence 754 55 77888877777766
No 45
>KOG0318|consensus
Probab=99.89 E-value=3e-21 Score=148.86 Aligned_cols=160 Identities=23% Similarity=0.417 Sum_probs=135.6
Q ss_pred eccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy10953 7 INVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~- 84 (181)
+..+..-+.+++|-|..- ++++|++|.+|.+|+-..-++...+..|..++.++.|+|||..+++.+.||++.+||-.+
T Consensus 143 i~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktg 222 (603)
T KOG0318|consen 143 ITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTG 222 (603)
T ss_pred eeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCc
Confidence 445666678888987654 689999999999999888899888888999999999999999999999999999999754
Q ss_pred ----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee-------------------------------
Q psy10953 85 ----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH------------------------------- 123 (181)
Q Consensus 85 ----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~------------------------------- 123 (181)
+|.+.|.+++|+||++.+++++.|.++++||..+.+.+.
T Consensus 223 e~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~i 302 (603)
T KOG0318|consen 223 EKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTI 302 (603)
T ss_pred cEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEE
Confidence 478899999999999999999999999999975432111
Q ss_pred ------------ee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 124 ------------TF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 124 ------------~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
.+ .|...|+++..+|++++|++|+.||.|.-|+...+..-++.
T Consensus 303 n~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~ 358 (603)
T KOG0318|consen 303 NYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLA 358 (603)
T ss_pred EEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccc
Confidence 11 24557899999999999999999999999999877655443
No 46
>PTZ00420 coronin; Provisional
Probab=99.89 E-value=4.7e-21 Score=154.52 Aligned_cols=138 Identities=14% Similarity=0.203 Sum_probs=118.9
Q ss_pred EeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCCC----------------CCcccEE
Q psy10953 29 GSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDANT----------------GHSSWVL 91 (181)
Q Consensus 29 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~~----------------~~~~~v~ 91 (181)
|+.++.+++|+.........+..|...+.+++|+|+ +.+|++|+.|+.|++||+.. +|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 556788999988776667777778888899999997 78999999999999999853 3567799
Q ss_pred EEEEcCCCCE-EEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 92 STAFTRDGKF-FISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 92 ~~~~s~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
+++|+|++.. +++++.|+.|++||+++++....+.+...|.+++|+|+|+.|++++.|+.|++||+.+++.+...
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 9999999875 57899999999999999887777777788999999999999999999999999999988765433
No 47
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=7.4e-21 Score=160.84 Aligned_cols=157 Identities=22% Similarity=0.409 Sum_probs=131.2
Q ss_pred eeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEE-CCCCCEEEEeeCCCcEEEEe
Q psy10953 4 ISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAY-STDGHWIASGALDGIINIFD 81 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-s~d~~~l~~~~~d~~v~i~d 81 (181)
+..+..+...+++++|+| ++.+|++|+.|++|++||+++++....+..+. .+.++.| +++|.+|++|+.|+.|++||
T Consensus 568 ~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~-~v~~v~~~~~~g~~latgs~dg~I~iwD 646 (793)
T PLN00181 568 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSESGRSLAFGSADHKVYYYD 646 (793)
T ss_pred EEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC-CeEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 455666777899999996 78999999999999999999988877776543 4568888 45799999999999999999
Q ss_pred CCC---------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC------ceeeeee-cCCcEEEEEEccCCCEEEE
Q psy10953 82 ANT---------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR------ENMHTFK-HADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 82 ~~~---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~------~~~~~~~-~~~~v~~~~~sp~g~~l~~ 145 (181)
++. +|...|..+.|. ++.++++++.|+.|++||+... ..+..+. |...+.+++|+|++++|++
T Consensus 647 ~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~las 725 (793)
T PLN00181 647 LRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIAT 725 (793)
T ss_pred CCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEE
Confidence 864 356678999997 6789999999999999998742 3455554 6778899999999999999
Q ss_pred EcCCCcEEEEeCCCCee
Q psy10953 146 VGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 146 ~~~d~~v~i~~~~~~~~ 162 (181)
|+.|+.|++|+.....+
T Consensus 726 gs~D~~v~iw~~~~~~~ 742 (793)
T PLN00181 726 GSETNEVFVYHKAFPMP 742 (793)
T ss_pred EeCCCEEEEEECCCCCc
Confidence 99999999999765433
No 48
>KOG0293|consensus
Probab=99.88 E-value=2.6e-21 Score=145.63 Aligned_cols=165 Identities=22% Similarity=0.374 Sum_probs=128.0
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
-++..+...|..+.||||.++|++++.|..+++||+.+|.....+... +..+.+++|.|||..+++|+.|+.+..||+.
T Consensus 263 ~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD 342 (519)
T KOG0293|consen 263 KTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD 342 (519)
T ss_pred eeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC
Confidence 345667788999999999999999999999999999999988777643 4556789999999999999999999999996
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEE---------------------
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCV--------------------- 134 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~--------------------- 134 (181)
.. ....|.++++++||++++..+.|..|++|+..+......+....+|++.
T Consensus 343 gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LW 422 (519)
T KOG0293|consen 343 GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLW 422 (519)
T ss_pred cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEe
Confidence 43 2345889999999999999999999999987543322222222233333
Q ss_pred -----------------------EEcc-CCCEEEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 135 -----------------------CVAP-DGDKFVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 135 -----------------------~~sp-~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
||.- +..++++||+|+.|+||+...+.++.++.|.
T Consensus 423 Dl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGH 481 (519)
T KOG0293|consen 423 DLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGH 481 (519)
T ss_pred ecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCC
Confidence 3332 2357788888888888888888888777764
No 49
>KOG0285|consensus
Probab=99.88 E-value=1e-21 Score=145.66 Aligned_cols=160 Identities=20% Similarity=0.329 Sum_probs=142.2
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..++.+-..|..+++|+-.-|+++++.|+.|+.||++.+++++.+-.|-..+++++.+|--..|++++.|..+++||.++
T Consensus 187 ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRt 266 (460)
T KOG0285|consen 187 LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT 266 (460)
T ss_pred EeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecc
Confidence 34556777789999999999999999999999999999999988877777789999999999999999999999999974
Q ss_pred --------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 85 --------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 85 --------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
||...|..+.+.|-.-.+++|+.|++|++||++.++.+.+.. |...+.+++++|....|++++.| .|+.|
T Consensus 267 r~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w 345 (460)
T KOG0285|consen 267 RASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQW 345 (460)
T ss_pred cceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceec
Confidence 789999999999977788999999999999999999888876 56679999999999999998876 68999
Q ss_pred eCCCCeeEEE
Q psy10953 156 SYKPEEEVEV 165 (181)
Q Consensus 156 ~~~~~~~~~~ 165 (181)
++..|..+.-
T Consensus 346 ~~p~g~f~~n 355 (460)
T KOG0285|consen 346 KLPEGEFLQN 355 (460)
T ss_pred cCCccchhhc
Confidence 9988766543
No 50
>KOG0293|consensus
Probab=99.88 E-value=1.8e-21 Score=146.55 Aligned_cols=157 Identities=21% Similarity=0.376 Sum_probs=130.7
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK---LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.++.+..+||.+.||++|++||+++.|.+..+|++.... +...+..|...+..+.||||.++|++.+.+..+.+||+
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccC
Confidence 456677889999999999999999999999999875433 34555667777778999999999999999999999999
Q ss_pred CCC---------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 83 NTG---------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 83 ~~~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
.++ +...+.+++|.|||..+++|+.|+.+..||+.... ...+. ...+|+++++++||+++++...|..
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~ 377 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKK 377 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEEEecccc
Confidence 764 23568899999999999999999999999986543 33332 3356999999999999999999999
Q ss_pred EEEEeCCCCeeE
Q psy10953 152 VHMYSYKPEEEV 163 (181)
Q Consensus 152 v~i~~~~~~~~~ 163 (181)
|++|+..+....
T Consensus 378 i~l~~~e~~~dr 389 (519)
T KOG0293|consen 378 IRLYNREARVDR 389 (519)
T ss_pred eeeechhhhhhh
Confidence 999998665443
No 51
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.88 E-value=2.1e-20 Score=158.07 Aligned_cols=152 Identities=18% Similarity=0.330 Sum_probs=125.5
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----cE----EEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEE
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG----KL----EQIFDTRGKFTLSIAYST-DGHWIASGALDGIINI 79 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~----~~----~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i 79 (181)
.+...+.+++|+|+|+++++|+.|++|++|++... .. ...+.. ...+.+++|++ ++.+|++++.|+.|++
T Consensus 481 ~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~las~~~Dg~v~l 559 (793)
T PLN00181 481 NSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELAS-RSKLSGICWNSYIKSQVASSNFEGVVQV 559 (793)
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecc-cCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence 35666899999999999999999999999997532 11 112222 23456789987 4788999999999999
Q ss_pred EeCCC--------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEc-cCCCEEEEEcCC
Q psy10953 80 FDANT--------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVA-PDGDKFVSVGED 149 (181)
Q Consensus 80 ~d~~~--------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s-p~g~~l~~~~~d 149 (181)
||+.+ +|...|.+++|+| ++.+|++++.|+.|++||++++..+..+.....+.++.|+ ++|..+++|+.|
T Consensus 560 Wd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~d 639 (793)
T PLN00181 560 WDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSAD 639 (793)
T ss_pred EECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCC
Confidence 99864 4778899999997 7899999999999999999988888777766789999995 579999999999
Q ss_pred CcEEEEeCCCCe
Q psy10953 150 KAVHMYSYKPEE 161 (181)
Q Consensus 150 ~~v~i~~~~~~~ 161 (181)
+.|++||+....
T Consensus 640 g~I~iwD~~~~~ 651 (793)
T PLN00181 640 HKVYYYDLRNPK 651 (793)
T ss_pred CeEEEEECCCCC
Confidence 999999997653
No 52
>KOG0310|consensus
Probab=99.88 E-value=1.6e-21 Score=148.91 Aligned_cols=153 Identities=18% Similarity=0.360 Sum_probs=132.4
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~---- 84 (181)
....++++.|-.||+++++|...|.|++||+.+...+..+..|...+....|+|++ ..|++|+.|+.+++||+.+
T Consensus 67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~ 146 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ 146 (487)
T ss_pred hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE
Confidence 34568899999999999999999999999988877777888888888889999976 5567788899999999864
Q ss_pred ----CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCC-ceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 85 ----GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARR-ENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 85 ----~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+|+.+|.+.+|+|... .++||+.||+|++||++.. ..+.++.|..+|..+.+-|.|..|++++ .+.|++||+-
T Consensus 147 ~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~ 225 (487)
T KOG0310|consen 147 AELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWDLT 225 (487)
T ss_pred EEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEEec
Confidence 6889999999999754 8899999999999999987 6777888999999999999999999888 4699999998
Q ss_pred CCeeE
Q psy10953 159 PEEEV 163 (181)
Q Consensus 159 ~~~~~ 163 (181)
+|.+.
T Consensus 226 ~G~ql 230 (487)
T KOG0310|consen 226 TGGQL 230 (487)
T ss_pred CCcee
Confidence 66443
No 53
>KOG0316|consensus
Probab=99.88 E-value=8.9e-21 Score=133.85 Aligned_cols=170 Identities=21% Similarity=0.348 Sum_probs=139.1
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++..+...+..+..+.|.-||++.++++.|.+|++|+...+.+++.+..|+..+..++.+.|...|++++.|+.+.+||+
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 34445556677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC--ceeeeee--------------------------
Q psy10953 83 NT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR--ENMHTFK-------------------------- 126 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~-------------------------- 126 (181)
.+ +|...|+.++|+.+...+++++.|.++++||.++. +++..+.
T Consensus 89 ~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvR 168 (307)
T KOG0316|consen 89 NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVR 168 (307)
T ss_pred ccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEE
Confidence 86 47788999999999999999999999999997642 1211111
Q ss_pred -------------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCCCcc
Q psy10953 127 -------------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGGGEE 172 (181)
Q Consensus 127 -------------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~ 172 (181)
...+|++++|++|++...+++-|+.+++.|-.+|+.+....|.+..
T Consensus 169 tydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~ 227 (307)
T KOG0316|consen 169 TYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNM 227 (307)
T ss_pred EEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccc
Confidence 1236777777777777777777777777777777776666665443
No 54
>KOG0289|consensus
Probab=99.88 E-value=1.3e-20 Score=142.59 Aligned_cols=150 Identities=21% Similarity=0.410 Sum_probs=130.8
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC--CceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR--GKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
+..++..|..+..+|.|.||+++++|++..+.|++++..+...... +....+..|+|||..|.+|..|+.+++||+..
T Consensus 299 ~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks 378 (506)
T KOG0289|consen 299 SRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS 378 (506)
T ss_pred cccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC
Confidence 3446667889999999999999999999999999999988776653 23456899999999999999999999999963
Q ss_pred --------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCC--cEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 85 --------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHAD--QVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 85 --------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
+|.+.|..++|+.+|-+|++++.|+.|++||++..+.+.++.... ++.+++|.+.|++++.++.+-.|++
T Consensus 379 ~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~ 458 (506)
T KOG0289|consen 379 QTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYI 458 (506)
T ss_pred ccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEE
Confidence 588999999999999999999999999999999888777776443 5999999999999999987767777
Q ss_pred Ee
Q psy10953 155 YS 156 (181)
Q Consensus 155 ~~ 156 (181)
+.
T Consensus 459 ~~ 460 (506)
T KOG0289|consen 459 CK 460 (506)
T ss_pred Ee
Confidence 66
No 55
>KOG0318|consensus
Probab=99.88 E-value=2e-20 Score=144.35 Aligned_cols=155 Identities=21% Similarity=0.390 Sum_probs=127.4
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE--EEEEecCCceEEEEEECCCCCEEEEeeC----CCcEEEEeCC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL--EQIFDTRGKFTLSIAYSTDGHWIASGAL----DGIINIFDAN 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~s~d~~~l~~~~~----d~~v~i~d~~ 83 (181)
+...+.-..+||.|-++|+|...|+||+||...... ...++.-...+..++|+.|++.|++.+. -|.+.+||.-
T Consensus 58 H~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG 137 (603)
T KOG0318|consen 58 HAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSG 137 (603)
T ss_pred ccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCC
Confidence 344556788999999999999999999999865332 2445555566788999999998887653 2567778742
Q ss_pred C-------------------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy10953 84 T-------------------------------------------------GHSSWVLSTAFTRDGKFFISASADHTVRVW 114 (181)
Q Consensus 84 ~-------------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~ 114 (181)
+ .|...|+++.|+|||.++++++.||++++|
T Consensus 138 ~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iy 217 (603)
T KOG0318|consen 138 NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIY 217 (603)
T ss_pred CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEE
Confidence 1 255679999999999999999999999999
Q ss_pred ecCCCceeeeee----cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 115 NFARRENMHTFK----HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 115 d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
|-.+++.+..+. |.+.|..++|+||++.++++|.|.+++||+..+...+.
T Consensus 218 DGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~ 271 (603)
T KOG0318|consen 218 DGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVS 271 (603)
T ss_pred cCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEE
Confidence 999999888774 78899999999999999999999999999998775543
No 56
>KOG0276|consensus
Probab=99.87 E-value=2.5e-21 Score=152.05 Aligned_cols=166 Identities=24% Similarity=0.440 Sum_probs=147.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+...+++...+++...|=+..+++++|++|..|++|+..+++.+..|..|.+.+.+++.+|...++++++.|-.+++||-
T Consensus 47 mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~w 126 (794)
T KOG0276|consen 47 MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDW 126 (794)
T ss_pred eeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeec
Confidence 34567777888889999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C---------CCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCC--CEEEEEcCC
Q psy10953 83 N---------TGHSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDG--DKFVSVGED 149 (181)
Q Consensus 83 ~---------~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g--~~l~~~~~d 149 (181)
+ .||..+|..++|.|. .+.+++++-|++|++|.+....+..++. |...|+|+++-+-| -++++|+.|
T Consensus 127 e~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD 206 (794)
T KOG0276|consen 127 ENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD 206 (794)
T ss_pred cCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCC
Confidence 5 478999999999995 5799999999999999999888877776 88899999998765 489999999
Q ss_pred CcEEEEeCCCCeeEEEcCC
Q psy10953 150 KAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 150 ~~v~i~~~~~~~~~~~~~~ 168 (181)
..+++||+++..=+..++|
T Consensus 207 ~tiKvWDyQtk~CV~TLeG 225 (794)
T KOG0276|consen 207 LTIKVWDYQTKSCVQTLEG 225 (794)
T ss_pred ceEEEeecchHHHHHHhhc
Confidence 9999999987654444444
No 57
>KOG0313|consensus
Probab=99.87 E-value=5.9e-21 Score=142.20 Aligned_cols=153 Identities=27% Similarity=0.431 Sum_probs=133.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++..+..+...|.++.|++ ...+.+++.|++|+.||+.+++.+..+..... ..++..+|..++|++|+.|..+++||+
T Consensus 252 P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ks-l~~i~~~~~~~Ll~~gssdr~irl~DP 329 (423)
T KOG0313|consen 252 PLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKS-LNCISYSPLSKLLASGSSDRHIRLWDP 329 (423)
T ss_pred ceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcc-eeEeecccccceeeecCCCCceeecCC
Confidence 5778899999999999987 67788999999999999999998877765444 468999999999999999999999999
Q ss_pred CC-----------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCc-eeeeee-cCCcEEEEEEccCCCEEEEEcC
Q psy10953 83 NT-----------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRE-NMHTFK-HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 83 ~~-----------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~-~~~~~~-~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
++ +|.++|.++.|+|... +|++++.|+++++||+++.+ ++..+. |.++|.++.|. ++..+++||.
T Consensus 330 R~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGa 408 (423)
T KOG0313|consen 330 RTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGA 408 (423)
T ss_pred CCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccC
Confidence 74 5888999999999765 78899999999999999876 666664 88899999986 4568999999
Q ss_pred CCcEEEEeCC
Q psy10953 149 DKAVHMYSYK 158 (181)
Q Consensus 149 d~~v~i~~~~ 158 (181)
|++++++...
T Consensus 409 D~~l~i~~~~ 418 (423)
T KOG0313|consen 409 DNKLRIFKGS 418 (423)
T ss_pred cceEEEeccc
Confidence 9999998753
No 58
>KOG0292|consensus
Probab=99.87 E-value=7.4e-21 Score=154.34 Aligned_cols=160 Identities=19% Similarity=0.339 Sum_probs=142.0
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.|.++..+..+++.+.|++.--+++++|+|.+|++|+-++++.+..+..|.+.++|..|+|....+++++-|.+|++||+
T Consensus 85 clftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi 164 (1202)
T KOG0292|consen 85 CLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI 164 (1202)
T ss_pred ehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEee
Confidence 57778889999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred C-------------------------------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce--ee
Q psy10953 83 N-------------------------------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN--MH 123 (181)
Q Consensus 83 ~-------------------------------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~ 123 (181)
. .||...|+-++|+|.--++++|+.|..|++|.+...+. +.
T Consensus 165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvD 244 (1202)
T KOG0292|consen 165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 244 (1202)
T ss_pred cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeeh
Confidence 3 13556678899999999999999999999998865431 22
Q ss_pred ee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 124 TF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 124 ~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
+. .|.+.|.++-|+|..+.+++.|+|+.|++||+.....
T Consensus 245 tcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~ 284 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTS 284 (1202)
T ss_pred hhhcccCCcceEEecCccceeEecCCCccEEEEecccccc
Confidence 22 4888999999999999999999999999999976543
No 59
>KOG0277|consensus
Probab=99.87 E-value=1.3e-20 Score=134.18 Aligned_cols=155 Identities=22% Similarity=0.425 Sum_probs=125.0
Q ss_pred EEEEEEcCC-CCEEEEEeCCCcEEEEeCC-CCcEEEEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCC-------
Q psy10953 14 MWNVVFSPD-DKYVLSGSQSGKINLYGVE-TGKLEQIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDAN------- 83 (181)
Q Consensus 14 ~~~~~~s~~-g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~------- 83 (181)
.++++|+++ .+.+++++.||++++||+. ..+.++.++.|...+.++.|++- ++.+++++.|++|++|+..
T Consensus 63 LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~T 142 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQT 142 (311)
T ss_pred eeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEe
Confidence 689999985 4567899999999999974 44567778888888899999884 5667889999999999975
Q ss_pred -CCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccC-CCEEEEEcCCCcEEEEeCCC
Q psy10953 84 -TGHSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPD-GDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 84 -~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~~ 159 (181)
++|...|..++|+|. ++++++++.|+.+++||++.......++ |..++.++.|+.- .+.+++++.|+.|++||++.
T Consensus 143 f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~ 222 (311)
T KOG0277|consen 143 FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRN 222 (311)
T ss_pred ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhh
Confidence 468888999999995 6799999999999999998754444465 6678999999974 55688899999999999865
Q ss_pred C-eeEEEcCC
Q psy10953 160 E-EEVEVNGG 168 (181)
Q Consensus 160 ~-~~~~~~~~ 168 (181)
- .++.++.+
T Consensus 223 ~r~pl~eL~g 232 (311)
T KOG0277|consen 223 LRTPLFELNG 232 (311)
T ss_pred ccccceeecC
Confidence 3 34443333
No 60
>KOG1407|consensus
Probab=99.87 E-value=1.3e-20 Score=134.65 Aligned_cols=149 Identities=25% Similarity=0.432 Sum_probs=126.4
Q ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------
Q psy10953 14 MWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-------- 84 (181)
Q Consensus 14 ~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-------- 84 (181)
|-.++|+| ...++++++.|++|++||.+.++........+..+ -+.|+|+|++++.++.|..+...|.++
T Consensus 67 vdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~ 145 (313)
T KOG1407|consen 67 VDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ 145 (313)
T ss_pred hhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhc
Confidence 44567776 55678999999999999999999998888777765 689999999999999999999998752
Q ss_pred -----------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee
Q psy10953 85 -----------------------------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH 123 (181)
Q Consensus 85 -----------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 123 (181)
.|..-..++.|+|+|+++++|++|..+.+||+...-+..
T Consensus 146 ~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R 225 (313)
T KOG1407|consen 146 FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICER 225 (313)
T ss_pred ccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhe
Confidence 133334678999999999999999999999998877777
Q ss_pred eee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 124 TFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 124 ~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
.+. +.-+|+.+.||-||++|+++|+|..|-|=+.++|.++
T Consensus 226 ~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~ 266 (313)
T KOG1407|consen 226 CISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRV 266 (313)
T ss_pred eeccccCceEEEEeccCcceeeccCccceEEeEecccCCeE
Confidence 775 5568999999999999999999999988777777665
No 61
>KOG0640|consensus
Probab=99.87 E-value=6.4e-21 Score=139.33 Aligned_cols=156 Identities=19% Similarity=0.326 Sum_probs=130.5
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC------------C------cEEEEEecCCceEEEEEECCCCCE
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET------------G------KLEQIFDTRGKFTLSIAYSTDGHW 67 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~------------~------~~~~~~~~~~~~~~~~~~s~d~~~ 67 (181)
-++.+...+++.+|||||.++++|+.|..|+++|++. + .+++.+-.|.+.+.++.|+|....
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~I 186 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETI 186 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhhe
Confidence 3556777789999999999999999999999999861 1 122223234556779999999999
Q ss_pred EEEeeCCCcEEEEeCCCC----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee----ecCCcEEE
Q psy10953 68 IASGALDGIINIFDANTG----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF----KHADQVWC 133 (181)
Q Consensus 68 l~~~~~d~~v~i~d~~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----~~~~~v~~ 133 (181)
|++++.|+.|+++|..+. ....|.++.|+|.|.+++.|...-.+++||+.+.+++..- +|.+.|.+
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~ 266 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQ 266 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeE
Confidence 999999999999998642 3456899999999999999999999999999998776544 47788999
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+.+|+.|+..++++.||.|++||-....
T Consensus 267 V~Ys~t~~lYvTaSkDG~IklwDGVS~r 294 (430)
T KOG0640|consen 267 VRYSSTGSLYVTASKDGAIKLWDGVSNR 294 (430)
T ss_pred EEecCCccEEEEeccCCcEEeeccccHH
Confidence 9999999999999999999999965543
No 62
>KOG0319|consensus
Probab=99.87 E-value=2.6e-21 Score=154.00 Aligned_cols=156 Identities=22% Similarity=0.390 Sum_probs=134.8
Q ss_pred eeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEE---EEE------ecCCceEEEEEECCCCCEEEEeeCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLE---QIF------DTRGKFTLSIAYSTDGHWIASGALD 74 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~---~~~------~~~~~~~~~~~~s~d~~~l~~~~~d 74 (181)
.....+...+.+++++..+- .+++++.|.++++|++...+.. ..+ ..|+..+.+++++|+.+++++|+.|
T Consensus 405 a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqD 484 (775)
T KOG0319|consen 405 AQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQD 484 (775)
T ss_pred hhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccc
Confidence 34455777788899976554 6789999999999999752211 112 2356678899999999999999999
Q ss_pred CcEEEEeCC--------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEE
Q psy10953 75 GIINIFDAN--------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 75 ~~v~i~d~~--------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~ 145 (181)
+++++|++. .+|+..+.++.|+|..+.++|++.|++|+||.+.++.++.++. |...|..+.|-.+|+.|++
T Consensus 485 ktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS 564 (775)
T KOG0319|consen 485 KTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLIS 564 (775)
T ss_pred cceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEe
Confidence 999999986 4799999999999999999999999999999999999999998 9999999999999999999
Q ss_pred EcCCCcEEEEeCCCC
Q psy10953 146 VGEDKAVHMYSYKPE 160 (181)
Q Consensus 146 ~~~d~~v~i~~~~~~ 160 (181)
++.||.+++|++++.
T Consensus 565 ~~adGliKlWnikt~ 579 (775)
T KOG0319|consen 565 AGADGLIKLWNIKTN 579 (775)
T ss_pred ccCCCcEEEEeccch
Confidence 999999999999764
No 63
>KOG0306|consensus
Probab=99.87 E-value=8.9e-21 Score=151.45 Aligned_cols=161 Identities=26% Similarity=0.473 Sum_probs=133.1
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CcE---E-----EEEecCCceEEEEEECCCCCEEEEeeC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET-----GKL---E-----QIFDTRGKFTLSIAYSTDGHWIASGAL 73 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~-----~~~---~-----~~~~~~~~~~~~~~~s~d~~~l~~~~~ 73 (181)
+..+...+|+++.+||++.+++|+.|++|++||..- +.. + ..+.. ...+.++++||||++|+.+--
T Consensus 450 i~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel-~ddvL~v~~Spdgk~LaVsLL 528 (888)
T KOG0306|consen 450 IRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLEL-EDDVLCVSVSPDGKLLAVSLL 528 (888)
T ss_pred hhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEec-cccEEEEEEcCCCcEEEEEec
Confidence 345677799999999999999999999999998631 211 1 12222 334679999999999999999
Q ss_pred CCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEEE
Q psy10953 74 DGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 74 d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~ 144 (181)
|++|++|=+.+ ||.-+|.++.+|||+++++||++|++|++|-+.-+.+-.++ .|.+.|.++-|-|+..+++
T Consensus 529 dnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FF 608 (888)
T KOG0306|consen 529 DNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFF 608 (888)
T ss_pred cCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEE
Confidence 99999997764 79999999999999999999999999999998888777666 4889999999999999999
Q ss_pred EEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 145 SVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
++|.|+.|+-||-...+.+..+.+
T Consensus 609 t~gKD~kvKqWDg~kFe~iq~L~~ 632 (888)
T KOG0306|consen 609 TCGKDGKVKQWDGEKFEEIQKLDG 632 (888)
T ss_pred EecCcceEEeechhhhhhheeecc
Confidence 999999999998655444433333
No 64
>KOG0275|consensus
Probab=99.86 E-value=3.4e-21 Score=141.64 Aligned_cols=156 Identities=33% Similarity=0.499 Sum_probs=134.5
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT------- 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~------- 84 (181)
.+.+++||.|...+|+|+.||.|++|.+++|++++.|. .|..-+.++.||.|+..+++++.|.++++--+++
T Consensus 265 aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEf 344 (508)
T KOG0275|consen 265 AVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEF 344 (508)
T ss_pred ceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHh
Confidence 47899999999999999999999999999999998887 5666678999999999999999999999998864
Q ss_pred -CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC---CcEEEEEEccC-CCEEEEEcCCCcEEEEeCCC
Q psy10953 85 -GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA---DQVWCVCVAPD-GDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 85 -~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~~ 159 (181)
+|.++|+.+.|+++|.++++++.||+|++|+.++.+++.+++.. -+|+++-+-|. ...++++...++|++-++.
T Consensus 345 rGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q- 423 (508)
T KOG0275|consen 345 RGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ- 423 (508)
T ss_pred cCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-
Confidence 68899999999999999999999999999999999998888632 35777766664 5678888888999999984
Q ss_pred CeeEEEcCCC
Q psy10953 160 EEEVEVNGGG 169 (181)
Q Consensus 160 ~~~~~~~~~~ 169 (181)
|+.++...-|
T Consensus 424 GQvVrsfsSG 433 (508)
T KOG0275|consen 424 GQVVRSFSSG 433 (508)
T ss_pred ceEEeeeccC
Confidence 5666544443
No 65
>KOG0647|consensus
Probab=99.86 E-value=3e-20 Score=135.00 Aligned_cols=151 Identities=21% Similarity=0.386 Sum_probs=123.7
Q ss_pred eccCeee-EEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CcEEEE-EecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 7 INVGPVD-MWNVVFSP-DDKYVLSGSQSGKINLYGVET-GKLEQI-FDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 7 ~~~~~~~-~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~-~~~~~~-~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+..+|.+ ++.++||| ....+++++.|++||+|+++. |..... ...+...+.+++|+.||..+++|+.|+.+++||+
T Consensus 22 v~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 22 VPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred cCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 3334443 79999999 556667999999999999975 555542 2345667889999999999999999999999999
Q ss_pred CCC-------CcccEEEEEEcCCCC--EEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 83 NTG-------HSSWVLSTAFTRDGK--FFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 83 ~~~-------~~~~v~~~~~s~~~~--~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
.++ |...|..+.|-+... .|+||+-|+++++||++...++.++..+++++++.. -...++.+..++.|.
T Consensus 102 ~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv--~~pm~vVata~r~i~ 179 (347)
T KOG0647|consen 102 ASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADV--LYPMAVVATAERHIA 179 (347)
T ss_pred cCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhc--cCceeEEEecCCcEE
Confidence 865 677888888877654 899999999999999999999999999999988754 345677788899999
Q ss_pred EEeCCC
Q psy10953 154 MYSYKP 159 (181)
Q Consensus 154 i~~~~~ 159 (181)
+|++..
T Consensus 180 vynL~n 185 (347)
T KOG0647|consen 180 VYNLEN 185 (347)
T ss_pred EEEcCC
Confidence 999843
No 66
>KOG0267|consensus
Probab=99.86 E-value=3.6e-22 Score=158.69 Aligned_cols=161 Identities=21% Similarity=0.381 Sum_probs=144.8
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.|..+..++..+-++.|+++..+|++|+.+|+|++||++..+..+.+..+-..+.++.|+|-+.+++.|+.|...++||.
T Consensus 62 ~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~ 141 (825)
T KOG0267|consen 62 AITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDI 141 (825)
T ss_pred hhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhh
Confidence 35567888899999999999999999999999999999999988877777666678999999999999999999999999
Q ss_pred CC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 83 NT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
+. +|...+..+.|+|+|++++.++.|..+++||+..++.+..|. |.+.+..+.|+|..-.+++||.|+.++
T Consensus 142 Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~ 221 (825)
T KOG0267|consen 142 RKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVR 221 (825)
T ss_pred hccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceee
Confidence 72 455668889999999999999999999999999999999998 889999999999999999999999999
Q ss_pred EEeCCCCeeE
Q psy10953 154 MYSYKPEEEV 163 (181)
Q Consensus 154 i~~~~~~~~~ 163 (181)
+|++++.+.+
T Consensus 222 f~dletfe~I 231 (825)
T KOG0267|consen 222 FWDLETFEVI 231 (825)
T ss_pred eeccceeEEe
Confidence 9999765443
No 67
>KOG0289|consensus
Probab=99.86 E-value=3e-20 Score=140.60 Aligned_cols=157 Identities=18% Similarity=0.326 Sum_probs=139.8
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+..+.|+|+...+++++.|..|++|.............|...+..+..+|.|.+|++++.|+...+.|++
T Consensus 254 l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~ 333 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDIS 333 (506)
T ss_pred hhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEcc
Confidence 44566788999999999999999999999999999988777666666777788899999999999999999999999988
Q ss_pred CCCc----------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 84 TGHS----------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 84 ~~~~----------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
++.. ..+.+.+|+|||..|.++..|+.+++||+..+.....|+ |.++|..++|+.+|-++++++.|+.|
T Consensus 334 ~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V 413 (506)
T KOG0289|consen 334 SGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSV 413 (506)
T ss_pred CCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeE
Confidence 6531 236788999999999999999999999999998888886 89999999999999999999999999
Q ss_pred EEEeCCCC
Q psy10953 153 HMYSYKPE 160 (181)
Q Consensus 153 ~i~~~~~~ 160 (181)
++||++.-
T Consensus 414 ~lwDLRKl 421 (506)
T KOG0289|consen 414 KLWDLRKL 421 (506)
T ss_pred EEEEehhh
Confidence 99998653
No 68
>KOG0310|consensus
Probab=99.86 E-value=4.9e-20 Score=140.87 Aligned_cols=154 Identities=19% Similarity=0.366 Sum_probs=129.0
Q ss_pred eeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEEEeC
Q psy10953 5 SKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINIFDA 82 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d~ 82 (181)
..+..+...+....|+|.++ .+++|++|+.+++||+.+......+..|.+.+.+.+++|... .+++|+.||+|++||+
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~Dt 183 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDT 183 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEe
Confidence 44566777788899998655 567888999999999998887557778899999999999765 6788999999999999
Q ss_pred CCC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-ceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 83 NTG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-ENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 83 ~~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
+.. |..+|..+-+-|.|..+++++ ...+++||+.++ +.+.... |...|+|+++..++..|+++|.|+.|
T Consensus 184 R~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~V 262 (487)
T KOG0310|consen 184 RSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHV 262 (487)
T ss_pred ccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccce
Confidence 753 566788899999999999888 458999999854 4454444 88899999999999999999999999
Q ss_pred EEEeCCC
Q psy10953 153 HMYSYKP 159 (181)
Q Consensus 153 ~i~~~~~ 159 (181)
++|++..
T Consensus 263 KVfd~t~ 269 (487)
T KOG0310|consen 263 KVFDTTN 269 (487)
T ss_pred EEEEccc
Confidence 9999643
No 69
>KOG0643|consensus
Probab=99.86 E-value=7e-20 Score=131.31 Aligned_cols=153 Identities=31% Similarity=0.460 Sum_probs=121.6
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC---------------------------------
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG--------------------------------- 53 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--------------------------------- 53 (181)
...+...+|+++++-+.+++++|+.|.++++||+++|+.+..+....
T Consensus 48 y~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi 127 (327)
T KOG0643|consen 48 YDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI 127 (327)
T ss_pred ecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence 34566779999999999999999999999999999998765443210
Q ss_pred --------------------ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC---------CcccEEEEEEcCCCCEEEE
Q psy10953 54 --------------------KFTLSIAYSTDGHWIASGALDGIINIFDANTG---------HSSWVLSTAFTRDGKFFIS 104 (181)
Q Consensus 54 --------------------~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---------~~~~v~~~~~s~~~~~l~~ 104 (181)
.-+..+-|+|-++.|++|..||.+..||++++ |...|+.++++|+..++++
T Consensus 128 ~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT 207 (327)
T KOG0643|consen 128 RDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT 207 (327)
T ss_pred cCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEe
Confidence 01124567777888899999999999999864 5678999999999999999
Q ss_pred EeCCCcEEEEecCCCceeeee--------------------------------------------------------ecC
Q psy10953 105 ASADHTVRVWNFARRENMHTF--------------------------------------------------------KHA 128 (181)
Q Consensus 105 ~~~d~~i~v~d~~~~~~~~~~--------------------------------------------------------~~~ 128 (181)
++.|.+.++||+.+.+.+.++ .|-
T Consensus 208 ~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHF 287 (327)
T KOG0643|consen 208 GSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHF 287 (327)
T ss_pred cccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccc
Confidence 999999999997532211111 134
Q ss_pred CcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 129 DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 129 ~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
++|++++|+|+|+.+++|++||.|++..+..
T Consensus 288 GPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 288 GPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred cCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 5789999999999999999999999987654
No 70
>KOG0973|consensus
Probab=99.85 E-value=4.1e-20 Score=152.23 Aligned_cols=152 Identities=24% Similarity=0.401 Sum_probs=129.9
Q ss_pred CeeeEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCC------------cEEEEEecCCceEEEEEECCCCCEEEEeeCCC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGS--QSGKINLYGVETG------------KLEQIFDTRGKFTLSIAYSTDGHWIASGALDG 75 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~--~d~~i~~~d~~~~------------~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~ 75 (181)
+...++.++.+|||..++||+ .|+.+++|+.+.- +.+.....|...+.|+.|+|||++||+|+.|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 455689999999999999999 8999999976422 11122233556678999999999999999999
Q ss_pred cEEEEeCCC--------------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cC
Q psy10953 76 IINIFDANT--------------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HA 128 (181)
Q Consensus 76 ~v~i~d~~~--------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 128 (181)
.|.+|+... +|...|..+.|+|++.+|++++.|.+|.+||.++.+.+..+. |.
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~ 171 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQ 171 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeeccc
Confidence 999998651 366778999999999999999999999999999998887776 88
Q ss_pred CcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 129 DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 129 ~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
..|-++.|.|-|++|++-+.|+.|++|+....+
T Consensus 172 s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~ 204 (942)
T KOG0973|consen 172 SLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG 204 (942)
T ss_pred ccccceEECCccCeeeeecCCceEEEEEcccce
Confidence 999999999999999999999999999976543
No 71
>KOG0639|consensus
Probab=99.85 E-value=8.7e-21 Score=146.02 Aligned_cols=159 Identities=21% Similarity=0.408 Sum_probs=130.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-c--EEEEEe--cCCceEEEEEECCCCCEEEEeeCCCcE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG-K--LEQIFD--TRGKFTLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-~--~~~~~~--~~~~~~~~~~~s~d~~~l~~~~~d~~v 77 (181)
+|..+.-++. |..+.+|...++++||+ .|.|++||+... . .+..+. ..+.++.++.+.|||+.|++|+.-.++
T Consensus 412 q~~tL~HGEv-VcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastl 489 (705)
T KOG0639|consen 412 QINTLAHGEV-VCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTL 489 (705)
T ss_pred hhhhhccCcE-EEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecccccee
Confidence 4555555555 78899999999998887 789999999532 1 122222 245567889999999999999999999
Q ss_pred EEEeCCCCC----------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEE
Q psy10953 78 NIFDANTGH----------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 78 ~i~d~~~~~----------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~ 146 (181)
.|||+.... .....+++.+||.+.+++++.||+|.|||+.+...+.+++ |++.+.|+.+++||..|.+|
T Consensus 490 siWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTG 569 (705)
T KOG0639|consen 490 SIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTG 569 (705)
T ss_pred eeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecC
Confidence 999986421 1234678899999999999999999999999999999987 99999999999999999999
Q ss_pred cCCCcEEEEeCCCCeeE
Q psy10953 147 GEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~~~ 163 (181)
+.|+.|+.||++++.++
T Consensus 570 GlDntvRcWDlregrql 586 (705)
T KOG0639|consen 570 GLDNTVRCWDLREGRQL 586 (705)
T ss_pred CCccceeehhhhhhhhh
Confidence 99999999999876543
No 72
>KOG0296|consensus
Probab=99.85 E-value=2.7e-19 Score=132.84 Aligned_cols=165 Identities=20% Similarity=0.309 Sum_probs=145.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..++.+...|.++.||.||.+||||+.+|.|++|+..++.....+......+.-++|+|.+..|++|+.||.+.+|.+.
T Consensus 99 ~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip 178 (399)
T KOG0296|consen 99 AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP 178 (399)
T ss_pred eeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECC
Confidence 45677788889999999999999999999999999999998877665455556679999999999999999999999986
Q ss_pred C--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 84 T--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
. +|...+++=.|.|+|+.++++..|++|++||++++.+++.+. ......++.++..+..++.|+.++.++
T Consensus 179 ~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~ 258 (399)
T KOG0296|consen 179 SQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVAC 258 (399)
T ss_pred CcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEE
Confidence 5 577777888899999999999999999999999999888775 334577889999999999999999999
Q ss_pred EEeCCCCeeEEEcCC
Q psy10953 154 MYSYKPEEEVEVNGG 168 (181)
Q Consensus 154 i~~~~~~~~~~~~~~ 168 (181)
+-+..++.-+...++
T Consensus 259 ~~~~~sgKVv~~~n~ 273 (399)
T KOG0296|consen 259 GVNNGSGKVVNCNNG 273 (399)
T ss_pred EEccccceEEEecCC
Confidence 999999888877775
No 73
>KOG0277|consensus
Probab=99.85 E-value=3e-20 Score=132.36 Aligned_cols=157 Identities=20% Similarity=0.339 Sum_probs=132.6
Q ss_pred ceeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~ 80 (181)
+|..++-++.+|+++.|++ +++.+++++.|++|++|+....+-++.+..+...++...|+|. ++.+++++.|+.+++|
T Consensus 96 Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lw 175 (311)
T KOG0277|consen 96 PIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLW 175 (311)
T ss_pred chhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEE
Confidence 6777777888999999997 4556788999999999999888888899999999999999994 6889999999999999
Q ss_pred eCCCC--------CcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCc-eeeee-ecCCcEEEEEEccCC-CEEEEEcC
Q psy10953 81 DANTG--------HSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRE-NMHTF-KHADQVWCVCVAPDG-DKFVSVGE 148 (181)
Q Consensus 81 d~~~~--------~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~-~~~~~-~~~~~v~~~~~sp~g-~~l~~~~~ 148 (181)
|++.. |...+.++.|+. +.+.++|++.|+.|+.||++.-+ ++..+ .|.-.|+.+.|||.. ..|++++.
T Consensus 176 dvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasY 255 (311)
T KOG0277|consen 176 DVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASY 255 (311)
T ss_pred EecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccc
Confidence 98742 555678888887 55789999999999999998754 34444 377789999999975 46889999
Q ss_pred CCcEEEEeCCC
Q psy10953 149 DKAVHMYSYKP 159 (181)
Q Consensus 149 d~~v~i~~~~~ 159 (181)
|-++++|+...
T Consensus 256 DmT~riw~~~~ 266 (311)
T KOG0277|consen 256 DMTVRIWDPER 266 (311)
T ss_pred cceEEeccccc
Confidence 99999999863
No 74
>KOG0281|consensus
Probab=99.85 E-value=9.2e-21 Score=140.35 Aligned_cols=157 Identities=21% Similarity=0.389 Sum_probs=128.7
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...|.++.| +.+.+++|+.|.+|++||.++++.+..+.+|...+..+.|+ ..++++.+.|.++.+||..
T Consensus 230 ~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 230 LKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred HHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEecc
Confidence 4456777777878777 67799999999999999999999998888888888888886 4679999999999999975
Q ss_pred C-----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 84 T-----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 84 ~-----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
. ||...|+.+.|+ .+++++++.|.+|++|++.+.+.+.++. |.-.|-|+ .-.|+++++||.|++
T Consensus 306 sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIACl--QYr~rlvVSGSSDnt 381 (499)
T KOG0281|consen 306 SPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNT 381 (499)
T ss_pred CchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceeh--hccCeEEEecCCCce
Confidence 3 577788888775 4599999999999999999988887775 55556554 347889999999999
Q ss_pred EEEEeCCCCeeEEEcCC
Q psy10953 152 VHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 152 v~i~~~~~~~~~~~~~~ 168 (181)
|++|++..|.-++++.|
T Consensus 382 IRlwdi~~G~cLRvLeG 398 (499)
T KOG0281|consen 382 IRLWDIECGACLRVLEG 398 (499)
T ss_pred EEEEeccccHHHHHHhc
Confidence 99999988766665555
No 75
>KOG0283|consensus
Probab=99.84 E-value=9.6e-20 Score=146.69 Aligned_cols=163 Identities=16% Similarity=0.352 Sum_probs=133.2
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINIFD 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d 81 (181)
++..+..+..++.+++||.+ ++|++++.|+|||+|.+...+++..|. |..+|.|++|+| |.++|++|+-|+.++||+
T Consensus 361 P~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWs 438 (712)
T KOG0283|consen 361 PFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWS 438 (712)
T ss_pred chhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEee
Confidence 45567778889999999955 678899999999999999999999986 677788999999 679999999999999999
Q ss_pred CCCCC-------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee---c------CCcEEEEEEccCC-CEEE
Q psy10953 82 ANTGH-------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK---H------ADQVWCVCVAPDG-DKFV 144 (181)
Q Consensus 82 ~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~------~~~v~~~~~sp~g-~~l~ 144 (181)
+...+ ...|++++|+|+|+..+.|+.+|.+++|+....+....++ + ..+|+++-|.|.. ..++
T Consensus 439 I~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vL 518 (712)
T KOG0283|consen 439 ISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVL 518 (712)
T ss_pred cCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEE
Confidence 86432 3568999999999999999999999999988765544332 1 2369999988753 3577
Q ss_pred EEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 145 SVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
+.+.|.+|+|||......+....
T Consensus 519 VTSnDSrIRI~d~~~~~lv~KfK 541 (712)
T KOG0283|consen 519 VTSNDSRIRIYDGRDKDLVHKFK 541 (712)
T ss_pred EecCCCceEEEeccchhhhhhhc
Confidence 78889999999996554444333
No 76
>KOG0973|consensus
Probab=99.84 E-value=1.1e-19 Score=149.75 Aligned_cols=159 Identities=21% Similarity=0.344 Sum_probs=139.2
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+....+..+..+|.++.|+|++.+|++++.|.+|.+|+.++.+.+..+..|...+..+.|+|-|++|++-+.|+++++|.
T Consensus 120 k~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 120 KVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred eEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEE
Confidence 56677888999999999999999999999999999999999999999999988899999999999999999999999998
Q ss_pred CCC------------------------------------------------------------CCcccEEEEEEcCC---
Q psy10953 82 ANT------------------------------------------------------------GHSSWVLSTAFTRD--- 98 (181)
Q Consensus 82 ~~~------------------------------------------------------------~~~~~v~~~~~s~~--- 98 (181)
... ||...+..++|+|.
T Consensus 200 t~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe 279 (942)
T KOG0973|consen 200 TSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFE 279 (942)
T ss_pred cccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhc
Confidence 421 35567788888882
Q ss_pred --CC------------EEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 99 --GK------------FFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 99 --~~------------~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.+ .+++|+.|+.|.||.....+++.... ....|..++|+|||..|+++|.||.|.+..+..+
T Consensus 280 ~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 280 RNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred cccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 12 57889999999999998888877665 4567999999999999999999999999998653
No 77
>KOG0269|consensus
Probab=99.84 E-value=5.9e-20 Score=147.06 Aligned_cols=153 Identities=19% Similarity=0.341 Sum_probs=128.3
Q ss_pred eeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCC
Q psy10953 6 KINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDAN 83 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~ 83 (181)
-+.-++-.+.++.|++- ..+|++|++||+|++||++..+-...+......+..+.|+|. +..|+++...|.+.+||++
T Consensus 128 ~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR 207 (839)
T KOG0269|consen 128 VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLR 207 (839)
T ss_pred HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeecc
Confidence 33445566788999875 456789999999999999988888888777777889999994 6889999999999999997
Q ss_pred C---------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCE-EEEEc--CC
Q psy10953 84 T---------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDK-FVSVG--ED 149 (181)
Q Consensus 84 ~---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~-l~~~~--~d 149 (181)
. .|.+.|.++.|+|++.+||||+.|+.|+|||+.+.+ ...++....++.++.|=|..++ |++++ .|
T Consensus 208 qp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~d 287 (839)
T KOG0269|consen 208 QPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVD 287 (839)
T ss_pred CchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhcccc
Confidence 3 589999999999999999999999999999998643 4556666678999999998776 56655 47
Q ss_pred CcEEEEeCC
Q psy10953 150 KAVHMYSYK 158 (181)
Q Consensus 150 ~~v~i~~~~ 158 (181)
-.|++||+.
T Consensus 288 tsV~VWDvr 296 (839)
T KOG0269|consen 288 TSVHVWDVR 296 (839)
T ss_pred ceEEEEeec
Confidence 799999984
No 78
>KOG0772|consensus
Probab=99.84 E-value=8.6e-20 Score=140.76 Aligned_cols=154 Identities=18% Similarity=0.310 Sum_probs=115.1
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE-----EEEEecCCc---------------------------
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL-----EQIFDTRGK--------------------------- 54 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~-----~~~~~~~~~--------------------------- 54 (181)
+..+..-|+.+++.|.|.++++|+.|.+|++||+..-.. .++.....+
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D 242 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD 242 (641)
T ss_pred ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc
Confidence 344566689999999999999999999999999853200 000000111
Q ss_pred ---------------------------eEEEEEECCCC-CEEEEeeCCCcEEEEeCCCC--------------CcccEEE
Q psy10953 55 ---------------------------FTLSIAYSTDG-HWIASGALDGIINIFDANTG--------------HSSWVLS 92 (181)
Q Consensus 55 ---------------------------~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~~--------------~~~~v~~ 92 (181)
.+.+.+|+|+. ..|++.+.||++++||+... ..-.+..
T Consensus 243 RdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ts 322 (641)
T KOG0772|consen 243 RDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTS 322 (641)
T ss_pred cCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCcee
Confidence 12356777765 45778888999999998632 2335788
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCce--eeee--ecCC--cEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 93 TAFTRDGKFFISASADHTVRVWNFARREN--MHTF--KHAD--QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~--~~~~--~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
++|+|+|+++++++.||.|.+|+...... ...+ .|.. .|.|+.||+||++|++-+.|+.+++||++..
T Consensus 323 C~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 323 CAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF 396 (641)
T ss_pred eecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc
Confidence 99999999999999999999999865332 1122 2544 7999999999999999999999999998654
No 79
>KOG0643|consensus
Probab=99.84 E-value=7.7e-19 Score=126.00 Aligned_cols=158 Identities=13% Similarity=0.233 Sum_probs=138.2
Q ss_pred CcceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 1 MKQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
|++| .++.++-.+..+.+..+|.+|++++.|.+..+|-..+|+.+..+..|...++++..+-+.+++++|+.|.++++|
T Consensus 1 mrpi-~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLW 79 (327)
T KOG0643|consen 1 MRPI-LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLW 79 (327)
T ss_pred CCcc-ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEE
Confidence 4444 467788889999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred eCCCC-------------------------------------------------------------CcccEEEEEEcCCC
Q psy10953 81 DANTG-------------------------------------------------------------HSSWVLSTAFTRDG 99 (181)
Q Consensus 81 d~~~~-------------------------------------------------------------~~~~v~~~~~s~~~ 99 (181)
|..++ +.+.++.+-|+|-+
T Consensus 80 Dv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~ 159 (327)
T KOG0643|consen 80 DVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG 159 (327)
T ss_pred EcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccC
Confidence 97632 11245667899999
Q ss_pred CEEEEEeCCCcEEEEecCCCceeeee--ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 100 KFFISASADHTVRVWNFARRENMHTF--KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 100 ~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+++++|..+|.|..||.+++..+... .|...|+.+.++||..+++++|.|.+.++||..+
T Consensus 160 ~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t 221 (327)
T KOG0643|consen 160 ETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT 221 (327)
T ss_pred CEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccc
Confidence 99999999999999999998655544 3778999999999999999999999999999754
No 80
>KOG0316|consensus
Probab=99.83 E-value=1.6e-19 Score=127.50 Aligned_cols=111 Identities=18% Similarity=0.296 Sum_probs=94.4
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS 87 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~ 87 (181)
..+--++.+++.+.|...+++++.|+.+.+||+.+|+..+.|..|...+..+.|..+...+++|+.|.++++||-+....
T Consensus 56 sghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ 135 (307)
T KOG0316|consen 56 SGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF 135 (307)
T ss_pred cCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCC
Confidence 34455678999999999999999999999999999999999999999999999999999999999999999999865432
Q ss_pred ----------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc
Q psy10953 88 ----------SWVLSTAFTRDGKFFISASADHTVRVWNFARRE 120 (181)
Q Consensus 88 ----------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 120 (181)
..|.++. -.+..+++|+.||+++.||++.+.
T Consensus 136 ePiQildea~D~V~Si~--v~~heIvaGS~DGtvRtydiR~G~ 176 (307)
T KOG0316|consen 136 EPIQILDEAKDGVSSID--VAEHEIVAGSVDGTVRTYDIRKGT 176 (307)
T ss_pred CccchhhhhcCceeEEE--ecccEEEeeccCCcEEEEEeecce
Confidence 2343433 346788999999999999998653
No 81
>KOG0302|consensus
Probab=99.83 E-value=1.7e-19 Score=134.46 Aligned_cols=159 Identities=24% Similarity=0.368 Sum_probs=129.4
Q ss_pred cceeeeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcEEE---EEecCCceEEEEEECCCC-CEEEEeeCCCc
Q psy10953 2 KQISKINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGKLEQ---IFDTRGKFTLSIAYSTDG-HWIASGALDGI 76 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~ 76 (181)
++|.++..+...=+.++|||- ...|++|.--+.|++|...++.... -|..|...+..++|||.. ..|++++.|+.
T Consensus 202 ~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dgs 281 (440)
T KOG0302|consen 202 RPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGS 281 (440)
T ss_pred CceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCce
Confidence 567777887777799999993 2347788777899999988776542 234467778889999965 67889999999
Q ss_pred EEEEeCCCC----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC---Cceeeeee-cCCcEEEEEEccCC-C
Q psy10953 77 INIFDANTG----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFAR---RENMHTFK-HADQVWCVCVAPDG-D 141 (181)
Q Consensus 77 v~i~d~~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~-~~~~v~~~~~sp~g-~ 141 (181)
|+|||++.+ |.+.|+.+.|+.+-.+|++|+.||+++|||++. ++++.+++ |..+|+++.|+|.. .
T Consensus 282 IrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s 361 (440)
T KOG0302|consen 282 IRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDS 361 (440)
T ss_pred EEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCc
Confidence 999999854 566788999999888999999999999999986 45677776 78899999999965 4
Q ss_pred EEEEEcCCCcEEEEeCCCC
Q psy10953 142 KFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~~ 160 (181)
.|++++.|++|.+||+..+
T Consensus 362 ~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 362 VIAASGEDNQITIWDLSVE 380 (440)
T ss_pred eEEeccCCCcEEEEEeecc
Confidence 6788888999999999543
No 82
>KOG0305|consensus
Probab=99.83 E-value=7.7e-19 Score=137.68 Aligned_cols=156 Identities=18% Similarity=0.354 Sum_probs=133.4
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-CCEEEEe--eCCCcEEEEeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-GHWIASG--ALDGIINIFDAN 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-~~~l~~~--~~d~~v~i~d~~ 83 (181)
++.+..+|..+.|++|++++|+|+.|..+.+||.........+..|...+..++|+|- ...||+| +.|+.+++||..
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~ 376 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN 376 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence 6778889999999999999999999999999999777777777778888999999994 5677875 569999999998
Q ss_pred CCC-------cccEEEEEEcCCCCEEEE-Ee-CCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 84 TGH-------SSWVLSTAFTRDGKFFIS-AS-ADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 84 ~~~-------~~~v~~~~~s~~~~~l~~-~~-~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
+++ ...|..+.|++..+-+++ .+ .+..|.||+..+.+.+..+. |..+|..+++||||..+++++.|.+++
T Consensus 377 ~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlr 456 (484)
T KOG0305|consen 377 TGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLR 456 (484)
T ss_pred CCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEE
Confidence 764 467999999999865544 33 46789999999887777775 899999999999999999999999999
Q ss_pred EEeCCCCee
Q psy10953 154 MYSYKPEEE 162 (181)
Q Consensus 154 i~~~~~~~~ 162 (181)
+|++-...+
T Consensus 457 fw~~f~~~~ 465 (484)
T KOG0305|consen 457 FWNLFDERP 465 (484)
T ss_pred eccccCCCC
Confidence 999876533
No 83
>KOG1274|consensus
Probab=99.83 E-value=9.2e-19 Score=142.44 Aligned_cols=150 Identities=17% Similarity=0.315 Sum_probs=131.5
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC---
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH--- 86 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--- 86 (181)
...++.+++|+.+|+++|.|++|-.|++.++.+......+..+...+.++.|+|.++.||+.+.||.|++||+..+.
T Consensus 95 ftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~ 174 (933)
T KOG1274|consen 95 FTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK 174 (933)
T ss_pred eeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh
Confidence 34557889999999999999999999999999998888888888889999999999999999999999999987531
Q ss_pred -------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 87 -------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 87 -------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
...+..++|+|+|..++..+.|+.|++|+.........+. +...+.++.|+|+|+|||+++.+|
T Consensus 175 tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g 254 (933)
T KOG1274|consen 175 TLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDG 254 (933)
T ss_pred hcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCC
Confidence 2345678999998888888889999999999887766653 344589999999999999999999
Q ss_pred cEEEEeCCC
Q psy10953 151 AVHMYSYKP 159 (181)
Q Consensus 151 ~v~i~~~~~ 159 (181)
.|.|||.++
T Consensus 255 ~I~vWnv~t 263 (933)
T KOG1274|consen 255 QILVWNVDT 263 (933)
T ss_pred cEEEEeccc
Confidence 999999984
No 84
>KOG0641|consensus
Probab=99.83 E-value=1.6e-18 Score=122.19 Aligned_cols=151 Identities=19% Similarity=0.354 Sum_probs=117.5
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE--E---EEEecCCceEEEEEE-----------------------
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL--E---QIFDTRGKFTLSIAY----------------------- 61 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~--~---~~~~~~~~~~~~~~~----------------------- 61 (181)
+...+++.+|||+|+++++|++|++|++........ . ..|..|...+..++|
T Consensus 88 hkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~ 167 (350)
T KOG0641|consen 88 HKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYI 167 (350)
T ss_pred cCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEE
Confidence 445689999999999999999999988875532211 0 112222222222222
Q ss_pred -----------------------CCCCCEEEEeeCCCcEEEEeCCCC---------------CcccEEEEEEcCCCCEEE
Q psy10953 62 -----------------------STDGHWIASGALDGIINIFDANTG---------------HSSWVLSTAFTRDGKFFI 103 (181)
Q Consensus 62 -----------------------s~d~~~l~~~~~d~~v~i~d~~~~---------------~~~~v~~~~~s~~~~~l~ 103 (181)
+=+|-++++|+.|.+|++||++.. +.+.|.+++..|.|++|+
T Consensus 168 tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~ 247 (350)
T KOG0641|consen 168 TDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLA 247 (350)
T ss_pred eecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceee
Confidence 224556788999999999998621 345789999999999999
Q ss_pred EEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 104 SASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 104 ~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
++-.|..+.+||++.+..+..+. |...|.++.|||...++.+++.|..|++-|++..
T Consensus 248 sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 248 SGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred eccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccc
Confidence 99999999999999998888775 8889999999999999999999999999998643
No 85
>KOG0264|consensus
Probab=99.82 E-value=4.6e-19 Score=134.43 Aligned_cols=154 Identities=23% Similarity=0.402 Sum_probs=125.3
Q ss_pred eeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcE-------EEEEecCCceEEEEEECCCC-CEEEEeeCCCc
Q psy10953 6 KINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETGKL-------EQIFDTRGKFTLSIAYSTDG-HWIASGALDGI 76 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~ 76 (181)
++..+...-++++|++.. ..|++++.|++|++||+..... ...+..|...+..++|++-. ..|++.+.|+.
T Consensus 172 ~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~ 251 (422)
T KOG0264|consen 172 RLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGK 251 (422)
T ss_pred EEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCe
Confidence 555666666789998754 4688999999999999974433 34566778888899999854 67788999999
Q ss_pred EEEEeCCC----------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCC-ceeeeee-cCCcEEEEEEccCCC-E
Q psy10953 77 INIFDANT----------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARR-ENMHTFK-HADQVWCVCVAPDGD-K 142 (181)
Q Consensus 77 v~i~d~~~----------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~-~~~~~~~-~~~~v~~~~~sp~g~-~ 142 (181)
+.+||+++ +|...+.+++|+|.+ ..||+++.|++|++||++.. ++++++. |.+.|..+.|||... .
T Consensus 252 L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv 331 (422)
T KOG0264|consen 252 LMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV 331 (422)
T ss_pred EEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence 99999984 366789999999965 58899999999999999974 4666665 888999999999865 4
Q ss_pred EEEEcCCCcEEEEeCCC
Q psy10953 143 FVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~ 159 (181)
|++++.|+++.+||+..
T Consensus 332 LASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 332 LASSGTDRRLNVWDLSR 348 (422)
T ss_pred eEecccCCcEEEEeccc
Confidence 67788899999999854
No 86
>KOG0274|consensus
Probab=99.82 E-value=1.3e-18 Score=139.97 Aligned_cols=150 Identities=18% Similarity=0.390 Sum_probs=133.5
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~- 84 (181)
.+..+...||.+++...+..+++|+.|.++++||..+|++...+..|...+.++.. ....+++|+.|.+|++|++.+
T Consensus 244 ~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~ 321 (537)
T KOG0274|consen 244 RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNG 321 (537)
T ss_pred eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCc
Confidence 37788999999999888899999999999999999999999999988887765554 556788899999999999873
Q ss_pred -------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 85 -------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 85 -------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+|...|.++.++ +..+++++.|++|++||..+++++.++. |...|+++.+.+. ..+++|+.|+.|++||
T Consensus 322 ~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWd 398 (537)
T KOG0274|consen 322 ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWD 398 (537)
T ss_pred ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeec
Confidence 488899999887 7899999999999999999999998886 8899999988665 8999999999999999
Q ss_pred CCCC
Q psy10953 157 YKPE 160 (181)
Q Consensus 157 ~~~~ 160 (181)
+...
T Consensus 399 l~~~ 402 (537)
T KOG0274|consen 399 LRTK 402 (537)
T ss_pred CCch
Confidence 9887
No 87
>KOG0281|consensus
Probab=99.82 E-value=1.2e-19 Score=134.57 Aligned_cols=154 Identities=23% Similarity=0.423 Sum_probs=127.3
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
....|+++.+ |...+++|..|.+|++||..+..+...+..|...+.|+.+ |.+.+++|++|.+|.+||.+++
T Consensus 196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cCCceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhh
Confidence 3455788777 6778999999999999999999988888888887877766 5679999999999999999875
Q ss_pred ----CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee---ee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 ----HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH---TF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 ----~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~---~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
|...|..+.|+. .++++++.|.++.+||+.....+. .+ .|...|+.+.|+ .++++++|.|++|++|++
T Consensus 272 tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~ 347 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWST 347 (499)
T ss_pred HHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEec
Confidence 556788888754 588999999999999998765332 12 477789988884 669999999999999999
Q ss_pred CCCeeEEEcCCCCc
Q psy10953 158 KPEEEVEVNGGGGE 171 (181)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (181)
.+++-++...|.+.
T Consensus 348 st~efvRtl~gHkR 361 (499)
T KOG0281|consen 348 STCEFVRTLNGHKR 361 (499)
T ss_pred cceeeehhhhcccc
Confidence 99998887777543
No 88
>KOG0294|consensus
Probab=99.82 E-value=1.3e-18 Score=127.24 Aligned_cols=154 Identities=22% Similarity=0.373 Sum_probs=127.1
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC--EEEEeeCCCcEEE
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH--WIASGALDGIINI 79 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~--~l~~~~~d~~v~i 79 (181)
+++...+.+...+.++|. ++.++|+|+.|.+|++||++..+.+..+..|...+.++.|.+.-. +|++|+.||.|.+
T Consensus 34 ~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i 111 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII 111 (362)
T ss_pred eccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence 356667777788888887 799999999999999999999988887777888888999988765 8999999999999
Q ss_pred EeCC--------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 80 FDAN--------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 80 ~d~~--------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
|+.. ++|...|+.++++|.|++.++.+.|+.++.||+=+++.-...........+.|+|.|.+|+.++.+ .
T Consensus 112 w~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~-~ 190 (362)
T KOG0294|consen 112 WRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN-K 190 (362)
T ss_pred EEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc-E
Confidence 9985 468888999999999999999999999999999777654444444445558888888888777654 6
Q ss_pred EEEEeCC
Q psy10953 152 VHMYSYK 158 (181)
Q Consensus 152 v~i~~~~ 158 (181)
|-+|.+.
T Consensus 191 i~i~q~d 197 (362)
T KOG0294|consen 191 IDIYQLD 197 (362)
T ss_pred EEEEecc
Confidence 7777764
No 89
>KOG0305|consensus
Probab=99.82 E-value=1.5e-18 Score=136.08 Aligned_cols=153 Identities=22% Similarity=0.354 Sum_probs=132.6
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
..++.++.|+++|++|++|..+|.|.+||....+....+.. |...+-+++|. +..+.+|+.|+.+..+|++.
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~ 294 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV 294 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence 67799999999999999999999999999998888877776 77777788997 67788999999999999863
Q ss_pred ----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccC-CCEEEEEc--CCCcEEEEe
Q psy10953 85 ----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPD-GDKFVSVG--EDKAVHMYS 156 (181)
Q Consensus 85 ----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~-g~~l~~~~--~d~~v~i~~ 156 (181)
+|...|..++|+++++++++|+.|..+.|||.........+ .|...|..++|+|- ...||+|+ .|+.|++|+
T Consensus 295 ~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn 374 (484)
T KOG0305|consen 295 STLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWN 374 (484)
T ss_pred hhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEE
Confidence 47788999999999999999999999999999776666665 48899999999994 55677766 589999999
Q ss_pred CCCCeeEEE
Q psy10953 157 YKPEEEVEV 165 (181)
Q Consensus 157 ~~~~~~~~~ 165 (181)
..++..+..
T Consensus 375 ~~~g~~i~~ 383 (484)
T KOG0305|consen 375 TNTGARIDS 383 (484)
T ss_pred cCCCcEecc
Confidence 988776643
No 90
>KOG1273|consensus
Probab=99.81 E-value=1.2e-18 Score=127.58 Aligned_cols=145 Identities=19% Similarity=0.344 Sum_probs=126.2
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH------- 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~------- 86 (181)
-.++.|++.|.+||+|+.||.|.+||+.|......+..|-..+.+++||+||+.|++++.|..+.+||+..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence 4689999999999999999999999999999888888898899999999999999999999999999986421
Q ss_pred ----------c--------------cc-----------------------EEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy10953 87 ----------S--------------SW-----------------------VLSTAFTRDGKFFISASADHTVRVWNFARR 119 (181)
Q Consensus 87 ----------~--------------~~-----------------------v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 119 (181)
. .. ..+..|++.|+++.+|...|.+.++|..+.
T Consensus 106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~ 185 (405)
T KOG1273|consen 106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL 185 (405)
T ss_pred cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence 0 00 011237888999999999999999999999
Q ss_pred ceeeeeec--CCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 120 ENMHTFKH--ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 120 ~~~~~~~~--~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+++..++- ...|-.+.++..|++|+..+.|+.|+.|++.
T Consensus 186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 88888763 3578899999999999999999999999985
No 91
>KOG0268|consensus
Probab=99.81 E-value=2.3e-19 Score=133.26 Aligned_cols=165 Identities=20% Similarity=0.325 Sum_probs=137.2
Q ss_pred ceeeeccCeeeEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKY-VLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+++.+.++...+.++.|+|.... |++++.|+.|.+||+++++.++.+...-. ...++|+|.+-.|++++.|..++.||
T Consensus 179 Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mR-TN~IswnPeafnF~~a~ED~nlY~~D 257 (433)
T KOG0268|consen 179 PVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMR-TNTICWNPEAFNFVAANEDHNLYTYD 257 (433)
T ss_pred ccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeecc-ccceecCccccceeeccccccceehh
Confidence 67788888888999999997664 56777999999999999988876654333 34789999888899999999999999
Q ss_pred CC---------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 82 AN---------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 82 ~~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
.+ .+|.+.|.++.|||.|+-+++|+.|.+|+||....+.....+. ....|.++.||-|.+++++||.|+
T Consensus 258 mR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~ 337 (433)
T KOG0268|consen 258 MRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDG 337 (433)
T ss_pred hhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCc
Confidence 75 4688899999999999999999999999999988765444332 345699999999999999999999
Q ss_pred cEEEEeCCCCeeEEEcCC
Q psy10953 151 AVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~~~ 168 (181)
.|++|.-...+.+.+...
T Consensus 338 nvRlWka~Aseklgv~t~ 355 (433)
T KOG0268|consen 338 NVRLWKAKASEKLGVITP 355 (433)
T ss_pred ceeeeecchhhhcCCCCh
Confidence 999999877666554433
No 92
>KOG1539|consensus
Probab=99.81 E-value=5.1e-18 Score=137.06 Aligned_cols=147 Identities=23% Similarity=0.440 Sum_probs=132.0
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE---ecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF---DTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
..+.+++.++.|+..+.|...|+|-+|++++|-....+ ..|...+.+++.+.-++.+++++.+|.+.+||..+
T Consensus 449 ~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~ 528 (910)
T KOG1539|consen 449 INATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK 528 (910)
T ss_pred cceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee
Confidence 45788999999999999999999999999999887777 35667788999888889999999999999998541
Q ss_pred ---------------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy10953 85 ---------------------------------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR 119 (181)
Q Consensus 85 ---------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 119 (181)
+|...++++.|||||++|++++.|++|++||+.++
T Consensus 529 ~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 529 KSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred eeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence 46778999999999999999999999999999999
Q ss_pred ceeeeeecCCcEEEEEEccCCCEEEEEcCC-CcEEEEeCC
Q psy10953 120 ENMHTFKHADQVWCVCVAPDGDKFVSVGED-KAVHMYSYK 158 (181)
Q Consensus 120 ~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~~v~i~~~~ 158 (181)
..+..+....+...+.|||+|.+|++...| +.|++|..+
T Consensus 609 ~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 609 TLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred ceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence 999888888889999999999999999988 789999964
No 93
>KOG1446|consensus
Probab=99.81 E-value=9.5e-18 Score=122.53 Aligned_cols=149 Identities=17% Similarity=0.316 Sum_probs=123.5
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC--CCcEEEEeCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL--DGIINIFDAN---- 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~--d~~v~i~d~~---- 83 (181)
....+.++.|+++|.++++++.|.++++||..+++....+..+..-+..++|-.....++.++. |.+|++.++.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNky 92 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKY 92 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCce
Confidence 3456789999999999999999999999999999999888766443444566555555555554 8899988875
Q ss_pred ----CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 84 ----TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 84 ----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.||...|+.+..+|-+..+++++.|++|++||++..+++..+...... .+||+|+|-.+|++...+.|++||++.
T Consensus 93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p-i~AfDp~GLifA~~~~~~~IkLyD~Rs 171 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP-IAAFDPEGLIFALANGSELIKLYDLRS 171 (311)
T ss_pred EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc-ceeECCCCcEEEEecCCCeEEEEEecc
Confidence 479999999999999999999999999999999988877776654433 579999999999999888999999864
No 94
>KOG0288|consensus
Probab=99.81 E-value=5.5e-19 Score=133.01 Aligned_cols=165 Identities=21% Similarity=0.296 Sum_probs=127.7
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC--
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA-- 82 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~-- 82 (181)
..+......+..++|.++++++++++.|+.+++|++...+....+..|.+-+.++.|......+++|+.|.+++.||+
T Consensus 213 ~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k 292 (459)
T KOG0288|consen 213 STLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQK 292 (459)
T ss_pred hhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhh
Confidence 345555566889999999999999999999999999999888777777766666666554444555666655555554
Q ss_pred -------------------------------------CCCC-------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy10953 83 -------------------------------------NTGH-------SSWVLSTAFTRDGKFFISASADHTVRVWNFAR 118 (181)
Q Consensus 83 -------------------------------------~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 118 (181)
+.++ .+.|.++..+++|..+++++.|.++.+.|+++
T Consensus 293 ~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt 372 (459)
T KOG0288|consen 293 AYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRT 372 (459)
T ss_pred hheeccccccccccceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeeccc
Confidence 3222 24678899999999999999999999999999
Q ss_pred Cceeeeeec-----CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 119 RENMHTFKH-----ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 119 ~~~~~~~~~-----~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
......+.. ....+.+.|||+++++++||.||.|+||+..++..-.+...+
T Consensus 373 ~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s 428 (459)
T KOG0288|consen 373 KEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLS 428 (459)
T ss_pred ccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccC
Confidence 887776642 234778999999999999999999999999887654444443
No 95
>KOG0646|consensus
Probab=99.81 E-value=1.8e-18 Score=131.86 Aligned_cols=149 Identities=18% Similarity=0.299 Sum_probs=133.7
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC------
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN------ 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~------ 83 (181)
-|..+.+++-+|+|.+|+.|+-.+.|++|.+.+|.++..+..|-..+.++.|+.||.+|++|+.||.|.+|++.
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~ 159 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD 159 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc
Confidence 35557899999999999999899999999999999998888787778899999999999999999999999863
Q ss_pred -----------CCCcccEEEEEEcCCC--CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 84 -----------TGHSSWVLSTAFTRDG--KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 84 -----------~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
..|...|+++...+.| -.++|++.|.++++||+..+..+.++..+..+.+++++|-++.+++|+++|
T Consensus 160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G 239 (476)
T KOG0646|consen 160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEG 239 (476)
T ss_pred cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcc
Confidence 2467788888877764 478999999999999999999999988888999999999999999999999
Q ss_pred cEEEEeCC
Q psy10953 151 AVHMYSYK 158 (181)
Q Consensus 151 ~v~i~~~~ 158 (181)
.|.+.++.
T Consensus 240 ~I~~~~~~ 247 (476)
T KOG0646|consen 240 KIFQNLLF 247 (476)
T ss_pred eEEeeehh
Confidence 99887764
No 96
>KOG0308|consensus
Probab=99.80 E-value=3.6e-19 Score=140.41 Aligned_cols=156 Identities=20% Similarity=0.417 Sum_probs=133.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEE-CCCCCEEEEeeCCCcEEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAY-STDGHWIASGALDGIINIF 80 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~-s~d~~~l~~~~~d~~v~i~ 80 (181)
+.+++.+..=+.+++...+|+.|++++.|-+|++|+...+. +...+..|.+.+.++++ .++...+|+|+-|+.|.+|
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflW 145 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLW 145 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEE
Confidence 34445555556678888899999999999999999987663 44566678888999998 8888899999999999999
Q ss_pred eCCC-------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCC
Q psy10953 81 DANT-------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDG 140 (181)
Q Consensus 81 d~~~-------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g 140 (181)
|++. ++...|++++.++.|..+++|+.++.+++||.++.+.+..+. |++.|..+.+++||
T Consensus 146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDG 225 (735)
T KOG0308|consen 146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDG 225 (735)
T ss_pred EccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCC
Confidence 9873 345578999999999999999999999999999987666554 99999999999999
Q ss_pred CEEEEEcCCCcEEEEeCCC
Q psy10953 141 DKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 141 ~~l~~~~~d~~v~i~~~~~ 159 (181)
+.++++|.|+.|++|++..
T Consensus 226 t~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 226 TRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred CeEeecCCCceEEeeeccc
Confidence 9999999999999999954
No 97
>KOG0772|consensus
Probab=99.80 E-value=5.5e-19 Score=136.38 Aligned_cols=156 Identities=23% Similarity=0.381 Sum_probs=120.0
Q ss_pred cCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-cEEEEEecC-----CceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 9 VGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETG-KLEQIFDTR-----GKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~-~~~~~~~~~-----~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
.+-..+.+-+|+|+.+ .+++++.|+++|+||+... +..+++... ...+..++|++||++|++|..||.|.+|+
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~ 345 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWD 345 (641)
T ss_pred CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeee
Confidence 4556678889999765 5789999999999999744 344555432 12345789999999999999999999999
Q ss_pred CC-----------CCCcc--cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc-eeeeee---cCCcEEEEEEccCCCEEE
Q psy10953 82 AN-----------TGHSS--WVLSTAFTRDGKFFISASADHTVRVWNFARRE-NMHTFK---HADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 82 ~~-----------~~~~~--~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~---~~~~v~~~~~sp~g~~l~ 144 (181)
.. ..|.. .|.++.||++|++|++-+.|+++++||++..+ ++.... ...+-+.++|||+.+.|+
T Consensus 346 ~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~ 425 (641)
T KOG0772|consen 346 KGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLIL 425 (641)
T ss_pred cCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEE
Confidence 64 24555 79999999999999999999999999999754 333322 333456899999999999
Q ss_pred EEcC------CCcEEEEeCCCCeeEE
Q psy10953 145 SVGE------DKAVHMYSYKPEEEVE 164 (181)
Q Consensus 145 ~~~~------d~~v~i~~~~~~~~~~ 164 (181)
+|.. .+.++.|+..+-+.+.
T Consensus 426 TGtS~~~~~~~g~L~f~d~~t~d~v~ 451 (641)
T KOG0772|consen 426 TGTSAPNGMTAGTLFFFDRMTLDTVY 451 (641)
T ss_pred ecccccCCCCCceEEEEeccceeeEE
Confidence 9873 3568888876655543
No 98
>KOG0269|consensus
Probab=99.80 E-value=2.9e-19 Score=143.17 Aligned_cols=145 Identities=18% Similarity=0.402 Sum_probs=120.2
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEeCCC---CcEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCCC-----
Q psy10953 16 NVVFSP-DDKYVLSGSQSGKINLYGVET---GKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFDANTG----- 85 (181)
Q Consensus 16 ~~~~s~-~g~~l~~~~~d~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~~----- 85 (181)
++.|+. +.++||+++..|.|.+||+.. .+++..|..|...+.++.|++-. .+|++|+.||.|+.||++..
T Consensus 92 DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t 171 (839)
T KOG0269|consen 92 DVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKST 171 (839)
T ss_pred hcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccc
Confidence 345543 567899999999999999975 56667787788888899998854 67889999999999999743
Q ss_pred ---CcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCc-eeeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 86 ---HSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRE-NMHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 86 ---~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~-~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
....|++++|+|. +..++++...|.+++||++... ....+ .|.++|.|+.++|++.+||+||.|+.|+||++..
T Consensus 172 ~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~ 251 (839)
T KOG0269|consen 172 FRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTD 251 (839)
T ss_pred ccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccC
Confidence 3346899999996 5688899999999999998754 33334 4899999999999999999999999999999964
Q ss_pred C
Q psy10953 160 E 160 (181)
Q Consensus 160 ~ 160 (181)
.
T Consensus 252 ~ 252 (839)
T KOG0269|consen 252 S 252 (839)
T ss_pred C
Confidence 3
No 99
>KOG0264|consensus
Probab=99.80 E-value=2.6e-18 Score=130.40 Aligned_cols=155 Identities=17% Similarity=0.293 Sum_probs=122.4
Q ss_pred eeeeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCC--CcEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVET--GKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINI 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i 79 (181)
...+..+...+-+++|+|- ...++++++|+.+.+||+++ .+.......|...+.|++|+|-+ ..||+|+.|++|.+
T Consensus 220 ~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~L 299 (422)
T KOG0264|consen 220 KTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVAL 299 (422)
T ss_pred eEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEE
Confidence 3445566777888999985 45667899999999999994 44445555677778899999954 66788999999999
Q ss_pred EeCCC---------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCc--------------eeeee-ecCCcEEEE
Q psy10953 80 FDANT---------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRE--------------NMHTF-KHADQVWCV 134 (181)
Q Consensus 80 ~d~~~---------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~--------------~~~~~-~~~~~v~~~ 134 (181)
||++. +|...|..+.|+|+.. .|++++.|+.+.+||+..-. .+... .|...|...
