Query psy10953
Match_columns 181
No_of_seqs 132 out of 1199
Neff 10.2
Searched_HMMs 29240
Date Fri Aug 16 22:42:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10953.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10953hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 2.1E-30 7.3E-35 196.7 23.9 154 5-158 158-320 (321)
2 2ynn_A Coatomer subunit beta'; 100.0 2E-30 6.9E-35 195.1 23.0 160 3-162 5-175 (304)
3 3ow8_A WD repeat-containing pr 100.0 4.5E-30 1.5E-34 194.9 24.0 166 3-168 114-288 (321)
4 4gqb_B Methylosome protein 50; 100.0 1.7E-29 5.7E-34 193.7 25.4 159 9-167 125-297 (344)
5 2ynn_A Coatomer subunit beta'; 100.0 5.1E-29 1.7E-33 187.5 26.1 167 3-169 89-269 (304)
6 3frx_A Guanine nucleotide-bind 100.0 7.4E-29 2.5E-33 187.8 26.2 164 4-167 58-235 (319)
7 1got_B GT-beta; complex (GTP-b 100.0 3E-29 1E-33 191.4 24.1 154 3-156 176-340 (340)
8 1vyh_C Platelet-activating fac 100.0 4E-29 1.4E-33 195.4 24.7 161 6-166 103-272 (410)
9 4ery_A WD repeat-containing pr 100.0 1.8E-28 6.3E-33 184.3 27.0 162 5-166 17-187 (312)
10 1got_B GT-beta; complex (GTP-b 100.0 1.8E-28 6.2E-33 187.1 26.2 165 3-168 47-224 (340)
11 2pbi_B Guanine nucleotide-bind 100.0 2.6E-28 8.9E-33 187.4 26.1 167 2-168 55-238 (354)
12 4g56_B MGC81050 protein; prote 100.0 8.3E-29 2.8E-33 190.4 22.4 156 9-164 137-348 (357)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.9E-29 2.7E-33 189.5 22.1 160 2-161 6-183 (345)
14 1vyh_C Platelet-activating fac 100.0 2E-28 6.7E-33 191.4 24.7 166 3-168 184-378 (410)
15 4ery_A WD repeat-containing pr 100.0 8.5E-28 2.9E-32 180.7 27.0 165 4-168 58-232 (312)
16 4h5i_A Guanine nucleotide-exch 100.0 9.7E-29 3.3E-33 190.6 22.2 148 12-160 134-344 (365)
17 1nr0_A Actin interacting prote 100.0 3.5E-28 1.2E-32 198.7 25.7 162 5-166 141-362 (611)
18 2xzm_R RACK1; ribosome, transl 100.0 6.6E-28 2.3E-32 184.1 24.7 153 5-158 70-243 (343)
19 2hes_X YDR267CP; beta-propelle 100.0 7.6E-28 2.6E-32 183.0 25.0 165 2-168 5-195 (330)
20 2pbi_B Guanine nucleotide-bind 100.0 1.7E-27 5.7E-32 182.9 26.7 164 6-169 149-325 (354)
21 4gqb_B Methylosome protein 50; 100.0 7.6E-28 2.6E-32 184.5 23.3 158 3-160 161-332 (344)
22 2pm7_B Protein transport prote 100.0 1.4E-27 4.9E-32 179.0 24.0 158 4-161 2-191 (297)
23 2hes_X YDR267CP; beta-propelle 100.0 2E-27 7E-32 180.7 24.4 151 10-160 57-231 (330)
24 3iz6_a 40S ribosomal protein R 100.0 5.8E-28 2E-32 186.9 21.7 165 4-168 59-289 (380)
25 1nr0_A Actin interacting prote 100.0 3.3E-27 1.1E-31 192.9 26.9 163 4-166 52-277 (611)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-27 4.6E-32 182.7 22.6 150 8-157 58-223 (345)
27 1erj_A Transcriptional repress 100.0 2.7E-27 9.1E-32 183.9 24.2 148 13-160 125-288 (393)
28 1erj_A Transcriptional repress 100.0 5.9E-27 2E-31 182.0 25.2 164 4-168 158-350 (393)
29 3dm0_A Maltose-binding peripla 100.0 3E-27 1E-31 195.4 25.0 162 5-166 424-599 (694)
30 2ymu_A WD-40 repeat protein; u 100.0 2.7E-27 9.1E-32 190.9 22.9 151 4-156 419-577 (577)
31 3iz6_a 40S ribosomal protein R 100.0 2.1E-27 7.2E-32 183.8 20.6 153 9-161 203-377 (380)
32 3frx_A Guanine nucleotide-bind 100.0 2.1E-26 7.1E-31 174.3 24.5 165 4-168 10-194 (319)
33 2pm7_B Protein transport prote 100.0 1.2E-26 4.1E-31 173.9 22.5 158 3-160 45-239 (297)
34 3dwl_C Actin-related protein 2 100.0 5.2E-28 1.8E-32 185.8 15.1 160 3-162 47-239 (377)
35 2ymu_A WD-40 repeat protein; u 100.0 3E-26 1E-30 184.8 24.3 162 4-168 378-547 (577)
36 2xzm_R RACK1; ribosome, transl 100.0 5.6E-26 1.9E-30 173.4 24.6 156 3-158 13-202 (343)
37 3mmy_A MRNA export factor; mRN 100.0 8.2E-26 2.8E-30 171.9 25.0 167 2-168 30-313 (368)
38 2w18_A PALB2, fancn, partner a 100.0 2.5E-27 8.4E-32 179.8 16.3 151 6-157 173-355 (356)
39 3f3f_A Nucleoporin SEH1; struc 100.0 3.2E-26 1.1E-30 172.3 22.3 161 4-164 50-342 (351)
40 1gxr_A ESG1, transducin-like e 100.0 1.7E-25 5.8E-30 168.4 25.8 161 5-165 135-302 (337)
41 4aow_A Guanine nucleotide-bind 100.0 2.2E-25 7.6E-30 168.3 25.6 163 6-168 33-255 (340)
42 1gxr_A ESG1, transducin-like e 100.0 4.6E-25 1.6E-29 166.1 27.1 159 9-167 95-263 (337)
43 3vl1_A 26S proteasome regulato 99.9 1.4E-25 4.8E-30 174.4 23.7 157 5-161 133-324 (420)
44 3dwl_C Actin-related protein 2 99.9 3.6E-27 1.2E-31 181.1 13.6 158 1-158 1-176 (377)
45 1k8k_C P40, ARP2/3 complex 41 99.9 1.8E-25 6.3E-30 170.7 22.8 166 3-168 44-242 (372)
46 4e54_B DNA damage-binding prot 99.9 2.7E-26 9.2E-31 180.3 18.6 158 6-163 159-331 (435)
47 3ei3_B DNA damage-binding prot 99.9 2.8E-25 9.4E-30 171.2 23.2 155 4-159 66-236 (383)
48 4g56_B MGC81050 protein; prote 99.9 6.1E-26 2.1E-30 174.4 19.2 155 9-164 40-218 (357)
49 3f3f_A Nucleoporin SEH1; struc 99.9 3.2E-25 1.1E-29 166.9 22.7 154 7-160 7-250 (351)
50 3bg1_A Protein SEC13 homolog; 99.9 2E-26 6.8E-31 174.2 16.1 153 8-160 10-199 (316)
51 3jrp_A Fusion protein of prote 99.9 1.6E-25 5.4E-30 171.1 20.8 158 3-160 3-192 (379)
52 3mkq_A Coatomer beta'-subunit; 99.9 1.1E-25 3.7E-30 188.0 21.3 162 2-163 4-176 (814)
53 3zwl_B Eukaryotic translation 99.9 7.7E-25 2.6E-29 166.6 24.2 163 3-166 66-256 (369)
54 3zwl_B Eukaryotic translation 99.9 5.3E-25 1.8E-29 167.4 22.9 164 4-167 25-215 (369)
55 4e54_B DNA damage-binding prot 99.9 7.1E-26 2.4E-30 178.0 18.6 151 10-161 118-284 (435)
56 2aq5_A Coronin-1A; WD40 repeat 99.9 2.3E-25 7.8E-30 173.0 21.2 158 4-161 74-256 (402)
57 1k8k_C P40, ARP2/3 complex 41 99.9 4.5E-25 1.5E-29 168.5 22.0 151 8-158 5-172 (372)
58 3vl1_A 26S proteasome regulato 99.9 1.5E-25 5.1E-30 174.2 19.6 154 14-167 100-286 (420)
59 4ggc_A P55CDC, cell division c 99.9 1.3E-24 4.4E-29 162.7 24.0 155 7-161 63-317 (318)
60 3gre_A Serine/threonine-protei 99.9 3.4E-25 1.2E-29 173.4 21.4 163 3-166 54-252 (437)
61 4aow_A Guanine nucleotide-bind 99.9 1.2E-24 4E-29 164.3 23.5 154 8-162 168-340 (340)
62 3dw8_B Serine/threonine-protei 99.9 2.7E-25 9.1E-30 173.9 20.5 151 11-162 28-261 (447)
63 1sq9_A Antiviral protein SKI8; 99.9 3.5E-25 1.2E-29 170.8 20.8 151 9-160 184-396 (397)
64 3bg1_A Protein SEC13 homolog; 99.9 6.6E-26 2.3E-30 171.4 16.3 156 4-159 50-247 (316)
65 3dm0_A Maltose-binding peripla 99.9 1.2E-24 4.1E-29 179.9 25.2 164 5-168 376-559 (694)
66 3ei3_B DNA damage-binding prot 99.9 6E-25 2.1E-29 169.3 21.9 153 9-162 116-285 (383)
67 3sfz_A APAF-1, apoptotic pepti 99.9 1.3E-24 4.6E-29 188.9 25.5 158 7-164 611-779 (1249)
68 2j04_B YDR362CP, TAU91; beta p 99.9 1.3E-25 4.5E-30 180.7 17.5 153 6-159 261-428 (524)
69 1r5m_A SIR4-interacting protei 99.9 6.9E-25 2.4E-29 169.7 20.6 154 4-158 240-424 (425)
70 3jrp_A Fusion protein of prote 99.9 1.8E-24 6.2E-29 165.2 22.4 157 4-160 48-241 (379)
71 3lrv_A PRE-mRNA-splicing facto 99.9 7.2E-25 2.5E-29 167.1 19.7 148 12-160 126-293 (343)
72 3k26_A Polycomb protein EED; W 99.9 4.9E-25 1.7E-29 167.7 18.3 157 3-161 107-320 (366)
73 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.9E-24 6.4E-29 170.4 22.2 154 13-167 104-279 (450)
74 4aez_A CDC20, WD repeat-contai 99.9 1.8E-24 6.2E-29 168.1 21.4 161 4-164 210-385 (401)
75 2j04_A TAU60, YPL007P, hypothe 99.9 1.3E-24 4.4E-29 174.3 20.5 148 11-166 85-261 (588)
76 2oaj_A Protein SNI1; WD40 repe 99.9 9.8E-26 3.3E-30 191.5 14.5 153 10-163 434-668 (902)
77 2pm9_A Protein WEB1, protein t 99.9 1.2E-24 4E-29 168.6 19.4 154 8-161 162-339 (416)
78 3v7d_B Cell division control p 99.9 9.9E-24 3.4E-28 166.2 24.2 164 3-169 154-351 (464)
79 3dw8_B Serine/threonine-protei 99.9 1.1E-24 3.8E-29 170.4 18.6 158 8-167 174-381 (447)
80 4aez_A CDC20, WD repeat-contai 99.9 1.2E-23 4E-28 163.5 24.1 156 10-167 133-301 (401)
81 2aq5_A Coronin-1A; WD40 repeat 99.9 3.1E-24 1.1E-28 166.6 20.3 159 3-161 123-301 (402)
82 1r5m_A SIR4-interacting protei 99.9 2.5E-23 8.5E-28 161.0 24.7 157 10-168 107-328 (425)
83 2oaj_A Protein SNI1; WD40 repe 99.9 5.7E-24 2E-28 180.7 22.8 152 10-164 57-247 (902)
84 1yfq_A Cell cycle arrest prote 99.9 1.2E-24 4.1E-29 164.6 16.7 155 1-159 1-179 (342)
85 3mkq_A Coatomer beta'-subunit; 99.9 4.4E-24 1.5E-28 178.3 21.7 165 3-167 47-225 (814)
86 1sq9_A Antiviral protein SKI8; 99.9 4.2E-24 1.4E-28 164.7 19.8 163 4-167 109-330 (397)
87 1pgu_A Actin interacting prote 99.9 1E-23 3.5E-28 170.6 22.7 165 2-166 54-245 (615)
88 2j04_A TAU60, YPL007P, hypothe 99.9 5.4E-25 1.9E-29 176.4 14.9 143 14-161 18-213 (588)
89 3k26_A Polycomb protein EED; W 99.9 8.2E-24 2.8E-28 160.9 20.7 153 9-161 16-194 (366)
90 3i2n_A WD repeat-containing pr 99.9 6.8E-24 2.3E-28 161.0 20.1 148 13-161 166-355 (357)
91 4a11_B DNA excision repair pro 99.9 4.2E-23 1.4E-27 159.1 24.1 155 10-164 140-370 (408)
92 2j04_B YDR362CP, TAU91; beta p 99.9 2.7E-24 9.1E-29 173.1 17.8 154 8-162 204-389 (524)
93 2pm9_A Protein WEB1, protein t 99.9 4E-24 1.4E-28 165.7 17.8 166 3-168 105-303 (416)
94 4gga_A P55CDC, cell division c 99.9 2.6E-23 8.9E-28 162.6 22.2 159 4-162 223-398 (420)
95 3odt_A Protein DOA1; ubiquitin 99.9 2.2E-23 7.6E-28 155.5 20.4 156 3-163 134-300 (313)
96 2xyi_A Probable histone-bindin 99.9 9.1E-24 3.1E-28 165.8 19.1 154 6-159 123-309 (430)
97 3gre_A Serine/threonine-protei 99.9 4.4E-24 1.5E-28 167.1 16.9 154 14-168 171-368 (437)
98 3i2n_A WD repeat-containing pr 99.9 1.3E-23 4.5E-28 159.4 18.8 152 10-161 64-245 (357)
99 3jro_A Fusion protein of prote 99.9 1.1E-23 3.6E-28 176.0 19.6 156 5-160 3-190 (753)
100 2xyi_A Probable histone-bindin 99.9 5.2E-23 1.8E-27 161.5 22.2 157 4-160 224-411 (430)
101 3sfz_A APAF-1, apoptotic pepti 99.9 7.4E-23 2.5E-27 177.9 25.4 166 3-168 649-880 (1249)
102 4a11_B DNA excision repair pro 99.9 8.2E-23 2.8E-27 157.4 22.9 157 5-161 37-220 (408)
103 1yfq_A Cell cycle arrest prote 99.9 2.3E-23 8E-28 157.5 19.3 161 5-169 93-292 (342)
104 3jro_A Fusion protein of prote 99.9 2.8E-23 9.6E-28 173.5 21.5 157 4-160 46-239 (753)
105 3odt_A Protein DOA1; ubiquitin 99.9 2.1E-22 7.2E-27 150.2 24.0 151 2-157 9-172 (313)
106 3mmy_A MRNA export factor; mRN 99.9 2.8E-23 9.7E-28 157.8 18.8 161 5-166 80-356 (368)
107 3lrv_A PRE-mRNA-splicing facto 99.9 3.7E-23 1.3E-27 157.6 18.6 148 12-163 77-248 (343)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-22 3.6E-27 160.4 21.5 151 9-160 147-342 (450)
109 4gga_A P55CDC, cell division c 99.9 4.6E-22 1.6E-26 155.5 24.9 163 7-169 143-363 (420)
110 4gq1_A NUP37; propeller, trans 99.9 8E-24 2.7E-28 164.5 14.3 159 7-165 132-354 (393)
111 3vu4_A KMHSV2; beta-propeller 99.9 2.3E-22 7.8E-27 154.3 21.8 145 15-160 62-272 (355)
112 1pgu_A Actin interacting prote 99.9 3.1E-22 1.1E-26 161.9 23.1 161 5-168 110-292 (615)
113 3v7d_B Cell division control p 99.9 3.4E-22 1.2E-26 157.5 22.7 154 7-165 266-427 (464)
114 1l0q_A Surface layer protein; 99.9 4.6E-21 1.6E-25 147.7 25.3 154 13-167 33-197 (391)
115 1l0q_A Surface layer protein; 99.9 6.4E-21 2.2E-25 146.9 25.3 156 12-168 116-284 (391)
116 1p22_A F-BOX/WD-repeat protein 99.9 4.9E-21 1.7E-25 150.2 24.5 158 3-168 165-334 (435)
117 4gq1_A NUP37; propeller, trans 99.9 8.4E-23 2.9E-27 158.7 13.2 148 17-164 95-291 (393)
118 4ggc_A P55CDC, cell division c 99.9 3.6E-21 1.2E-25 144.0 19.7 143 14-160 28-182 (318)
119 3vu4_A KMHSV2; beta-propeller 99.9 2.2E-21 7.7E-26 148.8 18.6 143 16-160 142-337 (355)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.8E-20 6.3E-25 147.1 24.0 158 3-168 151-317 (445)
121 1p22_A F-BOX/WD-repeat protein 99.9 1.6E-20 5.3E-25 147.3 23.4 151 10-168 132-294 (435)
122 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-20 6.2E-25 146.7 23.7 162 4-166 171-351 (415)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.4E-20 4.7E-25 147.8 23.1 151 4-160 272-443 (445)
124 2w18_A PALB2, fancn, partner a 99.9 5.7E-21 1.9E-25 145.0 19.4 158 10-169 110-324 (356)
125 3bws_A Protein LP49; two-domai 99.9 2E-20 7E-25 145.9 22.7 158 9-166 167-341 (433)
126 3bws_A Protein LP49; two-domai 99.9 6.3E-20 2.1E-24 143.1 23.8 164 4-168 204-399 (433)