T Consensus 300 wDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~Df 379 (422)
T KOG0264|consen 300 WDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDF 379 (422)
T ss_pred eechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccc
Confidence 99973 6788899999999875 78889999999999986411 11111 367789999
Q ss_pred EEccCCCE-EEEEcCCCcEEEEeCC
Q psy10953 135 CVAPDGDK-FVSVGEDKAVHMYSYK 158 (181)
Q Consensus 135 ~~sp~g~~-l~~~~~d~~v~i~~~~ 158 (181)
.|+|+.-. |++++.|+.++||.+.
T Consensus 380 sWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 380 SWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred cCCCCCCeEEEEecCCceEEEeecc
Confidence 99998665 7778889999999985
No 100
>KOG2096|consensus
Probab=99.80 E-value=4.7e-18 Score=124.76 Aligned_cols=150 Identities=26% Similarity=0.446 Sum_probs=119.9
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC------
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN------ 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~------ 83 (181)
+..++.++-+..++.+|++++.|.+|.+|+++ |+.++.+..........+.||+|+.+++++..--|++|.+-
T Consensus 186 h~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~ 264 (420)
T KOG2096|consen 186 HQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGT 264 (420)
T ss_pred cccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcc
Confidence 44557778888899999999999999999999 88888887765555678899999999999999999999862
Q ss_pred ----------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-------------C---------------------
Q psy10953 84 ----------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR-------------R--------------------- 119 (181)
Q Consensus 84 ----------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-------------~--------------------- 119 (181)
+||...|..++|+++.+.+++.+.||++++||..- +
T Consensus 265 fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~ 344 (420)
T KOG2096|consen 265 FQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD 344 (420)
T ss_pred hhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc
Confidence 47888999999999999999999999999998520 0
Q ss_pred -------ceee-----------eee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 120 -------ENMH-----------TFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 120 -------~~~~-----------~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
..+. .+. |...|.+++|+|+|+++++++ |+.++++...+|.
T Consensus 345 ~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ntpg~ 405 (420)
T KOG2096|consen 345 SLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIRNTPGW 405 (420)
T ss_pred EEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeecCCCch
Confidence 0010 011 345688899999999988887 6778887765553
No 101
>KOG0278|consensus
Probab=99.80 E-value=7.2e-19 Score=125.27 Aligned_cols=152 Identities=23% Similarity=0.371 Sum_probs=132.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE-EEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKL-EQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH------ 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~------ 86 (181)
|..++|+.|.++|++|++++.+|+||++.-+- ...+..+...+..+.|....+.|++.+.|+.|++||.+++.
T Consensus 103 vk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~ 182 (334)
T KOG0278|consen 103 VKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE 182 (334)
T ss_pred eeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe
Confidence 57899999999999999999999999975443 24556677777888888888889999999999999998763
Q ss_pred -cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEE
Q psy10953 87 -SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEV 165 (181)
Q Consensus 87 -~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~ 165 (181)
...|.++-++++|+++. -...+.|++||..+...+..+.-+..|.+.+++|+..++++|+.|..++.||+.+++++..
T Consensus 183 ~~s~VtSlEvs~dG~ilT-ia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~ 261 (334)
T KOG0278|consen 183 FNSPVTSLEVSQDGRILT-IAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGS 261 (334)
T ss_pred cCCCCcceeeccCCCEEE-EecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeee
Confidence 45688899999999764 4556789999999999999998888999999999999999999999999999999999887
Q ss_pred c
Q psy10953 166 N 166 (181)
Q Consensus 166 ~ 166 (181)
.
T Consensus 262 ~ 262 (334)
T KOG0278|consen 262 Y 262 (334)
T ss_pred c
Confidence 4
No 102
>KOG1063|consensus
Probab=99.79 E-value=4e-18 Score=135.34 Aligned_cols=156 Identities=21% Similarity=0.354 Sum_probs=130.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSG-----KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v 77 (181)
+..++..+-.++++++.+|+|+++|+++... .|++|+..+....+.+..|.--+..++|||||++|++.+.|.++
T Consensus 517 Ev~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~ 596 (764)
T KOG1063|consen 517 EVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTV 596 (764)
T ss_pred hhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceE
Confidence 4457778888999999999999999998654 59999999888888787787778899999999999999999999
Q ss_pred EEEeCC------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC--ceeee---eecCCcEEEEEEccC-
Q psy10953 78 NIFDAN------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR--ENMHT---FKHADQVWCVCVAPD- 139 (181)
Q Consensus 78 ~i~d~~------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~--~~~~~---~~~~~~v~~~~~sp~- 139 (181)
.+|... +.|+..|.++.|+|++++++|++.|++|++|..... +.+.. .++...|+.+++.|-
T Consensus 597 sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~ 676 (764)
T KOG1063|consen 597 SLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVD 676 (764)
T ss_pred EeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccc
Confidence 999863 347778999999999999999999999999987765 33333 356778888887762
Q ss_pred ----CCEEEEEcCCCcEEEEeCC
Q psy10953 140 ----GDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 140 ----g~~l~~~~~d~~v~i~~~~ 158 (181)
+..+++|-+.|.|.+|+.+
T Consensus 677 ~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 677 HNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred cccccceEEEEecccEEEEEecc
Confidence 2256777788999999976
No 103
>KOG0294|consensus
Probab=99.79 E-value=2.4e-17 Score=120.63 Aligned_cols=158 Identities=15% Similarity=0.253 Sum_probs=127.5
Q ss_pred ceeeeccCeeeEEEEEEcCCCC--EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDK--YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~--~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
++..+-.+...+.++.|.++-. +|++|++||.|.+|+.....+...+..|...+..++.+|.+++.++.+.|+.+++|
T Consensus 75 qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~W 154 (362)
T KOG0294|consen 75 QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTW 154 (362)
T ss_pred hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeee
Confidence 5556666777889999998876 89999999999999999999999888888888999999999999999999999999
Q ss_pred eCCCCCcccE-------EEEEEcCC---------------------------------------CCEEEEEeCCCcEEEE
Q psy10953 81 DANTGHSSWV-------LSTAFTRD---------------------------------------GKFFISASADHTVRVW 114 (181)
Q Consensus 81 d~~~~~~~~v-------~~~~~s~~---------------------------------------~~~l~~~~~d~~i~v~ 114 (181)
|+..+....+ ..+.|+|. +..|++|..|+.|++|
T Consensus 155 NLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~ 234 (362)
T KOG0294|consen 155 NLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLK 234 (362)
T ss_pred hhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEe
Confidence 9865422111 11333333 3445678888899999
Q ss_pred ecCCCceeeeee-cCCcEEEEEE--ccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 115 NFARRENMHTFK-HADQVWCVCV--APDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 115 d~~~~~~~~~~~-~~~~v~~~~~--sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
|..+..+...+. |+.+|-++.+ .|++.+|+++|.||.|++|++...
T Consensus 235 D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 235 DTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 988877777775 8888888763 577889999999999999998765
No 104
>KOG4283|consensus
Probab=99.79 E-value=5.2e-18 Score=123.42 Aligned_cols=156 Identities=21% Similarity=0.322 Sum_probs=125.5
Q ss_pred ccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC---CEEEEeeCCCcEEEEeCC
Q psy10953 8 NVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG---HWIASGALDGIINIFDAN 83 (181)
Q Consensus 8 ~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~---~~l~~~~~d~~v~i~d~~ 83 (181)
..+...+..+.|-| |...+.+++.|+++++||+.+-+....|..++. +++-++||-. .++++|..+-.|++.|+.
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~-VYshamSp~a~sHcLiA~gtr~~~VrLCDi~ 176 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGK-VYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA 176 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCce-eehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence 34666678888888 555677899999999999999988887776555 5677777743 467778889999999997
Q ss_pred C--------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCC-ceee---------------eeecCCcEEEEEEcc
Q psy10953 84 T--------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARR-ENMH---------------TFKHADQVWCVCVAP 138 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~-~~~~---------------~~~~~~~v~~~~~sp 138 (181)
. +|...|.++.|+|..+ .|++++.||.|++||++.- .++. ...|.+.+.++||+.
T Consensus 177 SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tS 256 (397)
T KOG4283|consen 177 SGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTS 256 (397)
T ss_pred CCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecc
Confidence 4 5788899999999988 5789999999999999753 1111 112567899999999
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 139 DGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 139 ~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
+|+++++++.|.++++|+...|+...
T Consensus 257 d~~~l~~~gtd~r~r~wn~~~G~ntl 282 (397)
T KOG4283|consen 257 DARYLASCGTDDRIRVWNMESGRNTL 282 (397)
T ss_pred cchhhhhccCccceEEeecccCcccc
Confidence 99999999999999999998776543
No 105
>KOG0299|consensus
Probab=99.79 E-value=1e-17 Score=127.55 Aligned_cols=159 Identities=17% Similarity=0.307 Sum_probs=133.4
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
.+-..+.+++.|+||++|++|+.|..|.+|+.++.+.++.+..|...+.+++|-..-..+++++.|+.+++|++..
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v 279 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV 279 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH
Confidence 4556789999999999999999999999999999999988888888888999988778899999999999999863
Q ss_pred ----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 85 ----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 85 ----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+|...|.++.-..-++.+-+++.|+++++|.+.....+.-..+.+.+-|++|-.+ ..|++||.+|.|.+|++...
T Consensus 280 etlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KK 358 (479)
T KOG0299|consen 280 ETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKK 358 (479)
T ss_pred HHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeeccc
Confidence 6888888887777777777777999999999965544444456778989998755 57889999999999999888
Q ss_pred eeEEEcCC
Q psy10953 161 EEVEVNGG 168 (181)
Q Consensus 161 ~~~~~~~~ 168 (181)
.++-+..-
T Consensus 359 kplf~~~~ 366 (479)
T KOG0299|consen 359 KPLFTSRL 366 (479)
T ss_pred CceeEeec
Confidence 77654433
No 106
>KOG1036|consensus
Probab=99.79 E-value=2.1e-17 Score=120.49 Aligned_cols=146 Identities=28% Similarity=0.487 Sum_probs=124.7
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
++..++++.|+|.++.|++++.||++++||+....+...+. ++.++.+++|.+ ...+++|+-||.|+.+|+.++
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCccee
Confidence 45568999999999999999999999999999887777765 455577889987 456889999999999999864
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
|...+.++.+++-...+++|+-|++|++||.+.......+...+.|.++.. .|+.|++|+.+..|.+||++.
T Consensus 90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn 164 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRN 164 (323)
T ss_pred eccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEec--cCCEEEEeecCceEEEEEccc
Confidence 667899999999888899999999999999998666666666778988865 578899999999999999865
No 107
>KOG0308|consensus
Probab=99.78 E-value=8.9e-18 Score=132.62 Aligned_cols=156 Identities=26% Similarity=0.425 Sum_probs=135.2
Q ss_pred eeeeccCeeeEEEEEE-cCCCCEEEEEeCCCcEEEEeCCCC--cEEEEEe---------cCCceEEEEEECCCCCEEEEe
Q psy10953 4 ISKINVGPVDMWNVVF-SPDDKYVLSGSQSGKINLYGVETG--KLEQIFD---------TRGKFTLSIAYSTDGHWIASG 71 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~-s~~g~~l~~~~~d~~i~~~d~~~~--~~~~~~~---------~~~~~~~~~~~s~d~~~l~~~ 71 (181)
+..+..+.-+|.+++. .++..++|+|+.|+.|.+||+.++ ++...+. .+...+++++..+.|..+++|
T Consensus 110 ~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsG 189 (735)
T KOG0308|consen 110 MSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSG 189 (735)
T ss_pred HhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEec
Confidence 4456678888999999 888899999999999999999977 2222221 234567889999999899999
Q ss_pred eCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCE
Q psy10953 72 ALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDK 142 (181)
Q Consensus 72 ~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~ 142 (181)
+..+.+++||.++ +|+.-|..+-.++||+.+++++.||+|++||+..++++.++. |...||++..+|+=..
T Consensus 190 gtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~ 269 (735)
T KOG0308|consen 190 GTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTH 269 (735)
T ss_pred CcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcce
Confidence 9999999999874 678889999999999999999999999999999999999987 7778999999999999
Q ss_pred EEEEcCCCcEEEEeCCC
Q psy10953 143 FVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~ 159 (181)
+++|+.|+.|..=++..
T Consensus 270 vYsG~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 270 VYSGGRDGNIYRTDLRN 286 (735)
T ss_pred EEecCCCCcEEecccCC
Confidence 99999999999888866
No 108
>KOG0639|consensus
Probab=99.78 E-value=1.5e-18 Score=133.78 Aligned_cols=146 Identities=25% Similarity=0.405 Sum_probs=131.5
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------ 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------ 85 (181)
..++.++++||.+..++++.||.|.+||+.+..+++.|+.|.+-..|+.+++||..|-+|+-|++|+-||++.+
T Consensus 510 paCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqh 589 (705)
T KOG0639|consen 510 PACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQH 589 (705)
T ss_pred hhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhh
Confidence 45788999999999999999999999999999999999998887789999999999999999999999998631
Q ss_pred ------------------------------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee
Q psy10953 86 ------------------------------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH 123 (181)
Q Consensus 86 ------------------------------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 123 (181)
|.+.|.++.|.+.|+++++.+.|..+..|...-+..+.
T Consensus 590 dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiF 669 (705)
T KOG0639|consen 590 DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 669 (705)
T ss_pred hhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCcccccee
Confidence 33457889999999999999999999999888888887
Q ss_pred eeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 124 TFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 124 ~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+.+....|.++.+|-|.++|++|+.|+...+|.+
T Consensus 670 qskE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 670 QSKESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 8788889999999999999999999998888864
No 109
>KOG0274|consensus
Probab=99.78 E-value=1.7e-17 Score=133.45 Aligned_cols=159 Identities=18% Similarity=0.347 Sum_probs=132.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.++.+ .+.++++|+.|.+|++|++++++.+.++..|...|.++..+ +..+++|+.|++|.+||+.
T Consensus 284 ~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 284 THSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred EEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence 3344555565666555 55678889999999999999999999998788888888886 8889999999999999986
Q ss_pred --------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-ceeeeeec-CCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 84 --------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-ENMHTFKH-ADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 84 --------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~-~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
++|..+|.++.+.+. ..+++|+.|+.|++||+.+. +++..+.+ ..-+.++ ...++++++++.|+.|+
T Consensus 360 ~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l--~~~~~~Lvs~~aD~~Ik 436 (537)
T KOG0274|consen 360 TGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSL--LLRDNFLVSSSADGTIK 436 (537)
T ss_pred hceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccc--ccccceeEeccccccEE
Confidence 468899999987776 88999999999999999999 88888874 4445444 45788999999999999
Q ss_pred EEeCCCCeeEEEcCCC
Q psy10953 154 MYSYKPEEEVEVNGGG 169 (181)
Q Consensus 154 i~~~~~~~~~~~~~~~ 169 (181)
+||..+++.++...+.
T Consensus 437 ~WD~~~~~~~~~~~~~ 452 (537)
T KOG0274|consen 437 LWDAEEGECLRTLEGR 452 (537)
T ss_pred EeecccCceeeeeccC
Confidence 9999999888777663
No 110
>KOG2096|consensus
Probab=99.78 E-value=1.2e-17 Score=122.63 Aligned_cols=152 Identities=19% Similarity=0.304 Sum_probs=106.5
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEE--EEE--ecCCceEEEEEECCC------------------
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLE--QIF--DTRGKFTLSIAYSTD------------------ 64 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~--~~~--~~~~~~~~~~~~s~d------------------ 64 (181)
+-.+...+.+++||.||++|++++.|++|++|++++-... +.+ ..+-+....+.|+||
T Consensus 82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk 161 (420)
T KOG2096|consen 82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYK 161 (420)
T ss_pred hhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEE
Confidence 4456777999999999999999999999999998753211 000 000001112333333
Q ss_pred -------------------------------------CCEEEEeeCCCcEEEEeCCCCC-------cccEEEEEEcCCCC
Q psy10953 65 -------------------------------------GHWIASGALDGIINIFDANTGH-------SSWVLSTAFTRDGK 100 (181)
Q Consensus 65 -------------------------------------~~~l~~~~~d~~v~i~d~~~~~-------~~~v~~~~~s~~~~ 100 (181)
+++|.+++.|..|.+|+++..- ...-..++.||+|+
T Consensus 162 ~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~GR 241 (420)
T KOG2096|consen 162 LVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDGR 241 (420)
T ss_pred eeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCCc
Confidence 3455566666777777776321 12234578899999
Q ss_pred EEEEEeCCCcEEEEecC---CCc-----eeeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 101 FFISASADHTVRVWNFA---RRE-----NMHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 101 ~l~~~~~d~~i~v~d~~---~~~-----~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
++++++..-.+++|..- .+. ...++ .|...|..+||||+.+.+++.|.||.+++||.+
T Consensus 242 Fia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 242 FIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred EEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 99999999999999852 221 22233 378889999999999999999999999999974
No 111
>KOG0299|consensus
Probab=99.77 E-value=1.1e-17 Score=127.47 Aligned_cols=166 Identities=33% Similarity=0.468 Sum_probs=135.6
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEE-EEEe-----------------cCCceEEEEEECCCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLE-QIFD-----------------TRGKFTLSIAYSTDG 65 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~-~~~~-----------------~~~~~~~~~~~s~d~ 65 (181)
++.+-.+...+.+++++||+++.++++.|++|.=|++.+++.. ..+. .|...+.+++.|+||
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 4455667788899999999999999999999999999888743 1111 223456789999999
Q ss_pred CEEEEeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEE
Q psy10953 66 HWIASGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCV 136 (181)
Q Consensus 66 ~~l~~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~ 136 (181)
++|++|+.|..+.||+..+ +|...|.+++|-..-..+.+++.|..+++|++.....+.++ .|++.|.++..
T Consensus 215 kylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Ida 294 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDA 294 (479)
T ss_pred cEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeech
Confidence 9999999999999999863 67888999999888788899999999999999877655554 58999999988
Q ss_pred ccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCCC
Q psy10953 137 APDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGGG 170 (181)
Q Consensus 137 sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~ 170 (181)
..-++.+.+|+.|+++++|.+. .+...+..++.
T Consensus 295 L~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~ 327 (479)
T KOG0299|consen 295 LSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGE 327 (479)
T ss_pred hcccceEEeccccceeEEEecc-ccceeeeeCCC
Confidence 8888888888899999999994 44444555554
No 112
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.77 E-value=2.7e-16 Score=118.15 Aligned_cols=155 Identities=16% Similarity=0.222 Sum_probs=117.0
Q ss_pred EEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCCcc---
Q psy10953 14 MWNVVFSPDDKYVLSGSQSG-KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDGIINIFDANTGHSS--- 88 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~~~~~~--- 88 (181)
+..++|+|+|++++++..++ .+.+||.++++.......... ...+.|+|++++|+++ ..++.+++||+.++...
T Consensus 117 ~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~ 195 (300)
T TIGR03866 117 PEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQR-PRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKI 195 (300)
T ss_pred cceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCC-ccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeee
Confidence 56799999999999888765 467789988877654433223 3478999999988654 56899999999764210
Q ss_pred ------------cEEEEEEcCCCCEEEE-EeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc-CCCcEEE
Q psy10953 89 ------------WVLSTAFTRDGKFFIS-ASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG-EDKAVHM 154 (181)
Q Consensus 89 ------------~v~~~~~s~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~i 154 (181)
....+.|+|++++++. ...++.+.+||..+++......+...+++++|+|+|++|++++ .++.|.+
T Consensus 196 ~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v 275 (300)
T TIGR03866 196 TFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSV 275 (300)
T ss_pred eecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEE
Confidence 1235789999997544 3456689999998887766555566799999999999998865 5899999
Q ss_pred EeCCCCeeEEEcCCC
Q psy10953 155 YSYKPEEEVEVNGGG 169 (181)
Q Consensus 155 ~~~~~~~~~~~~~~~ 169 (181)
||+.+++.+.....+
T Consensus 276 ~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 276 IDVAALKVIKSIKVG 290 (300)
T ss_pred EECCCCcEEEEEEcc
Confidence 999998876544433
No 113
>KOG0288|consensus
Probab=99.77 E-value=2.3e-17 Score=124.33 Aligned_cols=140 Identities=21% Similarity=0.342 Sum_probs=118.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH------- 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~------- 86 (181)
+.+|..+ +..+++|..|++|++||.++..........+ .+.++..+++|..+.+.+.|.++.+.|+++..
T Consensus 305 cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA 381 (459)
T KOG0288|consen 305 CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSA 381 (459)
T ss_pred ccceEec--ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeec
Confidence 3444443 6678899999999999999999888887766 46799999999999999999999999997532
Q ss_pred -----cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCC-cEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 87 -----SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HAD-QVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~-~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
....+.+.|||++.|+++|+.||.|+||+..++++..... +.. .|++++|+|.|..+++++.++.+.+|.
T Consensus 382 ~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 382 EGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred cccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 1235678999999999999999999999999998776664 222 699999999999999999999999994
No 114
>KOG1407|consensus
Probab=99.77 E-value=4.8e-17 Score=116.47 Aligned_cols=140 Identities=16% Similarity=0.296 Sum_probs=123.6
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC------
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN------ 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~------ 83 (181)
.+..+..++|+-++..++..+.-|+|.+.....-+.++.+..|.....|+.|+|+|++|++|+.|..+.+||+.
T Consensus 146 ~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R 225 (313)
T KOG1407|consen 146 FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICER 225 (313)
T ss_pred ccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhe
Confidence 44456778899888888877778999999988778888888887777799999999999999999999999985
Q ss_pred --CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC
Q psy10953 84 --TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 84 --~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
+.+.-+|+.+.||.+|++|++++.|..|-|=+..++..+..+++.++-..++|+|....|+-++.|
T Consensus 226 ~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 226 CISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred eeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecC
Confidence 345567999999999999999999999999999999999999999999999999999888877754
No 115
>KOG0300|consensus
Probab=99.77 E-value=2.3e-17 Score=121.28 Aligned_cols=157 Identities=17% Similarity=0.289 Sum_probs=138.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++..++.+..-+.++.|-..|+.+++++.|.+..+||++++..++.+..|.....-++-+|..+++++.+.|.+.++||.
T Consensus 264 Pl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDF 343 (481)
T KOG0300|consen 264 PLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDF 343 (481)
T ss_pred eeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccc
Confidence 57788888888999999999999999999999999999999999999888776666777899999999999999999997
Q ss_pred C---------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-ceeeeeecCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 83 N---------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-ENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 83 ~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
+ .||...|+++.|..+.+ +++++.|.+|++||+++- .++.++....+++.++++..+..|+.--.++.|
T Consensus 344 ReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqv 422 (481)
T KOG0300|consen 344 REAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQV 422 (481)
T ss_pred hhhcceeeeecccccceeEEEEecCCc-eeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceE
Confidence 6 47888999999988755 679999999999999874 567778877889999999988889988888999
Q ss_pred EEEeCCCC
Q psy10953 153 HMYSYKPE 160 (181)
Q Consensus 153 ~i~~~~~~ 160 (181)
++||+...
T Consensus 423 RlfDlnG~ 430 (481)
T KOG0300|consen 423 RLFDLNGN 430 (481)
T ss_pred EEEecCCC
Confidence 99999643
No 116
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.76 E-value=4.2e-16 Score=111.04 Aligned_cols=148 Identities=18% Similarity=0.387 Sum_probs=108.6
Q ss_pred EEEEEEcCCCCEEEEEeC---C-------CcEEEEeC--CCCcEEEEEec-CCceEEEEEECCCCCEEEE--eeCCCcEE
Q psy10953 14 MWNVVFSPDDKYVLSGSQ---S-------GKINLYGV--ETGKLEQIFDT-RGKFTLSIAYSTDGHWIAS--GALDGIIN 78 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~---d-------~~i~~~d~--~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~--~~~d~~v~ 78 (181)
-..+.|+|+|.+|+.-.. | +...+|.+ .... ...+.. ....+.+++|+|+|+.|++ |..++.+.
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~-~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ 86 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIP-VESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVT 86 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCc-cceeeccCCCceEEEEECcCCCEEEEEEccCCcccE
Confidence 356889999998864333 1 23445544 3333 333332 2334789999999998765 44677999
Q ss_pred EEeCCCC-----CcccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC--
Q psy10953 79 IFDANTG-----HSSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE-- 148 (181)
Q Consensus 79 i~d~~~~-----~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-- 148 (181)
+||++.. ....++.+.|+|+|+++++++.+ |.+.+||..+.+.+....+.. +..++|||||++++++..
T Consensus 87 lyd~~~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~ 165 (194)
T PF08662_consen 87 LYDVKGKKIFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYLATATTSP 165 (194)
T ss_pred EEcCcccEeEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEEEEEEecc
Confidence 9998632 24467789999999999998754 679999999888888877764 679999999999998774
Q ss_pred ----CCcEEEEeCCCCeeEE
Q psy10953 149 ----DKAVHMYSYKPEEEVE 164 (181)
Q Consensus 149 ----d~~v~i~~~~~~~~~~ 164 (181)
|+.++||++. |..+.
T Consensus 166 r~~~dng~~Iw~~~-G~~l~ 184 (194)
T PF08662_consen 166 RLRVDNGFKIWSFQ-GRLLY 184 (194)
T ss_pred ceeccccEEEEEec-CeEeE
Confidence 7889999995 55543
No 117
>KOG2055|consensus
Probab=99.76 E-value=5.4e-17 Score=123.85 Aligned_cols=147 Identities=22% Similarity=0.408 Sum_probs=123.7
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCce-EEEEEECCCCCEEEEeeCCCcEEEEeCCCCC----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKF-TLSIAYSTDGHWIASGALDGIINIFDANTGH---- 86 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~---- 86 (181)
..+.++.|+.|++.|++++.+|.|.+||++...+++.+...+.. -.+++.|++|.+||+|+..|.|-|||.++..
T Consensus 345 G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~ 424 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTN 424 (514)
T ss_pred cEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCC
Confidence 34789999999999999999999999999999999888765542 3467889999999999999999999975421
Q ss_pred ----------cccEEEEEEcCCCCEEEEEeC--CCcEEEEecCCCceeeeeec----CCcEEEEEEccCCCEEEEEcCCC
Q psy10953 87 ----------SSWVLSTAFTRDGKFFISASA--DHTVRVWNFARRENMHTFKH----ADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 87 ----------~~~v~~~~~s~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~----~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
...|..++|+|+++.|+.++. ...+++.-+.+...+..++. -+.++|++|||.+.+++.|-..+
T Consensus 425 PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~g 504 (514)
T KOG2055|consen 425 PKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAG 504 (514)
T ss_pred CCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCC
Confidence 235889999999999887774 56789888887776666652 34699999999999999999999
Q ss_pred cEEEEeCC
Q psy10953 151 AVHMYSYK 158 (181)
Q Consensus 151 ~v~i~~~~ 158 (181)
++.+|.+.
T Consensus 505 rv~l~kL~ 512 (514)
T KOG2055|consen 505 RVHLFKLH 512 (514)
T ss_pred ceeeEeec
Confidence 99999875
No 118
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.76 E-value=7.1e-16 Score=115.86 Aligned_cols=150 Identities=15% Similarity=0.186 Sum_probs=115.9
Q ss_pred EEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCC-----
Q psy10953 14 MWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDGIINIFDANTGH----- 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~~~~----- 86 (181)
+..++|+|+|+.+ ++++.++.|++||..+++....+..+.. ...+.++|+++.++++ ..++.+++||+.+..
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~ 111 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEI 111 (300)
T ss_pred CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe
Confidence 5679999999987 5667889999999999888776654333 3468899999977654 568999999997532
Q ss_pred --cccEEEEEEcCCCCEEEEEeCCC-cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc-CCCcEEEEeCCCCee
Q psy10953 87 --SSWVLSTAFTRDGKFFISASADH-TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG-EDKAVHMYSYKPEEE 162 (181)
Q Consensus 87 --~~~v~~~~~s~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~~~~~~ 162 (181)
...+..++|+|+|++++++..++ .+.+||..+++..........+.+++|+|+|+.+++++ .++.|++|++.+++.
T Consensus 112 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~ 191 (300)
T TIGR03866 112 PVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV 191 (300)
T ss_pred eCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee
Confidence 22357789999999998888765 46788988877665554445567899999999886555 589999999988765
Q ss_pred EE
Q psy10953 163 VE 164 (181)
Q Consensus 163 ~~ 164 (181)
+.
T Consensus 192 ~~ 193 (300)
T TIGR03866 192 IK 193 (300)
T ss_pred ee
Confidence 43
No 119
>KOG0301|consensus
Probab=99.75 E-value=6.4e-17 Score=128.57 Aligned_cols=147 Identities=24% Similarity=0.473 Sum_probs=119.8
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN-- 83 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~-- 83 (181)
.++.++..||.+++-|++ .++||+.|++|++|.- ++.++.|..|.+.++.+++-+++. |++++.||.|+.|++.
T Consensus 135 ~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~~ge 210 (745)
T KOG0301|consen 135 SLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDLDGE 210 (745)
T ss_pred ccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEeccCc
Confidence 467788889999888888 6779999999999963 777888888888888888876644 8889999999999984
Q ss_pred -----CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCC-cEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 84 -----TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHAD-QVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 84 -----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
-+|.+.+.++...++++.+++++.|+++++|+-. .+...+.++. .+|++.+-++|. +++|+.||.|++|..
T Consensus 211 ~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~ 287 (745)
T KOG0301|consen 211 VLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTV 287 (745)
T ss_pred eeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEe
Confidence 3688888888888888899999999999999865 5666677665 799988888875 455777999999987
Q ss_pred CC
Q psy10953 158 KP 159 (181)
Q Consensus 158 ~~ 159 (181)
..
T Consensus 288 ~k 289 (745)
T KOG0301|consen 288 DK 289 (745)
T ss_pred cc
Confidence 53
No 120
>KOG1332|consensus
Probab=99.75 E-value=3.6e-17 Score=116.15 Aligned_cols=149 Identities=23% Similarity=0.323 Sum_probs=120.4
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---EEEEEecCCceEEEEEECC--CCCEEEEeeCCCcEEEEeCCC--
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK---LEQIFDTRGKFTLSIAYST--DGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
.-+.++.+..-|++|||++.|++|++|.++.+. ++..+..|..++..+.|.. -|..|++++.||.|.+|.-..
T Consensus 12 D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~ 91 (299)
T KOG1332|consen 12 DMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR 91 (299)
T ss_pred hhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCc
Confidence 334566667789999999999999999997554 4456667777788888855 799999999999999998754
Q ss_pred --------CCcccEEEEEEcCCC--CEEEEEeCCCcEEEEecCCC-c-eeee--eecCCcEEEEEEccC---C-------
Q psy10953 85 --------GHSSWVLSTAFTRDG--KFFISASADHTVRVWNFARR-E-NMHT--FKHADQVWCVCVAPD---G------- 140 (181)
Q Consensus 85 --------~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~-~-~~~~--~~~~~~v~~~~~sp~---g------- 140 (181)
.|...|++++|-|.+ -.|++++.||+|.+.+++.. . .... .-|+-.++++++.|- |
T Consensus 92 w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~ 171 (299)
T KOG1332|consen 92 WTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGP 171 (299)
T ss_pred hhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCc
Confidence 477889999999984 58999999999999998764 1 1122 237778999999886 5
Q ss_pred ----CEEEEEcCCCcEEEEeCCCC
Q psy10953 141 ----DKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 141 ----~~l~~~~~d~~v~i~~~~~~ 160 (181)
++|++|+.|+.|+||....+
T Consensus 172 ~~~~krlvSgGcDn~VkiW~~~~~ 195 (299)
T KOG1332|consen 172 AAKVKRLVSGGCDNLVKIWKFDSD 195 (299)
T ss_pred ccccceeeccCCccceeeeecCCc
Confidence 67999999999999999764
No 121
>KOG0313|consensus
Probab=99.75 E-value=7.1e-17 Score=120.64 Aligned_cols=156 Identities=19% Similarity=0.323 Sum_probs=127.5
Q ss_pred eeeeccCeeeEEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCcEE----EEEecCCceEEEEEECCCCCEEEEeeCCCc
Q psy10953 4 ISKINVGPVDMWNVVFSPD---DKYVLSGSQSGKINLYGVETGKLE----QIFDTRGKFTLSIAYSTDGHWIASGALDGI 76 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~---g~~l~~~~~d~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~ 76 (181)
+..+..+...+.+++|--. ...+++++.|.++++|..+.+... ..-..|...+.+++..++|..+++|+.|.+
T Consensus 137 ~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~ 216 (423)
T KOG0313|consen 137 IKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTM 216 (423)
T ss_pred EEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccce
Confidence 4444555555666666432 235999999999999988766543 222357777889999999999999999999
Q ss_pred EEEEeCC---------------------------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee
Q psy10953 77 INIFDAN---------------------------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH 123 (181)
Q Consensus 77 v~i~d~~---------------------------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 123 (181)
+.+|+.. .+|...|.++.|++ ...+.+++.|++|+.||+.++....
T Consensus 217 lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~ 295 (423)
T KOG0313|consen 217 LKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKS 295 (423)
T ss_pred eeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeeccccee
Confidence 9999831 14777899999998 6778899999999999999999888
Q ss_pred eeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 124 TFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 124 ~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
++.-...+.++..+|..++|++|+.|..+++||-+.+
T Consensus 296 ~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~ 332 (423)
T KOG0313|consen 296 TLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG 332 (423)
T ss_pred eeecCcceeEeecccccceeeecCCCCceeecCCCCC
Confidence 8877788999999999999999999999999998765
No 122
>KOG0646|consensus
Probab=99.75 E-value=9.2e-17 Score=122.61 Aligned_cols=156 Identities=15% Similarity=0.252 Sum_probs=124.9
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCcEEEEEecCCceEEEEEECCC--CCEEEEeeCCCc
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE---------TGKLEQIFDTRGKFTLSIAYSTD--GHWIASGALDGI 76 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~---------~~~~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~ 76 (181)
..+=..+.++.|+-||.++++|+.||.|.+|.+. +-+....|..|.-.+.++...+- ..++++++.|.+
T Consensus 120 ~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t 199 (476)
T KOG0646|consen 120 SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRT 199 (476)
T ss_pred HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCce
Confidence 3445568999999999999999999999999762 22445677777777777776654 367999999999
Q ss_pred EEEEeCCCCC-------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc----------------eeeee-ecCC--c
Q psy10953 77 INIFDANTGH-------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRE----------------NMHTF-KHAD--Q 130 (181)
Q Consensus 77 v~i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~----------------~~~~~-~~~~--~ 130 (181)
+++||+..+. ...+.+++++|.++.+..|+.+|.|.+.++.... .+..+ .|.+ .
T Consensus 200 ~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ 279 (476)
T KOG0646|consen 200 IKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESA 279 (476)
T ss_pred EEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcc
Confidence 9999998763 4567899999999999999999999999875322 11112 2555 8
Q ss_pred EEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 131 VWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 131 v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
|+|++++-||..|++|+.||.|++|++...+-+
T Consensus 280 ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~i 312 (476)
T KOG0646|consen 280 ITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCI 312 (476)
T ss_pred eeEEEEecCccEEEeeCCCCCEEEEecchHHHH
Confidence 999999999999999999999999998765443
No 123
>KOG1332|consensus
Probab=99.75 E-value=3.1e-17 Score=116.50 Aligned_cols=157 Identities=22% Similarity=0.371 Sum_probs=128.1
Q ss_pred cceeeeccCeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCcEEE--EEecCCceEEEEEECCC--CCEEEEeeCCC
Q psy10953 2 KQISKINVGPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGKLEQ--IFDTRGKFTLSIAYSTD--GHWIASGALDG 75 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~d--~~~l~~~~~d~ 75 (181)
+.|..+..+..++|.++|.. -|.+||+++.||+|.+|.-.+++..+ .+..|...+.+++|.|. |-.|++++.||
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG 126 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDG 126 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCC
Confidence 35778888999999999986 89999999999999999988886543 33446666778888886 56889999999
Q ss_pred cEEEEeCCC-----------CCcccEEEEEEcCC---C-----------CEEEEEeCCCcEEEEecCCCc--eeeee-ec
Q psy10953 76 IINIFDANT-----------GHSSWVLSTAFTRD---G-----------KFFISASADHTVRVWNFARRE--NMHTF-KH 127 (181)
Q Consensus 76 ~v~i~d~~~-----------~~~~~v~~~~~s~~---~-----------~~l~~~~~d~~i~v~d~~~~~--~~~~~-~~ 127 (181)
.|.+.+.+. .|.-.|+++.|.|. | +.|++++.|..|+||....+. .-+++ .|
T Consensus 127 ~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H 206 (299)
T KOG1332|consen 127 KVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGH 206 (299)
T ss_pred cEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhc
Confidence 999998753 36667889999986 4 569999999999999988753 22223 38
Q ss_pred CCcEEEEEEccCC----CEEEEEcCCCcEEEEeCC
Q psy10953 128 ADQVWCVCVAPDG----DKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 128 ~~~v~~~~~sp~g----~~l~~~~~d~~v~i~~~~ 158 (181)
.+-|+.+++.|.- ..|+++|.|+.|.||...
T Consensus 207 ~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 207 KDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred chhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 8889999999864 479999999999999975
No 124
>KOG0270|consensus
Probab=99.75 E-value=1.4e-16 Score=121.09 Aligned_cols=147 Identities=20% Similarity=0.344 Sum_probs=122.2
Q ss_pred EEEEcCC-CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCCCC-C------
Q psy10953 16 NVVFSPD-DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDANTG-H------ 86 (181)
Q Consensus 16 ~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~~~-~------ 86 (181)
.++|.-+ .+.||+|+.|.+|++||+.+++....+.+++..+.++.|+|. ...|++|+.|++|.+.|.+.. +
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk 327 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK 327 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE
Confidence 4455433 456899999999999999999999999988888999999996 578899999999999999842 1
Q ss_pred -cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCC-ceeeeee-cCCcEEEEEEccCC-CEEEEEcCCCcEEEEeCCCCe
Q psy10953 87 -SSWVLSTAFTRDGK-FFISASADHTVRVWNFARR-ENMHTFK-HADQVWCVCVAPDG-DKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 87 -~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~-~~~~~~~-~~~~v~~~~~sp~g-~~l~~~~~d~~v~i~~~~~~~ 161 (181)
.+.|-.++|.|... .++++..||+++-+|+|.. +++.+.+ |.++|.++++++.- .++++++.|+.|++|++....
T Consensus 328 ~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 328 FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCC
Confidence 34578899999875 6778889999999999975 7777776 88899999998764 468889999999999986543
Q ss_pred e
Q psy10953 162 E 162 (181)
Q Consensus 162 ~ 162 (181)
+
T Consensus 408 ~ 408 (463)
T KOG0270|consen 408 P 408 (463)
T ss_pred C
Confidence 3
No 125
>KOG0301|consensus
Probab=99.74 E-value=1.4e-16 Score=126.69 Aligned_cols=151 Identities=19% Similarity=0.385 Sum_probs=127.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++..+-.++..|.+++...++. +++|+.|.++++|.. +++...++.|...+..+..-|++ .+++|+.|++|++|.-
T Consensus 93 P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~ 168 (745)
T KOG0301|consen 93 PLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG 168 (745)
T ss_pred chhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC
Confidence 5666777888899999888888 899999999999965 45555677888888888888877 7999999999999986
Q ss_pred C------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 83 N------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 83 ~------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
. .+|...|+.+++-+++. +++|+.||.|+.|++..........|+.-++++...++++.++++++|+++++|+
T Consensus 169 ~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~ 247 (745)
T KOG0301|consen 169 GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWK 247 (745)
T ss_pred CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEee
Confidence 4 47999999999988765 5689999999999995444444445889999999888899999999999999999
Q ss_pred CC
Q psy10953 157 YK 158 (181)
Q Consensus 157 ~~ 158 (181)
..
T Consensus 248 ~~ 249 (745)
T KOG0301|consen 248 KD 249 (745)
T ss_pred cC
Confidence 75
No 126
>KOG2055|consensus
Probab=99.74 E-value=1.6e-16 Score=121.31 Aligned_cols=157 Identities=20% Similarity=0.375 Sum_probs=133.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecC---CceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTR---GKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
.|+.+......+.++.|+|+|. .+++++....++.||+.+.++.++-... ......+..|++++.|+..+..|.|.
T Consensus 249 ~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~ 328 (514)
T KOG2055|consen 249 KLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIH 328 (514)
T ss_pred hheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEE
Confidence 4677888888889999999999 8899999999999999999876554322 23445678899999999999999999
Q ss_pred EEeCCCCC-------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcE--EEEEEccCCCEEEEEcCC
Q psy10953 79 IFDANTGH-------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQV--WCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 79 i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v--~~~~~sp~g~~l~~~~~d 149 (181)
+....++. .+.|..+.|+.+++.|+.++.+|.|++||++...+++.+...+.+ +++|.|++|++||+|+..
T Consensus 329 lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~ 408 (514)
T KOG2055|consen 329 LLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDS 408 (514)
T ss_pred eehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCc
Confidence 99877643 456888999999999999999999999999999999888766655 468899999999999999
Q ss_pred CcEEEEeCCC
Q psy10953 150 KAVHMYSYKP 159 (181)
Q Consensus 150 ~~v~i~~~~~ 159 (181)
|-|.||+.++
T Consensus 409 GiVNIYd~~s 418 (514)
T KOG2055|consen 409 GIVNIYDGNS 418 (514)
T ss_pred ceEEEeccch
Confidence 9999999643
No 127
>KOG0771|consensus
Probab=99.73 E-value=1.4e-16 Score=120.29 Aligned_cols=144 Identities=21% Similarity=0.270 Sum_probs=121.9
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC--------
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH-------- 86 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~-------- 86 (181)
..++|+++|..+++++.||++|+|+...-..+.....+...+.++.|||||+.|++.+.| ...+|+.++++
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 578999999999999999999999977666655555566668899999999999999999 89999975320
Q ss_pred ------------------------------------------------------cccEEEEEEcCCCCEEEEEeCCCcEE
Q psy10953 87 ------------------------------------------------------SSWVLSTAFTRDGKFFISASADHTVR 112 (181)
Q Consensus 87 ------------------------------------------------------~~~v~~~~~s~~~~~l~~~~~d~~i~ 112 (181)
...|.+++.+++|++++.|+.||.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 11466789999999999999999999
Q ss_pred EEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 113 VWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 113 v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+++..+-+.+.-.+ |..-|+.+.|+||.+++++.+.+.+..+..+..
T Consensus 307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 99998877666554 777899999999999999999999988877644
No 128
>KOG4328|consensus
Probab=99.73 E-value=7.6e-17 Score=122.93 Aligned_cols=154 Identities=21% Similarity=0.343 Sum_probs=126.4
Q ss_pred eeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 4 ISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
+...+.+...|.++.|+| +-..+++++.||+|+.-|++.+....++.. ......++.|+.+...++.+..-|...+|
T Consensus 227 v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~i 306 (498)
T KOG4328|consen 227 VYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVI 306 (498)
T ss_pred eEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEE
Confidence 345566777899999998 556788999999999999998877665554 33345577888888878888877799999
Q ss_pred eCCCC---------CcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCC---c--eeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 81 DANTG---------HSSWVLSTAFTRDG-KFFISASADHTVRVWNFARR---E--NMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 81 d~~~~---------~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~---~--~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
|++++ |...|..++++|-. .+++|++.|++++|||++.- . .+.++.|...|.++.|||++-.|++
T Consensus 307 D~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~T 386 (498)
T KOG4328|consen 307 DLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLT 386 (498)
T ss_pred EeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEe
Confidence 99854 45679999999965 58999999999999999852 2 2556678889999999999988999
Q ss_pred EcCCCcEEEEeC
Q psy10953 146 VGEDKAVHMYSY 157 (181)
Q Consensus 146 ~~~d~~v~i~~~ 157 (181)
.+.|+.|+||+-
T Consensus 387 T~~D~~IRv~ds 398 (498)
T KOG4328|consen 387 TCQDNEIRVFDS 398 (498)
T ss_pred eccCCceEEeec
Confidence 999999999998
No 129
>KOG0300|consensus
Probab=99.73 E-value=2.7e-17 Score=120.97 Aligned_cols=153 Identities=17% Similarity=0.328 Sum_probs=134.5
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC---
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN--- 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~--- 83 (181)
+..+...+|.++-......+.+++.|.+.++|.+++++++..+..|...+.++.|++.+.++++++.|++.+||...
T Consensus 144 ~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~ 223 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNW 223 (481)
T ss_pred hcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcC
Confidence 34566778999988888888999999999999999999999999998888999999999999999999999999621
Q ss_pred ---------------------------------------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy10953 84 ---------------------------------------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR 118 (181)
Q Consensus 84 ---------------------------------------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 118 (181)
++|...|.+..|...|+.+++++-|.+..+||..+
T Consensus 224 ~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt 303 (481)
T KOG0300|consen 224 EVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVET 303 (481)
T ss_pred cCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeecc
Confidence 12334566777888899999999999999999999
Q ss_pred Cceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 119 RENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 119 ~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+..+..+. |..+.+.++-+|..+.+++.+.|.+.++||+..
T Consensus 304 ge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe 345 (481)
T KOG0300|consen 304 GEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE 345 (481)
T ss_pred CceeccccCcchhccccccCCcceEEEEeccCceeEeccchh
Confidence 99888775 778899999999999999999999999999974
No 130
>KOG2048|consensus
Probab=99.73 E-value=5.2e-16 Score=123.09 Aligned_cols=158 Identities=25% Similarity=0.446 Sum_probs=132.7
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE--EEecCCceEEEEEECCCCCEEEEeeCCCcEEE
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ--IFDTRGKFTLSIAYSTDGHWIASGALDGIINI 79 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i 79 (181)
+++..+......+|+++.+|.+..++.|++||.+..++...+++.. .+......+.+++|+|++..++.|+.||.|++
T Consensus 101 k~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iri 180 (691)
T KOG2048|consen 101 KQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRI 180 (691)
T ss_pred ceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEE
Confidence 5667777788889999999999999999999988889888887763 34445566889999999999999999999999
Q ss_pred EeCCCCCcc----------------cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCE
Q psy10953 80 FDANTGHSS----------------WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDK 142 (181)
Q Consensus 80 ~d~~~~~~~----------------~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~ 142 (181)
||+.+++.. -|.++.|-.+ ..+++|...|+|.+||...+..+..+. |...|.+++..+++.+
T Consensus 181 wd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~ 259 (691)
T KOG2048|consen 181 WDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDR 259 (691)
T ss_pred EEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCe
Confidence 999765432 2456666654 457899999999999999998887776 7788999999999999
Q ss_pred EEEEcCCCcEEEEeCCCC
Q psy10953 143 FVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~~ 160 (181)
+++++.|+.|..|...+.
T Consensus 260 vfsaGvd~~ii~~~~~~~ 277 (691)
T KOG2048|consen 260 VFSAGVDPKIIQYSLTTN 277 (691)
T ss_pred EEEccCCCceEEEEecCC
Confidence 999999999988887654
No 131
>KOG0267|consensus
Probab=99.72 E-value=1.8e-17 Score=132.27 Aligned_cols=155 Identities=23% Similarity=0.423 Sum_probs=132.2
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
.+...+.++.+-..++.+++|+.|..+.+|.+..-..+..+..|...+.++.|+++..+|++|+.+|+|++||+..
T Consensus 26 ~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~v 105 (825)
T KOG0267|consen 26 AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIV 105 (825)
T ss_pred hhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhh
Confidence 3444556666666778899999999999998765555555667888899999999999999999999999999973
Q ss_pred ----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 85 ----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 85 ----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+|...+..+.|+|-+.+.+.++.|..+++||.+...+.+.+. |...+..++|+|+|++++.+++|+.+++||...
T Consensus 106 rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a 185 (825)
T KOG0267|consen 106 RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA 185 (825)
T ss_pred hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccc
Confidence 667778899999999999999999999999999877887776 777789999999999999999999999999976
Q ss_pred CeeE
Q psy10953 160 EEEV 163 (181)
Q Consensus 160 ~~~~ 163 (181)
|..+
T Consensus 186 gk~~ 189 (825)
T KOG0267|consen 186 GKLS 189 (825)
T ss_pred cccc
Confidence 6554
No 132
>KOG0647|consensus
Probab=99.72 E-value=5.3e-16 Score=113.11 Aligned_cols=151 Identities=17% Similarity=0.258 Sum_probs=117.5
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC--EEEEeeCCCcEEEEeCCCCC
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH--WIASGALDGIINIFDANTGH 86 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~--~l~~~~~d~~v~i~d~~~~~ 86 (181)
.....+.+++|+.||..+++|+-|+.+++||+.+++..++ ..|...+..+.|-+... .|++|+.|++++.||.+...
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v-~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQV-AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeee-eecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 3556689999999999999999999999999999976554 55666677888876554 78999999999999976310
Q ss_pred -------------------------------------------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy10953 87 -------------------------------------------------SSWVLSTAFTRDGKFFISASADHTVRVWNFA 117 (181)
Q Consensus 87 -------------------------------------------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 117 (181)
+-.+++++..++.+..+-|+.+|.+.+..+.
T Consensus 149 pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id 228 (347)
T KOG0647|consen 149 PVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYID 228 (347)
T ss_pred eeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecC
Confidence 1135677878887777888888988888877
Q ss_pred CCce--eeeee-cC---------CcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 118 RREN--MHTFK-HA---------DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 118 ~~~~--~~~~~-~~---------~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.+.. -.+++ |. -.|++++|+|.-..|++++.||.+..||-+..
T Consensus 229 ~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar 283 (347)
T KOG0647|consen 229 DPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDAR 283 (347)
T ss_pred CCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhh
Confidence 6522 22222 22 14778999999999999999999999996543
No 133
>KOG0641|consensus
Probab=99.72 E-value=1.4e-15 Score=107.41 Aligned_cols=138 Identities=19% Similarity=0.307 Sum_probs=117.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-------CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------C
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDT-------RGKFTLSIAYSTDGHWIASGALDGIINIFDANT--------G 85 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-------~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------~ 85 (181)
=+|-.+++|++|++|++||++-...+..+.. +...+..++..|.|++|++|..|....+||++. .
T Consensus 192 wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~p 271 (350)
T KOG0641|consen 192 WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHP 271 (350)
T ss_pred ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCC
Confidence 3778899999999999999998877766543 124567899999999999999999999999975 3
Q ss_pred CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-----ceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 86 HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-----ENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 86 ~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
|...|.++.|+|...++++++.|-.|++=|+... ..+..-.|.+.+..+.|+|+.--|++.+.|+++.+|.+.
T Consensus 272 hsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 272 HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred CccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 6778999999999999999999999999998642 123333588888899999999889999999999999875
No 134
>KOG0303|consensus
Probab=99.72 E-value=2.3e-16 Score=118.57 Aligned_cols=152 Identities=18% Similarity=0.285 Sum_probs=121.1
Q ss_pred eccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcE-------EEEEecCCceEEEEEECCCC-CEEEEeeCCCcE
Q psy10953 7 INVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKL-------EQIFDTRGKFTLSIAYSTDG-HWIASGALDGII 77 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v 77 (181)
+..+...+.+++|+| +.+.+|+|+.|.+|++|.+..+.+ ...+..|...+-.+.|+|-. +.|++++.|+.|
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence 345677789999998 666789999999999999976543 33455667767678999964 678899999999
Q ss_pred EEEeCCCC-------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCC-cEEEEEEccCCCEEEEEc-
Q psy10953 78 NIFDANTG-------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HAD-QVWCVCVAPDGDKFVSVG- 147 (181)
Q Consensus 78 ~i~d~~~~-------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~-~v~~~~~sp~g~~l~~~~- 147 (181)
.+|++.++ |...|.++.|+.+|.++++.+.|+.|+|||.++++.+..-. |.+ ....+.|-.+|..+-+|-
T Consensus 157 ~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfs 236 (472)
T KOG0303|consen 157 SIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFS 236 (472)
T ss_pred EEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccc
Confidence 99999765 57789999999999999999999999999999999887763 543 345566777888444443
Q ss_pred --CCCcEEEEeCC
Q psy10953 148 --EDKAVHMYSYK 158 (181)
Q Consensus 148 --~d~~v~i~~~~ 158 (181)
.++.+.+|+-.
T Consensus 237 r~seRq~aLwdp~ 249 (472)
T KOG0303|consen 237 RMSERQIALWDPN 249 (472)
T ss_pred cccccceeccCcc
Confidence 46789999864
No 135
>KOG0321|consensus
Probab=99.71 E-value=4.9e-16 Score=122.71 Aligned_cols=153 Identities=18% Similarity=0.285 Sum_probs=117.5
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEE--EecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQI--FDTRGKFTLSIAYSTDG-HWIASGALDGIINIFDAN 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~ 83 (181)
-..+-.-++++.|-|....|++++.|.++++||+++.++... +..|...+.+++|.|.. ..|++|+.||.+.+||.+
T Consensus 96 ~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R 175 (720)
T KOG0321|consen 96 PLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR 175 (720)
T ss_pred cccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence 344555689999999888899999999999999999998765 66677778899999965 678899999999999974
Q ss_pred C------------------C-----------------CcccEEE---EEEcCCCCEEEEEeC-CCcEEEEecCCCceeee
Q psy10953 84 T------------------G-----------------HSSWVLS---TAFTRDGKFFISASA-DHTVRVWNFARRENMHT 124 (181)
Q Consensus 84 ~------------------~-----------------~~~~v~~---~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~ 124 (181)
- + +...|.. +-+..|..+|++++. |+.|+|||++.......
T Consensus 176 ~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r 255 (720)
T KOG0321|consen 176 CNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYR 255 (720)
T ss_pred ccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccc
Confidence 1 0 1122333 456678888998887 99999999986432211
Q ss_pred --------ee-c---CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 125 --------FK-H---ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 125 --------~~-~---~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+. + .-.+.++.....|.++++.+.|+.|+.|++..
T Consensus 256 ~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s 302 (720)
T KOG0321|consen 256 QEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRS 302 (720)
T ss_pred cCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccc
Confidence 11 1 12467888888899988888899999999854
No 136
>KOG1408|consensus
Probab=99.69 E-value=8.1e-16 Score=123.22 Aligned_cols=158 Identities=20% Similarity=0.390 Sum_probs=133.7
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC---CCEEEEeeCCCcEEEEeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD---GHWIASGALDGIINIFDAN 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d---~~~l~~~~~d~~v~i~d~~ 83 (181)
.-.+...++++++||+|++||+|.--|++++|++..-........|...+.|+.+|.- .++|++++.|..|++||+.
T Consensus 455 ~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~ 534 (1080)
T KOG1408|consen 455 TCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK 534 (1080)
T ss_pred hcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecc
Confidence 3446677899999999999999999999999999887777777788888889999863 4788999999999999964
Q ss_pred C---------CC-------------------------------------------------cccEEEEEEcCCCCEEEEE
Q psy10953 84 T---------GH-------------------------------------------------SSWVLSTAFTRDGKFFISA 105 (181)
Q Consensus 84 ~---------~~-------------------------------------------------~~~v~~~~~s~~~~~l~~~ 105 (181)
. +| +..+.+++..|..++++++
T Consensus 535 rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~ 614 (1080)
T KOG1408|consen 535 RNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTV 614 (1080)
T ss_pred cccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEE
Confidence 1 11 1235678889999999999
Q ss_pred eCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 106 SADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 106 ~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
+.|.+|+|||+..++....|+ |.+...-+.+.|.|-++++.+.|+++.++|+.+++-+.
T Consensus 615 cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 615 CQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred ecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhh
Confidence 999999999999998888775 45667788899999999999999999999998887654
No 137
>KOG1036|consensus
Probab=99.69 E-value=3.4e-15 Score=109.06 Aligned_cols=157 Identities=18% Similarity=0.252 Sum_probs=120.7
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.++..++....+++|+.|++|++||.+.......+.... -+.++.. .|..|+.|..|..|.+||+++
T Consensus 88 ~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k-kVy~~~v--~g~~LvVg~~~r~v~iyDLRn 164 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK-KVYCMDV--SGNRLVVGTSDRKVLIYDLRN 164 (323)
T ss_pred eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc-eEEEEec--cCCEEEEeecCceEEEEEccc
Confidence 3456677789999999988999999999999999998755444444333 4555544 578899999999999999974
Q ss_pred C----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC----ceeeeee-cC---------CcEEEEEEccCC
Q psy10953 85 G----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR----ENMHTFK-HA---------DQVWCVCVAPDG 140 (181)
Q Consensus 85 ~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~-~~---------~~v~~~~~sp~g 140 (181)
- -+..++++++-|++.-+++++-||.|.+=.+... +.-..++ |. -+|++++|+|--
T Consensus 165 ~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~ 244 (323)
T KOG1036|consen 165 LDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH 244 (323)
T ss_pred ccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecccc
Confidence 2 2346899999999998999999999987665543 1111222 21 268999999999
Q ss_pred CEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 141 DKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 141 ~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
+.|++|+.||.|.+|+.....++.
T Consensus 245 ~tfaTgGsDG~V~~Wd~~~rKrl~ 268 (323)
T KOG1036|consen 245 GTFATGGSDGIVNIWDLFNRKRLK 268 (323)
T ss_pred ceEEecCCCceEEEccCcchhhhh
Confidence 999999999999999997765543
No 138
>KOG1009|consensus
Probab=99.69 E-value=4.5e-16 Score=117.21 Aligned_cols=153 Identities=20% Similarity=0.341 Sum_probs=127.9
Q ss_pred CeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCc---------EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEE
Q psy10953 10 GPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGK---------LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINI 79 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~---------~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i 79 (181)
+...++.+.|.++.. .+++|+.|..|++|-+..+. ....+..|...+..+.|+|+|..|++|+.+|.+.+
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 555678999998877 99999999999999774321 22345567778889999999999999999999999
Q ss_pred EeCC--------C----------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEE
Q psy10953 80 FDAN--------T----------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCV 134 (181)
Q Consensus 80 ~d~~--------~----------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~ 134 (181)
|-.. + +|...+..++|+|+++++++++.|..+++||+..+....... |...+..+
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgv 171 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGV 171 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccccccee
Confidence 9754 1 244567789999999999999999999999999998887775 77889999
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 135 CVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
++.|-++++++-+.|+..+.+.+...+.
T Consensus 172 awDpl~qyv~s~s~dr~~~~~~~~~~~~ 199 (434)
T KOG1009|consen 172 AWDPLNQYVASKSSDRHPEGFSAKLKQV 199 (434)
T ss_pred ecchhhhhhhhhccCcccceeeeeeeee
Confidence 9999999999999998777777765543
No 139
>KOG4283|consensus
Probab=99.69 E-value=1.6e-15 Score=110.66 Aligned_cols=147 Identities=20% Similarity=0.300 Sum_probs=114.2
Q ss_pred eEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEE---EE-------E--e---cCCceEEEEEECC-CCCEEEEeeCCC
Q psy10953 13 DMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLE---QI-------F--D---TRGKFTLSIAYST-DGHWIASGALDG 75 (181)
Q Consensus 13 ~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~---~~-------~--~---~~~~~~~~~~~s~-d~~~l~~~~~d~ 75 (181)
.+..+.+.+ .|+++++|+.||.|.+||++..... .. + + .|...+.++.|-| |.-.|.+++.|.
T Consensus 45 svNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDh 124 (397)
T KOG4283|consen 45 SVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDH 124 (397)
T ss_pred ccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccc
Confidence 355666665 6889999999999999999754310 00 0 1 1233455677776 566788899999
Q ss_pred cEEEEeCCCC-------CcccEEEEEEcCC---CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCE-E
Q psy10953 76 IINIFDANTG-------HSSWVLSTAFTRD---GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDK-F 143 (181)
Q Consensus 76 ~v~i~d~~~~-------~~~~v~~~~~s~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~-l 143 (181)
.+++||..+- ....|..-++||= ..++++|..+-.|++.|++.+...+++. |.+.|..+.|+|..++ |
T Consensus 125 tlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vL 204 (397)
T KOG4283|consen 125 TLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVL 204 (397)
T ss_pred eEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEE
Confidence 9999998753 3456777788884 3477888889999999999999888886 9999999999999887 6
Q ss_pred EEEcCCCcEEEEeCCC
Q psy10953 144 VSVGEDKAVHMYSYKP 159 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~ 159 (181)
++|+.|+.|++||++.
T Consensus 205 atgsaDg~irlWDiRr 220 (397)
T KOG4283|consen 205 ATGSADGAIRLWDIRR 220 (397)
T ss_pred EecCCCceEEEEEeec
Confidence 8888999999999864
No 140
>KOG1538|consensus
Probab=99.69 E-value=3.1e-16 Score=124.83 Aligned_cols=157 Identities=19% Similarity=0.359 Sum_probs=131.5
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC------CC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT------GH 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~------~~ 86 (181)
-+.+++|.|||..|+.+. +..+.+||...|.+.+.+..|.+-+++++|+.||+.+++|+.|+.|.+|...- .|
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH 92 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSH 92 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeecc
Confidence 468999999999998776 45899999999999999999999999999999999999999999999998652 47
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 87 SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 87 ~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
...|.++.|+|-.+.|++++-. ..-+|..... .+...+...++.+++|..||++++.|-.+|+|.+-+-..++.+++.
T Consensus 93 ~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK-~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~ 170 (1081)
T KOG1538|consen 93 NDAIQCMSFNPITHQLASCSLS-DFGLWSPEQK-SVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIE 170 (1081)
T ss_pred CCeeeEeecCchHHHhhhcchh-hccccChhhh-hHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEe
Confidence 8889999999999999988854 4567765443 3334445567899999999999999999999999877666677787
Q ss_pred CCCCcc
Q psy10953 167 GGGGEE 172 (181)
Q Consensus 167 ~~~~~~ 172 (181)
++|+.+
T Consensus 171 Rpgg~N 176 (1081)
T KOG1538|consen 171 RPGGSN 176 (1081)
T ss_pred CCCCCC
Confidence 776544
No 141
>KOG2110|consensus
Probab=99.66 E-value=2.6e-14 Score=106.74 Aligned_cols=145 Identities=19% Similarity=0.354 Sum_probs=115.1
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC---CceEEEEEECCCCCEEEEee--CCCcEEEEeCCC--
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR---GKFTLSIAYSTDGHWIASGA--LDGIINIFDANT-- 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~s~d~~~l~~~~--~d~~v~i~d~~~-- 84 (181)
..+.++.+ +-++|++.-.+ .|.+||+++-++++.+... ...+..+++++.+.+++.-+ ..|.|.+||+.+
T Consensus 88 t~IL~Vrm--Nr~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~ 164 (391)
T KOG2110|consen 88 TSILAVRM--NRKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ 164 (391)
T ss_pred CceEEEEE--ccceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce
Confidence 33445555 55677666555 4999999999988776643 22244556666677898743 358999999863
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCc-EEEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHT-VRVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.|.+.+.+++|+++|.+|||++..|+ |+||...+++.+.++. ....|++++|+|++++|++.|..++|++
T Consensus 165 ~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHi 244 (391)
T KOG2110|consen 165 PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHI 244 (391)
T ss_pred eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEE
Confidence 58899999999999999999998886 7899999999988886 3456899999999999999999999999
Q ss_pred EeCCC
Q psy10953 155 YSYKP 159 (181)
Q Consensus 155 ~~~~~ 159 (181)
|.+..
T Consensus 245 FKL~~ 249 (391)
T KOG2110|consen 245 FKLEK 249 (391)
T ss_pred EEecc
Confidence 99864
No 142
>KOG4378|consensus
Probab=99.65 E-value=1.1e-14 Score=112.64 Aligned_cols=156 Identities=15% Similarity=0.277 Sum_probs=132.7
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEE-EEeeCCCcEEEEeC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWI-ASGALDGIINIFDA 82 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l-~~~~~d~~v~i~d~ 82 (181)
..+..+...|.++.+.-...+||+++..|.|.+..+.++.....|... +..+.-+.++|..+.+ .+++.+|.|.+||.
T Consensus 115 r~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv 194 (673)
T KOG4378|consen 115 RFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDV 194 (673)
T ss_pred hhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEec
Confidence 345567777899999999999999999999999999998877777654 5556578999987765 56899999999998
Q ss_pred CC---------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 83 NT---------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 83 ~~---------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
.. .|..+...+.|+|.. .+|++.+.|+.|.+||.+.......+....+...++|+++|.+|++|...|.|
T Consensus 195 ~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~ 274 (673)
T KOG4378|consen 195 QGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGEL 274 (673)
T ss_pred cCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceE
Confidence 63 366677889999976 48899999999999999988878777777889999999999999999999999
Q ss_pred EEEeCCCC
Q psy10953 153 HMYSYKPE 160 (181)
Q Consensus 153 ~i~~~~~~ 160 (181)
.-||++..
T Consensus 275 i~YD~R~~ 282 (673)
T KOG4378|consen 275 IAYDMRST 282 (673)
T ss_pred EEEecccC
Confidence 99999653
No 143
>KOG1445|consensus
Probab=99.65 E-value=9e-16 Score=121.67 Aligned_cols=146 Identities=25% Similarity=0.401 Sum_probs=114.4
Q ss_pred eEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcE-------EEEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCC
Q psy10953 13 DMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKL-------EQIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDAN 83 (181)
Q Consensus 13 ~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~ 83 (181)
.+.++.|.| |..+||.+++||.|++|.+..+.+ ...+..|+.-++++.|+|- ...|+++++|.+|.+||+.
T Consensus 629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~ 708 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA 708 (1012)
T ss_pred eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence 378899998 778899999999999999876533 3456667777889999994 4678899999999999996
Q ss_pred C--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee-eeee--cCCcEEEEEEccCCCEEEEEcCC---
Q psy10953 84 T--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM-HTFK--HADQVWCVCVAPDGDKFVSVGED--- 149 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~--~~~~v~~~~~sp~g~~l~~~~~d--- 149 (181)
. +|...|..++|||+|+.+++.+.||++++|+.+.+... ..-+ ...+--.+.|--+|+++++.+-|
T Consensus 709 ~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~S 788 (1012)
T KOG1445|consen 709 NAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSS 788 (1012)
T ss_pred hhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccc
Confidence 3 68899999999999999999999999999998876432 2211 11222335556689998887744
Q ss_pred -CcEEEEeCC
Q psy10953 150 -KAVHMYSYK 158 (181)
Q Consensus 150 -~~v~i~~~~ 158 (181)
+.|.+|+..
T Consensus 789 eRQv~~Y~Aq 798 (1012)
T KOG1445|consen 789 ERQVQMYDAQ 798 (1012)
T ss_pred hhhhhhhhhh
Confidence 567787753
No 144
>KOG0268|consensus
Probab=99.64 E-value=3.2e-15 Score=111.43 Aligned_cols=156 Identities=15% Similarity=0.239 Sum_probs=116.7
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---------------------------cEEEEE------
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG---------------------------KLEQIF------ 49 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~---------------------------~~~~~~------ 49 (181)
++..+..+..-|..|+++. ..++++++|++|+.|.+... +.+.++
T Consensus 101 ~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~ 178 (433)
T KOG0268|consen 101 CIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDN 178 (433)
T ss_pred hhheeecccCceeeEEecc--cceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCC
Confidence 4667777888888888875 66788889998888874321 111111
Q ss_pred -----ecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCC-------cccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy10953 50 -----DTRGKFTLSIAYSTDG-HWIASGALDGIINIFDANTGH-------SSWVLSTAFTRDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 50 -----~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 116 (181)
....+.+.++.|+|-. ..|++++.|+.+.+||++.+. ....+.++|+|.+--+++++.|..++.||+
T Consensus 179 Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~Dm 258 (433)
T KOG0268|consen 179 PVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDM 258 (433)
T ss_pred ccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhh
Confidence 1111233466777754 456778899999999998653 234678899998878889999999999999
Q ss_pred CCCc-eeeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 117 ARRE-NMHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 117 ~~~~-~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+... ++..+ .|...|.++.|||.|+-|++||.|++|+||....+
T Consensus 259 R~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~ 304 (433)
T KOG0268|consen 259 RNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHG 304 (433)
T ss_pred hhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCC
Confidence 8754 33333 37889999999999999999999999999998654
No 145
>KOG1273|consensus
Probab=99.64 E-value=2.3e-14 Score=105.44 Aligned_cols=165 Identities=18% Similarity=0.284 Sum_probs=122.9
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-----------------------eE--------
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-----------------------FT-------- 56 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----------------------~~-------- 56 (181)
..+--.+.+++||+||+.|++++.|-.|.+||+..|..++.+..... .+
T Consensus 62 saH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h 141 (405)
T KOG1273|consen 62 SAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH 141 (405)
T ss_pred hccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCce
Confidence 44566689999999999999999999999999998876554432110 00
Q ss_pred ---------------EEEEECCCCCEEEEeeCCCcEEEEeCCCCC---------cccEEEEEEcCCCCEEEEEeCCCcEE
Q psy10953 57 ---------------LSIAYSTDGHWIASGALDGIINIFDANTGH---------SSWVLSTAFTRDGKFFISASADHTVR 112 (181)
Q Consensus 57 ---------------~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~---------~~~v~~~~~s~~~~~l~~~~~d~~i~ 112 (181)
.+..|.+.|+++++|..-|.+.+||..+-+ ...|..+-++..|+.|+..+.|..|+
T Consensus 142 ~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR 221 (405)
T KOG1273|consen 142 SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIR 221 (405)
T ss_pred eeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEE
Confidence 012255678899999999999999987532 13466778999999999999999999
Q ss_pred EEecCCC-------cee--eeee---cCCcEEEEEEccCCCEEEEEcC-CCcEEEEeCCCCeeEEEcCCCCcc
Q psy10953 113 VWNFARR-------ENM--HTFK---HADQVWCVCVAPDGDKFVSVGE-DKAVHMYSYKPEEEVEVNGGGGEE 172 (181)
Q Consensus 113 v~d~~~~-------~~~--~~~~---~~~~v~~~~~sp~g~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~ 172 (181)
.|++..- +.. +.++ ....-.+++||.+|.++++++. ...++||.-..|..++++.|.++|
T Consensus 222 ~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE 294 (405)
T KOG1273|consen 222 TYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGE 294 (405)
T ss_pred EEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchh
Confidence 9997631 111 1111 1223457999999999988885 468999999999999999886543
No 146
>KOG1007|consensus
Probab=99.64 E-value=2.3e-14 Score=104.30 Aligned_cols=144 Identities=22% Similarity=0.358 Sum_probs=111.0
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE-EEEEecC-----CceEEEEEECC--CCCEEEEeeCCCcEEEEeCCC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL-EQIFDTR-----GKFTLSIAYST--DGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~-----~~~~~~~~~s~--d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+.++.|.|++..+++-. |..|.+|+++.+.. ...+... .....+-+|+| ||..+++. .|+++..||+++
T Consensus 125 ~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT 202 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRT 202 (370)
T ss_pred ceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccc
Confidence 578999999999998876 88999999986655 2322211 11223567887 77777654 488999999975
Q ss_pred C---------CcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCc-eeeeee-cCCcEEEEEEccCC-CEEEEEcCCCc
Q psy10953 85 G---------HSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRE-NMHTFK-HADQVWCVCVAPDG-DKFVSVGEDKA 151 (181)
Q Consensus 85 ~---------~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~-~~~~~~-~~~~v~~~~~sp~g-~~l~~~~~d~~ 151 (181)
. |...|+.+.|+|+-+ +|++|+.|+.|++||.+..+ ++.+.+ |...||+++|+|.- +.+.++|.|..
T Consensus 203 ~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~ 282 (370)
T KOG1007|consen 203 MKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSA 282 (370)
T ss_pred hhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCce
Confidence 3 455689999999976 78899999999999998754 444444 77789999999964 56788889999
Q ss_pred EEEEeCC
Q psy10953 152 VHMYSYK 158 (181)
Q Consensus 152 v~i~~~~ 158 (181)
|.+|...
T Consensus 283 V~Lsca~ 289 (370)
T KOG1007|consen 283 VNLSCAS 289 (370)
T ss_pred eEEEecc
Confidence 9999864
No 147
>KOG0302|consensus
Probab=99.64 E-value=6.9e-15 Score=110.16 Aligned_cols=138 Identities=17% Similarity=0.304 Sum_probs=108.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCC----------------cEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCC
Q psy10953 22 DDKYVLSGSQSGKINLYGVETG----------------KLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFDANT 84 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~----------------~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~ 84 (181)
+..+.++=+..|.|++|++..- +.+..+..|+..-+.++|||-- ..|++|..-+.+++|...+
T Consensus 164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~ 243 (440)
T KOG0302|consen 164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST 243 (440)
T ss_pred CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence 4445666677899999987432 1233444455556789999932 2378899999999997643
Q ss_pred -----------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCC---ceeeeeecCCcEEEEEEccCCCEEEEEcCC
Q psy10953 85 -----------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARR---ENMHTFKHADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 85 -----------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
+|+..|-.++|||..+ .|++|+.|++|+|||++.+ ..+..-.|...|+.+.|+.+..+|++|+.|
T Consensus 244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~Dd 323 (440)
T KOG0302|consen 244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDD 323 (440)
T ss_pred CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCC
Confidence 5888899999999865 8899999999999999987 345554588899999999988899999999
Q ss_pred CcEEEEeCCC
Q psy10953 150 KAVHMYSYKP 159 (181)
Q Consensus 150 ~~v~i~~~~~ 159 (181)
|.++|||++.
T Consensus 324 Gt~~iwDLR~ 333 (440)
T KOG0302|consen 324 GTLSIWDLRQ 333 (440)
T ss_pred ceEEEEEhhh
Confidence 9999999864
No 148
>KOG2394|consensus
Probab=99.64 E-value=1.2e-15 Score=118.59 Aligned_cols=94 Identities=29% Similarity=0.610 Sum_probs=79.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+..+.+..+..+..++|||||++||+.++||.+|+||..+.+++..... .+. ..|++|||||+++++|+.|..|.+|.
T Consensus 282 Pv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGG-LLCvcWSPDGKyIvtGGEDDLVtVwS 360 (636)
T KOG2394|consen 282 PVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGG-LLCVCWSPDGKYIVTGGEDDLVTVWS 360 (636)
T ss_pred ccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccc-eEEEEEcCCccEEEecCCcceEEEEE
Confidence 3455666666778899999999999999999999999988877654433 244 46999999999999999999999998
Q ss_pred CC--------CCCcccEEEEEEcC
Q psy10953 82 AN--------TGHSSWVLSTAFTR 97 (181)
Q Consensus 82 ~~--------~~~~~~v~~~~~s~ 97 (181)
.. .+|++||..++|+|
T Consensus 361 f~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 361 FEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred eccceEEEeccccccceeeEeecc
Confidence 75 47999999999998
No 149
>KOG2048|consensus
Probab=99.63 E-value=1.2e-13 Score=109.90 Aligned_cols=155 Identities=14% Similarity=0.253 Sum_probs=126.7
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE-EEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ-IFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH 86 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~-~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~ 86 (181)
.-|..+.++|++.+.+.||.+=.||.|.+|++..+-+.. .+.. ....+.+++|++ +..|.+.+.+|.|.-||+.+..
T Consensus 23 ~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk 101 (691)
T KOG2048|consen 23 YKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLK 101 (691)
T ss_pred eeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCc
Confidence 356678899999999999999999999999998765543 3332 345678899995 5558888889999999997643
Q ss_pred --------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee--e-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 87 --------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF--K-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 87 --------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
.+.|.+++.+|.+..++.++.||.++.++...+...... . -.+++.++.|+|++..++.|+.|+.|++|
T Consensus 102 ~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriw 181 (691)
T KOG2048|consen 102 QKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIW 181 (691)
T ss_pred eeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEE
Confidence 356889999999999999999997777777766654432 2 34789999999999999999999999999
Q ss_pred eCCCCeeEE
Q psy10953 156 SYKPEEEVE 164 (181)
Q Consensus 156 ~~~~~~~~~ 164 (181)
|...++.+.
T Consensus 182 d~~~~~t~~ 190 (691)
T KOG2048|consen 182 DVKSGQTLH 190 (691)
T ss_pred EcCCCceEE
Confidence 999988776
No 150
>KOG2445|consensus
Probab=99.63 E-value=1.6e-13 Score=100.61 Aligned_cols=149 Identities=19% Similarity=0.384 Sum_probs=112.4
Q ss_pred ccCeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC-------cE--EEEEecCCceEEEEEECCC--CCEEEEeeCC
Q psy10953 8 NVGPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETG-------KL--EQIFDTRGKFTLSIAYSTD--GHWIASGALD 74 (181)
Q Consensus 8 ~~~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~-------~~--~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d 74 (181)
..+...++-+.|.+ -|+.+|+++.|+++.+|.-... +- ...+......+.+++|.|. |-.+++++.|
T Consensus 56 rah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aD 135 (361)
T KOG2445|consen 56 RAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASAD 135 (361)
T ss_pred EecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccC
Confidence 34566678888864 6899999999999999975211 11 1222233445778999885 6789999999
Q ss_pred CcEEEEeCCC----------------------------------------------------------------------
Q psy10953 75 GIINIFDANT---------------------------------------------------------------------- 84 (181)
Q Consensus 75 ~~v~i~d~~~---------------------------------------------------------------------- 84 (181)
|.+++|++..
T Consensus 136 G~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~k 215 (361)
T KOG2445|consen 136 GILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLK 215 (361)
T ss_pred cEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeee
Confidence 9999997420
Q ss_pred -----CCcccEEEEEEcCC-C---CEEEEEeCCCcEEEEecCCC--------------------ceeeeee-cCCcEEEE
Q psy10953 85 -----GHSSWVLSTAFTRD-G---KFFISASADHTVRVWNFARR--------------------ENMHTFK-HADQVWCV 134 (181)
Q Consensus 85 -----~~~~~v~~~~~s~~-~---~~l~~~~~d~~i~v~d~~~~--------------------~~~~~~~-~~~~v~~~ 134 (181)
+|...|++++|.|+ | .+|++++.|| |+||.++.. +.+..+. |.++||.+
T Consensus 216 va~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv 294 (361)
T KOG2445|consen 216 VAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRV 294 (361)
T ss_pred ehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEE
Confidence 13456889999996 3 5789999999 999998621 1222233 77899999
Q ss_pred EEccCCCEEEEEcCCCcEEEEeC
Q psy10953 135 CVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+|.-.|..|++.|.||.|++|..
T Consensus 295 ~wNmtGtiLsStGdDG~VRLWka 317 (361)
T KOG2445|consen 295 RWNMTGTILSSTGDDGCVRLWKA 317 (361)
T ss_pred EEeeeeeEEeecCCCceeeehhh
Confidence 99999999999999999999985
No 151
>KOG0642|consensus
Probab=99.63 E-value=2e-14 Score=112.22 Aligned_cols=160 Identities=16% Similarity=0.269 Sum_probs=134.5
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----------cEEEEEecCCceEEEEEECCCCCEEEEe
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG----------KLEQIFDTRGKFTLSIAYSTDGHWIASG 71 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~----------~~~~~~~~~~~~~~~~~~s~d~~~l~~~ 71 (181)
++|..+..++..|.++++++++..+++|+-||+|+.|++... .+...+.+|.+.++.+++|.....|++.