127 4h5i_A Guanine nucleotide-exch 99.9 3.4E-21 1.2E-25 148.4 14.5 149 12-163 15-210 (365)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-21 8.6E-26 152.5 13.1 144 13-158 38-222 (434)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-20 3.5E-25 149.1 15.4 147 13-160 94-279 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.9E-19 1E-23 139.9 22.4 160 5-166 216-394 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.8 7.1E-19 2.4E-23 145.9 18.2 138 11-150 36-230 (741)
132 1nir_A Nitrite reductase; hemo 99.8 1.4E-17 4.9E-22 134.6 23.1 162 4-167 172-363 (543)
133 2ojh_A Uncharacterized protein 99.8 9.4E-18 3.2E-22 123.4 19.6 152 6-158 36-203 (297)
134 1pby_B Quinohemoprotein amine 99.8 1.8E-17 6.1E-22 124.6 18.7 149 13-166 83-317 (337)
135 3vgz_A Uncharacterized protein 99.8 5.9E-17 2E-21 122.7 20.9 153 13-166 142-310 (353)
136 3u4y_A Uncharacterized protein 99.8 2E-16 6.7E-21 119.2 23.1 156 6-162 35-210 (331)
137 3u4y_A Uncharacterized protein 99.8 4.9E-17 1.7E-21 122.5 19.4 146 16-162 88-255 (331)
138 1ri6_A Putative isomerase YBHE 99.8 1.5E-16 5.1E-21 119.8 21.3 146 13-158 130-307 (343)
139 1xfd_A DIP, dipeptidyl aminope 99.8 2.1E-18 7.3E-23 142.6 9.8 134 14-149 19-193 (723)
140 3vgz_A Uncharacterized protein 99.8 2.9E-16 1E-20 118.8 20.7 152 14-165 91-268 (353)
141 1ri6_A Putative isomerase YBHE 99.7 1.1E-16 3.8E-21 120.5 17.2 147 12-159 38-209 (343)
142 2ecf_A Dipeptidyl peptidase IV 99.7 4.2E-17 1.4E-21 135.3 15.7 153 4-158 144-366 (741)
143 2ojh_A Uncharacterized protein 99.7 1.3E-16 4.3E-21 117.4 16.4 150 12-163 85-262 (297)
144 1z68_A Fibroblast activation p 99.7 1.2E-17 4E-22 138.4 11.9 134 14-149 18-189 (719)
145 2z3z_A Dipeptidyl aminopeptida 99.7 2.7E-17 9.1E-22 135.9 13.9 160 7-167 116-351 (706)
146 3scy_A Hypothetical bacterial 99.7 1.2E-15 4.1E-20 116.5 22.2 150 14-163 157-343 (361)
147 1xfd_A DIP, dipeptidyl aminope 99.7 6E-17 2.1E-21 133.9 15.7 151 14-165 63-295 (723)
148 3hfq_A Uncharacterized protein 99.7 1.3E-15 4.4E-20 115.7 21.6 151 13-163 142-323 (347)
149 1jmx_B Amine dehydrogenase; ox 99.7 2.3E-16 8E-21 119.1 16.7 146 14-165 94-331 (349)
150 2z3z_A Dipeptidyl aminopeptida 99.7 1.6E-16 5.6E-21 131.2 17.1 145 12-160 82-294 (706)
151 1nir_A Nitrite reductase; hemo 99.7 5.7E-16 2E-20 125.2 19.6 143 18-161 144-313 (543)
152 3hfq_A Uncharacterized protein 99.7 7.5E-16 2.6E-20 117.0 18.9 149 11-159 85-271 (347)
153 1k32_A Tricorn protease; prote 99.7 1.8E-16 6E-21 136.6 16.5 152 13-166 297-468 (1045)
154 1k32_A Tricorn protease; prote 99.7 2.2E-16 7.4E-21 136.0 17.1 151 6-158 331-501 (1045)
155 1jmx_B Amine dehydrogenase; ox 99.7 7E-16 2.4E-20 116.5 15.6 149 16-167 4-183 (349)
156 1pby_B Quinohemoprotein amine 99.7 1.4E-15 4.8E-20 114.2 16.9 142 24-167 2-171 (337)
157 3o4h_A Acylamino-acid-releasin 99.7 4.8E-16 1.7E-20 126.0 14.8 139 15-157 113-274 (582)
158 1z68_A Fibroblast activation p 99.7 7.9E-17 2.7E-21 133.4 9.4 148 14-163 62-295 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 99.7 5.5E-15 1.9E-19 113.4 18.7 149 12-160 145-342 (365)
160 3pe7_A Oligogalacturonate lyas 99.7 3.8E-15 1.3E-19 114.4 17.2 163 3-165 22-231 (388)
161 4a5s_A Dipeptidyl peptidase 4 99.7 2.2E-15 7.6E-20 125.6 17.0 133 13-148 18-190 (740)
162 3scy_A Hypothetical bacterial 99.7 2.9E-14 9.9E-19 108.8 20.8 147 13-161 51-244 (361)
163 3o4h_A Acylamino-acid-releasin 99.7 3.2E-15 1.1E-19 121.2 15.2 155 11-168 21-193 (582)
164 3azo_A Aminopeptidase; POP fam 99.7 6.7E-15 2.3E-19 120.7 17.2 151 10-161 128-327 (662)
165 1jof_A Carboxy-CIS,CIS-muconat 99.7 6.2E-15 2.1E-19 113.2 15.9 144 13-158 41-223 (365)
166 3fvz_A Peptidyl-glycine alpha- 99.6 2.3E-13 7.9E-18 103.1 23.3 154 12-166 24-234 (329)
167 3azo_A Aminopeptidase; POP fam 99.6 2.3E-14 7.7E-19 117.6 18.6 152 16-167 81-282 (662)
168 4a5s_A Dipeptidyl peptidase 4 99.6 8.5E-15 2.9E-19 122.0 15.1 164 4-168 104-362 (740)
169 2oiz_A Aromatic amine dehydrog 99.6 1.1E-13 3.7E-18 106.4 19.9 149 16-166 54-343 (361)
170 1q7f_A NHL, brain tumor CG1071 99.6 2.3E-13 7.9E-18 100.6 20.5 146 12-160 121-281 (286)
171 3pe7_A Oligogalacturonate lyas 99.6 1.1E-13 3.7E-18 106.2 18.3 149 15-163 84-277 (388)
172 2dg1_A DRP35, lactonase; beta 99.6 7.5E-13 2.6E-17 99.8 22.0 153 7-159 40-213 (333)
173 3e5z_A Putative gluconolactona 99.6 9.9E-13 3.4E-17 97.8 20.2 152 4-158 20-201 (296)
174 2xdw_A Prolyl endopeptidase; a 99.5 1.2E-12 4.1E-17 108.6 19.8 147 13-161 126-322 (710)
175 3fvz_A Peptidyl-glycine alpha- 99.5 7.5E-13 2.6E-17 100.3 17.0 146 13-159 144-322 (329)
176 3c5m_A Oligogalacturonate lyas 99.5 6.9E-13 2.4E-17 101.7 16.3 154 9-162 185-387 (396)
177 1q7f_A NHL, brain tumor CG1071 99.5 1.1E-11 3.7E-16 91.6 22.0 149 12-163 77-241 (286)
178 3c5m_A Oligogalacturonate lyas 99.5 1.2E-13 4E-18 106.1 10.7 149 17-165 86-279 (396)
179 2bkl_A Prolyl endopeptidase; m 99.5 7E-13 2.4E-17 109.8 16.1 147 13-161 122-306 (695)
180 2gop_A Trilobed protease; beta 99.5 4.4E-12 1.5E-16 95.9 18.3 145 13-165 60-257 (347)
181 3no2_A Uncharacterized protein 99.5 7.2E-12 2.5E-16 92.9 17.8 150 13-166 38-202 (276)
182 2mad_H Methylamine dehydrogena 99.5 5.4E-11 1.9E-15 91.9 22.2 149 16-165 70-356 (373)
183 1rwi_B Serine/threonine-protei 99.5 7.8E-12 2.7E-16 91.4 16.7 151 12-162 108-267 (270)
184 3e5z_A Putative gluconolactona 99.4 5.2E-11 1.8E-15 88.4 20.4 153 8-163 65-249 (296)
185 1xip_A Nucleoporin NUP159; bet 99.4 4.8E-12 1.7E-16 98.0 14.8 136 13-161 39-193 (388)
186 3dsm_A Uncharacterized protein 99.4 3.7E-11 1.3E-15 91.0 19.2 147 12-162 84-256 (328)
187 1qks_A Cytochrome CD1 nitrite 99.4 2.2E-10 7.7E-15 92.9 24.3 157 6-164 192-378 (567)
188 3no2_A Uncharacterized protein 99.4 2.4E-11 8.4E-16 90.1 16.5 141 21-165 3-160 (276)
189 2dg1_A DRP35, lactonase; beta 99.4 4.7E-10 1.6E-14 84.4 23.3 153 11-164 86-267 (333)
190 1yr2_A Prolyl oligopeptidase; 99.4 5.7E-11 1.9E-15 99.1 19.9 145 13-160 164-351 (741)
191 1rwi_B Serine/threonine-protei 99.4 6.7E-11 2.3E-15 86.3 17.7 150 12-162 67-225 (270)
192 2xdw_A Prolyl endopeptidase; a 99.4 8.3E-11 2.8E-15 97.6 19.6 150 13-163 172-372 (710)
193 2bkl_A Prolyl endopeptidase; m 99.4 3.7E-11 1.3E-15 99.5 17.0 146 20-165 76-267 (695)
194 1xip_A Nucleoporin NUP159; bet 99.4 1E-10 3.5E-15 90.6 18.3 127 14-147 90-232 (388)
195 2oiz_A Aromatic amine dehydrog 99.3 1.1E-10 3.7E-15 89.6 17.8 136 21-159 13-182 (361)
196 1mda_H Methylamine dehydrogena 99.3 4.2E-11 1.4E-15 92.3 14.6 164 4-169 59-356 (368)
197 3c75_H MADH, methylamine dehyd 99.3 5.4E-11 1.8E-15 93.3 15.3 161 4-166 112-409 (426)
198 3dsm_A Uncharacterized protein 99.3 1.8E-10 6.3E-15 87.2 16.5 147 14-163 46-216 (328)
199 3dr2_A Exported gluconolactona 99.3 4.5E-10 1.5E-14 84.0 18.2 154 4-160 37-225 (305)
200 2gop_A Trilobed protease; beta 99.3 5E-10 1.7E-14 84.6 17.6 144 13-168 172-339 (347)
201 2z2n_A Virginiamycin B lyase; 99.3 6.6E-09 2.3E-13 76.4 23.1 151 11-164 14-175 (299)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 9.9E-10 3.4E-14 81.7 17.9 145 13-159 118-299 (314)
203 1qks_A Cytochrome CD1 nitrite 99.2 3.2E-09 1.1E-13 86.2 20.8 139 21-160 165-330 (567)
204 3sjl_D Methylamine dehydrogena 99.2 2.2E-09 7.4E-14 83.1 18.2 139 17-159 38-208 (386)
205 3g4e_A Regucalcin; six bladed 99.2 6.5E-09 2.2E-13 77.4 20.4 151 12-164 54-234 (297)
206 2z2n_A Virginiamycin B lyase; 99.2 1.6E-08 5.5E-13 74.4 22.3 149 12-163 57-216 (299)
207 3hrp_A Uncharacterized protein 99.2 3.3E-09 1.1E-13 82.8 18.8 145 13-160 132-299 (409)
208 3hrp_A Uncharacterized protein 99.2 3.7E-09 1.3E-13 82.5 18.9 149 17-166 176-361 (409)
209 3iuj_A Prolyl endopeptidase; h 99.2 1.8E-09 6E-14 89.6 17.5 146 13-161 130-316 (693)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 4.8E-09 1.6E-13 78.0 17.3 149 7-158 13-206 (314)
211 2qc5_A Streptogramin B lactona 99.2 7.5E-08 2.6E-12 70.8 23.5 149 12-163 20-179 (300)
212 3g4e_A Regucalcin; six bladed 99.1 8E-09 2.7E-13 76.9 17.8 135 13-148 99-261 (297)
213 2mad_H Methylamine dehydrogena 99.1 1E-08 3.6E-13 79.1 18.7 139 18-163 27-199 (373)
214 1yr2_A Prolyl oligopeptidase; 99.1 3.9E-09 1.3E-13 88.0 17.4 140 20-160 115-304 (741)
215 3sjl_D Methylamine dehydrogena 99.1 7.3E-09 2.5E-13 80.1 17.6 154 14-167 139-371 (386)
216 2ghs_A AGR_C_1268P; regucalcin 99.1 2.8E-08 9.5E-13 75.1 19.7 138 15-158 52-209 (326)
217 2qc5_A Streptogramin B lactona 99.1 1.2E-07 4.2E-12 69.6 22.8 148 12-162 104-262 (300)
218 2qe8_A Uncharacterized protein 99.0 3.2E-08 1.1E-12 75.2 17.5 150 12-161 67-280 (343)
219 2iwa_A Glutamine cyclotransfer 99.0 6.4E-08 2.2E-12 71.2 17.9 151 14-167 23-189 (266)
220 2ghs_A AGR_C_1268P; regucalcin 99.0 1.6E-07 5.3E-12 70.9 20.2 133 12-148 134-291 (326)
221 2hz6_A Endoplasmic reticulum t 99.0 1E-10 3.5E-15 90.1 2.1 136 22-162 8-152 (369)
222 3c75_H MADH, methylamine dehyd 99.0 7.6E-08 2.6E-12 75.4 18.2 107 21-129 82-220 (426)
223 3dr2_A Exported gluconolactona 99.0 2E-08 6.9E-13 74.9 13.4 131 14-149 133-297 (305)
224 1fwx_A Nitrous oxide reductase 98.9 7.9E-08 2.7E-12 77.7 17.2 146 13-159 135-361 (595)
225 1kb0_A Quinohemoprotein alcoho 98.9 5.1E-08 1.8E-12 80.7 15.9 149 16-164 247-512 (677)
226 1yiq_A Quinohemoprotein alcoho 98.9 9E-08 3.1E-12 79.4 16.8 148 16-163 239-509 (689)
227 3nol_A Glutamine cyclotransfer 98.9 2.9E-07 9.9E-12 67.3 17.1 151 14-168 45-210 (262)
228 2qe8_A Uncharacterized protein 98.9 5.2E-08 1.8E-12 74.0 13.4 143 14-156 122-318 (343)
229 3iuj_A Prolyl endopeptidase; h 98.9 2.4E-07 8.3E-12 76.8 18.1 148 14-165 177-365 (693)
230 2ece_A 462AA long hypothetical 98.9 2.1E-07 7.3E-12 73.0 16.4 133 15-147 191-399 (462)
231 1fwx_A Nitrous oxide reductase 98.8 1.8E-07 6.2E-12 75.6 15.7 147 14-161 197-433 (595)
232 3nok_A Glutaminyl cyclase; bet 98.8 6.1E-07 2.1E-11 65.7 17.1 150 15-168 58-219 (268)
233 2hz6_A Endoplasmic reticulum t 98.8 3E-10 1E-14 87.5 -1.2 143 19-163 45-196 (369)
234 1npe_A Nidogen, entactin; glyc 98.8 1E-05 3.4E-10 59.0 22.4 156 12-168 79-247 (267)
235 2iwa_A Glutamine cyclotransfer 98.8 7.8E-07 2.7E-11 65.4 16.3 137 19-159 71-237 (266)
236 1npe_A Nidogen, entactin; glyc 98.8 1.2E-05 4.2E-10 58.5 22.1 148 13-161 37-200 (267)
237 3tc9_A Hypothetical hydrolase; 98.7 1.1E-06 3.6E-11 69.1 17.0 146 13-159 138-301 (430)
238 3mbr_X Glutamine cyclotransfer 98.7 3.4E-06 1.1E-10 61.1 17.8 149 15-167 24-187 (243)
239 2ece_A 462AA long hypothetical 98.7 1.6E-06 5.4E-11 68.1 16.9 139 21-160 93-290 (462)
240 2fp8_A Strictosidine synthase; 98.7 2.3E-06 8E-11 64.2 17.3 145 14-159 21-216 (322)
241 3nol_A Glutamine cyclotransfer 98.7 1.7E-06 5.9E-11 63.2 15.5 131 14-148 87-244 (262)
242 3nok_A Glutaminyl cyclase; bet 98.6 2.4E-06 8.3E-11 62.5 14.7 129 15-147 97-253 (268)
243 2p9w_A MAL S 1 allergenic prot 98.6 2.8E-05 9.6E-10 58.7 19.5 148 11-159 12-215 (334)
244 2xe4_A Oligopeptidase B; hydro 98.5 2.8E-06 9.7E-11 71.1 15.0 143 13-159 175-354 (751)
245 1kv9_A Type II quinohemoprotei 98.5 6.6E-06 2.3E-10 68.0 15.9 149 16-164 234-493 (668)
246 3mbr_X Glutamine cyclotransfer 98.5 1.4E-05 4.8E-10 57.9 15.0 130 15-148 66-223 (243)
247 2fp8_A Strictosidine synthase; 98.4 3.4E-05 1.2E-09 57.7 17.5 145 14-162 128-316 (322)
248 4hw6_A Hypothetical protein, I 98.4 2.5E-05 8.7E-10 61.3 16.8 144 14-158 141-303 (433)
249 3v64_C Agrin; beta propeller, 98.4 0.0002 6.9E-09 54.5 21.1 151 12-162 73-237 (349)
250 3v65_B Low-density lipoprotein 98.4 0.00016 5.3E-09 55.9 20.0 154 10-163 114-281 (386)
251 3kya_A Putative phosphatase; s 98.4 4.9E-05 1.7E-09 60.6 17.3 146 13-158 140-340 (496)
252 1mda_H Methylamine dehydrogena 98.4 4.4E-06 1.5E-10 64.3 10.7 130 22-159 30-194 (368)
253 2p4o_A Hypothetical protein; p 98.3 0.00033 1.1E-08 52.1 20.5 144 13-158 73-241 (306)
254 1kb0_A Quinohemoprotein alcoho 98.3 6.4E-06 2.2E-10 68.2 11.9 126 21-146 322-537 (677)
255 2ad6_A Methanol dehydrogenase 98.3 4.7E-05 1.6E-09 61.9 16.6 147 17-164 240-499 (571)
256 3q7m_A Lipoprotein YFGL, BAMB; 98.3 2.9E-05 9.8E-10 59.2 14.6 139 22-163 52-211 (376)