T Consensus 335 epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llsc 414 (577)
T KOG0642|consen 335 EPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSC 414 (577)
T ss_pred eeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeee
Confidence 578888899999999999999999999999999999966422 2234566778888899999988889999
Q ss_pred eCCCcEEEEeCCCC-------------------------C----------------------------------cccEEE
Q psy10953 72 ALDGIINIFDANTG-------------------------H----------------------------------SSWVLS 92 (181)
Q Consensus 72 ~~d~~v~i~d~~~~-------------------------~----------------------------------~~~v~~ 92 (181)
+.||+++.|+.... | ...++.
T Consensus 415 s~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~ 494 (577)
T KOG0642|consen 415 SSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINK 494 (577)
T ss_pred cCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccce
Confidence 99999999985310 0 013455
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 93 TAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+...|.+...+++-.|+.|+++|..++..++... |...+.++++.|+|-+|++++.|+.+++|.+...+
T Consensus 495 vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 495 VVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred EEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchh
Confidence 6788888888999999999999999999888765 78889999999999999999999999999996554
No 152
>KOG0303|consensus
Probab=99.62 E-value=4e-15 Score=112.02 Aligned_cols=145 Identities=23% Similarity=0.369 Sum_probs=115.9
Q ss_pred CCCEEEE---EeCCCcEEEEeC-CCCcEE---EEEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCC----------
Q psy10953 22 DDKYVLS---GSQSGKINLYGV-ETGKLE---QIFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDAN---------- 83 (181)
Q Consensus 22 ~g~~l~~---~~~d~~i~~~d~-~~~~~~---~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~---------- 83 (181)
+.+++|. ++.-|-..+.-+ ++|+.. ..+..|...+..+.|+|- ...|++|+.|.++.+|.+-
T Consensus 43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lte 122 (472)
T KOG0303|consen 43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTE 122 (472)
T ss_pred CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCccc
Confidence 5666653 222334444433 345433 345567777888999995 4678999999999999874
Q ss_pred -----CCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 84 -----TGHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 84 -----~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
.+|...|..++|+|.. +.|++++.|..|.+||..+++.+.++.|++.|++++|+-||.++++.+.|+.|++||.
T Consensus 123 pvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dp 202 (472)
T KOG0303|consen 123 PVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDP 202 (472)
T ss_pred ceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcC
Confidence 3577889999999965 6899999999999999999999989999999999999999999999999999999999
Q ss_pred CCCeeEEEc
Q psy10953 158 KPEEEVEVN 166 (181)
Q Consensus 158 ~~~~~~~~~ 166 (181)
.+++.+...
T Consensus 203 r~~~~v~e~ 211 (472)
T KOG0303|consen 203 RRGTVVSEG 211 (472)
T ss_pred CCCcEeeec
Confidence 988776544
No 153
>KOG1274|consensus
Probab=99.62 E-value=5.1e-14 Score=115.25 Aligned_cols=152 Identities=21% Similarity=0.283 Sum_probs=125.8
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--------CCCcc
Q psy10953 17 VVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN--------TGHSS 88 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~--------~~~~~ 88 (181)
.++..++.++++|+.+++|.+|....++....+....-.+..++++.+|++++.|+.|-.|++.+.. .+|..
T Consensus 60 ~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~a 139 (933)
T KOG1274|consen 60 SSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDA 139 (933)
T ss_pred EEEeecccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCC
Confidence 3455577799999999999999998887665555444556789999999999999999999999875 36888
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee---------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK---------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.|.++.|+|++++||+.+-||+|++||+.++....++. ....+..++|+|+|..++..+.|+.|.+|+...
T Consensus 140 pVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~ 219 (933)
T KOG1274|consen 140 PVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKG 219 (933)
T ss_pred ceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCC
Confidence 99999999999999999999999999999876555442 122356789999999999999999999999988
Q ss_pred CeeEEEcCC
Q psy10953 160 EEEVEVNGG 168 (181)
Q Consensus 160 ~~~~~~~~~ 168 (181)
++..-.+++
T Consensus 220 we~~f~Lr~ 228 (933)
T KOG1274|consen 220 WELQFKLRD 228 (933)
T ss_pred ceeheeecc
Confidence 877655554
No 154
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=1.4e-13 Score=109.27 Aligned_cols=161 Identities=16% Similarity=0.176 Sum_probs=106.6
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEE--
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIF-- 80 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~-- 80 (181)
+..+...+...+|||||+.|+..+.+ ..|.+||+.+++...+....+ ......|+|||+.|+. .+.++...+|
T Consensus 191 l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 191 ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKG-SNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCC-CccceEECCCCCEEEEEEccCCCceEEEE
Confidence 34455567889999999999877653 359999999887655433333 3447899999998875 5667765555
Q ss_pred eCCCC-------CcccEEEEEEcCCCCEEEEEeC-CCcEEEEe--cCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 81 DANTG-------HSSWVLSTAFTRDGKFFISASA-DHTVRVWN--FARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 81 d~~~~-------~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d--~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
|+..+ +........|+|||+.++..+. ++...+|. +.++...............+|||||++++..+.++
T Consensus 270 d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~ 349 (427)
T PRK02889 270 NADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVG 349 (427)
T ss_pred ECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccC
Confidence 44322 2223456789999998776554 45555554 44443222222222344678999999998777543
Q ss_pred ---cEEEEeCCCCeeEEEcCC
Q psy10953 151 ---AVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 151 ---~v~i~~~~~~~~~~~~~~ 168 (181)
.|.+|++.+++...+..+
T Consensus 350 g~~~I~v~d~~~g~~~~lt~~ 370 (427)
T PRK02889 350 GAFKLYVQDLATGQVTALTDT 370 (427)
T ss_pred CcEEEEEEECCCCCeEEccCC
Confidence 599999988766555433
No 155
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=3e-13 Score=107.40 Aligned_cols=162 Identities=15% Similarity=0.142 Sum_probs=110.1
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCC--cEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQ---SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDG--IIN 78 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~--~v~ 78 (181)
..++.++..+...+|||||+.|+..+. +..+.+|++.+++...+....+. ...+.|+|||+.|+.. +.++ .++
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~-~~~~~~SPDG~~La~~~~~~g~~~I~ 270 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH-NGAPAFSPDGSKLAFALSKTGSLNLY 270 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCC-cCCeEECCCCCEEEEEEcCCCCcEEE
Confidence 344555556789999999999986543 45799999998876554433333 3368999999988864 3344 588
Q ss_pred EEeCCCCC-------cccEEEEEEcCCCCEEEEEeCC-C--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 79 IFDANTGH-------SSWVLSTAFTRDGKFFISASAD-H--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 79 i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~~d-~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+||+.++. ...+....|+|+|+.++..+.+ + .|+.+|+.++...............+|+|||++++..+.
T Consensus 271 ~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~ 350 (429)
T PRK03629 271 VMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS 350 (429)
T ss_pred EEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEc
Confidence 89987542 2345678999999988776653 4 455557766543322223334567899999999887664
Q ss_pred C---CcEEEEeCCCCeeEEEcC
Q psy10953 149 D---KAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 149 d---~~v~i~~~~~~~~~~~~~ 167 (181)
+ ..|.+|++.++....+..
T Consensus 351 ~~g~~~I~~~dl~~g~~~~Lt~ 372 (429)
T PRK03629 351 NGGQQHIAKQDLATGGVQVLTD 372 (429)
T ss_pred cCCCceEEEEECCCCCeEEeCC
Confidence 3 358889988776554443
No 156
>KOG0322|consensus
Probab=99.60 E-value=7.8e-15 Score=105.45 Aligned_cols=132 Identities=22% Similarity=0.386 Sum_probs=106.5
Q ss_pred EEEEeCCCcEEEEeCCCCcEEE----------EEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----------
Q psy10953 26 VLSGSQSGKINLYGVETGKLEQ----------IFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---------- 85 (181)
Q Consensus 26 l~~~~~d~~i~~~d~~~~~~~~----------~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---------- 85 (181)
+++|-.+|++.+||+.++..+- -...+...+.++.+.+....=++|+.+..+..|.+...
T Consensus 168 llaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~ 247 (323)
T KOG0322|consen 168 LLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEI 247 (323)
T ss_pred EEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceE
Confidence 4577889999999999873321 22234555678888776555567777778888887521
Q ss_pred --CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 --HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
++..+..+.+-||++.+++++-|+.|++|+.++..++..++ |...|++++|+|+...++++|.|.+|-+|++
T Consensus 248 ~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 248 TLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 23457788999999999999999999999999999888876 7789999999999999999999999999986
No 157
>KOG2106|consensus
Probab=99.60 E-value=1.7e-13 Score=106.13 Aligned_cols=143 Identities=16% Similarity=0.268 Sum_probs=116.7
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
+-.+.|.++.+|+..+++++++|+++++|+ ..+++-.... .....++.|+|.| .++.|...|...+.|.++.
T Consensus 367 h~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~-~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~ 442 (626)
T KOG2106|consen 367 HGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKII-EDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVT 442 (626)
T ss_pred cccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEe-cCceeEeeccCcc-eEEEeeccceEEEEecccceeEE
Confidence 333679999999999999999999999999 4555433322 3335689999999 8999999999999998753
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-ceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-ENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
....+..++|+|+|.+|+.++.|+.|++|-.... ....... +..+|..+.||+|++++.+.+.|-.|..|.
T Consensus 443 ~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 443 IHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred EEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 2567889999999999999999999999987653 3333332 347899999999999999999999999994
No 158
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=5.7e-13 Score=106.10 Aligned_cols=157 Identities=18% Similarity=0.180 Sum_probs=109.3
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCc--EE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQ---SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGI--IN 78 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~--v~ 78 (181)
..++.+...+...+|||||+.|+..+. +..|.+||+.+++...+... ...+....|+|||+.|+. .+.++. ++
T Consensus 195 ~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~-~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 273 (435)
T PRK05137 195 RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNF-PGMTFAPRFSPDGRKVVMSLSQGGNTDIY 273 (435)
T ss_pred EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecC-CCcccCcEECCCCCEEEEEEecCCCceEE
Confidence 445556666889999999999987764 46899999998876554333 334457899999998764 455554 77
Q ss_pred EEeCCCCC-------cccEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 79 IFDANTGH-------SSWVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 79 i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+||+.++. ........|+|||+.++..+. ++ .|+++|+..+...........+...+|||||+.++..+.
T Consensus 274 ~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~ 353 (435)
T PRK05137 274 TMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQ 353 (435)
T ss_pred EEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEEc
Confidence 77876542 233456899999998877664 33 688889876554333233445667889999999987764
Q ss_pred C---CcEEEEeCCCCee
Q psy10953 149 D---KAVHMYSYKPEEE 162 (181)
Q Consensus 149 d---~~v~i~~~~~~~~ 162 (181)
+ ..|.+|+...+..
T Consensus 354 ~~~~~~i~~~d~~~~~~ 370 (435)
T PRK05137 354 GGGQFSIGVMKPDGSGE 370 (435)
T ss_pred CCCceEEEEEECCCCce
Confidence 3 3577888755443
No 159
>KOG2394|consensus
Probab=99.60 E-value=1.4e-14 Score=112.81 Aligned_cols=155 Identities=23% Similarity=0.402 Sum_probs=114.9
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEec----CCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCC-----------
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDT----RGKFTLSIAYSTDG-HWIASGALDGIINIFDANT----------- 84 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~----~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~----------- 84 (181)
|++--+..|=..|.+.+.|-...++..++.. ....+.++.|-|-+ ..++++..+|.+++||...
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~ 262 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA 262 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence 5566677777778888877655433333322 12346688998854 4566678899999997531
Q ss_pred ---C----------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc
Q psy10953 85 ---G----------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP 138 (181)
Q Consensus 85 ---~----------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp 138 (181)
+ -...|+..+|+|||++||+.+.||.++|||+.+.+.+..++ +-+...|++|||
T Consensus 263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSP 342 (636)
T KOG2394|consen 263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSP 342 (636)
T ss_pred cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcC
Confidence 0 01346778999999999999999999999999887776665 557799999999
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeeEEEcCCCCcchhh
Q psy10953 139 DGDKFVSVGEDKAVHMYSYKPEEEVEVNGGGGEEEEE 175 (181)
Q Consensus 139 ~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~ 175 (181)
||++|++|++|--|.+|.+..+..+.---|.+.|...
T Consensus 343 DGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~ 379 (636)
T KOG2394|consen 343 DGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSV 379 (636)
T ss_pred CccEEEecCCcceEEEEEeccceEEEeccccccceee
Confidence 9999999999999999999876666555555555443
No 160
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=1.2e-13 Score=109.76 Aligned_cols=156 Identities=19% Similarity=0.289 Sum_probs=105.7
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee-CCCcEEEE-
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA-LDGIINIF- 80 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-~d~~v~i~- 80 (181)
.+..+...+...+|||||++|+.++.+ ..|++||+.+++...+....+. ...++|+|||++|+.+. .++...+|
T Consensus 198 ~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~-~~~~~wSPDG~~La~~~~~~g~~~Iy~ 276 (429)
T PRK01742 198 IVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH-NGAPAFSPDGSRLAFASSKDGVLNIYV 276 (429)
T ss_pred EeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc-cCceeECCCCCEEEEEEecCCcEEEEE
Confidence 344555567899999999999887654 3699999998865443322222 23689999999888764 67765555
Q ss_pred -eCCCC-------CcccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCC-ceeeeeecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 81 -DANTG-------HSSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARR-ENMHTFKHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 81 -d~~~~-------~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~-~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
|+.++ +...+....|+|||+.++..+ .++...+|++... .......+.. ...+|+|||+.++..+.+
T Consensus 277 ~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~--~~~~~SpDG~~ia~~~~~- 353 (429)
T PRK01742 277 MGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG--YSAQISADGKTLVMINGD- 353 (429)
T ss_pred EECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC--CCccCCCCCCEEEEEcCC-
Confidence 65433 233456789999999766555 5678888876432 1122222322 457899999999888765
Q ss_pred cEEEEeCCCCeeEEE
Q psy10953 151 AVHMYSYKPEEEVEV 165 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~ 165 (181)
.+.+|++.++....+
T Consensus 354 ~i~~~Dl~~g~~~~l 368 (429)
T PRK01742 354 NVVKQDLTSGSTEVL 368 (429)
T ss_pred CEEEEECCCCCeEEe
Confidence 466699887765433
No 161
>KOG1034|consensus
Probab=99.60 E-value=1.1e-13 Score=102.21 Aligned_cols=150 Identities=25% Similarity=0.467 Sum_probs=114.4
Q ss_pred CeeeEEEEEEcC----C-CCEEEEEeCCCcEEEEeCCCCc---EEEEEec--CCceEEEEEECCC----CCEEEEeeCCC
Q psy10953 10 GPVDMWNVVFSP----D-DKYVLSGSQSGKINLYGVETGK---LEQIFDT--RGKFTLSIAYSTD----GHWIASGALDG 75 (181)
Q Consensus 10 ~~~~~~~~~~s~----~-g~~l~~~~~d~~i~~~d~~~~~---~~~~~~~--~~~~~~~~~~s~d----~~~l~~~~~d~ 75 (181)
+...++.++|.+ + .+.+++++ ..++.+|.....- .++.+.. +....+.++|+-| .-++|+++.-|
T Consensus 37 ~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~G 115 (385)
T KOG1034|consen 37 HNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLG 115 (385)
T ss_pred CCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeeccee
Confidence 335678888874 3 33445554 5588889876433 3333322 2233344555443 24678888999
Q ss_pred cEEEEeCCC--------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCE
Q psy10953 76 IINIFDANT--------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDK 142 (181)
Q Consensus 76 ~v~i~d~~~--------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~ 142 (181)
.|++.|+.+ +|...|+.+.+.|+. +++++++.|..|++||+++..++..+. |.+.|.++.|+++|.+
T Consensus 116 vIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~ 195 (385)
T KOG1034|consen 116 VIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDR 195 (385)
T ss_pred EEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCe
Confidence 999999864 577789999999975 799999999999999999999888874 8899999999999999
Q ss_pred EEEEcCCCcEEEEeCCCC
Q psy10953 143 FVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~~ 160 (181)
|++++-|..+.+|++...
T Consensus 196 i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 196 IASCGMDHSLKLWRLNVK 213 (385)
T ss_pred eeccCCcceEEEEecChh
Confidence 999999999999999754
No 162
>KOG2106|consensus
Probab=99.60 E-value=2.6e-13 Score=105.22 Aligned_cols=151 Identities=21% Similarity=0.339 Sum_probs=113.9
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
+.+.|.++.|.++|. +++|..+|.|.+|+..+.+..+....|..-+.+++.-.+|.+| +|+.|..|..||-.-
T Consensus 245 ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~ 322 (626)
T KOG2106|consen 245 EKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRE 322 (626)
T ss_pred cceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEecccccccccc
Confidence 346689999999998 5699999999999998888776555777778899999999855 599999999998320
Q ss_pred -------------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEec-----
Q psy10953 85 -------------------------------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNF----- 116 (181)
Q Consensus 85 -------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~----- 116 (181)
+|......++.+|+..++++++.|+.+++|+-
T Consensus 323 ~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~w 402 (626)
T KOG2106|consen 323 TELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEW 402 (626)
T ss_pred ccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeE
Confidence 11222334677888888888888888888871
Q ss_pred ---------------------------------CCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 117 ---------------------------------ARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 117 ---------------------------------~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
.+...+.......++.+++|+|+|.+|+.|+.|+.|++|.+....+
T Consensus 403 t~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~ 481 (626)
T KOG2106|consen 403 TKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGR 481 (626)
T ss_pred EEEecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCc
Confidence 1111111111244688999999999999999999999999876543
No 163
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=3.9e-13 Score=106.98 Aligned_cols=161 Identities=19% Similarity=0.180 Sum_probs=109.6
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCC--cEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDG--IIN 78 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~--~v~ 78 (181)
..++.+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++...+....+ ......|+|||+.++. .+.++ .++
T Consensus 197 ~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g-~~~~~~~SpDG~~l~~~~s~~g~~~Iy 275 (433)
T PRK04922 197 QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG-INGAPSFSPDGRRLALTLSRDGNPEIY 275 (433)
T ss_pred eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCC-CccCceECCCCCEEEEEEeCCCCceEE
Confidence 3444455557788999999999887643 469999999887655433333 3346899999998764 44454 588
Q ss_pred EEeCCCCC-------cccEEEEEEcCCCCEEEEEeC-CCc--EEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 79 IFDANTGH-------SSWVLSTAFTRDGKFFISASA-DHT--VRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 79 i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~~-d~~--i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+||+.++. .......+|+|+|+.++..+. ++. |+++|+.+++..............+|||||++++..+.
T Consensus 276 ~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~ 355 (433)
T PRK04922 276 VMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHG 355 (433)
T ss_pred EEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEC
Confidence 99987543 222356799999998877664 444 77777766553322222233446899999999887654
Q ss_pred CC---cEEEEeCCCCeeEEEc
Q psy10953 149 DK---AVHMYSYKPEEEVEVN 166 (181)
Q Consensus 149 d~---~v~i~~~~~~~~~~~~ 166 (181)
++ .|.+|++.+++...+.
T Consensus 356 ~~~~~~I~v~d~~~g~~~~Lt 376 (433)
T PRK04922 356 SGGQYRIAVMDLSTGSVRTLT 376 (433)
T ss_pred CCCceeEEEEECCCCCeEECC
Confidence 32 5899999877665443
No 164
>KOG0649|consensus
Probab=99.59 E-value=3.4e-13 Score=96.26 Aligned_cols=144 Identities=19% Similarity=0.366 Sum_probs=115.5
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc---
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS--- 87 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~--- 87 (181)
-.++..+...|..+-+++++.|+.++-||+++|++...+..|.+.+-++.--.....+++|+.||++++||.++++.
T Consensus 114 vPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ 193 (325)
T KOG0649|consen 114 VPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSM 193 (325)
T ss_pred CCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEE
Confidence 34467888898888888888999999999999999999999999888877644455689999999999999986431
Q ss_pred ---------------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 88 ---------------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 88 ---------------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
.+|.+++- +..+++||+ ...+.+|.++..++.+.++.+.++..+.|- .+.++++++.+.|
T Consensus 194 ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~vfpipa~v~~v~F~--~d~vl~~G~g~~v 268 (325)
T KOG0649|consen 194 IEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCVFPIPARVHLVDFV--DDCVLIGGEGNHV 268 (325)
T ss_pred eccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEEEecccceeEeeee--cceEEEeccccce
Confidence 24555543 445777665 678999999999999999988899888885 4467778888888
Q ss_pred EEEeCCC
Q psy10953 153 HMYSYKP 159 (181)
Q Consensus 153 ~i~~~~~ 159 (181)
+-|.+..
T Consensus 269 ~~~~l~G 275 (325)
T KOG0649|consen 269 QSYTLNG 275 (325)
T ss_pred eeeeecc
Confidence 8888754
No 165
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.59 E-value=1.6e-12 Score=100.18 Aligned_cols=162 Identities=32% Similarity=0.541 Sum_probs=129.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEEEe
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQ-SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINIFD 81 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d 81 (181)
...+..+...+..++|+|+++.+++++. |+.+++|++..++....+..+...+.++.|+|++. .+++++.|+.+.+||
T Consensus 148 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd 227 (466)
T COG2319 148 IRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD 227 (466)
T ss_pred EEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEE
Confidence 3456667777889999999998888885 99999999998888887777777788999999998 555558999999998
Q ss_pred CCCC---------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce-eeee-ecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 82 ANTG---------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN-MHTF-KHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 82 ~~~~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
...+ |.... ...|+|++..+++++.++.+++|+...... +... .|...+.++.++|++..+++++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 306 (466)
T COG2319 228 LSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDG 306 (466)
T ss_pred CCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCC
Confidence 6532 22232 227999998888999999999999986654 3333 4677899999999999988888888
Q ss_pred cEEEEeCCCCeeEEEc
Q psy10953 151 AVHMYSYKPEEEVEVN 166 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~ 166 (181)
.+.+|+..........
T Consensus 307 ~~~~~~~~~~~~~~~~ 322 (466)
T COG2319 307 TVRLWDLETGKLLSSL 322 (466)
T ss_pred cEEEEEcCCCceEEEe
Confidence 8999988776554433
No 166
>KOG1034|consensus
Probab=99.59 E-value=1.4e-14 Score=106.90 Aligned_cols=145 Identities=24% Similarity=0.412 Sum_probs=116.3
Q ss_pred eeeEEEEEEcCCCC----EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCC-
Q psy10953 11 PVDMWNVVFSPDDK----YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFDANT- 84 (181)
Q Consensus 11 ~~~~~~~~~s~~g~----~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~- 84 (181)
+...+-++|+.|-. ++|+|+.-|.|++.|+..+++...+..|+..+..+.+.|+. +++++++.|..|++|++.+
T Consensus 89 ~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~ 168 (385)
T KOG1034|consen 89 DESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTD 168 (385)
T ss_pred CcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCC
Confidence 34467888876533 68888999999999999999999999999999999999986 6788999999999999974
Q ss_pred ----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee----ee-----------e--------------
Q psy10953 85 ----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM----HT-----------F-------------- 125 (181)
Q Consensus 85 ----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~----~~-----------~-------------- 125 (181)
+|...|.++.|+++|.++++++.|+++++|++...+.. .. +
T Consensus 169 ~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~d 248 (385)
T KOG1034|consen 169 VCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTD 248 (385)
T ss_pred eEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccc
Confidence 68889999999999999999999999999998632100 00 0
Q ss_pred ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 126 KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 126 ~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
.|...|-|+.|- |+++++-|.++.|..|..
T Consensus 249 iHrnyVDCvrw~--gd~ilSkscenaI~~w~p 278 (385)
T KOG1034|consen 249 IHRNYVDCVRWF--GDFILSKSCENAIVCWKP 278 (385)
T ss_pred cccchHHHHHHH--hhheeecccCceEEEEec
Confidence 022333334332 688999999999999987
No 167
>KOG0650|consensus
Probab=99.58 E-value=1.3e-13 Score=108.71 Aligned_cols=151 Identities=15% Similarity=0.290 Sum_probs=106.0
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCE--EEEeeCCCcEEEEeCCC-
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHW--IASGALDGIINIFDANT- 84 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~--l~~~~~d~~v~i~d~~~- 84 (181)
..+...+.+|+.+|.|.+|++|+.||++++|.+.+++++..++..+ .+.+++|+|.+.. |+++-.+ .+.+.+..-
T Consensus 397 rGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~-~I~~vaw~P~~~~~vLAvA~~~-~~~ivnp~~G 474 (733)
T KOG0650|consen 397 RGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDS-EIRSVAWNPLSDLCVLAVAVGE-CVLIVNPIFG 474 (733)
T ss_pred eccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecc-eeEEEEecCCCCceeEEEEecC-ceEEeCcccc
Confidence 4566778999999999999999999999999999999998887654 4779999997643 3333222 244443210
Q ss_pred --------------------------------------------CCcccEEEEEEcCCCCEEEEEeCC---CcEEEEecC
Q psy10953 85 --------------------------------------------GHSSWVLSTAFTRDGKFFISASAD---HTVRVWNFA 117 (181)
Q Consensus 85 --------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~ 117 (181)
.|...|..+.|+..|.+|++.+.+ ..|.|+++.
T Consensus 475 ~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLS 554 (733)
T KOG0650|consen 475 DRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLS 554 (733)
T ss_pred chhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecc
Confidence 123346667788888888777664 346666653
Q ss_pred C-----------------------------------------Cceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 118 R-----------------------------------------RENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 118 ~-----------------------------------------~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
. +..+.... ....|..++++|.|..+++++.|+.+..+
T Consensus 555 K~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~Wf 634 (733)
T KOG0650|consen 555 KRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWF 634 (733)
T ss_pred cccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEE
Confidence 2 11111111 12246789999999999999999999999
Q ss_pred eCCCC
Q psy10953 156 SYKPE 160 (181)
Q Consensus 156 ~~~~~ 160 (181)
|+...
T Consensus 635 Dldls 639 (733)
T KOG0650|consen 635 DLDLS 639 (733)
T ss_pred EcccC
Confidence 98543
No 168
>KOG0649|consensus
Probab=99.58 E-value=2.9e-13 Score=96.59 Aligned_cols=152 Identities=18% Similarity=0.284 Sum_probs=117.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------CcE-EEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVET---------GKL-EQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~---------~~~-~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
++.=+++|.+++|++|+.+|.|-++.+.. ++. +.-++.|...++.+.|.. ..|++++ ||.|+-|.-+
T Consensus 13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~g-dG~V~gw~W~ 89 (325)
T KOG0649|consen 13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGG-DGLVYGWEWN 89 (325)
T ss_pred HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeecc-CceEEEeeeh
Confidence 45567899999999999999999998742 222 223356777788999873 3455444 6999988632
Q ss_pred C---------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCC
Q psy10953 84 T---------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGD 141 (181)
Q Consensus 84 ~---------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~ 141 (181)
. -+...|+++.+.|..+.++.++-|+.++-||+.+++....+. |++.+.+++.-....
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~ 169 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANG 169 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCc
Confidence 1 012357899999988877777889999999999999988887 889999988744555
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 142 KFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
.+.+|++||++++||.++.+.+.+.+.
T Consensus 170 qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 170 QILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred ceeecCCCccEEEEeccccceeEEecc
Confidence 788899999999999999988776554
No 169
>KOG1523|consensus
Probab=99.58 E-value=1.4e-13 Score=101.31 Aligned_cols=152 Identities=9% Similarity=0.128 Sum_probs=126.8
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK---LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+......+++.+|++|+..+|.+.+...|.+|.....+ ..+.+..|...+.+++|+|..+.|++++.|...++|..
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 344566778999999999999999999999999987665 44666667777889999999999999999999999988
Q ss_pred CCC-----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee-----eeecCCcEEEEEEccCCCEEEEE
Q psy10953 83 NTG-----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH-----TFKHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 83 ~~~-----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~-----~~~~~~~v~~~~~sp~g~~l~~~ 146 (181)
..+ ++....++.|+|.++.+++++.-+.|.||-+.....=. ..++...|.++.++|++-.+++|
T Consensus 85 ~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaG 164 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAG 164 (361)
T ss_pred CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccc
Confidence 432 45677899999999999999999999999876654321 22345678999999999999999
Q ss_pred cCCCcEEEEeC
Q psy10953 147 GEDKAVHMYSY 157 (181)
Q Consensus 147 ~~d~~v~i~~~ 157 (181)
|.|+..+++..
T Consensus 165 s~D~k~rVfSa 175 (361)
T KOG1523|consen 165 STDGKCRVFSA 175 (361)
T ss_pred ccCcceeEEEE
Confidence 99999999885
No 170
>KOG1445|consensus
Probab=99.58 E-value=1.2e-14 Score=115.37 Aligned_cols=142 Identities=25% Similarity=0.452 Sum_probs=114.8
Q ss_pred EcCCCCEEEE--EeCCCcEEEEeCC-CCcEE----EEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEEeCC-------
Q psy10953 19 FSPDDKYVLS--GSQSGKINLYGVE-TGKLE----QIFDTRGKFTLSIAYST-DGHWIASGALDGIINIFDAN------- 83 (181)
Q Consensus 19 ~s~~g~~l~~--~~~d~~i~~~d~~-~~~~~----~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d~~------- 83 (181)
|+.+..++|. ++.-|.|-+|++. .|++- ..+. .+..+..+.|.| |...|+.+..||.|.+|.+.
T Consensus 587 fcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~ 665 (1012)
T KOG1445|consen 587 FCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPEN 665 (1012)
T ss_pred eeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcc
Confidence 5566777663 4557899999985 44432 1121 355677899999 66789999999999999874
Q ss_pred --------CCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 84 --------TGHSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 84 --------~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
+.|...|+.+.|+|- ...|++++.|-+|++||+++.+....+. |.+.|.+++|||+|+.+++.+.|++++
T Consensus 666 ~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~r 745 (1012)
T KOG1445|consen 666 EMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLR 745 (1012)
T ss_pred cCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEE
Confidence 246678999999995 5789999999999999999988777665 999999999999999999999999999
Q ss_pred EEeCCCCe
Q psy10953 154 MYSYKPEE 161 (181)
Q Consensus 154 i~~~~~~~ 161 (181)
+|+-..++
T Consensus 746 Vy~Prs~e 753 (1012)
T KOG1445|consen 746 VYEPRSRE 753 (1012)
T ss_pred EeCCCCCC
Confidence 99976543
No 171
>KOG0307|consensus
Probab=99.57 E-value=1.4e-14 Score=120.67 Aligned_cols=169 Identities=15% Similarity=0.246 Sum_probs=125.5
Q ss_pred eeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEE--ecCCceEEEEEECCCC-CEEEEeeCCCcEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIF--DTRGKFTLSIAYSTDG-HWIASGALDGIINI 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i 79 (181)
|.+...+...|..+.|++.+. +||+|++||.|.|||+..-+.-... ......+.+++|...- ..|++++.+|.+.+
T Consensus 109 la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~i 188 (1049)
T KOG0307|consen 109 LATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVI 188 (1049)
T ss_pred HhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCcee
Confidence 456677888899999999776 8999999999999999753321111 1123456789998754 45778899999999
Q ss_pred EeCCCCC----------cccEEEEEEcCCCC-EEEEEeCCC---cEEEEecCCCc-eeeee-ecCCcEEEEEEccCC-CE
Q psy10953 80 FDANTGH----------SSWVLSTAFTRDGK-FFISASADH---TVRVWNFARRE-NMHTF-KHADQVWCVCVAPDG-DK 142 (181)
Q Consensus 80 ~d~~~~~----------~~~v~~~~~s~~~~-~l~~~~~d~---~i~v~d~~~~~-~~~~~-~~~~~v~~~~~sp~g-~~ 142 (181)
||++... ...+..++|+|++- .+++++.|. .|.+||++.-. .+..+ .|...|.++.|.+.+ ++
T Consensus 189 WDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~l 268 (1049)
T KOG0307|consen 189 WDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRL 268 (1049)
T ss_pred ccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchh
Confidence 9998542 12356899999873 555555543 59999998643 44455 377789999999876 88
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEcCCCCcc
Q psy10953 143 FVSVGEDKAVHMYSYKPEEEVEVNGGGGEE 172 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~ 172 (181)
+++++.|++|.+|+..+++.+....-++.|
T Consensus 269 llSsgkD~~ii~wN~~tgEvl~~~p~~~nW 298 (1049)
T KOG0307|consen 269 LLSSGKDNRIICWNPNTGEVLGELPAQGNW 298 (1049)
T ss_pred hhcccCCCCeeEecCCCceEeeecCCCCcc
Confidence 999999999999999998877644444333
No 172
>KOG1188|consensus
Probab=99.57 E-value=9.5e-14 Score=102.89 Aligned_cols=137 Identities=19% Similarity=0.335 Sum_probs=105.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC--CCCEEEEeeCCCcEEEEeCCCC----------Cc-ccE
Q psy10953 24 KYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST--DGHWIASGALDGIINIFDANTG----------HS-SWV 90 (181)
Q Consensus 24 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i~d~~~~----------~~-~~v 90 (181)
..+|++...+.|++||..+++.+..|..+...+..+.|.. ....+.+++.||.|++||++.. +. ..-
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 4688888899999999999999998888776666777765 3456788999999999999753 22 122
Q ss_pred EEEEEcCCCCEEEEEeC----CCcEEEEecCCCce-eeee--ecCCcEEEEEEccC-CCEEEEEcCCCcEEEEeCCCC
Q psy10953 91 LSTAFTRDGKFFISASA----DHTVRVWNFARREN-MHTF--KHADQVWCVCVAPD-GDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 91 ~~~~~s~~~~~l~~~~~----d~~i~v~d~~~~~~-~~~~--~~~~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.+++..-+++.+++++. +-.+.+||.+..+. +..+ .|.+.|++++|+|+ .+.|++||-||-|.+||++..
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 34444435667776653 56799999997654 5555 38899999999995 578899999999999998654
No 173
>KOG2445|consensus
Probab=99.57 E-value=6.1e-13 Score=97.57 Aligned_cols=157 Identities=16% Similarity=0.298 Sum_probs=112.3
Q ss_pred eeeecc-CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--Cc--EEEEEecCCceEEEEEECC--CCCEEEEeeCCCc
Q psy10953 4 ISKINV-GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET--GK--LEQIFDTRGKFTLSIAYST--DGHWIASGALDGI 76 (181)
Q Consensus 4 ~~~~~~-~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~--~~--~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~ 76 (181)
++.++. +..-+.++.|.+-|+++|+++.|+++++||.+. ++ +......|+..+..+.|.+ -|+.+++.+.|++
T Consensus 5 ~~pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drt 84 (361)
T KOG2445|consen 5 MAPIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRT 84 (361)
T ss_pred ccccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCc
Confidence 333443 334468999999999999999999999999642 32 3345556777677777744 5899999999999
Q ss_pred EEEEeCC----C-------------CCcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCc------eeeeee-----
Q psy10953 77 INIFDAN----T-------------GHSSWVLSTAFTRD--GKFFISASADHTVRVWNFARRE------NMHTFK----- 126 (181)
Q Consensus 77 v~i~d~~----~-------------~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~------~~~~~~----- 126 (181)
+.+|.-. . ...+.|+++.|.|. |-.+++++.||.++||+..... .++.+.
T Consensus 85 v~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~p 164 (361)
T KOG2445|consen 85 VSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDP 164 (361)
T ss_pred eeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCC
Confidence 9999742 1 12356889999996 5689999999999999865432 222222
Q ss_pred ---cCCcEEEEEEccC---CCEEEEEcCC-----CcEEEEeCCCC
Q psy10953 127 ---HADQVWCVCVAPD---GDKFVSVGED-----KAVHMYSYKPE 160 (181)
Q Consensus 127 ---~~~~v~~~~~sp~---g~~l~~~~~d-----~~v~i~~~~~~ 160 (181)
+....-|+.+.|. ..+|++|+.+ +.++||.....
T Consensus 165 p~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~ 209 (361)
T KOG2445|consen 165 PGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNEN 209 (361)
T ss_pred cccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCC
Confidence 3344567788764 4567777755 47888887543
No 174
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.56 E-value=1.9e-12 Score=102.35 Aligned_cols=158 Identities=18% Similarity=0.164 Sum_probs=109.3
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCC--CcEEEE
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALD--GIINIF 80 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d--~~v~i~ 80 (181)
+..+...+...+|+|||++|+.+..+ ..|++||+.+++....... ......++|+|||+.|+.. +.+ ..+++|
T Consensus 185 l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~ 263 (417)
T TIGR02800 185 ITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASF-PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVM 263 (417)
T ss_pred eecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecC-CCCccceEECCCCCEEEEEECCCCCccEEEE
Confidence 33334346788999999999877644 4799999998876554433 3334568999999987753 433 358888
Q ss_pred eCCCCC-------cccEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 81 DANTGH-------SSWVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 81 d~~~~~-------~~~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
|+.++. ........|+|+|+.++..+. ++ .|+++|+.+++..............+|+|+|++++.++.++
T Consensus 264 d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~ 343 (417)
T TIGR02800 264 DLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREG 343 (417)
T ss_pred ECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccC
Confidence 886542 122345789999998776654 33 58888887765433333445567789999999998888765
Q ss_pred ---cEEEEeCCCCeeEEE
Q psy10953 151 ---AVHMYSYKPEEEVEV 165 (181)
Q Consensus 151 ---~v~i~~~~~~~~~~~ 165 (181)
.|.+|++.++....+
T Consensus 344 ~~~~i~~~d~~~~~~~~l 361 (417)
T TIGR02800 344 GGFNIAVMDLDGGGERVL 361 (417)
T ss_pred CceEEEEEeCCCCCeEEc
Confidence 788888877554433
No 175
>KOG0290|consensus
Probab=99.56 E-value=1.2e-13 Score=100.55 Aligned_cols=147 Identities=16% Similarity=0.273 Sum_probs=112.9
Q ss_pred EEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCc---EEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCCcc
Q psy10953 14 MWNVVFS-PDDKYVLSGSQSGKINLYGVETGK---LEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFDANTGHSS 88 (181)
Q Consensus 14 ~~~~~~s-~~g~~l~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d~~~~~~~ 88 (181)
..+..|. -|-+++.+++-|.++.+||++++. +...+-.|...+..++|...+ +.|++.+.||.|+++|++.-+.+
T Consensus 153 lTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS 232 (364)
T KOG0290|consen 153 LTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS 232 (364)
T ss_pred ccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc
Confidence 4556665 377889999999999999999863 344555677778999999866 57888999999999999854322
Q ss_pred -----------cEEEEEEcCC-CCEEEEEeCC-CcEEEEecCCCc-eeeeee-cCCcEEEEEEccC-CCEEEEEcCCCcE
Q psy10953 89 -----------WVLSTAFTRD-GKFFISASAD-HTVRVWNFARRE-NMHTFK-HADQVWCVCVAPD-GDKFVSVGEDKAV 152 (181)
Q Consensus 89 -----------~v~~~~~s~~-~~~l~~~~~d-~~i~v~d~~~~~-~~~~~~-~~~~v~~~~~sp~-g~~l~~~~~d~~v 152 (181)
....++|+++ -+++++-..| ..|.+.|++... ++..+. |...|++++|.|. ...|++++.|..+
T Consensus 233 TIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qa 312 (364)
T KOG0290|consen 233 TIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQA 312 (364)
T ss_pred eEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceE
Confidence 2345667764 4677776654 569999998754 455554 8889999999996 4578999999999
Q ss_pred EEEeCCCC
Q psy10953 153 HMYSYKPE 160 (181)
Q Consensus 153 ~i~~~~~~ 160 (181)
.+||+.+.
T Consensus 313 liWDl~q~ 320 (364)
T KOG0290|consen 313 LIWDLQQM 320 (364)
T ss_pred EEEecccc
Confidence 99999754
No 176
>KOG1063|consensus
Probab=99.56 E-value=1.9e-13 Score=109.14 Aligned_cols=156 Identities=19% Similarity=0.308 Sum_probs=118.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-EEEE---EecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK-LEQI---FDTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-~~~~---~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
+.+.+..+...+..++|||||++|++.+.|.++.+|....+. .... ...|...+....|+|++.+|++++.|++|+
T Consensus 564 ~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~Vk 643 (764)
T KOG1063|consen 564 QVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVK 643 (764)
T ss_pred hhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEE
Confidence 445688899999999999999999999999999999875332 2222 334677788999999999999999999999
Q ss_pred EEeCCCC------------CcccEEEEEEcCC-----CCEEEEEeCCCcEEEEecCCCce---e----------eeeecC
Q psy10953 79 IFDANTG------------HSSWVLSTAFTRD-----GKFFISASADHTVRVWNFARREN---M----------HTFKHA 128 (181)
Q Consensus 79 i~d~~~~------------~~~~v~~~~~s~~-----~~~l~~~~~d~~i~v~d~~~~~~---~----------~~~~~~ 128 (181)
+|..... +...|+++++.|- +..++.|-..|.|.+|....... . ..+.+.
T Consensus 644 VW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 723 (764)
T KOG1063|consen 644 VWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPD 723 (764)
T ss_pred EEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChH
Confidence 9986532 3456888888772 23667788899999998652110 0 112245
Q ss_pred CcEEEEEEccC----------CCEEEEEcCCCcEEEEeCC
Q psy10953 129 DQVWCVCVAPD----------GDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 129 ~~v~~~~~sp~----------g~~l~~~~~d~~v~i~~~~ 158 (181)
..|+.++|.|. ...|++|+.|..+++++..
T Consensus 724 ~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D~~vri~nv~ 763 (764)
T KOG1063|consen 724 SAVNRLLWRPTCSDDWVEDKEWLNLAVGGDDESVRIFNVD 763 (764)
T ss_pred HhhheeEeccccccccccccceeEEeeecccceeEEeecc
Confidence 57888999975 2357999999999999864
No 177
>KOG1408|consensus
Probab=99.55 E-value=2.2e-13 Score=109.52 Aligned_cols=156 Identities=17% Similarity=0.259 Sum_probs=126.6
Q ss_pred eeeeccCeeeEEEEEEcCCC--CEEEEEeCCCcEEEEeCC---CCcEEEE-Ee-cCCceEEEEEECCCCCEEEEeeCCCc
Q psy10953 4 ISKINVGPVDMWNVVFSPDD--KYVLSGSQSGKINLYGVE---TGKLEQI-FD-TRGKFTLSIAYSTDGHWIASGALDGI 76 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g--~~l~~~~~d~~i~~~d~~---~~~~~~~-~~-~~~~~~~~~~~s~d~~~l~~~~~d~~ 76 (181)
.+.+..+...+.++.|..+| ..+++++.|+.|.+-..+ ++.+... .. ....-.+.|+..|..++++++..|..
T Consensus 540 ~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrn 619 (1080)
T KOG1408|consen 540 VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRN 619 (1080)
T ss_pred hhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccc
Confidence 34555667778999998877 678899999888755333 1222111 00 11234678999999999999999999
Q ss_pred EEEEeCCCC-----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEE
Q psy10953 77 INIFDANTG-----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 77 v~i~d~~~~-----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~ 144 (181)
|++||+..+ |.+....+.++|.|.++++.+.|+++.++|+-+++++.+.. |...|+++-|++|.+.|+
T Consensus 620 irif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlI 699 (1080)
T KOG1408|consen 620 IRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLI 699 (1080)
T ss_pred eEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhhe
Confidence 999999753 45667889999999999999999999999999999998775 888899999999999999
Q ss_pred EEcCCCcEEEEeCCC
Q psy10953 145 SVGEDKAVHMYSYKP 159 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~ 159 (181)
+++.|+-|.+|.+..
T Consensus 700 SvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 700 SVSGDGCIFVWKLPL 714 (1080)
T ss_pred eecCCceEEEEECch
Confidence 999999999999854
No 178
>KOG2919|consensus
Probab=99.55 E-value=4.4e-13 Score=99.02 Aligned_cols=146 Identities=21% Similarity=0.347 Sum_probs=114.8
Q ss_pred EEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCCC------
Q psy10953 14 MWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANTG------ 85 (181)
Q Consensus 14 ~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~~------ 85 (181)
+++++|+|-.. .++.++.-.++-+|.-..+..++++..|+.-+.-++|.+||+.|++|+. |..|-.||++..
T Consensus 210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~ 289 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYA 289 (406)
T ss_pred eeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhh
Confidence 58899999655 7899999999999988888888888788777889999999999999875 778999999731
Q ss_pred ---C---cccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-Cceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 ---H---SSWVLSTAFTRDGKFFISASADHTVRVWNFAR-RENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 ---~---~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
| ++.-....+.|.+++|++|+.||.|++||++. +..+..+. +.+.++.++++|-=..+++++.. ++|..
T Consensus 290 L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq---r~f~~ 366 (406)
T KOG2919|consen 290 LERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ---RIFKY 366 (406)
T ss_pred hhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc---eeecC
Confidence 2 22223456678999999999999999999988 55455554 77889999999997677776654 45555
Q ss_pred CCCee
Q psy10953 158 KPEEE 162 (181)
Q Consensus 158 ~~~~~ 162 (181)
.+...
T Consensus 367 ~~dD~ 371 (406)
T KOG2919|consen 367 PKDDN 371 (406)
T ss_pred CCccc
Confidence 44433
No 179
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=1.7e-12 Score=103.17 Aligned_cols=152 Identities=17% Similarity=0.234 Sum_probs=103.2
Q ss_pred eEEEEEEcCCCCEEEEE-eCCC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC-C--cEEEEeCCCCC
Q psy10953 13 DMWNVVFSPDDKYVLSG-SQSG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD-G--IINIFDANTGH 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~-~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d-~--~v~i~d~~~~~ 86 (181)
.....+|||||+.|+.. +.++ .|.+||+++++..++..... ......|+|||+.|+..+.+ + .++.+|+.++.
T Consensus 244 ~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~-~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~ 322 (429)
T PRK03629 244 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS-NNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA 322 (429)
T ss_pred CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCC-CcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC
Confidence 34568999999988754 4444 58899999888766554433 34578999999998876653 3 45555665432
Q ss_pred -------cccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCc---EE
Q psy10953 87 -------SSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKA---VH 153 (181)
Q Consensus 87 -------~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~---v~ 153 (181)
........|+|+|++++..+.+ ..|++||+.++... .+..........|+|||+.++..+.++. +.
T Consensus 323 ~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~ 401 (429)
T PRK03629 323 PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLN 401 (429)
T ss_pred eEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCCCCCCceECCCCCEEEEEEcCCCceEEE
Confidence 1234467899999988776543 35888998877533 2222223446789999999998887653 67
Q ss_pred EEeCCCCeeEEEc
Q psy10953 154 MYSYKPEEEVEVN 166 (181)
Q Consensus 154 i~~~~~~~~~~~~ 166 (181)
++++..+.+..+.
T Consensus 402 ~~~~~G~~~~~l~ 414 (429)
T PRK03629 402 LVSTDGRFKARLP 414 (429)
T ss_pred EEECCCCCeEECc
Confidence 7777555454443
No 180
>KOG1007|consensus
Probab=99.55 E-value=2.9e-13 Score=98.65 Aligned_cols=149 Identities=21% Similarity=0.386 Sum_probs=115.9
Q ss_pred eeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCcEEEEEe-cCCceEEEEEECCCCCE-EEEeeCCCcEEEEeCCC--
Q psy10953 11 PVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGKLEQIFD-TRGKFTLSIAYSTDGHW-IASGALDGIINIFDANT-- 84 (181)
Q Consensus 11 ~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d~~~-l~~~~~d~~v~i~d~~~-- 84 (181)
....++-+||| ||+.+++.+ |++++.||+++.+....+. .|+..+..+.|.|+.++ |++++.||.|++||.+.
T Consensus 170 ~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk 248 (370)
T KOG1007|consen 170 RHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK 248 (370)
T ss_pred cceecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC
Confidence 34456778888 788887775 8899999999877665443 57788889999998764 67899999999999874
Q ss_pred -------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCC-----------------------C-c-----eeeee-e
Q psy10953 85 -------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFAR-----------------------R-E-----NMHTF-K 126 (181)
Q Consensus 85 -------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~-----------------------~-~-----~~~~~-~ 126 (181)
+|.-+|.++.|+|.. +++++++.|..|.+|.... . + .+.++ .
T Consensus 249 ~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyde 328 (370)
T KOG1007|consen 249 FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDE 328 (370)
T ss_pred ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccc
Confidence 577899999999965 6889999999999996421 0 0 11233 3
Q ss_pred cCCcEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCC
Q psy10953 127 HADQVWCVCVAP-DGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 127 ~~~~v~~~~~sp-~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
|.+.|++++||. |.-.|++-+.||++.|=+....
T Consensus 329 hEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r~ 363 (370)
T KOG1007|consen 329 HEDSVYALAWSSADPWIFASLSYDGRVIISSVPRF 363 (370)
T ss_pred cccceEEEeeccCCCeeEEEeccCceEEeecCChh
Confidence 788999999986 5566888999999988766543
No 181
>KOG1272|consensus
Probab=99.55 E-value=2.4e-14 Score=109.82 Aligned_cols=142 Identities=20% Similarity=0.358 Sum_probs=120.9
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-------- 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-------- 84 (181)
.+.-+.|-|..=+|++++..|.++..|+.+|+++..+......+..++-.|-+..+-+|..+|+|.+|....
T Consensus 211 ~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL 290 (545)
T KOG1272|consen 211 RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL 290 (545)
T ss_pred chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence 355678888888999999999999999999999888777666666789999999999999999999999874
Q ss_pred CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 85 GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 85 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
.|.+.|.++++.++|++++|.+.|..++|||++....+.++..+.....++||..| +++.|....|.+|.
T Consensus 291 cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 291 CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc--ceeeecCCeeeeeh
Confidence 47899999999999999999999999999999998777766655667788888766 45555566788886
No 182
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.54 E-value=8.4e-13 Score=94.10 Aligned_cols=107 Identities=22% Similarity=0.458 Sum_probs=80.8
Q ss_pred eEEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC---CCcEEEEeCCCC--
Q psy10953 13 DMWNVVFSPDDKYVLSG--SQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---DGIINIFDANTG-- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---d~~v~i~d~~~~-- 85 (181)
.+.+++|+|+|+.+++. ..+..|.+||++ ++.+..+. ......+.|+|+|+++++++. .|.+.+||.++.
T Consensus 61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~ 137 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK 137 (194)
T ss_pred ceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence 48999999999997644 456799999997 44444443 333457999999999998764 366999999742
Q ss_pred ----CcccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCceee
Q psy10953 86 ----HSSWVLSTAFTRDGKFFISASA------DHTVRVWNFARRENMH 123 (181)
Q Consensus 86 ----~~~~v~~~~~s~~~~~l~~~~~------d~~i~v~d~~~~~~~~ 123 (181)
+...+..++|+|+|++++++.. |..++||++. ++.+.
T Consensus 138 i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~ 184 (194)
T PF08662_consen 138 ISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLY 184 (194)
T ss_pred eeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeE
Confidence 3345789999999999998874 5678889874 44443
No 183
>KOG1523|consensus
Probab=99.54 E-value=3.1e-13 Score=99.51 Aligned_cols=155 Identities=15% Similarity=0.192 Sum_probs=122.5
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeC-CCCcEEE--EEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGV-ETGKLEQ--IFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~-~~~~~~~--~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+...+..++|+|..++|++++.|...++|.. ..++... .+-..+....++.|+|.++.|++|+.-..+.+|=.
T Consensus 50 tls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~ 129 (361)
T KOG1523|consen 50 TLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY 129 (361)
T ss_pred ehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence 34445666888999999999999999999999998 5554443 23335666779999999999999999999888854
Q ss_pred C------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC------------------Cceeeee-ecCCcE
Q psy10953 83 N------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR------------------RENMHTF-KHADQV 131 (181)
Q Consensus 83 ~------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~------------------~~~~~~~-~~~~~v 131 (181)
+ +...+.|.++.|+|++-+|++|+.|+.+++|...- +..+.++ ...+.+
T Consensus 130 E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwv 209 (361)
T KOG1523|consen 130 EQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWV 209 (361)
T ss_pred ecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCce
Confidence 3 34456789999999999999999999999997421 1222333 245679
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 132 WCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
..+.|+|+|..|+=.+.|..+.+-|....
T Consensus 210 h~v~fs~sG~~lawv~Hds~v~~~da~~p 238 (361)
T KOG1523|consen 210 HGVLFSPSGNRLAWVGHDSTVSFVDAAGP 238 (361)
T ss_pred eeeEeCCCCCEeeEecCCCceEEeecCCC
Confidence 99999999999999999999998886443
No 184
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.54 E-value=2.7e-12 Score=98.62 Aligned_cols=146 Identities=15% Similarity=0.244 Sum_probs=104.3
Q ss_pred eEEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCcEE--EEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCC-C-
Q psy10953 13 DMWNVVFSPDDKYVLSGS-QSGKINLYGVE-TGKLE--QIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANT-G- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~-~~~~~--~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~-~- 85 (181)
....++++|++++|++++ .++.|.+|++. ++++. ......+ ....+.++|+++++++++. ++.+.+|++.. +
T Consensus 36 ~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~-~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~ 114 (330)
T PRK11028 36 QVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPG-SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGI 114 (330)
T ss_pred CCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCC-CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCC
Confidence 356789999999987664 57889999986 44442 2222222 2347999999998887654 88999998852 1
Q ss_pred ---------CcccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCceee-------eeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 86 ---------HSSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARRENMH-------TFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 86 ---------~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~-------~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
....+..++++|+|+++++++ .++.|.+||+.+...+. .......+..++|+|+|++++++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~ 194 (330)
T PRK11028 115 PVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNE 194 (330)
T ss_pred CCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEec
Confidence 112345678999999875555 56899999997633221 1122345678999999999988876
Q ss_pred -CCcEEEEeCCC
Q psy10953 149 -DKAVHMYSYKP 159 (181)
Q Consensus 149 -d~~v~i~~~~~ 159 (181)
++.|.+|++..
T Consensus 195 ~~~~v~v~~~~~ 206 (330)
T PRK11028 195 LNSSVDVWQLKD 206 (330)
T ss_pred CCCEEEEEEEeC
Confidence 89999999974
No 185
>KOG1188|consensus
Probab=99.52 E-value=8.2e-13 Score=98.00 Aligned_cols=158 Identities=15% Similarity=0.264 Sum_probs=118.8
Q ss_pred eeeeccCeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc---eEEEEEECCCCCEEEEee----CC
Q psy10953 4 ISKINVGPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK---FTLSIAYSTDGHWIASGA----LD 74 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~s~d~~~l~~~~----~d 74 (181)
+..+-..|..+..+.|.. .+..+.+++.||+|++||++.......+...+. ...++...-.++.+++|. .+
T Consensus 63 l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~ 142 (376)
T KOG1188|consen 63 LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSD 142 (376)
T ss_pred hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCc
Confidence 344555666677888876 466788999999999999997766655443322 222444443567777774 47
Q ss_pred CcEEEEeCCC----------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCc----eeeeeecCCcEEEEEEccC
Q psy10953 75 GIINIFDANT----------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRE----NMHTFKHADQVWCVCVAPD 139 (181)
Q Consensus 75 ~~v~i~d~~~----------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~~~v~~~~~sp~ 139 (181)
..|.+||.+. .|...|+.+.|+|.. ++|++|+.||-+.+||++... ....+.+...|.++.|..+
T Consensus 143 A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~ 222 (376)
T KOG1188|consen 143 ASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSK 222 (376)
T ss_pred eEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecC
Confidence 7899999874 377789999999964 799999999999999997542 3445567777999999877
Q ss_pred C-CEEEEEcCCCcEEEEeCCCCe
Q psy10953 140 G-DKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 140 g-~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+ ++|.+-+......+|++..+.
T Consensus 223 ~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 223 KYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred CcceEEEEEccCceeEEEccCCC
Confidence 6 468888999999999997764
No 186
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.52 E-value=3.2e-12 Score=98.22 Aligned_cols=146 Identities=11% Similarity=0.268 Sum_probs=102.8
Q ss_pred eEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCc-EEE----EEe-cCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCC
Q psy10953 13 DMWNVVFSPDDKYVLSGS-QSGKINLYGVETGK-LEQ----IFD-TRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANT 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~~~~-~~~----~~~-~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~ 84 (181)
.+..++++|+|+++++++ .+++|.+||+.+.. +.. ... ..+.....+.|+|+|++++++.. ++.+.+|++..
T Consensus 127 ~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 127 GCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred cccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 356788999999986544 56899999997633 211 011 11233457899999999988765 89999999862
Q ss_pred --CC----------------cccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCc-e---eeeeecCCcEEEEEEccCCC
Q psy10953 85 --GH----------------SSWVLSTAFTRDGKFFISASA-DHTVRVWNFARRE-N---MHTFKHADQVWCVCVAPDGD 141 (181)
Q Consensus 85 --~~----------------~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~-~---~~~~~~~~~v~~~~~sp~g~ 141 (181)
+. ..+...+.++|+|++++++.. ++.|.+|++.... . +....-....+.++++|+|+
T Consensus 207 ~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~ 286 (330)
T PRK11028 207 PHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGK 286 (330)
T ss_pred CCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCC
Confidence 11 012235789999998888764 6889999986432 1 22222223466889999999
Q ss_pred EEEEEcC-CCcEEEEeCC
Q psy10953 142 KFVSVGE-DKAVHMYSYK 158 (181)
Q Consensus 142 ~l~~~~~-d~~v~i~~~~ 158 (181)
+++++.. ++.|.+|++.
T Consensus 287 ~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 287 YLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEEEEEccCCcEEEEEEc
Confidence 9988776 8899999885
No 187
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.52 E-value=8.1e-12 Score=99.35 Aligned_cols=162 Identities=19% Similarity=0.157 Sum_probs=107.7
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCC--cEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDG--IIN 78 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~--~v~ 78 (181)
+.+..+...+...+|||||++|+..+.+ ..|.+||+.+++...+....+ ......|+|||+.|+. .+.++ .++
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g-~~~~~~~SpDG~~la~~~~~~g~~~Iy 270 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEG-LNGAPAWSPDGSKLAFVLSKDGNPEIY 270 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCC-CcCCeEECCCCCEEEEEEccCCCceEE
Confidence 3344455557888999999999876644 368899999887655443332 2336899999998875 44444 678
Q ss_pred EEeCCCCCc-------ccEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 79 IFDANTGHS-------SWVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 79 i~d~~~~~~-------~~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
++|+.++.. .......|+|+|+.++..+. ++ .|+++|+.+++..............+|+|||+.++..+.
T Consensus 271 ~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~ 350 (430)
T PRK00178 271 VMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHR 350 (430)
T ss_pred EEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEc
Confidence 889875432 22445789999997766553 33 577888877653322222223345789999999987765
Q ss_pred C-C--cEEEEeCCCCeeEEEcC
Q psy10953 149 D-K--AVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 149 d-~--~v~i~~~~~~~~~~~~~ 167 (181)
+ + .|.++++.+++...+..
T Consensus 351 ~~~~~~l~~~dl~tg~~~~lt~ 372 (430)
T PRK00178 351 QDGNFHVAAQDLQRGSVRILTD 372 (430)
T ss_pred cCCceEEEEEECCCCCEEEccC
Confidence 3 3 57888888776544443
No 188
>KOG1009|consensus
Probab=99.51 E-value=1.3e-13 Score=104.16 Aligned_cols=144 Identities=20% Similarity=0.360 Sum_probs=111.2
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC--------C--------CcEEEEEecCCceEEEEEECCCCCE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE--------T--------GKLEQIFDTRGKFTLSIAYSTDGHW 67 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~--------~--------~~~~~~~~~~~~~~~~~~~s~d~~~ 67 (181)
+..+.-+...+..+.|+|+|.+||+|++++++.+|-.. + ......+..|...++.++|+||++.
T Consensus 58 ~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~ 137 (434)
T KOG1009|consen 58 LSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNF 137 (434)
T ss_pred eecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCce
Confidence 34556677778999999999999999999999999655 2 1122344456677889999999999
Q ss_pred EEEeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee--------------
Q psy10953 68 IASGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-------------- 125 (181)
Q Consensus 68 l~~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-------------- 125 (181)
+++++-|+.+.+||+.. .|..++..++|.|-++++++-+.|...+.+.+.........
T Consensus 138 l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e 217 (434)
T KOG1009|consen 138 LVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNERE 217 (434)
T ss_pred eeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCC
Confidence 99999999999999874 47788999999999999999999987777776432211111
Q ss_pred ------ec----CCcEEEEEEccCCCEEEEEc
Q psy10953 126 ------KH----ADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 126 ------~~----~~~v~~~~~sp~g~~l~~~~ 147 (181)
-| ..-...++|+|+|..+++.+
T Consensus 218 ~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 218 GKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred cceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 01 11245689999999998866
No 189
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=3e-12 Score=101.77 Aligned_cols=141 Identities=19% Similarity=0.238 Sum_probs=96.9
Q ss_pred EEEEEEcCCCCEEEEEe-CCCcEEEE--eCCCCcEEEEEecCCceEEEEEECCCCCEEEEee-CCCcEEEEeCCC--CCc
Q psy10953 14 MWNVVFSPDDKYVLSGS-QSGKINLY--GVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA-LDGIINIFDANT--GHS 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~-~d~~i~~~--d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-~d~~v~i~d~~~--~~~ 87 (181)
...++|+|||++|+.++ .++.+.+| |+.+++..++.. +........|+|||+.|+..+ .++...+|+... +..
T Consensus 250 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~-~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~ 328 (429)
T PRK01742 250 NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTS-GAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA 328 (429)
T ss_pred cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeecc-CCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence 34689999999988764 67765555 666676555433 333445789999999877654 567777876532 211
Q ss_pred ccE----EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 88 SWV----LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 88 ~~v----~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
..+ ...+|+|+|++++..+.+ .+.+||+.++........ .....+.|+|||+.++.++.++...+|.+
T Consensus 329 ~~l~~~~~~~~~SpDG~~ia~~~~~-~i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 329 SLVGGRGYSAQISADGKTLVMINGD-NVVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred EEecCCCCCccCCCCCCEEEEEcCC-CEEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 000 346799999999888765 466699988764322221 23456789999999999998888777765
No 190
>KOG0321|consensus
Probab=99.49 E-value=4.6e-13 Score=106.18 Aligned_cols=146 Identities=16% Similarity=0.324 Sum_probs=109.8
Q ss_pred EEEEEcC---CCCEEEEEeCCCcEEEEeCCCCcEE------EEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy10953 15 WNVVFSP---DDKYVLSGSQSGKINLYGVETGKLE------QIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 15 ~~~~~s~---~g~~l~~~~~d~~i~~~d~~~~~~~------~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~- 84 (181)
+...|++ ....|+.+..||.|.++|.+..+.. ..+..|...+..+.|.|-...|++++.|.+++.||++.
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 5667765 3446789999999999998755443 33445667788999999556789999999999999863
Q ss_pred ---------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCc--------------------eee-------ee-e
Q psy10953 85 ---------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRE--------------------NMH-------TF-K 126 (181)
Q Consensus 85 ---------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~--------------------~~~-------~~-~ 126 (181)
+|...+.+++|.|... .|++|+.|+.|.|||++-.. ... .. .
T Consensus 133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA 212 (720)
T KOG0321|consen 133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA 212 (720)
T ss_pred eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence 5778888999999765 88899999999999986311 000 00 0
Q ss_pred cCCcEEE---EEEccCCCEEEEEcC-CCcEEEEeCCCC
Q psy10953 127 HADQVWC---VCVAPDGDKFVSVGE-DKAVHMYSYKPE 160 (181)
Q Consensus 127 ~~~~v~~---~~~sp~g~~l~~~~~-d~~v~i~~~~~~ 160 (181)
+...|.+ +.+..|...|++++. |+.|++||+..-
T Consensus 213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~ 250 (720)
T KOG0321|consen 213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKN 250 (720)
T ss_pred ccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccc
Confidence 1223444 677789999999887 999999999653
No 191
>KOG4328|consensus
Probab=99.49 E-value=1.5e-12 Score=99.82 Aligned_cols=151 Identities=16% Similarity=0.307 Sum_probs=117.1
Q ss_pred cCeeeEEEEEEcCCCC--EEEEEeCCCcEEEEeCCCCc----EEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEe
Q psy10953 9 VGPVDMWNVVFSPDDK--YVLSGSQSGKINLYGVETGK----LEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFD 81 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~--~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d 81 (181)
....-+++++|+|..+ ++++|...|.|-+||+.+.+ -..++..|+..+.++.|+|.. .++++.+.||++++-|
T Consensus 184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D 263 (498)
T KOG4328|consen 184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD 263 (498)
T ss_pred ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence 3445578999999665 67888889999999995322 234555677778899999965 6788999999999999
Q ss_pred CCCC----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce-eeeee-cCCcEEEEEEccCCC-EEEEEcC
Q psy10953 82 ANTG----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN-MHTFK-HADQVWCVCVAPDGD-KFVSVGE 148 (181)
Q Consensus 82 ~~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~-~~~~v~~~~~sp~g~-~l~~~~~ 148 (181)
++.. .......+.|+.+...++.+..=|...+||++++.. ...+. |...|.+++++|... +|+++|.
T Consensus 264 ~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~ 343 (498)
T KOG4328|consen 264 FEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASL 343 (498)
T ss_pred ecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeeccc
Confidence 8753 223456678888877777888777999999998654 33333 667899999999754 5899999
Q ss_pred CCcEEEEeCCC
Q psy10953 149 DKAVHMYSYKP 159 (181)
Q Consensus 149 d~~v~i~~~~~ 159 (181)
|++++|||++.
T Consensus 344 D~T~kIWD~R~ 354 (498)
T KOG4328|consen 344 DQTAKIWDLRQ 354 (498)
T ss_pred Ccceeeeehhh
Confidence 99999999853
No 192
>KOG2919|consensus
Probab=99.47 E-value=3.9e-12 Score=94.10 Aligned_cols=147 Identities=21% Similarity=0.343 Sum_probs=115.7
Q ss_pred EEEEEEc-------CCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC-----ceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 14 MWNVVFS-------PDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG-----KFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 14 ~~~~~~s-------~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+++..|- |+-.++++.+.+.-|++||.-+|++...+..-. ....+++|+|||.+|++| ..+.|+++|
T Consensus 107 vydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFd 185 (406)
T KOG2919|consen 107 VYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFD 185 (406)
T ss_pred EEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEee
Confidence 5555553 788899999999999999999999876655321 123489999999998865 466899999
Q ss_pred CC-CC---------------CcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEE
Q psy10953 82 AN-TG---------------HSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 82 ~~-~~---------------~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l 143 (181)
+. .+ ..+.+.+++|+|.. +.+++++....+-+|.-..+.++... .|.+.|+.++|.++|+.|
T Consensus 186 t~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~l 265 (406)
T KOG2919|consen 186 TSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKL 265 (406)
T ss_pred ccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCee
Confidence 83 22 13457788999965 58999998888888877766666555 488899999999999999
Q ss_pred EEEcC-CCcEEEEeCCCCe
Q psy10953 144 VSVGE-DKAVHMYSYKPEE 161 (181)
Q Consensus 144 ~~~~~-d~~v~i~~~~~~~ 161 (181)
++|+. +-.|.+||++...
T Consensus 266 fsGaRk~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 266 FSGARKDDKILCWDIRYSR 284 (406)
T ss_pred cccccCCCeEEEEeehhcc
Confidence 99996 7799999996543
No 193
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=1.4e-11 Score=98.09 Aligned_cols=152 Identities=16% Similarity=0.171 Sum_probs=102.3
Q ss_pred eEEEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CCc--EEEEeCCCCC
Q psy10953 13 DMWNVVFSPDDKYVL-SGSQSG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DGI--INIFDANTGH 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~-~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~--v~i~d~~~~~ 86 (181)
.....+|+|||+.++ +.+.++ .|.+||+.+++..++.. +.......+|+|||++|+..+. ++. ++++|+.++.
T Consensus 249 ~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~-~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~ 327 (433)
T PRK04922 249 INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTN-HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS 327 (433)
T ss_pred CccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECcc-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 345789999999876 445555 59999999888655433 2222346899999998887653 443 6667765442
Q ss_pred c-------ccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC---CcEE
Q psy10953 87 S-------SWVLSTAFTRDGKFFISASADH---TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED---KAVH 153 (181)
Q Consensus 87 ~-------~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d---~~v~ 153 (181)
. ......+|+|+|++++..+.++ .|++||+.++... .+.+........|+|||+.++..+.+ ..+.
T Consensus 328 ~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~ 406 (433)
T PRK04922 328 AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLA 406 (433)
T ss_pred eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEE
Confidence 2 2234679999999888765432 5999999877644 33333334567899999998777653 3577
Q ss_pred EEeCCCCeeEEEc
Q psy10953 154 MYSYKPEEEVEVN 166 (181)
Q Consensus 154 i~~~~~~~~~~~~ 166 (181)
+++...+....+.
T Consensus 407 ~~~~~g~~~~~l~ 419 (433)
T PRK04922 407 AVSTDGRVRQRLV 419 (433)
T ss_pred EEECCCCceEEcc
Confidence 7777655444443
No 194
>KOG2111|consensus
Probab=99.47 E-value=1.5e-11 Score=90.64 Aligned_cols=145 Identities=19% Similarity=0.370 Sum_probs=110.1
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEecCC--ceEEEEEECCCCCEEEE-eeCCCcEEEEeCCC----
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDTRG--KFTLSIAYSTDGHWIAS-GALDGIINIFDANT---- 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~---- 84 (181)
++.++.++++ ++++. ...+|.+|... +-+.++.+.... .-..+++...+...||. |-.-|.|.+-|+..
T Consensus 96 ~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~ 172 (346)
T KOG2111|consen 96 EIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN 172 (346)
T ss_pred ceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcC
Confidence 3566666554 44444 36799999887 445666665432 22334444445556666 55679999999853
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCc-EEEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHT-VRVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.|.+.|.+++++.+|..+||++..|+ |+|||..++..+.++. .+..|++++|||+..++++.|.-|++++
T Consensus 173 ~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHi 252 (346)
T KOG2111|consen 173 APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHI 252 (346)
T ss_pred CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEE
Confidence 36778899999999999999999887 8999999999998886 3457999999999999999999999999
Q ss_pred EeCCCC
Q psy10953 155 YSYKPE 160 (181)
Q Consensus 155 ~~~~~~ 160 (181)
+.+...
T Consensus 253 F~l~~~ 258 (346)
T KOG2111|consen 253 FSLRDT 258 (346)
T ss_pred EEeecC
Confidence 998653
No 195
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=1.8e-11 Score=97.85 Aligned_cols=158 Identities=19% Similarity=0.181 Sum_probs=102.1
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCc--EEEEe
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGI--INIFD 81 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~--v~i~d 81 (181)
..++..+....|||||++|+..+.+ ..|.++|+.+++...+....+. .....|+|||+.|+. .+.++. ++++|
T Consensus 214 ~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~-~~~~~wSPDG~~La~~~~~~g~~~Iy~~d 292 (448)
T PRK04792 214 LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGI-NGAPRFSPDGKKLALVLSKDGQPEIYVVD 292 (448)
T ss_pred ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCC-cCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence 3344456688999999999876543 2588889988876544332222 236899999998875 455664 77778
Q ss_pred CCCCC-------cccEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC-C
Q psy10953 82 ANTGH-------SSWVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED-K 150 (181)
Q Consensus 82 ~~~~~-------~~~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~ 150 (181)
+.++. .......+|+|||+.++..+. ++ .|+++|+.+++..............+|+|||++++..+.+ +
T Consensus 293 l~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g 372 (448)
T PRK04792 293 IATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNG 372 (448)
T ss_pred CCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCC
Confidence 76542 223456789999997766553 33 4777787766533221122223457899999998877653 3
Q ss_pred --cEEEEeCCCCeeEEEc
Q psy10953 151 --AVHMYSYKPEEEVEVN 166 (181)
Q Consensus 151 --~v~i~~~~~~~~~~~~ 166 (181)
.|.++++.++....+.
T Consensus 373 ~~~I~~~dl~~g~~~~lt 390 (448)
T PRK04792 373 KFNIARQDLETGAMQVLT 390 (448)
T ss_pred ceEEEEEECCCCCeEEcc
Confidence 4555677666544433
No 196
>KOG0307|consensus
Probab=99.47 E-value=2.8e-13 Score=113.07 Aligned_cols=145 Identities=17% Similarity=0.290 Sum_probs=110.9
Q ss_pred EEEEEEcCCCCE----EEEEeCCCcEEEEeCCC---CcE---EEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEEEeC
Q psy10953 14 MWNVVFSPDDKY----VLSGSQSGKINLYGVET---GKL---EQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINIFDA 82 (181)
Q Consensus 14 ~~~~~~s~~g~~----l~~~~~d~~i~~~d~~~---~~~---~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d~ 82 (181)
...++|.+.|.. |+.|..||.|.+||... +.- +.....|...|..+.|++.+. +|++|+.||.|.+||+
T Consensus 67 F~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDl 146 (1049)
T KOG0307|consen 67 FNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDL 146 (1049)
T ss_pred ceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEecc
Confidence 578999998887 88999999999999754 222 233445667788999999765 9999999999999999
Q ss_pred CCCC----------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeeecC---CcEEEEEEccCCC-EEEEEc
Q psy10953 83 NTGH----------SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFKHA---DQVWCVCVAPDGD-KFVSVG 147 (181)
Q Consensus 83 ~~~~----------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~v~~~~~sp~g~-~l~~~~ 147 (181)
++.. ...|.+++|+..-+ .|++++.++.+.|||++..+.+..+... ..+..++|+|++. .+++++
T Consensus 147 nn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As 226 (1049)
T KOG0307|consen 147 NKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVAS 226 (1049)
T ss_pred CCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeec
Confidence 7532 23578889988654 6778888999999999988776666422 3477899999865 466666
Q ss_pred CCC---cEEEEeCC
Q psy10953 148 EDK---AVHMYSYK 158 (181)
Q Consensus 148 ~d~---~v~i~~~~ 158 (181)
.|. .|.+||++
T Consensus 227 ~dd~~PviqlWDlR 240 (1049)
T KOG0307|consen 227 GDDSAPVIQLWDLR 240 (1049)
T ss_pred CCCCCceeEeeccc
Confidence 543 58999964
No 197
>KOG1310|consensus
Probab=99.47 E-value=4.8e-13 Score=104.80 Aligned_cols=151 Identities=21% Similarity=0.287 Sum_probs=118.5
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCC--CCEEEEeeCCCcEEEEeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTD--GHWIASGALDGIINIFDAN 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d--~~~l~~~~~d~~v~i~d~~ 83 (181)
++.+..=|.+++|+.||.+|++|++|..+.+||.-..|+++.+.. |..-+.++.|-|. .+.+++|+.|..|+++|+.
T Consensus 46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~ 125 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD 125 (758)
T ss_pred hccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence 455666688999999999999999999999999988888877764 5556788999884 5778899999999999986
Q ss_pred C------------------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCce-------eeee-e-c--CCcEEE
Q psy10953 84 T------------------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARREN-------MHTF-K-H--ADQVWC 133 (181)
Q Consensus 84 ~------------------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~-------~~~~-~-~--~~~v~~ 133 (181)
. .|...|-.++-.|++ ..+-+++.||+++-+|++.... .... . + --...+
T Consensus 126 ~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ 205 (758)
T KOG1310|consen 126 SSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKC 205 (758)
T ss_pred cccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeee
Confidence 3 244556677888988 7888999999999999987321 0000 0 1 124568
Q ss_pred EEEccCC-CEEEEEcCCCcEEEEeC
Q psy10953 134 VCVAPDG-DKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 134 ~~~sp~g-~~l~~~~~d~~v~i~~~ 157 (181)
+.++|.. .+|++|+.|-.+++||.
T Consensus 206 ltisp~rp~~laVGgsdpfarLYD~ 230 (758)
T KOG1310|consen 206 LTISPSRPYYLAVGGSDPFARLYDR 230 (758)
T ss_pred eeecCCCCceEEecCCCchhhhhhh
Confidence 8999964 56788888999999994
No 198
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.47 E-value=1.2e-10 Score=90.74 Aligned_cols=165 Identities=21% Similarity=0.332 Sum_probs=113.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee-CCCcEEEEeC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA-LDGIINIFDA 82 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-~d~~v~i~d~ 82 (181)
+.++...-..+..+.|+|||+++++++.|+.|.++|+.+++.+..+..... ..++++|+||++++++. ..+.+.++|.
T Consensus 29 ~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~ 107 (369)
T PF02239_consen 29 VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDA 107 (369)
T ss_dssp EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEecc
Confidence 444544322256788999999999999999999999999999888776444 46899999999998775 5889999998
Q ss_pred CCCC---------------cccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCcee--eeeecCCcEEEEEEccCCCEEE
Q psy10953 83 NTGH---------------SSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARRENM--HTFKHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 83 ~~~~---------------~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~--~~~~~~~~v~~~~~sp~g~~l~ 144 (181)
++.+ .+.+.++..+|.+..++..- ..+.|-+.|....+.+ ..+..........|+|++++++
T Consensus 108 ~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~ 187 (369)
T PF02239_consen 108 ETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFL 187 (369)
T ss_dssp TT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEE
T ss_pred ccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceee
Confidence 6532 23566777788887555544 4588888898765433 2334455678899999999977
Q ss_pred EEc-CCCcEEEEeCCCCeeEEEcCCC
Q psy10953 145 SVG-EDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 145 ~~~-~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
++. .++.|.++|.+++..+....-|
T Consensus 188 va~~~sn~i~viD~~~~k~v~~i~~g 213 (369)
T PF02239_consen 188 VAANGSNKIAVIDTKTGKLVALIDTG 213 (369)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEE-S
T ss_pred ecccccceeEEEeeccceEEEEeecc
Confidence 654 5679999999988777654443
No 199
>KOG4378|consensus
Probab=99.46 E-value=4.1e-13 Score=104.03 Aligned_cols=144 Identities=21% Similarity=0.382 Sum_probs=117.3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC---------
Q psy10953 16 NVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH--------- 86 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--------- 86 (181)
|++......++++|+..++|++||++...+.+.+..|...+.++.+.-...+|++++..|.+.+..+.++.
T Consensus 84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s 163 (673)
T KOG4378|consen 84 CVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS 163 (673)
T ss_pred HHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC
Confidence 33333444889999999999999999655556666777888899998888999999999999999886532
Q ss_pred cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCC-EEEEEcCCCcEEEEeCCC
Q psy10953 87 SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGD-KFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 87 ~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~-~l~~~~~d~~v~i~~~~~ 159 (181)
...|+.+.|+|..+ +|.+++.+|.|.+||.....+...+. |..+..++||+|.+. .|++.+.|+.|.+||...
T Consensus 164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred CCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc
Confidence 23567899999877 66778899999999998887776663 777888999999765 578899999999999864
No 200
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=2.2e-11 Score=96.68 Aligned_cols=158 Identities=18% Similarity=0.165 Sum_probs=100.5
Q ss_pred eeeEEEEEEcCCCCEEEEEeC-----CCcEEEEeCCC---CcEEEEEecCCceEEEEEECCCCCEEEEee-CCCcEEEE-
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQ-----SGKINLYGVET---GKLEQIFDTRGKFTLSIAYSTDGHWIASGA-LDGIINIF- 80 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~-----d~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-~d~~v~i~- 80 (181)
+......+|||||++|+..+. +..+..|++.. ++..++...........+|+|||+.|+..+ .++...+|
T Consensus 230 ~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~ 309 (428)
T PRK01029 230 QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYI 309 (428)
T ss_pred CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 334456889999999886543 22344467664 333344332222224679999999888765 45644444
Q ss_pred -eCCC--C-------CcccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc
Q psy10953 81 -DANT--G-------HSSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 81 -d~~~--~-------~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
++.. + ....+....|+|||+.|+..+.+ ..|++||+.+++..........+....|+|||+.|+..+
T Consensus 310 ~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~ 389 (428)
T PRK01029 310 MQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSA 389 (428)
T ss_pred EECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEE
Confidence 4431 1 12345678999999988876543 469999998876543332333567789999999887544
Q ss_pred C---CCcEEEEeCCCCeeEEEcCC
Q psy10953 148 E---DKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 148 ~---d~~v~i~~~~~~~~~~~~~~ 168 (181)
. ...++++++..+....+..+
T Consensus 390 ~~~g~~~L~~vdl~~g~~~~Lt~~ 413 (428)
T PRK01029 390 GNSNESELYLISLITKKTRKIVIG 413 (428)
T ss_pred CCCCCceEEEEECCCCCEEEeecC
Confidence 3 34688888887766555443
No 201
>KOG1538|consensus
Probab=99.45 E-value=7.6e-12 Score=100.31 Aligned_cols=154 Identities=18% Similarity=0.348 Sum_probs=112.2
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CcE-------EEEEecC----------------------
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET-GKL-------EQIFDTR---------------------- 52 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~-~~~-------~~~~~~~---------------------- 52 (181)
.++.+-.+...|++++|+.||+++++|+.|+.+.+|.-+- |-+ ++.....
T Consensus 45 llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK 124 (1081)
T KOG1538|consen 45 LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQK 124 (1081)
T ss_pred cccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhh
Confidence 4667778888899999999999999999999999997542 211 1111000
Q ss_pred -------CceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----------CCccc--------------------------
Q psy10953 53 -------GKFTLSIAYSTDGHWIASGALDGIINIFDANT----------GHSSW-------------------------- 89 (181)
Q Consensus 53 -------~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----------~~~~~-------------------------- 89 (181)
...+.+.+|..||++|+.|..||++.+-+... +.+..
T Consensus 125 ~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qT 204 (1081)
T KOG1538|consen 125 SVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQT 204 (1081)
T ss_pred hHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccce
Confidence 12345788999999999999999999986421 11111
Q ss_pred --------------------EEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcC
Q psy10953 90 --------------------VLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 90 --------------------v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
..++++.++|.+++.|+.|+.+++| .+.+-.+.+.. ....||++...|+++.++.|+.
T Consensus 205 LSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~f-TR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCq 283 (1081)
T KOG1538|consen 205 LSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLF-TRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQ 283 (1081)
T ss_pred eEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEE-eecCeEEeeccccceeEEEEEEccCCceEEEEEc
Confidence 2245666777877888888888877 34444444443 3347999999999999999999
Q ss_pred CCcEEEEeC
Q psy10953 149 DKAVHMYSY 157 (181)
Q Consensus 149 d~~v~i~~~ 157 (181)
||+|..|++
T Consensus 284 DGTiACyNl 292 (1081)
T KOG1538|consen 284 DGTIACYNL 292 (1081)
T ss_pred cCeeehhhh
Confidence 999999997
No 202
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.44 E-value=1.4e-10 Score=89.35 Aligned_cols=158 Identities=28% Similarity=0.535 Sum_probs=122.9
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-EEEEEec-CCceEEEEEE-CCCCC-EEEEeeC-CCcEEEEe
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK-LEQIFDT-RGKFTLSIAY-STDGH-WIASGAL-DGIINIFD 81 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-~~~~~~~-~~~~~~~~~~-s~d~~-~l~~~~~-d~~v~i~d 81 (181)
.......+..+.+.+.+..++.++.|+.+.+|+...+. ....+.. +...+....+ ++++. .++..+. |+.+.+|+
T Consensus 61 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 140 (466)
T COG2319 61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWD 140 (466)
T ss_pred eeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEE
Confidence 34566668899999999999999999999999998776 4444444 2223344555 88887 4554444 99999999
Q ss_pred CCC---------CCcccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCceeeeee-cCCcEEEEEEccCCC-EEEEEcCC
Q psy10953 82 ANT---------GHSSWVLSTAFTRDGKFFISASA-DHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGD-KFVSVGED 149 (181)
Q Consensus 82 ~~~---------~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~-~l~~~~~d 149 (181)
... .|...+..++|+|+++++++++. ++.+++|+......+..+. |...+.+++++|++. .+++++.|
T Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 220 (466)
T COG2319 141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSD 220 (466)
T ss_pred ecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCC
Confidence 874 35667889999999998888885 9999999999866666665 678899999999998 55555889
Q ss_pred CcEEEEeCCCCeeEE
Q psy10953 150 KAVHMYSYKPEEEVE 164 (181)
Q Consensus 150 ~~v~i~~~~~~~~~~ 164 (181)
+.+++|+...+..+.
T Consensus 221 ~~i~~wd~~~~~~~~ 235 (466)
T COG2319 221 GTIRLWDLSTGKLLR 235 (466)
T ss_pred CcEEEEECCCCcEEe
Confidence 999999887666555
No 203
>KOG3881|consensus
Probab=99.44 E-value=9.8e-12 Score=93.74 Aligned_cols=153 Identities=18% Similarity=0.334 Sum_probs=119.6
Q ss_pred eeeeccCeeeEEEEEEcCCCCE-EEEEeCC--CcEEEEeCCCCcEEEEEecCC-----------ceEEEEEECCC--CCE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKY-VLSGSQS--GKINLYGVETGKLEQIFDTRG-----------KFTLSIAYSTD--GHW 67 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~-l~~~~~d--~~i~~~d~~~~~~~~~~~~~~-----------~~~~~~~~s~d--~~~ 67 (181)
+..++.++. +..+.-+|.... +++|+.. ..+++||++..+ ++++... .+..++.|-+. ...
T Consensus 142 l~~la~g~g-~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~--qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~ 218 (412)
T KOG3881|consen 142 LIKLATGPG-LYDVRQTDTDPYIVATGGKENINELKIWDLEQSK--QIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYK 218 (412)
T ss_pred ceeeecCCc-eeeeccCCCCCceEecCchhcccceeeeecccce--eeeeccCCCCccccceeeeeeccceecCCCCCce
Confidence 344444433 456666665555 4568877 789999998774 4554431 23446777776 788
Q ss_pred EEEeeCCCcEEEEeCCCC---------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-ee-cCCcEEEEEE
Q psy10953 68 IASGALDGIINIFDANTG---------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT-FK-HADQVWCVCV 136 (181)
Q Consensus 68 l~~~~~d~~v~i~d~~~~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~-~~~~v~~~~~ 136 (181)
|+++..-+.+++||.+.+ ....+.+++..|.|+++.++...+.+..||++.++.... +. ..+.+.++-.
T Consensus 219 fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~ 298 (412)
T KOG3881|consen 219 FATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHC 298 (412)
T ss_pred EEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEE
Confidence 999999999999999743 235678899999999999999999999999999886655 43 5678999999
Q ss_pred ccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 137 APDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 137 sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+|.+.+++++|.|+.|+|+|.++
T Consensus 299 hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 299 HPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred cCCCceEEeeccceeEEEeeccc
Confidence 99999999999999999999977
No 204
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=3.1e-11 Score=96.20 Aligned_cols=158 Identities=18% Similarity=0.200 Sum_probs=105.0
Q ss_pred eccCeeeEEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-C--CcEEEE
Q psy10953 7 INVGPVDMWNVVFSPDDKYVL-SGSQSGK--INLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-D--GIINIF 80 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~-~~~~d~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d--~~v~i~ 80 (181)
+...+..+...+|||||+.|+ +.+.++. |.+||+.+++..++.. +........|+|||+.|+..+. + ..++++
T Consensus 241 l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~-~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~ 319 (435)
T PRK05137 241 VGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTD-SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVM 319 (435)
T ss_pred eecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccC-CCCccCceeEcCCCCEEEEEECCCCCCeEEEE
Confidence 333444456789999999876 4555554 7777998887755433 3333446899999999887653 3 368888
Q ss_pred eCCCCC-------cccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC-
Q psy10953 81 DANTGH-------SSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED- 149 (181)
Q Consensus 81 d~~~~~-------~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d- 149 (181)
|+..+. ...+....|+|+|+.++....+ ..|.+||+..+. ...+.....+....|+|||+.++..+.+
T Consensus 320 d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~~~~~~p~~spDG~~i~~~~~~~ 398 (435)
T PRK05137 320 NADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSGFLVEGPTWAPNGRVIMFFRQTP 398 (435)
T ss_pred ECCCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCCCCCCCCeECCCCCEEEEEEccC
Confidence 876542 2234557899999988876643 358888875543 2333333346678999999998765542
Q ss_pred -----CcEEEEeCCCCeeEEEc
Q psy10953 150 -----KAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 150 -----~~v~i~~~~~~~~~~~~ 166 (181)
..++++++..+....+.
T Consensus 399 ~~~~~~~L~~~dl~g~~~~~l~ 420 (435)
T PRK05137 399 GSGGAPKLYTVDLTGRNEREVP 420 (435)
T ss_pred CCCCcceEEEEECCCCceEEcc
Confidence 25777787665554443
No 205
>KOG0644|consensus
Probab=99.43 E-value=1.1e-13 Score=112.75 Aligned_cols=113 Identities=23% Similarity=0.413 Sum_probs=102.4
Q ss_pred CcceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 1 MKQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
|+.|.++..+...|+|+.|...|.++++|++|..+++|.++++.++.....|...+..++.+.....++++++|..|++|
T Consensus 180 mk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvW 259 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVW 259 (1113)
T ss_pred HHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEE
Confidence 56778888899889999999999999999999999999999999988888888878889999888889999999999999
Q ss_pred eCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy10953 81 DANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFA 117 (181)
Q Consensus 81 d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 117 (181)
.+.. +|++.|++++|+|-. +.+.||++++||.+
T Consensus 260 rl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 260 RLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred ecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 9864 689999999999974 67889999999986
No 206
>KOG1524|consensus
Probab=99.42 E-value=1.6e-12 Score=101.65 Aligned_cols=129 Identities=16% Similarity=0.254 Sum_probs=93.9
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC-----
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN----- 83 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~----- 83 (181)
.+...+.+-.|+|||.-|++++.||.|++|. ++|.+...+.-.+..++|++|.|+.+.++....+ .+++=-+.
T Consensus 102 AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~-h~~IKpL~~n~k~ 179 (737)
T KOG1524|consen 102 AHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGG-HISIKPLAANSKI 179 (737)
T ss_pred hhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecCC-eEEEeecccccce
Confidence 3555567788999999999999999999996 5666554444456778999999998766554332 33333322
Q ss_pred ---CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccC
Q psy10953 84 ---TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPD 139 (181)
Q Consensus 84 ---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~ 139 (181)
..|.+-|.++.|++..+.+++|+.|-.-++||......+.+..|..+|++++|.|+
T Consensus 180 i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 180 IRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred eEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccc
Confidence 35888899999999999999999999999999765444444444445555555555
No 207
>KOG4227|consensus
Probab=99.41 E-value=1.4e-11 Score=93.41 Aligned_cols=146 Identities=14% Similarity=0.195 Sum_probs=117.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCC------CCcEEEEEecCC-ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVE------TGKLEQIFDTRG-KFTLSIAYSTDGHWIASGALDGIINIFDANTGH 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~------~~~~~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~ 86 (181)
+..+.||.++++|++|++|..+++|.+. +.+.+++...+. ..+.+++|......+++|..+++|.+-|+++..
T Consensus 59 iNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~q 138 (609)
T KOG4227|consen 59 INALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQ 138 (609)
T ss_pred cceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccce
Confidence 4678999999999999999999999873 345566555433 567899999988999999999999999997642
Q ss_pred ----------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc----eeeeeecCCcEEEEEEccCC-CEEEEEcCCCc
Q psy10953 87 ----------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRE----NMHTFKHADQVWCVCVAPDG-DKFVSVGEDKA 151 (181)
Q Consensus 87 ----------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~~~v~~~~~sp~g-~~l~~~~~d~~ 151 (181)
.+.|..+..+|-.+.|++.+.++.|.+||.+... +++.-..+...+++.|+|.. ..|++.+.-+.
T Consensus 139 si~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G 218 (609)
T KOG4227|consen 139 SIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGG 218 (609)
T ss_pred eeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCC
Confidence 2468889999999999999999999999998654 33333466778999999975 45677777789
Q ss_pred EEEEeCCC
Q psy10953 152 VHMYSYKP 159 (181)
Q Consensus 152 v~i~~~~~ 159 (181)
+.+|++..
T Consensus 219 ~~~~D~R~ 226 (609)
T KOG4227|consen 219 PNVFDRRM 226 (609)
T ss_pred CCceeecc
Confidence 99999864
No 208
>KOG0642|consensus
Probab=99.40 E-value=6.8e-12 Score=98.33 Aligned_cols=150 Identities=21% Similarity=0.400 Sum_probs=115.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCC------C--cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVET------G--KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN-- 83 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~------~--~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~-- 83 (181)
+..++|+|-...|++++.|+++++|+++. . +.+..|..|...+.|+++++.++++++|+-||.|+.|++.
T Consensus 297 ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n 376 (577)
T KOG0642|consen 297 IRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPN 376 (577)
T ss_pred hhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCC
Confidence 45677888889999999999999999922 1 2334566777788899999999999999999999999542
Q ss_pred ----------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce--------------------------
Q psy10953 84 ----------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN-------------------------- 121 (181)
Q Consensus 84 ----------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-------------------------- 121 (181)
.||...+..+++|+....|++++.||+++.|+.....+
T Consensus 377 ~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~ 456 (577)
T KOG0642|consen 377 QDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSL 456 (577)
T ss_pred CCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhh
Confidence 26778889999999999999999999999998643221
Q ss_pred ------------------eeeee--------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 122 ------------------MHTFK--------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 122 ------------------~~~~~--------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
+..+. ....++-+..+|.+.+.+++..|+.|++++..++..+
T Consensus 457 ~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l 524 (577)
T KOG0642|consen 457 ASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKIL 524 (577)
T ss_pred hhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccc
Confidence 00000 0012445666788888888889999999999887654
No 209
>KOG1539|consensus
Probab=99.40 E-value=2.6e-11 Score=98.93 Aligned_cols=136 Identities=21% Similarity=0.385 Sum_probs=119.5
Q ss_pred EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-------C-cccEEEEEEc
Q psy10953 25 YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG-------H-SSWVLSTAFT 96 (181)
Q Consensus 25 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~-------~-~~~v~~~~~s 96 (181)
.++.|+.+|.+++|++++++.+..++.....+.++.-+|.-..++.|..+|.|.+++++.+ + -+.|+.++|.
T Consensus 174 KIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFr 253 (910)
T KOG1539|consen 174 KIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFR 253 (910)
T ss_pred eEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEec
Confidence 4678999999999999999999999988888888888998899999999999999999865 3 3789999999
Q ss_pred CCCC-EEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 97 RDGK-FFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 97 ~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
-||. .+++++..|.+.+||+...+.+.... |.+.+..+-|-|..-.+++.+.|+.+++|-.+++
T Consensus 254 tDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~ 320 (910)
T KOG1539|consen 254 TDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSG 320 (910)
T ss_pred cCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCC
Confidence 9998 67788888999999999988777765 6678889999999999999999999888877643
No 210
>KOG1963|consensus
Probab=99.40 E-value=3.4e-11 Score=98.47 Aligned_cols=161 Identities=18% Similarity=0.327 Sum_probs=124.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCC--C-c-EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc--
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVET--G-K-LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS-- 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~--~-~-~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~-- 87 (181)
..+.++||+++++|+|..||.|.+|.--. + + ..+.+.-|...+.+++|+++|.+|++|+..+.+.+|.+.+++.
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqf 287 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQF 287 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCccc
Confidence 56789999999999999999999995322 1 1 1244555666788999999999999999999999999987763
Q ss_pred -----ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee------------cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 88 -----SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK------------HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 88 -----~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~------------~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
+.|..+.+|||+.+.+....|..|.+....+.....++. ..+-...++++|.-+.++-.+..+
T Consensus 288 LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g 367 (792)
T KOG1963|consen 288 LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPG 367 (792)
T ss_pred ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCc
Confidence 468999999999999999999999998765432222221 123356789999888888899999
Q ss_pred cEEEEeCCCCee---EEEcCCCCcchh
Q psy10953 151 AVHMYSYKPEEE---VEVNGGGGEEEE 174 (181)
Q Consensus 151 ~v~i~~~~~~~~---~~~~~~~~~~~~ 174 (181)
.|++||+.+... +.+...+..+++
T Consensus 368 ~vQ~ydl~td~~i~~~~v~~~n~~~~~ 394 (792)
T KOG1963|consen 368 HVQFYDLYTDSTIYKLQVCDENYSDGD 394 (792)
T ss_pred eEEEEeccccceeeeEEEEeecccCCc
Confidence 999999977643 445555555444
No 211
>KOG2110|consensus
Probab=99.39 E-value=1.5e-10 Score=86.93 Aligned_cols=159 Identities=18% Similarity=0.309 Sum_probs=114.1
Q ss_pred CcceeeeccC---eeeEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC
Q psy10953 1 MKQISKINVG---PVDMWNVVFSPDDKYVLSGS--QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG 75 (181)
Q Consensus 1 ~~~~~~~~~~---~~~~~~~~~s~~g~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~ 75 (181)
|+.|-.+... +..+..+++++.+.+++.=+ ..|.|.+||+.+-+....+..|...+.+++|+++|.+||+++..|
T Consensus 116 MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKG 195 (391)
T KOG2110|consen 116 MKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKG 195 (391)
T ss_pred ceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCc
Confidence 4444444443 44455556666667888532 358899999998888888888888888999999999999999888
Q ss_pred c-EEEEeCCCCCc----------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc------------------------
Q psy10953 76 I-INIFDANTGHS----------SWVLSTAFTRDGKFFISASADHTVRVWNFARRE------------------------ 120 (181)
Q Consensus 76 ~-v~i~d~~~~~~----------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~------------------------ 120 (181)
+ |+++.+..++. ..|.+++|+|++++|.+.+..++|++|-+....
T Consensus 196 TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sy 275 (391)
T KOG2110|consen 196 TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSY 275 (391)
T ss_pred eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhh
Confidence 5 56888866542 357889999999999999999999999764210
Q ss_pred -------------eeeeee--cCCcEEEEEEc--cCCCEEEEEcCCCcEEEEeCCC
Q psy10953 121 -------------NMHTFK--HADQVWCVCVA--PDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 121 -------------~~~~~~--~~~~v~~~~~s--p~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.+...+ ..+.-..+.++ +...++..++.||.++.|.+..
T Consensus 276 lps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~ 331 (391)
T KOG2110|consen 276 LPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPP 331 (391)
T ss_pred cchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCC
Confidence 000001 01111223344 4677888899999999999865
No 212
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.39 E-value=9e-11 Score=93.33 Aligned_cols=147 Identities=18% Similarity=0.225 Sum_probs=94.5
Q ss_pred eeeEEEEEEcCCCCEEE-EEeCCCcEEEE--eCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEe--CCC
Q psy10953 11 PVDMWNVVFSPDDKYVL-SGSQSGKINLY--GVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFD--ANT 84 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~-~~~~d~~i~~~--d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d--~~~ 84 (181)
+......+|||||+.|+ +.+.++...+| |+.++...++.. +........|+|||++|+..+. ++...+|. +..
T Consensus 239 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~-~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~ 317 (427)
T PRK02889 239 KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQ-SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG 317 (427)
T ss_pred CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCC-CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence 33456789999999886 56777776665 455555444322 2222346789999998886553 45555554 433
Q ss_pred CCc-------ccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCC---c
Q psy10953 85 GHS-------SWVLSTAFTRDGKFFISASADH---TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDK---A 151 (181)
Q Consensus 85 ~~~-------~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~---~ 151 (181)
+.. ......+|+|+|++++..+.++ .|++||+.+++.. .+.........+|+|||+.|+..+.++ .
T Consensus 318 g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~ 396 (427)
T PRK02889 318 GAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTDTTRDESPSFAPNGRYILYATQQGGRSV 396 (427)
T ss_pred CceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccCCCCccCceECCCCCEEEEEEecCCCEE
Confidence 221 1234578999999988776554 5999999876543 222223346789999999988877543 3
Q ss_pred EEEEeCCC
Q psy10953 152 VHMYSYKP 159 (181)
Q Consensus 152 v~i~~~~~ 159 (181)
+.+.+...
T Consensus 397 l~~~~~~g 404 (427)
T PRK02889 397 LAAVSSDG 404 (427)
T ss_pred EEEEECCC
Confidence 55555533
No 213
>KOG4497|consensus
Probab=99.39 E-value=3.5e-11 Score=89.40 Aligned_cols=125 Identities=19% Similarity=0.215 Sum_probs=81.3
Q ss_pred CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCCc-------ccEEEEEEcCCCCEEE
Q psy10953 32 SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANTGHS-------SWVLSTAFTRDGKFFI 103 (181)
Q Consensus 32 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~~-------~~v~~~~~s~~~~~l~ 103 (181)
|+.|.+|++..-+..-.++.......+.+|||||+.+.. ...+-.+.+|.+.+... ..+...+|+|+|++.+
T Consensus 70 ~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~a 149 (447)
T KOG4497|consen 70 DPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCA 149 (447)
T ss_pred cceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceee
Confidence 445666666555544444444444567899999977665 66789999999976421 2246678999999876
Q ss_pred EEeCC-C-----------------------------------cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc
Q psy10953 104 SASAD-H-----------------------------------TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 104 ~~~~d-~-----------------------------------~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
-++.. . .+.+||.--...+..+...-.+-.++++|.+++++.|+
T Consensus 150 i~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGs 229 (447)
T KOG4497|consen 150 ILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGS 229 (447)
T ss_pred eeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeec
Confidence 55532 1 23333322222222222334577889999999999999
Q ss_pred CCCcEEEEe
Q psy10953 148 EDKAVHMYS 156 (181)
Q Consensus 148 ~d~~v~i~~ 156 (181)
.|+.+++-+
T Consensus 230 yD~~lrvln 238 (447)
T KOG4497|consen 230 YDQMLRVLN 238 (447)
T ss_pred cchhhhhhc
Confidence 999988755
No 214
>KOG2139|consensus
Probab=99.38 E-value=2.3e-11 Score=91.26 Aligned_cols=146 Identities=12% Similarity=0.192 Sum_probs=113.1
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
.+.++..++|++.-.-++++..|..|++||-.. +....+. .....+.+++|-|-+..-++.+..+-+.+|....
T Consensus 97 s~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~ 175 (445)
T KOG2139|consen 97 SEIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNA 175 (445)
T ss_pred hhcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCccccc
Confidence 566778899999766778999999999998766 3333333 3455678999999775544444455688997531
Q ss_pred -----------------CCcccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEE
Q psy10953 85 -----------------GHSSWVLSTAFTRDGKFFISASA-DHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 85 -----------------~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~ 145 (181)
.-..+|+.++|.+||..+++++. +..|.+||..++..+.... ..+.+.-+.|||||.+|++
T Consensus 176 ~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfa 255 (445)
T KOG2139|consen 176 NRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFA 255 (445)
T ss_pred ccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEE
Confidence 01257899999999999999985 5789999999887665553 4567888999999999999
Q ss_pred EcCCCcEEEEe
Q psy10953 146 VGEDKAVHMYS 156 (181)
Q Consensus 146 ~~~d~~v~i~~ 156 (181)
+..|+..++|+
T Consensus 256 At~davfrlw~ 266 (445)
T KOG2139|consen 256 ATCDAVFRLWQ 266 (445)
T ss_pred ecccceeeeeh
Confidence 99999999995
No 215
>KOG2321|consensus
Probab=99.38 E-value=1.3e-11 Score=97.24 Aligned_cols=155 Identities=13% Similarity=0.294 Sum_probs=124.5
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-----------CceEEEEEECCCCCEEEEee
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-----------GKFTLSIAYSTDGHWIASGA 72 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~s~d~~~l~~~~ 72 (181)
|+.+......+++|.+++-..+|++|+.+|.+.+||-++......+... ...+.++.|+.+|-.+++|.
T Consensus 168 L~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGt 247 (703)
T KOG2321|consen 168 LNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGT 247 (703)
T ss_pred ccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeec
Confidence 3445556566899999999999999999999999999877665544421 12366899999999999999
Q ss_pred CCCcEEEEeCCCC---------CcccEEEEEEcCCC--CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCC
Q psy10953 73 LDGIINIFDANTG---------HSSWVLSTAFTRDG--KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGD 141 (181)
Q Consensus 73 ~d~~v~i~d~~~~---------~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~ 141 (181)
.+|.+.+||++.. ...+|..+.|.+.+ ..+++. ....++|||-.+++.+..+.....++.+|+-|++.
T Consensus 248 s~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sG 326 (703)
T KOG2321|consen 248 STGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSG 326 (703)
T ss_pred cCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeecCCc
Confidence 9999999999743 23467888888763 345443 35689999999999999998888899999999999
Q ss_pred EEEEEcCCCcEEEEeCCC
Q psy10953 142 KFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~ 159 (181)
+++++-.+..+..|-+..
T Consensus 327 m~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 327 MFFTANESSKMHTYYIPS 344 (703)
T ss_pred eEEEecCCCcceeEEccc
Confidence 999999888888777653
No 216
>KOG0270|consensus
Probab=99.37 E-value=3.6e-11 Score=91.98 Aligned_cols=159 Identities=18% Similarity=0.313 Sum_probs=114.7
Q ss_pred eeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-cEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEEe
Q psy10953 5 SKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETG-KLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIFD 81 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d 81 (181)
+.+..+..+|.+++|+| ..+.|++|+.|+++.+.|.+.- ..-..+...+. +..+.|.|.. ..++++..||+|+.+|
T Consensus 280 ~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~-VEkv~w~~~se~~f~~~tddG~v~~~D 358 (463)
T KOG0270|consen 280 SSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGE-VEKVAWDPHSENSFFVSTDDGTVYYFD 358 (463)
T ss_pred eehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccc-eEEEEecCCCceeEEEecCCceEEeee
Confidence 44556777889999998 4667899999999999999842 22223333333 5678898865 4577788999999999
Q ss_pred CCC---------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeeec---CCcEEEEEEccCCCE-EEEEc
Q psy10953 82 ANT---------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFKH---ADQVWCVCVAPDGDK-FVSVG 147 (181)
Q Consensus 82 ~~~---------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~v~~~~~sp~g~~-l~~~~ 147 (181)
++. .|...|.++.+++.- .++++++.|+.+++|++.....-....| -+...|.++.|+--+ ++.|+
T Consensus 359 ~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG 438 (463)
T KOG0270|consen 359 IRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGG 438 (463)
T ss_pred cCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecC
Confidence 985 367788888888864 4889999999999999876543322222 234556666776555 56666
Q ss_pred CCCcEEEEeCCCCeeEE
Q psy10953 148 EDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 148 ~d~~v~i~~~~~~~~~~ 164 (181)
..+.+++|++.+...++
T Consensus 439 ~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 439 EKAVLRVWDIFTNSPVR 455 (463)
T ss_pred ccceEEEeecccChhHH
Confidence 66779999998765543
No 217
>KOG1272|consensus
Probab=99.34 E-value=1.5e-11 Score=94.74 Aligned_cols=155 Identities=14% Similarity=0.235 Sum_probs=118.2
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc----------------------------------
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK---------------------------------- 54 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---------------------------------- 54 (181)
..+...+.+.++.+|++|+.|+..|++-.+|..+.++...+.....
T Consensus 127 l~eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHCl 206 (545)
T KOG1272|consen 127 LPEFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCL 206 (545)
T ss_pred ccccCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeeh
Confidence 3445567889999999999999999999999988877554432110
Q ss_pred ----eEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC--------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee
Q psy10953 55 ----FTLSIAYSTDGHWIASGALDGIINIFDANTGH--------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM 122 (181)
Q Consensus 55 ----~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 122 (181)
.+..+.|-|-.-+|++++..|.++.-|+.+|. .+.+..+.-+|-+-.+-.|...|+|.+|.....+++
T Consensus 207 k~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePL 286 (545)
T KOG1272|consen 207 KRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPL 286 (545)
T ss_pred hhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchH
Confidence 11134444545566777888888888876553 234555666787778888889999999999888877
Q ss_pred eeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 123 HTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 123 ~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
..+. |.++|.++++.++|+++++.+.|+.++|||++...++
T Consensus 287 vKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql 328 (545)
T KOG1272|consen 287 VKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQL 328 (545)
T ss_pred HHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccc
Confidence 6654 8999999999999999999999999999999765443
No 218
>KOG1240|consensus
Probab=99.34 E-value=1.1e-10 Score=98.82 Aligned_cols=161 Identities=14% Similarity=0.234 Sum_probs=118.7
Q ss_pred eeeeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCC-------cEEEEEecCCceEEEEEECCCCCEEEEeeCCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETG-------KLEQIFDTRGKFTLSIAYSTDGHWIASGALDG 75 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~ 75 (181)
++.++-+...+..++.++.. .++++|+.||+|++|+++.- +....+...+..+..+...+.+..+|.++.||
T Consensus 1041 VAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG 1120 (1431)
T KOG1240|consen 1041 VAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDG 1120 (1431)
T ss_pred eehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCC
Confidence 45667777777788877655 99999999999999998521 11223333455566788888899999999999
Q ss_pred cEEEEeCCCC----------------CcccE-EEEEEcCC-CC-EEEEEeCCCcEEEEecCCCceeeeee---cCCcEEE
Q psy10953 76 IINIFDANTG----------------HSSWV-LSTAFTRD-GK-FFISASADHTVRVWNFARRENMHTFK---HADQVWC 133 (181)
Q Consensus 76 ~v~i~d~~~~----------------~~~~v-~~~~~s~~-~~-~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~v~~ 133 (181)
.|.+.++... ..+.+ ..-+|... +. .++.+..-+.|..||.+........+ .++.|++
T Consensus 1121 ~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTS 1200 (1431)
T KOG1240|consen 1121 SVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTS 1200 (1431)
T ss_pred eEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeE
Confidence 9999987531 11222 22234332 23 67778888999999998876665554 4577999
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
++++|.++.++.|...|.+.+||++=+.++.
T Consensus 1201 i~idp~~~WlviGts~G~l~lWDLRF~~~i~ 1231 (1431)
T KOG1240|consen 1201 IVIDPWCNWLVIGTSRGQLVLWDLRFRVPIL 1231 (1431)
T ss_pred EEecCCceEEEEecCCceEEEEEeecCceee
Confidence 9999999999999999999999997655554
No 219
>KOG0290|consensus
Probab=99.33 E-value=5.8e-11 Score=86.82 Aligned_cols=148 Identities=11% Similarity=0.252 Sum_probs=106.3
Q ss_pred eeccCeeeEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCcEEEEE-ecC--CceEEEEEECCCC-CEEEE-eeCCCcEEE
Q psy10953 6 KINVGPVDMWNVVFSPDDKY-VLSGSQSGKINLYGVETGKLEQIF-DTR--GKFTLSIAYSTDG-HWIAS-GALDGIINI 79 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~-l~~~~~d~~i~~~d~~~~~~~~~~-~~~--~~~~~~~~~s~d~-~~l~~-~~~d~~v~i 79 (181)
.+..+-++|++++|..++.. +|+.+.||.+|+||++.-.-...+ ... ......++|++.. +++++ +.....|.+
T Consensus 191 QLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~i 270 (364)
T KOG0290|consen 191 QLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVI 270 (364)
T ss_pred EEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEE
Confidence 45567778999999987664 678999999999999865543332 211 2334467887744 66776 445567889
Q ss_pred EeCCC---------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCC------ceeeeeecCCcEEEEEEccC-CCE
Q psy10953 80 FDANT---------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARR------ENMHTFKHADQVWCVCVAPD-GDK 142 (181)
Q Consensus 80 ~d~~~---------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~------~~~~~~~~~~~v~~~~~sp~-g~~ 142 (181)
.|++. +|...|++++|.|.. .++.+++.|..+.+||+..- .++..+....+|+.+.|+|. +..
T Consensus 271 LDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dw 350 (364)
T KOG0290|consen 271 LDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDW 350 (364)
T ss_pred EEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCE
Confidence 99873 588899999999975 58999999999999998652 12333446678999999964 556
Q ss_pred EEEEcCCCcEEE
Q psy10953 143 FVSVGEDKAVHM 154 (181)
Q Consensus 143 l~~~~~d~~v~i 154 (181)
|+.+. ++.+.+
T Consensus 351 iai~~-~kklei 361 (364)
T KOG0290|consen 351 IAICF-GKKLEI 361 (364)
T ss_pred EEEEe-cCeeeE
Confidence 66555 444444
No 220
>KOG0771|consensus
Probab=99.32 E-value=4.1e-11 Score=91.00 Aligned_cols=113 Identities=24% Similarity=0.406 Sum_probs=90.3
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEe-CC-------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce-------
Q psy10953 57 LSIAYSTDGHWIASGALDGIINIFD-AN-------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN------- 121 (181)
Q Consensus 57 ~~~~~s~d~~~l~~~~~d~~v~i~d-~~-------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~------- 121 (181)
..++|+.+|..+++++.||.+++|+ .. ..|...|.++.|+|||++|++.+.| ..+||+..++..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 4789999999999999999999999 32 3577889999999999999999999 999999765410
Q ss_pred ---------------------e----------eee----ec-------------CCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 122 ---------------------M----------HTF----KH-------------ADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 122 ---------------------~----------~~~----~~-------------~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
+ ... .+ ...|.+++.|++|++++.|+-||.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 0 000 00 12578999999999999999999999
Q ss_pred EEeCCCCeeEEEcCCCC
Q psy10953 154 MYSYKPEEEVEVNGGGG 170 (181)
Q Consensus 154 i~~~~~~~~~~~~~~~~ 170 (181)
+++...-+.+......|
T Consensus 307 i~~~~~lq~~~~vk~aH 323 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVKEAH 323 (398)
T ss_pred EEEeceeeeeEeehhhh
Confidence 99988776665554443
No 221
>KOG1524|consensus
Probab=99.31 E-value=4.3e-11 Score=93.82 Aligned_cols=132 Identities=14% Similarity=0.265 Sum_probs=109.5
Q ss_pred EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-------CCcccEEEEEEcC
Q psy10953 25 YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-------GHSSWVLSTAFTR 97 (181)
Q Consensus 25 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-------~~~~~v~~~~~s~ 97 (181)
.++.++.||.+.+.+ +.++....+..|...+.+-.|+|||.-|++++.||.|++|.... .....|.+++|.|
T Consensus 77 ~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p 155 (737)
T KOG1524|consen 77 TLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAP 155 (737)
T ss_pred eEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECC
Confidence 577888899999885 56777777888888888899999999999999999999998532 2345799999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 98 DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 98 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+.+.++-+. .+.+.+=.++....+..++ |.+-|.++.|+|..+.+++|++|-..++||-.
T Consensus 156 ~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~ 216 (737)
T KOG1524|consen 156 NSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ 216 (737)
T ss_pred CCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc
Confidence 987555443 4578888887777777776 77778999999999999999999999999963
No 222
>KOG2321|consensus
Probab=99.30 E-value=2.9e-10 Score=89.78 Aligned_cols=161 Identities=17% Similarity=0.285 Sum_probs=111.7
Q ss_pred eeeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcE--EEEEecC--------Cc-------------------------
Q psy10953 11 PVDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKL--EQIFDTR--------GK------------------------- 54 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~--~~~~~~~--------~~------------------------- 54 (181)
|.-+..|..+|||+|+ |+|.....|++||+..-.+ .+.+... .+
T Consensus 51 p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~ 130 (703)
T KOG2321|consen 51 PTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRT 130 (703)
T ss_pred ccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeeee
Confidence 3336789999999997 5777888999999864322 1111110 00
Q ss_pred ----eEEEEEECCCCCEEEEeeCCCcEEEEeCCCC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee
Q psy10953 55 ----FTLSIAYSTDGHWIASGALDGIINIFDANTG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM 122 (181)
Q Consensus 55 ----~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 122 (181)
+-..++++.-..=|+.++....|+-+++..| ....++.+..++-..+|++|+.+|.|.+||.+.....
T Consensus 131 RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv 210 (703)
T KOG2321|consen 131 RIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV 210 (703)
T ss_pred ecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhh
Confidence 0012222221112334444456777777654 2356788999999999999999999999999987655
Q ss_pred eeee-------cCC-----cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCCCc
Q psy10953 123 HTFK-------HAD-----QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGGGE 171 (181)
Q Consensus 123 ~~~~-------~~~-----~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~ 171 (181)
..+. +++ .|+++.|+.+|-.+++|..+|.|.+||+...+++.+..++.+
T Consensus 211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e 271 (703)
T KOG2321|consen 211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYE 271 (703)
T ss_pred eeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCc
Confidence 5443 222 389999999999999999999999999999998888877643
No 223
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.30 E-value=7.5e-10 Score=88.11 Aligned_cols=151 Identities=15% Similarity=0.201 Sum_probs=97.8
Q ss_pred EEEEEEcCCCCEEEE-EeCCC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC--cEEEEeCCCCCc
Q psy10953 14 MWNVVFSPDDKYVLS-GSQSG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG--IINIFDANTGHS 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~-~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~--~v~i~d~~~~~~ 87 (181)
....+|||||+.|+. .+.++ .|.++|+.+++...+... ........|+|||+.++..+. ++ .++++|+.++..
T Consensus 245 ~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~-~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~ 323 (430)
T PRK00178 245 NGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNH-PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA 323 (430)
T ss_pred cCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccC-CCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 456899999998874 44444 688889998876654332 222346789999998876553 33 577777765432
Q ss_pred c-------cEEEEEEcCCCCEEEEEeCC-C--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC---CcEEE
Q psy10953 88 S-------WVLSTAFTRDGKFFISASAD-H--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED---KAVHM 154 (181)
Q Consensus 88 ~-------~v~~~~~s~~~~~l~~~~~d-~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d---~~v~i 154 (181)
. ......|+|+|++++..+.+ + .|.+||+.++... .+..........|+|||+.++..+.+ ..+.+
T Consensus 324 ~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~ 402 (430)
T PRK00178 324 ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTDTSLDESPSVAPNGTMLIYATRQQGRGVLML 402 (430)
T ss_pred EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccCCCCCCCceECCCCCEEEEEEecCCceEEEE
Confidence 1 22346899999988776643 2 5888998876532 22222223356899999998777643 24667
Q ss_pred EeCCCCeeEEEc
Q psy10953 155 YSYKPEEEVEVN 166 (181)
Q Consensus 155 ~~~~~~~~~~~~ 166 (181)
++...+....+.
T Consensus 403 ~~~~g~~~~~l~ 414 (430)
T PRK00178 403 VSINGRVRLPLP 414 (430)
T ss_pred EECCCCceEECc
Confidence 777544443433
No 224
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.30 E-value=7.8e-10 Score=87.50 Aligned_cols=145 Identities=18% Similarity=0.235 Sum_probs=97.3
Q ss_pred eEEEEEEcCCCCEEEE-EeCCC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC--cEEEEeCCCCC
Q psy10953 13 DMWNVVFSPDDKYVLS-GSQSG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG--IINIFDANTGH 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~-~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~--~v~i~d~~~~~ 86 (181)
....++|+|||+.|+. .+.++ .|.+||+.+++...+... ........|+|||++|+..+. .+ .++++|+.++.
T Consensus 235 ~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~ 313 (417)
T TIGR02800 235 MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNG-PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE 313 (417)
T ss_pred CccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCC-CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 3456899999998764 44443 588899988876555432 222335789999998876554 33 57778876543
Q ss_pred -------cccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCC---cEE
Q psy10953 87 -------SSWVLSTAFTRDGKFFISASADH---TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDK---AVH 153 (181)
Q Consensus 87 -------~~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~---~v~ 153 (181)
...+....|+|+|++++..+.++ .|.+||+.++.... +.........+|+|+|+.|+..+.++ .++
T Consensus 314 ~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~ 392 (417)
T TIGR02800 314 VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV-LTDTGLDESPSFAPNGRMILYATTRGGRGVLG 392 (417)
T ss_pred EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE-ccCCCCCCCceECCCCCEEEEEEeCCCcEEEE
Confidence 23345678999999988888765 78999988754322 22222344568999999988877643 355
Q ss_pred EEeCCC
Q psy10953 154 MYSYKP 159 (181)
Q Consensus 154 i~~~~~ 159 (181)
+.+...
T Consensus 393 ~~~~~g 398 (417)
T TIGR02800 393 LVSTDG 398 (417)
T ss_pred EEECCC
Confidence 555443
No 225
>KOG0650|consensus
Probab=99.30 E-value=7.6e-11 Score=93.36 Aligned_cols=150 Identities=15% Similarity=0.244 Sum_probs=119.8
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
....+..+..+.|+..|.||++...+ ..|.++++...+...-|......+..+.|+|...+|+.+.. ..|++||+.
T Consensus 517 ~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~ 595 (733)
T KOG0650|consen 517 VIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLS 595 (733)
T ss_pred EEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehh
Confidence 34567778999999999999987664 46888888765544444445556778999999888876664 479999986
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc-eeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRE-NMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
.+ -..++..++.+|.|..|+.++.|+.+.+||+.... +..++. |...+++++|++.-..|++|+.|+.+.
T Consensus 596 kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~ 675 (733)
T KOG0650|consen 596 KQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVI 675 (733)
T ss_pred HHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEE
Confidence 43 24578899999999999999999999999998654 344444 778899999999999999999999999
Q ss_pred EEeC
Q psy10953 154 MYSY 157 (181)
Q Consensus 154 i~~~ 157 (181)
++.-
T Consensus 676 Vfhg 679 (733)
T KOG0650|consen 676 VFHG 679 (733)
T ss_pred EEee
Confidence 8873
No 226
>KOG1587|consensus
Probab=99.29 E-value=1.5e-10 Score=93.55 Aligned_cols=150 Identities=18% Similarity=0.248 Sum_probs=108.4
Q ss_pred CeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEE--E----EEecCCceEEEEEECCCC--CEEEEeeCCCcEEEE
Q psy10953 10 GPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLE--Q----IFDTRGKFTLSIAYSTDG--HWIASGALDGIINIF 80 (181)
Q Consensus 10 ~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~--~----~~~~~~~~~~~~~~s~d~--~~l~~~~~d~~v~i~ 80 (181)
.+..+.++.|+| +..+++.|+.+|.|.+||++.+... . ....|...+..+.|-.+- .-|++++.||.|..|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 344578899998 5667788999999999999866542 1 122345556667775543 449999999999999
Q ss_pred eCCC-----------------------------------------------------------------------CCccc
Q psy10953 81 DANT-----------------------------------------------------------------------GHSSW 89 (181)
Q Consensus 81 d~~~-----------------------------------------------------------------------~~~~~ 89 (181)
+++. .|.+.
T Consensus 321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~ 400 (555)
T KOG1587|consen 321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP 400 (555)
T ss_pred eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 8531 02245
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEecC-CCceeeeee-cCCcEEEEEEccCC-CEEEEEcCCCcEEEEeCCC
Q psy10953 90 VLSTAFTRDGKFFISASADHTVRVWNFA-RRENMHTFK-HADQVWCVCVAPDG-DKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~-~~~~v~~~~~sp~g-~~l~~~~~d~~v~i~~~~~ 159 (181)
|..+.++|-+..++..+-|.++++|... ...++..+. +.+.+.+++|||.- ..|+++..+|.+.+||+..
T Consensus 401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~ 473 (555)
T KOG1587|consen 401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQ 473 (555)
T ss_pred eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhc
Confidence 6778899987655544449999999877 555555554 56669999999975 4567777899999999843
No 227
>KOG1517|consensus
Probab=99.29 E-value=1.4e-10 Score=97.09 Aligned_cols=144 Identities=15% Similarity=0.249 Sum_probs=107.8
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-eEEEEEE-CCCCCEEEEeeCCCcEEEEeCCC---------
Q psy10953 16 NVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-FTLSIAY-STDGHWIASGALDGIINIFDANT--------- 84 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~-s~d~~~l~~~~~d~~v~i~d~~~--------- 84 (181)
-++|-....+|+++++-..|++||....+...-+..... .+..++- .+.|+.+++|-.||.+++||.+.
T Consensus 1170 v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~ 1249 (1387)
T KOG1517|consen 1170 VVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCV 1249 (1387)
T ss_pred eeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcccccee
Confidence 356777777777877789999999988877766554322 2333322 22478999999999999999863
Q ss_pred --CCccc--EEEEEEcCCCC-EEEEEeCCCcEEEEecCCCcee--eeee----cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 85 --GHSSW--VLSTAFTRDGK-FFISASADHTVRVWNFARRENM--HTFK----HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 85 --~~~~~--v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~--~~~~----~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
.|... |..+.+.++|- .|++++.+|.|++||++..... .++. ..+..+++..++....+++|+. +.|.
T Consensus 1250 ~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ik 1328 (1387)
T KOG1517|consen 1250 YREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIK 1328 (1387)
T ss_pred ecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEE
Confidence 34444 88999999875 6999999999999999974221 1221 2335899999999999999998 9999
Q ss_pred EEeCCCC
Q psy10953 154 MYSYKPE 160 (181)
Q Consensus 154 i~~~~~~ 160 (181)
||+....
T Consensus 1329 Iy~~~G~ 1335 (1387)
T KOG1517|consen 1329 IYSLSGE 1335 (1387)
T ss_pred EEecChh
Confidence 9999543
No 228
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=1.3e-09 Score=86.71 Aligned_cols=160 Identities=16% Similarity=0.174 Sum_probs=98.7
Q ss_pred eccCeeeEEEEEEcCCCCEE--E-EEeCC--CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC----c
Q psy10953 7 INVGPVDMWNVVFSPDDKYV--L-SGSQS--GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG----I 76 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l--~-~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~----~ 76 (181)
++.+......-+|||||+.+ + +...+ ..|.+.++.+++..++....+. .....|||||+.|+..+. +| .
T Consensus 180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~-~~~p~wSPDG~~Laf~s~~~g~~di~ 258 (428)
T PRK01029 180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGN-QLMPTFSPRKKLLAFISDRYGNPDLF 258 (428)
T ss_pred cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCC-ccceEECCCCCEEEEEECCCCCccee
Confidence 44444445667899999863 2 33333 3577778888876655443333 346899999998886542 22 2
Q ss_pred EEEEeCCCCC-----------cccEEEEEEcCCCCEEEEEe-CCCc--EEEEecCC-Cceeeeee-cCCcEEEEEEccCC
Q psy10953 77 INIFDANTGH-----------SSWVLSTAFTRDGKFFISAS-ADHT--VRVWNFAR-RENMHTFK-HADQVWCVCVAPDG 140 (181)
Q Consensus 77 v~i~d~~~~~-----------~~~v~~~~~s~~~~~l~~~~-~d~~--i~v~d~~~-~~~~~~~~-~~~~v~~~~~sp~g 140 (181)
+..|++..+. ........|+|||+.|+..+ .++. ++++++.. +.....+. ....+...+|||||
T Consensus 259 ~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG 338 (428)
T PRK01029 259 IQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDG 338 (428)
T ss_pred EEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCC
Confidence 3336654311 11234578999999777665 4565 44445432 22223232 33456788999999
Q ss_pred CEEEEEcCC---CcEEEEeCCCCeeEEEcC
Q psy10953 141 DKFVSVGED---KAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 141 ~~l~~~~~d---~~v~i~~~~~~~~~~~~~ 167 (181)
+.|+..+.+ ..|.+|++.+++...+..
T Consensus 339 ~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~ 368 (428)
T PRK01029 339 KKIAFCSVIKGVRQICVYDLATGRDYQLTT 368 (428)
T ss_pred CEEEEEEcCCCCcEEEEEECCCCCeEEccC
Confidence 998876643 368999998776655443
No 229
>KOG1963|consensus
Probab=99.25 E-value=6.5e-10 Score=91.17 Aligned_cols=148 Identities=20% Similarity=0.278 Sum_probs=113.0
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE-E--Ee-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--C---
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ-I--FD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT--G--- 85 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~-~--~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--~--- 85 (181)
..+.+++.|......- +..+.+|......... . .. .|...+.+.++||.+++++++..||.|.+|.--. .
T Consensus 164 ~~I~~~~~ge~~~i~~-~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~ 242 (792)
T KOG1963|consen 164 KSIVDNNSGEFKGIVH-MCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSE 242 (792)
T ss_pred ccEEEcCCceEEEEEE-eeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccc
Confidence 5677788887765554 4577788877644111 0 00 1223346789999999999999999999996432 1
Q ss_pred -------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 86 -------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 86 -------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
|...|++++|+++|.+|++|+.++.+.+|.+.+++....-+....|..+.+|||+...+...+|+.|++....
T Consensus 243 t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 243 TCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred cceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence 4567999999999999999999999999999998833222366789999999999999999999999998885
Q ss_pred CCeeE
Q psy10953 159 PEEEV 163 (181)
Q Consensus 159 ~~~~~ 163 (181)
.....
T Consensus 323 dl~~k 327 (792)
T KOG1963|consen 323 DLEIK 327 (792)
T ss_pred chhhh
Confidence 54433
No 230
>KOG2139|consensus
Probab=99.25 E-value=9.8e-10 Score=82.64 Aligned_cols=153 Identities=14% Similarity=0.292 Sum_probs=106.4
Q ss_pred eeeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQ-SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
-..|.++.|.+||..+++++. |..|++||..+++...+.......+.-+.|||||.+|+++..|+..++|.....
T Consensus 195 h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~e 274 (445)
T KOG2139|consen 195 HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKE 274 (445)
T ss_pred CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceec
Confidence 356899999999999998886 568999999999888776333333446899999999999999999999955321
Q ss_pred ----CcccEEEEEEcCCCCEEEEEeCCCcEEEEecC--CCc-------------eeeeee----------cCCcEEEEEE
Q psy10953 86 ----HSSWVLSTAFTRDGKFFISASADHTVRVWNFA--RRE-------------NMHTFK----------HADQVWCVCV 136 (181)
Q Consensus 86 ----~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~--~~~-------------~~~~~~----------~~~~v~~~~~ 136 (181)
-.++|....|+|.|++|+.++. +.-.+|.+. ... .+..+. ..+++.++++
T Consensus 275 rw~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~law 353 (445)
T KOG2139|consen 275 RWILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAW 353 (445)
T ss_pred ceeccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeE
Confidence 1347888899999996554442 233344321 100 011110 1356889999
Q ss_pred ccCCCEEEEEcCCCc--------EEEEeCCCCeeEE
Q psy10953 137 APDGDKFVSVGEDKA--------VHMYSYKPEEEVE 164 (181)
Q Consensus 137 sp~g~~l~~~~~d~~--------v~i~~~~~~~~~~ 164 (181)
.|.|.++++.-..+. |.+|+......++
T Consensus 354 DpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~ve 389 (445)
T KOG2139|consen 354 DPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVE 389 (445)
T ss_pred CCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceE
Confidence 999999998775433 5567765544444
No 231
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=2.2e-09 Score=85.86 Aligned_cols=150 Identities=18% Similarity=0.181 Sum_probs=94.8
Q ss_pred EEEEEEcCCCCEEEE-EeCCCc--EEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC--cEEEEeCCCCCc
Q psy10953 14 MWNVVFSPDDKYVLS-GSQSGK--INLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG--IINIFDANTGHS 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~-~~~d~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~--~v~i~d~~~~~~ 87 (181)
....+|||||+.|+. .+.++. |.++|+.+++..++... ........|+|||+.++..+. ++ .++++|+.++..
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~-~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~ 342 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRH-RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV 342 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccC-CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 346789999998875 455664 77789888876654432 223346899999998876543 33 566667765432
Q ss_pred c-------cEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC-CC--cEEE
Q psy10953 88 S-------WVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE-DK--AVHM 154 (181)
Q Consensus 88 ~-------~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~--~v~i 154 (181)
. .....+|+|+|++++..+. ++ .|.++|+.++.... +..........|+|||+.++..+. ++ .+++
T Consensus 343 ~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~ 421 (448)
T PRK04792 343 SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAA 421 (448)
T ss_pred EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCCCCCCCceECCCCCEEEEEEecCCceEEEE
Confidence 1 2234689999998877654 33 46667887765432 221112234579999999876664 33 3666
Q ss_pred EeCCCCeeEEE
Q psy10953 155 YSYKPEEEVEV 165 (181)
Q Consensus 155 ~~~~~~~~~~~ 165 (181)
++...+.+..+
T Consensus 422 ~~~~G~~~~~l 432 (448)
T PRK04792 422 VSIDGRFKARL 432 (448)
T ss_pred EECCCCceEEC
Confidence 77654444333
No 232
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.24 E-value=2.9e-09 Score=92.75 Aligned_cols=148 Identities=19% Similarity=0.310 Sum_probs=107.8
Q ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC---------------ceEEEEEECCCCCEEE-EeeCCCc
Q psy10953 14 MWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRG---------------KFTLSIAYSTDGHWIA-SGALDGI 76 (181)
Q Consensus 14 ~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---------------~~~~~~~~s~d~~~l~-~~~~d~~ 76 (181)
.++++|+| ++.++++...++.|++||..++.... +...+ .....++++|+++.|+ +-..++.
T Consensus 685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~ 763 (1057)
T PLN02919 685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSS 763 (1057)
T ss_pred CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-EecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCe
Confidence 46899999 55566677778999999988776532 21110 1234689999998554 4566789
Q ss_pred EEEEeCCCCCc-----------------------------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-
Q psy10953 77 INIFDANTGHS-----------------------------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK- 126 (181)
Q Consensus 77 v~i~d~~~~~~-----------------------------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~- 126 (181)
|++||+.++.. .....++++++|+.+++-..++.|++||..++.......
T Consensus 764 Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~ 843 (1057)
T PLN02919 764 IRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGT 843 (1057)
T ss_pred EEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEecc
Confidence 99999864320 123578899999998888899999999998765442221
Q ss_pred -------------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 127 -------------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 127 -------------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
.-..+.+++++++|+.+++-+.++.|++|++.++..
T Consensus 844 G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 844 GKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 112577899999999888888899999999988653
No 233
>KOG1310|consensus
Probab=99.22 E-value=4.7e-11 Score=93.85 Aligned_cols=114 Identities=23% Similarity=0.471 Sum_probs=94.9
Q ss_pred EEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC---------CCCCcccEEEEEEcCC--CCEEEEEeCCCcEEEE
Q psy10953 46 EQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA---------NTGHSSWVLSTAFTRD--GKFFISASADHTVRVW 114 (181)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~---------~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~ 114 (181)
.+.+..|...+.++.|+.+|.+|++|+.|-.+.+||. .++|..-|.++.|-|. .+.+++|..|..|++|
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 3556678888889999999999999999999999996 3688888999999994 5689999999999999
Q ss_pred ecCCCc----------eeeeee-cCCcEEEEEEccCC-CEEEEEcCCCcEEEEeCCC
Q psy10953 115 NFARRE----------NMHTFK-HADQVWCVCVAPDG-DKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 115 d~~~~~----------~~~~~~-~~~~v~~~~~sp~g-~~l~~~~~d~~v~i~~~~~ 159 (181)
|+...+ ....+. |...|-.++.-|++ ..+.++++||.++-||++.
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 997421 122222 66678888888988 8899999999999999965
No 234
>KOG0974|consensus
Probab=99.22 E-value=3.3e-10 Score=94.37 Aligned_cols=140 Identities=24% Similarity=0.392 Sum_probs=114.3
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC---------CCc
Q psy10953 17 VVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT---------GHS 87 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---------~~~ 87 (181)
+-++++.-++++|+-.+.|.+|+....+.-..+..|...+.++.++.||.++++.+.|.++++|++.+ +|.
T Consensus 139 ~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHs 218 (967)
T KOG0974|consen 139 IGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHS 218 (967)
T ss_pred EeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccccccc
Confidence 44678888999999999999999863333233556666778999999999999999999999999875 477
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-c-CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 88 SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-H-ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 88 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~-~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
..|..+.|.|+ .+++++.|.++++|+..... +..+. | ...+|.++.+++.-.+++++.|+.+++|++..
T Consensus 219 aRvw~~~~~~n--~i~t~gedctcrvW~~~~~~-l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 219 ARVWACCFLPN--RIITVGEDCTCRVWGVNGTQ-LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred ceeEEEEeccc--eeEEeccceEEEEEecccce-ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 78999999998 89999999999999654332 22443 3 35699999999999999999999999999853
No 235
>KOG3914|consensus
Probab=99.22 E-value=5.8e-10 Score=84.50 Aligned_cols=150 Identities=17% Similarity=0.235 Sum_probs=106.1
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE----EEEEecCCceEEEEEECCCCCEEEEeeC---CCcEEEEeCC--
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL----EQIFDTRGKFTLSIAYSTDGHWIASGAL---DGIINIFDAN-- 83 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~s~d~~~l~~~~~---d~~v~i~d~~-- 83 (181)
-.+.+..+|.++++|.+..++...++++..... .......... ..+.+-.+......+.. ...+.+|...
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~-~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRP-TAISFIREDTSVLVADKAGDVYSFDILSADSG 142 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCc-ceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence 356777899999999998888887887764432 2222222221 23444444444444433 3444555433
Q ss_pred -----CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee--ecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 84 -----TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF--KHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 84 -----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
-||.+.+.+++++||+++++++..|+.|++-.+.....+..+ .|..-|..+++-++ +.|+++|.|+++++|+
T Consensus 143 ~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd 221 (390)
T KOG3914|consen 143 RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWD 221 (390)
T ss_pred CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEe
Confidence 257777899999999999999999999999887776666655 47778999988765 4589999999999999
Q ss_pred CCCCeeEE
Q psy10953 157 YKPEEEVE 164 (181)
Q Consensus 157 ~~~~~~~~ 164 (181)
+.+|..+.
T Consensus 222 ~~sgk~L~ 229 (390)
T KOG3914|consen 222 ITSGKLLD 229 (390)
T ss_pred cccCCccc
Confidence 99886653
No 236
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.22 E-value=8.4e-09 Score=80.47 Aligned_cols=137 Identities=21% Similarity=0.314 Sum_probs=97.5
Q ss_pred CEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc-------ccEEEEEE
Q psy10953 24 KYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS-------SWVLSTAF 95 (181)
Q Consensus 24 ~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~-------~~v~~~~~ 95 (181)
+++ ++-..+++|.+.|..+.+.+..+...+.....+.++|||+++++.+.|+.+.++|+.+.+. .....+++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~ 85 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAV 85 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEE
Confidence 344 4666789999999999999998887555455688999999999999999999999987542 23577999
Q ss_pred cCCCCEEEEEe-CCCcEEEEecCCCceeeeeec--------CCcEEEEEEccCCCEEEEE-cCCCcEEEEeCCCC
Q psy10953 96 TRDGKFFISAS-ADHTVRVWNFARRENMHTFKH--------ADQVWCVCVAPDGDKFVSV-GEDKAVHMYSYKPE 160 (181)
Q Consensus 96 s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~--------~~~v~~~~~sp~g~~l~~~-~~d~~v~i~~~~~~ 160 (181)
|+||+++++++ ..+.+.++|.++.+.+..++- ..++..+..+|....++.. -+-+.|-+.|+...
T Consensus 86 s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~ 160 (369)
T PF02239_consen 86 SPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP 160 (369)
T ss_dssp --TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS
T ss_pred cCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc
Confidence 99999888776 578999999999888877642 2356777778888855544 44578888887554
No 237
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=1.7e-08 Score=80.06 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=99.9
Q ss_pred eEEEEEEcCCCCE-EEEEeCC---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eC--CCcEEEEeCCCC
Q psy10953 13 DMWNVVFSPDDKY-VLSGSQS---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-AL--DGIINIFDANTG 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~-l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~--d~~v~i~d~~~~ 85 (181)
......|||||+. ++..+.+ ..|.++|+.+++...+....+. .....|+|||+.++.. +. +..++++|+..+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~-~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGM-LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCc-EEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 3467899999995 6654443 4688999999887776553333 3467899999877653 32 356777787644
Q ss_pred Cc-------ccEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC------
Q psy10953 86 HS-------SWVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED------ 149 (181)
Q Consensus 86 ~~-------~~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d------ 149 (181)
.. .......|+|||+.++..+. .+ .|+++|+.+++....... +. ....+||||+.++..+..
T Consensus 268 ~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~-~~~~~SPDG~~Ia~~~~~~~~~~~ 345 (419)
T PRK04043 268 TLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK-NNSSVSTYKNYIVYSSRETNNEFG 345 (419)
T ss_pred cEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC-cCceECCCCCEEEEEEcCCCcccC
Confidence 21 11234689999987665553 33 688888877654322221 11 234899999998777643
Q ss_pred ---CcEEEEeCCCCeeEEEcCC
Q psy10953 150 ---KAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 150 ---~~v~i~~~~~~~~~~~~~~ 168 (181)
..|.+.++.++....+..+
T Consensus 346 ~~~~~I~v~d~~~g~~~~LT~~ 367 (419)
T PRK04043 346 KNTFNLYLISTNSDYIRRLTAN 367 (419)
T ss_pred CCCcEEEEEECCCCCeEECCCC
Confidence 2577888877765555444
No 238
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=1.1e-08 Score=81.23 Aligned_cols=160 Identities=15% Similarity=0.085 Sum_probs=100.5
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEE-eC--CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC--cEEE
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSG-SQ--SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG--IINI 79 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~-~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~--~v~i 79 (181)
.+...+......+|||||+.++.. +. +..|.++|+.+++..++....+. .....|+|||+.|+..+. .+ .+++
T Consensus 227 ~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~-d~~p~~SPDG~~I~F~Sdr~g~~~Iy~ 305 (419)
T PRK04043 227 KIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGI-DVNGNFVEDDKRIVFVSDRLGYPNIFM 305 (419)
T ss_pred EEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCc-cCccEECCCCCEEEEEECCCCCceEEE
Confidence 343344445567899999987643 32 35688889888876665433322 235789999998887653 22 6777
Q ss_pred EeCCCCCcccE-----EEEEEcCCCCEEEEEeCC---------CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 80 FDANTGHSSWV-----LSTAFTRDGKFFISASAD---------HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 80 ~d~~~~~~~~v-----~~~~~s~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
+|+.++....+ ....|+|+|+.++..... ..|++.|+.++... .+..........|+|||+.++.
T Consensus 306 ~dl~~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~~~~~~p~~SPDG~~I~f 384 (419)
T PRK04043 306 KKLNSGSVEQVVFHGKNNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTANGVNQFPRFSSDGGSIMF 384 (419)
T ss_pred EECCCCCeEeCccCCCcCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCCCCcCCeEECCCCCEEEE
Confidence 78865533111 225799999988766643 36888898776533 2322223335889999998876
Q ss_pred EcCC-C--cEEEEeCCCCeeEEEcC
Q psy10953 146 VGED-K--AVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 146 ~~~d-~--~v~i~~~~~~~~~~~~~ 167 (181)
.+.+ + .+.+.++.......+..
T Consensus 385 ~~~~~~~~~L~~~~l~g~~~~~l~~ 409 (419)
T PRK04043 385 IKYLGNQSALGIIRLNYNKSFLFPL 409 (419)
T ss_pred EEccCCcEEEEEEecCCCeeEEeec
Confidence 6643 3 35566665544444433
No 239
>KOG4547|consensus
Probab=99.18 E-value=2.2e-09 Score=84.81 Aligned_cols=151 Identities=21% Similarity=0.315 Sum_probs=116.6
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC----CceE-----EEEEECC--------------CCCEEEEeeCCCc
Q psy10953 20 SPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR----GKFT-----LSIAYST--------------DGHWIASGALDGI 76 (181)
Q Consensus 20 s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~----~~~~-----~~~~~s~--------------d~~~l~~~~~d~~ 76 (181)
+|-+.++|....||.+++|++..+++.+.|... +..+ ..+..+| |-..++.|...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 456778999999999999999999887766532 2211 1122232 2345677888999
Q ss_pred EEEEeCCC----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEE
Q psy10953 77 INIFDANT----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 77 v~i~d~~~----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~ 145 (181)
|-+|+... +|.+.|.++.++.+-..+-+++.|+.+..|+......++.+. ....+.+++++|||..+++
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~ 161 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT 161 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe
Confidence 99998753 466778888888888889999999999999999988888876 3445889999999999998
Q ss_pred EcCCCcEEEEeCCCCeeEEEcCCCCcc
Q psy10953 146 VGEDKAVHMYSYKPEEEVEVNGGGGEE 172 (181)
Q Consensus 146 ~~~d~~v~i~~~~~~~~~~~~~~~~~~ 172 (181)
++ +.|.+|++.+++.+.-.-|...+
T Consensus 162 as--~~ik~~~~~~kevv~~ftgh~s~ 186 (541)
T KOG4547|consen 162 AS--RQIKVLDIETKEVVITFTGHGSP 186 (541)
T ss_pred cc--ceEEEEEccCceEEEEecCCCcc
Confidence 88 57999999998877766665443
No 240
>KOG1517|consensus
Probab=99.18 E-value=5.8e-10 Score=93.50 Aligned_cols=137 Identities=15% Similarity=0.313 Sum_probs=105.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcE---EEEEecCCce--EEEEEECCCCC-EEEEeeCCCcEEEEeCCCCC---------
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKL---EQIFDTRGKF--TLSIAYSTDGH-WIASGALDGIINIFDANTGH--------- 86 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~--~~~~~~s~d~~-~l~~~~~d~~v~i~d~~~~~--------- 86 (181)
.|+.+++|..||.+++||.+.... +.....|... +..+.+.+.|- .|++|+.||.|++||++...
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~ 1299 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVA 1299 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeee
Confidence 579999999999999999875433 3334444444 66788877664 49999999999999998621
Q ss_pred ----cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee--------ecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 87 ----SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF--------KHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 87 ----~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.+..+++..+++...++||+. +.|+||++..... ..+ +..+.+.|++|+|-.-.+++|+.|..|.+
T Consensus 1300 ~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l-~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~i 1377 (1387)
T KOG1517|consen 1300 HWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL-NIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSI 1377 (1387)
T ss_pred ccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhh-cccccCcccccCcCCCcceeeecchhHhhhhccCCceEEE
Confidence 123678888999999999998 9999999865432 111 12345789999999989999999999999
Q ss_pred EeCCCC
Q psy10953 155 YSYKPE 160 (181)
Q Consensus 155 ~~~~~~ 160 (181)
|.-...
T Consensus 1378 Ys~~k~ 1383 (1387)
T KOG1517|consen 1378 YSCEKP 1383 (1387)
T ss_pred eecCCc
Confidence 987544
No 241
>KOG0974|consensus
Probab=99.16 E-value=2.2e-09 Score=89.59 Aligned_cols=140 Identities=24% Similarity=0.484 Sum_probs=114.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceE----EEEEECCCCCEEEEeeCCCcEEEEeCC--------C
Q psy10953 17 VVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFT----LSIAYSTDGHWIASGALDGIINIFDAN--------T 84 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~s~d~~~l~~~~~d~~v~i~d~~--------~ 84 (181)
..+.-+.+.++.++.+..+.+||...+......+...... ..+-++++.-++++|+--+.+.+|+.. .
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~ 172 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLK 172 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceec
Confidence 3445567778888888899999998887766555433321 124557777789999999999999864 4
Q ss_pred CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee--eeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 85 GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH--TFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 85 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+|.+.+.++.++-+|+++++++.|.++++|++.+.+... -+.|+.++|.++|+|+ .+++++.|.+.++|+..
T Consensus 173 GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 173 GHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN 246 (967)
T ss_pred ccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc
Confidence 788999999999999999999999999999999876443 4579999999999999 89999999999999653
No 242
>KOG0644|consensus
Probab=99.16 E-value=4.5e-11 Score=97.83 Aligned_cols=163 Identities=19% Similarity=0.289 Sum_probs=122.8
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+++.+..+..++.+++.+.+..++++++.|..|++|.+.++..+.++..|...+..++|+|-. +.+.||++.+||.
T Consensus 224 ~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~ 299 (1113)
T KOG0644|consen 224 CLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDA 299 (1113)
T ss_pred hhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccc
Confidence 466778889999999999999999999999999999999999999888888888899999954 6788999999997
Q ss_pred CCC------------Cccc------------------------------------EEEEEEcCCC-CEEEEEeCCCcEEE
Q psy10953 83 NTG------------HSSW------------------------------------VLSTAFTRDG-KFFISASADHTVRV 113 (181)
Q Consensus 83 ~~~------------~~~~------------------------------------v~~~~~s~~~-~~l~~~~~d~~i~v 113 (181)
+-. .... +..+..+.+- ...+++-.+..+.+
T Consensus 300 r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~v 379 (1113)
T KOG0644|consen 300 RLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCV 379 (1113)
T ss_pred cccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeee
Confidence 510 0000 1111222121 23334445667888
Q ss_pred EecCCCceeeeee-cCCcEEEEEEccCCCE-EEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 114 WNFARRENMHTFK-HADQVWCVCVAPDGDK-FVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 114 ~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
|++.++...+... |.+.++.+.++|-+.. ..+++.||...|||+-.|-++....-|
T Consensus 380 wnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g 437 (1113)
T KOG0644|consen 380 WNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG 437 (1113)
T ss_pred eecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc
Confidence 8888887776654 7788999999996554 567888999999999877766655433
No 243
>KOG4227|consensus
Probab=99.13 E-value=1.6e-09 Score=82.43 Aligned_cols=110 Identities=16% Similarity=0.276 Sum_probs=95.6
Q ss_pred CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC---------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy10953 52 RGKFTLSIAYSTDGHWIASGALDGIINIFDANT---------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 52 ~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 116 (181)
|...+..+.||.++++|++|+.|..+.+|+... .|.+-|.+++|....+++.+|..+++|..-|+
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDi 134 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDI 134 (609)
T ss_pred hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeec
Confidence 445567899999999999999999999998631 24467899999999999999999999999999
Q ss_pred CCCceeeeeecCC---cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 117 ARRENMHTFKHAD---QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 117 ~~~~~~~~~~~~~---~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
.+.+.+..+.+.+ .|+.+..+|..+.|++.+.++.|.+|++...+
T Consensus 135 Et~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 135 ETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred ccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 9988887776554 89999999999999999999999999986543
No 244
>KOG3881|consensus
Probab=99.13 E-value=1.5e-09 Score=82.10 Aligned_cols=125 Identities=17% Similarity=0.226 Sum_probs=104.3
Q ss_pred EEEEEcCC--CCEEEEEeCCCcEEEEeCCCC-cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------
Q psy10953 15 WNVVFSPD--DKYVLSGSQSGKINLYGVETG-KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------ 85 (181)
Q Consensus 15 ~~~~~s~~--g~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------ 85 (181)
.++.|-+. ...+|++..-+.+++||.+.+ +....|......+.++...|+++.+++|..-+.+..+|++.+
T Consensus 206 tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~ 285 (412)
T KOG3881|consen 206 TDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCG 285 (412)
T ss_pred ccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccc
Confidence 45777777 788999999999999999844 455666666667778999999999999999999999999853
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccC
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPD 139 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~ 139 (181)
-.+.+.++..+|.++++++++-|..++|+|+.+.+.++.......++++.+.++
T Consensus 286 ~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 286 LKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD 342 (412)
T ss_pred cCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence 356789999999999999999999999999999777766665566777777654
No 245
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.12 E-value=6.1e-08 Score=75.14 Aligned_cols=147 Identities=19% Similarity=0.384 Sum_probs=98.2
Q ss_pred eeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCc--EEE--EEe-cCCceEEEEEECCCCCEEEEe-eCCCcEEEEeCC-
Q psy10953 12 VDMWNVVFSPDDKYVLSGS-QSGKINLYGVETGK--LEQ--IFD-TRGKFTLSIAYSTDGHWIASG-ALDGIINIFDAN- 83 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~~~~--~~~--~~~-~~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~- 83 (181)
....++.|+|||+++++.. ....|.+|++.... +.. .+. ..+.-...+.|+|++++++.. -.++.|.++++.
T Consensus 144 ~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~ 223 (345)
T PF10282_consen 144 PHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDP 223 (345)
T ss_dssp TCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred ccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecc
Confidence 3356899999999987754 34589999987654 432 222 223334579999999988665 457788888765
Q ss_pred -CC----------------CcccEEEEEEcCCCCEEEEEeC-CCcEEEEecCC--Cc--eeeeeec-CCcEEEEEEccCC
Q psy10953 84 -TG----------------HSSWVLSTAFTRDGKFFISASA-DHTVRVWNFAR--RE--NMHTFKH-ADQVWCVCVAPDG 140 (181)
Q Consensus 84 -~~----------------~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~--~~--~~~~~~~-~~~v~~~~~sp~g 140 (181)
.+ .......++++|+|++|.++.. ...|.+|++.. +. .+..+.. ....+.++++|+|
T Consensus 224 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g 303 (345)
T PF10282_consen 224 SDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDG 303 (345)
T ss_dssp TTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTS
T ss_pred cCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCC
Confidence 21 0124678899999998777664 56799999832 32 2233333 3448999999999
Q ss_pred CEEEEEcC-CCcEEEEeCC
Q psy10953 141 DKFVSVGE-DKAVHMYSYK 158 (181)
Q Consensus 141 ~~l~~~~~-d~~v~i~~~~ 158 (181)
++|+++.. ++.|.+|++.
T Consensus 304 ~~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 304 RYLYVANQDSNTVSVFDID 322 (345)
T ss_dssp SEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEecCCCeEEEEEEe
Confidence 99988875 5789999874
No 246
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.10 E-value=3.2e-07 Score=70.75 Aligned_cols=151 Identities=15% Similarity=0.228 Sum_probs=106.4
Q ss_pred EEEEEcCCCCEEEEEeC--CCcEEEEeCCCCcEEEEEecCCce-------------------------------EEEEE-
Q psy10953 15 WNVVFSPDDKYVLSGSQ--SGKINLYGVETGKLEQIFDTRGKF-------------------------------TLSIA- 60 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~-------------------------------~~~~~- 60 (181)
..+++||||++|+.... +..+.+.|+.+++.+..+...+.. .....
T Consensus 108 ~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~v 187 (352)
T TIGR02658 108 WMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEV 187 (352)
T ss_pred ceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeee
Confidence 47899999999987763 688999999998876644322100 00001
Q ss_pred E-------------CC-CCCEEEEeeCCCcEEEEeCCCCC--------------------cccEEEEEEcCCCCEEEEEe
Q psy10953 61 Y-------------ST-DGHWIASGALDGIINIFDANTGH--------------------SSWVLSTAFTRDGKFFISAS 106 (181)
Q Consensus 61 ~-------------s~-d~~~l~~~~~d~~v~i~d~~~~~--------------------~~~v~~~~~s~~~~~l~~~~ 106 (181)
| ++ +|+++..... |.|++.|+.... ......++++|+++.+....
T Consensus 188 f~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~ 266 (352)
T TIGR02658 188 FHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLA 266 (352)
T ss_pred ecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEe
Confidence 1 12 5555544443 888888853210 11123489999998776643
Q ss_pred C----------CCcEEEEecCCCceeeeeecCCcEEEEEEccCCC-EEEEEc-CCCcEEEEeCCCCeeEEEc
Q psy10953 107 A----------DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGD-KFVSVG-EDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 107 ~----------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~d~~v~i~~~~~~~~~~~~ 166 (181)
. ...|.++|.++++.+..+.-...++.++++|||+ .+++.. .++.|.++|..+++.+...
T Consensus 267 ~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 267 DQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred cCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 1 2479999999999999888778899999999999 887666 5788999999998887654
No 247
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.09 E-value=9e-08 Score=74.21 Aligned_cols=145 Identities=20% Similarity=0.372 Sum_probs=102.6
Q ss_pred EEEEEEcCCCCEEEEEeC----CCcEEEEeCCC--CcEE--EEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCC
Q psy10953 14 MWNVVFSPDDKYVLSGSQ----SGKINLYGVET--GKLE--QIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANT 84 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~----d~~i~~~d~~~--~~~~--~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~ 84 (181)
...++++|++++|.+.+. ++.|..|++.. +++. ......+.....++++|++++|+++.. +|.+.++++..
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~ 118 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD 118 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence 456889999999988766 56899998875 4443 223334444557899999999998875 88999998753
Q ss_pred -C---------------------CcccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCc--e--ee--eeecCCcEEEEE
Q psy10953 85 -G---------------------HSSWVLSTAFTRDGKFFISASA-DHTVRVWNFARRE--N--MH--TFKHADQVWCVC 135 (181)
Q Consensus 85 -~---------------------~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~--~--~~--~~~~~~~v~~~~ 135 (181)
+ .......+.++|+|+++++... ...|++|++.... . .. ..+.....+.++
T Consensus 119 ~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~ 198 (345)
T PF10282_consen 119 DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLA 198 (345)
T ss_dssp TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEE
T ss_pred CcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEE
Confidence 1 1133567899999998877664 4579999987654 2 12 223456789999
Q ss_pred EccCCCEEEEEcC-CCcEEEEeCC
Q psy10953 136 VAPDGDKFVSVGE-DKAVHMYSYK 158 (181)
Q Consensus 136 ~sp~g~~l~~~~~-d~~v~i~~~~ 158 (181)
|+|+++++++..+ ++.|.++++.
T Consensus 199 f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 199 FSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp E-TTSSEEEEEETTTTEEEEEEEE
T ss_pred EcCCcCEEEEecCCCCcEEEEeec
Confidence 9999999877665 7889999987
No 248
>KOG2111|consensus
Probab=99.08 E-value=2.5e-08 Score=73.92 Aligned_cols=140 Identities=20% Similarity=0.347 Sum_probs=95.1
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCc-EEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGK-INLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~-i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
-+..+..++.+++++.+|.++||++..|| ||+||..+|..++.+.. ....+++++|||+..+|++++.-|+++++.+
T Consensus 176 ~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l 255 (346)
T KOG2111|consen 176 IINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSL 255 (346)
T ss_pred EEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEe
Confidence 34557778899999999999999999998 89999999999988764 2345789999999999999999999999998
Q ss_pred CCCCcccE--EEEEEcC--CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 83 NTGHSSWV--LSTAFTR--DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 83 ~~~~~~~v--~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+......- .++++-. -.+++ + +.-.+..++ ..+...-++|-.+.+.++..+.|+..+-+.+
T Consensus 256 ~~~~~~~~~~SSl~~~~~~lpky~------------~--S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f 321 (346)
T KOG2111|consen 256 RDTENTEDESSSLSFKRLVLPKYF------------S--SEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKF 321 (346)
T ss_pred ecCCCCccccccccccccccchhc------------c--cceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEe
Confidence 75442211 1111000 00111 0 111223333 2334555777777566777777887766555
Q ss_pred CC
Q psy10953 158 KP 159 (181)
Q Consensus 158 ~~ 159 (181)
.+
T Consensus 322 ~~ 323 (346)
T KOG2111|consen 322 DP 323 (346)
T ss_pred cc
Confidence 43
No 249
>KOG0322|consensus
Probab=99.07 E-value=6.2e-10 Score=80.53 Aligned_cols=109 Identities=20% Similarity=0.346 Sum_probs=85.4
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CcEE--EEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET--GKLE--QIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~--~~~~--~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
.-++..+.++.+.+.-..=++|+.+..+..|.+.. +.+. ........-+..+.+-||++.++++++|+.+++|.-+
T Consensus 202 ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswr 281 (323)
T KOG0322|consen 202 ASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWR 281 (323)
T ss_pred hhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEec
Confidence 33555677788877666667888899999998863 3321 1122233334578999999999999999999999865
Q ss_pred C--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy10953 84 T--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 116 (181)
+ .|...|++++|+|+...++.++.|+.|.+|++
T Consensus 282 tl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 282 TLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred cCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 3 58888999999999999999999999999986
No 250
>KOG1587|consensus
Probab=99.07 E-value=9.6e-09 Score=83.21 Aligned_cols=149 Identities=15% Similarity=0.200 Sum_probs=109.0
Q ss_pred eeeEEEEEEcC-CCCEEEEEeCCCcEEEEe---CCCCc-----EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 11 PVDMWNVVFSP-DDKYVLSGSQSGKINLYG---VETGK-----LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 11 ~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d---~~~~~-----~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
.....+++|.| +-..++.|+.+|.|.-=+ .+... ....+..|...+..+.++|-+..++..+.|-.|++|.