257 1w6s_A Methanol dehydrogenase 98.3 6.5E-05 2.2E-09 61.4 17.0 146 17-163 246-507 (599)
258 2p4o_A Hypothetical protein; p 98.3 0.00049 1.7E-08 51.1 20.5 143 13-159 33-198 (306)
259 1flg_A Protein (quinoprotein e 98.2 6.6E-05 2.3E-09 61.1 16.0 147 16-163 250-520 (582)
260 1yiq_A Quinohemoprotein alcoho 98.2 6.3E-05 2.2E-09 62.4 15.4 142 22-164 120-343 (689)
261 3qqz_A Putative uncharacterize 98.2 0.00033 1.1E-08 51.1 17.5 144 12-157 70-251 (255)
262 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00017 5.8E-09 54.9 16.2 135 25-164 145-301 (376)
263 3hxj_A Pyrrolo-quinoline quino 98.2 7.5E-05 2.5E-09 55.5 13.9 127 23-157 107-242 (330)
264 3p5b_L Low density lipoprotein 98.1 0.0015 5.1E-08 50.6 22.8 153 10-162 110-280 (400)
265 2ism_A Putative oxidoreductase 98.1 0.00071 2.4E-08 51.5 18.3 139 4-146 23-220 (352)
266 3v64_C Agrin; beta propeller, 98.1 0.0018 6E-08 49.3 20.0 148 14-162 118-278 (349)
267 1ijq_A LDL receptor, low-densi 98.1 0.0017 5.9E-08 48.5 21.5 151 13-164 78-243 (316)
268 1ijq_A LDL receptor, low-densi 98.0 0.0018 6.3E-08 48.4 21.2 148 13-160 31-196 (316)
269 3tc9_A Hypothetical hydrolase; 98.0 0.00061 2.1E-08 53.4 17.2 144 14-158 228-429 (430)
270 4hw6_A Hypothetical protein, I 98.0 0.00075 2.6E-08 52.9 17.5 144 14-158 230-432 (433)
271 3qqz_A Putative uncharacterize 98.0 0.0019 6.5E-08 47.1 20.6 150 10-160 25-205 (255)
272 1kv9_A Type II quinohemoprotei 98.0 0.00033 1.1E-08 57.9 15.1 142 22-163 116-337 (668)
273 3hxj_A Pyrrolo-quinoline quino 98.0 0.00017 5.8E-09 53.5 12.2 139 15-163 140-287 (330)
274 3sov_A LRP-6, low-density lipo 98.0 0.0028 9.5E-08 47.6 19.8 149 14-163 81-242 (318)
275 3v65_B Low-density lipoprotein 98.0 0.0023 7.9E-08 49.3 18.7 149 14-163 161-322 (386)
276 2xe4_A Oligopeptidase B; hydro 97.9 0.00069 2.4E-08 56.7 16.8 140 15-157 224-398 (751)
277 3sre_A PON1, serum paraoxonase 97.9 0.0034 1.2E-07 47.9 19.2 142 15-159 53-252 (355)
278 1cru_A Protein (soluble quinop 97.9 0.0044 1.5E-07 48.9 20.5 104 4-107 19-163 (454)
279 3a9g_A Putative uncharacterize 97.9 0.00096 3.3E-08 50.9 15.9 139 4-146 21-215 (354)
280 3m0c_C LDL receptor, low-densi 97.9 0.0035 1.2E-07 52.9 20.4 155 11-165 423-595 (791)
281 3sov_A LRP-6, low-density lipo 97.9 0.0039 1.3E-07 46.8 20.2 150 12-161 35-199 (318)
282 3das_A Putative oxidoreductase 97.9 0.0031 1.1E-07 48.0 17.8 142 3-145 23-218 (347)
283 4a2l_A BT_4663, two-component 97.9 0.0072 2.5E-07 50.7 21.6 146 12-162 357-529 (795)
284 3amr_A 3-phytase; beta-propell 97.8 0.0045 1.5E-07 47.1 18.1 152 22-176 39-232 (355)
285 3kya_A Putative phosphatase; s 97.8 0.0013 4.4E-08 52.5 15.5 145 14-160 249-476 (496)
286 3p5b_L Low density lipoprotein 97.8 0.0069 2.4E-07 46.9 22.5 152 12-164 159-325 (400)
287 3pbp_A Nucleoporin NUP82; beta 97.8 0.0081 2.8E-07 46.9 18.7 135 18-154 27-207 (452)
288 4a2l_A BT_4663, two-component 97.8 0.013 4.5E-07 49.1 21.8 142 12-161 406-573 (795)
289 2ad6_A Methanol dehydrogenase 97.7 0.00055 1.9E-08 55.6 12.5 127 21-147 311-525 (571)
290 2p9w_A MAL S 1 allergenic prot 97.7 0.0078 2.7E-07 45.4 19.4 151 13-163 64-269 (334)
291 1flg_A Protein (quinoprotein e 97.7 0.0011 3.7E-08 54.0 13.8 72 74-145 465-545 (582)
292 1tl2_A L10, protein (tachylect 97.7 0.0021 7.3E-08 45.8 13.4 133 13-154 42-205 (236)
293 2g8s_A Glucose/sorbosone dehyd 97.7 0.0016 5.5E-08 49.6 13.8 140 4-145 10-214 (353)
294 1k3i_A Galactose oxidase precu 97.7 0.00035 1.2E-08 57.5 10.5 106 15-120 189-325 (656)
295 4a0p_A LRP6, LRP-6, low-densit 97.6 0.019 6.6E-07 47.2 20.6 148 13-160 38-198 (628)
296 1n7d_A LDL receptor, low-densi 97.6 0.0005 1.7E-08 57.2 10.4 153 14-167 455-622 (699)
297 3m0c_C LDL receptor, low-densi 97.6 0.029 9.9E-07 47.4 21.9 152 13-165 472-638 (791)
298 1n7d_A LDL receptor, low-densi 97.5 0.00057 2E-08 56.8 9.8 153 14-166 408-578 (699)
299 1w6s_A Methanol dehydrogenase 97.5 0.011 3.7E-07 48.3 17.0 147 16-164 110-347 (599)
300 3s94_A LRP-6, low-density lipo 97.4 0.024 8.1E-07 46.5 17.3 154 12-166 84-250 (619)
301 3v9f_A Two-component system se 97.3 0.065 2.2E-06 44.8 20.6 146 12-162 363-527 (781)
302 3s94_A LRP-6, low-density lipo 97.2 0.066 2.3E-06 43.9 20.3 151 12-162 40-205 (619)
303 1k3i_A Galactose oxidase precu 97.1 0.011 3.7E-07 48.6 12.7 104 58-161 190-325 (656)
304 2xbg_A YCF48-like protein; pho 97.0 0.065 2.2E-06 40.1 19.5 140 12-156 163-319 (327)
305 4a0p_A LRP6, LRP-6, low-densit 96.9 0.12 4.2E-06 42.4 20.8 151 13-164 81-242 (628)
306 3v9f_A Two-component system se 96.9 0.14 4.8E-06 42.8 20.5 144 12-161 313-480 (781)
307 3sre_A PON1, serum paraoxonase 96.8 0.07 2.4E-06 40.7 14.2 144 13-156 113-295 (355)
308 3pbp_A Nucleoporin NUP82; beta 96.8 0.033 1.1E-06 43.5 12.3 101 13-114 67-208 (452)
309 3s25_A Hypothetical 7-bladed b 96.8 0.044 1.5E-06 40.8 12.8 138 18-163 59-220 (302)
310 1tl2_A L10, protein (tachylect 96.7 0.097 3.3E-06 37.3 13.4 127 22-155 3-159 (236)
311 3amr_A 3-phytase; beta-propell 96.6 0.15 5.3E-06 38.8 19.9 127 32-158 98-262 (355)
312 3sbq_A Nitrous-oxide reductase 96.5 0.086 2.9E-06 42.7 13.3 102 58-159 327-478 (638)
313 3s25_A Hypothetical 7-bladed b 96.5 0.16 5.4E-06 37.8 16.2 140 19-167 21-184 (302)
314 2vpj_A Kelch-like protein 12; 96.5 0.11 3.7E-06 38.0 13.0 136 22-160 112-279 (301)
315 2xbg_A YCF48-like protein; pho 96.5 0.17 5.9E-06 37.7 19.7 136 13-152 123-272 (327)
316 2ism_A Putative oxidoreductase 96.3 0.24 8.2E-06 37.5 15.3 58 90-148 270-334 (352)
317 2xn4_A Kelch-like protein 2; s 96.2 0.14 4.9E-06 37.3 12.3 135 22-161 108-278 (302)
318 3ii7_A Kelch-like protein 7; p 95.8 0.22 7.6E-06 36.4 11.9 136 22-160 55-226 (306)
319 3ii7_A Kelch-like protein 7; p 95.7 0.31 1.1E-05 35.6 12.3 135 22-160 101-273 (306)
320 4asc_A Kelch repeat and BTB do 95.7 0.22 7.6E-06 36.6 11.4 138 22-161 98-279 (315)
321 1cru_A Protein (soluble quinop 95.7 0.54 1.8E-05 37.0 14.1 93 56-148 29-163 (454)
322 2vpj_A Kelch-like protein 12; 95.6 0.27 9.2E-06 35.8 11.7 137 21-160 61-232 (301)
323 2xn4_A Kelch-like protein 2; s 95.3 0.41 1.4E-05 34.9 11.7 135 22-160 61-230 (302)
324 1zgk_A Kelch-like ECH-associat 95.3 0.35 1.2E-05 35.4 11.3 135 22-161 121-289 (308)
325 2g8s_A Glucose/sorbosone dehyd 95.1 0.75 2.5E-05 34.7 17.7 59 89-147 272-341 (353)
326 3das_A Putative oxidoreductase 95.1 0.67 2.3E-05 35.2 12.5 92 56-147 34-158 (347)
327 2woz_A Kelch repeat and BTB do 95.0 0.61 2.1E-05 34.3 12.0 138 22-161 109-289 (318)
328 2wg3_C Hedgehog-interacting pr 94.9 0.5 1.7E-05 37.3 11.6 38 4-41 6-44 (463)
329 2be1_A Serine/threonine-protei 94.8 0.27 9.1E-06 37.2 9.4 103 24-127 11-139 (339)
330 2xzh_A Clathrin heavy chain 1; 94.7 1.1 3.6E-05 34.1 18.9 146 11-159 151-332 (365)
331 1zgk_A Kelch-like ECH-associat 94.5 0.56 1.9E-05 34.3 10.6 134 22-160 70-241 (308)
332 2uvk_A YJHT; unknown function, 94.0 0.96 3.3E-05 33.7 11.1 133 33-167 168-350 (357)
333 2zwa_A Leucine carboxyl methyl 94.0 1.5 5.2E-05 36.4 13.1 147 15-161 444-637 (695)
334 4asc_A Kelch repeat and BTB do 93.9 1.4 4.7E-05 32.3 12.8 139 19-160 42-222 (315)
335 1bpo_A Protein (clathrin); cla 93.6 2.2 7.4E-05 33.7 21.2 146 11-159 150-331 (494)
336 2woz_A Kelch repeat and BTB do 93.3 1.6 5.3E-05 32.0 11.1 138 19-159 53-231 (318)
337 2be1_A Serine/threonine-protei 92.1 3 0.0001 31.5 13.8 99 22-123 110-236 (339)
338 3sbq_A Nitrous-oxide reductase 92.0 0.62 2.1E-05 37.9 7.6 69 91-159 326-408 (638)
339 3a9g_A Putative uncharacterize 90.9 4.1 0.00014 30.7 19.5 59 89-147 260-330 (354)
340 2zwa_A Leucine carboxyl methyl 90.8 6.3 0.00021 32.7 14.2 141 21-161 396-579 (695)
341 3zwu_A Alkaline phosphatase PH 89.3 3.1 0.0001 34.0 9.5 57 15-71 479-548 (592)
342 4a9v_A PHOX; hydrolase, beta-p 89.0 3.6 0.00012 33.5 9.6 60 88-147 476-549 (592)
343 4fhn_B Nucleoporin NUP120; pro 88.8 3.1 0.00011 36.6 9.9 36 90-125 240-275 (1139)
344 4gq2_M Nucleoporin NUP120; bet 88.6 6 0.0002 34.2 11.3 37 89-125 237-273 (950)
345 2wg3_C Hedgehog-interacting pr 88.0 8.4 0.00029 30.3 14.5 94 57-150 17-160 (463)
346 3zwu_A Alkaline phosphatase PH 86.9 3.9 0.00013 33.4 8.7 58 90-147 478-549 (592)
347 2uvk_A YJHT; unknown function, 86.1 8.5 0.00029 28.4 12.3 85 22-108 19-128 (357)
348 4a9v_A PHOX; hydrolase, beta-p 84.8 8.2 0.00028 31.4 9.5 58 14-71 478-548 (592)
349 4gq2_M Nucleoporin NUP120; bet 84.8 1.9 6.7E-05 37.2 6.3 40 11-50 235-274 (950)
350 1xi4_A Clathrin heavy chain; a 83.3 28 0.00094 32.0 13.6 145 12-157 151-329 (1630)
351 3ott_A Two-component system se 81.7 21 0.00072 29.5 20.0 139 13-160 64-221 (758)
352 1xi4_A Clathrin heavy chain; a 80.9 22 0.00074 32.6 11.2 99 17-119 71-189 (1630)
353 2xzh_A Clathrin heavy chain 1; 80.9 16 0.00056 27.7 17.3 132 32-169 48-199 (365)
354 3ei3_A DNA damage-binding prot 79.0 34 0.0012 30.3 16.1 122 34-158 493-635 (1158)
355 4fhn_B Nucleoporin NUP120; pro 79.0 2.3 7.8E-05 37.5 4.7 36 15-50 241-276 (1139)
356 3ott_A Two-component system se 78.8 27 0.00091 28.9 19.6 143 13-160 374-546 (758)
357 3f7f_A Nucleoporin NUP120; nuc 78.1 3.3 0.00011 34.6 5.2 31 21-51 229-259 (729)
358 1bpo_A Protein (clathrin); cla 77.1 26 0.00087 27.8 19.8 34 131-164 261-294 (494)
359 4h3o_A Lectin; cadmium, plant 72.8 13 0.00045 22.5 9.5 45 58-104 54-98 (105)
360 3f7f_A Nucleoporin NUP120; nuc 71.2 9.2 0.00031 32.0 6.1 30 97-126 229-258 (729)
361 3ei3_A DNA damage-binding prot 70.0 59 0.002 28.9 20.8 71 12-82 554-634 (1158)
362 3uc1_A DNA gyrase subunit A; D 68.4 34 0.0012 25.5 17.0 147 10-156 94-276 (327)
363 3mez_B Mannose-specific lectin 64.7 22 0.00074 21.8 9.9 25 58-84 60-84 (113)
364 3mez_A Mannose-specific lectin 58.2 29 0.00099 21.2 8.1 43 58-104 23-65 (111)
365 1suu_A DNA gyrase subunit A; t 50.4 72 0.0025 23.4 17.9 137 21-157 6-179 (312)
366 3no0_A DNA gyrase subunit A; D 44.8 85 0.0029 22.6 15.4 135 22-157 34-194 (276)
367 1b2p_A Protein (lectin); manno 44.7 53 0.0018 20.2 11.7 44 58-103 64-107 (119)
368 3dzw_A Agglutinin; lectin, man 44.6 50 0.0017 19.9 10.1 25 58-84 53-77 (109)
369 1zvt_A Topoisomerase IV subuni 43.2 87 0.003 22.3 14.3 70 89-158 85-162 (256)
370 3r0e_B Lectin; carbohydrate bi 39.9 62 0.0021 19.6 9.5 25 58-84 57-81 (110)
371 1wp5_A Topoisomerase IV; broke 38.4 1.2E+02 0.0041 22.4 15.7 136 21-157 3-172 (323)
372 3no0_A DNA gyrase subunit A; D 36.2 1.2E+02 0.004 21.8 20.2 135 22-157 79-244 (276)
373 3l6v_A GYRA, DNA gyrase subuni 35.1 1.5E+02 0.005 22.5 17.4 135 21-156 5-177 (370)
374 1q47_A Semaphorin 3A; beta pro 34.2 1.3E+02 0.0045 23.8 6.8 54 101-154 423-487 (495)
375 3a0c_A Mannose/sialic acid-bin 31.4 87 0.003 18.8 11.2 44 58-103 54-97 (110)
376 2loj_A Putative cytoplasmic pr 29.0 76 0.0026 17.4 3.6 28 118-145 35-62 (63)
377 3izo_F Fiber; pentameric pento 26.2 2.1E+02 0.0074 23.3 6.7 30 89-120 455-484 (581)
378 2jra_A Protein RPA2121; domain 25.7 93 0.0032 17.3 3.8 28 118-145 39-66 (67)
379 3r0e_A Lectin; carbohydrate bi 25.3 1.2E+02 0.004 18.3 8.0 41 58-104 24-64 (109)
380 1suu_A DNA gyrase subunit A; t 23.8 2.1E+02 0.0074 20.8 17.7 94 64-157 113-229 (312)
381 3mez_B Mannose-specific lectin 23.6 1.3E+02 0.0044 18.2 10.6 78 58-145 27-104 (113)
382 2dpf_A Curculin; sweet taste, 23.0 1.3E+02 0.0045 18.1 11.3 85 58-159 23-107 (115)
383 4hvt_A Ritya.17583.B, post-pro 22.9 67 0.0023 26.8 3.4 32 15-46 132-169 (711)
384 1zi0_A DNA gyrase subunit A; b 22.4 2.3E+02 0.0078 20.6 17.7 137 21-157 1-174 (307)
385 3q6k_A 43.2 kDa salivary prote 21.6 2.7E+02 0.0093 21.2 17.7 147 13-159 88-306 (381)
386 4gz8_A Semaphorin-3A; multi-do 20.8 2.6E+02 0.0088 23.2 6.4 54 101-154 431-495 (667)
387 3nvq_A Semaphorin-7A; beta-pro 20.8 2.9E+02 0.01 22.5 6.7 54 101-154 382-444 (590)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.98 E-value=2.1e-30 Score=196.67 Aligned_cols=154 Identities=37% Similarity=0.704 Sum_probs=140.5
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.+++|+|+|++|++|+.|++|++||+++++.+..+..+...+.+++|+|++++|++++.|+.|++||++.
T Consensus 158 ~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 158 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 34445556689999999999999999999999999999999888887777788999999999999999999999999874
Q ss_pred --------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 85 --------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 85 --------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. |...|++++|+|++++|++++.|+.|++|
T Consensus 238 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 238 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 477889999999999999999999999999999998888775 88899999999999999999999999999
Q ss_pred eCC
Q psy10953 156 SYK 158 (181)
Q Consensus 156 ~~~ 158 (181)
+..
T Consensus 318 d~p 320 (321)
T 3ow8_A 318 DCP 320 (321)
T ss_dssp ECC
T ss_pred eCC
Confidence 963
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.98 E-value=2e-30 Score=195.10 Aligned_cols=160 Identities=25% Similarity=0.404 Sum_probs=141.7
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
....+..+...+.+++|+|+|++|++++.|++|++||+.+++....+..+...+.+++|+|++++|++++.|+.|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 34456667778999999999999999999999999999999988888888888889999999999999999999999999
Q ss_pred CC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee-eeee-cCCcEEEEEEcc-CCCEEEEEcCCCc
Q psy10953 83 NT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM-HTFK-HADQVWCVCVAP-DGDKFVSVGEDKA 151 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~-~~~~v~~~~~sp-~g~~l~~~~~d~~ 151 (181)
.+ +|...|.+++|+|+++++++++.|++|++||++++..+ ..+. |...|.+++|+| +++.|++++.|+.
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 75 47788999999999999999999999999999876433 3443 788899999999 6789999999999
Q ss_pred EEEEeCCCCee
Q psy10953 152 VHMYSYKPEEE 162 (181)
Q Consensus 152 v~i~~~~~~~~ 162 (181)
|++|++..+..
T Consensus 165 v~iwd~~~~~~ 175 (304)
T 2ynn_A 165 VKVWSLGQSTP 175 (304)
T ss_dssp EEEEETTCSSC
T ss_pred EEEEECCCCCc
Confidence 99999976543
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.98 E-value=4.5e-30 Score=194.91 Aligned_cols=166 Identities=43% Similarity=0.742 Sum_probs=149.1
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
++..+..++..++.++|+|++++|++++.|++|++|++++++....+..+...+.+++|+|++++|++++.|+.|++||+
T Consensus 114 ~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~ 193 (321)
T 3ow8_A 114 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 193 (321)
T ss_dssp EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 34555666777889999999999999999999999999999988888888888889999999999999999999999998
Q ss_pred CC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 83 NT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
.+ +|...|.+++|+|++++|++++.|+.|++||++.+.....+. |...|.+++|+|++++|++++.|+.|+
T Consensus 194 ~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 194 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp TTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 74 467789999999999999999999999999999888777765 788899999999999999999999999
Q ss_pred EEeCCCCeeEEEcCC
Q psy10953 154 MYSYKPEEEVEVNGG 168 (181)
Q Consensus 154 i~~~~~~~~~~~~~~ 168 (181)
+|++.++..+....+
T Consensus 274 iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 274 VWDVGTRTCVHTFFD 288 (321)
T ss_dssp EEETTTTEEEEEECC
T ss_pred EEeCCCCEEEEEEcC
Confidence 999998887765544
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=193.68 Aligned_cols=159 Identities=14% Similarity=0.119 Sum_probs=138.4
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEEEeCCCC--
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINIFDANTG-- 85 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d~~~~-- 85 (181)
.+...|.+++|+|+|++|++|+.|++|++||+++++.+..+..|...+.+++|++++. +|++++.|+.|++||++++
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce
Confidence 4566789999999999999999999999999999999999988888899999999985 6889999999999999754
Q ss_pred --------CcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCC-CEEEEEcCCCcEEE
Q psy10953 86 --------HSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDG-DKFVSVGEDKAVHM 154 (181)
Q Consensus 86 --------~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g-~~l~~~~~d~~v~i 154 (181)
+...+.+++|+|+ ++++++++.|+.|++||+++++.+..+. |...|++++|+|++ ++|++++.|+.|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV 284 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEE
Confidence 2345789999995 5689999999999999999998888776 88899999999998 57899999999999
Q ss_pred EeCCCCeeEEEcC
Q psy10953 155 YSYKPEEEVEVNG 167 (181)
Q Consensus 155 ~~~~~~~~~~~~~ 167 (181)
||+.+++.+...+
T Consensus 285 wd~~~~~~~~~~~ 297 (344)
T 4gqb_B 285 LDSSLSELFRSQA 297 (344)
T ss_dssp ECTTCCEEEEECC
T ss_pred EECCCCcEEEEcC
Confidence 9999887665543
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=5.1e-29 Score=187.45 Aligned_cols=167 Identities=23% Similarity=0.429 Sum_probs=145.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cEEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG-KLEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~ 80 (181)
.+..+..+...+.+++|+|++++|++|+.|++|++||++++ .....+..|...+.+++|+| ++..|++++.|+.|++|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 45566778888999999999999999999999999999877 44566777888888999999 67899999999999999
Q ss_pred eCCC---------CCcccEEEEEEcC--CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcC
Q psy10953 81 DANT---------GHSSWVLSTAFTR--DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 81 d~~~---------~~~~~v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
|+.. ++...+..+.|+| ++++|++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp ETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred ECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcC
Confidence 9864 3445678888887 67899999999999999999998888876 8889999999999999999999
Q ss_pred CCcEEEEeCCCCeeEEEcCCC
Q psy10953 149 DKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 149 d~~v~i~~~~~~~~~~~~~~~ 169 (181)
|+.|++|+..+++.+.....+
T Consensus 249 Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 249 DGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp TSCEEEEETTTCCEEEEECCS
T ss_pred CCeEEEEECCCCceeeeccCC
Confidence 999999999988776655443
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.4e-29 Score=187.82 Aligned_cols=164 Identities=22% Similarity=0.374 Sum_probs=146.8
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.+++|+|+|++|++|+.|++|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||++
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 45566777889999999999999999999999999999999998888888888999999999999999999999999986
Q ss_pred C-------CCcccEEEEEEcCC------CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCC
Q psy10953 84 T-------GHSSWVLSTAFTRD------GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 84 ~-------~~~~~v~~~~~s~~------~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
. +|...|..+.|+|. +..+++++.|+.|++||+.+.+....+. |...|++++|+|+|++|++++.|
T Consensus 138 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d 217 (319)
T 3frx_A 138 GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217 (319)
T ss_dssp SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 3 57788999999995 4489999999999999999887776664 88899999999999999999999
Q ss_pred CcEEEEeCCCCeeEEEcC
Q psy10953 150 KAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 150 ~~v~i~~~~~~~~~~~~~ 167 (181)
+.|++|++..++.+....
T Consensus 218 g~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 218 GEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp CEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCcEEEEec
Confidence 999999999887665443
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=3e-29 Score=191.43 Aligned_cols=154 Identities=20% Similarity=0.390 Sum_probs=139.7
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+..+...+.+++|+|+++++++|+.|++|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 34556667778999999999999999999999999999999998888888888889999999999999999999999998
Q ss_pred CCC----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 83 NTG----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 83 ~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
+.+ +...|.+++|+|+|+++++++.|+.|++||+.++..+..+. |...|.+++|+|+|++|++++.|+.
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 753 22368999999999999999999999999999888777775 8889999999999999999999999
Q ss_pred EEEEe
Q psy10953 152 VHMYS 156 (181)
Q Consensus 152 v~i~~ 156 (181)
|++|+
T Consensus 336 i~iWd 340 (340)
T 1got_B 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99996
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=4e-29 Score=195.38 Aligned_cols=161 Identities=24% Similarity=0.372 Sum_probs=146.9
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~- 84 (181)
.+..+...+.+++|+|++++|++|+.|++|++||+.+++....+..|...+.+++|+|++++|++++.|+.|++||+.+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4556777899999999999999999999999999999999888888888889999999999999999999999999864
Q ss_pred -------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 85 -------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 85 -------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+|...|.+++|+|+++++++++.|+.|++||+.++..+..+. |...+.+++++|+|+++++++.|+.|++|+
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 477889999999999999999999999999999998887776 778899999999999999999999999999
Q ss_pred CCCCeeEEEc
Q psy10953 157 YKPEEEVEVN 166 (181)
Q Consensus 157 ~~~~~~~~~~ 166 (181)
+.+++.....
T Consensus 263 ~~~~~~~~~~ 272 (410)
T 1vyh_C 263 VATKECKAEL 272 (410)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCceeeEe
Confidence 9887665444
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.8e-28 Score=184.34 Aligned_cols=162 Identities=24% Similarity=0.413 Sum_probs=146.9
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.+++|+|+|++|++++.|++|++|++.+++....+..+...+.+++|+|++++|++++.|+.+++||+.+
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 44566778899999999999999999999999999999999888888888888999999999999999999999999975
Q ss_pred --------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 85 --------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 85 --------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
+|...|.+++|+|+++++++++.|+.|++||+++++.+..+. |...+.+++|+|+++++++++.|+.|++|
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 176 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 176 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 366789999999999999999999999999999988877775 77889999999999999999999999999
Q ss_pred eCCCCeeEEEc
Q psy10953 156 SYKPEEEVEVN 166 (181)
Q Consensus 156 ~~~~~~~~~~~ 166 (181)
++.+++.+...
T Consensus 177 d~~~~~~~~~~ 187 (312)
T 4ery_A 177 DTASGQCLKTL 187 (312)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCceeeEE
Confidence 99888766543
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.8e-28 Score=187.06 Aligned_cols=165 Identities=24% Similarity=0.462 Sum_probs=147.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
....+..+...+++++|+|++++|++|+.|++|++||+.+++....+..+...+.+++|+|++++|++++.|+.+++|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 44567778888999999999999999999999999999999988888888888889999999999999999999999998
Q ss_pred CC------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCC
Q psy10953 83 NT------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 83 ~~------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
.+ +|...+.++.|+++++ +++++.|+.|++||+.+++.+..+. |...|++++|+|+++++++++.|
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 64 3667889999999876 7889999999999999998887776 88899999999999999999999
Q ss_pred CcEEEEeCCCCeeEEEcCC
Q psy10953 150 KAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 150 ~~v~i~~~~~~~~~~~~~~ 168 (181)
+.|++|++.++..+....+
T Consensus 206 ~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp SCEEEEETTTCSEEEEECC
T ss_pred CcEEEEECCCCeeEEEEcC
Confidence 9999999988876655443
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=2.6e-28 Score=187.40 Aligned_cols=167 Identities=23% Similarity=0.403 Sum_probs=148.9
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+....+..+...+++++|+|++++|++|+.|++|++||..+++....+..+...+.+++|+|+|..+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34566778888999999999999999999999999999999998888877777788999999999999999999999999
Q ss_pred CCC--------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc--CCCEEE
Q psy10953 82 ANT--------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP--DGDKFV 144 (181)
Q Consensus 82 ~~~--------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp--~g~~l~ 144 (181)
+.. +|...|.+++|+|+++.+++++.|++|++||+.+++.+..+. |...|.+++++| +|++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 853 266789999999999999999999999999999998888876 788899999987 578999
Q ss_pred EEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 145 SVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+++.|+.|++||+.+++.+....+
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~ 238 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFET 238 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC
T ss_pred EEeCCCeEEEEECCCCcEEEEecC
Confidence 999999999999998877665544
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=8.3e-29 Score=190.42 Aligned_cols=156 Identities=22% Similarity=0.238 Sum_probs=126.2
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEEEeCCC---
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINIFDANT--- 84 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d~~~--- 84 (181)
.+...+.+++|+|+|++|++|+.|++|++||+++++....+..+...+.+++|++++. .+++++.|+.|++||+++
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 3456689999999999999999999999999999988877776666666777777663 566667777777776531
Q ss_pred --------------------------------------------------CCcccEEEEEEcCCC-CEEEEEeCCCcEEE
Q psy10953 85 --------------------------------------------------GHSSWVLSTAFTRDG-KFFISASADHTVRV 113 (181)
Q Consensus 85 --------------------------------------------------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v 113 (181)
+|...|.+++|+|++ ++|++++.|++|++
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 244568889999987 57899999999999
Q ss_pred EecCCCceeeeeecCCcEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 114 WNFARRENMHTFKHADQVWCVCVAP-DGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 114 ~d~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
||+.+++.+..+.|.+.|++++|+| ++++|++++.|+.|++|++....+..