T Consensus 347 ~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs 426 (555)
T KOG1587|consen 347 AVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWS 426 (555)
T ss_pred ccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEecc
Confidence 34467888987 556788999999987632 22222 1223445666788999999887776666699999998
Q ss_pred CC-C--------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCC--ceeeeee-cCCcEEEEEEccCCCEEEEEcC
Q psy10953 82 AN-T--------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARR--ENMHTFK-HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 82 ~~-~--------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~--~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
-. . .+..++.+++|||-.- .++++..||++.+||+... .++.+.. .....+.+.++++|+.+++|..
T Consensus 427 ~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~ 506 (555)
T KOG1587|consen 427 EDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDA 506 (555)
T ss_pred ccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecC
Confidence 65 2 2345689999999764 7778888999999999753 3444443 3334567788888999999999
Q ss_pred CCcEEEEeCCC
Q psy10953 149 DKAVHMYSYKP 159 (181)
Q Consensus 149 d~~v~i~~~~~ 159 (181)
.|.+++|++..
T Consensus 507 ~G~~~~~~l~~ 517 (555)
T KOG1587|consen 507 NGTTHILKLSE 517 (555)
T ss_pred CCcEEEEEcCc
Confidence 99999999954
No 251
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.06 E-value=7.4e-08 Score=72.55 Aligned_cols=151 Identities=17% Similarity=0.352 Sum_probs=108.8
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCC--CcEEE--EEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEe
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQS---GKINLYGVET--GKLEQ--IFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFD 81 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d---~~i~~~d~~~--~~~~~--~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d 81 (181)
....+.-++|+|++++|.++..+ +.|--|.++. |++.. .....+.....++++++|++++++.. -|.|.++-
T Consensus 38 ~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p 117 (346)
T COG2706 38 ELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYP 117 (346)
T ss_pred ccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEE
Confidence 34446789999999999887654 6787787764 55432 22223444357999999999988765 46788886
Q ss_pred CCC-C----------Cc----------ccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCceee----eeecCCcEEEEE
Q psy10953 82 ANT-G----------HS----------SWVLSTAFTRDGKFFISASA-DHTVRVWNFARRENMH----TFKHADQVWCVC 135 (181)
Q Consensus 82 ~~~-~----------~~----------~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~----~~~~~~~v~~~~ 135 (181)
++. + |. ..+-...++|+++++++.+- ...|.+|++..+.... .++.....+.++
T Consensus 118 ~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~ 197 (346)
T COG2706 118 LQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIV 197 (346)
T ss_pred cccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEE
Confidence 642 1 11 22667889999999888774 3579999998765332 223455688999
Q ss_pred EccCCCEEEEEcC-CCcEEEEeCCCC
Q psy10953 136 VAPDGDKFVSVGE-DKAVHMYSYKPE 160 (181)
Q Consensus 136 ~sp~g~~l~~~~~-d~~v~i~~~~~~ 160 (181)
|+|++++.++..+ +++|-+|.+...
T Consensus 198 FHpn~k~aY~v~EL~stV~v~~y~~~ 223 (346)
T COG2706 198 FHPNGKYAYLVNELNSTVDVLEYNPA 223 (346)
T ss_pred EcCCCcEEEEEeccCCEEEEEEEcCC
Confidence 9999999888776 899999998773
No 252
>KOG1354|consensus
Probab=99.02 E-value=1.7e-08 Score=75.69 Aligned_cols=151 Identities=16% Similarity=0.317 Sum_probs=110.6
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEecC-------CceEEEEEECCC-CCEEEEeeCCCcEEE
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDTR-------GKFTLSIAYSTD-GHWIASGALDGIINI 79 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~-------~~~~~~~~~s~d-~~~l~~~~~d~~v~i 79 (181)
.++..+.+|++..|+..++++ +|-.|.+|.++ +.+........ ...+.+..|+|. .++|+..++-|.+++
T Consensus 162 aHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrL 240 (433)
T KOG1354|consen 162 AHTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRL 240 (433)
T ss_pred cceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEE
Confidence 366778899999999988877 48899999886 33333333322 234567899995 578888999999999
Q ss_pred EeCCC-----CC-------------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-Cceeeeee-c------
Q psy10953 80 FDANT-----GH-------------------SSWVLSTAFTRDGKFFISASADHTVRVWNFAR-RENMHTFK-H------ 127 (181)
Q Consensus 80 ~d~~~-----~~-------------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~------ 127 (181)
.|.+. .| ...|..+.|+++|+++++-+. -+|++||+.. .+++.+++ |
T Consensus 241 cDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~k 319 (433)
T KOG1354|consen 241 CDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSK 319 (433)
T ss_pred eechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHH
Confidence 99872 11 135788999999999987664 4899999843 34444443 2
Q ss_pred ------CCcE---EEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 128 ------ADQV---WCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 128 ------~~~v---~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
.+.| -.++|+-++..+++|+..+.+++++...|.
T Consensus 320 Lc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 320 LCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred HHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 1222 247889999999999999999999965543
No 253
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.02 E-value=5.6e-08 Score=75.81 Aligned_cols=136 Identities=12% Similarity=0.196 Sum_probs=108.9
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC---
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSG-KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH--- 86 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--- 86 (181)
+..+.-..+..+++-++.|..|| .+-++|.++++.......- ..+..+..+++|+.++.+.....+-++|+.++.
T Consensus 359 ~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~l-g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~ 437 (668)
T COG4946 359 KGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDL-GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRL 437 (668)
T ss_pred CCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCc-cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeE
Confidence 34466777788888889999998 8999999998876654333 346789999999999999888899999987653
Q ss_pred -----cccEEEEEEcCCCCEEEEEeCCC----cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc
Q psy10953 87 -----SSWVLSTAFTRDGKFFISASADH----TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
..-|+...|+|+++++|-+-.+| .|+++|+..++..........-.+-+|.||+++|.--+
T Consensus 438 idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 438 IDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred ecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence 34588999999999999877764 79999999988776555555566789999999886655
No 254
>KOG2315|consensus
Probab=99.00 E-value=9.2e-08 Score=75.60 Aligned_cols=146 Identities=17% Similarity=0.290 Sum_probs=102.0
Q ss_pred eeeEEEEEEcCCCCEEE---EEeCCC---------cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE--eeCCCc
Q psy10953 11 PVDMWNVVFSPDDKYVL---SGSQSG---------KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS--GALDGI 76 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~---~~~~d~---------~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~--~~~d~~ 76 (181)
..+.-.+.|.+-|.-|+ +..-|+ ++++.++++.....-+.. ...|.++.|+|+++-|++ |--=..
T Consensus 217 kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k-~GPVhdv~W~~s~~EF~VvyGfMPAk 295 (566)
T KOG2315|consen 217 KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLK-EGPVHDVTWSPSGREFAVVYGFMPAK 295 (566)
T ss_pred ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCC-CCCceEEEECCCCCEEEEEEecccce
Confidence 34445677887777432 333333 688888774443333332 445779999999988765 333457
Q ss_pred EEEEeCCCC-----CcccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc-
Q psy10953 77 INIFDANTG-----HSSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG- 147 (181)
Q Consensus 77 v~i~d~~~~-----~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~- 147 (181)
+.++|++.. -.+.=+.+-|+|.|++++-++.+ |.+-+||..+.+.+..+.-.+.. -..|+|||++|+++.
T Consensus 296 vtifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt-~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 296 VTIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTT-VFEWSPDGEYFLTATT 374 (566)
T ss_pred EEEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCce-EEEEcCCCcEEEEEec
Confidence 889988642 12333667899999998888764 89999999998888777654433 468999999998876
Q ss_pred -----CCCcEEEEeCC
Q psy10953 148 -----EDKAVHMYSYK 158 (181)
Q Consensus 148 -----~d~~v~i~~~~ 158 (181)
.|+.++||++.
T Consensus 375 aPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 375 APRLRVDNGIKIWHYT 390 (566)
T ss_pred cccEEecCCeEEEEec
Confidence 37889999984
No 255
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.97 E-value=3e-07 Score=67.45 Aligned_cols=145 Identities=10% Similarity=0.245 Sum_probs=94.8
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC------CceEEEEEECCC------CCEEEEeeCCCcEEEEeC
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR------GKFTLSIAYSTD------GHWIASGALDGIINIFDA 82 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s~d------~~~l~~~~~d~~v~i~d~ 82 (181)
+.++||||+..||.+...|+|++||+....+...-... ...+.++.|-+- ...|++....|.++-|-+
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~v 126 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLV 126 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEE
Confidence 67999999999999999999999999865443211111 233445555331 123555667776666654
Q ss_pred CC----------------CCcccEEEEEEcCCCCEEEEEeCC-C----------cEEEEecCCCc---------------
Q psy10953 83 NT----------------GHSSWVLSTAFTRDGKFFISASAD-H----------TVRVWNFARRE--------------- 120 (181)
Q Consensus 83 ~~----------------~~~~~v~~~~~s~~~~~l~~~~~d-~----------~i~v~d~~~~~--------------- 120 (181)
.. .+...|.++.++|..++|+.++.. . =+.-|.+-++.
T Consensus 127 s~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~ 206 (282)
T PF15492_consen 127 SVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITA 206 (282)
T ss_pred EcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccc
Confidence 21 124468899999998877766542 1 13444321100
Q ss_pred --------eeee---e----ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 121 --------NMHT---F----KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 121 --------~~~~---~----~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.+.. + ...+.|..+.+||||+.|++..-+|.|.+|++..
T Consensus 207 ~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 207 SSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPS 260 (282)
T ss_pred cccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCc
Confidence 0001 1 1345688999999999999999999999999965
No 256
>KOG0280|consensus
Probab=98.95 E-value=5.5e-08 Score=71.53 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=102.4
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE--EEecCCceEEEEEECCC-CCEEEEeeCCCcEEEEeCCC---
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ--IFDTRGKFTLSIAYSTD-GHWIASGALDGIINIFDANT--- 84 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~v~i~d~~~--- 84 (181)
.....++.|++-+..++++-.+|.+.+-+.....+.. .+..|.-......|+.. .+.+.+|+.|+.+.-||++.
T Consensus 121 ~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~ 200 (339)
T KOG0280|consen 121 VVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT 200 (339)
T ss_pred heeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc
Confidence 3345788999999999999999998866555444443 45555555556677654 36778899999999999983
Q ss_pred -------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCC-CceeeeeecCCcEEEEEEccCC--CEEEEEcCC
Q psy10953 85 -------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFAR-RENMHTFKHADQVWCVCVAPDG--DKFVSVGED 149 (181)
Q Consensus 85 -------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~v~~~~~sp~g--~~l~~~~~d 149 (181)
.|...|.++.-+| .+.++++|+.|..|++||.+. ++++..-...+.||.+..+|.- +.++++..+
T Consensus 201 ~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~ 276 (339)
T KOG0280|consen 201 FIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHN 276 (339)
T ss_pred eeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhc
Confidence 2455677776666 467999999999999999984 6677666677899999999853 344444443
No 257
>KOG1064|consensus
Probab=98.95 E-value=5.2e-09 Score=91.90 Aligned_cols=139 Identities=20% Similarity=0.353 Sum_probs=109.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-eEEEEEECCCCCEEEEeeCCCcEEEEeCC---------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-FTLSIAYSTDGHWIASGALDGIINIFDAN--------- 83 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~~~~d~~v~i~d~~--------- 83 (181)
+..+.=+|-..+.++|++||.+++|.-..++.+..+...+. .+..+.|+.+|+.+..+..||.+.+|.+.
T Consensus 2211 v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qc 2290 (2439)
T KOG1064|consen 2211 VRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQC 2290 (2439)
T ss_pred eeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceecccc
Confidence 55666688888899999999999999887877766665332 24457788888888888888888888642
Q ss_pred ------------------------------------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce
Q psy10953 84 ------------------------------------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN 121 (181)
Q Consensus 84 ------------------------------------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 121 (181)
+.|...++.+++-|..++|++|+.+|.|++||++..+.
T Consensus 2291 hnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql 2370 (2439)
T KOG1064|consen 2291 HNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQL 2370 (2439)
T ss_pred CCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHH
Confidence 12445677889999999999999999999999988877
Q ss_pred eeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 122 MHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 122 ~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
++.++. ++ ...+|++++.+|.++||++..-.
T Consensus 2371 ~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2371 RHTFQA--------LD-TREYFVTGSSEGNIKIWRLSEFG 2401 (2439)
T ss_pred HHHhhh--------hh-hhheeeccCcccceEEEEccccc
Confidence 766654 23 46688999999999999986543
No 258
>KOG4547|consensus
Probab=98.93 E-value=1.1e-07 Score=75.36 Aligned_cols=136 Identities=20% Similarity=0.277 Sum_probs=109.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC--------CcccEE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDANTG--------HSSWVL 91 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~--------~~~~v~ 91 (181)
|-..++-|...|.|.+|++..+++...+.. |...+.++.++.+-..|.+++.|..+.+|+...+ -...+.
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~ 148 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVS 148 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccc
Confidence 445677888899999999999999887764 4445667777777788999999999999998653 234567
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccC-----CCEEEEEc-CCCcEEEEeCCC
Q psy10953 92 STAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPD-----GDKFVSVG-EDKAVHMYSYKP 159 (181)
Q Consensus 92 ~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~-----g~~l~~~~-~d~~v~i~~~~~ 159 (181)
.+.++|||+.+++++ +.|++||+.+++.+..|. |.++|+++.|.-+ |.++.++. .+..+.+|-.+.
T Consensus 149 sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 149 SLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred eEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 788999999998887 689999999999998887 8889999999877 77766555 466777777643
No 259
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.93 E-value=1.5e-07 Score=73.55 Aligned_cols=81 Identities=19% Similarity=0.345 Sum_probs=66.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC----cEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG----IINI 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~----~v~i 79 (181)
.-++..+...+..+..+|||+.++.+.+...+.+.|+.+++....-..+...+..+.|||+++++|.+--+| .+++
T Consensus 394 ~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Ikl 473 (668)
T COG4946 394 VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKL 473 (668)
T ss_pred EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEE
Confidence 345566667789999999999999999999999999999987655555566678999999999999886554 6788
Q ss_pred EeCCC
Q psy10953 80 FDANT 84 (181)
Q Consensus 80 ~d~~~ 84 (181)
+|...
T Consensus 474 ydm~~ 478 (668)
T COG4946 474 YDMDG 478 (668)
T ss_pred EecCC
Confidence 88754
No 260
>KOG4532|consensus
Probab=98.90 E-value=4.1e-07 Score=66.40 Aligned_cols=149 Identities=15% Similarity=0.190 Sum_probs=106.8
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-c-EEEEEe-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETG-K-LEQIFD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-~-~~~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
..+.++++++|++++++.++...|-+|.+... . .+.... ...+.-.+.+|+.....+|++..||.+.+||++.
T Consensus 159 ~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp 238 (344)
T KOG4532|consen 159 LTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP 238 (344)
T ss_pred cceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc
Confidence 44788999999999999999999999988643 2 223222 2222234789999999999999999999999862
Q ss_pred ---------CCcccEEEEEEcCCC--CEEEEEeCCCcEEEEecCCCceeeeee--------c-CCcEEEEEEccCCCEEE
Q psy10953 85 ---------GHSSWVLSTAFTRDG--KFFISASADHTVRVWNFARRENMHTFK--------H-ADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 85 ---------~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~--------~-~~~v~~~~~sp~g~~l~ 144 (181)
.|.+.++.+.|++-| .+|+-...-+.+.+.|+++......+. | ...+.+.+|+.++..+.
T Consensus 239 m~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~ 318 (344)
T KOG4532|consen 239 MAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESND 318 (344)
T ss_pred hhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccc
Confidence 367889999999876 366666667889999999875433321 2 23477788888877776
Q ss_pred EEcCCCcEEEEeCCCCe
Q psy10953 145 SVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~ 161 (181)
+..++ .+.=|++....
T Consensus 319 v~~e~-~~ae~ni~srs 334 (344)
T KOG4532|consen 319 VKNEL-QGAEYNILSRS 334 (344)
T ss_pred cccch-hhheeeccccc
Confidence 65543 34445554433
No 261
>KOG1240|consensus
Probab=98.89 E-value=3.3e-07 Score=78.46 Aligned_cols=156 Identities=13% Similarity=0.191 Sum_probs=110.6
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE--EE-----EEe--cCCceEEEEEECC-CCC-EEEEeeCCCcEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL--EQ-----IFD--TRGKFTLSIAYST-DGH-WIASGALDGIINIFD 81 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~--~~-----~~~--~~~~~~~~~~~s~-d~~-~l~~~~~d~~v~i~d 81 (181)
.+..+.+.+++..+|.++.||.|++.++.-.+. .. ... ..+..+..-++.. ++. .++.+...+.+..||
T Consensus 1100 r~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D 1179 (1431)
T KOG1240|consen 1100 RVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWD 1179 (1431)
T ss_pred ceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEec
Confidence 356788888999999999999999999875221 11 111 1123232223322 233 677788889999999
Q ss_pred CCCCC----------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC--CcEEEEEEccC---CCEEEEE
Q psy10953 82 ANTGH----------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA--DQVWCVCVAPD---GDKFVSV 146 (181)
Q Consensus 82 ~~~~~----------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~v~~~~~sp~---g~~l~~~ 146 (181)
+++.| .+.|++++.+|.+++++.|+..|.+.+||++-+.++..+.|+ .+++.++..|- ....+++
T Consensus 1180 ~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~ 1259 (1431)
T KOG1240|consen 1180 TRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSA 1259 (1431)
T ss_pred chhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEe
Confidence 97543 467999999999999999999999999999988888887654 45666665553 3455544
Q ss_pred c--CCCcEEEEeCCCCeeEEEcCC
Q psy10953 147 G--EDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 147 ~--~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+ ..+.|-+|++.+|....+.--
T Consensus 1260 ~~~~~nevs~wn~~~g~~~~vl~~ 1283 (1431)
T KOG1240|consen 1260 GSSSNNEVSTWNMETGLRQTVLWA 1283 (1431)
T ss_pred cccCCCceeeeecccCcceEEEEc
Confidence 4 478999999998865544433
No 262
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.87 E-value=9.7e-07 Score=77.34 Aligned_cols=154 Identities=10% Similarity=0.139 Sum_probs=104.8
Q ss_pred EEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCcEEEEEec-------CC---------ceEEEEEECC-CCCEEEEeeCCC
Q psy10953 14 MWNVVFSPDDKYVLSGS-QSGKINLYGVETGKLEQIFDT-------RG---------KFTLSIAYST-DGHWIASGALDG 75 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~-~d~~i~~~d~~~~~~~~~~~~-------~~---------~~~~~~~~s~-d~~~l~~~~~d~ 75 (181)
...++++++++.|+.+. ..+.|+.+|..++........ .+ .....++++| ++..+++...++
T Consensus 626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~ 705 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQH 705 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCC
Confidence 47899999988766554 456799999887664332110 00 1124789999 556666777788
Q ss_pred cEEEEeCCCCC----------------------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeee-------
Q psy10953 76 IINIFDANTGH----------------------SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTF------- 125 (181)
Q Consensus 76 ~v~i~d~~~~~----------------------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~------- 125 (181)
.|++||...+. -.....++++|+|+ ++++-+.++.|++||+.++......
T Consensus 706 ~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~ 785 (1057)
T PLN02919 706 QIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFS 785 (1057)
T ss_pred eEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccC
Confidence 99999875421 01345689999998 5556666789999998865422110
Q ss_pred ------e---------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 126 ------K---------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 126 ------~---------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
. .-....+++++++|+.+++-..++.|++|+..++....+.+
T Consensus 786 ~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG 842 (1057)
T PLN02919 786 DNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAG 842 (1057)
T ss_pred cccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEec
Confidence 0 01134689999999988888889999999998776554443
No 263
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.84 E-value=1.9e-06 Score=64.76 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=103.2
Q ss_pred eeccCeeeEE--EEEEcCCCCEEEEEeCC-----CcEEEEeCC-CCcEEEEEecCCceEEEEEECCCCCEEEEeeC----
Q psy10953 6 KINVGPVDMW--NVVFSPDDKYVLSGSQS-----GKINLYGVE-TGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---- 73 (181)
Q Consensus 6 ~~~~~~~~~~--~~~~s~~g~~l~~~~~d-----~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---- 73 (181)
.+..++.-.+ .-.|||||++|++.-.| |.|-+||.. +.+.+..+..++--.-.+.+.|||+.|+.+..
T Consensus 43 ~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~T 122 (305)
T PF07433_consen 43 RLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIET 122 (305)
T ss_pred EEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCcc
Confidence 3444444333 36799999999987554 689999998 55666777766544446889999988876532
Q ss_pred --------------CCcEEEEeCCCC------------CcccEEEEEEcCCCCEEEEEeCCCc-------EEEEecCCCc
Q psy10953 74 --------------DGIINIFDANTG------------HSSWVLSTAFTRDGKFFISASADHT-------VRVWNFARRE 120 (181)
Q Consensus 74 --------------d~~v~i~d~~~~------------~~~~v~~~~~s~~~~~l~~~~~d~~-------i~v~d~~~~~ 120 (181)
+..+.+.|..++ |..+++.+++.++|..++..-..+. +.+++. +.
T Consensus 123 hpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~ 200 (305)
T PF07433_consen 123 HPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GG 200 (305)
T ss_pred CcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CC
Confidence 123444444432 4457889999999887655443332 333332 22
Q ss_pred eeeeee--------cCCcEEEEEEccCCCEEEEEcC-CCcEEEEeCCCCeeEE
Q psy10953 121 NMHTFK--------HADQVWCVCVAPDGDKFVSVGE-DKAVHMYSYKPEEEVE 164 (181)
Q Consensus 121 ~~~~~~--------~~~~v~~~~~sp~g~~l~~~~~-d~~v~i~~~~~~~~~~ 164 (181)
.+..+. ..+.+-+++++++|..+++.|- .+.+.+|+..++..+.
T Consensus 201 ~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~ 253 (305)
T PF07433_consen 201 ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLG 253 (305)
T ss_pred cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEee
Confidence 222221 2356889999999999988885 5789999988876543
No 264
>KOG2695|consensus
Probab=98.84 E-value=1.6e-08 Score=75.87 Aligned_cols=147 Identities=18% Similarity=0.313 Sum_probs=107.1
Q ss_pred EEEEEcCC--CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-------
Q psy10953 15 WNVVFSPD--DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------- 85 (181)
Q Consensus 15 ~~~~~s~~--g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------- 85 (181)
|.++|+-+ |-. ++.+.+..+-+-++++|-. +.|...++ +....|.-.+..+..|..+|.|..+|++..
T Consensus 215 ~~CawSlni~gyh-fs~G~sqqv~L~nvetg~~-qsf~sksD-VfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~ 291 (425)
T KOG2695|consen 215 WSCAWSLNIMGYH-FSVGLSQQVLLTNVETGHQ-QSFQSKSD-VFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWC 291 (425)
T ss_pred hhhhhhhccceee-ecccccceeEEEEeecccc-cccccchh-HHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcc
Confidence 55566633 223 4566678888999987754 33443333 457788887888999999999999999753
Q ss_pred -----CcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCce---eeeeecCCcEEE-----EEEccCCCEEEEEcCCCc
Q psy10953 86 -----HSSWVLSTAFTR-DGKFFISASADHTVRVWNFARREN---MHTFKHADQVWC-----VCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 86 -----~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~v~~-----~~~sp~g~~l~~~~~d~~ 151 (181)
|.+.|++++.-. ++++|.+.+.+|+|++||++.-+. +.++. +.|+. +-+.+....+++++.|.-
T Consensus 292 a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe--GHvN~~a~l~~~v~~eeg~I~s~GdDcy 369 (425)
T KOG2695|consen 292 AQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE--GHVNLSAYLPAHVKEEEGSIFSVGDDCY 369 (425)
T ss_pred eEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeee--cccccccccccccccccceEEEccCeeE
Confidence 456677777666 678899999999999999987554 44443 33332 334667788999999999
Q ss_pred EEEEeCCCCeeEEEc
Q psy10953 152 VHMYSYKPEEEVEVN 166 (181)
Q Consensus 152 v~i~~~~~~~~~~~~ 166 (181)
.++|.++.++.+...
T Consensus 370 tRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 370 TRIWSLDSGHLLCTI 384 (425)
T ss_pred EEEEecccCceeecc
Confidence 999999988776543
No 265
>KOG4532|consensus
Probab=98.81 E-value=9.8e-07 Score=64.47 Aligned_cols=139 Identities=12% Similarity=0.064 Sum_probs=96.2
Q ss_pred EEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-----------cccEEEEE
Q psy10953 26 VLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH-----------SSWVLSTA 94 (181)
Q Consensus 26 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~-----------~~~v~~~~ 94 (181)
+..++.|+++++.++..+......-...--..++.+++|++++++.+....|..|.+.... ...-.+..
T Consensus 131 ~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S 210 (344)
T KOG4532|consen 131 LNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNS 210 (344)
T ss_pred eeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeee
Confidence 4567888999988876544322211111124578999999999999988899999875321 11124567
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCceee-ee----e-cCCcEEEEEEccCCCE--EEEEcCCCcEEEEeCCCCeeEE
Q psy10953 95 FTRDGKFFISASADHTVRVWNFARRENMH-TF----K-HADQVWCVCVAPDGDK--FVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 95 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~----~-~~~~v~~~~~sp~g~~--l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
|+.....+|++..||++.|||++....+. .. + |.+.++.+.|+|.|-. |.-.-.-+.+++-|++.+....
T Consensus 211 ~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q 288 (344)
T KOG4532|consen 211 FSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQ 288 (344)
T ss_pred eccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceee
Confidence 88888999999999999999998643222 11 2 6678999999987653 3333345688999988775443
No 266
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.74 E-value=4e-08 Score=51.21 Aligned_cols=38 Identities=24% Similarity=0.498 Sum_probs=35.2
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYG 39 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d 39 (181)
+.+..+..+...+.+++|+|+++++++++.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 35678889999999999999999999999999999997
No 267
>KOG4497|consensus
Probab=98.74 E-value=1.5e-07 Score=70.49 Aligned_cols=116 Identities=18% Similarity=0.253 Sum_probs=77.9
Q ss_pred eeccCeeeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC----------
Q psy10953 6 KINVGPVDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD---------- 74 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d---------- 74 (181)
+++-++...+.++|||||+.+ .+...|-.|.+|.+.+.+...+ ......+...+|+|||+..+..+.-
T Consensus 86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~ 164 (447)
T KOG4497|consen 86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISS 164 (447)
T ss_pred EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHHh
Confidence 455567778899999999665 5777899999999987765432 2223334567888888766544321
Q ss_pred --------------------------CcEEEEeCCCC------Cc-ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce
Q psy10953 75 --------------------------GIINIFDANTG------HS-SWVLSTAFTRDGKFFISASADHTVRVWNFARREN 121 (181)
Q Consensus 75 --------------------------~~v~i~d~~~~------~~-~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 121 (181)
+.+.+||-.-. |. -.+..+.|+|.+++++.|+.|+.+++.|--+.+.
T Consensus 165 c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~ 244 (447)
T KOG4497|consen 165 CKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKP 244 (447)
T ss_pred hHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeee
Confidence 12334442211 11 2356689999999999999999999887554443
Q ss_pred e
Q psy10953 122 M 122 (181)
Q Consensus 122 ~ 122 (181)
+
T Consensus 245 f 245 (447)
T KOG4497|consen 245 F 245 (447)
T ss_pred h
Confidence 3
No 268
>KOG0280|consensus
Probab=98.72 E-value=4.7e-07 Score=66.75 Aligned_cols=156 Identities=13% Similarity=0.228 Sum_probs=95.8
Q ss_pred eeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCC-CCcEEEE-EecCCceEEEEEECC-CCCEEEEeeCCCcEEE
Q psy10953 4 ISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVE-TGKLEQI-FDTRGKFTLSIAYST-DGHWIASGALDGIINI 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~-~~~~~~~-~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i 79 (181)
-+....++.+.|-+.|+. +.+++.+|++|+.+..||++ .++.+.. -..|..-+.++.-+| ++.++++|+.|-.+++
T Consensus 158 vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~ 237 (339)
T KOG0280|consen 158 VQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRV 237 (339)
T ss_pred cccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceee
Confidence 345666888899999985 44677899999999999998 4443321 112333344554444 6789999999999999
Q ss_pred EeCCC-C-------CcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCcee--eeee----cCCcEEEEEEccCCCEE
Q psy10953 80 FDANT-G-------HSSWVLSTAFTRD--GKFFISASADHTVRVWNFARRENM--HTFK----HADQVWCVCVAPDGDKF 143 (181)
Q Consensus 80 ~d~~~-~-------~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~~--~~~~----~~~~v~~~~~sp~g~~l 143 (181)
||.+. + -.+.|..+..+|. +++|+++..+| .++.+......- ..+. |.+-.++..+.....++
T Consensus 238 ~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~l 316 (339)
T KOG0280|consen 238 LDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFL 316 (339)
T ss_pred eehhcccCccccCccccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeecccccccccee
Confidence 99873 1 2356777888885 34555555554 455555433211 1111 22223333343333567
Q ss_pred EEEc-CCCcEE-EEeCCCC
Q psy10953 144 VSVG-EDKAVH-MYSYKPE 160 (181)
Q Consensus 144 ~~~~-~d~~v~-i~~~~~~ 160 (181)
++++ .|+.++ +|=--++
T Consensus 317 ATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 317 ATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred eeeeccccceeeeeeeccC
Confidence 8776 477744 6654333
No 269
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.70 E-value=7.7e-08 Score=50.10 Aligned_cols=37 Identities=22% Similarity=0.513 Sum_probs=32.6
Q ss_pred ceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 120 ENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 120 ~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+++.++. |.+.|++++|+|++++|++++.|+.|++|+
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 3455565 788999999999999999999999999997
No 270
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.67 E-value=3.3e-06 Score=67.61 Aligned_cols=73 Identities=16% Similarity=0.196 Sum_probs=61.3
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 87 SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 87 ~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
...|.+++++|+.+.++.|+.||.|.+||...+..... +..-.+..++|+|+|..+++|+..|.+++||+...
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred CCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 34678899999999999999999999999877643322 44456788999999999999999999999998543
No 271
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.66 E-value=1.2e-05 Score=60.96 Aligned_cols=146 Identities=14% Similarity=0.368 Sum_probs=102.0
Q ss_pred EEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcEEEEEe---cCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCCC---
Q psy10953 14 MWNVVFSPDDKYVLSGSQ-SGKINLYGVETGKLEQIFD---TRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANTG--- 85 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~~--- 85 (181)
+....|.|++++|++.+- ..+|.+|++..|++...-. ..+.-.+-+.|+|+++....... +++|.+|.....
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~ 226 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGK 226 (346)
T ss_pred cceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCce
Confidence 567889999999987653 3489999999887754222 22332346899999998776544 788999876542
Q ss_pred ---------------CcccEEEEEEcCCCCEEEEEeCC-CcEEEEecCCC-ceeeee---e-cCCcEEEEEEccCCCEEE
Q psy10953 86 ---------------HSSWVLSTAFTRDGKFFISASAD-HTVRVWNFARR-ENMHTF---K-HADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 86 ---------------~~~~v~~~~~s~~~~~l~~~~~d-~~i~v~d~~~~-~~~~~~---~-~~~~v~~~~~sp~g~~l~ 144 (181)
...+..++.++|+|++|.++... ..|.+|.+... ..+... . +....+...|+|+|++|+
T Consensus 227 ~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Li 306 (346)
T COG2706 227 FEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLI 306 (346)
T ss_pred EEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEE
Confidence 12356678999999999887753 35777765432 222222 2 333478899999999999
Q ss_pred EEcCC-CcEEEEeCCC
Q psy10953 145 SVGED-KAVHMYSYKP 159 (181)
Q Consensus 145 ~~~~d-~~v~i~~~~~ 159 (181)
++.++ ..|.+|.+..
T Consensus 307 aa~q~sd~i~vf~~d~ 322 (346)
T COG2706 307 AANQKSDNITVFERDK 322 (346)
T ss_pred EEccCCCcEEEEEEcC
Confidence 99975 4788888754
No 272
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.66 E-value=5.2e-06 Score=67.88 Aligned_cols=114 Identities=18% Similarity=0.246 Sum_probs=74.7
Q ss_pred CcEEEEeCCC-----CcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCCc-------------------
Q psy10953 33 GKINLYGVET-----GKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANTGHS------------------- 87 (181)
Q Consensus 33 ~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~~------------------- 87 (181)
++|.+.|.++ .+....+..... ...+.++|||+++++ +..+++|.++|+.+...
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVGKs-PHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVPKN-PHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECCCC-ccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 4577777776 344444443333 358999999998876 55689999999865221
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC----------CceeeeeecCCcEEEEE------EccCCCEEEEEc
Q psy10953 88 SWVLSTAFTRDGKFFISASADHTVRVWNFAR----------RENMHTFKHADQVWCVC------VAPDGDKFVSVG 147 (181)
Q Consensus 88 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~----------~~~~~~~~~~~~v~~~~------~sp~g~~l~~~~ 147 (181)
......+|+++|+.+.+.-.|..|..||+.. ...+..+.-...+-.+. -.|||++|++..
T Consensus 375 lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 375 LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN 450 (635)
T ss_pred CCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence 1235678999999888888999999999865 22222232111122222 268888888755
No 273
>KOG1334|consensus
Probab=98.65 E-value=1.3e-07 Score=73.72 Aligned_cols=155 Identities=18% Similarity=0.255 Sum_probs=117.8
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCC--CCEEEEeeCCCcEEEEe
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTD--GHWIASGALDGIINIFD 81 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d--~~~l~~~~~d~~v~i~d 81 (181)
.+|..++.-+..+.|...|..|++|++|..|.+||=..++....+.. |...+....|-|. .+.+++.+.||.|++=.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 35666777788999999999999999999999999877776555432 3333445566663 46789999999998876
Q ss_pred CC-----------CCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeee----ecCC---cEEEEEEccCCC-
Q psy10953 82 AN-----------TGHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTF----KHAD---QVWCVCVAPDGD- 141 (181)
Q Consensus 82 ~~-----------~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~----~~~~---~v~~~~~sp~g~- 141 (181)
+. ..|.+.|..++..|+. ..|.+++.|+.+.=+|++...+...+ .+.. ..++++..|...
T Consensus 216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~ 295 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN 295 (559)
T ss_pred eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence 52 2467888899999975 57889999999999999876433322 2333 467888899766
Q ss_pred EEEEEcCCCcEEEEeCCC
Q psy10953 142 KFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~ 159 (181)
.+++++.|..+++|+...
T Consensus 296 ~faVgG~dqf~RvYD~R~ 313 (559)
T KOG1334|consen 296 EFAVGGSDQFARVYDQRR 313 (559)
T ss_pred ccccCChhhhhhhhcccc
Confidence 688899999999999753
No 274
>KOG2041|consensus
Probab=98.65 E-value=5.7e-07 Score=73.56 Aligned_cols=150 Identities=14% Similarity=0.213 Sum_probs=114.6
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE---------------EEEEecCCceEEEEEECCCCCEEEEeeCC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL---------------EQIFDTRGKFTLSIAYSTDGHWIASGALD 74 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~---------------~~~~~~~~~~~~~~~~s~d~~~l~~~~~d 74 (181)
+..+..+++|..+..+++.|+.||.+++..+.+... -+.+..|...+.-+.|..+.+.|-+...+
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 445678999999999999999999999997754321 13445566677788999999999999999
Q ss_pred CcEEEEeCCCC----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEE
Q psy10953 75 GIINIFDANTG----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 75 ~~v~i~d~~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 144 (181)
|.+.+|-+.++ .++.|.++.|..+|+.+.-.=.||.|-+=.+...+....--.......+-+|+|.+.+.
T Consensus 93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~L 172 (1189)
T KOG2041|consen 93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQAL 172 (1189)
T ss_pred ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHHH
Confidence 99999987543 45678999999999998888888888777665433221111122344677899999888
Q ss_pred EEcCCCcEEEEeCCC
Q psy10953 145 SVGEDKAVHMYSYKP 159 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~ 159 (181)
.+-.+|.+++|+...
T Consensus 173 f~~ange~hlydnqg 187 (1189)
T KOG2041|consen 173 FKKANGETHLYDNQG 187 (1189)
T ss_pred hhhcCCcEEEecccc
Confidence 888899999999753
No 275
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.64 E-value=2.9e-05 Score=57.29 Aligned_cols=137 Identities=19% Similarity=0.295 Sum_probs=91.8
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEEC-CCCCEEEEeeCCCcEEEEeCCCC--------
Q psy10953 16 NVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYS-TDGHWIASGALDGIINIFDANTG-------- 85 (181)
Q Consensus 16 ~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s-~d~~~l~~~~~d~~v~i~d~~~~-------- 85 (181)
++.|.+ +|.++++--..+.|..|+..+++... +.... ..++.+. +++++++ +...+ +.++|..++
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v-~~~~~-~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYV-ADSGG-IAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEE-EETTC-EEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEE-EEcCc-eEEEecCCCcEEEEeec
Confidence 456887 77777777788999999998876543 33333 3477777 6655444 44444 344476543
Q ss_pred -----CcccEEEEEEcCCCCEEEEEeCC--------CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEE-EEcCCCc
Q psy10953 86 -----HSSWVLSTAFTRDGKFFISASAD--------HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFV-SVGEDKA 151 (181)
Q Consensus 86 -----~~~~v~~~~~s~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~d~~ 151 (181)
.....+.++++|+|++.++.... +.++.++.. ++.......-...+.++|+|+++.|+ +-+..+.
T Consensus 79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~ 157 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGR 157 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTE
T ss_pred cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccce
Confidence 23457889999999988877654 457777776 44333333445688999999999776 4556788
Q ss_pred EEEEeCC
Q psy10953 152 VHMYSYK 158 (181)
Q Consensus 152 v~i~~~~ 158 (181)
|..+++.
T Consensus 158 i~~~~~~ 164 (246)
T PF08450_consen 158 IWRFDLD 164 (246)
T ss_dssp EEEEEEE
T ss_pred eEEEecc
Confidence 9988885
No 276
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.63 E-value=7e-05 Score=55.27 Aligned_cols=146 Identities=18% Similarity=0.264 Sum_probs=96.0
Q ss_pred EEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-----CCceEEEEEECCCCCEEEEeeCC--------CcEEE
Q psy10953 14 MWNVVFS-PDDKYVLSGSQSGKINLYGVETGKLEQIFDT-----RGKFTLSIAYSTDGHWIASGALD--------GIINI 79 (181)
Q Consensus 14 ~~~~~~s-~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~s~d~~~l~~~~~d--------~~v~i 79 (181)
...+++. ++|+++ .+.. +.+.++|..+++....... .......++++|+|+..++-... +.++.
T Consensus 42 ~~G~~~~~~~g~l~-v~~~-~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~ 119 (246)
T PF08450_consen 42 PNGMAFDRPDGRLY-VADS-GGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYR 119 (246)
T ss_dssp EEEEEEECTTSEEE-EEET-TCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEE
T ss_pred CceEEEEccCCEEE-EEEc-CceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEE
Confidence 5677787 665554 4444 4556669999887766554 22345689999999977765433 45777
Q ss_pred EeCCCCC-------cccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCCce-------eeeeecC-CcEEEEEEccCCCEE
Q psy10953 80 FDANTGH-------SSWVLSTAFTRDGKFF-ISASADHTVRVWNFARREN-------MHTFKHA-DQVWCVCVAPDGDKF 143 (181)
Q Consensus 80 ~d~~~~~-------~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~~~-------~~~~~~~-~~v~~~~~sp~g~~l 143 (181)
++.. +. ....+.++|+|+++.| ++-+..+.|..|++..... +..+... +..-.+++.++|+..
T Consensus 120 ~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~ 198 (246)
T PF08450_consen 120 IDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLW 198 (246)
T ss_dssp EETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EE
T ss_pred ECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEE
Confidence 7776 22 2346789999999865 4666788899999853221 1112222 247789999999988
Q ss_pred EEEcCCCcEEEEeCCCCeeE
Q psy10953 144 VSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~~~~~ 163 (181)
++.-..+.|.+++.. |+.+
T Consensus 199 va~~~~~~I~~~~p~-G~~~ 217 (246)
T PF08450_consen 199 VADWGGGRIVVFDPD-GKLL 217 (246)
T ss_dssp EEEETTTEEEEEETT-SCEE
T ss_pred EEEcCCCEEEEECCC-ccEE
Confidence 877778899999987 5444
No 277
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.60 E-value=4.6e-06 Score=66.24 Aligned_cols=159 Identities=19% Similarity=0.209 Sum_probs=98.8
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeC---C-CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCc--EEEE
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQ---S-GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGI--INIF 80 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~---d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~--v~i~ 80 (181)
......+..-+|+|+++.++.... . ..+.++++.+++........+.. ....|+|||+.|+. ...|+. ++++
T Consensus 189 ~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~-~~P~fspDG~~l~f~~~rdg~~~iy~~ 267 (425)
T COG0823 189 TDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNN-GAPAFSPDGSKLAFSSSRDGSPDIYLM 267 (425)
T ss_pred cccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCcc-CCccCCCCCCEEEEEECCCCCccEEEE
Confidence 333444455679999998875532 2 35889999988877766644433 35799999988775 455554 5556
Q ss_pred eCCCCCcc-------cEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC-
Q psy10953 81 DANTGHSS-------WVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED- 149 (181)
Q Consensus 81 d~~~~~~~-------~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d- 149 (181)
|+..+... .-..-.|+|+|+.++..+. .| .|.++|...............-..-.+||||++|+..+..
T Consensus 268 dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~ 347 (425)
T COG0823 268 DLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSG 347 (425)
T ss_pred cCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccC
Confidence 66543211 1124579999998776664 44 4666676665543222222222267789999999887743
Q ss_pred Cc--EEEEeCCCCeeEEEcC
Q psy10953 150 KA--VHMYSYKPEEEVEVNG 167 (181)
Q Consensus 150 ~~--v~i~~~~~~~~~~~~~ 167 (181)
+. |.+.++.++...++..
T Consensus 348 g~~~i~~~~~~~~~~~~~lt 367 (425)
T COG0823 348 GQWDIDKNDLASGGKIRILT 367 (425)
T ss_pred CceeeEEeccCCCCcEEEcc
Confidence 43 6666665554333333
No 278
>KOG1275|consensus
Probab=98.59 E-value=2.6e-06 Score=71.33 Aligned_cols=137 Identities=10% Similarity=0.162 Sum_probs=103.6
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC---------CCcEEEEeCCCCC---
Q psy10953 19 FSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---------DGIINIFDANTGH--- 86 (181)
Q Consensus 19 ~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---------d~~v~i~d~~~~~--- 86 (181)
+-.+++.+.+|...|+|.+-|.++-+.++.+..|...+ ..|+-.|+.|++.+. |..|++||++.-.
T Consensus 183 mR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~si--SDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~ 260 (1118)
T KOG1275|consen 183 MRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSI--SDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALS 260 (1118)
T ss_pred EEecCcEEEeecccceEEeecCCcCceeeeeeccccce--eeeeccCCeEEEeecccccccccccchhhhhhhhhhhccC
Confidence 44588999999999999999999999999999988866 456778999988654 6779999997421
Q ss_pred ----cccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCc-e---eeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 87 ----SSWVLSTAFTRDG-KFFISASADHTVRVWNFARRE-N---MHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 87 ----~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~-~---~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
.....-+.|.|.- ..++.++..|...+.|..+.. + +..+ +....+...++|++|+.++.+..+|.|.+|.
T Consensus 261 PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 261 PIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 1112345677753 356777788999999844321 1 1112 2344588999999999999999999999999
Q ss_pred C
Q psy10953 157 Y 157 (181)
Q Consensus 157 ~ 157 (181)
-
T Consensus 341 ~ 341 (1118)
T KOG1275|consen 341 D 341 (1118)
T ss_pred C
Confidence 4
No 279
>KOG3914|consensus
Probab=98.58 E-value=5.2e-07 Score=68.82 Aligned_cols=73 Identities=25% Similarity=0.436 Sum_probs=60.0
Q ss_pred CCceEEEEEECCCCCEEEEeeCCCcEEEEeCC---------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee
Q psy10953 52 RGKFTLSIAYSTDGHWIASGALDGIINIFDAN---------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM 122 (181)
Q Consensus 52 ~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 122 (181)
|-..+..+.++||++.++++..|..|++-... -||+..|..+++.++ +.|++++-|+++++||+++++.+
T Consensus 150 hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 150 HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcc
Confidence 34456789999999999999999999987643 368888888887664 56899999999999999998776
Q ss_pred eee
Q psy10953 123 HTF 125 (181)
Q Consensus 123 ~~~ 125 (181)
+++
T Consensus 229 ~t~ 231 (390)
T KOG3914|consen 229 DTC 231 (390)
T ss_pred ccc
Confidence 654
No 280
>KOG1832|consensus
Probab=98.58 E-value=2.6e-07 Score=77.12 Aligned_cols=147 Identities=15% Similarity=0.242 Sum_probs=95.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC--------
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD-------- 74 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d-------- 74 (181)
.+..+..+.....+++|+.+.++|+.|+..|.|++|++.+|........|+..+.-+.-+.||..+++.+.-
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 344555566667899999999999999999999999999999888888887777667777777666553321
Q ss_pred ---------------------------------CcEEEEeCCCCCc------------ccEEEEEEcCCCCEEEEEeCCC
Q psy10953 75 ---------------------------------GIINIFDANTGHS------------SWVLSTAFTRDGKFFISASADH 109 (181)
Q Consensus 75 ---------------------------------~~v~i~d~~~~~~------------~~v~~~~~s~~~~~l~~~~~d~ 109 (181)
..+.+||+.+++. ..-+.+.|+|+.++++- ||
T Consensus 1173 ~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG 1249 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG 1249 (1516)
T ss_pred ccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee---Cc
Confidence 1233444433321 01134566666665542 22
Q ss_pred cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 110 TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 110 ~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.+||.+..+.++.|..-..-..-.|+|.|..++..+ .|||+++
T Consensus 1250 --vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RT 1292 (1516)
T KOG1832|consen 1250 --VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRT 1292 (1516)
T ss_pred --eeeeeccHHHHhhhhhheecccccccCCCceEEeec-----hhhhhHH
Confidence 467777666666554222222446788888777766 4677654
No 281
>KOG2315|consensus
Probab=98.56 E-value=2.2e-06 Score=68.06 Aligned_cols=124 Identities=17% Similarity=0.363 Sum_probs=83.7
Q ss_pred eeeEEEEEEcCCCCEEEE--EeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC---CcEEEEeCCCC
Q psy10953 11 PVDMWNVVFSPDDKYVLS--GSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD---GIINIFDANTG 85 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~--~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d---~~v~i~d~~~~ 85 (181)
...|.++.|+|+|+-+++ |-.=.++.+||++ ++.+..+ .......+-|+|.|++++.++.+ |.+-+||+.+.
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~ 346 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR 346 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence 455899999999988754 3344689999987 4433333 23333579999999998877654 78999998753
Q ss_pred C------cccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCceeeeeecCCcEEEEEEcc
Q psy10953 86 H------SSWVLSTAFTRDGKFFISASA------DHTVRVWNFARRENMHTFKHADQVWCVCVAP 138 (181)
Q Consensus 86 ~------~~~v~~~~~s~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp 138 (181)
+ ....+-+.|+|||++++|++. |..++||+... ..++......+.+.++|-|
T Consensus 347 K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG-~~l~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 347 KLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG-SLLHEKMFKSELLQVEWRP 410 (566)
T ss_pred hhccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecC-ceeehhhhhHhHhheeeee
Confidence 2 223456789999999998875 57799998743 3333322222344444443
No 282
>KOG1409|consensus
Probab=98.56 E-value=1.6e-06 Score=65.28 Aligned_cols=148 Identities=19% Similarity=0.345 Sum_probs=102.5
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC-------
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA------- 82 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~------- 82 (181)
+..-++.+-|+-...++++.+.|+.+..--.+.++-+.-+......+ .+.+.-. +...|...+.+.+..+
T Consensus 113 h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t-~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~ 189 (404)
T KOG1409|consen 113 HQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPAS-ALQFDAL--YAFVGDHSGQITMLKLEQNGCQL 189 (404)
T ss_pred hhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCC-CCceeeE--EEEecccccceEEEEEeecCCce
Confidence 44556778888888889999999888776666665443222111110 1111111 2333444555554433
Q ss_pred ---CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee--eeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 83 ---NTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM--HTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 83 ---~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
..+|...+.+++|.|..+.|+++..|..+.+||+..++.+ ..+.|.+.|..++.-+--+.+++++.|+.|.+|++
T Consensus 190 i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~m 269 (404)
T KOG1409|consen 190 ITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNM 269 (404)
T ss_pred EEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEec
Confidence 2468888999999999999999999999999998754432 23347778888887788889999999999999999
Q ss_pred CCC
Q psy10953 158 KPE 160 (181)
Q Consensus 158 ~~~ 160 (181)
+-.
T Consensus 270 n~~ 272 (404)
T KOG1409|consen 270 NVK 272 (404)
T ss_pred cce
Confidence 653
No 283
>KOG4190|consensus
Probab=98.55 E-value=5.6e-07 Score=71.76 Aligned_cols=159 Identities=14% Similarity=0.226 Sum_probs=110.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-------cEEEEEecCCceEEEEEECCCCCEEEEeeCCCc
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG-------KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGI 76 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~ 76 (181)
+.+...+..+++.++--.+.+-+++++.|+++++|.++.. .+...++.|...+.++.|-.+.+.+ ++.|+-
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i--~ScD~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSI--ASCDGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecccee--eeccCc
Confidence 3445566666766665567778899999999999998632 1233455566667777777676655 466899
Q ss_pred EEEEeCCCC----------CcccEEEEEEcCC--CCEEEE-EeCCCcEEEEecCCCceeeeeec-----C-CcEEEEEEc
Q psy10953 77 INIFDANTG----------HSSWVLSTAFTRD--GKFFIS-ASADHTVRVWNFARRENMHTFKH-----A-DQVWCVCVA 137 (181)
Q Consensus 77 v~i~d~~~~----------~~~~v~~~~~s~~--~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~-----~-~~v~~~~~s 137 (181)
+++||.-.+ ..+.+..+..-++ ...+.. ++...+++++|.+...-.+.++. + .-+.+++.-
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence 999997422 2223333333443 333333 46788999999998765555541 2 347899999
Q ss_pred cCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 138 PDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 138 p~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
|.|+.++++-.+|.+.+.|.++|..+.
T Consensus 886 ~~GN~lAa~LSnGci~~LDaR~G~vIN 912 (1034)
T KOG4190|consen 886 DKGNKLAAALSNGCIAILDARNGKVIN 912 (1034)
T ss_pred cCcchhhHHhcCCcEEEEecCCCceec
Confidence 999999999999999999988876554
No 284
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.52 E-value=5.5e-05 Score=58.60 Aligned_cols=113 Identities=15% Similarity=0.182 Sum_probs=81.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC----------CCcEEEEeCCCCC
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL----------DGIINIFDANTGH 86 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~----------d~~v~i~d~~~~~ 86 (181)
++.+++..... ++|.+.|..+++.+..+..-.... .+ +||||+.|+.+.. +..|.+||+.+..
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 55555544433 899999999999988777543333 34 9999998877654 7899999987542
Q ss_pred c---------------ccEEEEEEcCCCCEEEEEe-C-CCcEEEEecCCCceeeeeecCCcEEEEEE
Q psy10953 87 S---------------SWVLSTAFTRDGKFFISAS-A-DHTVRVWNFARRENMHTFKHADQVWCVCV 136 (181)
Q Consensus 87 ~---------------~~v~~~~~s~~~~~l~~~~-~-d~~i~v~d~~~~~~~~~~~~~~~v~~~~~ 136 (181)
. .....++++|||++++... . +..+.++|+.+++.+.++.-+++..-...
T Consensus 89 ~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t 155 (352)
T TIGR02658 89 PIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPT 155 (352)
T ss_pred EEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEe
Confidence 1 1223789999999887655 3 78999999999998888876554444443
No 285
>KOG2695|consensus
Probab=98.52 E-value=3e-07 Score=69.19 Aligned_cols=128 Identities=15% Similarity=0.250 Sum_probs=92.2
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-----EEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEEeCC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK-----LEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d~~ 83 (181)
...+|+++.|...++++..|+..|.|..+|++.+. ..+.+ .|+..+.++..-. +++.|.+.+-+|+|++||++
T Consensus 251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R 329 (425)
T KOG2695|consen 251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLR 329 (425)
T ss_pred cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeeh
Confidence 45667888898889999999999999999998652 23333 2455555664433 67788888889999999986
Q ss_pred CC--------CcccEEE-----EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCC-----cEEEEEEcc
Q psy10953 84 TG--------HSSWVLS-----TAFTRDGKFFISASADHTVRVWNFARRENMHTFKHAD-----QVWCVCVAP 138 (181)
Q Consensus 84 ~~--------~~~~v~~-----~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~sp 138 (181)
-- ..+.|+. +...+....+++++.|...++|.++.+..+.+++.+. .+++++|..
T Consensus 330 ~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 330 ATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFDS 402 (425)
T ss_pred hhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehhc
Confidence 21 1122322 3345556788999999999999999999998886432 456666643
No 286
>KOG1409|consensus
Probab=98.48 E-value=1.6e-05 Score=60.08 Aligned_cols=159 Identities=18% Similarity=0.244 Sum_probs=109.6
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+++..+-..+.+...-|...-+++.+.|.++++|--+ .++.-..+-. -......+.+.++.+.|+.|-.+|++.-+.+
T Consensus 18 ~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~ 97 (404)
T KOG1409|consen 18 SKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFAL 97 (404)
T ss_pred hhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEh
Confidence 4455555566677777888889999999999999543 4444333222 1233457888999999999999999888865
Q ss_pred C------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC--------------------------------
Q psy10953 83 N------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR-------------------------------- 118 (181)
Q Consensus 83 ~------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-------------------------------- 118 (181)
. ..|...+..+-|+...+++++.+.|..+..--.+.
T Consensus 98 sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqv 177 (404)
T KOG1409|consen 98 SEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQI 177 (404)
T ss_pred hhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccce
Confidence 3 23556677777777777777777665443221110
Q ss_pred ---------Cceeeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 119 ---------RENMHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 119 ---------~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
-..+..+ .|.+.+.++++.|..+.+++|+.|..+-+|++.....+
T Consensus 178 t~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~ 232 (404)
T KOG1409|consen 178 TMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGT 232 (404)
T ss_pred EEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcce
Confidence 0111222 36778999999999999999999999999999655443
No 287
>KOG1354|consensus
Probab=98.48 E-value=3.9e-06 Score=63.33 Aligned_cols=145 Identities=18% Similarity=0.293 Sum_probs=100.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCc----EEEEEecCCc------------eEEEEEECCCC--CEEEEeeCC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVE-TGK----LEQIFDTRGK------------FTLSIAYSTDG--HWIASGALD 74 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~----~~~~~~~~~~------------~~~~~~~s~d~--~~l~~~~~d 74 (181)
+.++.|...|.+|++|..+|.|.+|.-. ..+ ....++.|.. -+..+.|.+++ ..++....|
T Consensus 28 is~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNd 107 (433)
T KOG1354|consen 28 ISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTND 107 (433)
T ss_pred eeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCC
Confidence 5889999999999999999999999543 332 3334443321 12356776665 467778889
Q ss_pred CcEEEEeCCC--------------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCc
Q psy10953 75 GIINIFDANT--------------------------------------------GHSSWVLSTAFTRDGKFFISASADHT 110 (181)
Q Consensus 75 ~~v~i~d~~~--------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~ 110 (181)
.++++|.+.. .|...|+++.++.|++.++++. |=.
T Consensus 108 ktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLR 186 (433)
T KOG1354|consen 108 KTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD-DLR 186 (433)
T ss_pred cceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc-cee
Confidence 9999997531 1344577889999999888765 668
Q ss_pred EEEEecCCC-cee--eeee------cCCcEEEEEEccCCC-EEEEEcCCCcEEEEeCCC
Q psy10953 111 VRVWNFARR-ENM--HTFK------HADQVWCVCVAPDGD-KFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 111 i~v~d~~~~-~~~--~~~~------~~~~v~~~~~sp~g~-~l~~~~~d~~v~i~~~~~ 159 (181)
|.+|++.-. +.+ ..++ ....|++..|+|... .|+-.+.-|.|++-|++.
T Consensus 187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~ 245 (433)
T KOG1354|consen 187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQ 245 (433)
T ss_pred eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechh
Confidence 999998632 222 2222 123588899999754 455566678999999964
No 288
>KOG0882|consensus
Probab=98.45 E-value=1.9e-06 Score=66.99 Aligned_cols=156 Identities=19% Similarity=0.188 Sum_probs=110.8
Q ss_pred eeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcEEEEEe--cCCceEEEEEECCCC-C-EEE-EeeCCCcEEEEeCCC-
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQ-SGKINLYGVETGKLEQIFD--TRGKFTLSIAYSTDG-H-WIA-SGALDGIINIFDANT- 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~s~d~-~-~l~-~~~~d~~v~i~d~~~- 84 (181)
.-+.+++.+.+|.++.+.+. |+.++++|+.+-....-+. .-..++ ++..++.. . .++ +...++.+.++|...
T Consensus 54 ~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d 132 (558)
T KOG0882|consen 54 GVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGD 132 (558)
T ss_pred HHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCce-EEecCCCCeeeeEEeecccCCCcEEECCcCC
Confidence 33566778889999999777 9999999998766542222 122222 34444432 1 233 345678999998652
Q ss_pred ---------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC------Cceeeeeec----------CCcEEEEEEccC
Q psy10953 85 ---------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR------RENMHTFKH----------ADQVWCVCVAPD 139 (181)
Q Consensus 85 ---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~------~~~~~~~~~----------~~~v~~~~~sp~ 139 (181)
-|..+|..+.+.|.+...++....|.|.-|.... ......++| .....+++|+|+
T Consensus 133 ~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~ 212 (558)
T KOG0882|consen 133 FCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPD 212 (558)
T ss_pred cCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccc
Confidence 3677899999999999999999999999998763 111111122 235678999999
Q ss_pred CCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 140 GDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 140 g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
|..+.+-+.|..|+++..+++..+.+.++
T Consensus 213 g~qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 213 GAQISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred cCcccccCcccEEEEEEeccchhhhhhhc
Confidence 99999999999999999999876655554
No 289
>KOG2314|consensus
Probab=98.45 E-value=9.6e-06 Score=64.69 Aligned_cols=146 Identities=16% Similarity=0.227 Sum_probs=99.9
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-----------CCcEEEEeCC
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-----------DGIINIFDAN 83 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-----------d~~v~i~d~~ 83 (181)
.-+.|||.|.+|++-..- -|.+|--.+-..++.|.+.+. .-+.|||..++|++-+. -..+.|||+.
T Consensus 214 tyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~Hp~V--q~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFYHPGV--QFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecCCceEEEEEecc-ceeeecCccHHHHHhccCCCc--eeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 457899999999998755 467786555555566654333 46899999999998653 1578999999
Q ss_pred CCCcccE-----------EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCC--
Q psy10953 84 TGHSSWV-----------LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGED-- 149 (181)
Q Consensus 84 ~~~~~~v-----------~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d-- 149 (181)
+|+.... --+.||.|++++|.-.. ..|.||+......+..-. ....|..-.|+|.++.||-=...
T Consensus 291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~ 369 (698)
T KOG2314|consen 291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETN 369 (698)
T ss_pred ccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEccccc
Confidence 8864321 12579999999987776 579999876643332211 23457778888988877654432
Q ss_pred ---CcEEEEeCCCCeeEE
Q psy10953 150 ---KAVHMYSYKPEEEVE 164 (181)
Q Consensus 150 ---~~v~i~~~~~~~~~~ 164 (181)
.++.+-.+.++++++
T Consensus 370 ~~parvtL~evPs~~~iR 387 (698)
T KOG2314|consen 370 NIPARVTLMEVPSKREIR 387 (698)
T ss_pred CCcceEEEEecCccceee
Confidence 245666666666555
No 290
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.43 E-value=9.3e-06 Score=65.09 Aligned_cols=105 Identities=21% Similarity=0.268 Sum_probs=75.5
Q ss_pred EEEEEEcC-CCCEEEE----EeCCCc----EEEEeCCCCcEEEEEe---cCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 14 MWNVVFSP-DDKYVLS----GSQSGK----INLYGVETGKLEQIFD---TRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 14 ~~~~~~s~-~g~~l~~----~~~d~~----i~~~d~~~~~~~~~~~---~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
..++.||- ++..+.+ .+.+|. -.+|++..+++...-. .....+.+++++|+...|+.|..||.+.+||
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD 287 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYD 287 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence 35677775 4444443 333443 4467776665443211 1233456899999999999999999999999
Q ss_pred CCCCCc------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy10953 82 ANTGHS------SWVLSTAFTRDGKFFISASADHTVRVWNFAR 118 (181)
Q Consensus 82 ~~~~~~------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 118 (181)
...+-. -.+..++|+|+|..+++|+..|.+.+||++-
T Consensus 288 ~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 288 TTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred cCCCeeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 876532 2356789999999999999999999999764
No 291
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.41 E-value=2.9e-05 Score=63.62 Aligned_cols=142 Identities=14% Similarity=0.171 Sum_probs=95.0
Q ss_pred EEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee-----------------------
Q psy10953 17 VVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------------------- 72 (181)
Q Consensus 17 ~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------------------- 72 (181)
+=++|||+.+. +.-..+.+.+.|.++.+....+...+.. ..+.++|||+++++.+
T Consensus 198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnp-d~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvf 276 (635)
T PRK02888 198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNL-DNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVF 276 (635)
T ss_pred cccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCc-ccceECCCCCEEEEeccCcccCcceeeeccccCceEEEE
Confidence 33566777663 3333456777788776665444433322 3467788888776654
Q ss_pred -----------------CCCcEEEEeCCC----CC--------cccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCce-
Q psy10953 73 -----------------LDGIINIFDANT----GH--------SSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARREN- 121 (181)
Q Consensus 73 -----------------~d~~v~i~d~~~----~~--------~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~- 121 (181)
.++.|.+.|..+ +. ......+.++|||+++++++ .+.++.|+|+...+.
T Consensus 277 ni~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~ 356 (635)
T PRK02888 277 NIARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDL 356 (635)
T ss_pred chHHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhh
Confidence 124577777766 21 12345689999999877666 488999999987442
Q ss_pred -----------eeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 122 -----------MHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 122 -----------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
..+..........+|+++|+.+.+...|..|..|++..
T Consensus 357 ~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 357 FDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 23333344556789999999888888999999999864
No 292
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.38 E-value=5.8e-05 Score=59.69 Aligned_cols=150 Identities=13% Similarity=0.132 Sum_probs=99.2
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEe-----------CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe--eCC
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGS-----------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG--ALD 74 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~-----------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~--~~d 74 (181)
..-..+-..+.|.+.|++|..-- ...++.+++++...+-... ...+.+..++|.|.++.+++. -..
T Consensus 219 ~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~p 297 (561)
T COG5354 219 NLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMP 297 (561)
T ss_pred eeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceec-cccccceeeeecccCCceeEEecccc
Confidence 33344445678899999875321 1246788888744433332 334456789999999887764 456
Q ss_pred CcEEEEeCCCCC-----cccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceee-eeecCCcEEEEEEccCCCEEEE
Q psy10953 75 GIINIFDANTGH-----SSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMH-TFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 75 ~~v~i~d~~~~~-----~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
..+.++|++..- ...=+-+-|+|.+++++.++.| |++-+||........ .+.- ..-.-+.|+||++++.+
T Consensus 298 a~~s~~~lr~Nl~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~-~n~s~~~wspd~qF~~~ 376 (561)
T COG5354 298 ASVSVFDLRGNLRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG-LNTSYCDWSPDGQFYDT 376 (561)
T ss_pred cceeecccccceEEecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec-CCceEeeccCCceEEEe
Confidence 777888876421 1111335699999999988865 789999988766554 3332 22344679999999876
Q ss_pred Ec------CCCcEEEEeCCC
Q psy10953 146 VG------EDKAVHMYSYKP 159 (181)
Q Consensus 146 ~~------~d~~v~i~~~~~ 159 (181)
.- .|+.+.||++..
T Consensus 377 ~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 377 DTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred cCCCcccccCcceEEEEecC
Confidence 54 478899999843
No 293
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.37 E-value=7.4e-06 Score=65.09 Aligned_cols=133 Identities=20% Similarity=0.256 Sum_probs=82.2
Q ss_pred EEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC--cEEEEeCCCCCcc
Q psy10953 15 WNVVFSPDDKYVL-SGSQSGK--INLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG--IINIFDANTGHSS 88 (181)
Q Consensus 15 ~~~~~s~~g~~l~-~~~~d~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~--~v~i~d~~~~~~~ 88 (181)
..-+|||||++|+ +...|+. |.++|+.+++..++....+... .-.|+|||++++..+. .| .|.+++.......
T Consensus 241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~-~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~ 319 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINT-SPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT 319 (425)
T ss_pred CCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCcccc-CccCCCCCCEEEEEeCCCCCcceEEECCCCCcee
Confidence 4567999999986 4455665 5566777777545333333332 6789999999987643 44 4556666543221
Q ss_pred cE-------EEEEEcCCCCEEEEEeCC-Cc--EEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 89 WV-------LSTAFTRDGKFFISASAD-HT--VRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 89 ~v-------~~~~~s~~~~~l~~~~~d-~~--i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
.+ ....|+|+|++++..+.. +. |.+.|+.++.....+........-.+.|+|+.+...+.
T Consensus 320 riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 320 RLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSG 389 (425)
T ss_pred EeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEecc
Confidence 11 156799999988877743 43 66666665553333334334445566788877665553
No 294
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.31 E-value=2.3e-05 Score=58.67 Aligned_cols=149 Identities=19% Similarity=0.332 Sum_probs=104.9
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cEEEEEec--C-----CceEEEEEECCCC-CEEEEeeCCCcEE
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG-KLEQIFDT--R-----GKFTLSIAYSTDG-HWIASGALDGIIN 78 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-~~~~~~~~--~-----~~~~~~~~~s~d~-~~l~~~~~d~~v~ 78 (181)
..++..+.+++|..|.+.++++ +|-.|.+|++.-- ........ + ...+.+..|+|.. ..+-..++-|.++
T Consensus 169 NaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik 247 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK 247 (460)
T ss_pred ccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence 3577778899999998888776 5789999987522 11122221 1 2345678899964 5666788899999
Q ss_pred EEeCCCC------------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-ceeeeee-c-----
Q psy10953 79 IFDANTG------------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-ENMHTFK-H----- 127 (181)
Q Consensus 79 i~d~~~~------------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~-~----- 127 (181)
+.|++.. -.+.|..+.|+++|+++++-+. -++++||.... .++.+++ |
T Consensus 248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~ 326 (460)
T COG5170 248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMD 326 (460)
T ss_pred ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHH
Confidence 9998721 1245778999999999987664 48999998754 3455542 2
Q ss_pred -------CCcEE---EEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 128 -------ADQVW---CVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 128 -------~~~v~---~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
.+.|. .+.||-|.+.+.+|+..+..-+|...
T Consensus 327 ~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 327 ELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred HHHhhhhccceeeeEEEEecCCcccccccccccceeeeccc
Confidence 22333 47889899999999998888888743
No 295
>KOG4714|consensus
Probab=98.31 E-value=2.6e-06 Score=61.99 Aligned_cols=140 Identities=15% Similarity=0.207 Sum_probs=88.2
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCc-EEEEEecCCceEEEEEECCCCCEEEEee-----CCCcEEEEeCCCC--------
Q psy10953 20 SPDDKYVLSGSQSGKINLYGVETGK-LEQIFDTRGKFTLSIAYSTDGHWIASGA-----LDGIINIFDANTG-------- 85 (181)
Q Consensus 20 s~~g~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~s~d~~~l~~~~-----~d~~v~i~d~~~~-------- 85 (181)
+.-++.++++..|+.+.+++.+... ....+........+.+.-..++.+.++. .-+..+.|+++..
T Consensus 98 s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~ 177 (319)
T KOG4714|consen 98 TMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKK 177 (319)
T ss_pred cccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccccc
Confidence 3356788999999999999876411 1111111110011222222344333321 1234555665422
Q ss_pred CcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeee-e-cCCcEEEEEEcc-CCCEEEEEcCCCcEEEEeCCC
Q psy10953 86 HSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTF-K-HADQVWCVCVAP-DGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 86 ~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~-~-~~~~v~~~~~sp-~g~~l~~~~~d~~v~i~~~~~ 159 (181)
....|.+++-+|..+ .+++|+.||.+-+||.+...-+..+ . |..++|.+-|+| ++..|+++++||.+-.|+-.+
T Consensus 178 ~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 178 ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 122367777788665 6667778999999999887544333 2 778899999998 578899999999999999764
No 296
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.27 E-value=0.00014 Score=53.09 Aligned_cols=140 Identities=21% Similarity=0.302 Sum_probs=89.8
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEE---------
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVL--------- 91 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~--------- 91 (181)
+++.++++++.++.+..||..+|+.+-.+...+...... ..++..++.+..++.+..+|..+++..+..
T Consensus 34 ~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~ 111 (238)
T PF13360_consen 34 PDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAP--VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG 111 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGE--EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred EeCCEEEEEcCCCEEEEEECCCCCEEEEeecccccccee--eecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence 466777788899999999999999887666533321111 223455666667888999998777543321
Q ss_pred ---EEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCC-c----------EEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 92 ---STAFTRDGKFFISASADHTVRVWNFARRENMHTFKHAD-Q----------VWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 92 ---~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~----------v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
.......++.++.+..++.+..+|+++++.+....... . +..-.+..++ .++.++.++.+..++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~ 190 (238)
T PF13360_consen 112 VRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDL 190 (238)
T ss_dssp TB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEET
T ss_pred cccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEEC
Confidence 11122236777888889999999999999877765322 1 1222233344 6666776665333388
Q ss_pred CCCeeE
Q psy10953 158 KPEEEV 163 (181)
Q Consensus 158 ~~~~~~ 163 (181)
.+++.+
T Consensus 191 ~tg~~~ 196 (238)
T PF13360_consen 191 ATGEKL 196 (238)
T ss_dssp TTTEEE
T ss_pred CCCCEE
Confidence 877643
No 297
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.27 E-value=0.00031 Score=51.95 Aligned_cols=146 Identities=14% Similarity=0.192 Sum_probs=91.8
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCC--cEEEEEecC---CceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC---
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETG--KLEQIFDTR---GKFTLSIAYSTDGHWIASGALDGIINIFDANTGH--- 86 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~--~~~~~~~~~---~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--- 86 (181)
|.++.++||+.||.- +|..|.+-..++. ..+...+.. ...-+.++||||+..||.+...|+|+++|+...+
T Consensus 1 W~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~ 79 (282)
T PF15492_consen 1 WHLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFV 79 (282)
T ss_pred CceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEE
Confidence 467889999988766 5778888766543 222222221 1223479999999999999999999999986321
Q ss_pred -----------cccEEEEEEcCCC------CEEEEEeCCCcEEEEec--C---CCceeeeee----cCCcEEEEEEccCC
Q psy10953 87 -----------SSWVLSTAFTRDG------KFFISASADHTVRVWNF--A---RRENMHTFK----HADQVWCVCVAPDG 140 (181)
Q Consensus 87 -----------~~~v~~~~~s~~~------~~l~~~~~d~~i~v~d~--~---~~~~~~~~~----~~~~v~~~~~sp~g 140 (181)
...|..+.|.+-. ..|+.-..+|.++=|-+ . ..+..+++. ++..|.+++++|..
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h 159 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH 159 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC
Confidence 1234444444321 13455556666554433 1 223334432 46689999999999
Q ss_pred CEEEEEcCCC-----------cEEEEeCCCCe
Q psy10953 141 DKFVSVGEDK-----------AVHMYSYKPEE 161 (181)
Q Consensus 141 ~~l~~~~~d~-----------~v~i~~~~~~~ 161 (181)
+.|+.||... .+.-|++-.+.
T Consensus 160 ~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~ 191 (282)
T PF15492_consen 160 RLLLVGGCEQNQDGMSKASSCGLTAWRILSDS 191 (282)
T ss_pred CEEEEeccCCCCCccccccccCceEEEEcCCC
Confidence 9988877421 35677765443
No 298
>KOG1912|consensus
Probab=98.27 E-value=6.5e-05 Score=62.37 Aligned_cols=142 Identities=18% Similarity=0.265 Sum_probs=105.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC------------CEEEEeeCCCcEEEEe
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG------------HWIASGALDGIINIFD 81 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~------------~~l~~~~~d~~v~i~d 81 (181)
-..++|+|.| ++|.|+. ..|.+.|..+-+.++.+..|...+..+.|.|.. -.|+++.-.|.|.+||
T Consensus 18 ~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d 95 (1062)
T KOG1912|consen 18 RNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVD 95 (1062)
T ss_pred ccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEE
Confidence 3567788765 5677764 478889999999999999998888899998731 2466778889999999
Q ss_pred CCC--------CCcccEEEEEEcCC---C-CEEEEEeCCCcEEEEecCCCceeeeeecCCc-EEEEEEcc-CCCEEEEEc
Q psy10953 82 ANT--------GHSSWVLSTAFTRD---G-KFFISASADHTVRVWNFARRENMHTFKHADQ-VWCVCVAP-DGDKFVSVG 147 (181)
Q Consensus 82 ~~~--------~~~~~v~~~~~s~~---~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-v~~~~~sp-~g~~l~~~~ 147 (181)
... .+...+..+.|-|. . .+|+.-....++.+||..+|+.+..+..... ..|..+.| |.+.+..-+
T Consensus 96 ~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~ 175 (1062)
T KOG1912|consen 96 FVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLG 175 (1062)
T ss_pred ehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEc
Confidence 864 24566777877763 3 4666666678999999999999988875544 44588888 556666666
Q ss_pred CCCcEEEEeC
Q psy10953 148 EDKAVHMYSY 157 (181)
Q Consensus 148 ~d~~v~i~~~ 157 (181)
..|.+.+-+.
T Consensus 176 s~g~vl~~~~ 185 (1062)
T KOG1912|consen 176 SKGFVLSCKD 185 (1062)
T ss_pred cCceEEEEec
Confidence 6777766554
No 299
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.25 E-value=0.00013 Score=57.23 Aligned_cols=138 Identities=14% Similarity=0.194 Sum_probs=91.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEE----EEEcC
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLS----TAFTR 97 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~----~~~s~ 97 (181)
.+..+++++.++.+..+|..+|+.+-.+........... .++..++.++.++.++.+|..++...+-.. +.-+|
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p 141 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPP 141 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCC
Confidence 466788888899999999999998765554443222222 246678888889999999998765322111 11112
Q ss_pred --CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEE------EEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 98 --DGKFFISASADHTVRVWNFARRENMHTFKHADQVW------CVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 98 --~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~------~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
.+..++.++.++.++.||.++++.+..+....... +..+ .+..++.+..++.+..++..+|+.+
T Consensus 142 ~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~ 213 (377)
T TIGR03300 142 LVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPL 213 (377)
T ss_pred EEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEe
Confidence 24456667778999999999998877665332221 1111 1346777788889999998877654
No 300
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.24 E-value=0.0001 Score=64.11 Aligned_cols=144 Identities=14% Similarity=0.255 Sum_probs=96.3
Q ss_pred EEEEEcCCCCEEEEEeC---CCcEEEEeCCCCcEEEEEec----CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-
Q psy10953 15 WNVVFSPDDKYVLSGSQ---SGKINLYGVETGKLEQIFDT----RGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH- 86 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~---d~~i~~~d~~~~~~~~~~~~----~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~- 86 (181)
..++|.|.|+++|+... ...|.+|+- +|-....|.. ....+..+.|++|+..|+..-.|. |.+|.....|
T Consensus 260 ~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHW 337 (928)
T PF04762_consen 260 GALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHW 337 (928)
T ss_pred CCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEE
Confidence 46899999999988764 456888864 3333333332 344577899999999999877665 9999876543
Q ss_pred ----------cccEEEEEEcCCC-CEEEEEeCCCcEEEEecCC--------------------Cc--------------e
Q psy10953 87 ----------SSWVLSTAFTRDG-KFFISASADHTVRVWNFAR--------------------RE--------------N 121 (181)
Q Consensus 87 ----------~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~--------------------~~--------------~ 121 (181)
...+..+.|+|.. ..|...+.++.+..+++.- |. +
T Consensus 338 YLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPP 417 (928)
T PF04762_consen 338 YLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPP 417 (928)
T ss_pred EEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCch
Confidence 2233448888853 4455555556555554310 00 1
Q ss_pred e--eeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 122 M--HTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 122 ~--~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+ ..+..+..|.+++|++++..+++...|+.+.+|.+...
T Consensus 418 Ms~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 418 MSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred HhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCC
Confidence 1 12234567899999999998999999999999986543
No 301
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.22 E-value=5.9e-05 Score=60.30 Aligned_cols=135 Identities=18% Similarity=0.247 Sum_probs=80.7
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe-CCCCC-----
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD-ANTGH----- 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d-~~~~~----- 86 (181)
....++++|+|+.++. +.||.-.++.....+.... +.. ..+.|.+.++ +|+-...+.|.++. .....
T Consensus 34 ~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~----G~g-~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~k~i~ 106 (443)
T PF04053_consen 34 YPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAF----GSG-LSFVWSSRNR-YAVLESSSTIKIYKNFKNEVVKSIK 106 (443)
T ss_dssp --SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEE----EE--SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT----
T ss_pred CCeeEEECCCCCEEEE-EcCCEEEEEEccCCccccc----Cce-eEEEEecCcc-EEEEECCCeEEEEEcCccccceEEc
Confidence 3567899999999988 5588888887544443221 222 3578888555 77777688899963 32111
Q ss_pred -cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 87 -SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 87 -~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
...+..+- + |.+|...+.+ .|.+||..+++.+..+.... |..+.|+++|++++..+.+ .+.+++....
T Consensus 107 ~~~~~~~If--~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il~~~~~ 175 (443)
T PF04053_consen 107 LPFSVEKIF--G-GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYILKYNLE 175 (443)
T ss_dssp -SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEEE-HH
T ss_pred CCcccceEE--c-CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEEEecch
Confidence 11123332 2 8877766644 89999999999998888653 8899999999999988855 7777776543
No 302
>KOG2314|consensus
Probab=98.22 E-value=0.00014 Score=58.38 Aligned_cols=153 Identities=11% Similarity=0.235 Sum_probs=95.5
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCcEE-EEEecCCceEEEEEECCCCCEEEEee
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGS----------QSGKINLYGVETGKLE-QIFDTRGKFTLSIAYSTDGHWIASGA 72 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~----------~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~s~d~~~l~~~~ 72 (181)
|+...+....-..+-|-.+|.+|..-- .-..+.|+.++...+- ..+.. ...+...+|.|.|..+++-+
T Consensus 386 iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~vel-ke~vi~FaWEP~gdkF~vi~ 464 (698)
T KOG2314|consen 386 IRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVEL-KESVIAFAWEPHGDKFAVIS 464 (698)
T ss_pred eeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeec-chheeeeeeccCCCeEEEEE
Confidence 333333333334456777888886422 2224556665543322 22222 23355789999999887654
Q ss_pred C---CCcEEEEeCC-CCC---------cccEEEEEEcCCCCEEEEEe---CCCcEEEEecCC--CceeeeeecCCcEEEE
Q psy10953 73 L---DGIINIFDAN-TGH---------SSWVLSTAFTRDGKFFISAS---ADHTVRVWNFAR--RENMHTFKHADQVWCV 134 (181)
Q Consensus 73 ~---d~~v~i~d~~-~~~---------~~~v~~~~~s~~~~~l~~~~---~d~~i~v~d~~~--~~~~~~~~~~~~v~~~ 134 (181)
. -.++++|.++ +.+ ....+.+.|+|.|++++.+. ..|.+.++|+.- -+.+....| ...+.+
T Consensus 465 g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~v 543 (698)
T KOG2314|consen 465 GNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEV 543 (698)
T ss_pred ccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccc
Confidence 3 3578888876 222 12356789999999987765 468999999864 222222233 345678
Q ss_pred EEccCCCEEEEEcC------CCcEEEEeCC
Q psy10953 135 CVAPDGDKFVSVGE------DKAVHMYSYK 158 (181)
Q Consensus 135 ~~sp~g~~l~~~~~------d~~v~i~~~~ 158 (181)
.|.|.|+++++++. |+.-++|++.
T Consensus 544 eWDPtGRYvvT~ss~wrhk~d~GYri~tfq 573 (698)
T KOG2314|consen 544 EWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ 573 (698)
T ss_pred eECCCCCEEEEeeehhhhccccceEEEEee
Confidence 89999999999884 4556777764
No 303
>KOG1645|consensus
Probab=98.21 E-value=1.9e-05 Score=60.80 Aligned_cols=84 Identities=18% Similarity=0.229 Sum_probs=66.8
Q ss_pred CcceeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEE
Q psy10953 1 MKQISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIIN 78 (181)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~ 78 (181)
|++++-+..+...+.+++|||..+ ++..++-+.+|++.|+++......+..+ ..+++++|..|.. +++.|..+|.|.
T Consensus 183 fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~Vl 261 (463)
T KOG1645|consen 183 FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVL 261 (463)
T ss_pred cchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEE
Confidence 345555555666789999999887 6788999999999999999888777665 4567889988765 566688999999
Q ss_pred EEeCCCC
Q psy10953 79 IFDANTG 85 (181)
Q Consensus 79 i~d~~~~ 85 (181)
+||.+..
T Consensus 262 vyD~R~~ 268 (463)
T KOG1645|consen 262 VYDMRQP 268 (463)
T ss_pred EEEccCC
Confidence 9999753
No 304
>KOG1334|consensus
Probab=98.17 E-value=4.3e-06 Score=65.56 Aligned_cols=150 Identities=19% Similarity=0.299 Sum_probs=106.4
Q ss_pred eeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEE------EEE------ecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 12 VDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLE------QIF------DTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 12 ~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~------~~~------~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
...+.++..|-.. .+++++.|..+++||.+.-... ..+ ......+.++.++.++.-|.+.=.|-.++
T Consensus 282 v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IY 361 (559)
T KOG1334|consen 282 VGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIY 361 (559)
T ss_pred eeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceE
Confidence 4678899998665 7889999999999998643322 111 11233467899997765555555566788
Q ss_pred EEeCC---------------------CCCcc--cEEEE-EEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEE
Q psy10953 79 IFDAN---------------------TGHSS--WVLST-AFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWC 133 (181)
Q Consensus 79 i~d~~---------------------~~~~~--~v~~~-~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~ 133 (181)
++... ++|.+ .|-.+ -|-|...++++|+.=|.|.||+=.+++.+..+. ....|+|
T Consensus 362 LF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNC 441 (559)
T KOG1334|consen 362 LFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNC 441 (559)
T ss_pred EeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEec
Confidence 88532 12321 23333 366888999999988999999988877666554 2237899
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+.=+|---.||+.+.|..|+||.-.+.+
T Consensus 442 LEpHP~~PvLAsSGid~DVKIWTP~~~e 469 (559)
T KOG1334|consen 442 LEPHPHLPVLASSGIDHDVKIWTPLTAE 469 (559)
T ss_pred cCCCCCCchhhccCCccceeeecCCccc
Confidence 9989988899999999999999975433
No 305
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.16 E-value=0.00025 Score=55.64 Aligned_cols=136 Identities=15% Similarity=0.157 Sum_probs=85.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceE-----EEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEE---
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFT-----LSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTA--- 94 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~-----~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~--- 94 (181)
+..++.++.++.+..+|.++|+.+-.+....... .+... .+..++.+..++.+..+|+++++..+...+.
T Consensus 145 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~ 222 (377)
T TIGR03300 145 NGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPK 222 (377)
T ss_pred CCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCC
Confidence 4456666778888888888888765443322111 01111 1245677778889999998776543321110
Q ss_pred ------------EcC--CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 95 ------------FTR--DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 95 ------------~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
-+| .+..+..++.++.++.||..+++......... ....+ .++..++.++.++.++.++..++
T Consensus 223 g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG 299 (377)
T TIGR03300 223 GRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPA--VDDNRLYVTDADGVVVALDRRSG 299 (377)
T ss_pred CCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-ccCce--EeCCEEEEECCCCeEEEEECCCC
Confidence 011 24566777889999999999988776554322 11222 34677888888999999999887
Q ss_pred eeE
Q psy10953 161 EEV 163 (181)
Q Consensus 161 ~~~ 163 (181)
+.+
T Consensus 300 ~~~ 302 (377)
T TIGR03300 300 SEL 302 (377)
T ss_pred cEE
Confidence 654
No 306
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.14 E-value=0.002 Score=50.85 Aligned_cols=155 Identities=16% Similarity=0.186 Sum_probs=110.2
Q ss_pred eEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCCc-
Q psy10953 13 DMWNVVFSPDDKYVLSGSQ---SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDGIINIFDANTGHS- 87 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~~~~~- 87 (181)
....++++|+++.+..+.. ++++.+.|..+++........... ..+.++|+|+.++.. ..++.+.+.|....+.
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~ 195 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV 195 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence 3568999999988876655 689999999999988774432223 689999999966654 4788999999754321
Q ss_pred -----------ccEEEEEEcCCCCEEEEEe-CC--CcEEEEecCCCceeee-eecCC-cEEEEEEccCCCEEEEEc-CCC
Q psy10953 88 -----------SWVLSTAFTRDGKFFISAS-AD--HTVRVWNFARRENMHT-FKHAD-QVWCVCVAPDGDKFVSVG-EDK 150 (181)
Q Consensus 88 -----------~~v~~~~~s~~~~~l~~~~-~d--~~i~v~d~~~~~~~~~-~~~~~-~v~~~~~sp~g~~l~~~~-~d~ 150 (181)
.....+.++|+|+.+.... .+ +.+...|..++..... ..... ....+.++|+|+++.+.. ..+
T Consensus 196 ~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~ 275 (381)
T COG3391 196 RGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGG 275 (381)
T ss_pred ccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCC
Confidence 1235678999998544444 33 5899999888776654 22222 466789999999988774 457
Q ss_pred cEEEEeCCCCeeEEEcCC
Q psy10953 151 AVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~~~ 168 (181)
.+.+.+..+.........
T Consensus 276 ~V~vid~~~~~v~~~~~~ 293 (381)
T COG3391 276 TVSVIDGATDRVVKTGPT 293 (381)
T ss_pred eEEEEeCCCCceeeeecc
Confidence 899988877665544333
No 307
>KOG2066|consensus
Probab=98.12 E-value=0.00015 Score=60.27 Aligned_cols=130 Identities=20% Similarity=0.240 Sum_probs=91.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-----CCEEEEeeCCCcEEEEeCC----------CCC
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-----GHWIASGALDGIINIFDAN----------TGH 86 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-----~~~l~~~~~d~~v~i~d~~----------~~~ 86 (181)
+|.++++|+.||++.+..+-+.+....+.. +.++.+++++|| .+++++|+.-| +.++.-+ ..-
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df-~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYDF-KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEec-CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence 699999999999999999988887776654 445678999998 46789998888 7666532 112
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCC-------cEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 87 SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHAD-------QVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 87 ~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
.+.|.++.| .|+++|-++.+| |++||...++.+..++.+. -...+.|.++.+.++ | -..+|.+..++
T Consensus 160 eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI-G-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 160 EGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI-G-WGDSVKICSIK 233 (846)
T ss_pred ccceEEEEe--cCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE-e-cCCeEEEEEEe
Confidence 456777766 577888888765 9999998877666554221 123567766654333 3 33366666665
No 308
>KOG2066|consensus
Probab=98.11 E-value=0.00024 Score=59.09 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=95.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-------cccEEEEE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH-------SSWVLSTA 94 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~-------~~~v~~~~ 94 (181)
.++.++-|..+|.+++++.+..- ...+.+... ..+|.++++++.||+|.+-.+-+.. ...+.+++
T Consensus 48 ~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~-------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksia 119 (846)
T KOG2066|consen 48 HDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS-------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIA 119 (846)
T ss_pred hcceeeeccccceEEEEecCCcc-ccccccccc-------ccCCceEEEecCCCcEEEeeccCCccceeEecCCcceeEE
Confidence 46789999999999999876443 333322111 6679999999999998888765432 34678899
Q ss_pred EcCC-----CCEEEEEeCCCcEEEEecC---CCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 95 FTRD-----GKFFISASADHTVRVWNFA---RRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 95 ~s~~-----~~~l~~~~~d~~i~v~d~~---~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
++|+ .+.+++|+.-| +.++.-. ....+....-.++|.++.| .|++++=++ |-.|++|+...++.+.-.
T Consensus 120 l~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWan-d~Gv~vyd~~~~~~l~~i 195 (846)
T KOG2066|consen 120 LHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWAN-DDGVKVYDTPTRQRLTNI 195 (846)
T ss_pred eccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEEEEec-CCCcEEEeccccceeecc
Confidence 9998 46788888877 7776422 1222222235678999988 466776555 667999999988887655
Q ss_pred CCCC
Q psy10953 167 GGGG 170 (181)
Q Consensus 167 ~~~~ 170 (181)
.+..
T Consensus 196 ~~p~ 199 (846)
T KOG2066|consen 196 PPPS 199 (846)
T ss_pred CCCC
Confidence 5543
No 309
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.10 E-value=0.00034 Score=50.99 Aligned_cols=138 Identities=22% Similarity=0.300 Sum_probs=87.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEE-ecCC---ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCccc--------
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIF-DTRG---KFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSW-------- 89 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~---~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~-------- 89 (181)
++..++.++.++.+..+|..+|+.+-.. .... ..........++..++.+..++.+..+|++++...+
T Consensus 75 ~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~ 154 (238)
T PF13360_consen 75 DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPR 154 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-
T ss_pred cccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCC
Confidence 4555666667889999999999987663 3221 111122233347778888889999999987653211
Q ss_pred ----------EEEEEEcCCCCEEEEEeCCCc-EEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 90 ----------VLSTAFTRDGKFFISASADHT-VRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 90 ----------v~~~~~s~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+..-....++ .+..++.++. +.+ |+.+++.+.... ...+.. ...+++..+++++.++.+..||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~ 230 (238)
T PF13360_consen 155 GSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYS-LPSVDGGTLYVTSSDGRLYALDLK 230 (238)
T ss_dssp SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECE-CEECCCTEEEEEETTTEEEEEETT
T ss_pred CCcceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccC-CceeeCCEEEEEeCCCEEEEEECC
Confidence 1111122244 5555665665 555 999998665433 333333 235677888888899999999999
Q ss_pred CCeeE
Q psy10953 159 PEEEV 163 (181)
Q Consensus 159 ~~~~~ 163 (181)
+++.+
T Consensus 231 tG~~~ 235 (238)
T PF13360_consen 231 TGKVV 235 (238)
T ss_dssp TTEEE
T ss_pred CCCEE
Confidence 98764
No 310
>KOG4714|consensus
Probab=98.08 E-value=3.6e-05 Score=56.21 Aligned_cols=63 Identities=17% Similarity=0.414 Sum_probs=51.5
Q ss_pred EEEEEECCCCCE-EEEeeCCCcEEEEeCCC---------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCC
Q psy10953 56 TLSIAYSTDGHW-IASGALDGIINIFDANT---------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFAR 118 (181)
Q Consensus 56 ~~~~~~s~d~~~-l~~~~~d~~v~i~d~~~---------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~ 118 (181)
+.+++-+|..+. +++|+.||.+.+||.+. .|+..+..+.|+| ++..|++++.||.+-.||..+
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 567788887654 56689999999999874 3667788899999 467999999999999999753
No 311
>KOG2041|consensus
Probab=98.05 E-value=5.8e-05 Score=62.26 Aligned_cols=101 Identities=21% Similarity=0.346 Sum_probs=82.4
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCC-----------------------CCcccEEEEEEcCCCCEEEEEeCCCcEE
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANT-----------------------GHSSWVLSTAFTRDGKFFISASADHTVR 112 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-----------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 112 (181)
..+++|.....+++.|+.||.+++..+.+ ||+..|.-+.|+.+.+.|-++..+|-|-
T Consensus 17 L~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIi 96 (1189)
T KOG2041|consen 17 LHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLII 96 (1189)
T ss_pred EEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEE
Confidence 35889999999999999999999987642 5778899999999999999999999999
Q ss_pred EEecCCCceee---eeecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 113 VWNFARRENMH---TFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 113 v~d~~~~~~~~---~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+|-+..+.=.. .-.....|.+++|..||..++..-.||.|-+=.
T Consensus 97 VWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGs 143 (1189)
T KOG2041|consen 97 VWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGS 143 (1189)
T ss_pred EEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEe
Confidence 99987664222 223445688999999999999888888875443
No 312
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.03 E-value=0.00043 Score=60.30 Aligned_cols=141 Identities=18% Similarity=0.304 Sum_probs=91.1
Q ss_pred EEEEEcCCCCEEEEEeC---C---CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC---CCcEEEEeCCC-
Q psy10953 15 WNVVFSPDDKYVLSGSQ---S---GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---DGIINIFDANT- 84 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~---d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---d~~v~i~d~~~- 84 (181)
..|+|-.||+++|+.+- + ..+|+|+-+ |.+...-..-..--..++|.|.|+++++... ...|.+|..+.
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGL 291 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGL 291 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCc
Confidence 57899999999997764 2 468999855 5543322211111126899999999988654 34566665431
Q ss_pred ----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee--e--eeecCCcEEEEEEccC-CCEEEEEcCC
Q psy10953 85 ----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM--H--TFKHADQVWCVCVAPD-GDKFVSVGED 149 (181)
Q Consensus 85 ----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~--~--~~~~~~~v~~~~~sp~-g~~l~~~~~d 149 (181)
.....|..+.|++++..|+....| .|.+|-..+..=. . .+.....+..+.|+|. ...|.....+
T Consensus 292 rhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~ 370 (928)
T PF04762_consen 292 RHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED-RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSN 370 (928)
T ss_pred EeeeEecCCCCCCceeeEEEECCCCCEEEEEecC-CceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecC
Confidence 234568999999999999887755 4999977654311 1 1222334555889985 4456666666
Q ss_pred CcEEEEeC
Q psy10953 150 KAVHMYSY 157 (181)
Q Consensus 150 ~~v~i~~~ 157 (181)
+.+..+++
T Consensus 371 g~~~~~~~ 378 (928)
T PF04762_consen 371 GQYEIYDF 378 (928)
T ss_pred CcEEEEEE
Confidence 77665554
No 313
>KOG1064|consensus
Probab=97.99 E-value=3.7e-05 Score=68.81 Aligned_cols=106 Identities=18% Similarity=0.324 Sum_probs=78.8
Q ss_pred eEEEEEECCCCCEEEEeeCCCcEEEEeCC---------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-------
Q psy10953 55 FTLSIAYSTDGHWIASGALDGIINIFDAN---------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR------- 118 (181)
Q Consensus 55 ~~~~~~~s~d~~~l~~~~~d~~v~i~d~~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~------- 118 (181)
.+.++.-+|...+.++|+.||.|++|.-. +.-...|..+.|+.+|+.+..+..||.+.+|....
T Consensus 2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~q 2289 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQ 2289 (2439)
T ss_pred ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceeccc
Confidence 34567778888889999999999999642 22235667778888888877777788888885310
Q ss_pred --------------------------------------CceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 119 --------------------------------------RENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 119 --------------------------------------~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
...++ .-|.+.++++++-|..+.|++||.+|.|++||++..
T Consensus 2290 chnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqr 2368 (2439)
T KOG1064|consen 2290 CHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQR 2368 (2439)
T ss_pred cCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHH
Confidence 00111 125667899999999999999999999999999765
Q ss_pred e
Q psy10953 161 E 161 (181)
Q Consensus 161 ~ 161 (181)
+
T Consensus 2369 q 2369 (2439)
T KOG1064|consen 2369 Q 2369 (2439)
T ss_pred H
Confidence 4
No 314
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.94 E-value=0.0041 Score=49.07 Aligned_cols=151 Identities=16% Similarity=0.197 Sum_probs=105.5
Q ss_pred EEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC---CCcEEEEeCCCCCc--
Q psy10953 14 MWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---DGIINIFDANTGHS-- 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---d~~v~i~d~~~~~~-- 87 (181)
...+++++.+..+. +...+..|.+.|..+.+.......-. ....+.++++++.+..+.. ++.+.+.|..+...
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~ 154 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA 154 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence 45778888888654 44456899999988887776554332 3457999999988776654 67888888764321
Q ss_pred -----ccEEEEEEcCCCCEEE-EEeCCCcEEEEecCCCceee-e----eecCCcEEEEEEccCCCEEEEEcCC---CcEE
Q psy10953 88 -----SWVLSTAFTRDGKFFI-SASADHTVRVWNFARRENMH-T----FKHADQVWCVCVAPDGDKFVSVGED---KAVH 153 (181)
Q Consensus 88 -----~~v~~~~~s~~~~~l~-~~~~d~~i~v~d~~~~~~~~-~----~~~~~~v~~~~~sp~g~~l~~~~~d---~~v~ 153 (181)
.....++++|+|+.+. +-..++.+.+.|........ . .........++++|+|+++++.... +.+.
T Consensus 155 ~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~ 234 (381)
T COG3391 155 TIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVL 234 (381)
T ss_pred EEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEE
Confidence 1226789999999554 44478899999977655442 1 2233456789999999977665544 5888
Q ss_pred EEeCCCCeeEEE
Q psy10953 154 MYSYKPEEEVEV 165 (181)
Q Consensus 154 i~~~~~~~~~~~ 165 (181)
..+..++.....
T Consensus 235 ~id~~~~~v~~~ 246 (381)
T COG3391 235 KIDTATGNVTAT 246 (381)
T ss_pred EEeCCCceEEEe
Confidence 888877665553
No 315
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.92 E-value=0.0027 Score=50.59 Aligned_cols=147 Identities=9% Similarity=0.145 Sum_probs=97.1
Q ss_pred eeeEEEEEEcCCCCE--EE-----EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee-----C-----
Q psy10953 11 PVDMWNVVFSPDDKY--VL-----SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA-----L----- 73 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~--l~-----~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-----~----- 73 (181)
+..+...+|||.|+. |+ ..+..+.+++|.+..++.+.........-..+.|.+.|++|+.-- .
T Consensus 173 ~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyf 252 (561)
T COG5354 173 PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYF 252 (561)
T ss_pred ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeeccccee
Confidence 355778889987543 44 356778999999987766543332222234789999998776421 1
Q ss_pred -CCcEEEEeCCC-------CCcccEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEE
Q psy10953 74 -DGIINIFDANT-------GHSSWVLSTAFTRDGKFFISAS--ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 74 -d~~v~i~d~~~-------~~~~~v~~~~~s~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l 143 (181)
...++++++.. .-.+.|...+|.|.++.+++.+ ....+.++|++.. +..+-.+..=+.+.|||.++++
T Consensus 253 gesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~i 330 (561)
T COG5354 253 GESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHERYI 330 (561)
T ss_pred ccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc--eEEecCCcccccccccCcccEE
Confidence 24567777642 2356789999999988666555 5778899998775 3333334445667788888887
Q ss_pred EEEcCC---CcEEEEeCCC
Q psy10953 144 VSVGED---KAVHMYSYKP 159 (181)
Q Consensus 144 ~~~~~d---~~v~i~~~~~ 159 (181)
+.++-| |.+-+|+...
T Consensus 331 l~agF~nl~gni~i~~~~~ 349 (561)
T COG5354 331 LFAGFDNLQGNIEIFDPAG 349 (561)
T ss_pred EEecCCccccceEEeccCC
Confidence 776654 4677777643
No 316
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.91 E-value=0.0007 Score=56.20 Aligned_cols=140 Identities=9% Similarity=0.009 Sum_probs=83.3
Q ss_pred eEEEEEEcCCCCEEEEEe------CCC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-----------
Q psy10953 13 DMWNVVFSPDDKYVLSGS------QSG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL----------- 73 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~------~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~----------- 73 (181)
.+.+.++||||+.++... .|. .|.+++. .+....+... .......|+|||+++.+...
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~ 427 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDP 427 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccC
Confidence 467889999999987655 244 4555554 3333333332 22456899999887766532
Q ss_pred -CCcEEEEeCCCCC-----cccEEEEEEcCCCCEEEEEeCCCcEEE---EecCCCce-e---eeee--cCCcEEEEEEcc
Q psy10953 74 -DGIINIFDANTGH-----SSWVLSTAFTRDGKFFISASADHTVRV---WNFARREN-M---HTFK--HADQVWCVCVAP 138 (181)
Q Consensus 74 -d~~v~i~d~~~~~-----~~~v~~~~~s~~~~~l~~~~~d~~i~v---~d~~~~~~-~---~~~~--~~~~v~~~~~sp 138 (181)
.+.+++.++..+. ...|..+.|||||+.++... ++.|++ -....+.. + ..+. ....+..+.|.+
T Consensus 428 ~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~ 506 (591)
T PRK13616 428 ATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRT 506 (591)
T ss_pred CCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEec
Confidence 2344444554332 34689999999999887766 467776 33333331 1 1111 223357889999
Q ss_pred CCCEEEEEcCCCcEEEEeC
Q psy10953 139 DGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 139 ~g~~l~~~~~d~~v~i~~~ 157 (181)
++..+ .+..+....+|.+
T Consensus 507 ~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 507 GDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred CCEEE-EEecCCCCceEEE
Confidence 98855 4444444445554
No 317
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.89 E-value=0.0057 Score=46.39 Aligned_cols=133 Identities=19% Similarity=0.280 Sum_probs=87.9
Q ss_pred EEEEEcCCCCEEEEEeC------------------CCcEEEEeCCCCcEEEEEec----CCceEEEEEECCCCCEEEEee
Q psy10953 15 WNVVFSPDDKYVLSGSQ------------------SGKINLYGVETGKLEQIFDT----RGKFTLSIAYSTDGHWIASGA 72 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~------------------d~~i~~~d~~~~~~~~~~~~----~~~~~~~~~~s~d~~~l~~~~ 72 (181)
..+.+.|||+.|+.+.. +..+...|..+|+++..... +.-.+.-++++++|..++..-
T Consensus 102 Hel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q 181 (305)
T PF07433_consen 102 HELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQ 181 (305)
T ss_pred hhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEe
Confidence 35678999988876642 23577788889988765433 333455688888888666544
Q ss_pred CCC-------cEEEEeCCC-------------CCcccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCceeeeeecCCcE
Q psy10953 73 LDG-------IINIFDANT-------------GHSSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARRENMHTFKHADQV 131 (181)
Q Consensus 73 ~d~-------~v~i~d~~~-------------~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~v 131 (181)
..+ .+.+++... .-..++-++++++++.+++..+ ..+.+.+||..++..+......+ +
T Consensus 182 ~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D-~ 260 (305)
T PF07433_consen 182 YQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPD-A 260 (305)
T ss_pred cCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCc-e
Confidence 332 223332211 1346899999999999876666 46778999999998777666543 5
Q ss_pred EEEEEccCCCEEEEEcCC
Q psy10953 132 WCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d 149 (181)
..++-.+++ ++++.+..
T Consensus 261 cGva~~~~~-f~~ssG~G 277 (305)
T PF07433_consen 261 CGVAPTDDG-FLVSSGQG 277 (305)
T ss_pred eeeeecCCc-eEEeCCCc
Confidence 566666666 55555543
No 318
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.87 E-value=0.0012 Score=56.05 Aligned_cols=125 Identities=14% Similarity=0.188 Sum_probs=84.3
Q ss_pred eCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCC-------CCEEEEeeCCCcEEEEeCCCCCc-------------cc
Q psy10953 30 SQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTD-------GHWIASGALDGIINIFDANTGHS-------------SW 89 (181)
Q Consensus 30 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d-------~~~l~~~~~d~~v~i~d~~~~~~-------------~~ 89 (181)
.....++-.|++.|+++..+..+.... -..+.|+ ....+.|-.++.+..||.+.... ..
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~-v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~ 579 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIP-VVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNN 579 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcc-eeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCC
Confidence 345788899999999998888765431 2344443 23356677888999999874321 11
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 90 VLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
-.+++-+.+|. +|.|+.+|.|++||--....-..++ ...+|.++..+.||+++++.+ +..+.+++.
T Consensus 580 Fs~~aTt~~G~-iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 580 FSCFATTEDGY-IAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ceEEEecCCce-EEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 23455555554 6889999999999943222111222 467899999999999998777 456666664
No 319
>KOG3621|consensus
Probab=97.85 E-value=0.00014 Score=59.59 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=81.5
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCC---------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee--
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANTG---------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT-- 124 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~-- 124 (181)
+.--+++..+++++.|+.-|.+++|+...+ ..+.+.....+++..++|.+++.+.|.++-+....+...
T Consensus 36 v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~ 115 (726)
T KOG3621|consen 36 VKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDY 115 (726)
T ss_pred EEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCccee
Confidence 334467778899999999999999987543 234456677899999999999999999997755322211
Q ss_pred ---e--ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 125 ---F--KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 125 ---~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
. .|...|++++|++++..+++|...|.|.+-.+..
T Consensus 116 ~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 116 VTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred eccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 1 2567899999999999999999999998877765
No 320
>KOG1645|consensus
Probab=97.85 E-value=5.5e-05 Score=58.27 Aligned_cols=75 Identities=16% Similarity=0.320 Sum_probs=64.2
Q ss_pred CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCC-EEEEEcCCCcEEEEeCCC
Q psy10953 85 GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGD-KFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 85 ~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~~v~i~~~~~ 159 (181)
++...|.+++|||..+ ++..++.+..|++.|+.+......+.....+|+++|..|.+ +|++|-.+|.|.+||++.
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 4566789999999988 78888999999999999988888887668999999998865 467777899999999864
No 321
>KOG1008|consensus
Probab=97.85 E-value=4.7e-06 Score=67.46 Aligned_cols=146 Identities=18% Similarity=0.219 Sum_probs=100.0
Q ss_pred eeeEEEEEEcCCC--CEEEEEeCCCcEEEEeCCCCcEE-EE-EecCCceEEEEEECC-CCCEEEEee----CCCcEEEEe
Q psy10953 11 PVDMWNVVFSPDD--KYVLSGSQSGKINLYGVETGKLE-QI-FDTRGKFTLSIAYST-DGHWIASGA----LDGIINIFD 81 (181)
Q Consensus 11 ~~~~~~~~~s~~g--~~l~~~~~d~~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~s~-d~~~l~~~~----~d~~v~i~d 81 (181)
-.++.++++..+. .+++.|..+|.|.+-..+..... .. ...+.....+++|++ |.++||+|- .|..+.+||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 3446677766544 46789999999999877643322 11 122233445678876 567777773 467899999
Q ss_pred CCCCC-------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEcc-CCCEEEEEc
Q psy10953 82 ANTGH-------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAP-DGDKFVSVG 147 (181)
Q Consensus 82 ~~~~~-------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~ 147 (181)
+.+.. ......+.|..+.+++.+|.....++++|++........-.+..+.++.++| .++++++..
T Consensus 136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~ 215 (783)
T KOG1008|consen 136 INSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS 215 (783)
T ss_pred cccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc
Confidence 87541 1223466777888899999999999999998654443333445677788888 777777666
Q ss_pred CCCcEEEEeC
Q psy10953 148 EDKAVHMYSY 157 (181)
Q Consensus 148 ~d~~v~i~~~ 157 (181)
|+.|.+||.
T Consensus 216 -dg~iAiwD~ 224 (783)
T KOG1008|consen 216 -DGDIAIWDT 224 (783)
T ss_pred -cCceeeccc
Confidence 899999993
No 322
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.80 E-value=0.007 Score=44.83 Aligned_cols=152 Identities=13% Similarity=0.160 Sum_probs=87.7
Q ss_pred cCeeeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCC-ceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 9 VGPVDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRG-KFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
.-...++.++|.|+.+.| ++....+.|..++. +|+++..+...+ .....+++..++.++++--.++.+.++++..
T Consensus 19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~ 97 (248)
T PF06977_consen 19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDT 97 (248)
T ss_dssp T--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----
T ss_pred CccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccc
Confidence 334458999999986654 56666778877786 478877766543 2356788887777666555678888777621
Q ss_pred -----------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC---Cceeeee-----e----cCCcEEEEE
Q psy10953 85 -----------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR---RENMHTF-----K----HADQVWCVC 135 (181)
Q Consensus 85 -----------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~-----~----~~~~v~~~~ 135 (181)
.++...-.++|+|.++.|+.+-......+|.+.. ...+... . ....+.+++
T Consensus 98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~ 177 (248)
T PF06977_consen 98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLS 177 (248)
T ss_dssp TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEE
T ss_pred cccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceE
Confidence 1223467799999877666666666666776543 1111111 1 223578899
Q ss_pred EccCCCE-EEEEcCCCcEEEEeCCCCee
Q psy10953 136 VAPDGDK-FVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 136 ~sp~g~~-l~~~~~d~~v~i~~~~~~~~ 162 (181)
++|.... ++.....+.+..++. .|+.
T Consensus 178 ~~p~t~~lliLS~es~~l~~~d~-~G~~ 204 (248)
T PF06977_consen 178 YDPRTGHLLILSDESRLLLELDR-QGRV 204 (248)
T ss_dssp EETTTTEEEEEETTTTEEEEE-T-T--E
T ss_pred EcCCCCeEEEEECCCCeEEEECC-CCCE
Confidence 9997554 555556778888884 4544
No 323
>KOG0309|consensus
Probab=97.80 E-value=0.00013 Score=60.39 Aligned_cols=151 Identities=15% Similarity=0.324 Sum_probs=103.5
Q ss_pred ccCeeeEEEEEEcCCC---CEEEEEeCCCcEEEEeCC---CCcEEEEEecCCceEEEEEECCCC-CEEEEeeCCCcEEEE
Q psy10953 8 NVGPVDMWNVVFSPDD---KYVLSGSQSGKINLYGVE---TGKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDGIINIF 80 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g---~~l~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~ 80 (181)
+..|-.+-+..|+|.. .++++.+.. .-.+|++. +..+...+-.|+..+..+.|.|+. ..+++.+-|..++.|
T Consensus 64 h~tpw~vad~qws~h~a~~~wiVsts~q-kaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~w 142 (1081)
T KOG0309|consen 64 HITPWQVADVQWSPHPAKPYWIVSTSNQ-KAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAW 142 (1081)
T ss_pred ccCcchhcceecccCCCCceeEEecCcc-hhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceee
Confidence 3445556677777643 345555544 44567764 233344555677778889999876 467888999999999
Q ss_pred eCCCCCcc---------cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc-eeeeee-cCCcEEEEEEccC-CCEEEEEcC
Q psy10953 81 DANTGHSS---------WVLSTAFTRDGKFFISASADHTVRVWNFARRE-NMHTFK-HADQVWCVCVAPD-GDKFVSVGE 148 (181)
Q Consensus 81 d~~~~~~~---------~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~-~~~~v~~~~~sp~-g~~l~~~~~ 148 (181)
|.+..|.. .-..++|+...-.+++.+....|.+||++-+. +++..+ |...+++++|..- ...+.+++.
T Consensus 143 d~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~ 222 (1081)
T KOG0309|consen 143 DMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSN 222 (1081)
T ss_pred eccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCC
Confidence 99876642 23456787755445566778899999998764 555554 6667888877643 345788889
Q ss_pred CCcEEEEeCCC
Q psy10953 149 DKAVHMYSYKP 159 (181)
Q Consensus 149 d~~v~i~~~~~ 159 (181)
|++|+.|++..
T Consensus 223 d~tvkfw~y~k 233 (1081)
T KOG0309|consen 223 DGTVKFWDYSK 233 (1081)
T ss_pred CCceeeecccc
Confidence 99999999853
No 324
>KOG1920|consensus
Probab=97.78 E-value=0.0029 Score=55.23 Aligned_cols=149 Identities=15% Similarity=0.223 Sum_probs=93.2
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC----C-------------------CcEEEEEecCC--------------
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVE----T-------------------GKLEQIFDTRG-------------- 53 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~----~-------------------~~~~~~~~~~~-------------- 53 (181)
...+.+++||||++.++.....+++.+-+.. . |+....|....
T Consensus 109 d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~ 188 (1265)
T KOG1920|consen 109 DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKA 188 (1265)
T ss_pred cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccccc
Confidence 3457889999999999888877777655321 0 11111121100
Q ss_pred -------ceEEEEEECCCCCEEEEe-----eCCCcEEEEeCCCC--C-----cccEEEEEEcCCCCEEEEEeC---CCcE
Q psy10953 54 -------KFTLSIAYSTDGHWIASG-----ALDGIINIFDANTG--H-----SSWVLSTAFTRDGKFFISASA---DHTV 111 (181)
Q Consensus 54 -------~~~~~~~~s~d~~~l~~~-----~~d~~v~i~d~~~~--~-----~~~v~~~~~s~~~~~l~~~~~---d~~i 111 (181)
..-.+++|--||+++++. .....+++||.+.. + .+.-.+++|-|.|.++++-.. +..|
T Consensus 189 ~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~I 268 (1265)
T KOG1920|consen 189 LEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDI 268 (1265)
T ss_pred ccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcE
Confidence 001248899999998873 23379999998721 1 112246899999998887543 4568
Q ss_pred EEEecCC---Cceeeeee-cCCcEEEEEEccCCCEEEE---EcCCCcEEEEeCCC
Q psy10953 112 RVWNFAR---RENMHTFK-HADQVWCVCVAPDGDKFVS---VGEDKAVHMYSYKP 159 (181)
Q Consensus 112 ~v~d~~~---~~~~~~~~-~~~~v~~~~~sp~g~~l~~---~~~d~~v~i~~~~~ 159 (181)
.+|.-.. +.-...++ ...++..++|+.++..|+. ......|++|....
T Consensus 269 vffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 269 VFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred EEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 8885322 22111222 2234889999999999887 44555699998643
No 325
>KOG4640|consensus
Probab=97.78 E-value=0.00016 Score=58.66 Aligned_cols=77 Identities=18% Similarity=0.355 Sum_probs=64.5
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEE-EEEECCCCCEEEEeeCCCcEEEEeCCCCCc
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTL-SIAYSTDGHWIASGALDGIINIFDANTGHS 87 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~ 87 (181)
-+..+.-+.|+|.-.++|++..+|++.+..+. .+.+..+..++..+. +++|.|||+.|+.|-.||++++.|+.+++.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR 96 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence 45556778999999999999999999999888 555566665555554 899999999999999999999999988763
No 326
>KOG1275|consensus
Probab=97.78 E-value=0.00031 Score=59.42 Aligned_cols=131 Identities=13% Similarity=0.185 Sum_probs=87.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC--------CcccEEEE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG--------HSSWVLST 93 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~--------~~~~v~~~ 93 (181)
++..++-|+.-..+..+|+++.+..+.......-+.-++ .+++.+.+|...|+|.+-|+++. |.+.+.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siS-- 221 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSIS-- 221 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeecccccee--
Confidence 445666676677888899999988777665443333344 36788999999999999999753 555553
Q ss_pred EEcCCCCEEEEEeC---------CCcEEEEecCCCceeeeeecCCcEEEEEEccC-CCEEEEEcCCCcEEEEe
Q psy10953 94 AFTRDGKFFISASA---------DHTVRVWNFARRENMHTFKHADQVWCVCVAPD-GDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 94 ~~s~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~~~~~d~~v~i~~ 156 (181)
.|+-.|++|++|+. |..|+|||++.-+.+.-+..+....-+.|+|. ...+++++..|..++-+
T Consensus 222 DfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 222 DFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVD 294 (1118)
T ss_pred eeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeecc
Confidence 46778999999886 45789999987655444332222334555554 23455555556655544
No 327
>KOG3621|consensus
Probab=97.73 E-value=0.00041 Score=57.06 Aligned_cols=105 Identities=19% Similarity=0.337 Sum_probs=80.9
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-------- 84 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-------- 84 (181)
+.-=+++..+++++.|+.-|.+.+|+-.+++....-. .....+...+.|++..++|.|+..|.|.++-+..
T Consensus 36 v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~ 115 (726)
T KOG3621|consen 36 VKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDY 115 (726)
T ss_pred EEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCccee
Confidence 3334467789999999999999999877666543222 1233344568899889889999999999997642
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR 118 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 118 (181)
.|...|+++.|+++++.+.+|...|+|..-.+..
T Consensus 116 ~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 116 VTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred eccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 2567899999999999999999999988776544
No 328
>KOG1008|consensus
Probab=97.71 E-value=9.3e-06 Score=65.82 Aligned_cols=145 Identities=13% Similarity=0.319 Sum_probs=95.2
Q ss_pred eEEEEEEcC-CCCEEEEEeC----CCcEEEEeCCCCc----EEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 13 DMWNVVFSP-DDKYVLSGSQ----SGKINLYGVETGK----LEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 13 ~~~~~~~s~-~g~~l~~~~~----d~~i~~~d~~~~~----~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+.+++|.+ |-++||+|-+ |..+.+||+.++- ....|.. ......+++|-.+.+++.+|+....+.++|+
T Consensus 104 ~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdl 183 (783)
T KOG1008|consen 104 PCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDL 183 (783)
T ss_pred cccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhh
Confidence 467788887 5566766642 4579999998761 1223332 1122236788889999999999999999998
Q ss_pred CCC-------CcccEEEEEEcC-CCCEEEEEeCCCcEEEEec-CCCc-eeeeee-----cCCcEEEEEEccCCC-EEEEE
Q psy10953 83 NTG-------HSSWVLSTAFTR-DGKFFISASADHTVRVWNF-ARRE-NMHTFK-----HADQVWCVCVAPDGD-KFVSV 146 (181)
Q Consensus 83 ~~~-------~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~-~~~~-~~~~~~-----~~~~v~~~~~sp~g~-~l~~~ 146 (181)
+.. .+..+..+..+| .+.++++ ..|+.|.+||. +.-+ ++..+. .++.+..+++.|... .+++.
T Consensus 184 Rqs~~~~~svnTk~vqG~tVdp~~~nY~cs-~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l 262 (783)
T KOG1008|consen 184 RQSLDSVSSVNTKYVQGITVDPFSPNYFCS-NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVL 262 (783)
T ss_pred hhhhhhhhhhhhhhcccceecCCCCCceec-cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhh
Confidence 732 234567788888 6667654 44999999993 3322 222222 233588899988643 45555
Q ss_pred cCC-CcEEEEeCC
Q psy10953 147 GED-KAVHMYSYK 158 (181)
Q Consensus 147 ~~d-~~v~i~~~~ 158 (181)
+.| +.|++|++.
T Consensus 263 ~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 263 SRDSITIRLYDIC 275 (783)
T ss_pred ccCcceEEEeccc
Confidence 554 688998874
No 329
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.70 E-value=0.00011 Score=36.41 Aligned_cols=37 Identities=32% Similarity=0.524 Sum_probs=31.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYG 39 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d 39 (181)
.+..+..+...+.++.|+++++.+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455566667789999999999999999999999996
No 330
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.69 E-value=0.0047 Score=39.66 Aligned_cols=95 Identities=17% Similarity=0.221 Sum_probs=59.3
Q ss_pred EEEEEEc---CCC-CEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 14 MWNVVFS---PDD-KYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 14 ~~~~~~s---~~g-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
|.++++. -|| +.|++|+.|..||+|+-. ..+..+..... +.++.-... ..|+++..+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~-v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRi 77 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDK-VTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRI 77 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccc-eEEEEEcCC-CEEEEEecCCEEEEEeCcceeeee
Confidence 3445544 333 468999999999999743 55555544344 446655554 5688888888888776531
Q ss_pred CCcccEEEEE-EcCCC---CEEEEEeCCCcEE
Q psy10953 85 GHSSWVLSTA-FTRDG---KFFISASADHTVR 112 (181)
Q Consensus 85 ~~~~~v~~~~-~s~~~---~~l~~~~~d~~i~ 112 (181)
+.+..+.+++ ++.++ ..|++|..+|.|-
T Consensus 78 KSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 78 KSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 1222344443 44443 3788999988774
No 331
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.69 E-value=0.0018 Score=51.20 Aligned_cols=139 Identities=11% Similarity=0.130 Sum_probs=79.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEE--------
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLST-------- 93 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~-------- 93 (181)
++..++.++.++.+..+|.++|+..-.....+........ .+..++.+..++.+.-+|..++...+-...
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~ 196 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLR 196 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCccccc
Confidence 3456677888999999999999987655443322111122 234566677788899999887654322111
Q ss_pred -EEcC--CCCEEEEEeCCCcEEEEecCCCceeeeeecCCc--------EEEEEEcc--CCCEEEEEcCCCcEEEEeCCCC
Q psy10953 94 -AFTR--DGKFFISASADHTVRVWNFARRENMHTFKHADQ--------VWCVCVAP--DGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 94 -~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~--------v~~~~~sp--~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.-+| .+..++.++.++.+..+|..+++.........+ ...+.-+| .+..++.++.++.+..+|..++
T Consensus 197 ~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG 276 (394)
T PRK11138 197 GESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSG 276 (394)
T ss_pred CCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCC
Confidence 0122 123455667788898888888776554321100 00111122 2345555556666666666655
Q ss_pred ee
Q psy10953 161 EE 162 (181)
Q Consensus 161 ~~ 162 (181)
++
T Consensus 277 ~~ 278 (394)
T PRK11138 277 QI 278 (394)
T ss_pred CE
Confidence 43
No 332
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.68 E-value=0.0038 Score=48.68 Aligned_cols=160 Identities=18% Similarity=0.286 Sum_probs=86.6
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC------------------ceEEEEEECCCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG------------------KFTLSIAYSTDGH 66 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------------------~~~~~~~~s~d~~ 66 (181)
..+...........|||+|+.++... ++.|.+++..+++..++.. .+ .....+-||||++
T Consensus 36 ~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~-dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~ 113 (353)
T PF00930_consen 36 TPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTT-DGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSK 113 (353)
T ss_dssp EESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES---TTTEEESB--HHHHHHTSSSSBSEEE-TTSS
T ss_pred EECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEecc-ccceeEEcCccceeccccccccccceEECCCCC
Confidence 34444445567889999999998875 6799999988775544322 11 0113578999999
Q ss_pred EEEEeeCC-Cc-----------------------------------EEEEeCCCCC-------------cccEEEEEEcC
Q psy10953 67 WIASGALD-GI-----------------------------------INIFDANTGH-------------SSWVLSTAFTR 97 (181)
Q Consensus 67 ~l~~~~~d-~~-----------------------------------v~i~d~~~~~-------------~~~v~~~~~s~ 97 (181)
+|+....| .. +.++|+.++. ...+..+.|.+
T Consensus 114 ~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~ 193 (353)
T PF00930_consen 114 YLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSP 193 (353)
T ss_dssp EEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEE
T ss_pred EEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecC
Confidence 99865432 22 2233433322 12466789999
Q ss_pred CCCEEEEE--eCCC---cEEEEecCCCceeeeee--cCCcE---EEEEEc-cCCCEE-EEEcCCCc--EEEEeCCCCeeE
Q psy10953 98 DGKFFISA--SADH---TVRVWNFARRENMHTFK--HADQV---WCVCVA-PDGDKF-VSVGEDKA--VHMYSYKPEEEV 163 (181)
Q Consensus 98 ~~~~l~~~--~~d~---~i~v~d~~~~~~~~~~~--~~~~v---~~~~~s-p~g~~l-~~~~~d~~--v~i~~~~~~~~~ 163 (181)
+++.++.. +.+. .+.++|..++....... ....+ ....+. +++..+ .....+|. |++++...+...
T Consensus 194 d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~ 273 (353)
T PF00930_consen 194 DGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR 273 (353)
T ss_dssp TTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE
T ss_pred CCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee
Confidence 98833332 2332 36667776654332222 22211 234444 666554 44446665 445555544433
Q ss_pred EEc
Q psy10953 164 EVN 166 (181)
Q Consensus 164 ~~~ 166 (181)
.+.
T Consensus 274 ~lT 276 (353)
T PF00930_consen 274 QLT 276 (353)
T ss_dssp ESS
T ss_pred ccc
Confidence 333
No 333
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.0049 Score=47.14 Aligned_cols=133 Identities=18% Similarity=0.235 Sum_probs=83.5
Q ss_pred EEEEEcCCCCEEEEEeC-----C----CcEEEEeCC-CCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCC
Q psy10953 15 WNVVFSPDDKYVLSGSQ-----S----GKINLYGVE-TGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFDAN 83 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~-----d----~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~ 83 (181)
.++...|+|.+-++.-. . ..-.+|.+. .+..+..+..+-....+++||||++.|+.... .+.++-|+..
T Consensus 114 ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 114 NDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred CceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 45777889887665433 1 112455554 56665555443334458999999998887765 4777777664
Q ss_pred C--C-------------CcccEEEEEEcCCCCEEEEEeCCC-cEEEEecCCCceeeeeecC-CcEEEEEEc-cCCCEEEE
Q psy10953 84 T--G-------------HSSWVLSTAFTRDGKFFISASADH-TVRVWNFARRENMHTFKHA-DQVWCVCVA-PDGDKFVS 145 (181)
Q Consensus 84 ~--~-------------~~~~v~~~~~s~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~-~~v~~~~~s-p~g~~l~~ 145 (181)
. + +.+..-.++.+.+|.+.+++..++ .|..|+.. ++.+..+..+ ..+.+++|- |+.+.|+.
T Consensus 194 ~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~i 272 (307)
T COG3386 194 PATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYI 272 (307)
T ss_pred cccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEE
Confidence 1 1 112233456667788775444443 89999888 7778777755 677888885 55566655
Q ss_pred EcC
Q psy10953 146 VGE 148 (181)
Q Consensus 146 ~~~ 148 (181)
.+.
T Consensus 273 Ts~ 275 (307)
T COG3386 273 TSA 275 (307)
T ss_pred Eec
Confidence 553
No 334
>KOG3617|consensus
Probab=97.66 E-value=0.00037 Score=58.75 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=62.8
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
|..+.+++|+|..-.|+.|-..|.+.+|...+.+.......|...+..+.||++|..+.++..-|.|.+|...
T Consensus 59 P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 59 PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 3345678999998889999999999999988888777766777778889999999999999999999999764
No 335
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.61 E-value=0.023 Score=45.23 Aligned_cols=104 Identities=21% Similarity=0.296 Sum_probs=67.2
Q ss_pred EEEEEcCCCCEEEEE-eCC----CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC-----------cEE
Q psy10953 15 WNVVFSPDDKYVLSG-SQS----GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG-----------IIN 78 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~-~~d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~-----------~v~ 78 (181)
...++||||+++|.+ +.. .+++++|+++++.+......... ..+.|.+|++.|+....+. .|+
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~-~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF-SSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES-EEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc-ceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 467899999999854 222 36999999999876432111121 2389999999887765433 377
Q ss_pred EEeCCCCC-----------ccc-EEEEEEcCCCCEEEEEe-CC---CcEEEEecCCC
Q psy10953 79 IFDANTGH-----------SSW-VLSTAFTRDGKFFISAS-AD---HTVRVWNFARR 119 (181)
Q Consensus 79 i~d~~~~~-----------~~~-v~~~~~s~~~~~l~~~~-~d---~~i~v~d~~~~ 119 (181)
.|.+.+.. ... ...+..++++++++... .. ..+++.|+...
T Consensus 206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 77765421 122 56788999999766433 32 34777787764
No 336
>KOG4190|consensus
Probab=97.60 E-value=0.0002 Score=57.63 Aligned_cols=146 Identities=15% Similarity=0.294 Sum_probs=97.2
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE-EEec--C--CceEEEEEECCCCCEEEEe-eCCCcEEEEe
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ-IFDT--R--GKFTLSIAYSTDGHWIASG-ALDGIINIFD 81 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~-~~~~--~--~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d 81 (181)
+.+...+.++.|-.+-++++++ |+-|.+||---++.+. .... + +..+.++. +-+...+++| +...+|+++|
T Consensus 781 ~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~D 857 (1034)
T KOG4190|consen 781 QAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFD 857 (1034)
T ss_pred hhccCcccceeeeeccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeee
Confidence 4566677788888887777765 7999999976665543 2221 2 22333322 2244444444 6788999999
Q ss_pred CCCC-------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCC-cEEEEEEccCCCEEEEEc
Q psy10953 82 ANTG-------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHAD-QVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 82 ~~~~-------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp~g~~l~~~~ 147 (181)
.+.+ ....+++++.-+.|++++.+-.+|.|.+.|.++++.+..+.... ...-++ .|..+.++...
T Consensus 858 aRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~sa 936 (1034)
T KOG4190|consen 858 ARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSA 936 (1034)
T ss_pred cccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhc
Confidence 8753 23457889999999999999999999999999999887765322 122222 35556666666
Q ss_pred CCCcEEE-EeC
Q psy10953 148 EDKAVHM-YSY 157 (181)
Q Consensus 148 ~d~~v~i-~~~ 157 (181)
.|..+.+ |..
T Consensus 937 ldHslaVnWha 947 (1034)
T KOG4190|consen 937 LDHSLAVNWHA 947 (1034)
T ss_pred ccceeEeeehh
Confidence 6766666 653
No 337
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.56 E-value=0.0057 Score=48.41 Aligned_cols=129 Identities=13% Similarity=0.119 Sum_probs=82.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEE-----EEEcC
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLS-----TAFTR 97 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~-----~~~s~ 97 (181)
+..++.++.++.+..+|..+|+.+-....... ..+ ..++..++.++.++.+..+|..++...+-.. ..-+|
T Consensus 256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~--~~~--~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp 331 (394)
T PRK11138 256 GGVVYALAYNGNLVALDLRSGQIVWKREYGSV--NDF--AVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAP 331 (394)
T ss_pred CCEEEEEEcCCeEEEEECCCCCEEEeecCCCc--cCc--EEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCC
Confidence 45666777899999999999987543322111 111 1245667777888888888887664321100 00112
Q ss_pred --CCCEEEEEeCCCcEEEEecCCCceeeeeec-CCcEEE-EEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 98 --DGKFFISASADHTVRVWNFARRENMHTFKH-ADQVWC-VCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 98 --~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~v~~-~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
.+..++.++.+|.++.+|..+++.+..... ...+.+ ..+ .+..|+.++.+|.++.++.
T Consensus 332 ~v~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 332 VLYNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 245667788899999999999988777653 233332 222 2457888899999887764
No 338
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=97.56 E-value=0.012 Score=46.18 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=78.0
Q ss_pred eeeeccC--eeeEEEEEEcCCCCEEEEEe-----------CCC-cEEEEeCC--CCcEE--EEEecCCceEEEEEECCCC
Q psy10953 4 ISKINVG--PVDMWNVVFSPDDKYVLSGS-----------QSG-KINLYGVE--TGKLE--QIFDTRGKFTLSIAYSTDG 65 (181)
Q Consensus 4 ~~~~~~~--~~~~~~~~~s~~g~~l~~~~-----------~d~-~i~~~d~~--~~~~~--~~~~~~~~~~~~~~~s~d~ 65 (181)
+..++.+ -.....|+|.++|+++++-. ..+ .|.+++-. +++.. ..+...-.....+++.++|
T Consensus 4 ~~l~A~~p~~~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G 83 (367)
T TIGR02604 4 VTLFAAEPLLRNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG 83 (367)
T ss_pred EEEEECCCccCCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC
Confidence 4444544 34467899999999877653 223 67666543 34432 3333222234578888888
Q ss_pred CEEEEeeCCCcEEEEeCCC-----------------C---CcccEEEEEEcCCCCEEEEEeCC-----------------
Q psy10953 66 HWIASGALDGIINIFDANT-----------------G---HSSWVLSTAFTRDGKFFISASAD----------------- 108 (181)
Q Consensus 66 ~~l~~~~~d~~v~i~d~~~-----------------~---~~~~v~~~~~s~~~~~l~~~~~d----------------- 108 (181)
.++ +......++.|... . +......++|.|+|++.++.+..
T Consensus 84 -lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~ 161 (367)
T TIGR02604 84 -VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQG 161 (367)
T ss_pred -EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccc
Confidence 444 33333222333311 0 12235678899999977765521
Q ss_pred --CcEEEEecCCCceeeeeec-CCcEEEEEEccCCCEEEEEc
Q psy10953 109 --HTVRVWNFARRENMHTFKH-ADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 109 --~~i~v~d~~~~~~~~~~~~-~~~v~~~~~sp~g~~l~~~~ 147 (181)
+.|.-++....+ +..+.. ....+.++|+|+|+.+++-.
T Consensus 162 ~~g~i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 162 LGGGLFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred cCceEEEEecCCCe-EEEEecCcCCCccceECCCCCEEEEcc
Confidence 335555554433 222221 22367899999998877644
No 339
>KOG2114|consensus
Probab=97.55 E-value=0.0067 Score=51.32 Aligned_cols=142 Identities=17% Similarity=0.246 Sum_probs=90.7
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC-CEEEEeeCCC-----cEEEEeCCCC-------
Q psy10953 19 FSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG-HWIASGALDG-----IINIFDANTG------- 85 (181)
Q Consensus 19 ~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d~-----~v~i~d~~~~------- 85 (181)
|++.+..++.|+.+|.|.+++-. -+.++-|+.....+...-+..++ ..|++.+.|. .+++|+++.-
T Consensus 31 ~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~ 109 (933)
T KOG2114|consen 31 CSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQ 109 (933)
T ss_pred EcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcc
Confidence 68899999999999999988643 34435555444332233334344 5677765543 5899998532
Q ss_pred --------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEe--cCCCc-eeeeee--cCCcEEEEEEccCCCEEEEE
Q psy10953 86 --------------HSSWVLSTAFTRDGKFFISASADHTVRVWN--FARRE-NMHTFK--HADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 86 --------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d--~~~~~-~~~~~~--~~~~v~~~~~sp~g~~l~~~ 146 (181)
...++..++.+.+-+.+|+|-.+|.|..+- +.+.+ ....+. ...+|+++++-.+++.++-+
T Consensus 110 c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv 189 (933)
T KOG2114|consen 110 CLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFV 189 (933)
T ss_pred eeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEE
Confidence 112345667777778899999999999884 22211 112222 35679999999888873333
Q ss_pred cCCCcEEEEeCCCCe
Q psy10953 147 GEDKAVHMYSYKPEE 161 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~ 161 (181)
..-..|.+|.+....
T Consensus 190 ~Tt~~V~~y~l~gr~ 204 (933)
T KOG2114|consen 190 ATTEQVMLYSLSGRT 204 (933)
T ss_pred EecceeEEEEecCCC
Confidence 334578888886333
No 340
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.54 E-value=0.00052 Score=33.78 Aligned_cols=28 Identities=39% Similarity=0.673 Sum_probs=14.4
Q ss_pred ceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 54 KFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 54 ~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
..+.++.|++++..+++++.|+.+++|+
T Consensus 13 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 13 GPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3344555555555555555555555553
No 341
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.53 E-value=0.00099 Score=50.18 Aligned_cols=149 Identities=18% Similarity=0.320 Sum_probs=97.9
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----cEEEEEecCCc------------eEEEEEECCCC--CEEEE
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG-----KLEQIFDTRGK------------FTLSIAYSTDG--HWIAS 70 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~------------~~~~~~~s~d~--~~l~~ 70 (181)
++..+..+.|...|.+|++|..-|.|.+|.-... ++...|+.|.. -+..+.|-.++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 3445789999999999999998899999965422 22233443321 12345555443 46778
Q ss_pred eeCCCcEEEEeCCC---------------------------------------------------CCcccEEEEEEcCCC
Q psy10953 71 GALDGIINIFDANT---------------------------------------------------GHSSWVLSTAFTRDG 99 (181)
Q Consensus 71 ~~~d~~v~i~d~~~---------------------------------------------------~~~~~v~~~~~s~~~ 99 (181)
...|.++++|.+.. .|...++++.|..|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 88999999997531 022235677888888
Q ss_pred CEEEEEeCCCcEEEEecCCCc---eeeeee-c-----CCcEEEEEEccCCCE-EEEEcCCCcEEEEeCCC
Q psy10953 100 KFFISASADHTVRVWNFARRE---NMHTFK-H-----ADQVWCVCVAPDGDK-FVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 100 ~~l~~~~~d~~i~v~d~~~~~---~~~~~~-~-----~~~v~~~~~sp~g~~-l~~~~~d~~v~i~~~~~ 159 (181)
+.++++. |=.|.+|++.-.. .+..++ | ...|++..|+|.... +.-.+.-|.|++-|+++
T Consensus 185 et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq 253 (460)
T COG5170 185 ETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQ 253 (460)
T ss_pred heeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhh
Confidence 8887655 6689999986422 112222 2 235788999997554 44455678999988863
No 342
>KOG4640|consensus
Probab=97.49 E-value=0.00081 Score=54.75 Aligned_cols=75 Identities=9% Similarity=0.186 Sum_probs=63.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEE-EEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVW-CVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~-~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
.+.-+-|+|.-.++|.+..+|.+.+..+. .+.+.+++ +...+. ++||.|||+.++.|-.||+|++-|..++..+.
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 35567899999999999999999998887 66778887 555566 99999999999999999999999998876554
No 343
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.49 E-value=0.035 Score=44.34 Aligned_cols=66 Identities=17% Similarity=0.221 Sum_probs=47.9
Q ss_pred EEEEcCCCCEEEEEeCC----------C-cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 16 NVVFSPDDKYVLSGSQS----------G-KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d----------~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
.++.+|.|..+|..-++ . .|++|+.. |+++..+......+.++.|+.+. .|+....||.+++||..
T Consensus 33 ~va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 33 IVAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred eEEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCC
Confidence 56788888888877554 1 48888765 55555555544667799998854 46677889999999983
No 344
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.46 E-value=0.023 Score=46.39 Aligned_cols=146 Identities=16% Similarity=0.272 Sum_probs=90.9
Q ss_pred EEEcCCCCEEEEEeCCC------------------cEEEEeCCCCcEEEEEecCCceEE------EEEEC----CCCC--
Q psy10953 17 VVFSPDDKYVLSGSQSG------------------KINLYGVETGKLEQIFDTRGKFTL------SIAYS----TDGH-- 66 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~------------------~i~~~d~~~~~~~~~~~~~~~~~~------~~~~s----~d~~-- 66 (181)
.++.+.+.+++.++.++ .+.-+|.++|+..-.++....... ...+. -+|.
T Consensus 222 pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~ 301 (488)
T cd00216 222 PTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPV 301 (488)
T ss_pred eeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCee
Confidence 34455566777776554 799999999998765543211000 01111 2343
Q ss_pred -EEEEeeCCCcEEEEeCCCCCcccEEE-----EEEcCCCCEEEEE-----------------eCCCcEEEEecCCCceee
Q psy10953 67 -WIASGALDGIINIFDANTGHSSWVLS-----TAFTRDGKFFISA-----------------SADHTVRVWNFARRENMH 123 (181)
Q Consensus 67 -~l~~~~~d~~v~i~d~~~~~~~~v~~-----~~~s~~~~~l~~~-----------------~~d~~i~v~d~~~~~~~~ 123 (181)
.++.+..+|.+.-.|+++++..+-.. ++.+| +..++.. ..++.+.-.|..+++.+.
T Consensus 302 ~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W 380 (488)
T cd00216 302 PAIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVW 380 (488)
T ss_pred EEEEEECCCceEEEEECCCCcEeeEeEeeccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEee
Confidence 56778889999999999887554332 33444 3333321 135788889999998887
Q ss_pred eeecC---------CcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 124 TFKHA---------DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 124 ~~~~~---------~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
+.... .+...-.....+..++.++.|+.++.++..+|+++
T Consensus 381 ~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~l 429 (488)
T cd00216 381 EKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKEL 429 (488)
T ss_pred EeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCcee
Confidence 76533 11111111125678888899999999999888765
No 345
>KOG3617|consensus
Probab=97.46 E-value=0.00028 Score=59.41 Aligned_cols=101 Identities=16% Similarity=0.345 Sum_probs=77.7
Q ss_pred EEEEEcCCCCEEEEEeC----CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC------
Q psy10953 15 WNVVFSPDDKYVLSGSQ----SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT------ 84 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~------ 84 (181)
.-.+|+|..-+++.++. .|.+.+| .++|....... ....+.+++|+|..-.|+.|=..|.+.+|...+
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv 96 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTV 96 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeee
Confidence 44679999999988775 3678887 45565433222 122234799999888888888889999998753
Q ss_pred --CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy10953 85 --GHSSWVLSTAFTRDGKFFISASADHTVRVWNFA 117 (181)
Q Consensus 85 --~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 117 (181)
.|...+..+.|||+|..++++..-|.+.+|...
T Consensus 97 ~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 97 VETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 366778999999999999999999999999765
No 346
>KOG0882|consensus
Probab=97.46 E-value=0.00038 Score=54.63 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=95.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCC---CcEEEEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCCCCcc---------
Q psy10953 22 DDKYVLSGSQSGKINLYGVET---GKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANTGHSS--------- 88 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~~~~~--------- 88 (181)
.-+++.+++.||.+++|--.. -+++..+..|-..+.+++.+-||.++.+.+. |..++++|+......
T Consensus 19 ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lP 98 (558)
T KOG0882|consen 19 KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLP 98 (558)
T ss_pred hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCC
Confidence 556888999999999996432 1233334445555667888889999999777 999999998643211
Q ss_pred cEEEEEEcCCC--CEEEE-EeCCCcEEEEecCCCceeee-e--ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 89 WVLSTAFTRDG--KFFIS-ASADHTVRVWNFARRENMHT-F--KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 89 ~v~~~~~s~~~--~~l~~-~~~d~~i~v~d~~~~~~~~~-~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.-.....+|.. .+++. .-.++.+.++|-+...+... + .|..+|..+.+.|.+..+++....|.|..|....
T Consensus 99 g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~ 175 (558)
T KOG0882|consen 99 GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG 175 (558)
T ss_pred CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC
Confidence 11111222321 13333 33578999999876543322 2 3788999999999999999999899999999863
No 347
>KOG0309|consensus
Probab=97.45 E-value=0.0012 Score=54.97 Aligned_cols=146 Identities=12% Similarity=0.223 Sum_probs=94.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEec-CCceEEEEEECCCC---CEEEEeeCCCcEEEEeCC-----
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDT-RGKFTLSIAYSTDG---HWIASGALDGIINIFDAN----- 83 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~s~d~---~~l~~~~~d~~v~i~d~~----- 83 (181)
+..++++|.|+-++.++.-| +.+.|+. .+..-..+.+ ....+-...|+|.. .++++.+ .....+|++.
T Consensus 27 ~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts-~qkaiiwnlA~ss~~ 104 (1081)
T KOG0309|consen 27 FNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTS-NQKAIIWNLAKSSSN 104 (1081)
T ss_pred ccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecC-cchhhhhhhhcCCcc
Confidence 35678899999998887554 3445554 2332233322 23344456776643 3455444 3345567664
Q ss_pred ------CCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCce-eeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 84 ------TGHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARREN-MHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 84 ------~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~-~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
-+|...|+.+.|.|+. ..+++++.|-.+..||+++... +..+. ....-..+.++-..-.+.+.+..+.|++
T Consensus 105 aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~v 184 (1081)
T KOG0309|consen 105 AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFV 184 (1081)
T ss_pred ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEE
Confidence 2677889999999976 4899999999999999998653 33332 2334455677654445555677789999
Q ss_pred EeCCCCe
Q psy10953 155 YSYKPEE 161 (181)
Q Consensus 155 ~~~~~~~ 161 (181)
|+...|.
T Consensus 185 wd~r~gs 191 (1081)
T KOG0309|consen 185 WDLRKGS 191 (1081)
T ss_pred EeccCCC
Confidence 9987663
No 348
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.45 E-value=0.024 Score=42.57 Aligned_cols=147 Identities=18% Similarity=0.261 Sum_probs=89.0
Q ss_pred EEEcCCCCEEEEEeCC-----CcEEEEeCCCC-cEEEEEecCCceEEEEEECCCCCEEEEeeC------C----------
Q psy10953 17 VVFSPDDKYVLSGSQS-----GKINLYGVETG-KLEQIFDTRGKFTLSIAYSTDGHWIASGAL------D---------- 74 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d-----~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~------d---------- 74 (181)
=.|||||.+|.+.-+| |.|-+||.+.+ +.+..+..++--.-.+.+.+||+.++.+.. |
T Consensus 119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNlds 198 (366)
T COG3490 119 GVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDS 198 (366)
T ss_pred cccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhh
Confidence 3589999999876554 57999998733 333455555544457899999999887543 1
Q ss_pred --CcEEEEeCCCC------------CcccEEEEEEcCCCCEEEEEeCCCc-----EEEEecCCCceeeeee--------c
Q psy10953 75 --GIINIFDANTG------------HSSWVLSTAFTRDGKFFISASADHT-----VRVWNFARRENMHTFK--------H 127 (181)
Q Consensus 75 --~~v~i~d~~~~------------~~~~v~~~~~s~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~--------~ 127 (181)
-++.+.|..++ +...|..++..+||..++-+-..|. -.+=-...++++.-+. .
T Consensus 199 MePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~ 278 (366)
T COG3490 199 MEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAF 278 (366)
T ss_pred cCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHH
Confidence 12334443222 2345788888888887655544331 1111112223332222 1
Q ss_pred CCcEEEEEEccCCCEEEEEcC-CCcEEEEeCCCCeeE
Q psy10953 128 ADQVWCVCVAPDGDKFVSVGE-DKAVHMYSYKPEEEV 163 (181)
Q Consensus 128 ~~~v~~~~~sp~g~~l~~~~~-d~~v~i~~~~~~~~~ 163 (181)
...|-+++.+.+...++..+. .+...+||..+|..+
T Consensus 279 anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv 315 (366)
T COG3490 279 ANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVV 315 (366)
T ss_pred HhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEE
Confidence 234667888877777777775 457789999887544
No 349
>KOG1920|consensus
Probab=97.45 E-value=0.019 Score=50.38 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=96.5
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--------
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN-------- 83 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~-------- 83 (181)
..+-++.|..+++.+..+..+|.|.+-|..+....-.-...+. +.+++||||+++++......++.+-+-.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~G-I~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNG-ISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCc-eEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 4577888888888888888999999998877765443333344 5689999999999988887777665420
Q ss_pred --------C-----C--------C--------------c---------ccEEEEEEcCCCCEEEEEe----CC-CcEEEE
Q psy10953 84 --------T-----G--------H--------------S---------SWVLSTAFTRDGKFFISAS----AD-HTVRVW 114 (181)
Q Consensus 84 --------~-----~--------~--------------~---------~~v~~~~~s~~~~~l~~~~----~d-~~i~v~ 114 (181)
. | + . ..=..+.|--||+++++.. .+ .++++|
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~ 227 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY 227 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence 0 0 0 0 0012377888999888733 23 789999
Q ss_pred ecCCCceeeee-ecCCcEEEEEEccCCCEEEEEcC---CCcEEEEeC
Q psy10953 115 NFARRENMHTF-KHADQVWCVCVAPDGDKFVSVGE---DKAVHMYSY 157 (181)
Q Consensus 115 d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~---d~~v~i~~~ 157 (181)
|-. +..-..- +..+--.+++|-|.|..+++... |+.|.+|.-
T Consensus 228 drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr 273 (1265)
T KOG1920|consen 228 DRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER 273 (1265)
T ss_pred ccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence 976 3222111 12233457899999999988653 456777764
No 350
>KOG2114|consensus
Probab=97.44 E-value=0.012 Score=49.77 Aligned_cols=138 Identities=16% Similarity=0.273 Sum_probs=89.1
Q ss_pred CCEEEEEeCCC-----cEEEEeCCCC------cEE---EEEe----cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC-
Q psy10953 23 DKYVLSGSQSG-----KINLYGVETG------KLE---QIFD----TRGKFTLSIAYSTDGHWIASGALDGIINIFDAN- 83 (181)
Q Consensus 23 g~~l~~~~~d~-----~i~~~d~~~~------~~~---~~~~----~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~- 83 (181)
..+|++-+.|+ .+++|+++.. ++. ..+. ....+..+++.+.+-+.+|.|-.||.|..+.-.
T Consensus 77 ~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi 156 (933)
T KOG2114|consen 77 QNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDI 156 (933)
T ss_pred ceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcc
Confidence 35677665554 5999998532 222 2222 123345578888888999999999999998532
Q ss_pred -----------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-ee-cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 84 -----------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT-FK-HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 84 -----------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~-~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
.....+|+++++..+++.++.+.....|.+|.+....+... .. +.....|..+++....|++++ +.
T Consensus 157 ~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e 235 (933)
T KOG2114|consen 157 LRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SE 235 (933)
T ss_pred hhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-Cc
Confidence 11245799999999998634444456899999885542222 33 455688888887665455554 34
Q ss_pred cEEEEeCCCCe
Q psy10953 151 AVHMYSYKPEE 161 (181)
Q Consensus 151 ~v~i~~~~~~~ 161 (181)
.+..|+.+..+
T Consensus 236 ~l~fY~sd~~~ 246 (933)
T KOG2114|consen 236 FLYFYDSDGRG 246 (933)
T ss_pred eEEEEcCCCcc
Confidence 67777765433
No 351
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.42 E-value=0.029 Score=41.96 Aligned_cols=142 Identities=12% Similarity=0.187 Sum_probs=89.7
Q ss_pred cCCCCEEEEEeCCCcEEEEeC-CCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC---C---------
Q psy10953 20 SPDDKYVLSGSQSGKINLYGV-ETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---H--------- 86 (181)
Q Consensus 20 s~~g~~l~~~~~d~~i~~~d~-~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---~--------- 86 (181)
...++.|+.|..+| +.+++. ...+....... ..+..+..-++-+.|+.-+ |+.++++++..- .
T Consensus 4 ~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~--~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 4 DSWGDRLLVGTEDG-LYVYDLSDPSKPTRILKL--SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred ccCCCEEEEEECCC-EEEEEecCCccceeEeec--ceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccc
Confidence 35788899999998 899988 33343333322 2267788888777666554 599999997521 0
Q ss_pred ----------cccEEEEE--EcCCCCEEEEEeCCCcEEEEecCCC-----ceeeeeecCCcEEEEEEccCCCEEEEEcCC
Q psy10953 87 ----------SSWVLSTA--FTRDGKFFISASADHTVRVWNFARR-----ENMHTFKHADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 87 ----------~~~v~~~~--~s~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
...+...+ -.+.+...++.....+|.+|..... .....+..++.+.+++|. ++.++.+. .
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~-~ 156 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGT-S 156 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEe-C
Confidence 01122222 1123444444555568888877552 455666777889999998 55566665 4
Q ss_pred CcEEEEeCCCCeeEEEcCC
Q psy10953 150 KAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 150 ~~v~i~~~~~~~~~~~~~~ 168 (181)
+...+.|+.++....+...
T Consensus 157 ~~f~~idl~~~~~~~l~~~ 175 (275)
T PF00780_consen 157 KGFYLIDLNTGSPSELLDP 175 (275)
T ss_pred CceEEEecCCCCceEEeCc
Confidence 5688889987766665543
No 352
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.38 E-value=0.04 Score=42.51 Aligned_cols=145 Identities=14% Similarity=0.155 Sum_probs=88.9
Q ss_pred CEEEEEeCCCcEEEEeCC-CCcEEEEE----ecCCceE-EEEEECCCCCEEEEeeCCCcEEEEeCCCCCc----------
Q psy10953 24 KYVLSGSQSGKINLYGVE-TGKLEQIF----DTRGKFT-LSIAYSTDGHWIASGALDGIINIFDANTGHS---------- 87 (181)
Q Consensus 24 ~~l~~~~~d~~i~~~d~~-~~~~~~~~----~~~~~~~-~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~---------- 87 (181)
+.+.+-|.||.+.-..+. .|+..+.. ......+ ..-.++..+..++..+.+|.|+-.|+.....
T Consensus 148 ~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t 227 (342)
T PF06433_consen 148 RGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLT 227 (342)
T ss_dssp TEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-
T ss_pred CceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccC
Confidence 457788889999988886 66654321 1112211 1233444555666678888888777643210
Q ss_pred ------cc----EEEEEEcCCCCEEEEEeC---CC-------cEEEEecCCCceeeeeecCCcEEEEEEccCCC-EEEEE
Q psy10953 88 ------SW----VLSTAFTRDGKFFISASA---DH-------TVRVWNFARRENMHTFKHADQVWCVCVAPDGD-KFVSV 146 (181)
Q Consensus 88 ------~~----v~~~~~s~~~~~l~~~~~---d~-------~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~ 146 (181)
.| -.-+++++..+.|..... ++ .|=+||+.+++.+..++...++.++.++.+.+ +|++.
T Consensus 228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~ 307 (342)
T PF06433_consen 228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYAL 307 (342)
T ss_dssp HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEE
T ss_pred ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEE
Confidence 11 123566665443332221 11 47777999999998888767788999999877 55554
Q ss_pred -cCCCcEEEEeCCCCeeEEEcCC
Q psy10953 147 -GEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 147 -~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
..++.+.+||..++..++...+
T Consensus 308 ~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 308 SAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp ETTTTEEEEEETTT--EEEEE--
T ss_pred cCCCCeEEEEeCcCCcEEeehhc
Confidence 4578999999999998876654
No 353
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.37 E-value=0.027 Score=43.24 Aligned_cols=136 Identities=15% Similarity=0.252 Sum_probs=81.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-EEEEEecCC-ceEEEEEECCCCCEEEEeeCCCcEEEE--eCCC-----
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGK-LEQIFDTRG-KFTLSIAYSTDGHWIASGALDGIINIF--DANT----- 84 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~~v~i~--d~~~----- 84 (181)
+.+++-- +|+ |+++. .++|.+|++...+ +...-..+. ..+.++.. .+.+++.|+....+.++ +...
T Consensus 91 V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~ 165 (321)
T PF03178_consen 91 VTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENNKLIL 165 (321)
T ss_dssp EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-EEE
T ss_pred ceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCCEEEE
Confidence 4555443 444 54444 4799999998887 665444332 23334433 46688899888888876 4321
Q ss_pred ----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-------Cc----eeeeeecCCcEEEE---EEccC--CC---
Q psy10953 85 ----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFAR-------RE----NMHTFKHADQVWCV---CVAPD--GD--- 141 (181)
Q Consensus 85 ----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-------~~----~~~~~~~~~~v~~~---~~sp~--g~--- 141 (181)
....++.++.|-++++.++.+..+|++.++.... +. ....+...+.|+++ ++.|. +.
T Consensus 166 va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~ 245 (321)
T PF03178_consen 166 VARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESP 245 (321)
T ss_dssp EEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TT
T ss_pred EEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCccc
Confidence 1245678888887778999999999999997652 11 23344556677777 55552 22
Q ss_pred ---EEEEEcCCCcEEE
Q psy10953 142 ---KFVSVGEDKAVHM 154 (181)
Q Consensus 142 ---~l~~~~~d~~v~i 154 (181)
.++.++.+|.|..
T Consensus 246 ~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 246 NRPQILYGTVDGSIGV 261 (321)
T ss_dssp EEEEEEEEETTS-EEE
T ss_pred ccceEEEEecCCEEEE
Confidence 3677778888773
No 354
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.34 E-value=0.018 Score=47.17 Aligned_cols=136 Identities=10% Similarity=0.167 Sum_probs=84.7
Q ss_pred EEEEEEcCCCCEEE-EEe--CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC----CEEEEeeCCCcEEEEeCCCC-
Q psy10953 14 MWNVVFSPDDKYVL-SGS--QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG----HWIASGALDGIINIFDANTG- 85 (181)
Q Consensus 14 ~~~~~~s~~g~~l~-~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~----~~l~~~~~d~~v~i~d~~~~- 85 (181)
+..++|. ||+.++ +.- ..|++++=|. +.+..|. .+.+++|+|-+ -.|.+...-+.|.+|-+...
T Consensus 22 vhGlaWT-DGkqVvLT~L~l~~gE~kfGds---~viGqFE----hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~ 93 (671)
T PF15390_consen 22 VHGLAWT-DGKQVVLTDLQLHNGEPKFGDS---KVIGQFE----HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPST 93 (671)
T ss_pred ccceEec-CCCEEEEEeeeeeCCccccCCc---cEeeccc----eeeeeeecCcccCCCCceEEEeccceEEEEEeccCc
Confidence 3688887 666554 432 3555554443 3344443 25688998853 34666667789999987511
Q ss_pred -Cc--------------c--cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce--eeeeecCCcEEEEEEccCCCEEEEE
Q psy10953 86 -HS--------------S--WVLSTAFTRDGKFFISASADHTVRVWNFARREN--MHTFKHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 86 -~~--------------~--~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~v~~~~~sp~g~~l~~~ 146 (181)
+. - -...+.|+|....|+.-.....-.+++...... -..+...+.|.|.||.+||++++++
T Consensus 94 ~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVA 173 (671)
T PF15390_consen 94 TERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVA 173 (671)
T ss_pred cccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEE
Confidence 10 0 123567999888777777655555666554332 2334567889999999999997665
Q ss_pred cC-CCcEEEEeC
Q psy10953 147 GE-DKAVHMYSY 157 (181)
Q Consensus 147 ~~-d~~v~i~~~ 157 (181)
-. .-.-++||-
T Consensus 174 vGSsLHSyiWd~ 185 (671)
T PF15390_consen 174 VGSSLHSYIWDS 185 (671)
T ss_pred eCCeEEEEEecC
Confidence 43 335678884
No 355
>KOG4649|consensus
Probab=97.27 E-value=0.043 Score=40.72 Aligned_cols=64 Identities=25% Similarity=0.281 Sum_probs=52.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG 85 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~ 85 (181)
-|.+++.|+..+.+++.+..+|.+...+...+..-......+++..+..|+.|+..+..|.++.
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~ 125 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTY 125 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEeccccc
Confidence 3667889999999999999999887777665554345667889999999999999999998754
No 356
>KOG1912|consensus
Probab=97.25 E-value=0.00079 Score=56.24 Aligned_cols=94 Identities=15% Similarity=0.316 Sum_probs=73.9
Q ss_pred EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEeCCCC---------
Q psy10953 25 YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFDANTG--------- 85 (181)
Q Consensus 25 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d~~~~--------- 85 (181)
++|.|...|+|-++|+.++.+...+..|...+.++.|-.... |++.+ .-+.+.+-|+++|
T Consensus 439 LvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~ss-lvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~ 517 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSS-LVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQ 517 (1062)
T ss_pred eEEeecCCceEEEEEecchhhhhhhcccccceeeeeecccee-EEEeeeccccccccceeeeEEEEEcccccccccccCC
Confidence 467899999999999999999888888888888888865544 33322 2345667777654
Q ss_pred --CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy10953 86 --HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR 119 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 119 (181)
...+|..+..|.-|++++..-.+.-+.+||+++.