T Consensus 297 wd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 297 LDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp ECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred EECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 9999988888778999999999998 79999999999999999997654443
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=7.9e-29 Score=189.50 Aligned_cols=160 Identities=21% Similarity=0.424 Sum_probs=137.5
Q ss_pred cceeeeccCee-eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE--E-EecCCceEEEEEECCCCCEEEEeeCCCcE
Q psy10953 2 KQISKINVGPV-DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ--I-FDTRGKFTLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~--~-~~~~~~~~~~~~~s~d~~~l~~~~~d~~v 77 (181)
..+..+..++. .++.++|+|+|++|++|+.|++|++||+.+++... . ...|...+.+++|+|++++|++++.|+.+
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 35666777777 79999999999999999999999999998876432 2 23466778899999999999999999999
Q ss_pred EEEeCCC----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce---eeee-ecCCcEEEEEEccCCCEE
Q psy10953 78 NIFDANT----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN---MHTF-KHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 78 ~i~d~~~----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~-~~~~~v~~~~~sp~g~~l 143 (181)
++||... +|...|.+++|+|++++|++++.|+.|++||+..... +..+ .|...|.+++|+|++++|
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 9998753 5778899999999999999999999999999987643 3333 377889999999999999
Q ss_pred EEEcCCCcEEEEeCCCCe
Q psy10953 144 VSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~~~ 161 (181)
++++.|+.|++|+...+.
T Consensus 166 ~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDD 183 (345)
T ss_dssp EEEETTSCEEEEEEETTE
T ss_pred EEEeCCCcEEEEEecCCC
Confidence 999999999999987764
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=2e-28 Score=191.45 Aligned_cols=166 Identities=22% Similarity=0.371 Sum_probs=148.5
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+..+...+.+++|+|+++++++|+.|++|++||+++++....+..+...+.++.++|++++|++++.|+.|++||+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 35566677788999999999999999999999999999999999888888888889999999999999999999999998
Q ss_pred CC--------CCcccEEEEEEcCC--------------------CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEE
Q psy10953 83 NT--------GHSSWVLSTAFTRD--------------------GKFFISASADHTVRVWNFARRENMHTFK-HADQVWC 133 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~--------------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~ 133 (181)
.+ +|...|.+++|+|+ |.++++++.|+.|++||++++..+..+. |...|++
T Consensus 264 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~ 343 (410)
T 1vyh_C 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343 (410)
T ss_dssp TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEE
Confidence 74 46778999999996 6789999999999999999998887775 7888999
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
++|+|+|++|++++.|+.|++|++.+++.+....+
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 99999999999999999999999988766554433
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=8.5e-28 Score=180.69 Aligned_cols=165 Identities=23% Similarity=0.445 Sum_probs=147.2
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.+++|+|++++|++++.|++|++||+++++....+..+...+.++.|+|++++|++++.|+.+++||++
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 34556677789999999999999999999999999999999988888888888899999999999999999999999997
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
++ |...|.+++|+|+++++++++.|+.|++||+++++.+..+. +...+..++|+|+++++++++.|+.|+
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 217 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 217 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEE
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 53 56789999999999999999999999999999888776653 456789999999999999999999999
Q ss_pred EEeCCCCeeEEEcCC
Q psy10953 154 MYSYKPEEEVEVNGG 168 (181)
Q Consensus 154 i~~~~~~~~~~~~~~ 168 (181)
+|++..+..+....+
T Consensus 218 iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 218 LWDYSKGKCLKTYTG 232 (312)
T ss_dssp EEETTTTEEEEEECS
T ss_pred EEECCCCcEEEEEEe
Confidence 999998877765544
No 16
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=9.7e-29 Score=190.62 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=122.6
Q ss_pred eeEEEEEEcCCCCEEEE--EeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 12 VDMWNVVFSPDDKYVLS--GSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~--~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
..+..++|||||+++++ ++.|++|++||+++++.+..+.++ ..+.+++|+|||+++++++.++.+.+|+...
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-GEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIAR 212 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-SCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-CceEEEEEccCCceEEeccceeEEEEEeccCcceee
Confidence 34788999999999865 447899999999999988877644 4467899999999998888665444443210
Q ss_pred ------------------------------------------------------CCcccEEEEEEcCCCCEEEEEeCCCc
Q psy10953 85 ------------------------------------------------------GHSSWVLSTAFTRDGKFFISASADHT 110 (181)
Q Consensus 85 ------------------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~ 110 (181)
+|...|.+++|+|+|++|++++.|++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 12345788999999999999999999
Q ss_pred EEEEecCCCceeeee-e-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 111 VRVWNFARRENMHTF-K-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 111 i~v~d~~~~~~~~~~-~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
|++||+.+++.+..+ . |...|++++|||||++|+++|.|++|+||++.+.
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999988876 3 8899999999999999999999999999999643
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.5e-28 Score=198.66 Aligned_cols=162 Identities=25% Similarity=0.400 Sum_probs=142.1
Q ss_pred eeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
..+..+...+.+++|+|++. +|++|+.|++|++||..+++....+..|...+.+++|+|||++|++++.|+.|++||+.
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 34556777899999999987 59999999999999999999888888888889999999999999999999999999974
Q ss_pred C---------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-----------------------
Q psy10953 84 T---------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF----------------------- 125 (181)
Q Consensus 84 ~---------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----------------------- 125 (181)
+ +|...|.+++|+|+|++|++++.|++|++||+.+++.+..+
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 2 57788999999999999999999999999999876543321
Q ss_pred ---------------------ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 126 ---------------------KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 126 ---------------------~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
.|...|++++|+|+|++|++++.|+.|++|++.+++.....
T Consensus 301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF 362 (611)
T ss_dssp ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS
T ss_pred eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeec
Confidence 26678999999999999999999999999999887665543
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=6.6e-28 Score=184.05 Aligned_cols=153 Identities=22% Similarity=0.352 Sum_probs=136.1
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.+++|+|++.++++++.|++|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||+..
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 44566777899999999999999999999999999999999888888888889999999999999999999999999852
Q ss_pred ----------CCcccEEEEEEcCCC----------CEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEE
Q psy10953 85 ----------GHSSWVLSTAFTRDG----------KFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 85 ----------~~~~~v~~~~~s~~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l 143 (181)
+|...|.+++|+|++ .++++++.|+.|++||.. ......+ .|...|.+++|+|+|++|
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l 228 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYI 228 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEE
Confidence 467789999999987 789999999999999954 4444444 478899999999999999
Q ss_pred EEEcCCCcEEEEeCC
Q psy10953 144 VSVGEDKAVHMYSYK 158 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~ 158 (181)
++++.|+.|++|++.
T Consensus 229 ~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 229 ATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEETTCEEEEEESS
T ss_pred EEEcCCCeEEEEECC
Confidence 999999999999983
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.6e-28 Score=183.02 Aligned_cols=165 Identities=25% Similarity=0.427 Sum_probs=134.2
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEE-ec-CCceEEEEEECCCCCEEEEeeCCCcE
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIF-DT-RGKFTLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~-~~-~~~~~~~~~~s~d~~~l~~~~~d~~v 77 (181)
+.+..+..+...+++++|+|+ +|++|+.|++|++||+.++. ....+ .. |...+.+++|+|++++|++++.|+.|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 356677788889999999988 99999999999999998753 34444 23 66678899999999999999999999
Q ss_pred EEEeCC---------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC----ceeeeee-cCCcEEEEEEc
Q psy10953 78 NIFDAN---------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR----ENMHTFK-HADQVWCVCVA 137 (181)
Q Consensus 78 ~i~d~~---------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~-~~~~v~~~~~s 137 (181)
++||+. .+|...|.+++|+|+|++|++++.|+.|++||+... +.+..+. |...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 999983 246778999999999999999999999999999532 3344444 77889999999
Q ss_pred cCCCEEEEEcCCCcEEEEeCCCC--eeEEEcCC
Q psy10953 138 PDGDKFVSVGEDKAVHMYSYKPE--EEVEVNGG 168 (181)
Q Consensus 138 p~g~~l~~~~~d~~v~i~~~~~~--~~~~~~~~ 168 (181)
|++++|++++.|+.|++|+...+ +.+....+
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~ 195 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNG 195 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC
Confidence 99999999999999999998765 34444433
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.7e-27 Score=182.89 Aligned_cols=164 Identities=21% Similarity=0.294 Sum_probs=143.1
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC--CCCEEEEeeCCCcEEEEeCC
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST--DGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i~d~~ 83 (181)
.+..+...+.+++|+|+++.|++++.|++|++||+++++.+..+..|...+.++.++| ++++|++++.|+.|++||++
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 3444666789999999999999999999999999999999988888888788888877 57899999999999999987
Q ss_pred C--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec---CCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 84 T--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH---ADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
+ +|...|.+++|+|++++|++++.|+.|++||++....+..+.. ...+.+++|+|+|+++++++.|+.|
T Consensus 229 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i 308 (354)
T 2pbi_B 229 SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 308 (354)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcE
Confidence 5 4677899999999999999999999999999998876665542 2468899999999999999999999
Q ss_pred EEEeCCCCeeEEEcCCC
Q psy10953 153 HMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 153 ~i~~~~~~~~~~~~~~~ 169 (181)
++|++.++..+....+.
T Consensus 309 ~vwd~~~~~~~~~l~~h 325 (354)
T 2pbi_B 309 NVWDVLKGSRVSILFGH 325 (354)
T ss_dssp EEEETTTCSEEEEECCC
T ss_pred EEEECCCCceEEEEECC
Confidence 99999888877665543
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=7.6e-28 Score=184.48 Aligned_cols=158 Identities=22% Similarity=0.259 Sum_probs=134.5
Q ss_pred ceeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCC-CCEEEEeeCCCcEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTD-GHWIASGALDGIIN 78 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d-~~~l~~~~~d~~v~ 78 (181)
.+..+..+...+.+++|+|++. ++++++.|++|++||+++++....+.. ++..+.+++|+|+ +++|++|+.|+.|+
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 4566777888899999999985 678999999999999999988776543 3445678999995 56788999999999
Q ss_pred EEeCCC--------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCC-EEEEEcC
Q psy10953 79 IFDANT--------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGD-KFVSVGE 148 (181)
Q Consensus 79 i~d~~~--------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~ 148 (181)
+||+++ +|...|.+++|+|++ ++|++++.|++|++||+.+++......|.+.|++++|+|+++ +|+++|.
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~ 320 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGW 320 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcC
Confidence 999974 477889999999998 589999999999999999988776666999999999999987 4678999
Q ss_pred CCcEEEEeCCCC
Q psy10953 149 DKAVHMYSYKPE 160 (181)
Q Consensus 149 d~~v~i~~~~~~ 160 (181)
|+.|++|++.++
T Consensus 321 D~~v~~w~v~~~ 332 (344)
T 4gqb_B 321 DHQVVHHVVPTE 332 (344)
T ss_dssp TSCEEEEECCC-
T ss_pred CCeEEEEECCCC
Confidence 999999999764
No 22
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.4e-27 Score=178.97 Aligned_cols=158 Identities=25% Similarity=0.337 Sum_probs=135.3
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CcEEEEEecCCceEEEEEECCC--CCEEEEeeCCCcEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET--GKLEQIFDTRGKFTLSIAYSTD--GHWIASGALDGIINI 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~v~i 79 (181)
+..+..+...+++++|+|+|++|++|+.|++|++||+.+ .+....+..|...+.+++|+++ +++|++++.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 456677888899999999999999999999999999974 3566777778888899999874 899999999999999
Q ss_pred EeCCCC----------CcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCce--eeee-ecCCcEEEEEEccC-----
Q psy10953 80 FDANTG----------HSSWVLSTAFTRD--GKFFISASADHTVRVWNFARREN--MHTF-KHADQVWCVCVAPD----- 139 (181)
Q Consensus 80 ~d~~~~----------~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~--~~~~-~~~~~v~~~~~sp~----- 139 (181)
||+.++ |...|.+++|+|+ +++|++++.|+.|++||++.... ...+ .|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 998643 5678999999998 89999999999999999987532 2223 47788999999997
Q ss_pred --------CCEEEEEcCCCcEEEEeCCCCe
Q psy10953 140 --------GDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 140 --------g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+++|++++.|+.|++|++..+.
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTT
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 5799999999999999987654
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-27 Score=180.66 Aligned_cols=151 Identities=21% Similarity=0.357 Sum_probs=127.4
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET-------GKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+...+.+++|+|++++|++|+.|++|++||+.. .+....+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 666799999999999999999999999999853 2445566677778889999999999999999999999998
Q ss_pred C------------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC--ceeeeee-cCCcEEEEEEccC--CCEEEE
Q psy10953 83 N------------TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR--ENMHTFK-HADQVWCVCVAPD--GDKFVS 145 (181)
Q Consensus 83 ~------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~-~~~~v~~~~~sp~--g~~l~~ 145 (181)
. .+|...|.+++|+|++++|++++.|+.|++||..++ +.+..+. |...|++++|+|+ +..+++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 3 246778999999999999999999999999998765 4555554 8889999999999 778999
Q ss_pred EcCCCcEEEEeCCCC
Q psy10953 146 VGEDKAVHMYSYKPE 160 (181)
Q Consensus 146 ~~~d~~v~i~~~~~~ 160 (181)
++.|+.|++|++..+
T Consensus 217 ~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 217 GSDDSTVRVWKYMGD 231 (330)
T ss_dssp EETTSCEEEEEEEEE
T ss_pred EeCCCeEEEEEecCC
Confidence 999999999998543
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=5.8e-28 Score=186.91 Aligned_cols=165 Identities=23% Similarity=0.494 Sum_probs=133.5
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC-
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA- 82 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~- 82 (181)
...+..+...|++++|+|++++|++|+.|++|++||..+++....+..+...+.+++|+|+|++|++++.|+.+++||+
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 4557778888999999999999999999999999999999888877777666667778877776666666655555553
Q ss_pred -------------------------------------------------CC-------------CCcccEEEEEEcC-CC
Q psy10953 83 -------------------------------------------------NT-------------GHSSWVLSTAFTR-DG 99 (181)
Q Consensus 83 -------------------------------------------------~~-------------~~~~~v~~~~~s~-~~ 99 (181)
.+ +|...|.++.|+| ++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 21 2334567778876 78
Q ss_pred CEEEEEeCCCcEEEEecCC-Cceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 100 KFFISASADHTVRVWNFAR-RENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 100 ~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+++++++.|+.|++||++. ...+..+. |...|++++|+|++++|++++.|+.|++||+.++..+.....
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 8999999999999999974 35555554 888999999999999999999999999999999888766554
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=3.3e-27 Score=192.93 Aligned_cols=163 Identities=21% Similarity=0.348 Sum_probs=134.6
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEec------------------------------
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDT------------------------------ 51 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~------------------------------ 51 (181)
+..+..+...+.+++|+|||++||+|+.|++|++||+.+++ ....+..
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 44566677789999999999999999999999999986432 2222221
Q ss_pred --------------CCceEEEEEECCCCC-EEEEeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCC
Q psy10953 52 --------------RGKFTLSIAYSTDGH-WIASGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASAD 108 (181)
Q Consensus 52 --------------~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d 108 (181)
|...+.+++|+|++. .|++++.|+.+++||... +|...|.+++|+|+|++|++++.|
T Consensus 132 ~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 132 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp EETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECC
Confidence 223455677777775 588899999999999763 588899999999999999999999
Q ss_pred CcEEEEecCCCceeeee--------ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 109 HTVRVWNFARRENMHTF--------KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 109 ~~i~v~d~~~~~~~~~~--------~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
+.|++||+.+++....+ .|.+.|++++|+|+|++|++++.|+.|++|++.+++.+...
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 99999999988777665 47889999999999999999999999999999988766544
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=182.67 Aligned_cols=150 Identities=19% Similarity=0.359 Sum_probs=131.5
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~- 84 (181)
..+...+.+++|+|+|++|++|+.|+++++||+.+++ ....+..|...+.+++|+|++++|++++.|+.|++||+..
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 4566779999999999999999999999999998775 3456667777888999999999999999999999999863
Q ss_pred ----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee--eeee-cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 85 ----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM--HTFK-HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 85 ----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
+|...|.+++|+|++++|++++.|+.|++||...+... ..+. |...|++++|+|+|++|++++.|+.
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 36677999999999999999999999999999876533 3443 7889999999999999999999999
Q ss_pred EEEEeC
Q psy10953 152 VHMYSY 157 (181)
Q Consensus 152 v~i~~~ 157 (181)
|++|+.
T Consensus 218 v~iW~~ 223 (345)
T 3fm0_A 218 VRIWRQ 223 (345)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999986
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=2.7e-27 Score=183.93 Aligned_cols=148 Identities=28% Similarity=0.489 Sum_probs=132.6
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------- 85 (181)
.+.+++|+|+|++|++|+.|++|++||+.+++....+..|...+.+++|+|++++|++++.|+.+++||++++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 4889999999999999999999999999999998888888888899999999999999999999999999865
Q ss_pred CcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeee--------ecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 86 HSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTF--------KHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 86 ~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+...+..++|+| +++++++++.|+.|++||++++..+..+ .|...|++++|+|+|++|++++.|+.|++|+
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 345688999999 8999999999999999999988766554 3677899999999999999999999999999
Q ss_pred CCCC
Q psy10953 157 YKPE 160 (181)
Q Consensus 157 ~~~~ 160 (181)
+...