T Consensus 518 ~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~ 553 (1062)
T KOG1912|consen 518 KPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTL 553 (1062)
T ss_pred CCCcCcceeeeecccCceEEEEecccchHHHhhccc
Confidence 3457889999999999999999999999998653
No 357
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.24 E-value=0.015 Score=44.68 Aligned_cols=124 Identities=19% Similarity=0.274 Sum_probs=84.3
Q ss_pred CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEeCCCC-----------Cc----
Q psy10953 33 GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFDANTG-----------HS---- 87 (181)
Q Consensus 33 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d~~~~-----------~~---- 87 (181)
+++.++|.++++++..+... ..-.+..|||++.++++. ..-.|.+||..+- +.
T Consensus 17 ~rv~viD~d~~k~lGmi~~g--~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTG--FLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEE--SSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeecc--cCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 47999999999988776542 222466899999887643 3457889998641 11
Q ss_pred ccEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 88 SWVLSTAFTRDGKFFISAS--ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 88 ~~v~~~~~s~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
......+++.+|++++... .-..|.|.|+..++.+..+.-+++..-.-..+ +.|.+-|.||.+.-..+...
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~--~~F~~lC~DGsl~~v~Ld~~ 167 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGN--RGFSMLCGDGSLLTVTLDAD 167 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEET--TEEEEEETTSCEEEEEETST
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCC--CceEEEecCCceEEEEECCC
Confidence 1123467889998765544 45679999999998888888777654332222 45778888999999888743
No 358
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.19 E-value=0.017 Score=45.25 Aligned_cols=143 Identities=16% Similarity=0.183 Sum_probs=76.1
Q ss_pred EEEcCCCCEEEEEe-CCC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccE---
Q psy10953 17 VVFSPDDKYVLSGS-QSG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWV--- 90 (181)
Q Consensus 17 ~~~s~~g~~l~~~~-~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v--- 90 (181)
=+|.+||+.|+.++ .|+ .+...|+.+++..++....+.......++++.+.++.......+.-.|+.+.+...|
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 35788998776544 455 466778999999888765443333566789888888777677888889887654322
Q ss_pred -----EEEEE--cCCCCEEEEEeCC----------------------CcEEEEecCCCceeeeeecCCcEEEEEEccCCC
Q psy10953 91 -----LSTAF--TRDGKFFISASAD----------------------HTVRVWNFARRENMHTFKHADQVWCVCVAPDGD 141 (181)
Q Consensus 91 -----~~~~~--s~~~~~l~~~~~d----------------------~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~ 141 (181)
....| +.++..++-.... ..|.-.|+.+++....+.....+..+-|||..-
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp 200 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDP 200 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCC
Confidence 22233 3445554332211 134444566666554555556677888998766
Q ss_pred EEEEEcCCC---c--EEEEeCCC
Q psy10953 142 KFVSVGEDK---A--VHMYSYKP 159 (181)
Q Consensus 142 ~l~~~~~d~---~--v~i~~~~~ 159 (181)
.++.-+.+| . -+||-+.+
T Consensus 201 ~li~fCHEGpw~~Vd~RiW~i~~ 223 (386)
T PF14583_consen 201 TLIMFCHEGPWDLVDQRIWTINT 223 (386)
T ss_dssp EEEEEEE-S-TTTSS-SEEEEET
T ss_pred CEEEEeccCCcceeceEEEEEEc
Confidence 666555433 2 36777654
No 359
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.16 E-value=0.067 Score=43.72 Aligned_cols=140 Identities=14% Similarity=0.293 Sum_probs=84.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCcEEEEEecCCce--EEEEEECC--CCCEEEEee---------CCCcEEEEeCCCCCcccE
Q psy10953 24 KYVLSGSQSGKINLYGVETGKLEQIFDTRGKF--TLSIAYST--DGHWIASGA---------LDGIINIFDANTGHSSWV 90 (181)
Q Consensus 24 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~s~--d~~~l~~~~---------~d~~v~i~d~~~~~~~~v 90 (181)
..++.++.++.|..+|.++|+.+-.+...... -..+.-+| .+..++.++ .++.+.-+|+.+++..+.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 67778888999999999999988665543321 00111111 123444443 356788888876653332
Q ss_pred E-----------------------------EEEEcCCCCEEEEEeCCC------------------cEEEEecCCCceee
Q psy10953 91 L-----------------------------STAFTRDGKFFISASADH------------------TVRVWNFARRENMH 123 (181)
Q Consensus 91 ~-----------------------------~~~~s~~~~~l~~~~~d~------------------~i~v~d~~~~~~~~ 123 (181)
. ..++++.+..++.++.++ .+.-+|..+++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W 270 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW 270 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence 1 123344455566666554 68889999998887
Q ss_pred eeecC-CcEEE------EEEc----cCCC---EEEEEcCCCcEEEEeCCCCeeE
Q psy10953 124 TFKHA-DQVWC------VCVA----PDGD---KFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 124 ~~~~~-~~v~~------~~~s----p~g~---~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
.++.. ...+. ..+. -+|. .+++++.++.++..|..+|+++
T Consensus 271 ~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~ 324 (488)
T cd00216 271 FYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLI 324 (488)
T ss_pred EeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEe
Confidence 76521 11111 1111 1343 5777888899999999888765
No 360
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.16 E-value=0.0025 Score=34.41 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=30.6
Q ss_pred cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 127 HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
....|.+++|+|....+|.+..+|.|.+|++ .+++
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 4567999999999999999999999999999 5544
No 361
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.14 E-value=0.0011 Score=51.67 Aligned_cols=87 Identities=26% Similarity=0.379 Sum_probs=58.4
Q ss_pred cCCCCEEEEEe---------CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC----
Q psy10953 20 SPDDKYVLSGS---------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH---- 86 (181)
Q Consensus 20 s~~g~~l~~~~---------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~---- 86 (181)
|||+++++... ..+.+.++|+.+++...+... ........|||+|+.++... ++.+++++...+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 68999887643 245789999999887766544 23344789999999998776 5678888764321
Q ss_pred ---------------------cccEEEEEEcCCCCEEEEEeCC
Q psy10953 87 ---------------------SSWVLSTAFTRDGKFFISASAD 108 (181)
Q Consensus 87 ---------------------~~~v~~~~~s~~~~~l~~~~~d 108 (181)
-..-.++.|||||++|+....|
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d 121 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD 121 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence 0112457899999988866543
No 362
>KOG2444|consensus
Probab=97.11 E-value=0.0029 Score=45.63 Aligned_cols=129 Identities=17% Similarity=0.163 Sum_probs=77.4
Q ss_pred EEeCCCcEEEEeCCCCcEEEEEecCCceEEE-EEECCCCCEEEEeeCCCcEEEEeCCC--CC--------cccEEEEEEc
Q psy10953 28 SGSQSGKINLYGVETGKLEQIFDTRGKFTLS-IAYSTDGHWIASGALDGIINIFDANT--GH--------SSWVLSTAFT 96 (181)
Q Consensus 28 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~s~d~~~l~~~~~d~~v~i~d~~~--~~--------~~~v~~~~~s 96 (181)
..+.|+.++-++++..+..-.- ..++.+ ...-.-+..++.|+.+|.|++|.... .| ......+.-.
T Consensus 35 ~~sa~~~v~~~~~~k~k~s~rs---e~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~ 111 (238)
T KOG2444|consen 35 ATSADGLVRERKVRKHKESCRS---ERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNG 111 (238)
T ss_pred cccCCcccccchhhhhhhhhhh---hhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccccc
Confidence 4456777776666544332110 011111 11122346688899999999998752 12 1112223233
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCceeeeee-cC-CcEEEEEEccCCCEEEEE--cCCCcEEEEeCCC
Q psy10953 97 RDGKFFISASADHTVRVWNFARRENMHTFK-HA-DQVWCVCVAPDGDKFVSV--GEDKAVHMYSYKP 159 (181)
Q Consensus 97 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~-~~v~~~~~sp~g~~l~~~--~~d~~v~i~~~~~ 159 (181)
.++.+..+++.++.|+-|+....+.+.... |. ..+..+..+-.+++++.. |.|..++.|++..
T Consensus 112 ~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 112 RDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 345577788899999999998877665543 44 345555556667777777 7788888888754
No 363
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.10 E-value=0.068 Score=39.68 Aligned_cols=141 Identities=13% Similarity=0.230 Sum_probs=79.4
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--c--E--EEEEe--c---CCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETG--K--L--EQIFD--T---RGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~--~--~--~~~~~--~---~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+.=.|++-.++.++++.-.++.+.++++... . . .+.+. . .+.-...++|++.++.|+.+....-..+|.
T Consensus 66 D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~ 145 (248)
T PF06977_consen 66 DYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYE 145 (248)
T ss_dssp SEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEE
T ss_pred CceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEE
Confidence 3446677767777776666888988887322 1 1 11222 1 123357899999988888887766656665
Q ss_pred CCC--C-----------------CcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeeecC----------CcE
Q psy10953 82 ANT--G-----------------HSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTFKHA----------DQV 131 (181)
Q Consensus 82 ~~~--~-----------------~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~----------~~v 131 (181)
+.. . ....+.+++++|. +++++-+..+..+..+| ..++....+... ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~Qp 224 (248)
T PF06977_consen 146 VNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQP 224 (248)
T ss_dssp EESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SE
T ss_pred EccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCc
Confidence 432 1 1223567889986 45666677788898998 555555544321 247
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 132 WCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
-+++|.++|+.+++ ++-+..+++
T Consensus 225 EGIa~d~~G~LYIv-sEpNlfy~f 247 (248)
T PF06977_consen 225 EGIAFDPDGNLYIV-SEPNLFYRF 247 (248)
T ss_dssp EEEEE-TT--EEEE-ETTTEEEEE
T ss_pred cEEEECCCCCEEEE-cCCceEEEe
Confidence 79999999966664 455555554
No 364
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.05 E-value=0.014 Score=48.66 Aligned_cols=97 Identities=10% Similarity=-0.014 Sum_probs=58.9
Q ss_pred eEEEEEECCCCCEEEEee------CCC--cEEEEeCCCCCc-----ccEEEEEEcCCCCEEEEEeCC------------C
Q psy10953 55 FTLSIAYSTDGHWIASGA------LDG--IINIFDANTGHS-----SWVLSTAFTRDGKFFISASAD------------H 109 (181)
Q Consensus 55 ~~~~~~~s~d~~~l~~~~------~d~--~v~i~d~~~~~~-----~~v~~~~~s~~~~~l~~~~~d------------~ 109 (181)
.+...+++|||+.++... .|. .+.+++....+. .......|+|+|+.+.+.... +
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g 430 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATG 430 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCCc
Confidence 345788999999887654 243 444445422111 124567899998877766533 2
Q ss_pred cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 110 TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 110 ~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.+++.++..+.... .....|..+++||||.+++... ++.|++
T Consensus 431 ql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 431 QLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred eEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 23222333222211 2245699999999999988766 467766
No 365
>KOG4649|consensus
Probab=97.04 E-value=0.077 Score=39.43 Aligned_cols=117 Identities=20% Similarity=0.206 Sum_probs=80.7
Q ss_pred cCCC-CEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccE--------
Q psy10953 20 SPDD-KYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWV-------- 90 (181)
Q Consensus 20 s~~g-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v-------- 90 (181)
-+|. .+++.|+..+.+.-.|.++|+++-.... +..+.+-+.- -|..++.|...|.+++.+.+++...+-
T Consensus 19 ~~dskT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk 96 (354)
T KOG4649|consen 19 CNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK 96 (354)
T ss_pred ecCCceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc
Confidence 3443 4567888999999999999987643222 2222221111 467788999999999999988754321
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCc-EEEEEEcc
Q psy10953 91 LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQ-VWCVCVAP 138 (181)
Q Consensus 91 ~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-v~~~~~sp 138 (181)
...+..+++.++-+++.|++.+..|.++...+...+-.+. ..+-++.|
T Consensus 97 ~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~ 145 (354)
T KOG4649|consen 97 VRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAP 145 (354)
T ss_pred cceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecC
Confidence 1346788999999999999999999999887766553332 22344555
No 366
>KOG2395|consensus
Probab=97.03 E-value=0.022 Score=46.03 Aligned_cols=128 Identities=15% Similarity=0.207 Sum_probs=82.8
Q ss_pred EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC--E-----EEEeeCCCcEEEEeCCCCCcc---------c-
Q psy10953 27 LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH--W-----IASGALDGIINIFDANTGHSS---------W- 89 (181)
Q Consensus 27 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~--~-----l~~~~~d~~v~i~d~~~~~~~---------~- 89 (181)
.++..-..++=.|++.|+++..+..+.. +.-+.+.|+.+ . -+.|-.|+.|.-||.+..-.. +
T Consensus 350 ~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~ 428 (644)
T KOG2395|consen 350 MDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYS 428 (644)
T ss_pred eCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccc
Confidence 3555556788889999999988777666 33456666543 1 245677889999998732211 0
Q ss_pred ----EEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 90 ----VLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 90 ----v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
-.+.+-..+ -+++.|+.+|.|++||--....-..++ ...+|..+..+.+|+.|++.+ +..+.+.+.
T Consensus 429 ~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 429 TKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred cccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 112222222 367889999999999863222112233 556899999999999998766 455655554
No 367
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.00 E-value=0.043 Score=44.20 Aligned_cols=55 Identities=29% Similarity=0.328 Sum_probs=27.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
|.+|...+.+ .|.+||..+++.+..+.... +..+.|+++|.+++..+.+ .+++++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~--vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVSA--VKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS-E---EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecCC--CcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 5555555433 67777777777666665332 3456677777766655544 445544
No 368
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.94 E-value=0.1 Score=40.02 Aligned_cols=136 Identities=18% Similarity=0.292 Sum_probs=77.0
Q ss_pred EcCCCCE-EEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC------------CC
Q psy10953 19 FSPDDKY-VLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN------------TG 85 (181)
Q Consensus 19 ~s~~g~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~------------~~ 85 (181)
|.++.+. +++--..+.|.-|+..+++... +...+...........+.++++... +.+++.. .+
T Consensus 32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~-~~~p~~~~~~~~~d~~g~Lv~~~~g---~~~~~~~~~~~~t~~~~~~~~ 107 (307)
T COG3386 32 WDPDRGALLWVDILGGRIHRLDPETGKKRV-FPSPGGFSSGALIDAGGRLIACEHG---VRLLDPDTGGKITLLAEPEDG 107 (307)
T ss_pred CcCCCCEEEEEeCCCCeEEEecCCcCceEE-EECCCCcccceeecCCCeEEEEccc---cEEEeccCCceeEEeccccCC
Confidence 5666664 4455566778888877665433 3333333333455555554433221 2223322 11
Q ss_pred -CcccEEEEEEcCCCCEEEEEeC-----------CCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcC-CCc
Q psy10953 86 -HSSWVLSTAFTRDGKFFISASA-----------DHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGE-DKA 151 (181)
Q Consensus 86 -~~~~v~~~~~s~~~~~l~~~~~-----------d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~-d~~ 151 (181)
.....+.....|+|.+.++-.. -|.++.+|. .+....... +-...+++|||||++.++.+-. .+.
T Consensus 108 ~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~ 186 (307)
T COG3386 108 LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR 186 (307)
T ss_pred CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCe
Confidence 1234567788999997765444 134555554 333333332 2345678999999988776665 578
Q ss_pred EEEEeCCC
Q psy10953 152 VHMYSYKP 159 (181)
Q Consensus 152 v~i~~~~~ 159 (181)
|+-|++..
T Consensus 187 i~r~~~d~ 194 (307)
T COG3386 187 IHRYDLDP 194 (307)
T ss_pred EEEEecCc
Confidence 88888763
No 369
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.93 E-value=0.0037 Score=33.77 Aligned_cols=31 Identities=16% Similarity=0.447 Sum_probs=27.9
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVE 41 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~ 41 (181)
+..+..++|+|...++|.+..+|.|.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4457899999999999999999999999983
No 370
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.92 E-value=0.04 Score=46.05 Aligned_cols=108 Identities=13% Similarity=0.181 Sum_probs=70.9
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEE--EECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSI--AYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~--~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+-....-+.-|.-++..++-+.-.++.+||.+.+.+...... ....+..+ ...|||+.+++.+..+.|.+|...
T Consensus 25 ~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~ 104 (631)
T PF12234_consen 25 FETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQL 104 (631)
T ss_pred EecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEcc
Confidence 334444444555566666555555566899999998886643332 23445555 447899999999999999998542
Q ss_pred C-------------------CC-cccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy10953 84 T-------------------GH-SSWVLSTAFTRDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 84 ~-------------------~~-~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 116 (181)
. .+ ...|.+..|.++|.+++.++ ..+.|+|-
T Consensus 105 R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 105 RYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred chhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 1 11 13567788999999876554 56777763
No 371
>KOG4499|consensus
Probab=96.83 E-value=0.11 Score=38.00 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=57.8
Q ss_pred EEEEECCCCCEEEEe-eCCCcEEEEe--CCCCC-----------------cccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy10953 57 LSIAYSTDGHWIASG-ALDGIINIFD--ANTGH-----------------SSWVLSTAFTRDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 57 ~~~~~s~d~~~l~~~-~~d~~v~i~d--~~~~~-----------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 116 (181)
..+.|+.|.+.+..- +.+-.|.-|| ..++. ....-.++++-+|++.+++-..++|..+|+
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp 240 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP 240 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence 367888888877765 4455665566 32221 111223455667888888999999999999
Q ss_pred CCCceeeeee-cCCcEEEEEEc
Q psy10953 117 ARRENMHTFK-HADQVWCVCVA 137 (181)
Q Consensus 117 ~~~~~~~~~~-~~~~v~~~~~s 137 (181)
.+++.+.++. ....++++||-
T Consensus 241 ~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 241 TTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred CCCcEEEEEEcCCCceEEEEec
Confidence 9999999887 45679999995
No 372
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.76 E-value=0.067 Score=34.40 Aligned_cols=91 Identities=22% Similarity=0.239 Sum_probs=60.3
Q ss_pred EECCCC-CEEEEeeCCCcEEEEeCCC-----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEE
Q psy10953 60 AYSTDG-HWIASGALDGIINIFDANT-----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWC 133 (181)
Q Consensus 60 ~~s~d~-~~l~~~~~d~~v~i~d~~~-----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~ 133 (181)
.|..|| +.|++|+.|..|++|+-.. .+...|..+.-... ..++.+..+|+|-+|+- ...+...+....+.+
T Consensus 9 d~d~dg~~eLlvGs~D~~IRvf~~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~~~~ 85 (111)
T PF14783_consen 9 DFDGDGENELLVGSDDFEIRVFKGDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWRIKSKNQVTS 85 (111)
T ss_pred ecCCCCcceEEEecCCcEEEEEeCCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeeeeccCCCeEE
Confidence 344454 5688999999999998642 34556777765555 55788899999999975 334455554445666
Q ss_pred EEEcc---CCC-EEEEEcCCCcEE
Q psy10953 134 VCVAP---DGD-KFVSVGEDKAVH 153 (181)
Q Consensus 134 ~~~sp---~g~-~l~~~~~d~~v~ 153 (181)
+++.. ||. -|++|=.+|.|-
T Consensus 86 ~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 86 MAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEEEcCCCCCceEEEEEecCCeEE
Confidence 65432 232 477777777764
No 373
>KOG2079|consensus
Probab=96.66 E-value=0.094 Score=45.89 Aligned_cols=67 Identities=13% Similarity=0.352 Sum_probs=52.3
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceE---EEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFT---LSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
.|.+++|+.||+.++.|-.+|.|.+||+..++.++.+..++... ..+.+..++..++++..-|. +|.
T Consensus 132 ~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 132 PVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred cceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEE
Confidence 47899999999999999999999999999999988877655433 33455556666777777775 454
No 374
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.61 E-value=0.18 Score=37.48 Aligned_cols=134 Identities=16% Similarity=0.092 Sum_probs=81.7
Q ss_pred eEEEEEEcCCCCEEEEEe---CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe-CCCC---
Q psy10953 13 DMWNVVFSPDDKYVLSGS---QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD-ANTG--- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d-~~~~--- 85 (181)
.+...++|++|+.++... ....++++.. +....... .+......+|++++...+....+....++. ...+
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 578899999999887655 2334555543 33222221 233445789999987776666565555552 2111
Q ss_pred -------Ccc-cEEEEEEcCCCCEEEEEe---CCCcEEEEecCC---C--cee----eee-ecCCcEEEEEEccCCCEEE
Q psy10953 86 -------HSS-WVLSTAFTRDGKFFISAS---ADHTVRVWNFAR---R--ENM----HTF-KHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 86 -------~~~-~v~~~~~s~~~~~l~~~~---~d~~i~v~d~~~---~--~~~----~~~-~~~~~v~~~~~sp~g~~l~ 144 (181)
... .|..+.+||||..++... .++.+++--+.. + ..+ ... .....+..++|.+++.+++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 112 789999999998766555 346677665432 2 111 111 1235688999999998887
Q ss_pred EEcCC
Q psy10953 145 SVGED 149 (181)
Q Consensus 145 ~~~~d 149 (181)
.+...
T Consensus 182 ~~~~~ 186 (253)
T PF10647_consen 182 LGRSA 186 (253)
T ss_pred EeCCC
Confidence 77654
No 375
>PHA02713 hypothetical protein; Provisional
Probab=96.59 E-value=0.051 Score=45.19 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=72.7
Q ss_pred CCCCEEEEEeCCC-----cEEEEeCCCCcEEEEEecCCce-EEEEEECCCCCEEEEeeCCC-------------------
Q psy10953 21 PDDKYVLSGSQSG-----KINLYGVETGKLEQIFDTRGKF-TLSIAYSTDGHWIASGALDG------------------- 75 (181)
Q Consensus 21 ~~g~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~d~~~l~~~~~d~------------------- 75 (181)
-+|++.+.||.++ ++..||..+++....-...... ..++. .-+|+..+.|+.++
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~-~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC-VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE-EECCEEEEEeCCCcccccccccccccccccccc
Confidence 3677778888654 4778888776544321111111 01111 23577777776542
Q ss_pred ----cEEEEeCCCCC--------cccEEEEEEcCCCCEEEEEeCC------CcEEEEecCC-C--ceeeeeecC-CcEEE
Q psy10953 76 ----IINIFDANTGH--------SSWVLSTAFTRDGKFFISASAD------HTVRVWNFAR-R--ENMHTFKHA-DQVWC 133 (181)
Q Consensus 76 ----~v~i~d~~~~~--------~~~v~~~~~s~~~~~l~~~~~d------~~i~v~d~~~-~--~~~~~~~~~-~~v~~ 133 (181)
.+..||+.+.. ..........-+++..+.|+.+ ..+..||..+ . ..+..++.+ .....
T Consensus 429 ~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~ 508 (557)
T PHA02713 429 HSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHT 508 (557)
T ss_pred cccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccccee
Confidence 46678876431 1111111223356777777654 2367788876 3 233333321 12222
Q ss_pred EEEccCCCEEEEEcCCC--cEEEEeCCCC
Q psy10953 134 VCVAPDGDKFVSVGEDK--AVHMYSYKPE 160 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~--~v~i~~~~~~ 160 (181)
++ -+|+.+++|+.++ .+..||..+.
T Consensus 509 ~~--~~~~iyv~Gg~~~~~~~e~yd~~~~ 535 (557)
T PHA02713 509 IL--HDNTIMMLHCYESYMLQDTFNVYTY 535 (557)
T ss_pred EE--ECCEEEEEeeecceeehhhcCcccc
Confidence 22 2788888888877 6777776554
No 376
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.51 E-value=0.29 Score=38.56 Aligned_cols=144 Identities=18% Similarity=0.266 Sum_probs=67.2
Q ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEE--eCCCCcEEEEEec-CCceEEEEEECCCCCEEEEee-----CCCcEEEE
Q psy10953 14 MWNVVFSPDDKYVLSGSQSG-----KINLY--GVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGA-----LDGIINIF 80 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~-----~i~~~--d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~-----~d~~v~i~ 80 (181)
.-.+-|||..-.++.-|..| .-||| +........+... .+..+--=.|+|||..+..-+ .+..+.-+
T Consensus 190 lgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~ 269 (386)
T PF14583_consen 190 LGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGY 269 (386)
T ss_dssp EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE
T ss_pred ccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEee
Confidence 34577888655555444332 23455 4444443333222 222222347899998776532 24566677
Q ss_pred eCCCCCcc------cEEEEEEcCCCCEEEEEeCC----------------CcEEEEecCCCceeeeeecC----------
Q psy10953 81 DANTGHSS------WVLSTAFTRDGKFFISASAD----------------HTVRVWNFARRENMHTFKHA---------- 128 (181)
Q Consensus 81 d~~~~~~~------~v~~~~~s~~~~~l~~~~~d----------------~~i~v~d~~~~~~~~~~~~~---------- 128 (181)
|+.++... +.....-+++|++++-=+.| -.|+++++..+.......|.
T Consensus 270 d~~t~~~~~~~~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~ 349 (386)
T PF14583_consen 270 DPDTGERRRLMEMPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDR 349 (386)
T ss_dssp -TTT--EEEEEEE-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBS
T ss_pred CCCCCCceEEEeCCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCC
Confidence 77765432 23345567889987643332 15667777665432221121
Q ss_pred -CcEEEEEEccCCCEEEEEc-CCCcEEEEeC
Q psy10953 129 -DQVWCVCVAPDGDKFVSVG-EDKAVHMYSY 157 (181)
Q Consensus 129 -~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~ 157 (181)
..-....|||||+.++-.| .+|...||-.
T Consensus 350 q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 350 QVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp STT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred ccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 1134689999999976666 4676666644
No 377
>KOG1832|consensus
Probab=96.51 E-value=0.0043 Score=52.97 Aligned_cols=104 Identities=20% Similarity=0.233 Sum_probs=75.9
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCC--cEEEEecCC-Cceeee
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADH--TVRVWNFAR-RENMHT 124 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~--~i~v~d~~~-~~~~~~ 124 (181)
-.+++|+-+.++|+.|+..|.+++|++.+ +|...++.+.-+.+|..+++.+.-. ...+|++.. +...++
T Consensus 1104 fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hs 1183 (1516)
T KOG1832|consen 1104 FTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHS 1183 (1516)
T ss_pred eeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCcccc
Confidence 35899999999999999999999999864 4777888888888998776665433 467998865 233333
Q ss_pred eecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 125 FKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 125 ~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
+. .-.++.|+..-+.-+.|.....+.+||+.++.+
T Consensus 1184 f~---ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~ 1218 (1516)
T KOG1832|consen 1184 FD---EDKAVKFSNSLQFRALGTEADDALLYDVQTCSP 1218 (1516)
T ss_pred cc---ccceeehhhhHHHHHhcccccceEEEecccCcH
Confidence 33 334667776655555566667889999877644
No 378
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.36 E-value=0.47 Score=39.30 Aligned_cols=147 Identities=17% Similarity=0.327 Sum_probs=88.6
Q ss_pred EEEcCCCCEEEEEeC-----CC-----------cEEEEeCCCCcEEEEEecCCceE---------EEEEECCCCC---EE
Q psy10953 17 VVFSPDDKYVLSGSQ-----SG-----------KINLYGVETGKLEQIFDTRGKFT---------LSIAYSTDGH---WI 68 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~-----d~-----------~i~~~d~~~~~~~~~~~~~~~~~---------~~~~~s~d~~---~l 68 (181)
+++.|.-.++..+.. .+ .|.-.|++||++.-.++...+.+ .-+.+..+|+ .+
T Consensus 239 ~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v 318 (527)
T TIGR03075 239 GSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLL 318 (527)
T ss_pred eeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEE
Confidence 466666666654431 12 57788999999987666522111 1233335776 66
Q ss_pred EEeeCCCcEEEEeCCCCCc----------ccE---------------------------------------EEEEEcCCC
Q psy10953 69 ASGALDGIINIFDANTGHS----------SWV---------------------------------------LSTAFTRDG 99 (181)
Q Consensus 69 ~~~~~d~~v~i~d~~~~~~----------~~v---------------------------------------~~~~~s~~~ 99 (181)
+.+..+|.+++.|.++++. .+. ..++++|+.
T Consensus 319 ~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~ 398 (527)
T TIGR03075 319 AHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKT 398 (527)
T ss_pred EEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCC
Confidence 7899999999999876532 010 014566655
Q ss_pred CEEEEEeCC---------------------------------CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEE
Q psy10953 100 KFFISASAD---------------------------------HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 100 ~~l~~~~~d---------------------------------~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~ 146 (181)
.++.....+ +.+.=+|+.+++.....+...+...-.+.-.+..++.+
T Consensus 399 g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g 478 (527)
T TIGR03075 399 GLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYG 478 (527)
T ss_pred CEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEE
Confidence 444322222 34666777777766665533322211122245677778
Q ss_pred cCCCcEEEEeCCCCeeE
Q psy10953 147 GEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~~~ 163 (181)
..++.++.+|.++|+++
T Consensus 479 ~~~G~l~a~D~~TGe~l 495 (527)
T TIGR03075 479 TLEGYFKAFDAKTGEEL 495 (527)
T ss_pred CCCCeEEEEECCCCCEe
Confidence 88999999999999876
No 379
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.30 E-value=0.078 Score=38.62 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=23.0
Q ss_pred CcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 129 DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 129 ~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
..|..+.++.+|.-+++-+ ++..+.|+...+.=++
T Consensus 67 ~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~W~~ 101 (219)
T PF07569_consen 67 PNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGCWIR 101 (219)
T ss_pred CcEEEEEEcCCCCEEEEEe-CCCEEEeccccceeEE
Confidence 4577777887777766655 4677888765544333
No 380
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.26 E-value=0.34 Score=36.65 Aligned_cols=152 Identities=10% Similarity=0.128 Sum_probs=92.4
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-eEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-FTLSIAYSTDGHWIASGALDGIINIFDANTG- 85 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~- 85 (181)
+.....++++.|+|+.+.|++..+...-.++=...|+++..+...+. ....+.+..+|++.++--.++.++++.+...
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 33444589999999999998888777777776678888876654321 1134566666665555555666666544211
Q ss_pred ----------------C-cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc-ee--eeee--------cCCcEEEEEEc
Q psy10953 86 ----------------H-SSWVLSTAFTRDGKFFISASADHTVRVWNFARRE-NM--HTFK--------HADQVWCVCVA 137 (181)
Q Consensus 86 ----------------~-~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~-~~--~~~~--------~~~~v~~~~~s 137 (181)
+ +..-..++|+|..+.|..+=...-+.||...... .+ +... .-..+.++.|.
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 1 2334578999988766666666667777654322 11 0000 11246678888
Q ss_pred cCCCE-EEEEcCCCcEEEEeCCC
Q psy10953 138 PDGDK-FVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 138 p~g~~-l~~~~~d~~v~i~~~~~ 159 (181)
+..+. ++.+.+++.+.-.+...
T Consensus 242 ~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 242 AITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred CCCCcEEEEecCCceEEEEecCC
Confidence 75544 55555566666666643
No 381
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.13 E-value=0.4 Score=36.26 Aligned_cols=132 Identities=15% Similarity=0.247 Sum_probs=76.8
Q ss_pred EEEEEcCCCCE-EEEEeCCC-cEEEEeCCCCcEEEEEecCCceE-EE-EEECCCCCEEEEeeCC-----CcEEEEeCCCC
Q psy10953 15 WNVVFSPDDKY-VLSGSQSG-KINLYGVETGKLEQIFDTRGKFT-LS-IAYSTDGHWIASGALD-----GIINIFDANTG 85 (181)
Q Consensus 15 ~~~~~s~~g~~-l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~-~~-~~~s~d~~~l~~~~~d-----~~v~i~d~~~~ 85 (181)
..++|+|.-.+ ++.+=.=| ...++|..+.+..+.+....... +. -.|||||.+|+..-+| |.+=+||.+.+
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~ 150 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG 150 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc
Confidence 44555554433 22332223 35677777776655554322211 11 3689999999875433 67889998632
Q ss_pred ---------CcccEEEEEEcCCCCEEEEEeCC------------------CcEEEEecCCCceeeeee-----cCCcEEE
Q psy10953 86 ---------HSSWVLSTAFTRDGKFFISASAD------------------HTVRVWNFARRENMHTFK-----HADQVWC 133 (181)
Q Consensus 86 ---------~~~~v~~~~~s~~~~~l~~~~~d------------------~~i~v~d~~~~~~~~~~~-----~~~~v~~ 133 (181)
|.-....+.|.+||+.++.+.-. -++.+.|..++..+.+.. +...+..
T Consensus 151 fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRH 230 (366)
T COG3490 151 FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRH 230 (366)
T ss_pred cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceee
Confidence 22334668899999988765431 134444545555443332 2346888
Q ss_pred EEEccCCCEEEEE
Q psy10953 134 VCVAPDGDKFVSV 146 (181)
Q Consensus 134 ~~~sp~g~~l~~~ 146 (181)
+++.+||+..+.+
T Consensus 231 ld~g~dgtvwfgc 243 (366)
T COG3490 231 LDIGRDGTVWFGC 243 (366)
T ss_pred eeeCCCCcEEEEE
Confidence 8998888766543
No 382
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.11 E-value=0.53 Score=37.49 Aligned_cols=160 Identities=19% Similarity=0.250 Sum_probs=90.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC--------CceEEEEEEC-----CCC---C
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR--------GKFTLSIAYS-----TDG---H 66 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~s-----~d~---~ 66 (181)
++..++.....+..++.| |=.+++.|..+|++.+.|++...++..-... ...+.++.|+ .|+ -
T Consensus 78 P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi 156 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSI 156 (395)
T ss_dssp EEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEE
T ss_pred chhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccce
Confidence 456666777788999997 6678999999999999999887776542221 2234455554 344 4
Q ss_pred EEEEeeCCCcEEEEeCCC---------------CCcccEEEEE-EcCC-----------------C---CEEEEEeCCCc
Q psy10953 67 WIASGALDGIINIFDANT---------------GHSSWVLSTA-FTRD-----------------G---KFFISASADHT 110 (181)
Q Consensus 67 ~l~~~~~d~~v~i~d~~~---------------~~~~~v~~~~-~s~~-----------------~---~~l~~~~~d~~ 110 (181)
.+++|...|.+.+|.+.. .+...+..+. |+.+ | ..++....+..
T Consensus 157 ~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~ 236 (395)
T PF08596_consen 157 CLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESD 236 (395)
T ss_dssp EEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSE
T ss_pred EEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccc
Confidence 577888889999997641 1222222221 2111 1 12334444678
Q ss_pred EEEEecCCCceeeeeecC-CcEEEEEEc-----cCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 111 VRVWNFARRENMHTFKHA-DQVWCVCVA-----PDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 111 i~v~d~~~~~~~~~~~~~-~~v~~~~~s-----p~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
++++.+.+.+..+..... -....+++- ..+..|++-..+|.+++|.+..=+++
T Consensus 237 irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei 295 (395)
T PF08596_consen 237 IRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEI 295 (395)
T ss_dssp EEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EE
T ss_pred eEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHh
Confidence 999988876655544311 123334442 35667888889999999999664444
No 383
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.11 E-value=0.025 Score=48.43 Aligned_cols=71 Identities=21% Similarity=0.387 Sum_probs=50.5
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
......+++-+.+| +||+|+.+|.||+||--..+-...+..-+.++..+..+.||+|+++.. +.-+.+++.
T Consensus 576 ~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 576 SKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred cCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 33445677777666 588999999999999543333355666688889999999999988554 444555553
No 384
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.09 E-value=0.2 Score=39.99 Aligned_cols=49 Identities=12% Similarity=0.207 Sum_probs=39.4
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK 54 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 54 (181)
.+....-....+..+|++++.|+...-|.|.++|+.++..++.+..-.+
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRd 350 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRD 350 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCcc
Confidence 3444555678899999999999988889999999999998887765433
No 385
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.92 E-value=0.31 Score=38.75 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=65.5
Q ss_pred EEEECCCCCEEEEe-eCCC----cEEEEeCCCCCcc-----cE--EEEEEcCCCCEEEEEeCCC-----------cEEEE
Q psy10953 58 SIAYSTDGHWIASG-ALDG----IINIFDANTGHSS-----WV--LSTAFTRDGKFFISASADH-----------TVRVW 114 (181)
Q Consensus 58 ~~~~s~d~~~l~~~-~~d~----~v~i~d~~~~~~~-----~v--~~~~~s~~~~~l~~~~~d~-----------~i~v~ 114 (181)
.+.+||||++++.+ +..| .++++|+.++... .+ ..+.|.++++.|+....+. .|+.|
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~ 207 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRH 207 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEE
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEE
Confidence 57899999998865 3333 5999999887421 11 2389999998766655333 37777
Q ss_pred ecCCCcee--eeee--cCCc-EEEEEEccCCCEEEEEcC---C-CcEEEEeCCCC
Q psy10953 115 NFARRENM--HTFK--HADQ-VWCVCVAPDGDKFVSVGE---D-KAVHMYSYKPE 160 (181)
Q Consensus 115 d~~~~~~~--~~~~--~~~~-v~~~~~sp~g~~l~~~~~---d-~~v~i~~~~~~ 160 (181)
.+.+...- ..+. .... ...+..++|+++++..+. + ..+++.+...+
T Consensus 208 ~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 208 KLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp ETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred ECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 77665322 2332 2233 568889999999765442 2 45777777653
No 386
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=95.82 E-value=0.8 Score=37.14 Aligned_cols=62 Identities=23% Similarity=0.383 Sum_probs=40.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE------ec-CCceEEEEEECCCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF------DT-RGKFTLSIAYSTDG 65 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~------~~-~~~~~~~~~~s~d~ 65 (181)
+..+.......|.|+|.|||++|++--..|+|++++-.++...... .. ...-...++++|+-
T Consensus 22 ~~~va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 22 KKVLLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred EEEEECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 3445556666799999999987776654699999976554322211 11 12224588999874
No 387
>KOG2079|consensus
Probab=95.77 E-value=0.035 Score=48.36 Aligned_cols=97 Identities=15% Similarity=0.273 Sum_probs=67.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-------
Q psy10953 16 NVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH------- 86 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~------- 86 (181)
.++....+..++.|+..|.+...|..++ +-+..+. .+..+.+++|+.+|..++.|-.+|.|.+||...+.
T Consensus 92 v~s~a~~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e 170 (1206)
T KOG2079|consen 92 VISSAIVVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE 170 (1206)
T ss_pred eeeeeeeeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence 3444446667888998899998887643 2221221 23457799999999999999999999999986532
Q ss_pred ----cccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy10953 87 ----SSWVLSTAFTRDGKFFISASADHTVRVWN 115 (181)
Q Consensus 87 ----~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 115 (181)
...+..+.+..++..++++...|. +|.
T Consensus 171 ~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 171 HGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred cCCccceEEEEEEeCCCcEEEEccCCCc--eEE
Confidence 123444555666667888887776 554
No 388
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.73 E-value=0.83 Score=36.65 Aligned_cols=134 Identities=17% Similarity=0.257 Sum_probs=69.1
Q ss_pred EEEEEEcCCCCEEEEEeC--------------------CCcEEEEeCCCCcEEEEEecCC--ceEEEEEE--CCCCCEEE
Q psy10953 14 MWNVVFSPDDKYVLSGSQ--------------------SGKINLYGVETGKLEQIFDTRG--KFTLSIAY--STDGHWIA 69 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~--------------------d~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~--s~d~~~l~ 69 (181)
-+++-+.|..+.++|+.. -.++.+||..+.+.++.+..-. .....+.| .|+..+=+
T Consensus 183 gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gF 262 (461)
T PF05694_consen 183 GYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGF 262 (461)
T ss_dssp ---EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEE
T ss_pred CCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceE
Confidence 467778888888887753 2479999999999999887642 23334554 55555433
Q ss_pred E-eeCCCcEEEEeC-CCC---------------------C--------cccEEEEEEcCCCCEE-EEEeCCCcEEEEecC
Q psy10953 70 S-GALDGIINIFDA-NTG---------------------H--------SSWVLSTAFTRDGKFF-ISASADHTVRVWNFA 117 (181)
Q Consensus 70 ~-~~~d~~v~i~d~-~~~---------------------~--------~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~ 117 (181)
+ +.-.++|..|-. ..+ . ..-|+.+-+|.|.++| +++..+|.++.||+.
T Consensus 263 vg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDIS 342 (461)
T PF05694_consen 263 VGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDIS 342 (461)
T ss_dssp EEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-S
T ss_pred EEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecC
Confidence 3 233333433321 110 0 1346788999999965 556679999999997
Q ss_pred CCce---eeeeec-----------------CCcEEEEEEccCCCEEEEEc
Q psy10953 118 RREN---MHTFKH-----------------ADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 118 ~~~~---~~~~~~-----------------~~~v~~~~~sp~g~~l~~~~ 147 (181)
.... +.+... .+...-+.+|.||++++...
T Consensus 343 DP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 343 DPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp STTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred CCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 6432 222211 12235577899999886654
No 389
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.66 E-value=0.63 Score=34.80 Aligned_cols=129 Identities=16% Similarity=0.238 Sum_probs=76.9
Q ss_pred EEEEEec-CCceEEEEEECCCCCEEEEeeCCC--cEEEEeCCCCCcccE---------EEEEEcCCCCEEEEEeCCCcEE
Q psy10953 45 LEQIFDT-RGKFTLSIAYSTDGHWIASGALDG--IINIFDANTGHSSWV---------LSTAFTRDGKFFISASADHTVR 112 (181)
Q Consensus 45 ~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~--~v~i~d~~~~~~~~v---------~~~~~s~~~~~l~~~~~d~~i~ 112 (181)
++..+.+ ...+..++.|..+|..+-+.+.-| .++.+|+.++..... ..++.. +++...-...++...
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f 113 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGF 113 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEE
T ss_pred EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEE
Confidence 4455554 345667888877887777766554 678888887642211 112222 234444556789999
Q ss_pred EEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe---eEEEcCCCCcchhhh
Q psy10953 113 VWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE---EVEVNGGGGEEEEEE 176 (181)
Q Consensus 113 v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~~~~~ 176 (181)
+||..+.+.+.++..++.=|+++ .||+.|+.......++.+|..+.. .+.+...+..-...|
T Consensus 114 ~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LN 178 (264)
T PF05096_consen 114 VYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLN 178 (264)
T ss_dssp EEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EE
T ss_pred EEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcE
Confidence 99999999999999888999998 467777766667788888876553 334444443333333
No 390
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.58 E-value=0.67 Score=34.51 Aligned_cols=102 Identities=20% Similarity=0.159 Sum_probs=62.7
Q ss_pred EEEEEECCCCCEEEEee---CCCcEEEEeCCCC-----CcccEEEEEEcCCCCEEEEEeCCCcEEEEe-cCCCce-eeee
Q psy10953 56 TLSIAYSTDGHWIASGA---LDGIINIFDANTG-----HSSWVLSTAFTRDGKFFISASADHTVRVWN-FARREN-MHTF 125 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~---~d~~v~i~d~~~~-----~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d-~~~~~~-~~~~ 125 (181)
..+.++++|++.++... ....++++..... .........|++++...+....+...+++. ...+.. ....
T Consensus 26 ~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v 105 (253)
T PF10647_consen 26 VTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEV 105 (253)
T ss_pred ccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEe
Confidence 45789999998877655 2334444443221 112456678999988777666666666663 333321 1222
Q ss_pred e--c-CCcEEEEEEccCCCEEEEEcC---CCcEEEEeC
Q psy10953 126 K--H-ADQVWCVCVAPDGDKFVSVGE---DKAVHMYSY 157 (181)
Q Consensus 126 ~--~-~~~v~~~~~sp~g~~l~~~~~---d~~v~i~~~ 157 (181)
. . ...|..+++||||.+++.... ++.|.+-.+
T Consensus 106 ~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 106 DWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred cccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 2 1 127999999999999877662 456666543
No 391
>KOG2247|consensus
Probab=95.57 E-value=0.0029 Score=50.55 Aligned_cols=132 Identities=14% Similarity=0.227 Sum_probs=91.8
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCCc-------
Q psy10953 16 NVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIA-SGALDGIINIFDANTGHS------- 87 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~-~~~~d~~v~i~d~~~~~~------- 87 (181)
...|-|.+.-++.++.+..+..||-. ++........+.. ..++|+.+|..++ .+...+-+.+||+.+...
T Consensus 39 ~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~tg~a-ldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg 116 (615)
T KOG2247|consen 39 IHRWRPEGHNLAVACANTIVIYYDKA-GQVILELNPTGKA-LDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGG 116 (615)
T ss_pred eeeEecCCCceehhhhhhHHHhhhhh-cceecccCCchhH-hhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccC
Confidence 45678888889999889899999854 3333333333443 3788988886655 467788999999865321
Q ss_pred -ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 88 -SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 88 -~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
..-.-+.|++.+..++.+...+.+.+++..+.+...... |..++..+++.+.+..+. ++.|.
T Consensus 117 ~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil-~dcd~ 180 (615)
T KOG2247|consen 117 TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL-CDCDN 180 (615)
T ss_pred cchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee-cCcHH
Confidence 111226788988888888889999999988765444443 777888999988875444 44443
No 392
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.47 E-value=0.84 Score=34.99 Aligned_cols=140 Identities=15% Similarity=0.234 Sum_probs=71.2
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC-C-------
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA-N------- 83 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~-~------- 83 (181)
..+.++.-++||++++++..-....-||--.......-......+..+.|+|++.... ....+.++.=+. .
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~-~~~Gg~~~~s~~~~~~~~w~~ 223 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWM-LARGGQIQFSDDPDDGETWSE 223 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEE-EETTTEEEEEE-TTEEEEE--
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEE-EeCCcEEEEccCCCCcccccc
Confidence 3467788899999888876444445665432222232223456677899999987654 336777776651 1
Q ss_pred ----CCCccc-EEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee----ecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 84 ----TGHSSW-VLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF----KHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 84 ----~~~~~~-v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.....+ +..++|.++++..++++.. .+ +.....++.=... ..+..++.+.|.++.+-++ .+.+|-+--
T Consensus 224 ~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G-~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~ll~ 300 (302)
T PF14870_consen 224 PIIPIKTNGYGILDLAYRPPNEIWAVGGSG-TL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVLLR 300 (302)
T ss_dssp -B-TTSS--S-EEEEEESSSS-EEEEESTT--E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEEEE
T ss_pred ccCCcccCceeeEEEEecCCCCEEEEeCCc-cE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEEEE
Confidence 011222 7889999998888877644 33 2333333322221 1245688888887655565 455666654
Q ss_pred E
Q psy10953 155 Y 155 (181)
Q Consensus 155 ~ 155 (181)
|
T Consensus 301 ~ 301 (302)
T PF14870_consen 301 Y 301 (302)
T ss_dssp E
T ss_pred e
Confidence 4
No 393
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.47 E-value=0.69 Score=39.74 Aligned_cols=74 Identities=8% Similarity=0.150 Sum_probs=42.8
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--C--------cE-E--EEE-------e-cCCceEEEEEECCC---C
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET--G--------KL-E--QIF-------D-TRGKFTLSIAYSTD---G 65 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~--~--------~~-~--~~~-------~-~~~~~~~~~~~s~d---~ 65 (181)
....|..|.++|+|++++..|..+ |.+..+.. | +. + +.+ . .....+..+.|+|. +
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~ 161 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESD 161 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCC
Confidence 335678899999999999888754 44443421 1 11 0 000 0 11223456677664 3
Q ss_pred CEEEEeeCCCcEEEEeCCC
Q psy10953 66 HWIASGALDGIINIFDANT 84 (181)
Q Consensus 66 ~~l~~~~~d~~v~i~d~~~ 84 (181)
.+|+.-.+|+.+++||+..
T Consensus 162 ~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 162 SHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CeEEEEecCCEEEEEecCC
Confidence 5666666677777777653
No 394
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.46 E-value=0.08 Score=26.96 Aligned_cols=34 Identities=29% Similarity=0.559 Sum_probs=21.9
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeC-C--CcEEEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQ-S--GKINLY 38 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~-d--~~i~~~ 38 (181)
.+++..+..-...+|||||++|+.++. + |.-.||
T Consensus 2 ~~~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 2 KQLTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp EEES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCcccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 455666667789999999999876554 3 444444
No 395
>PHA02713 hypothetical protein; Provisional
Probab=95.45 E-value=0.84 Score=38.11 Aligned_cols=138 Identities=12% Similarity=0.135 Sum_probs=68.0
Q ss_pred CCCCEEEEEeCC------CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC-----cEEEEeCCCCC---
Q psy10953 21 PDDKYVLSGSQS------GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG-----IINIFDANTGH--- 86 (181)
Q Consensus 21 ~~g~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~-----~v~i~d~~~~~--- 86 (181)
-++...+.||.+ ..+..||..+++....-.............-+|+..+.|+.++ .+..||..+..
T Consensus 302 l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~ 381 (557)
T PHA02713 302 VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKM 381 (557)
T ss_pred ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEE
Confidence 366777777753 2477788877654322111111100111233677777787653 47788876431
Q ss_pred ----c-ccEEEEEEcCCCCEEEEEeCCC-----------------------cEEEEecCCCc--eeeeeecCCcEEEEEE
Q psy10953 87 ----S-SWVLSTAFTRDGKFFISASADH-----------------------TVRVWNFARRE--NMHTFKHADQVWCVCV 136 (181)
Q Consensus 87 ----~-~~v~~~~~s~~~~~l~~~~~d~-----------------------~i~v~d~~~~~--~~~~~~~~~~v~~~~~ 136 (181)
. ......+..-+|+.++.|+.++ .+..||..+.+ .+...... .....+.
T Consensus 382 ~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~-r~~~~~~ 460 (557)
T PHA02713 382 LPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTG-TIRPGVV 460 (557)
T ss_pred CCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcc-cccCcEE
Confidence 0 0000111123677777777542 36677776542 22222111 1111222
Q ss_pred ccCCCEEEEEcCCC------cEEEEeCCC
Q psy10953 137 APDGDKFVSVGEDK------AVHMYSYKP 159 (181)
Q Consensus 137 sp~g~~l~~~~~d~------~v~i~~~~~ 159 (181)
.-+|+.++.|+.++ .+..||..+
T Consensus 461 ~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 461 SHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred EECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 33677777777542 355676654
No 396
>PHA03098 kelch-like protein; Provisional
Probab=95.40 E-value=0.8 Score=37.82 Aligned_cols=137 Identities=12% Similarity=0.227 Sum_probs=68.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCC---
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALD------GIINIFDANTGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d------~~v~i~d~~~~~--- 86 (181)
+++..+.||.+ ..+..||..+++....-... .....+++ .-+++..+.|+.+ +.+..||+.+..
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~ 420 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSK 420 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeee
Confidence 67777777765 34777887776644321111 11111122 2356666666632 457788876421
Q ss_pred -----cccEEEEEEcCCCCEEEEEeCCC--------cEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC--
Q psy10953 87 -----SSWVLSTAFTRDGKFFISASADH--------TVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED-- 149 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~~~d~--------~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-- 149 (181)
...-...+...+++.++.|+.+. .+.+||..+.+ .+.....+ .....+..-+++.++.|+.+
T Consensus 421 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~-r~~~~~~~~~~~iyv~GG~~~~ 499 (534)
T PHA03098 421 GSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFP-RINASLCIFNNKIYVVGGDKYE 499 (534)
T ss_pred cCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcc-cccceEEEECCEEEEEcCCcCC
Confidence 00001112234566667776431 37888877643 22112111 11111122367777777754
Q ss_pred ---CcEEEEeCCCC
Q psy10953 150 ---KAVHMYSYKPE 160 (181)
Q Consensus 150 ---~~v~i~~~~~~ 160 (181)
+.+.+||..+.
T Consensus 500 ~~~~~v~~yd~~~~ 513 (534)
T PHA03098 500 YYINEIEVYDDKTN 513 (534)
T ss_pred cccceeEEEeCCCC
Confidence 46788887654
No 397
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.31 E-value=1.5 Score=37.00 Aligned_cols=95 Identities=16% Similarity=0.232 Sum_probs=62.4
Q ss_pred CCCCCEEEEeeCCCcEEEEeCCCC---------CcccEEEEEEc--CCCCEEEEEeCCCcEEEEecCC---------Cce
Q psy10953 62 STDGHWIASGALDGIINIFDANTG---------HSSWVLSTAFT--RDGKFFISASADHTVRVWNFAR---------REN 121 (181)
Q Consensus 62 s~d~~~l~~~~~d~~v~i~d~~~~---------~~~~v~~~~~s--~~~~~l~~~~~d~~i~v~d~~~---------~~~ 121 (181)
|.-++.-++-+....++|||.+.+ +...|.++.|. |+|+.+++.+..+.|.+|--.. ...
T Consensus 38 ss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~ 117 (631)
T PF12234_consen 38 SSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAP 117 (631)
T ss_pred cccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccce
Confidence 334444444444568999998753 24567777665 6899999999999999995321 122
Q ss_pred eeeee---c-CCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 122 MHTFK---H-ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 122 ~~~~~---~-~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+..+. + +.+|.+.+|.++|..++.++ +.+.+++-.
T Consensus 118 i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~ 156 (631)
T PF12234_consen 118 IRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW 156 (631)
T ss_pred eEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence 33331 2 24688899999997666444 678887754
No 398
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.30 E-value=0.13 Score=27.10 Aligned_cols=29 Identities=14% Similarity=0.356 Sum_probs=24.9
Q ss_pred EEEEEEcCCCC---EEEEEeCCCcEEEEeCCC
Q psy10953 14 MWNVVFSPDDK---YVLSGSQSGKINLYGVET 42 (181)
Q Consensus 14 ~~~~~~s~~g~---~l~~~~~d~~i~~~d~~~ 42 (181)
++++.|||+.. +|+.+-.-+.|.++|+++
T Consensus 3 vR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred eEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 68999998554 888888889999999985
No 399
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.30 E-value=0.85 Score=36.36 Aligned_cols=140 Identities=15% Similarity=0.186 Sum_probs=76.2
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC------CCCEEEEee-------CCCc--
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST------DGHWIASGA-------LDGI-- 76 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~------d~~~l~~~~-------~d~~-- 76 (181)
..+..++|+++..-|++|...|.|.+|....++... ...........+.+ .++ |.-.+ .+|.
T Consensus 2 ~~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~-l~di~~r~~~~~~~gf~P 78 (395)
T PF08596_consen 2 VSVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRFSLNNSPGK-LTDISDRAPPSLKEGFLP 78 (395)
T ss_dssp --EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S--GGGSS-S-EEE-GGG--TT-SEEEEE
T ss_pred ceEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCcccccccccCCCcc-eEEehhhCCcccccccCc
Confidence 357889999999999999999999999776544332 00000000111111 111 11100 0111
Q ss_pred EEEEeCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee---------cCCcEEEEEEcc-----CC--
Q psy10953 77 INIFDANTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK---------HADQVWCVCVAP-----DG-- 140 (181)
Q Consensus 77 v~i~d~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---------~~~~v~~~~~sp-----~g-- 140 (181)
..+++. ..+.|.+++.| |=-+++.|..+|.+.|.|++....+..-. ....+.++.|+- |+
T Consensus 79 ~~l~~~---~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 79 LTLLDA---KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEE------S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred hhheec---cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 112222 25678888876 44578889999999999998877665532 123467777762 33
Q ss_pred -CEEEEEcCCCcEEEEeCC
Q psy10953 141 -DKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 141 -~~l~~~~~d~~v~i~~~~ 158 (181)
=.+++|...|.+.+|.+.
T Consensus 155 Si~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEEEEEETTSEEEEEEEE
T ss_pred ceEEEEEeCCCCEEEEEEe
Confidence 257777888999999875
No 400
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=95.25 E-value=0.3 Score=36.46 Aligned_cols=95 Identities=16% Similarity=0.290 Sum_probs=60.2
Q ss_pred CCCCEEEEeeCCCcEEEEeCCC-C------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee------------
Q psy10953 63 TDGHWIASGALDGIINIFDANT-G------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH------------ 123 (181)
Q Consensus 63 ~d~~~l~~~~~d~~v~i~d~~~-~------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~------------ 123 (181)
..++.|+.|..+| +++++... . +...|..+...|+-+.+++-+ |+.++++++.......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~ 82 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS 82 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence 3578889998888 88888821 1 233488888888877776665 5999999987543222
Q ss_pred ---eeecCCcEEEEE--EccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 124 ---TFKHADQVWCVC--VAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 124 ---~~~~~~~v~~~~--~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.......+...+ -.+.+....++...+.|.+|.+..
T Consensus 83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~ 123 (275)
T PF00780_consen 83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWND 123 (275)
T ss_pred ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEEC
Confidence 112223344444 223444555555566888888755
No 401
>PRK10115 protease 2; Provisional
Probab=95.23 E-value=1.7 Score=37.23 Aligned_cols=102 Identities=13% Similarity=0.053 Sum_probs=61.8
Q ss_pred eEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC------CcEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD------GIINIFD 81 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d------~~v~i~d 81 (181)
.+..+.+||||++|+.+.+. .+|++.|+.+++.+........ ..++|++|++.|+....+ ..|+.++
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 35667899999999865432 3688999988874322111111 358999999887765432 3677777
Q ss_pred CCCCC--c--------ccE-EEEEEcCCCCEEEEEeC---CCcEEEEec
Q psy10953 82 ANTGH--S--------SWV-LSTAFTRDGKFFISASA---DHTVRVWNF 116 (181)
Q Consensus 82 ~~~~~--~--------~~v-~~~~~s~~~~~l~~~~~---d~~i~v~d~ 116 (181)
+.++. . ... .....+.++++++..+. +..+.+++.
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 76541 1 111 13334547776554333 356888884
No 402
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.22 E-value=0.14 Score=26.99 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=21.4
Q ss_pred cEEEEEEcCC-C--CEEEEEeCCCcEEEEecCC
Q psy10953 89 WVLSTAFTRD-G--KFFISASADHTVRVWNFAR 118 (181)
Q Consensus 89 ~v~~~~~s~~-~--~~l~~~~~d~~i~v~d~~~ 118 (181)
.++++.|||. + .+|+.+...+.+.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4667778864 3 4777777777888888774
No 403
>KOG3630|consensus
Probab=95.19 E-value=0.46 Score=42.24 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=67.0
Q ss_pred EEEECCCCCEEEEe--eCCCcEEEEeCCCCC-------------------cccEEEEEEcCCCC-EEEEEeCCCcEEEEe
Q psy10953 58 SIAYSTDGHWIASG--ALDGIINIFDANTGH-------------------SSWVLSTAFTRDGK-FFISASADHTVRVWN 115 (181)
Q Consensus 58 ~~~~s~d~~~l~~~--~~d~~v~i~d~~~~~-------------------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d 115 (181)
.+...+|+...++. +.+-.|+.||++.-. .....++.|.|.-- ..+.+..|+.|++.-
T Consensus 105 ~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~ 184 (1405)
T KOG3630|consen 105 IFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKS 184 (1405)
T ss_pred EEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhh
Confidence 45556677655543 334488899986321 12345667887642 345566788888876
Q ss_pred cCCCceee-eeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 116 FARRENMH-TFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 116 ~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+......+ .++.....++++|+|.|+.++.|-.+|++.-|...
T Consensus 185 ~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~ 228 (1405)
T KOG3630|consen 185 TKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS 228 (1405)
T ss_pred hhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecc
Confidence 65433222 34566778999999999999999999988776653
No 404
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=95.07 E-value=1.2 Score=34.30 Aligned_cols=132 Identities=16% Similarity=0.303 Sum_probs=79.4
Q ss_pred CCEEEEEeC----------CCcEEEEeCCCC-----cEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC
Q psy10953 23 DKYVLSGSQ----------SGKINLYGVETG-----KLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH 86 (181)
Q Consensus 23 g~~l~~~~~----------d~~i~~~d~~~~-----~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~ 86 (181)
..+++.|.. .|.|.++++... ++...... ....+.+++-- .++ |+++. .+.+.+|++....
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~ 118 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSK 118 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcc
Confidence 467776653 288999999874 33322221 13335555433 344 54444 4789999886544
Q ss_pred -c---------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-Cceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 87 -S---------SWVLSTAFTRDGKFFISASADHTVRVWNFAR-RENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 87 -~---------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
- ..+.++ ...+++++.+...+.+.++.... ...+..+. .+..+.++.+-++++.++++..+|.+
T Consensus 119 ~l~~~~~~~~~~~i~sl--~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl 196 (321)
T PF03178_consen 119 TLLKKAFYDSPFYITSL--SVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNL 196 (321)
T ss_dssp SEEEEEEE-BSSSEEEE--EEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEE
T ss_pred cchhhheecceEEEEEE--eccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeE
Confidence 1 123333 33466899999988888886543 22233332 34457788887677788889999999
Q ss_pred EEEeCCC
Q psy10953 153 HMYSYKP 159 (181)
Q Consensus 153 ~i~~~~~ 159 (181)
.++...+
T Consensus 197 ~~l~~~~ 203 (321)
T PF03178_consen 197 FVLRYNP 203 (321)
T ss_dssp EEEEE-S
T ss_pred EEEEECC
Confidence 9988864
No 405
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=95.06 E-value=0.096 Score=41.97 Aligned_cols=153 Identities=13% Similarity=0.186 Sum_probs=87.8
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEE--EEEec-CCce---EE-EEEECCCCCEEEEeeCCCcE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLE--QIFDT-RGKF---TL-SIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~--~~~~~-~~~~---~~-~~~~s~d~~~l~~~~~d~~v 77 (181)
..+...+.++..+-..|||+.+..-+. .++.++++....+. ...+. .++. +. .+..-.-|..+..++.||.|
T Consensus 214 ~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~v 292 (733)
T COG4590 214 RLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLV 292 (733)
T ss_pred hhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCce
Confidence 335556667788889999999876654 67888877655432 12211 1211 10 11112235667888899988
Q ss_pred EEE-eCCCC---CcccEEEEEEcCCC----------CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEE
Q psy10953 78 NIF-DANTG---HSSWVLSTAFTRDG----------KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 78 ~i~-d~~~~---~~~~v~~~~~s~~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l 143 (181)
.-| |.+.+ |-..++...+.|.. +-+++-...|++..+.....+.+-.......+..+++||++.++
T Consensus 293 sQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~L 372 (733)
T COG4590 293 SQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYL 372 (733)
T ss_pred eeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchh
Confidence 876 55432 33334444444332 34455555666666554433333222233356678999999888
Q ss_pred EEEcCCCcEEEEeCCC
Q psy10953 144 VSVGEDKAVHMYSYKP 159 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~ 159 (181)
++-. .+.++++.+..
T Consensus 373 l~e~-~gki~~~~l~N 387 (733)
T COG4590 373 LSED-QGKIRLAQLEN 387 (733)
T ss_pred eeec-CCceEEEEecC
Confidence 7543 46788877643
No 406
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.06 E-value=1.2 Score=34.51 Aligned_cols=95 Identities=22% Similarity=0.312 Sum_probs=51.0
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE-e------cCCceEEEEEECCC----CCEEEEeeCC-------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF-D------TRGKFTLSIAYSTD----GHWIASGALD------- 74 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~-~------~~~~~~~~~~~s~d----~~~l~~~~~d------- 74 (181)
..+.|+|.|||+.+++ ...|+|++++ ..+.....+ . ....-...++++|+ +...++....
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 3589999999887664 5699999999 444431111 1 11223468899995 3333333311
Q ss_pred -CcEEEEeCCC-------------------CCcccEEEEEEcCCCCEEEEEeCCC
Q psy10953 75 -GIINIFDANT-------------------GHSSWVLSTAFTRDGKFFISASADH 109 (181)
Q Consensus 75 -~~v~i~d~~~-------------------~~~~~v~~~~~s~~~~~l~~~~~d~ 109 (181)
..|.-|.... ........+.|.|+|.++++.+..+
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 1232222211 1112345689999998777766544
No 407
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.98 E-value=0.18 Score=25.83 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=26.3
Q ss_pred CCCCEEEEEe-CCCcEEEEecCCCceeeeeecCCcEEEEEEc
Q psy10953 97 RDGKFFISAS-ADHTVRVWNFARRENMHTFKHADQVWCVCVA 137 (181)
Q Consensus 97 ~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 137 (181)
|+++.|..+. .++.|.++|..+++.+..+.-....+.++|+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~~ 42 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAVS 42 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEeC
Confidence 5666544444 5778889998887777666654445555553
No 408
>PHA03098 kelch-like protein; Provisional
Probab=94.97 E-value=0.98 Score=37.31 Aligned_cols=137 Identities=9% Similarity=0.113 Sum_probs=66.7
Q ss_pred CCCCEEEEEeCCC------cEEEEeCCCCcEEEEEecCCce-EEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCC--
Q psy10953 21 PDDKYVLSGSQSG------KINLYGVETGKLEQIFDTRGKF-TLSIAYSTDGHWIASGALD-----GIINIFDANTGH-- 86 (181)
Q Consensus 21 ~~g~~l~~~~~d~------~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~d~~~l~~~~~d-----~~v~i~d~~~~~-- 86 (181)
.++..++.|+.++ .+..||..+++....-...... ..++. .-+++.++.|+.+ ..+..||..+..
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVT-VFNNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEE-EECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 4666677776543 4677888777654322111111 01111 2256777777765 346677765421
Q ss_pred ------cccEEEEEEcCCCCEEEEEeCC------CcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCCC--
Q psy10953 87 ------SSWVLSTAFTRDGKFFISASAD------HTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGEDK-- 150 (181)
Q Consensus 87 ------~~~v~~~~~s~~~~~l~~~~~d------~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-- 150 (181)
.......+..-+++.++.|+.+ ..+..||+.+.+ .....+.+ .....+...+++.++.||.+.
T Consensus 372 ~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~ 450 (534)
T PHA03098 372 EEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPIS-HYGGCAIYHDGKIYVIGGISYID 450 (534)
T ss_pred eCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcc-ccCceEEEECCEEEEECCccCCC
Confidence 0001111122356777777632 357888876542 11111111 111122334566667676431
Q ss_pred ------cEEEEeCCC
Q psy10953 151 ------AVHMYSYKP 159 (181)
Q Consensus 151 ------~v~i~~~~~ 159 (181)
.+.+||..+
T Consensus 451 ~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 451 NIKVYNIVESYNPVT 465 (534)
T ss_pred CCcccceEEEecCCC
Confidence 267777654
No 409
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.90 E-value=1.2 Score=33.44 Aligned_cols=147 Identities=17% Similarity=0.108 Sum_probs=86.1
Q ss_pred EEEEcCCCCEEEEEeCCC--cEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcc----
Q psy10953 16 NVVFSPDDKYVLSGSQSG--KINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSS---- 88 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~---- 88 (181)
.+.|.++|.++-+.+.-| .|+.+|+.+++........ ..+-..++...|.- ....=.++...+||..+-+..
T Consensus 49 GL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l-~qLTWk~~~~f~yd~~tl~~~~~~~ 127 (264)
T PF05096_consen 49 GLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKL-YQLTWKEGTGFVYDPNTLKKIGTFP 127 (264)
T ss_dssp EEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEE-EEEESSSSEEEEEETTTTEEEEEEE
T ss_pred cEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEE-EEEEecCCeEEEEccccceEEEEEe
Confidence 466767788777777666 6999999999988665543 23444555554322 222334778899998753211
Q ss_pred ---cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec------CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 89 ---WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH------ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 89 ---~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
.=..+ ..+|+.|+.+.-...++++|..+.+....+.- -..++.+.+- +|...|=.=....|...|..+
T Consensus 128 y~~EGWGL--t~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~t 204 (264)
T PF05096_consen 128 YPGEGWGL--TSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPET 204 (264)
T ss_dssp -SSS--EE--EECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT
T ss_pred cCCcceEE--EcCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCC
Confidence 01122 25677777777778899999988776665531 1235566665 454444344556777778777
Q ss_pred CeeEEEc
Q psy10953 160 EEEVEVN 166 (181)
Q Consensus 160 ~~~~~~~ 166 (181)
|.-+...
T Consensus 205 G~V~~~i 211 (264)
T PF05096_consen 205 GKVVGWI 211 (264)
T ss_dssp -BEEEEE
T ss_pred CeEEEEE
Confidence 7665544
No 410
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.86 E-value=1.3 Score=33.91 Aligned_cols=95 Identities=15% Similarity=0.247 Sum_probs=54.3
Q ss_pred ceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-
Q psy10953 54 KFTLSIAYSTDGHWIASGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT- 124 (181)
Q Consensus 54 ~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~- 124 (181)
..+..+.-++||+++++++.-....-||.-. .....+..+.|+|++.+...+ ..+.+++=+.........
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~ 223 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSE 223 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE--
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccccc
Confidence 3355677899999888877666666777532 234679999999998876544 778888776222111111
Q ss_pred --ee---cCCcEEEEEEccCCCEEEEEcCC
Q psy10953 125 --FK---HADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 125 --~~---~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
.+ ..-.+..+++.++++..++|+..
T Consensus 224 ~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 224 PIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp -B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred ccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 11 11237889999998888877654
No 411
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.83 E-value=0.32 Score=35.43 Aligned_cols=28 Identities=21% Similarity=0.449 Sum_probs=24.3
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCcEE
Q psy10953 19 FSPDDKYVLSGSQSGKINLYGVETGKLE 46 (181)
Q Consensus 19 ~s~~g~~l~~~~~d~~i~~~d~~~~~~~ 46 (181)
+..++++|++-..+|.+++||+.+++..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~ 45 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAV 45 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeec
Confidence 5668999999999999999999988753
No 412
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.80 E-value=0.24 Score=25.39 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=24.2
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCCCcEEEEEec
Q psy10953 21 PDDKYVLSGS-QSGKINLYGVETGKLEQIFDT 51 (181)
Q Consensus 21 ~~g~~l~~~~-~d~~i~~~d~~~~~~~~~~~~ 51 (181)
|++++|++++ .+++|.++|..+++....+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 6788777655 578999999998888776655
No 413
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.57 E-value=1.9 Score=34.51 Aligned_cols=53 Identities=17% Similarity=0.254 Sum_probs=35.9
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDG 65 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~ 65 (181)
.+..+++||+|+++|.-..+|++.+.+..-.+....+... ......+.|.-+.
T Consensus 218 ~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 218 PIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 4678888999998888888888888877655555555443 1223466675544
No 414
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.48 E-value=0.94 Score=37.10 Aligned_cols=133 Identities=14% Similarity=0.254 Sum_probs=83.1
Q ss_pred CCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-------EEEEeeCCCcEEEEeCCCCC-------
Q psy10953 22 DDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-------WIASGALDGIINIFDANTGH------- 86 (181)
Q Consensus 22 ~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-------~l~~~~~d~~v~i~d~~~~~------- 86 (181)
|.++|+ .|+.-..++-.|++.|+++..+..+... -+.+.|+.+ .-+.|-++..|.-.|++-.-
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e 555 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE 555 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence 444443 4555567777889999998888777664 367777532 22346667777777765321
Q ss_pred -cccEEEEEEcC----CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 87 -SSWVLSTAFTR----DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 87 -~~~v~~~~~s~----~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
..+...=.|+. ..-+++.++..|.|++||--....-..++ ....|-.+..+.+|+++++.+. ..+.+-+.
T Consensus 556 sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~ 631 (776)
T COG5167 556 SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDV 631 (776)
T ss_pred ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEec
Confidence 11222222333 23478999999999999853322212223 4567888889999999887774 46666665
No 415
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=94.35 E-value=0.52 Score=32.91 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=24.7
Q ss_pred ccEEEEEEcCCC------CEEEEEeCCCcEEEEecCC
Q psy10953 88 SWVLSTAFTRDG------KFFISASADHTVRVWNFAR 118 (181)
Q Consensus 88 ~~v~~~~~s~~~------~~l~~~~~d~~i~v~d~~~ 118 (181)
..+.+++|||.| -+|++.+.++.+.+|....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 478999999954 3688888999999997543
No 416
>PHA02790 Kelch-like protein; Provisional
Probab=94.07 E-value=2.8 Score=34.34 Aligned_cols=136 Identities=8% Similarity=0.017 Sum_probs=66.3
Q ss_pred CCCCEEEEEeCC--CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC---cEEEEeCCCCC-------c-
Q psy10953 21 PDDKYVLSGSQS--GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG---IINIFDANTGH-------S- 87 (181)
Q Consensus 21 ~~g~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~---~v~i~d~~~~~-------~- 87 (181)
-+|...+.|+.+ .++..||..+++....-.............-+|+..+.|+.++ .+..||+.+.. .
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~ 396 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY 396 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC
Confidence 467777777754 3577788766554332211111111111223577677776543 46678875421 0
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC-----CcEEEEeCCCC
Q psy10953 88 SWVLSTAFTRDGKFFISASADHTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED-----KAVHMYSYKPE 160 (181)
Q Consensus 88 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-----~~v~i~~~~~~ 160 (181)
..-...+..-+|+..+.|+ .+.+||..+.+ .+...+.+ ....-+.--+|+.++.||.+ ..+..||..++
T Consensus 397 ~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~-r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 397 PHYKSCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYP-RDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred ccccceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCC-ccccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence 0001112234566666653 46778876542 22222211 11111223367778888754 34666666543
No 417
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=93.92 E-value=1.2 Score=35.68 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=51.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCC--cEEEEEEccC----------------CCEEEE-EcC
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HAD--QVWCVCVAPD----------------GDKFVS-VGE 148 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~--~v~~~~~sp~----------------g~~l~~-~~~ 148 (181)
.+..+..+|++++.++...-|.|.++|+.++..+..++ +.+ .-|--...+. ..+|+. .-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyapr 388 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPR 388 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEecc
Confidence 35678999999999888888999999998876555443 111 1111111111 123443 345
Q ss_pred CCcEEEEeCCCCeeEEEc
Q psy10953 149 DKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 149 d~~v~i~~~~~~~~~~~~ 166 (181)
.|.|.+|+++.|.++...
T Consensus 389 Rg~lEvW~~~~g~Rv~a~ 406 (415)
T PF14655_consen 389 RGILEVWSMRQGPRVAAF 406 (415)
T ss_pred CCeEEEEecCCCCEEEEE
Confidence 789999999999887643
No 418
>KOG4441|consensus
Probab=93.90 E-value=2.3 Score=35.68 Aligned_cols=136 Identities=19% Similarity=0.289 Sum_probs=73.3
Q ss_pred CCCEEEEEeCC-C-----cEEEEeCCCCcEEEEEecCCceE-EEEEECCCCCEEEEeeCCC-----cEEEEeCCCCC---
Q psy10953 22 DDKYVLSGSQS-G-----KINLYGVETGKLEQIFDTRGKFT-LSIAYSTDGHWIASGALDG-----IINIFDANTGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d-~-----~i~~~d~~~~~~~~~~~~~~~~~-~~~~~s~d~~~l~~~~~d~-----~v~i~d~~~~~--- 86 (181)
+|...++|+.| + ++..||..+++....-....... .+++ .-+|...+.|+.|| ++-.||..+..
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~-~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~ 410 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVA-VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP 410 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeE-EECCEEEEEeccccccccccEEEecCCCCcccc
Confidence 66778889888 3 57788888777544222221111 1111 23677788898886 46667765421
Q ss_pred ----cccEE-EEEEcCCCCEEEEEeCCC------cEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCCCc--
Q psy10953 87 ----SSWVL-STAFTRDGKFFISASADH------TVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGEDKA-- 151 (181)
Q Consensus 87 ----~~~v~-~~~~s~~~~~l~~~~~d~------~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~-- 151 (181)
..... ...-.-+|+..+.|+.++ ++..||..+.. ........ +...-+..-++..++.||.|+.
T Consensus 411 va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~-R~~~g~a~~~~~iYvvGG~~~~~~ 489 (571)
T KOG4441|consen 411 VAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTR-RSGFGVAVLNGKIYVVGGFDGTSA 489 (571)
T ss_pred cCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccc-cccceEEEECCEEEEECCccCCCc
Confidence 11111 122234678888888543 56777776543 11111111 1111122346777788886652
Q ss_pred ---EEEEeCCC
Q psy10953 152 ---VHMYSYKP 159 (181)
Q Consensus 152 ---v~i~~~~~ 159 (181)
|..||..+
T Consensus 490 ~~~VE~ydp~~ 500 (571)
T KOG4441|consen 490 LSSVERYDPET 500 (571)
T ss_pred cceEEEEcCCC
Confidence 56666544
No 419
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=93.74 E-value=2.3 Score=32.20 Aligned_cols=144 Identities=18% Similarity=0.245 Sum_probs=88.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC---------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT--------- 84 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------- 84 (181)
.+.++-+|||..-+++...+.|--.|-.+|+..+.--..+.....+...|||..-++=... .|.-.|.++
T Consensus 64 p~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp 142 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLP 142 (353)
T ss_pred ccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecc
Confidence 3667888899888888888888888888888876544444444467778888654443222 233334322
Q ss_pred -CCc-ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 85 -GHS-SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 85 -~~~-~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.|. .-.....|++.|++.+++... .---.|..+ ..+..+. .....+.+|..|||..-++.-.++.|...|-..+
T Consensus 143 ~~~a~~nlet~vfD~~G~lWFt~q~G-~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp~~~ 220 (353)
T COG4257 143 LEHADANLETAVFDPWGNLWFTGQIG-AYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDPFAG 220 (353)
T ss_pred cccCCCcccceeeCCCccEEEeeccc-cceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEcccccC
Confidence 121 123456799999988887742 111111111 1233333 2345778899999998887666777776665544
No 420
>KOG2444|consensus
Probab=93.50 E-value=0.29 Score=35.62 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=46.2
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeee---ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCCC
Q psy10953 98 DGKFFISASADHTVRVWNFARRENMHTF---KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGGG 170 (181)
Q Consensus 98 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~ 170 (181)
-+..+++|+.+|.|++|+.......... ....-...+....++.+.++++.++.|+.|+..+...+...+...
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 3567889999999999987532111111 111111222223345567888889999999999888777666644
No 421
>KOG4441|consensus
Probab=93.47 E-value=2.9 Score=35.08 Aligned_cols=137 Identities=16% Similarity=0.224 Sum_probs=73.4
Q ss_pred cCCCCEEEEEeCCC------cEEEEeCCCCcEEEEEecCCce-EEEEEECCCCCEEEEeeCC------CcEEEEeCCCCC
Q psy10953 20 SPDDKYVLSGSQSG------KINLYGVETGKLEQIFDTRGKF-TLSIAYSTDGHWIASGALD------GIINIFDANTGH 86 (181)
Q Consensus 20 s~~g~~l~~~~~d~------~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~d~~~l~~~~~d------~~v~i~d~~~~~ 86 (181)
+..+.+++.|+.++ .+..||..+++........... ..+++.. ++...++|+.| ..+..||.....
T Consensus 282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~ 360 (571)
T KOG4441|consen 282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ 360 (571)
T ss_pred CCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc
Confidence 33466677777763 5778888877554433322211 1233333 46777888888 356677776432
Q ss_pred --------cccEEEEEEcCCCCEEEEEeCCC-----cEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCCC-
Q psy10953 87 --------SSWVLSTAFTRDGKFFISASADH-----TVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGEDK- 150 (181)
Q Consensus 87 --------~~~v~~~~~s~~~~~l~~~~~d~-----~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~- 150 (181)
......-.-.-+|...+.|+.|| ++-.||..+.+ .+..... ..-...+..-+|+..++||.++
T Consensus 361 W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~-~r~~~gv~~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 361 WTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT-RRSGHGVAVLGGKLYIIGGGDGS 439 (571)
T ss_pred eeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCc-ceeeeEEEEECCEEEEEcCcCCC
Confidence 00000001123577888888885 46677766543 1111111 1122223344788888888553
Q ss_pred -----cEEEEeCC
Q psy10953 151 -----AVHMYSYK 158 (181)
Q Consensus 151 -----~v~i~~~~ 158 (181)
.+..||..