T Consensus 285 ~~~~ 288 (393)
T 1erj_A 285 LQNA 288 (393)
T ss_dssp C---
T ss_pred CCCC
Confidence 8753
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=5.9e-27 Score=182.00 Aligned_cols=164 Identities=26% Similarity=0.485 Sum_probs=138.9
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEEeC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINIFDA 82 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d~ 82 (181)
+..+..+...+.+++|+|++++|++++.|++|++||+++++....+..+.. +.+++++| ++++|++++.|+.|++||+
T Consensus 158 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 158 VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDS 236 (393)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC-EEEEEECSTTCCEEEEEETTSCEEEEET
T ss_pred EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCC-cEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 455667788899999999999999999999999999999988777765444 56899999 8999999999999999998
Q ss_pred CC---------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc------------eeeee-ecCCcEEEE
Q psy10953 83 NT---------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRE------------NMHTF-KHADQVWCV 134 (181)
Q Consensus 83 ~~---------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~------------~~~~~-~~~~~v~~~ 134 (181)
.+ +|...|.+++|+|+|++|++++.|+.|++||++... ....+ .|...|.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 316 (393)
T 1erj_A 237 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 316 (393)
T ss_dssp TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEE
T ss_pred CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEE
Confidence 63 466789999999999999999999999999987532 22233 377889999
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 135 CVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+++|++++|++++.|+.|++|+..++..+....+
T Consensus 317 ~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~ 350 (393)
T 1erj_A 317 ATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG 350 (393)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 9999999999999999999999998887765544
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=3e-27 Score=195.42 Aligned_cols=162 Identities=30% Similarity=0.447 Sum_probs=146.2
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.+++|+|+|++|++|+.|++|++||+.+++....+..|...+.+++|+|++++|++++.|+.|++||...
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence 45667778899999999999999999999999999999999888888888889999999999999999999999999742
Q ss_pred -----------CCcccEEEEEEcCCC--CEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 85 -----------GHSSWVLSTAFTRDG--KFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 85 -----------~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
+|...|.+++|+|++ ..+++++.|+.|++||+++.+....+. |...|++++|+|+|++|++++.|+
T Consensus 504 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 504 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 477789999999987 589999999999999999988777775 888999999999999999999999
Q ss_pred cEEEEeCCCCeeEEEc
Q psy10953 151 AVHMYSYKPEEEVEVN 166 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~ 166 (181)
.|++|++.+++.+...
T Consensus 584 ~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 584 VVLLWDLAEGKKLYSL 599 (694)
T ss_dssp BCEEEETTTTEEEECC
T ss_pred eEEEEECCCCceEEEe
Confidence 9999999888766543
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=2.7e-27 Score=190.93 Aligned_cols=151 Identities=34% Similarity=0.601 Sum_probs=134.3
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.+++|+||+++|++++.|++|++||. +++....+..+...+.+++|+|++++|++++.|+.|++||..
T Consensus 419 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~ 497 (577)
T 2ymu_A 419 LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 497 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred EEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC
Confidence 4556667778999999999999999999999999996 466667777777778899999999999999999999999975
Q ss_pred C-------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 84 T-------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 84 ~-------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
. +|...|.+++|+|+|++|++++.|+.|++||. +++.+..+. |...|++++|+|||++|++++.|+.|++|
T Consensus 498 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 3 47788999999999999999999999999996 556666665 88999999999999999999999999999
Q ss_pred e
Q psy10953 156 S 156 (181)
Q Consensus 156 ~ 156 (181)
|
T Consensus 577 d 577 (577)
T 2ymu_A 577 N 577 (577)
T ss_dssp C
T ss_pred C
Confidence 7
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=2.1e-27 Score=183.77 Aligned_cols=153 Identities=20% Similarity=0.410 Sum_probs=133.2
Q ss_pred cCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCC-CCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC
Q psy10953 9 VGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVE-TGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH 86 (181)
Q Consensus 9 ~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~ 86 (181)
.+...+.+++|+| +++++++|+.|++|++||++ .++....+..|...+.+++|+|++++|++++.|+.+++||+++++
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 4556788999976 89999999999999999998 556667777777778899999999999999999999999997542
Q ss_pred ---------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-----ecCCcEEEEEEccCCCEEEEE
Q psy10953 87 ---------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-----KHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 87 ---------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-----~~~~~v~~~~~sp~g~~l~~~ 146 (181)
...+.+++|+|+|+++++++.|+.|++||+..++.+..+ .|.+.|++++|+|+|++|++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 124788999999999999999999999999888766554 377889999999999999999
Q ss_pred cCCCcEEEEeCCCCe
Q psy10953 147 GEDKAVHMYSYKPEE 161 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~ 161 (181)
+.|+.|++|++....
T Consensus 363 s~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 363 SWDKNLKIWAFSGHR 377 (380)
T ss_dssp CTTSCEEEEECCSSS
T ss_pred eCCCCEEEEecCCCc
Confidence 999999999997543
No 32
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.1e-26 Score=174.35 Aligned_cols=165 Identities=21% Similarity=0.281 Sum_probs=139.2
Q ss_pred eeeeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCC-----cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcE
Q psy10953 4 ISKINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETG-----KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v 77 (181)
...+..+...+.+++|+|++ ++|++|+.|++|++|++.+. .....+..|...+.+++|+|++++|++++.|+.|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 44677788889999999965 89999999999999998642 2345667788888899999999999999999999
Q ss_pred EEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccC------CCEE
Q psy10953 78 NIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPD------GDKF 143 (181)
Q Consensus 78 ~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~------g~~l 143 (181)
++||+.+ +|...|.+++|+|+++++++++.|+.|++||++.........|...+.+++++|. +..+
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEE
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEE
Confidence 9999975 4778899999999999999999999999999976543333458888999999985 4489
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 144 VSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
++++.|+.|++|++...+......+
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~ 194 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIG 194 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEeCCCEEEEEECCcchhheeecC
Confidence 9999999999999988766554433
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.2e-26 Score=173.95 Aligned_cols=158 Identities=20% Similarity=0.345 Sum_probs=133.3
Q ss_pred ceeeeccCeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCC--CCEEEEeeCCCc
Q psy10953 3 QISKINVGPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTD--GHWIASGALDGI 76 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~ 76 (181)
.+..+..+...+++++|+| +|++|++|+.|++|++||+++++ ....+..|...+.+++|+|+ +.+|++++.|+.
T Consensus 45 ~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 3556677888899999986 48999999999999999998875 33455556777889999998 899999999999
Q ss_pred EEEEeCCC----------CCcccEEEEEEcCC-------------CCEEEEEeCCCcEEEEecCCCc----eeeeee-cC
Q psy10953 77 INIFDANT----------GHSSWVLSTAFTRD-------------GKFFISASADHTVRVWNFARRE----NMHTFK-HA 128 (181)
Q Consensus 77 v~i~d~~~----------~~~~~v~~~~~s~~-------------~~~l~~~~~d~~i~v~d~~~~~----~~~~~~-~~ 128 (181)
|++||++. +|...|.+++|+|+ +++|++++.|+.|++||++++. ....+. |.
T Consensus 125 v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~ 204 (297)
T 2pm7_B 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (297)
T ss_dssp EEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC
Confidence 99999864 35567899999997 5799999999999999998754 334444 78
Q ss_pred CcEEEEEEccCC---CEEEEEcCCCcEEEEeCCCC
Q psy10953 129 DQVWCVCVAPDG---DKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 129 ~~v~~~~~sp~g---~~l~~~~~d~~v~i~~~~~~ 160 (181)
..|++++|+|++ ++|++++.|+.|++|++..+
T Consensus 205 ~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 205 DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 899999999995 88999999999999998764
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=5.2e-28 Score=185.80 Aligned_cols=160 Identities=14% Similarity=0.163 Sum_probs=130.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK---LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINI 79 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i 79 (181)
.+..+..+...+.+++|+|++++|++++.|++|++||+.+++ ....+..+...+.+++|+|++++|++++.|+.+++
T Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 126 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV 126 (377)
T ss_dssp ECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEE
T ss_pred EEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEE
Confidence 345566677789999999999999999999999999999877 44455556777889999999999999999999999
Q ss_pred EeCCCC------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC------------------CceeeeeecCC
Q psy10953 80 FDANTG------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFAR------------------RENMHTFKHAD 129 (181)
Q Consensus 80 ~d~~~~------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~------------------~~~~~~~~~~~ 129 (181)
||++.+ |...|.+++|+|++++|++++.|+.|++||+.. ++.+..+.|..
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGG 206 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSS
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCc
Confidence 998642 677899999999999999999999999999852 33444446778
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 130 QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
.|.+++|+|++++|++++.|+.|++|++..++.
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 899999999999999999999999999987754
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3e-26 Score=184.80 Aligned_cols=162 Identities=30% Similarity=0.484 Sum_probs=140.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.+++|+|||++|++++.|++|++||. +++....+..+...+.+++|+||+++|++++.|+.+++||..
T Consensus 378 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~ 456 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN 456 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 4556667778999999999999999999999999995 567777777787888899999999999999999999999975
Q ss_pred C-------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 84 T-------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 84 ~-------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
. +|...|.+++|+|++++|++++.|+.|++||. +++.+..+. |...|++++|+|+|++|++++.|+.|++|
T Consensus 457 ~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 457 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 3 47788999999999999999999999999995 555666665 88899999999999999999999999999
Q ss_pred eCCCCeeEEEcCC
Q psy10953 156 SYKPEEEVEVNGG 168 (181)
Q Consensus 156 ~~~~~~~~~~~~~ 168 (181)
+. +++.+....+
T Consensus 536 d~-~~~~~~~~~~ 547 (577)
T 2ymu_A 536 NR-NGQLLQTLTG 547 (577)
T ss_dssp CT-TSCEEEEEEC
T ss_pred eC-CCCEEEEEcC
Confidence 97 4555544433
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=5.6e-26 Score=173.35 Aligned_cols=156 Identities=23% Similarity=0.362 Sum_probs=133.2
Q ss_pred ceeeeccCeeeEEEEEE-----cC-CCCEEEEEeCCCcEEEEeCCCC-------cEEEEEecCCceEEEEEECCCCCEEE
Q psy10953 3 QISKINVGPVDMWNVVF-----SP-DDKYVLSGSQSGKINLYGVETG-------KLEQIFDTRGKFTLSIAYSTDGHWIA 69 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-----s~-~g~~l~~~~~d~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~s~d~~~l~ 69 (181)
.+..+..+...|++++| ++ ++++|++|+.|++|++||+.+. .....+..|...+.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 34567778888999999 76 9999999999999999998753 33455667777888999999999999
Q ss_pred EeeCCCcEEEEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee---ecCCcEEEEEEcc
Q psy10953 70 SGALDGIINIFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF---KHADQVWCVCVAP 138 (181)
Q Consensus 70 ~~~~d~~v~i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~v~~~~~sp 138 (181)
+++.|+.|++||+++ +|...|.+++|+|++++|++++.|+.|++||+......... .|...+.+++|+|
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 999999999999975 47788999999999999999999999999999754333322 3667899999999
Q ss_pred CC----------CEEEEEcCCCcEEEEeCC
Q psy10953 139 DG----------DKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 139 ~g----------~~l~~~~~d~~v~i~~~~ 158 (181)
++ .++++++.|+.|++|+..
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 87 789999999999999954
No 37
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=8.2e-26 Score=171.88 Aligned_cols=167 Identities=17% Similarity=0.318 Sum_probs=140.1
Q ss_pred cceeeeccCeeeEEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-CcEE-EEEecCCceEEEEEECCCCCEEEEeeCCCc
Q psy10953 2 KQISKINVGPVDMWNVVFSPD---DKYVLSGSQSGKINLYGVET-GKLE-QIFDTRGKFTLSIAYSTDGHWIASGALDGI 76 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~---g~~l~~~~~d~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~ 76 (181)
+.+..+..+...+.+++|+|+ |++|++|+.|+.|++||+.+ ++.. ..+..+...+.+++|+|++++|++++.|+.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 456667778888999999999 69999999999999999987 5554 566677778889999999999999999999
Q ss_pred EEEEeCCCC-------CcccEEEEEE--cCCCCEEEEEeCCCcEEEEecCCCceeeee----------------------
Q psy10953 77 INIFDANTG-------HSSWVLSTAF--TRDGKFFISASADHTVRVWNFARRENMHTF---------------------- 125 (181)
Q Consensus 77 v~i~d~~~~-------~~~~v~~~~~--s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~---------------------- 125 (181)
|++||+.++ |...|.+++| +|+++++++++.|+.|++||+++++.+..+
T Consensus 110 v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE 189 (368)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG
T ss_pred EEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC
Confidence 999999754 6778999999 999999999999999999998754321111
Q ss_pred --------------------------------------------------------------------e-cCC-------
Q psy10953 126 --------------------------------------------------------------------K-HAD------- 129 (181)
Q Consensus 126 --------------------------------------------------------------------~-~~~------- 129 (181)
. |..
T Consensus 190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (368)
T 3mmy_A 190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269 (368)
T ss_dssp GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CC
T ss_pred CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccc
Confidence 0 111
Q ss_pred -----cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 130 -----QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 130 -----~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
.|.+++|+|++++|++++.|+.|++|++.+++.+....+
T Consensus 270 ~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp CEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC
Confidence 488999999999999999999999999998887766554
No 38
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.5e-27 Score=179.85 Aligned_cols=151 Identities=16% Similarity=0.210 Sum_probs=116.4
Q ss_pred eeccCeeeEEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC---ceEEEEEECCCCCEE-----------
Q psy10953 6 KINVGPVDMWNVVFSP---DDKYVLSGSQSGKINLYGVETGKLEQIFDTRG---KFTLSIAYSTDGHWI----------- 68 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~---~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~s~d~~~l----------- 68 (181)
.+..++..+..++|+| ++.+|++++.|++|++||+++++.+..+..+. ..+.+++|+|+|+++
T Consensus 173 s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 173 NQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp EEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred eeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 3445555666778888 77889999999999999999999988886433 234567899999876
Q ss_pred -EEeeCCCcEEEEeCCCCCcccEEEEEEcCCC------------CEEEEEeCCCcEEEEecCCCceeeeee-cCCcEE-E
Q psy10953 69 -ASGALDGIINIFDANTGHSSWVLSTAFTRDG------------KFFISASADHTVRVWNFARRENMHTFK-HADQVW-C 133 (181)
Q Consensus 69 -~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~------------~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~-~ 133 (181)
++|+.|+++++||..++..-.+..+++ |+| .++++++.|++|++||+.+++.+.++. |.+.+. .
T Consensus 253 laSGs~D~tIklWd~~tgk~l~v~~~~~-p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLSVGVMLYCL-PPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSF 331 (356)
T ss_dssp -----CCEEEEEEETTTTEEEEEEEECC-CTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCE
T ss_pred eeccCCCcEEEEEECCCCEEEEEEEeec-cCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEE
Confidence 557889999999987664333333333 433 468999999999999999999999886 655555 5
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
++|||||++|++|+.|++|++|++
T Consensus 332 vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEecC
Confidence 899999999999999999999985
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=3.2e-26 Score=172.35 Aligned_cols=161 Identities=17% Similarity=0.316 Sum_probs=135.9
Q ss_pred eeeeccCeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC---------cEEEEEecCCceEEEEEECCC--CCEEEE
Q psy10953 4 ISKINVGPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETG---------KLEQIFDTRGKFTLSIAYSTD--GHWIAS 70 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~---------~~~~~~~~~~~~~~~~~~s~d--~~~l~~ 70 (181)
+..+..+...+.+++|+| |+++|++++.|++|++||++++ +....+..+...+.+++|+|+ +++|++
T Consensus 50 ~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 129 (351)
T 3f3f_A 50 SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC 129 (351)
T ss_dssp EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE
Confidence 344566778899999999 6999999999999999999877 445566667777889999999 999999
Q ss_pred eeCCCcEEEEeCCC------------------------------------------------------------------
Q psy10953 71 GALDGIINIFDANT------------------------------------------------------------------ 84 (181)
Q Consensus 71 ~~~d~~v~i~d~~~------------------------------------------------------------------ 84 (181)
++.|+.+++||+++
T Consensus 130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (351)
T 3f3f_A 130 LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK 209 (351)
T ss_dssp EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE
T ss_pred ecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee
Confidence 99999999999642
Q ss_pred --CCcccEEEEEEcCCC----CEEEEEeCCCcEEEEecCCC---------------------------------------
Q psy10953 85 --GHSSWVLSTAFTRDG----KFFISASADHTVRVWNFARR--------------------------------------- 119 (181)
Q Consensus 85 --~~~~~v~~~~~s~~~----~~l~~~~~d~~i~v~d~~~~--------------------------------------- 119 (181)
+|...|.+++|+|++ ++|++++.|+.|++||++.+
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 244568899999998 89999999999999998764
Q ss_pred -------ceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 120 -------ENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 120 -------~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
..+..+. |...|++++|+|++++|++++.|+.|++|++..++.+.
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 3333343 77889999999999999999999999999998876544
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1.7e-25 Score=168.43 Aligned_cols=161 Identities=20% Similarity=0.324 Sum_probs=143.8
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.+++|+|+++++++++.|+.|++||+++++....+..+...+.+++|+|++++|++++.|+.+++||+++
T Consensus 135 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred eecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 34555666789999999999999999999999999999998888877777788999999999999999999999999976
Q ss_pred C-------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 85 G-------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 85 ~-------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+ +...+.+++|+|+++++++++.++.|++||+...+......|...+.+++|+|+++++++++.|+.|++|++
T Consensus 215 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 215 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp TEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 4 456789999999999999999999999999998876655568889999999999999999999999999999
Q ss_pred CCCeeEEE
Q psy10953 158 KPEEEVEV 165 (181)
Q Consensus 158 ~~~~~~~~ 165 (181)
.+++.+..
T Consensus 295 ~~~~~~~~ 302 (337)
T 1gxr_A 295 PYGASIFQ 302 (337)
T ss_dssp TTCCEEEE
T ss_pred CCCeEEEE
Confidence 98876643
No 41
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=2.2e-25 Score=168.34 Aligned_cols=163 Identities=23% Similarity=0.409 Sum_probs=135.2
Q ss_pred eeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCc-----EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEE
Q psy10953 6 KINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGK-----LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINI 79 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i 79 (181)
.+..+...|.+++|+|+ +++|++|+.|++|++||+.+.+ ....+..|...+.+++|+|++++|++++.|+.+++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 46778889999999997 6899999999999999987654 23455667778889999999999999999999998
Q ss_pred EeCCC---------------------------------------------------CCcccEEEEEEcCCC--CEEEEEe
Q psy10953 80 FDANT---------------------------------------------------GHSSWVLSTAFTRDG--KFFISAS 106 (181)
Q Consensus 80 ~d~~~---------------------------------------------------~~~~~v~~~~~s~~~--~~l~~~~ 106 (181)
|+... +|...+..++|++++ .++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 88642 133456677888765 4778888
Q ss_pred CCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 107 ADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 107 ~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
.|+.|++||+++++....+. |...|++++|+|++++|++++.|+.|++|++.....+....+
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 99999999998888777765 788999999999999999999999999999998877655443
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=4.6e-25 Score=166.08 Aligned_cols=159 Identities=16% Similarity=0.301 Sum_probs=141.1
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
.+...+.+++|+|+++++++++.|++|++||+.+++ ....+..+...+.+++|+|+++++++++.|+.+++||+++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 456678999999999999999999999999999887 4455566677788999999999999999999999999874
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
.|...+.+++|+|+++++++++.|+.|++||+++++.+..+.+...+.+++|+|+++++++++.++.|++|++.
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 36778999999999999999999999999999999888888888899999999999999999999999999998
Q ss_pred CCeeEEEcC
Q psy10953 159 PEEEVEVNG 167 (181)
Q Consensus 159 ~~~~~~~~~ 167 (181)
.++......
T Consensus 255 ~~~~~~~~~ 263 (337)
T 1gxr_A 255 KPDKYQLHL 263 (337)
T ss_dssp SSCEEEECC
T ss_pred CCCeEEEcC
Confidence 876655433
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=1.4e-25 Score=174.36 Aligned_cols=157 Identities=18% Similarity=0.249 Sum_probs=136.9
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
..+..+...+.+++|+|++++|++++.|++|++||+++++....+..|...+.+++|+|++++|++++.|+.+++||+++
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 34456778899999999999999999999999999999998888888888888999999999999999999999999875
Q ss_pred C-----------CcccEEE---------------------EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCc
Q psy10953 85 G-----------HSSWVLS---------------------TAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQ 130 (181)
Q Consensus 85 ~-----------~~~~v~~---------------------~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~ 130 (181)
+ +...+.. ++|+|+++++++++.|+.|++||+++++.+..+. |...
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 3 2223333 4568999999999999999999999988776664 6678
Q ss_pred EEEEEEccCCC-EEEEEcCCCcEEEEeCCCCe
Q psy10953 131 VWCVCVAPDGD-KFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 131 v~~~~~sp~g~-~l~~~~~d~~v~i~~~~~~~ 161 (181)
+++++|+|+++ ++++++.|+.|++|++..+.
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 99999999999 99999999999999998763
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=3.6e-27 Score=181.14 Aligned_cols=158 Identities=11% Similarity=0.209 Sum_probs=129.8
Q ss_pred CcceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 1 MKQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG--KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
|......+.....+.+++|+|+|++|++++.|++|++||+.++ +....+..|...+.+++|+|++++|++++.|+.++
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred CCcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3333344445556899999999999999999999999999988 56666777777888999999999999999999999
Q ss_pred EEeCCC-----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce---eeeee--cCCcEEEEEEccCCCE
Q psy10953 79 IFDANT-----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN---MHTFK--HADQVWCVCVAPDGDK 142 (181)
Q Consensus 79 i~d~~~-----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~--~~~~v~~~~~sp~g~~ 142 (181)
+||+.+ +|...|.+++|+|++++|++++.|+.|++||+..++. ...+. |...|++++|+|++++
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 999864 3566799999999999999999999999999988763 44443 7889999999999999
Q ss_pred EEEEcCCCcEEEEeCC
Q psy10953 143 FVSVGEDKAVHMYSYK 158 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~ 158 (181)
|++++.|+.|++|++.
T Consensus 161 l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAY 176 (377)
T ss_dssp EEEEESSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEEEE
Confidence 9999999999999985
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=1.8e-25 Score=170.69 Aligned_cols=166 Identities=15% Similarity=0.201 Sum_probs=141.9
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE--ecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF--DTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
.+..+..+...+.+++|+|++++|++++.|++|++||+++++....+ ..+...+.+++|+|++++|++++.|+.+++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 45666677888999999999999999999999999999988765544 3356668899999999999999999999999
Q ss_pred eCCC------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecC------------------CCceeeeee-cCC
Q psy10953 81 DANT------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFA------------------RRENMHTFK-HAD 129 (181)
Q Consensus 81 d~~~------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~------------------~~~~~~~~~-~~~ 129 (181)
|+.. +|...|.+++|+|+++++++++.|+.|++||+. .+..+..+. |..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9753 356779999999999999999999999999954 455666664 778
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 130 QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
.+.+++|+|++++|++++.|+.|++|++.+++.+....+
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 899999999999999999999999999988776654443
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.7e-26 Score=180.33 Aligned_cols=158 Identities=18% Similarity=0.306 Sum_probs=132.1
Q ss_pred eeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 6 KINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+...|.+++|+| ++++|++|+.|++|++||++++........+. ..+.+++|+|++++|++|+.|+.|++||+
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 3445677899999998 78999999999999999998766544443332 33557899999999999999999999998
Q ss_pred CC-------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeee----eecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 83 NT-------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHT----FKHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 83 ~~-------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~----~~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
+. +|...|.+++|+|+++ ++++++.|+.|++||++..+.... ..|...|++++|+|+|++|++++.|+
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 239 DGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp SSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS
T ss_pred CcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC
Confidence 63 4778899999999986 788999999999999987653332 34788999999999999999999999
Q ss_pred cEEEEeCCCCeeE
Q psy10953 151 AVHMYSYKPEEEV 163 (181)
Q Consensus 151 ~v~i~~~~~~~~~ 163 (181)
.|++|++..+...
T Consensus 319 ~i~iwd~~~~~~~ 331 (435)
T 4e54_B 319 EIRVYSASQWDCP 331 (435)
T ss_dssp CEEEEESSSSSSE
T ss_pred EEEEEECCCCccc
Confidence 9999999877544
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=2.8e-25 Score=171.20 Aligned_cols=155 Identities=12% Similarity=0.208 Sum_probs=136.2
Q ss_pred eeeeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcEEEEEe--cCCceEEEEEECC-CCCEEEEeeCCCcEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETGKLEQIFD--TRGKFTLSIAYST-DGHWIASGALDGIINI 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i 79 (181)
+..+..+...+.+++|+|++ ++|++|+.|++|++||+.+++....+. .+...+.+++|+| ++++|++++.|+.+++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 44566777889999999999 999999999999999999888877765 3667788999999 7799999999999999
Q ss_pred EeCCCC----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCC-EEEEEc
Q psy10953 80 FDANTG----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGD-KFVSVG 147 (181)
Q Consensus 80 ~d~~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~-~l~~~~ 147 (181)
||+... +...|.+++|+|+++++++++.|+.|++||++ ++.+..+. |...|.+++|+|+++ ++++++
T Consensus 146 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 146 RDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp EETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEE
T ss_pred EECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEe
Confidence 998742 34679999999999999999999999999994 55555554 888999999999999 899999
Q ss_pred CCCcEEEEeCCC
Q psy10953 148 EDKAVHMYSYKP 159 (181)
Q Consensus 148 ~d~~v~i~~~~~ 159 (181)
.|+.|++|++..
T Consensus 225 ~d~~i~iwd~~~ 236 (383)
T 3ei3_B 225 VDATVKLWDLRN 236 (383)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCEEEEEeCCC
Confidence 999999999986
No 48
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=6.1e-26 Score=174.45 Aligned_cols=155 Identities=20% Similarity=0.375 Sum_probs=125.7
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCcEE----EEEecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQ------SGKINLYGVETGKLE----QIFDTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~------d~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
.++..+.+++|||||++|++|+. |+++++|+..++... .....+...+.+++|+|+++ +++++.|+.|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEE
Confidence 35667899999999999999997 678999998766532 12223445578999999986 55678899999
Q ss_pred EEeCCC------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCC-EEE
Q psy10953 79 IFDANT------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGD-KFV 144 (181)
Q Consensus 79 i~d~~~------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~-~l~ 144 (181)
+||+.+ +|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. |...|++++|+|+++ .++
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~ 198 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFL 198 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEE
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceee
Confidence 999853 466789999999999999999999999999999998888876 788999999999985 788
Q ss_pred EEcCCCcEEEEeCCCCeeEE
Q psy10953 145 SVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~ 164 (181)
+++.|+.|++||+.+++.+.
T Consensus 199 s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 199 SCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp EEETTSCEEECCTTSSSCBC
T ss_pred eeccCCceEEEECCCCceee
Confidence 99999999999998776543
No 49
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=3.2e-25 Score=166.86 Aligned_cols=154 Identities=14% Similarity=0.244 Sum_probs=130.8
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----cEEEEEecCCceEEEEEECC--CCCEEEEeeCCCcEEEE
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETG----KLEQIFDTRGKFTLSIAYST--DGHWIASGALDGIINIF 80 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i~ 80 (181)
+..+...+.+++|+|++++|++++.|++|++||+.++ +....+..+...+.+++|+| ++++|++++.|+.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 3457778999999999999999999999999999876 35556667777888999999 69999999999999999
Q ss_pred eCCC-----------------CCcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCce--------------------
Q psy10953 81 DANT-----------------GHSSWVLSTAFTRD--GKFFISASADHTVRVWNFARREN-------------------- 121 (181)
Q Consensus 81 d~~~-----------------~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~-------------------- 121 (181)
|+.. +|...|.+++|+|+ ++++++++.|+.|++||+++++.
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 9864 35567999999999 99999999999999999865331
Q ss_pred ----------------------------------------eeee-ecCCcEEEEEEccCC----CEEEEEcCCCcEEEEe
Q psy10953 122 ----------------------------------------MHTF-KHADQVWCVCVAPDG----DKFVSVGEDKAVHMYS 156 (181)
Q Consensus 122 ----------------------------------------~~~~-~~~~~v~~~~~sp~g----~~l~~~~~d~~v~i~~ 156 (181)
+..+ .|...|.+++|+|++ ++|++++.|+.|++|+
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 1122 266789999999998 8999999999999999
Q ss_pred CCCC
Q psy10953 157 YKPE 160 (181)
Q Consensus 157 ~~~~ 160 (181)
+..+
T Consensus 247 ~~~~ 250 (351)
T 3f3f_A 247 ITEK 250 (351)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 9764
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=2e-26 Score=174.22 Aligned_cols=153 Identities=17% Similarity=0.235 Sum_probs=127.4
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECC--CCCEEEEeeCCCcEEEEeCC
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYST--DGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i~d~~ 83 (181)
..+...+.+++|+|+|++|++|+.|++|++||+++++ ....+..|...+.+++|++ ++++|++++.|+.|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 3577789999999999999999999999999998775 3456677888888999986 48999999999999999986
Q ss_pred CC----------CcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCcee---eee-ecCCcEEEEEEccC--------
Q psy10953 84 TG----------HSSWVLSTAFTRD--GKFFISASADHTVRVWNFARRENM---HTF-KHADQVWCVCVAPD-------- 139 (181)
Q Consensus 84 ~~----------~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~~---~~~-~~~~~v~~~~~sp~-------- 139 (181)
++ |...|.+++|+|+ +++|++++.|+.|++||++..... ..+ .|...+.+++|+|+
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 53 6677899999998 789999999999999999875322 222 36678899999998
Q ss_pred ---------CCEEEEEcCCCcEEEEeCCCC
Q psy10953 140 ---------GDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 140 ---------g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+++|++++.|+.|++|++..+
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCC
Confidence 478999999999999999754
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.6e-25 Score=171.09 Aligned_cols=158 Identities=25% Similarity=0.355 Sum_probs=136.4
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCcEEEEEecCCceEEEEEECCC--CCEEEEeeCCCcEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE--TGKLEQIFDTRGKFTLSIAYSTD--GHWIASGALDGIIN 78 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~v~ 78 (181)
.+..+..+...+.+++|+|++++|++|+.|++|++||+. +++....+..|...+.+++|+++ +++|++++.|+.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 455677788889999999999999999999999999998 55666677777778889999987 99999999999999
Q ss_pred EEeCCCC----------CcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCceee--ee-ecCCcEEEEEEcc-----
Q psy10953 79 IFDANTG----------HSSWVLSTAFTRD--GKFFISASADHTVRVWNFARRENMH--TF-KHADQVWCVCVAP----- 138 (181)
Q Consensus 79 i~d~~~~----------~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~~~--~~-~~~~~v~~~~~sp----- 138 (181)
+||+..+ |...|.+++|+|+ ++++++++.|+.|++||+....... .+ .|...|.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 9998653 6678999999999 9999999999999999998764322 22 4778899999999
Q ss_pred --------CCCEEEEEcCCCcEEEEeCCCC
Q psy10953 139 --------DGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 139 --------~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+++++++++.|+.|++|++..+
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 192 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSD 192 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETT
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCC
Confidence 6999999999999999998765
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=1.1e-25 Score=188.00 Aligned_cols=162 Identities=24% Similarity=0.386 Sum_probs=144.3
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+....+..+...+.+++|+|+|++|++++.|++|++||+.+++....+..+...+.+++|+|++++|++++.|+.+++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 35567777888899999999999999999999999999999999988888888888999999999999999999999999
Q ss_pred CCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-ceeeeee-cCCcEEEEEEcc-CCCEEEEEcCCC
Q psy10953 82 ANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-ENMHTFK-HADQVWCVCVAP-DGDKFVSVGEDK 150 (181)
Q Consensus 82 ~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~-~~~~v~~~~~sp-~g~~l~~~~~d~ 150 (181)
+.+ +|...|.+++|+|+++++++++.|+.|++||+.++ .....+. |...+.+++|+| +++.+++++.|+
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 875 36778999999999999999999999999999876 4444444 778899999999 889999999999
Q ss_pred cEEEEeCCCCeeE
Q psy10953 151 AVHMYSYKPEEEV 163 (181)
Q Consensus 151 ~v~i~~~~~~~~~ 163 (181)
.|++|++..+...
T Consensus 164 ~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 164 TVKVWSLGQSTPN 176 (814)
T ss_dssp EEEEEETTCSSCS
T ss_pred eEEEEECCCCcce
Confidence 9999999766443
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.7e-25 Score=166.57 Aligned_cols=163 Identities=16% Similarity=0.315 Sum_probs=142.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC-----CcE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD-----GII 77 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d-----~~v 77 (181)
.+..+..+...+.+++|+|++++|++++.|++|++||+.+++....+. +...+.+++|+|+++++++++.+ +.+
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 455667778889999999999999999999999999999999988887 55567799999999999999998 999
Q ss_pred EEEeCCCC-------------------Ccc--cEEEEEEcCCCCEEEEEeCCCcEEEEecCC-Cceeeeee-cCCcEEEE
Q psy10953 78 NIFDANTG-------------------HSS--WVLSTAFTRDGKFFISASADHTVRVWNFAR-RENMHTFK-HADQVWCV 134 (181)
Q Consensus 78 ~i~d~~~~-------------------~~~--~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~v~~~ 134 (181)
.+||+... +.. .+.+++|+|+++++++++.|+.|++||+++ ...+..+. |...|.++
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 99997532 112 789999999999999999999999999998 56666665 77889999
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 135 CVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
+|+|++++|++++.|+.|++|++.++..+...