T Consensus 440 ~~~l~sve~YDP~ 452 (571)
T KOG4441|consen 440 SNCLNSVECYDPE 452 (571)
T ss_pred ccccceEEEEcCC
Confidence 45667753
No 422
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.75 E-value=3.5 Score=31.45 Aligned_cols=103 Identities=10% Similarity=0.129 Sum_probs=70.0
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc---------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee---
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANTGHS---------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH--- 123 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~---------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~--- 123 (181)
+.++.|+|+.+.|++........++=...|.- .....+.+.-+|++.++--.++.++++.+.......
T Consensus 88 vS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~ 167 (316)
T COG3204 88 VSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAK 167 (316)
T ss_pred ccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEecc
Confidence 66899999999988876665555553332221 112345666778888888888899988776542211
Q ss_pred --ee-----ec-CCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 124 --TF-----KH-ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 124 --~~-----~~-~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
.+ .+ ....-++|++|..+.|+.+-+-+-+.||...
T Consensus 168 ~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 168 VQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred ceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 11 12 3457799999999999988888877777764
No 423
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=92.61 E-value=5.4 Score=33.37 Aligned_cols=108 Identities=12% Similarity=0.217 Sum_probs=64.5
Q ss_pred eeEEEEEEcCCCC----EEEEEeCCCcEEEEeCC-----CCcEEEEEec--CCce---EEEEEECCCCCEEEEeeCCCcE
Q psy10953 12 VDMWNVVFSPDDK----YVLSGSQSGKINLYGVE-----TGKLEQIFDT--RGKF---TLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 12 ~~~~~~~~s~~g~----~l~~~~~d~~i~~~d~~-----~~~~~~~~~~--~~~~---~~~~~~s~d~~~l~~~~~d~~v 77 (181)
..|..++|+|-+. -|++....++|.+|-+. .++....... ...+ ..++.|+|....|+.-.....-
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS 136 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS 136 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence 4578999998532 45556668899999875 2333221111 1111 1257899988877664443333
Q ss_pred EEEeCCC---------CCcccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCC
Q psy10953 78 NIFDANT---------GHSSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARR 119 (181)
Q Consensus 78 ~i~d~~~---------~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~ 119 (181)
.+++++. ...+.|.+..|.+||+.|+.+- ..=.-++||-...
T Consensus 137 V~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 137 VLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred EeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 3344321 2346788999999998665443 3345779986543
No 424
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=92.50 E-value=1.8 Score=34.07 Aligned_cols=92 Identities=11% Similarity=0.130 Sum_probs=50.4
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEE-eCCCC-----cEEEEEe---cC----CceEEEEEECCCCCEEEEeeCC----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLY-GVETG-----KLEQIFD---TR----GKFTLSIAYSTDGHWIASGALD---- 74 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~-d~~~~-----~~~~~~~---~~----~~~~~~~~~s~d~~~l~~~~~d---- 74 (181)
.....+++.++| +++ ++.. .|..+ |.... +...++. .. .+....+.|.|||.+.++-+..
T Consensus 72 ~~p~Gi~~~~~G-lyV-~~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~ 148 (367)
T TIGR02604 72 SMVTGLAVAVGG-VYV-ATPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASK 148 (367)
T ss_pred CCccceeEecCC-EEE-eCCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCce
Confidence 334778898888 444 4444 44434 54321 2222222 11 2234578999999876653311
Q ss_pred ---------------CcEEEEeCCCCC-------cccEEEEEEcCCCCEEEEEe
Q psy10953 75 ---------------GIINIFDANTGH-------SSWVLSTAFTRDGKFFISAS 106 (181)
Q Consensus 75 ---------------~~v~i~d~~~~~-------~~~v~~~~~s~~~~~l~~~~ 106 (181)
+.+.-++...+. ..-...++|+|+|+++++-.
T Consensus 149 ~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 149 VTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred eccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence 345555554321 11235789999999877644
No 425
>KOG1916|consensus
Probab=92.50 E-value=0.81 Score=39.90 Aligned_cols=127 Identities=19% Similarity=0.381 Sum_probs=72.2
Q ss_pred CcEEEEeCC--CCcEEEEEe-----cCCceEEEEEEC---CCCCEEEEeeCCCcEEEEeCCC-------CCcccEEE---
Q psy10953 33 GKINLYGVE--TGKLEQIFD-----TRGKFTLSIAYS---TDGHWIASGALDGIINIFDANT-------GHSSWVLS--- 92 (181)
Q Consensus 33 ~~i~~~d~~--~~~~~~~~~-----~~~~~~~~~~~s---~d~~~l~~~~~d~~v~i~d~~~-------~~~~~v~~--- 92 (181)
|.+.+||+. .|++...+. ..+....-+.|. +..-++..+..++.+.+....+ +|..++..
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~ 232 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAF 232 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHH
Confidence 567788765 455432222 112222233443 3556777888888888776542 35444332
Q ss_pred --------EEEcCCCCEEEEEeCCCcEEEEecCC-----Cceeeeee-cCC-cEEEEEEccCC---------CEEEEEcC
Q psy10953 93 --------TAFTRDGKFFISASADHTVRVWNFAR-----RENMHTFK-HAD-QVWCVCVAPDG---------DKFVSVGE 148 (181)
Q Consensus 93 --------~~~s~~~~~l~~~~~d~~i~v~d~~~-----~~~~~~~~-~~~-~v~~~~~sp~g---------~~l~~~~~ 148 (181)
..+||||+.+++++.||.+++|.+.- ..+++.++ |.+ +-.|.-|+.+. .++++++.
T Consensus 233 ~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd 312 (1283)
T KOG1916|consen 233 FAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTD 312 (1283)
T ss_pred HhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEeccc
Confidence 34899999999999999999887542 22344443 321 11222233322 34555554
Q ss_pred -CCcEEEEeCCC
Q psy10953 149 -DKAVHMYSYKP 159 (181)
Q Consensus 149 -d~~v~i~~~~~ 159 (181)
+..+++|.-.+
T Consensus 313 ~nre~k~w~~a~ 324 (1283)
T KOG1916|consen 313 VNREEKFWAEAP 324 (1283)
T ss_pred CCcceeEeeccc
Confidence 56788888544
No 426
>KOG2395|consensus
Probab=92.39 E-value=0.51 Score=38.56 Aligned_cols=67 Identities=19% Similarity=0.364 Sum_probs=47.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
..|++-..+ .++++|+.+|.||+||--..+-...+..-+..+.-+..+.||++++... +..+-+.++
T Consensus 433 Fsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 433 FSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred cceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 344444444 4688999999999999744444456667788888899999999887443 445555554
No 427
>PRK13684 Ycf48-like protein; Provisional
Probab=92.39 E-value=4.2 Score=31.60 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=74.4
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK-LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG----- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~----- 85 (181)
..++++.+.|++.+++++. .|.+..-.-..++ ...........+..+.+.++++.++++ ..|.+.+-....+
T Consensus 173 g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~ 250 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSK 250 (334)
T ss_pred ceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcccc
Confidence 3467888999887665554 5554432112222 222222233445678888988866554 4555543222211
Q ss_pred -------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 86 -------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 86 -------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
....+.++.+.|+++.++++ .+|.+. .....++.-.... .+...+.+.+-.+++.++ .+..|.|-.
T Consensus 251 ~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~ 327 (334)
T PRK13684 251 PIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLR 327 (334)
T ss_pred ccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEE
Confidence 11235678888888866554 456554 3333333222221 123577777776666655 555677666
Q ss_pred Ee
Q psy10953 155 YS 156 (181)
Q Consensus 155 ~~ 156 (181)
|+
T Consensus 328 ~~ 329 (334)
T PRK13684 328 YV 329 (334)
T ss_pred ec
Confidence 54
No 428
>PRK10115 protease 2; Provisional
Probab=92.35 E-value=6.7 Score=33.79 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=62.0
Q ss_pred EEEEEECCCCCEEEEeeC-----CCcEEEEeCCCCC--ccc----EEEEEEcCCCCEEEEEeCC------CcEEEEecCC
Q psy10953 56 TLSIAYSTDGHWIASGAL-----DGIINIFDANTGH--SSW----VLSTAFTRDGKFFISASAD------HTVRVWNFAR 118 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~-----d~~v~i~d~~~~~--~~~----v~~~~~s~~~~~l~~~~~d------~~i~v~d~~~ 118 (181)
+..+.+||||++|+.+.. ...+++.|+.++. ... -..++|++|++.|+-...+ ..|+.+++.+
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt 208 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGT 208 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCC
Confidence 445789999998886532 2367888887664 111 1458999999865544332 3677788877
Q ss_pred C--ceeeeeec-CCcEE-EEEEccCCCEEEEEcC---CCcEEEEeC
Q psy10953 119 R--ENMHTFKH-ADQVW-CVCVAPDGDKFVSVGE---DKAVHMYSY 157 (181)
Q Consensus 119 ~--~~~~~~~~-~~~v~-~~~~sp~g~~l~~~~~---d~~v~i~~~ 157 (181)
+ +....+.. ....+ ....+.++++++..+. ++.+.+++.
T Consensus 209 ~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 209 PASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred ChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 6 33333332 12233 3444558887655443 357888884
No 429
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=92.33 E-value=7.1 Score=34.06 Aligned_cols=143 Identities=16% Similarity=0.298 Sum_probs=82.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceE------------EEEEECC--CCCEEEEeeC----------CCcE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFT------------LSIAYST--DGHWIASGAL----------DGII 77 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~------------~~~~~s~--d~~~l~~~~~----------d~~v 77 (181)
.+.+++.++.|+.+.-.|.++|+....+...+... ....-+| .+..++.|+. +|.|
T Consensus 259 ~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 259 CARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred cCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 34578888889999999999999886654322210 0111122 1334555532 5788
Q ss_pred EEEeCCCCCcccEE--------------------------EEEEcCCCCEEEEEe------------------CCCcEEE
Q psy10953 78 NIFDANTGHSSWVL--------------------------STAFTRDGKFFISAS------------------ADHTVRV 113 (181)
Q Consensus 78 ~i~d~~~~~~~~v~--------------------------~~~~s~~~~~l~~~~------------------~d~~i~v 113 (181)
+-+|+++++..+.. ..++++...++.... ..+.|.-
T Consensus 339 ~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvA 418 (764)
T TIGR03074 339 RAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVA 418 (764)
T ss_pred EEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEE
Confidence 88998776432211 123444333222211 1234555
Q ss_pred EecCCCceeeeeec-CCcEEE---------EEEcc-CCC---EEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 114 WNFARRENMHTFKH-ADQVWC---------VCVAP-DGD---KFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 114 ~d~~~~~~~~~~~~-~~~v~~---------~~~sp-~g~---~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
.|.++++....++. +..+|+ +.+.. +|+ .++.+..+|.+++.|..+|+.+-
T Consensus 419 LD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~ 483 (764)
T TIGR03074 419 LDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIV 483 (764)
T ss_pred EeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEe
Confidence 56777777666642 222222 22322 564 68888899999999999987764
No 430
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=91.91 E-value=1.9 Score=26.62 Aligned_cols=53 Identities=9% Similarity=0.044 Sum_probs=32.9
Q ss_pred EeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC-CCcEEEEeC
Q psy10953 105 ASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE-DKAVHMYSY 157 (181)
Q Consensus 105 ~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~~v~i~~~ 157 (181)
+..+|.+.-||+.+++.......-.-.++++++||+++++.+-. ..+|.-|-+
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~~~Ri~rywl 86 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETGRYRILRYWL 86 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGGGTEEEEEES
T ss_pred CCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEeccCceEEEEEE
Confidence 44567888999988875544443346789999999998765543 334444433
No 431
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=91.86 E-value=6.6 Score=32.67 Aligned_cols=140 Identities=13% Similarity=0.248 Sum_probs=81.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCce-EEEEEECC---CCCEEEEee------CCCcEEEEeCCCCCcccE--
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKF-TLSIAYST---DGHWIASGA------LDGIINIFDANTGHSSWV-- 90 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~---d~~~l~~~~------~d~~v~i~d~~~~~~~~v-- 90 (181)
+..++.++.|+.+.-+|.++|+.+-.+...... ...+.-+| ++. ++.+. .++.+.-+|+++++..+.
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCE-EEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 345677788999999999999987554321110 00111122 333 44433 257788888765432110
Q ss_pred --------------------------------------EEEEEcCCCCEEEEEeC-----CC-----------cEEEEec
Q psy10953 91 --------------------------------------LSTAFTRDGKFFISASA-----DH-----------TVRVWNF 116 (181)
Q Consensus 91 --------------------------------------~~~~~s~~~~~l~~~~~-----d~-----------~i~v~d~ 116 (181)
...+++|...++..+.- ++ .|.-.|+
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~ 278 (527)
T TIGR03075 199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP 278 (527)
T ss_pred CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence 02356665554443331 11 4666677
Q ss_pred CCCceeeeeec-CCcEE---------EEEEccCCC---EEEEEcCCCcEEEEeCCCCeeE
Q psy10953 117 ARRENMHTFKH-ADQVW---------CVCVAPDGD---KFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 117 ~~~~~~~~~~~-~~~v~---------~~~~sp~g~---~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
++++....++. +..+| -+.+..+|+ .++.+..+|.+++.|..+|+.+
T Consensus 279 ~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 279 DTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred ccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 88887766652 11222 222334776 6778889999999999999875
No 432
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=91.66 E-value=6.2 Score=31.91 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=67.2
Q ss_pred cCCCCEEEEE--eCC----CcEEEEeCCCCcEEEEEecC---CceEEEEEECCCCCEEEEeeC-----------------
Q psy10953 20 SPDDKYVLSG--SQS----GKINLYGVETGKLEQIFDTR---GKFTLSIAYSTDGHWIASGAL----------------- 73 (181)
Q Consensus 20 s~~g~~l~~~--~~d----~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~s~d~~~l~~~~~----------------- 73 (181)
-|+|+.++++ +.+ |-+.++|-++.++....... ..+.+.+-+.|..+.+++...
T Consensus 138 lp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~ 217 (461)
T PF05694_consen 138 LPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEA 217 (461)
T ss_dssp -SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHH
T ss_pred cCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhc
Confidence 4788887764 222 35778888877777665542 234556778888888877643
Q ss_pred ---CCcEEEEeCCCCCc----------ccEEEEEEcC--CCCEEEEEeC-CCcEEEEec-CCC----ceeeeeec-----
Q psy10953 74 ---DGIINIFDANTGHS----------SWVLSTAFTR--DGKFFISASA-DHTVRVWNF-ARR----ENMHTFKH----- 127 (181)
Q Consensus 74 ---d~~v~i~d~~~~~~----------~~v~~~~~s~--~~~~l~~~~~-d~~i~v~d~-~~~----~~~~~~~~----- 127 (181)
-.++.+||..+... ..+..+.|.. +..+-+++++ ..+|-.|-- ..+ +.+.++..
T Consensus 218 ~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~ 297 (461)
T PF05694_consen 218 GKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG 297 (461)
T ss_dssp H-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred ccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence 35899999875321 2244555554 4445444443 444444422 222 12222221
Q ss_pred -------------CCcEEEEEEccCCCEEEEEc-CCCcEEEEeCCC
Q psy10953 128 -------------ADQVWCVCVAPDGDKFVSVG-EDKAVHMYSYKP 159 (181)
Q Consensus 128 -------------~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~~~ 159 (181)
+.-|+.+.+|.|.++|+... .+|.|+.||+..
T Consensus 298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp S---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred ccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 23368899999999998777 589999999854
No 433
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=91.54 E-value=8 Score=33.30 Aligned_cols=70 Identities=6% Similarity=0.160 Sum_probs=47.2
Q ss_pred EEEEEEcC--CCCEEEEEeCCCcEEEEecCC-------C-------------ceeeeeecCCcEEEEEEc--cCCCEEEE
Q psy10953 90 VLSTAFTR--DGKFFISASADHTVRVWNFAR-------R-------------ENMHTFKHADQVWCVCVA--PDGDKFVS 145 (181)
Q Consensus 90 v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~-------~-------------~~~~~~~~~~~v~~~~~s--p~g~~l~~ 145 (181)
|+.+.... +.+.|+.|..||.|.+|...+ . ++...+......|+++++ ...++||+
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 44444333 345788888999999996521 0 012223345679999999 77888888
Q ss_pred EcCCCcEEEEeCCC
Q psy10953 146 VGEDKAVHMYSYKP 159 (181)
Q Consensus 146 ~~~d~~v~i~~~~~ 159 (181)
++....|.+|.+..
T Consensus 183 SsNs~~VTVFaf~l 196 (717)
T PF08728_consen 183 SSNSQEVTVFAFAL 196 (717)
T ss_pred ecCCceEEEEEEec
Confidence 77777888887754
No 434
>KOG3630|consensus
Probab=90.90 E-value=3 Score=37.46 Aligned_cols=132 Identities=12% Similarity=0.043 Sum_probs=78.7
Q ss_pred EEEEcCCCCEEE--EEeCCCcEEEEeCCCCcEEE-----EEe------cCCceEEEEEECCCC-CEEEEeeCCCcEEEEe
Q psy10953 16 NVVFSPDDKYVL--SGSQSGKINLYGVETGKLEQ-----IFD------TRGKFTLSIAYSTDG-HWIASGALDGIINIFD 81 (181)
Q Consensus 16 ~~~~s~~g~~l~--~~~~d~~i~~~d~~~~~~~~-----~~~------~~~~~~~~~~~s~d~-~~l~~~~~d~~v~i~d 81 (181)
.+...+|+...+ ..+.+-.|..||++.-.... .+. ....+..++.|.|.= ...+....|+.+.+..
T Consensus 105 ~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~ 184 (1405)
T KOG3630|consen 105 IFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKS 184 (1405)
T ss_pred EEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhh
Confidence 344456766543 34445578889986432211 111 113344567777743 2234455676666665
Q ss_pred CCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC--ceeeeee--cCCcEEEEEEccCCCEEEEEc
Q psy10953 82 ANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR--ENMHTFK--HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 82 ~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~--~~~~v~~~~~sp~g~~l~~~~ 147 (181)
+.. .-...++++.|+|.|+.++.|-..|++.-|-.... ..+..-+ ....|.+++|-....++++-+
T Consensus 185 ~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 185 TKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVVYG 262 (1405)
T ss_pred hhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEEEec
Confidence 431 12345789999999999999999999998865432 1111111 235788999887777776654
No 435
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.83 E-value=0.84 Score=37.87 Aligned_cols=35 Identities=31% Similarity=0.605 Sum_probs=24.1
Q ss_pred EEEEEEcC----CCCEEEEEeCCCcEEEEecCCCceeee
Q psy10953 90 VLSTAFTR----DGKFFISASADHTVRVWNFARRENMHT 124 (181)
Q Consensus 90 v~~~~~s~----~~~~l~~~~~d~~i~v~d~~~~~~~~~ 124 (181)
+...++++ +..++++.+.|+.+|+||+.++..+.+
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 44455555 556888888888899998888877444
No 436
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=90.62 E-value=9.1 Score=33.18 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=48.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCC----------C--ceeee-e---------ecCCcEEEEEEccC---CCEE
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFAR----------R--ENMHT-F---------KHADQVWCVCVAPD---GDKF 143 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~----------~--~~~~~-~---------~~~~~v~~~~~sp~---g~~l 143 (181)
.|..+.++|+|++++-.+..+ |.|..+.. + ...+. + .....|..+.|+|. +..|
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 477889999999998888765 44444421 1 11221 1 12236778999997 4788
Q ss_pred EEEcCCCcEEEEeCCC
Q psy10953 144 VSVGEDKAVHMYSYKP 159 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~ 159 (181)
++-..|+.+++||+..
T Consensus 165 ~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 165 VVLTSDNTLRLYDISD 180 (717)
T ss_pred EEEecCCEEEEEecCC
Confidence 8888899999999864
No 437
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=90.61 E-value=1 Score=21.09 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=19.8
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 130 QVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
.+.+++++++|+.+++=+.++.|+++
T Consensus 3 ~P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 3 YPHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp SEEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CCcEEEEeCCCCEEEEECCCCEEEEC
Confidence 35678888888888877777777764
No 438
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.60 E-value=5.2 Score=29.12 Aligned_cols=115 Identities=12% Similarity=0.122 Sum_probs=68.1
Q ss_pred eCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEc------------C
Q psy10953 30 SQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFT------------R 97 (181)
Q Consensus 30 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s------------~ 97 (181)
-.++....+|.++-+.+..+...+. .+.+..|++.|..++...++..-|.++........+++. -
T Consensus 108 w~egvaf~~d~~t~~~lg~~~y~Ge---GWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V 184 (262)
T COG3823 108 WKEGVAFKYDADTLEELGRFSYEGE---GWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV 184 (262)
T ss_pred eccceeEEEChHHhhhhcccccCCc---ceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee
Confidence 3566777777776666665555444 344556777777776666677667654322111111111 2
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeeee-------------cCCcEEEEEEccCCCEEEEEc
Q psy10953 98 DGKFFISASADHTVRVWNFARRENMHTFK-------------HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 98 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------------~~~~v~~~~~sp~g~~l~~~~ 147 (181)
+|..++-...+..|...+..+++...-+. +.+..+++|+.|++.+|...+
T Consensus 185 dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 185 DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 56667777777777777777776544332 233567899999886555444
No 439
>KOG4460|consensus
Probab=90.58 E-value=6.7 Score=32.51 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=44.6
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEe---------CCCCcEE----------EEEecCC-ceEEEEEECCCC---CEE
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYG---------VETGKLE----------QIFDTRG-KFTLSIAYSTDG---HWI 68 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d---------~~~~~~~----------~~~~~~~-~~~~~~~~s~d~---~~l 68 (181)
..|..+..++.|..++-++-+|.+.++= +++|+.. +.|.... -....++|+|+. .+|
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 3477888999999999999898777653 1223211 0111111 112356777764 456
Q ss_pred EEeeCCCcEEEEeCCCC
Q psy10953 69 ASGALDGIINIFDANTG 85 (181)
Q Consensus 69 ~~~~~d~~v~i~d~~~~ 85 (181)
+.-.+|+.+++||+...
T Consensus 184 ~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSEP 200 (741)
T ss_pred EEEecCcEEEEEecCCc
Confidence 66677777777777543
No 440
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=90.42 E-value=7 Score=30.35 Aligned_cols=64 Identities=17% Similarity=0.255 Sum_probs=41.1
Q ss_pred EEEEEEcC-------CCCEEEEEeCCCcEEEEecCCCceeeee----e-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 90 VLSTAFTR-------DGKFFISASADHTVRVWNFARRENMHTF----K-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 90 v~~~~~s~-------~~~~l~~~~~d~~i~v~d~~~~~~~~~~----~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
+..+.|.+ .|+++++.-..+.|....+.....+... . ...++..+++.|||..+++-..++.|+
T Consensus 255 p~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 255 PTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 44555553 3556666666778888888654333221 1 334789999999999999888888775
No 441
>KOG1916|consensus
Probab=90.37 E-value=0.36 Score=41.95 Aligned_cols=69 Identities=17% Similarity=0.288 Sum_probs=44.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-----------eEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-----------FTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
|.-+-|-++.-++-.+-.++++++....+... ..+..|+. +..--.+||||..|+.+..||.+..|-+
T Consensus 186 V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 186 VSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred eeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 34444455666777777788888776543221 22222322 2223357999999999999999998875
Q ss_pred C
Q psy10953 83 N 83 (181)
Q Consensus 83 ~ 83 (181)
.
T Consensus 265 y 265 (1283)
T KOG1916|consen 265 Y 265 (1283)
T ss_pred e
Confidence 3
No 442
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.12 E-value=1.2 Score=36.90 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=29.0
Q ss_pred EEEEEEcC----CCCEEEEEeCCCcEEEEeCCCCcEEEEEe
Q psy10953 14 MWNVVFSP----DDKYVLSGSQSGKINLYGVETGKLEQIFD 50 (181)
Q Consensus 14 ~~~~~~s~----~g~~l~~~~~d~~i~~~d~~~~~~~~~~~ 50 (181)
...+++++ +..++++.+.|+++|+||+.+++++....
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 45566666 77899999999999999999999966543
No 443
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=89.85 E-value=3.2 Score=25.63 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=18.8
Q ss_pred CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE
Q psy10953 32 SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS 70 (181)
Q Consensus 32 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~ 70 (181)
+|.+.-||..+++...++..-. +...+++++|+..++.
T Consensus 36 ~GRll~ydp~t~~~~vl~~~L~-fpNGVals~d~~~vlv 73 (89)
T PF03088_consen 36 TGRLLRYDPSTKETTVLLDGLY-FPNGVALSPDESFVLV 73 (89)
T ss_dssp -EEEEEEETTTTEEEEEEEEES-SEEEEEE-TTSSEEEE
T ss_pred CcCEEEEECCCCeEEEehhCCC-ccCeEEEcCCCCEEEE
Confidence 3456666666665544443322 2346666666664443
No 444
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=88.87 E-value=15 Score=32.10 Aligned_cols=130 Identities=15% Similarity=0.124 Sum_probs=67.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCccc-EEEEEEcCCCCE
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSW-VLSTAFTRDGKF 101 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~-v~~~~~s~~~~~ 101 (181)
+..++.++.++.|.-.|.++|+.+-.+.......... . ...+. -+.+|+...+.... +.. +=...+..
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~------~---~~~cR-Gvay~~~p~~~~~~~~~~-~p~~~~~r 262 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGR------Q---HQTCR-GVSYYDAPAAAAGPAAPA-APADCARR 262 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccc------c---ccccc-ceEEecCCcccccccccc-cccccCCE
Confidence 4566677778889999999998766554432211000 0 01112 23335432111000 000 00123445
Q ss_pred EEEEeCCCcEEEEecCCCceeeeeecCCcEE-------------EEEEcc--CCCEEEEEcC----------CCcEEEEe
Q psy10953 102 FISASADHTVRVWNFARRENMHTFKHADQVW-------------CVCVAP--DGDKFVSVGE----------DKAVHMYS 156 (181)
Q Consensus 102 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-------------~~~~sp--~g~~l~~~~~----------d~~v~i~~ 156 (181)
++.++.|+.+.-.|.++++....+...+.+. ...-+| .+..++.++. ++.|+-+|
T Consensus 263 V~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~D 342 (764)
T TIGR03074 263 IILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFD 342 (764)
T ss_pred EEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEE
Confidence 6667778888888888887776554322220 001111 1345555542 57789999
Q ss_pred CCCCeeE
Q psy10953 157 YKPEEEV 163 (181)
Q Consensus 157 ~~~~~~~ 163 (181)
..+|+++
T Consensus 343 a~TGkl~ 349 (764)
T TIGR03074 343 VNTGALV 349 (764)
T ss_pred CCCCcEe
Confidence 9888765
No 445
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=88.76 E-value=8 Score=28.72 Aligned_cols=126 Identities=21% Similarity=0.356 Sum_probs=73.5
Q ss_pred EEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-C--CcEEEEeCCC--CCcccE------------EEEEEcC
Q psy10953 35 INLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-D--GIINIFDANT--GHSSWV------------LSTAFTR 97 (181)
Q Consensus 35 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d--~~v~i~d~~~--~~~~~v------------~~~~~s~ 97 (181)
-.+||+.+++....-.....+..+-.+-+||+++.+|+. + ..+++++... ....+. -.+..-|
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 558999998876654333444444567789999998754 2 4677887654 111111 1234567
Q ss_pred CCCEEEEEeCCCc-EEEEecCCC-ceeeeee---------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 98 DGKFFISASADHT-VRVWNFARR-ENMHTFK---------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 98 ~~~~l~~~~~d~~-i~v~d~~~~-~~~~~~~---------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
||+.++.|+.... ..+|+-... .....+. ...-...+-+.|+|+.|+.+..+ -.|||......
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v 201 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTV 201 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeE
Confidence 8998888887643 445543221 1111111 01112256778999999888754 45667766544
No 446
>KOG4499|consensus
Probab=88.58 E-value=5 Score=29.76 Aligned_cols=49 Identities=10% Similarity=0.095 Sum_probs=40.2
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST 63 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 63 (181)
-.+++..+|++.++.-.-++|..+|..+|+.+..+......+.+++|.-
T Consensus 215 DGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 215 DGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 3456677888888888889999999999999988877777788888854
No 447
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=88.36 E-value=10 Score=29.38 Aligned_cols=58 Identities=19% Similarity=0.342 Sum_probs=40.3
Q ss_pred eEEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCcEEEEEec---------------CCceEEEEEECCCCCEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS------GKINLYGVETGKLEQIFDT---------------RGKFTLSIAYSTDGHWIASG 71 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d------~~i~~~d~~~~~~~~~~~~---------------~~~~~~~~~~s~d~~~l~~~ 71 (181)
+.=+|++.++|.++++.-.+ ..|..++.. |+....+.. .+.-..+++++|||+.|+++
T Consensus 86 D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~ 164 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA 164 (326)
T ss_pred ChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence 33467888899988888778 889888876 665443321 12234689999999966654
No 448
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=87.74 E-value=3.2 Score=30.06 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=38.0
Q ss_pred CEEEEEeCCCcEEEEecCC--CceeeeeecCCcEEEEEEccCCCEEEEEcCC
Q psy10953 100 KFFISASADHTVRVWNFAR--RENMHTFKHADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 100 ~~l~~~~~d~~i~v~d~~~--~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
+.|+.+...+.|.+|++.. -..+..+.--+.|..+..+..|+++++--.+
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k 80 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEK 80 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEee
Confidence 4554556678899999873 3456667666889999999999999997643
No 449
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=87.31 E-value=7.2 Score=27.14 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=23.9
Q ss_pred cEEEEEEccCC------CEEEEEcCCCcEEEEeCC
Q psy10953 130 QVWCVCVAPDG------DKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 130 ~v~~~~~sp~g------~~l~~~~~d~~v~i~~~~ 158 (181)
.+..++|||.| -.|++...++.|.+|.-.
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 68899999954 367888889999999976
No 450
>PHA02790 Kelch-like protein; Provisional
Probab=86.89 E-value=16 Score=30.01 Aligned_cols=98 Identities=7% Similarity=-0.028 Sum_probs=50.2
Q ss_pred CCCCEEEEEeCCC-----cEEEEeCCCCcEEEEEecCCceE-EEEEECCCCCEEEEeeCC--CcEEEEeCCCCC------
Q psy10953 21 PDDKYVLSGSQSG-----KINLYGVETGKLEQIFDTRGKFT-LSIAYSTDGHWIASGALD--GIINIFDANTGH------ 86 (181)
Q Consensus 21 ~~g~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~-~~~~~s~d~~~l~~~~~d--~~v~i~d~~~~~------ 86 (181)
.++..+++|+.++ ++..||..+++....-....... .++. ..+++..+.|+.+ ..+..||..+..
T Consensus 270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 3555667777543 46678877765443222111111 1121 2366766777753 357778865321
Q ss_pred --cccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCC
Q psy10953 87 --SSWVLSTAFTRDGKFFISASADH---TVRVWNFARR 119 (181)
Q Consensus 87 --~~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~~ 119 (181)
..........-+|+..+.|+.++ .+..||..+.
T Consensus 349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCC
Confidence 00111122234677777777543 4667777653
No 451
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=86.84 E-value=15 Score=29.68 Aligned_cols=135 Identities=14% Similarity=0.232 Sum_probs=73.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEE---EEEec-CCceEEEEEECC-----CCCEEEEeeCCCcEEEEeCCC--CC---c
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLE---QIFDT-RGKFTLSIAYST-----DGHWIASGALDGIINIFDANT--GH---S 87 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~---~~~~~-~~~~~~~~~~s~-----d~~~l~~~~~d~~v~i~d~~~--~~---~ 87 (181)
+...+++|+..|.+++|+-..+... .++.. -+.++..+...+ +...||. -.-+++.+|.+.. ++ .
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccC
Confidence 3457899999999999987543321 12221 233455554432 2233443 3344666666521 11 0
Q ss_pred --------------ccEEEEEEcC----C-CCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 88 --------------SWVLSTAFTR----D-GKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 88 --------------~~v~~~~~s~----~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
.....+..-| . ..++..-+.||.+.+|+-....-.+.++.---.--+++.|.-..|++++.
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecC
Confidence 0111122222 2 24677778899999998655332222221111223466777778888888
Q ss_pred CCcEEEEeC
Q psy10953 149 DKAVHMYSY 157 (181)
Q Consensus 149 d~~v~i~~~ 157 (181)
+..+..|.+
T Consensus 195 s~~l~~Yky 203 (418)
T PF14727_consen 195 SWTLECYKY 203 (418)
T ss_pred ceeEEEecH
Confidence 888888876
No 452
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=86.30 E-value=14 Score=28.67 Aligned_cols=57 Identities=23% Similarity=0.427 Sum_probs=36.0
Q ss_pred EEEEEcCCCCEEEEEeCC------CcEEEEecCCCceeeee----------------ecCCcEEEEEEccCCCEEEEEcC
Q psy10953 91 LSTAFTRDGKFFISASAD------HTVRVWNFARRENMHTF----------------KHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 91 ~~~~~s~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~----------------~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
-++++.++|.++++.-.+ ..|+-++.. +.....+ ......-+++++|+|+.|+++.+
T Consensus 88 Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 88 EGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred hHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEEC
Confidence 345566777777776666 677777754 3322221 12335778999999997776653
No 453
>KOG1520|consensus
Probab=85.60 E-value=16 Score=28.90 Aligned_cols=51 Identities=8% Similarity=0.059 Sum_probs=27.5
Q ss_pred CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC-CcEEEEeC
Q psy10953 107 ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED-KAVHMYSY 157 (181)
Q Consensus 107 ~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~~v~i~~~ 157 (181)
.+|.+.-||..+...-.....-.-.+++++|||+.+++.+-.- .+++-|-+
T Consensus 197 ~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi 248 (376)
T KOG1520|consen 197 PTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAETTTARIKRYWI 248 (376)
T ss_pred CccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEeeccceeeeeEe
Confidence 3455555555443322122222345789999999998766532 34444444
No 454
>KOG3616|consensus
Probab=84.64 E-value=3.1 Score=35.98 Aligned_cols=65 Identities=15% Similarity=0.271 Sum_probs=35.7
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 88 SWVLSTAFTRDGKFFISASADHTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 88 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
..+.+++-+|.|+.++.+..|+.|.+|++-... .+++.. .+...+.|...| +++...|+++.-|.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~--~p~~nlv~tnhg--l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEA--KPKENLVFTNHG--LVTATSDRRALAWK 81 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhc--CCccceeeeccc--eEEEeccchhheee
Confidence 345666667778888888888888887764332 233322 223334444333 44444454444444
No 455
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=84.61 E-value=14 Score=31.93 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=63.5
Q ss_pred CCEEEEeeCCCcEEEEeCCC------------CC---------------cccEEEEEEc--CCCCEEEEEeCCCcEEEEe
Q psy10953 65 GHWIASGALDGIINIFDANT------------GH---------------SSWVLSTAFT--RDGKFFISASADHTVRVWN 115 (181)
Q Consensus 65 ~~~l~~~~~d~~v~i~d~~~------------~~---------------~~~v~~~~~s--~~~~~l~~~~~d~~i~v~d 115 (181)
...|+.+..||.|.+|..+. .+ .....++++. ...+++|.++....|.||-
T Consensus 114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa 193 (717)
T PF08728_consen 114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFA 193 (717)
T ss_pred eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence 35677888999999996420 00 1235667777 7778888888888888886
Q ss_pred cCCC--cee--eeeecCCcEEEEEEccCC---C---EEEEEcCCCcEEEEeC
Q psy10953 116 FARR--ENM--HTFKHADQVWCVCVAPDG---D---KFVSVGEDKAVHMYSY 157 (181)
Q Consensus 116 ~~~~--~~~--~~~~~~~~v~~~~~sp~g---~---~l~~~~~d~~v~i~~~ 157 (181)
+... +.. ....+...|.+++|-++. . .+++++..|.+-+|++
T Consensus 194 f~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 194 FALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 6542 111 122345568888887653 2 7788888999988877
No 456
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=84.15 E-value=7.5 Score=23.84 Aligned_cols=49 Identities=10% Similarity=0.139 Sum_probs=31.2
Q ss_pred CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC-CCcEEEEeCCC
Q psy10953 109 HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE-DKAVHMYSYKP 159 (181)
Q Consensus 109 ~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~~v~i~~~~~ 159 (181)
+.|..||..+-+. ....-...+++.++|++++++.++. .+.|++|....
T Consensus 36 ~~Vvyyd~~~~~~--va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 36 GNVVYYDGKEVKV--VASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred ceEEEEeCCEeEE--eeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 4566666533211 1112234678899999999877775 67999988653
No 457
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=83.95 E-value=14 Score=26.85 Aligned_cols=125 Identities=14% Similarity=0.296 Sum_probs=63.8
Q ss_pred CEEEEEeCCCcEEEEeCCC--CcEEEEEecCCceEEEEEECCCCCEEEEeeCCC------cEEEE---eCCCCCcccEEE
Q psy10953 24 KYVLSGSQSGKINLYGVET--GKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG------IINIF---DANTGHSSWVLS 92 (181)
Q Consensus 24 ~~l~~~~~d~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~------~v~i~---d~~~~~~~~v~~ 92 (181)
..|+.+....+|.+|++.+ .+....|.+-+. +..+.++..|.++++--.+. .+++| ........++..
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~-V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGR-VLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhh-eeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 4444445567899999883 344455655444 56899999999999863322 33443 222222222221
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 93 TAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
..- |. -++.+..+.. ...-.+..++....+.+++.=|-...|+.|+ ++.+.+|.++.
T Consensus 108 -Ria--G~-~v~~~~~~~~-----~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~ 164 (215)
T PF14761_consen 108 -RIA--GH-RVTPSFNESS-----KDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKY 164 (215)
T ss_pred -EEc--cc-ccccCCCCcc-----ccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEE
Confidence 000 10 0111111111 1122344455555566665555444444455 46888888754
No 458
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=83.95 E-value=3.4 Score=19.66 Aligned_cols=23 Identities=26% Similarity=0.374 Sum_probs=19.0
Q ss_pred EEEEEeCCCcEEEEeCCCCcEEE
Q psy10953 25 YVLSGSQSGKINLYGVETGKLEQ 47 (181)
Q Consensus 25 ~l~~~~~d~~i~~~d~~~~~~~~ 47 (181)
.+++++.++.+..+|.++|+..-
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W 30 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILW 30 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEE
Confidence 57778889999999998888654
No 459
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=83.79 E-value=4.2 Score=33.58 Aligned_cols=61 Identities=18% Similarity=0.296 Sum_probs=45.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
...++|+|+..|-|++||--..+-...+..-+..+..+..+.+|+++++... ..+-+-|+.
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 4568999999999999997655555556666788888889999998775543 356666664
No 460
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=83.64 E-value=16 Score=27.19 Aligned_cols=108 Identities=16% Similarity=0.266 Sum_probs=59.8
Q ss_pred EEEcCCCCEEEEEeCC---CcEEEEeCCC-CcEEEEEec-----CCceEEEEEECCCCCEEEEeeCCCc-EEEEeCCCCC
Q psy10953 17 VVFSPDDKYVLSGSQS---GKINLYGVET-GKLEQIFDT-----RGKFTLSIAYSTDGHWIASGALDGI-INIFDANTGH 86 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d---~~i~~~d~~~-~~~~~~~~~-----~~~~~~~~~~s~d~~~l~~~~~d~~-v~i~d~~~~~ 86 (181)
=++-|||+++.+|+.- ..+++++-.+ ...-.+... .+.+=-+...-+||+.|+.|+...- .-+|......
T Consensus 72 g~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~ 151 (243)
T PF07250_consen 72 GAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPG 151 (243)
T ss_pred cCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccCC
Confidence 3466899999888752 3578887543 111011111 1111114555679999998877643 3344332110
Q ss_pred cccE-----------------EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee
Q psy10953 87 SSWV-----------------LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK 126 (181)
Q Consensus 87 ~~~v-----------------~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 126 (181)
...+ -.+...|+|++++.+..+ -.+||..+.+.+..++
T Consensus 152 ~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 152 PGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVRTLP 206 (243)
T ss_pred CCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEeeCC
Confidence 0000 124678999988877754 5566887776555553
No 461
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=82.06 E-value=6.3 Score=21.95 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=22.7
Q ss_pred cEEEEEEccCCCEEEEEcC-----CCcEEEEeCCCCe
Q psy10953 130 QVWCVCVAPDGDKFVSVGE-----DKAVHMYSYKPEE 161 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~-----d~~v~i~~~~~~~ 161 (181)
..+++++.|||+.+++|.. +....+.++.+..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~~~~~~~~~~~l~Rln~DG 38 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYVDNSSGNNDFVLARLNADG 38 (55)
T ss_pred ceEEEEECCCCcEEEEEEeecCCCcccEEEEEECCCC
Confidence 4678899999999998853 3355666665543
No 462
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=82.03 E-value=25 Score=30.86 Aligned_cols=30 Identities=3% Similarity=0.163 Sum_probs=17.7
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 132 WCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
..++|.++-+.|+.+. ...+.++++.+...
T Consensus 207 ~rI~W~~~~~~lLv~~-r~~l~~~d~~~~~~ 236 (765)
T PF10214_consen 207 KRILWVSDSNRLLVCN-RSKLMLIDFESNWQ 236 (765)
T ss_pred eeeEecCCCCEEEEEc-CCceEEEECCCCCc
Confidence 3566666666666555 34666777765544
No 463
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=81.50 E-value=25 Score=28.02 Aligned_cols=135 Identities=17% Similarity=0.292 Sum_probs=80.1
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCce-----EEEEEECCCCCE--EEEee-CC---CcEEEEeCC--CC--
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKF-----TLSIAYSTDGHW--IASGA-LD---GIINIFDAN--TG-- 85 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~s~d~~~--l~~~~-~d---~~v~i~d~~--~~-- 85 (181)
|...+++....++-+.+||++. +.++.+.. +.. ...+.+ .|+. |+.++ .+ ..+++|.+. ++
T Consensus 66 p~kSlIigTdK~~GL~VYdL~G-k~lq~~~~-Gr~NNVDvrygf~l--~g~~vDlavas~R~~g~n~l~~f~id~~~g~L 141 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDG-KELQSLPV-GRPNNVDVRYGFPL--NGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL 141 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS--EEEEE-S-S-EEEEEEEEEEEE--TTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred cccceEEEEeCCCCEEEEcCCC-cEEEeecC-CCcceeeeecceec--CCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence 5667888888888999999984 44454432 221 122333 3443 33333 32 468888653 11
Q ss_pred -------C-----cccEEEEEE--cC-CCC-EEEEEeCCCcEEEEecC---CC----ceeeeeecCCcEEEEEEccCCCE
Q psy10953 86 -------H-----SSWVLSTAF--TR-DGK-FFISASADHTVRVWNFA---RR----ENMHTFKHADQVWCVCVAPDGDK 142 (181)
Q Consensus 86 -------~-----~~~v~~~~~--s~-~~~-~l~~~~~d~~i~v~d~~---~~----~~~~~~~~~~~v~~~~~sp~g~~ 142 (181)
+ ...+..+++ +| +|+ +.+....+|.+.-|-+. .+ +.++.+.....+..++......+
T Consensus 142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~ 221 (381)
T PF02333_consen 142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR 221 (381)
T ss_dssp EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence 0 012455554 33 455 55667788988877664 22 35667777778999999998889
Q ss_pred EEEEcCCCcEEEEeCCC
Q psy10953 143 FVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~ 159 (181)
|+.+-++..|--|+..+
T Consensus 222 LYvgEE~~GIW~y~Aep 238 (381)
T PF02333_consen 222 LYVGEEDVGIWRYDAEP 238 (381)
T ss_dssp EEEEETTTEEEEEESSC
T ss_pred EEEecCccEEEEEecCC
Confidence 99999988787777764
No 464
>PRK13684 Ycf48-like protein; Provisional
Probab=81.21 E-value=24 Score=27.49 Aligned_cols=96 Identities=16% Similarity=0.228 Sum_probs=52.5
Q ss_pred eEEEEEECCCCCEEEEeeCCCcEEE-EeC--------CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee
Q psy10953 55 FTLSIAYSTDGHWIASGALDGIINI-FDA--------NTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF 125 (181)
Q Consensus 55 ~~~~~~~s~d~~~l~~~~~d~~v~i-~d~--------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 125 (181)
.+..+.+.+++.+++++. .|.+.. +|. .......+..+.+.++++.++.+. .|.+++=....+..-...
T Consensus 174 ~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW~~~ 251 (334)
T PRK13684 174 VVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESWSKP 251 (334)
T ss_pred eEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEEEEccCCCCCccccc
Confidence 345778888876665443 444332 221 122334678888999998776654 566543222222211111
Q ss_pred e-----cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 126 K-----HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 126 ~-----~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
. ....+..+++.|+++.++ ++.++.+.
T Consensus 252 ~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~ 283 (334)
T PRK13684 252 IIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL 283 (334)
T ss_pred cCCccccccceeeEEEcCCCCEEE-EcCCCeEE
Confidence 1 123477889999877555 44555554
No 465
>KOG2280|consensus
Probab=80.92 E-value=37 Score=29.55 Aligned_cols=64 Identities=14% Similarity=0.266 Sum_probs=41.2
Q ss_pred EEEcCCCCEEEEEeCC----------CcEEEEeCCCCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 17 VVFSPDDKYVLSGSQS----------GKINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d----------~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
++-.|-|.-+|..=++ -.|++|++. |+++..+.. ++. ...+.|+.+.. |++...+|++++|+..
T Consensus 38 fa~Ap~gGpIAV~r~p~~~~~~~~a~~~I~If~~s-G~lL~~~~w~~~~-lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 38 FACAPFGGPIAVTRSPSKLVPLYSARPYIRIFNIS-GQLLGRILWKHGE-LIGMGWSDDEE-LICVQKDGTVHVYGLL 112 (829)
T ss_pred EEecccCCceEEEecccccccccccceeEEEEecc-ccchHHHHhcCCC-eeeecccCCce-EEEEeccceEEEeecc
Confidence 4445666666655444 247777764 555443332 344 45899998766 6667889999999974
No 466
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=80.22 E-value=25 Score=27.19 Aligned_cols=32 Identities=19% Similarity=0.538 Sum_probs=26.6
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE 41 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~ 41 (181)
....-|.|+|+|.+.+-++....++..+||..
T Consensus 21 ~L~N~WGia~~p~~~~WVadngT~~~TlYdg~ 52 (336)
T TIGR03118 21 GLRNAWGLSYRPGGPFWVANTGTGTATLYVGN 52 (336)
T ss_pred cccccceeEecCCCCEEEecCCcceEEeecCC
Confidence 44557999999999877777788899999986
No 467
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=79.97 E-value=5.9 Score=19.82 Aligned_cols=28 Identities=29% Similarity=0.370 Sum_probs=22.5
Q ss_pred EEEEEeCCCcEEEEeCCCCcEEEEEecC
Q psy10953 25 YVLSGSQSGKINLYGVETGKLEQIFDTR 52 (181)
Q Consensus 25 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 52 (181)
.+..++.++.+.-.|.++|+.+-.++..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 3556689999999999999988766543
No 468
>KOG2377|consensus
Probab=79.94 E-value=21 Score=29.24 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=0.0
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 91 LSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 91 ~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
+.+-|+..++ .+++-+..-+=.+-.........++. ..++|.++.||||.+.+++--.++.|.+++..+.+.
T Consensus 26 ngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~ 100 (657)
T KOG2377|consen 26 NGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNS 100 (657)
T ss_pred cceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCch
No 469
>KOG4460|consensus
Probab=79.39 E-value=36 Score=28.50 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=21.7
Q ss_pred EEEEEEccCC---CEEEEEcCCCcEEEEeCCCC
Q psy10953 131 VWCVCVAPDG---DKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 131 v~~~~~sp~g---~~l~~~~~d~~v~i~~~~~~ 160 (181)
+.-++|+|+. ..+..-+.|+.+++|+....
T Consensus 168 l~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 168 LKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP 200 (741)
T ss_pred eeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence 4456777764 46677778999999997543
No 470
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=79.34 E-value=27 Score=27.03 Aligned_cols=40 Identities=8% Similarity=0.005 Sum_probs=19.6
Q ss_pred CcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeC
Q psy10953 33 GKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGAL 73 (181)
Q Consensus 33 ~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~ 73 (181)
..+..||..+++-...-.... .....+ ...+++..+.|+.
T Consensus 168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~-~~~~~~iyv~GG~ 209 (346)
T TIGR03547 168 KNVLSYDPSTNQWRNLGENPFLGTAGSAI-VHKGNKLLLINGE 209 (346)
T ss_pred ceEEEEECCCCceeECccCCCCcCCCceE-EEECCEEEEEeee
Confidence 357788887766543221111 111122 2235676677664
No 471
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=79.10 E-value=27 Score=26.82 Aligned_cols=97 Identities=11% Similarity=0.164 Sum_probs=47.5
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCcEE---EEEec-CCc-eEEEEEECCCCCEEEEeeC-----CCcEEEEeCCCCC
Q psy10953 22 DDKYVLSGSQSG-----KINLYGVETGKLE---QIFDT-RGK-FTLSIAYSTDGHWIASGAL-----DGIINIFDANTGH 86 (181)
Q Consensus 22 ~g~~l~~~~~d~-----~i~~~d~~~~~~~---~~~~~-~~~-~~~~~~~s~d~~~l~~~~~-----d~~v~i~d~~~~~ 86 (181)
++++++.|+.++ .+..+|+.+.+.. ..+.. ... ...+++. -+++..+.|+. ...+..||+.+..
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 566667776542 4666777665531 11111 111 0011222 24566666654 2457788876421
Q ss_pred ---------cccEEEEEEcCCCCEEEEEeCCC----cEEEEecCCC
Q psy10953 87 ---------SSWVLSTAFTRDGKFFISASADH----TVRVWNFARR 119 (181)
Q Consensus 87 ---------~~~v~~~~~s~~~~~l~~~~~d~----~i~v~d~~~~ 119 (181)
...........+++.++.|+.++ .+..||+.+.
T Consensus 151 W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~ 196 (323)
T TIGR03548 151 WFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKN 196 (323)
T ss_pred eeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCC
Confidence 01111222334567777777653 3567787654
No 472
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=78.06 E-value=29 Score=26.63 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=33.3
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCC-ceEEEEEECCCCCEEEEeeCCC----cEEEEeCCC
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRG-KFTLSIAYSTDGHWIASGALDG----IINIFDANT 84 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~----~v~i~d~~~ 84 (181)
++++.+.|+.. ..+..||..+.+-...-.... ..........+++..+.|+.++ .+..||+.+
T Consensus 123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~ 195 (323)
T TIGR03548 123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKK 195 (323)
T ss_pred CCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCC
Confidence 56666666642 357788887776544321111 1111122233567777777653 345778754
No 473
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=76.84 E-value=16 Score=32.31 Aligned_cols=51 Identities=16% Similarity=0.259 Sum_probs=34.3
Q ss_pred CcEEEEeCCCCcEEEE-EecCCceEEEEEECCCCCEEEE-eeCCC-----cEEEEeCCC
Q psy10953 33 GKINLYGVETGKLEQI-FDTRGKFTLSIAYSTDGHWIAS-GALDG-----IINIFDANT 84 (181)
Q Consensus 33 ~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~s~d~~~l~~-~~~d~-----~v~i~d~~~ 84 (181)
+.|.+-|........+ +. ....+....|||||+.|+. .+..+ .|++.|+.+
T Consensus 329 ~~L~~~D~dG~n~~~ve~~-~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIE-DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred CeEEEEecCCCCceEEEec-CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 4677777765555444 33 3445678899999999988 44443 577778764
No 474
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=76.81 E-value=52 Score=28.92 Aligned_cols=107 Identities=13% Similarity=0.219 Sum_probs=64.8
Q ss_pred CeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcE-----EEEE-ecCCc---------eEEEEEECCCCCEEEEeeC
Q psy10953 10 GPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKL-----EQIF-DTRGK---------FTLSIAYSTDGHWIASGAL 73 (181)
Q Consensus 10 ~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~-----~~~~-~~~~~---------~~~~~~~s~d~~~l~~~~~ 73 (181)
+-..+.+++|+| +.+.+|.-...|...+|++..++. .... ...+. .-..+.|.++-..|+..+.
T Consensus 144 gg~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r 223 (765)
T PF10214_consen 144 GGFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR 223 (765)
T ss_pred CCCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC
Confidence 333467899998 455799999999999999921111 0100 00110 0125678777777766654
Q ss_pred CCcEEEEeCCCCC----------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCC
Q psy10953 74 DGIINIFDANTGH----------SSWVLSTAFTRDGK-FFISASADHTVRVWNFAR 118 (181)
Q Consensus 74 d~~v~i~d~~~~~----------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~ 118 (181)
. .+.++|+.+.. ..+|.++.-+|... +++.- ....|.+.+...
T Consensus 224 ~-~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 224 S-KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS 277 (765)
T ss_pred C-ceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence 4 57788876542 24677888888732 22222 235788888776
No 475
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=76.02 E-value=19 Score=27.04 Aligned_cols=56 Identities=5% Similarity=0.026 Sum_probs=39.6
Q ss_pred CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEcc----CCCEEEEEcCCCcEEEE
Q psy10953 100 KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAP----DGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 100 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp----~g~~l~~~~~d~~v~i~ 155 (181)
..|+.|+.++.|++.|......+.+...+.....++.+- -.-+|+.+++||.|++.
T Consensus 196 scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 196 SCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred ceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 478899999999999998888777777554433333221 23357778889988864
No 476
>PLN02153 epithiospecifier protein
Probab=75.68 E-value=35 Score=26.41 Aligned_cols=25 Identities=12% Similarity=0.222 Sum_probs=16.1
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEE
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLE 46 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~ 46 (181)
++++++.|+.+ ..+.+||..+.+..
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 114 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWT 114 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEE
Confidence 56666677653 24778888776554
No 477
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=75.30 E-value=35 Score=26.20 Aligned_cols=137 Identities=12% Similarity=0.174 Sum_probs=0.0
Q ss_pred eEEEEEEcCCCCEEEEEeC------------------CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQ------------------SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD 74 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d 74 (181)
+...+.+.++|..|++.-. |+.+.-.|+++++++..+....+....-...........+...
T Consensus 58 d~He~~it~~gt~lvt~~~~~~~dls~~gg~~~g~i~d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~~~~g~~~ 137 (299)
T PF14269_consen 58 DHHEFEITPDGTALVTAYNPTPADLSPVGGPEDGWILDDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDPLPGSGGSS 137 (299)
T ss_pred CccceEEcCCCcEEEEEccceeccccccCcCCCccEecceeEEeccCCCCEEEEEEhhheecccccccccccccCCCcCC
Q ss_pred CcEEEEeCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC-CcEEE-----EEEccCCCEEEEEcC
Q psy10953 75 GIINIFDANTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA-DQVWC-----VCVAPDGDKFVSVGE 148 (181)
Q Consensus 75 ~~v~i~d~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~-----~~~sp~g~~l~~~~~ 148 (181)
. ....--.++++...++|.+|+++-.-..|.+.|.++++.+..+.-+ ..-.. .++--+-+++-.+..
T Consensus 138 ~-------~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~ 210 (299)
T PF14269_consen 138 S-------FPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESND 210 (299)
T ss_pred C-------CCCCccEeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCC
Q ss_pred CCcEEEEe
Q psy10953 149 DKAVHMYS 156 (181)
Q Consensus 149 d~~v~i~~ 156 (181)
++.|.++|
T Consensus 211 ~~~IslFD 218 (299)
T PF14269_consen 211 DGTISLFD 218 (299)
T ss_pred CCEEEEEc
No 478
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=75.22 E-value=36 Score=26.33 Aligned_cols=54 Identities=15% Similarity=0.178 Sum_probs=28.0
Q ss_pred CCCCEEEEEeCC-----------CcEEEEeCCCCcEEEEEecC--CceEEEEEECCCCCEEEEeeCC
Q psy10953 21 PDDKYVLSGSQS-----------GKINLYGVETGKLEQIFDTR--GKFTLSIAYSTDGHWIASGALD 74 (181)
Q Consensus 21 ~~g~~l~~~~~d-----------~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~s~d~~~l~~~~~d 74 (181)
-++++.+.|+.+ ..+..||..+++-...-... ...-......-+++..+.|+.+
T Consensus 62 ~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 62 IDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred ECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence 467777777753 24667888776654432111 1111111113467777777654
No 479
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=75.11 E-value=13 Score=32.97 Aligned_cols=53 Identities=13% Similarity=0.254 Sum_probs=38.4
Q ss_pred CCCcEEEEecCCCceeee-eecCCcEEEEEEccCCCEEEE-EcCCC-----cEEEEeCCC
Q psy10953 107 ADHTVRVWNFARRENMHT-FKHADQVWCVCVAPDGDKFVS-VGEDK-----AVHMYSYKP 159 (181)
Q Consensus 107 ~d~~i~v~d~~~~~~~~~-~~~~~~v~~~~~sp~g~~l~~-~~~d~-----~v~i~~~~~ 159 (181)
..+.+.+-|......... +.+...+.+-+|||||++++- .+-++ .|++-++.+
T Consensus 327 ~~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 327 VTGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred CCCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 345888888877655544 677788999999999999876 55433 477777654
No 480
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=75.05 E-value=42 Score=26.99 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=69.6
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE--EEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKL--EQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-------- 84 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-------- 84 (181)
+.+..++||.+++.+. .|.+..= .+.++. ...-......+..+.+.+++..++++ ..|.+..-+...
T Consensus 242 ~~v~~~~dG~~~~vg~-~G~~~~s-~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~S~d~G~~~~~~~f 318 (398)
T PLN00033 242 STVNRSPDGDYVAVSS-RGNFYLT-WEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYVSKGTGLTEEDFDF 318 (398)
T ss_pred eeEEEcCCCCEEEEEC-CccEEEe-cCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEEecCCCCcccccce
Confidence 4456677777666654 4443221 122221 11111223345578888888877655 344443221110
Q ss_pred -----C-CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee----ecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 85 -----G-HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF----KHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 85 -----~-~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
. ....+.++.|.++++.++++. .|.+..-. ..++.-... ......+.+.|.++++-+++| .+|.|..
T Consensus 319 ~~~~~~~~~~~l~~v~~~~d~~~~a~G~-~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~ 395 (398)
T PLN00033 319 EEADIKSRGFGILDVGYRSKKEAWAAGG-SGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLR 395 (398)
T ss_pred eecccCCCCcceEEEEEcCCCcEEEEEC-CCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEE
Confidence 1 112367788888877665554 56665542 233221221 124567888888776666644 4565544
Q ss_pred E
Q psy10953 155 Y 155 (181)
Q Consensus 155 ~ 155 (181)
|
T Consensus 396 ~ 396 (398)
T PLN00033 396 Y 396 (398)
T ss_pred e
Confidence 3
No 481
>KOG2247|consensus
Probab=74.78 E-value=0.65 Score=37.69 Aligned_cols=95 Identities=17% Similarity=0.263 Sum_probs=64.3
Q ss_pred CeeeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEE-EEEECCCCCEEEEeeCCCcEEEEeCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTL-SIAYSTDGHWIASGALDGIINIFDAN---- 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~s~d~~~l~~~~~d~~v~i~d~~---- 83 (181)
.+....+++|.-+|..++ .+...+.+.+||+.+....++ ...+.... -+.|++-...++.+...+.+.+|+-.
T Consensus 73 ~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqL-E~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~ 151 (615)
T KOG2247|consen 73 PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQL-ESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRR 151 (615)
T ss_pred CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHH-hccCcchHHHHhhccCCccccccccccceEEEeccchhh
Confidence 344456677777777654 566778999999976544332 22222111 25788888888888888999999854
Q ss_pred ---CC-CcccEEEEEEcCCCCEEEEE
Q psy10953 84 ---TG-HSSWVLSTAFTRDGKFFISA 105 (181)
Q Consensus 84 ---~~-~~~~v~~~~~s~~~~~l~~~ 105 (181)
.| |..++...++.+.+..+...
T Consensus 152 iiv~Gkh~RRgtq~av~lEd~vil~d 177 (615)
T KOG2247|consen 152 IIVMGKHQRRGTQIAVTLEDYVILCD 177 (615)
T ss_pred hhhhcccccceeEEEecccceeeecC
Confidence 34 77788888888887765443
No 482
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=74.52 E-value=35 Score=26.57 Aligned_cols=68 Identities=12% Similarity=-0.013 Sum_probs=45.0
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC----C----------------CcEEEEeC
Q psy10953 98 DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE----D----------------KAVHMYSY 157 (181)
Q Consensus 98 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~----d----------------~~v~i~~~ 157 (181)
+|++.++-+..|.+..+|..+++.......++...+++|. |++++++.+ + ..|.+.|+
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl 289 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDL 289 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEEC
Confidence 4677777777788888887766554444556677888887 777765542 1 23567788
Q ss_pred CCCeeEEEcC
Q psy10953 158 KPEEEVEVNG 167 (181)
Q Consensus 158 ~~~~~~~~~~ 167 (181)
.+|..+....
T Consensus 290 ~tG~vv~~l~ 299 (335)
T TIGR03032 290 NSGDVVHWLR 299 (335)
T ss_pred CCCCEEEEEE
Confidence 8877655433
No 483
>KOG1897|consensus
Probab=73.99 E-value=68 Score=28.96 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=63.6
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCC--C----CEEEEeeCCCcEEEEeCCC-
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTD--G----HWIASGALDGIINIFDANT- 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d--~----~~l~~~~~d~~v~i~d~~~- 84 (181)
+......+.+...++.++.++.+...++..+.+...... -...+.|+.++|- + +.++.|.++..+.+.-...
T Consensus 489 ~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd 568 (1096)
T KOG1897|consen 489 KITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPD 568 (1096)
T ss_pred ceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCC
Confidence 333444455666666666666776667765553222111 1234668888874 2 2677788776655442210
Q ss_pred ----------C--CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy10953 85 ----------G--HSSWVLSTAFTRDGKFFISASADHTVRVWNFAR 118 (181)
Q Consensus 85 ----------~--~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 118 (181)
+ -...|...++--+..+|.++..||.+..|.+..
T Consensus 569 ~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~ 614 (1096)
T KOG1897|consen 569 LILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDI 614 (1096)
T ss_pred cceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEc
Confidence 0 123456667777788999999999988776543
No 484
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=73.02 E-value=8 Score=19.47 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=15.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q psy10953 22 DDKYVLSGSQSGKINLYGVET 42 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~ 42 (181)
.+..++.++.|+++..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 566788888999999998764
No 485
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=72.59 E-value=43 Score=25.99 Aligned_cols=15 Identities=27% Similarity=0.363 Sum_probs=11.3
Q ss_pred EEEEcCCCcEEEEeC
Q psy10953 143 FVSVGEDKAVHMYSY 157 (181)
Q Consensus 143 l~~~~~d~~v~i~~~ 157 (181)
++.+++|++|.=|+-
T Consensus 103 Fif~tEdGTisaW~p 117 (336)
T TIGR03118 103 FLFVTEDGTLSGWAP 117 (336)
T ss_pred EEEEeCCceEEeecC
Confidence 566778888888884
No 486
>PLN02193 nitrile-specifier protein
Probab=70.18 E-value=59 Score=26.63 Aligned_cols=138 Identities=10% Similarity=0.103 Sum_probs=66.8
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCcEEEEEec----CCceEEEEEECCCCCEEEEeeCCC-----cEEEEeCCCCC-
Q psy10953 22 DDKYVLSGSQSG-----KINLYGVETGKLEQIFDT----RGKFTLSIAYSTDGHWIASGALDG-----IINIFDANTGH- 86 (181)
Q Consensus 22 ~g~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~----~~~~~~~~~~s~d~~~l~~~~~d~-----~v~i~d~~~~~- 86 (181)
++++.+.|+.++ .+..||+.+.+....-.. ....-.++.. -+++..+.|+.++ .+..||+.+..
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W 306 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKW 306 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEE
Confidence 556666666543 577888887765443221 0111112221 2456666666543 45677764321
Q ss_pred ----------cccEEEEEEcCCCCEEEEEeCC----CcEEEEecCCCc--eeeeee--cCCcEEEEEEccCCCEEEEEcC
Q psy10953 87 ----------SSWVLSTAFTRDGKFFISASAD----HTVRVWNFARRE--NMHTFK--HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 87 ----------~~~v~~~~~s~~~~~l~~~~~d----~~i~v~d~~~~~--~~~~~~--~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
...-......-+++.++.++.+ ..+.+||+.+.+ .+.... ...+....+..-+++.++.|+.
T Consensus 307 ~~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~ 386 (470)
T PLN02193 307 FHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGE 386 (470)
T ss_pred EeCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCc
Confidence 0000111112356666666644 468889987653 121110 1111112222335677777775
Q ss_pred C--------------CcEEEEeCCCC
Q psy10953 149 D--------------KAVHMYSYKPE 160 (181)
Q Consensus 149 d--------------~~v~i~~~~~~ 160 (181)
. +.+.+||..+.
T Consensus 387 ~~~~~~~~~~~~~~~ndv~~~D~~t~ 412 (470)
T PLN02193 387 IAMDPLAHVGPGQLTDGTFALDTETL 412 (470)
T ss_pred cCCccccccCccceeccEEEEEcCcC
Confidence 3 24677777654
No 487
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=70.10 E-value=61 Score=26.70 Aligned_cols=45 Identities=16% Similarity=0.188 Sum_probs=28.3
Q ss_pred cEEEEEEccCCCEEEEEcCC-CcEEEEeCCCCeeEEEcCCCCcchh
Q psy10953 130 QVWCVCVAPDGDKFVSVGED-KAVHMYSYKPEEEVEVNGGGGEEEE 174 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~d-~~v~i~~~~~~~~~~~~~~~~~~~~ 174 (181)
.++++.+.+....|+..++. ..|...+..+++..-+.++...+.+
T Consensus 272 H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w~~ 317 (477)
T PF05935_consen 272 HINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGWNG 317 (477)
T ss_dssp -EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT--T
T ss_pred ccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCCCc
Confidence 47889999966666666665 4888889888877767777555444
No 488
>PRK13615 lipoprotein LpqB; Provisional
Probab=69.94 E-value=67 Score=27.15 Aligned_cols=96 Identities=17% Similarity=0.215 Sum_probs=56.6
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEeCCCCC-----cccEEEEEEcCCCCEEEEEeCCCcEEEEecCC-Cceeeeee----
Q psy10953 57 LSIAYSTDGHWIASGALDGIINIFDANTGH-----SSWVLSTAFTRDGKFFISASADHTVRVWNFAR-RENMHTFK---- 126 (181)
Q Consensus 57 ~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~-----~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~---- 126 (181)
.+++.++++..++....++.+.++...... ......-.|+++|-.- +...+...++..... +.. ....
T Consensus 337 ~s~avS~dg~~~A~v~~~~~l~vg~~~~~~~~~~~~~~Lt~PS~d~~g~vW-tv~~g~~~~l~~~~~~G~~-~~v~v~~~ 414 (557)
T PRK13615 337 DAATLSADGRQAAVRNASGVWSVGDGDRDAVLLDTRPGLVAPSLDAQGYVW-STPASDPRGLVAWGPDGVG-HPVAVSWT 414 (557)
T ss_pred ccceEcCCCceEEEEcCCceEEEecCCCcceeeccCCccccCcCcCCCCEE-EEeCCCceEEEEecCCCce-EEeecccc
Confidence 367889999998888777777776443111 1123455677877432 333333344444332 222 2221
Q ss_pred cCCcEEEEEEccCCCEEEEEcC---CCcEEE
Q psy10953 127 HADQVWCVCVAPDGDKFVSVGE---DKAVHM 154 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~~~---d~~v~i 154 (181)
....|..+.+|+||-+++.... .+.|++
T Consensus 415 ~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~v 445 (557)
T PRK13615 415 ATGRVVSLEVARDGARVLVQLETGAGPQLLV 445 (557)
T ss_pred CCCeeEEEEeCCCccEEEEEEecCCCCEEEE
Confidence 3357999999999998776543 345665
No 489
>KOG1900|consensus
Probab=68.67 E-value=1e+02 Score=28.77 Aligned_cols=142 Identities=13% Similarity=0.174 Sum_probs=81.7
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEE-CC-------CCCEEEEeeCCCcEEEEeCC----
Q psy10953 16 NVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAY-ST-------DGHWIASGALDGIINIFDAN---- 83 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-s~-------d~~~l~~~~~d~~v~i~d~~---- 83 (181)
.+-+-|.=++.+.. -|..+.+|+..++...+.+....+.+..+.. -| .=++++..+.-..+.++-+.
T Consensus 83 ~mGiFpeI~RaWiT-iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~ 161 (1311)
T KOG1900|consen 83 DMGIFPEIGRAWIT-IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEF 161 (1311)
T ss_pred eeccchhhcceEEE-eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccc
Confidence 34455554555544 3789999999987666666554444433322 22 22334333333344444321
Q ss_pred CC-------------CcccEEEEEEcCCCCEEEEEeCCCcEEEE--ecCC---Cc---e--------------eeee--e
Q psy10953 84 TG-------------HSSWVLSTAFTRDGKFFISASADHTVRVW--NFAR---RE---N--------------MHTF--K 126 (181)
Q Consensus 84 ~~-------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~--d~~~---~~---~--------------~~~~--~ 126 (181)
++ ....|+++....+|+.+++|- ||.++=. .... ++ . +.++ .
T Consensus 162 ~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~-dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~ 240 (1311)
T KOG1900|consen 162 TGELSIFNTSFKISVDGVSVNCITYTENGRIFFAGR-DGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGS 240 (1311)
T ss_pred cCcccccccceeeecCCceEEEEEeccCCcEEEeec-CCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCC
Confidence 10 123477888888999877655 4444321 1111 00 0 0011 2
Q ss_pred cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 127 HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+.++|..+++...-+.+.+-+.-+.|++|++.+
T Consensus 241 ~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 241 SKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 345788899988888899999999999999976
No 490
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=68.66 E-value=18 Score=22.17 Aligned_cols=28 Identities=29% Similarity=0.478 Sum_probs=21.1
Q ss_pred EEEEEEcCCCCEEEEEe-CCCcEEEEeCC
Q psy10953 14 MWNVVFSPDDKYVLSGS-QSGKINLYGVE 41 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~-~d~~i~~~d~~ 41 (181)
...|.++|++++|..++ ..+.|.+|..+
T Consensus 56 aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 56 ANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 35789999999886554 46788888764
No 491
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=67.75 E-value=24 Score=29.44 Aligned_cols=19 Identities=16% Similarity=0.372 Sum_probs=12.6
Q ss_pred cccEEEEEEcCCCCEEEEE
Q psy10953 87 SSWVLSTAFTRDGKFFISA 105 (181)
Q Consensus 87 ~~~v~~~~~s~~~~~l~~~ 105 (181)
...++.+.|+||++.|+..
T Consensus 501 gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 501 GAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred CcccccceECCCCCEEEEE
Confidence 3446677788888766553
No 492
>KOG3616|consensus
Probab=67.71 E-value=17 Score=31.70 Aligned_cols=59 Identities=25% Similarity=0.430 Sum_probs=38.4
Q ss_pred ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccE-------EEEEEcCCCCEEEEEeCCCcEEEE
Q psy10953 54 KFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWV-------LSTAFTRDGKFFISASADHTVRVW 114 (181)
Q Consensus 54 ~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v-------~~~~~s~~~~~l~~~~~d~~i~v~ 114 (181)
.++..+.-+|.|+.++.++.||.+.+|+......+.| ..+.|...| |++...|..+.-|
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhg--l~~~tsdrr~la~ 80 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHG--LVTATSDRRALAW 80 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccc--eEEEeccchhhee
Confidence 3455777789999999999999999998654322222 223343333 4556666666666
No 493
>KOG1900|consensus
Probab=67.66 E-value=74 Score=29.61 Aligned_cols=76 Identities=17% Similarity=0.298 Sum_probs=43.3
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC----CC---c-E-------------E----EEEecCCceEEEEE
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE----TG---K-L-------------E----QIFDTRGKFTLSIA 60 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~----~~---~-~-------------~----~~~~~~~~~~~~~~ 60 (181)
++..+...+.++.-..+|+.+++|- || .+|.+. .+ + . + .....+.+.+..+.
T Consensus 173 ~i~~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ 249 (1311)
T KOG1900|consen 173 KISVDGVSVNCITYTENGRIFFAGR-DG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQIT 249 (1311)
T ss_pred eeecCCceEEEEEeccCCcEEEeec-CC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeE
Confidence 4556677889999777887766654 55 344432 11 0 0 0 00101233455566
Q ss_pred ECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 61 YSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 61 ~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.....+.+.+-+..++|..||+..
T Consensus 250 ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 250 IDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eccccceeeeeccCceEEEEEccC
Confidence 665566666677777777777653
No 494
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=64.21 E-value=51 Score=28.93 Aligned_cols=65 Identities=14% Similarity=0.098 Sum_probs=46.1
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee--------------------ecCCcEEEEEEccCCCEEEEEcC
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF--------------------KHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------------------~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
.|.++....-+.+++..-.||+|.++|-.+.+.+... +.-..+..++|||++..++.-..
T Consensus 261 ~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~ 340 (753)
T PF11635_consen 261 RVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDE 340 (753)
T ss_pred eEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEec
Confidence 4666776667788888899999999997654322211 11112345889999999999998
Q ss_pred CCcEE
Q psy10953 149 DKAVH 153 (181)
Q Consensus 149 d~~v~ 153 (181)
++.+.
T Consensus 341 ~~~~~ 345 (753)
T PF11635_consen 341 DGKTK 345 (753)
T ss_pred CCCce
Confidence 88866
No 495
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=64.01 E-value=93 Score=26.60 Aligned_cols=134 Identities=17% Similarity=0.104 Sum_probs=0.0
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCC----cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSG----KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
............+.|+|+|+.++..+.++ .+.+.+.. + .+......+....|++++..++....++....-
T Consensus 53 ~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g----~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~ 127 (620)
T COG1506 53 VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G----LITKTAFGVSDARWSPDGDRIAFLTAEGASKRD 127 (620)
T ss_pred ccccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecC-C----ceeeeecccccceeCCCCCeEEEEecccccccC
Q ss_pred eCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 81 DANTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 81 d~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
+. ......=..+.|...+ .....+++.|... ...........+...+++++++.++....+..
T Consensus 128 ~~-~~~~~~~~~~~~~~~g------~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (620)
T COG1506 128 GG-DHLFVDRLPVWFDGRG------GERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDD 190 (620)
T ss_pred Cc-eeeeecccceeecCCC------CcccceEEEccCc-ccccccCCCCceeeeeeCCCCceeEEeeeccc
No 496
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=62.80 E-value=67 Score=24.59 Aligned_cols=58 Identities=10% Similarity=0.216 Sum_probs=37.0
Q ss_pred CCEEEEEeCCCcEEEEecCCC-ceeeeeecCCcEEEEEEccCCCEEEEEcC-CCcEEEEeC
Q psy10953 99 GKFFISASADHTVRVWNFARR-ENMHTFKHADQVWCVCVAPDGDKFVSVGE-DKAVHMYSY 157 (181)
Q Consensus 99 ~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~~v~i~~~ 157 (181)
+++++.|+.+| +++.+.... ..+........|..+.+.+..+.+++-+. ...++.+++
T Consensus 13 ~~~lL~GTe~G-ly~~~~~~~~~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L 72 (302)
T smart00036 13 GKWLLVGTEEG-LYVLNISDQPGTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPL 72 (302)
T ss_pred CcEEEEEeCCc-eEEEEcccCCCCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEH
Confidence 35777788776 445555432 23333444557888888888777766653 345888887
No 497
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=62.28 E-value=75 Score=24.92 Aligned_cols=99 Identities=23% Similarity=0.359 Sum_probs=54.8
Q ss_pred EEEEeCCCcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEE---------EE
Q psy10953 26 VLSGSQSGKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLS---------TA 94 (181)
Q Consensus 26 l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~---------~~ 94 (181)
+.++..+|.|.-+|..+++.+-...... ....+-.+..+|+ ++.++.++.++.+|..++...+... ..
T Consensus 71 v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~ 149 (370)
T COG1520 71 VYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPP 149 (370)
T ss_pred EEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecCc
Confidence 4455678888888888888653222221 1111222222666 7778888888888886654322211 11
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCceeeeee
Q psy10953 95 FTRDGKFFISASADHTVRVWNFARRENMHTFK 126 (181)
Q Consensus 95 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 126 (181)
.-.++..+ ..+.++.++-.|..++.......
T Consensus 150 v~~~~~v~-~~s~~g~~~al~~~tG~~~W~~~ 180 (370)
T COG1520 150 VVGDGTVY-VGTDDGHLYALNADTGTLKWTYE 180 (370)
T ss_pred EEcCcEEE-EecCCCeEEEEEccCCcEEEEEe
Confidence 11223322 23356777777777777655543
No 498
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=61.99 E-value=77 Score=25.00 Aligned_cols=48 Identities=13% Similarity=0.241 Sum_probs=23.8
Q ss_pred EEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCCC------cEEEEeCCC
Q psy10953 111 VRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGEDK------AVHMYSYKP 159 (181)
Q Consensus 111 i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~------~v~i~~~~~ 159 (181)
+.+||+.+.+ .+..++. ..-...+..-+++.++.|+... .|+.++...
T Consensus 314 ~e~yd~~~~~W~~~~~lp~-~r~~~~av~~~~~iyv~GG~~~~~~~~~~v~~~~~~~ 369 (376)
T PRK14131 314 DEIYALVNGKWQKVGELPQ-GLAYGVSVSWNNGVLLIGGETAGGKAVSDVTLLSWDG 369 (376)
T ss_pred hheEEecCCcccccCcCCC-CccceEEEEeCCEEEEEcCCCCCCcEeeeEEEEEEcC
Confidence 4567776532 1222221 1122334455778888887532 455555544
No 499
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=61.12 E-value=48 Score=22.29 Aligned_cols=74 Identities=12% Similarity=0.221 Sum_probs=0.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEecC--------CCceeeeeecCCcEEEEEEcc----CCCEEEEEcCCCcEEEEeC
Q psy10953 90 VLSTAFTRDGKFFISASADHTVRVWNFA--------RRENMHTFKHADQVWCVCVAP----DGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d~~i~v~d~~--------~~~~~~~~~~~~~v~~~~~sp----~g~~l~~~~~d~~v~i~~~ 157 (181)
|..-.|+.....|++++..++|.|++.. ....+..+.-...|.+++-.| +++-++..+....+..||.
T Consensus 1 VaiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV 80 (136)
T PF14781_consen 1 VAIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDV 80 (136)
T ss_pred CeEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEc
Q ss_pred CCCeeE
Q psy10953 158 KPEEEV 163 (181)
Q Consensus 158 ~~~~~~ 163 (181)
.....+
T Consensus 81 ~~N~d~ 86 (136)
T PF14781_consen 81 ENNSDL 86 (136)
T ss_pred ccCchh
No 500
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=61.04 E-value=38 Score=28.33 Aligned_cols=20 Identities=20% Similarity=0.488 Sum_probs=16.5
Q ss_pred cCCcEEEEEEccCCCEEEEE
Q psy10953 127 HADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~ 146 (181)
...++.+++|+||++.|+..
T Consensus 500 ~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 500 NGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred CCcccccceECCCCCEEEEE
Confidence 45678999999999988764
Done!