T Consensus 225 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 99999999999999999999999887665543
No 54
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.3e-25 Score=167.44 Aligned_cols=164 Identities=15% Similarity=0.238 Sum_probs=140.9
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
...+..+...+.+++|+|+|++|++++.|+.|++||+.+++....+..+...+.+++|+|++++|++++.|+.|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 45577788889999999999999999999999999999999998888888888899999999999999999999999997
Q ss_pred CC-------CcccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCce-----------eeee-ecCC--cEEEEEEc
Q psy10953 84 TG-------HSSWVLSTAFTRDGKFFISASAD-----HTVRVWNFARREN-----------MHTF-KHAD--QVWCVCVA 137 (181)
Q Consensus 84 ~~-------~~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~~-----------~~~~-~~~~--~v~~~~~s 137 (181)
++ +...+.+++|+|+++++++++.+ +.|++||+..... ...+ .+.. .+.+++|+
T Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 105 NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 64 45678999999999999999998 9999999875432 1122 2333 79999999
Q ss_pred cCCCEEEEEcCCCcEEEEeCCC-CeeEEEcC
Q psy10953 138 PDGDKFVSVGEDKAVHMYSYKP-EEEVEVNG 167 (181)
Q Consensus 138 p~g~~l~~~~~d~~v~i~~~~~-~~~~~~~~ 167 (181)
|+++++++++.|+.|++|++.. +..+....
T Consensus 185 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 215 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYDVSNNYEYVDSID 215 (369)
T ss_dssp GGGCEEEEEETTSEEEEEETTTTTEEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCcEeEEEEe
Confidence 9999999999999999999988 55554333
No 55
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=7.1e-26 Score=177.96 Aligned_cols=151 Identities=15% Similarity=0.256 Sum_probs=125.4
Q ss_pred CeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEE--ecCCceEEEEEECC-CCCEEEEeeCCCcEEEEeCCCC
Q psy10953 10 GPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIF--DTRGKFTLSIAYST-DGHWIASGALDGIINIFDANTG 85 (181)
Q Consensus 10 ~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d~~~~ 85 (181)
+...|.+++|+| ++++||+|+.||+|++||+.+++....+ ..|...+.+++|+| ++++|++++.|++|++||++..
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 344589999999 5678999999999999999877654443 34667788999998 6899999999999999998743
Q ss_pred ----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCC-EEEEEcCCCcEE
Q psy10953 86 ----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGD-KFVSVGEDKAVH 153 (181)
Q Consensus 86 ----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~-~l~~~~~d~~v~ 153 (181)
+...+.+++|+|++++|++++.|+.|++||+.... +..+ .|...|.+++|+|+++ ++++++.|+.|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 23356789999999999999999999999987644 3344 4888999999999987 678899999999
Q ss_pred EEeCCCCe
Q psy10953 154 MYSYKPEE 161 (181)
Q Consensus 154 i~~~~~~~ 161 (181)
+||+....
T Consensus 277 iwd~~~~~ 284 (435)
T 4e54_B 277 IWDLRQVR 284 (435)
T ss_dssp EEETTTCC
T ss_pred EEeccccc
Confidence 99987643
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=2.3e-25 Score=173.02 Aligned_cols=158 Identities=17% Similarity=0.296 Sum_probs=138.3
Q ss_pred eeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------cEEEEEecCCceEEEEEECCCC-CEEEEeeCC
Q psy10953 4 ISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETG-------KLEQIFDTRGKFTLSIAYSTDG-HWIASGALD 74 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~s~d~-~~l~~~~~d 74 (181)
+..+..+...+.+++|+| ++++|++|+.|++|++||+.++ +....+..|...+.+++|+|++ .+|++++.|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 445566778899999999 9999999999999999999987 4566777778888899999998 699999999
Q ss_pred CcEEEEeCCC----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-e-cCCc-EEEEEEccCCC
Q psy10953 75 GIINIFDANT----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-K-HADQ-VWCVCVAPDGD 141 (181)
Q Consensus 75 ~~v~i~d~~~----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~-~~~~-v~~~~~sp~g~ 141 (181)
+.|++||+.+ +|...|.+++|+|++++|++++.|+.|++||+++++.+..+ . |.+. +.+++|+|+++
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 9999999863 46778999999999999999999999999999998888776 3 5444 88999999999
Q ss_pred EEEEE---cCCCcEEEEeCCCCe
Q psy10953 142 KFVSV---GEDKAVHMYSYKPEE 161 (181)
Q Consensus 142 ~l~~~---~~d~~v~i~~~~~~~ 161 (181)
+++++ +.|+.|++|++..+.
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCS
T ss_pred EEEEeccCCCCceEEEEcCcccc
Confidence 99999 789999999997754
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=4.5e-25 Score=168.55 Aligned_cols=151 Identities=9% Similarity=0.110 Sum_probs=132.5
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~- 84 (181)
..+...+.+++|+|++++|++++.|+.|++||+.+++ ....+..+...+.+++|+|++++|++++.|+.+++||+.+
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 3466678999999999999999999999999999887 6677777777888999999999999999999999999854
Q ss_pred ---------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce---eeee--ecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 85 ---------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN---MHTF--KHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 85 ---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
.|...|.+++|+|+++++++++.|+.|++||+..... ...+ .|...|.+++|+|+++++++++.|+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 3567799999999999999999999999999987653 2222 3677899999999999999999999
Q ss_pred cEEEEeCC
Q psy10953 151 AVHMYSYK 158 (181)
Q Consensus 151 ~v~i~~~~ 158 (181)
.|++|++.
T Consensus 165 ~i~~~d~~ 172 (372)
T 1k8k_C 165 KCRIFSAY 172 (372)
T ss_dssp CEEEEECC
T ss_pred CEEEEEcc
Confidence 99999953
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=1.5e-25 Score=174.19 Aligned_cols=154 Identities=18% Similarity=0.213 Sum_probs=133.2
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------C
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT--------G 85 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------~ 85 (181)
.....|+|++++|++++.|+.|++||+.+++....+..|...+.+++|+|++++|++++.|+.|++||+.+ +
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC
Confidence 44557899999999999999999999999988887777888889999999999999999999999999874 3
Q ss_pred CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEE---------------------EEccCC
Q psy10953 86 HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCV---------------------CVAPDG 140 (181)
Q Consensus 86 ~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~---------------------~~sp~g 140 (181)
|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...+.++ +|+|++
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 67789999999999999999999999999999988777664 33344444 457899
Q ss_pred CEEEEEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 141 DKFVSVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 141 ~~l~~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
+++++++.|+.|++|++..++.+....
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 999999999999999998887665443
No 59
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.3e-24 Score=162.73 Aligned_cols=155 Identities=20% Similarity=0.400 Sum_probs=126.7
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC----------------------------------
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR---------------------------------- 52 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---------------------------------- 52 (181)
+..+...+.+++|+|+|++|++|+.|++|++||+++++.+..+..|
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~ 142 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHH 142 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCcee
Confidence 3456667999999999999999999999999999988776544322
Q ss_pred -------CceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC---------------------------------------
Q psy10953 53 -------GKFTLSIAYSTDGHWIASGALDGIINIFDANTGH--------------------------------------- 86 (181)
Q Consensus 53 -------~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--------------------------------------- 86 (181)
...+..+.+++++++|++++.|+.+++||+.++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
T 4ggc_A 143 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 222 (318)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE
T ss_pred EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE
Confidence 2234567888999999999999999999975310
Q ss_pred -----------------cccEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEE
Q psy10953 87 -----------------SSWVLSTAFTRDGKFFISAS--ADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 87 -----------------~~~v~~~~~s~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~ 146 (181)
...+..+.|+|+++.+++++ .|+.|++||+.+++.+..+. |.+.|++++|+|+|++|+++
T Consensus 223 i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 223 IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 11245567888888776654 78999999999999888886 88999999999999999999
Q ss_pred cCCCcEEEEeCCCCe
Q psy10953 147 GEDKAVHMYSYKPEE 161 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~ 161 (181)
|.|+.|++|++....
T Consensus 303 s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 303 AADETLRLWRCFELD 317 (318)
T ss_dssp ETTTEEEEECCSCCC
T ss_pred ecCCeEEEEECCCCC
Confidence 999999999986543
No 60
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.4e-25 Score=173.42 Aligned_cols=163 Identities=12% Similarity=0.266 Sum_probs=135.6
Q ss_pred ceeee-ccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---Cc---EEEEEecCCceEEEEEECCCCCEEEEeeCC
Q psy10953 3 QISKI-NVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVET---GK---LEQIFDTRGKFTLSIAYSTDGHWIASGALD 74 (181)
Q Consensus 3 ~~~~~-~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~---~~---~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d 74 (181)
.+..+ ..+...+.+++|+| ++++|++|+.|++|++||+.+ +. ....+ .+...+.+++|+|++++|++++.|
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCC
Confidence 34556 56778899999999 999999999999999999876 43 12233 356678899999999999999999
Q ss_pred CcEEEEeCC---CC--------------------CcccEEEEE--EcCCCCEEEEEeCCCcEEEEecCCCceeeeee---
Q psy10953 75 GIINIFDAN---TG--------------------HSSWVLSTA--FTRDGKFFISASADHTVRVWNFARRENMHTFK--- 126 (181)
Q Consensus 75 ~~v~i~d~~---~~--------------------~~~~v~~~~--~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--- 126 (181)
+.|++||+. .+ +...+.++. ++++++++++++.|+.|++||+++++.+..+.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999984 21 233344444 56789999999999999999999988887775
Q ss_pred cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 127 HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
|...|++++|+|++++|++++.|+.|++|++..++.+...
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEE
Confidence 6788999999999999999999999999999988877654
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=1.2e-24 Score=164.35 Aligned_cols=154 Identities=17% Similarity=0.285 Sum_probs=129.0
Q ss_pred ccCeeeEEEEEEcCCC--CEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy10953 8 NVGPVDMWNVVFSPDD--KYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG 85 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~ 85 (181)
..+...+..++|++++ .++++++.|++|++||+++++....+..+...+.+++|+|++++|++++.|+.+++||+.+.
T Consensus 168 ~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 168 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 3345567889998765 46789999999999999999998888888888889999999999999999999999999764
Q ss_pred -------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee----------ecCCcEEEEEEccCCCEEEEEcC
Q psy10953 86 -------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF----------KHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 86 -------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----------~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+...+..+.|+|++.++ +++.|+.|++||+..+..+..+ .|...|++++|+|+|++|++++.
T Consensus 248 ~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 248 KHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp EEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred ceeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 34568899999988765 4556899999999887655443 25678999999999999999999
Q ss_pred CCcEEEEeCCCCee
Q psy10953 149 DKAVHMYSYKPEEE 162 (181)
Q Consensus 149 d~~v~i~~~~~~~~ 162 (181)
|+.|++|++.+|.+
T Consensus 327 Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 327 DNLVRVWQVTIGTR 340 (340)
T ss_dssp TSCEEEEEEEC---
T ss_pred CCEEEEEeCCCcCC
Confidence 99999999988753
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=2.7e-25 Score=173.91 Aligned_cols=151 Identities=13% Similarity=0.272 Sum_probs=128.8
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-----------EEEEEecCC------------ceEEEEEECCCC--
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK-----------LEQIFDTRG------------KFTLSIAYSTDG-- 65 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-----------~~~~~~~~~------------~~~~~~~~s~d~-- 65 (181)
...+.+++|+|+|++|++|+.|+.|++||+.+++ ....+..|. ..+.+++|+|++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 4568999999999999999999999999998776 456666675 557899999998
Q ss_pred CEEEEeeCCCcEEEEeCC------------------------------------------------CCCcccEEEEEEcC
Q psy10953 66 HWIASGALDGIINIFDAN------------------------------------------------TGHSSWVLSTAFTR 97 (181)
Q Consensus 66 ~~l~~~~~d~~v~i~d~~------------------------------------------------~~~~~~v~~~~~s~ 97 (181)
..|++++.|+.|++||+. .+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 789999999999999974 35778899999999
Q ss_pred CCCEEEEEeCCCcEEEEecCC-Cceeee-------e-ecCCcEEEEEEccCC-CEEEEEcCCCcEEEEeCCCCee
Q psy10953 98 DGKFFISASADHTVRVWNFAR-RENMHT-------F-KHADQVWCVCVAPDG-DKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 98 ~~~~l~~~~~d~~i~v~d~~~-~~~~~~-------~-~~~~~v~~~~~sp~g-~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
++++|+++ .|+.|++||+.. ...+.. + .|...|++++|+|++ ++|++++.|+.|++|++..+..
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99999998 799999999984 333332 2 377789999999998 9999999999999999988765
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=3.5e-25 Score=170.84 Aligned_cols=151 Identities=21% Similarity=0.341 Sum_probs=135.6
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec---C---CceEEEEEECCCCCEEEEeeCC---CcEEE
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT---R---GKFTLSIAYSTDGHWIASGALD---GIINI 79 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~---~~~~~~~~~s~d~~~l~~~~~d---~~v~i 79 (181)
.+...+.+++|+|++ ++++++.|+.|++||+++++....+.. + ...+.+++|+|++++|++++.| +.+++
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i 262 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL 262 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEE
Confidence 356668999999999 999999999999999999998888887 6 7778899999999999999999 99999
Q ss_pred EeCCC--------C-------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-------c----
Q psy10953 80 FDANT--------G-------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-------H---- 127 (181)
Q Consensus 80 ~d~~~--------~-------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~---- 127 (181)
||+.+ + |...|.+++|+|++++|++++.|+.|++||+.+++.+..+. |
T Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 263 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGC
T ss_pred EECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhh
Confidence 99863 3 67789999999999999999999999999999988887776 4
Q ss_pred -----------CCcEEEEEEccCC----------CEEEEEcCCCcEEEEeCCCC
Q psy10953 128 -----------ADQVWCVCVAPDG----------DKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 128 -----------~~~v~~~~~sp~g----------~~l~~~~~d~~v~i~~~~~~ 160 (181)
...|++++|+|++ ++|++++.|+.|++|++.++
T Consensus 343 ~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred hccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 6789999999998 79999999999999999765
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=6.6e-26 Score=171.36 Aligned_cols=156 Identities=19% Similarity=0.311 Sum_probs=130.6
Q ss_pred eeeeccCeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCC--CCEEEEeeCCCcE
Q psy10953 4 ISKINVGPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTD--GHWIASGALDGII 77 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~v 77 (181)
+..+..+...+++++|+| ++++|++|+.|++|++||+++++ ....+..|...+.+++|+|+ +.+|++++.|+.+
T Consensus 50 ~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i 129 (316)
T 3bg1_A 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI 129 (316)
T ss_dssp EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCE
T ss_pred EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCE
Confidence 455667888899999986 48999999999999999999874 44455567777889999998 7899999999999
Q ss_pred EEEeCCC-----------CCcccEEEEEEcCC-----------------CCEEEEEeCCCcEEEEecCCC---ceeeeee
Q psy10953 78 NIFDANT-----------GHSSWVLSTAFTRD-----------------GKFFISASADHTVRVWNFARR---ENMHTFK 126 (181)
Q Consensus 78 ~i~d~~~-----------~~~~~v~~~~~s~~-----------------~~~l~~~~~d~~i~v~d~~~~---~~~~~~~ 126 (181)
++||+.. +|...+.+++|+|+ +++|++++.|+.|++||+... .....+.
T Consensus 130 ~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~ 209 (316)
T 3bg1_A 130 SLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE 209 (316)
T ss_dssp EEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB
T ss_pred EEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc
Confidence 9999753 35567888999997 478999999999999999754 2344444
Q ss_pred -cCCcEEEEEEccCC----CEEEEEcCCCcEEEEeCCC
Q psy10953 127 -HADQVWCVCVAPDG----DKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 127 -~~~~v~~~~~sp~g----~~l~~~~~d~~v~i~~~~~ 159 (181)
|...|++++|+|++ ++|++++.|+.|++|++..
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 78889999999987 8899999999999999865
No 65
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=1.2e-24 Score=179.92 Aligned_cols=164 Identities=25% Similarity=0.389 Sum_probs=138.4
Q ss_pred eeeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCC-----cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 5 SKINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETG-----KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
..+..|...|++++|+|++ ++|++|+.|++|++|++... .....+..|...+.+++|+|++++|++++.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3467788889999999875 78999999999999998754 23456667888888999999999999999999999
Q ss_pred EEeCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee----ecCCcEEEEEEccCC--CEEE
Q psy10953 79 IFDANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF----KHADQVWCVCVAPDG--DKFV 144 (181)
Q Consensus 79 i~d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----~~~~~v~~~~~sp~g--~~l~ 144 (181)
+||+.+ +|...|.+++|+|++++|++++.|++|++||.......... .|...|.+++|+|++ ..++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 999875 47888999999999999999999999999998665433222 366789999999987 5799
Q ss_pred EEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 145 SVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+++.|+.|++|++..+.......+
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~ 559 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAG 559 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC
T ss_pred EEeCCCeEEEEECCCCcEEEEEcC
Confidence 999999999999988776655544
No 66
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=6e-25 Score=169.29 Aligned_cols=153 Identities=16% Similarity=0.286 Sum_probs=133.1
Q ss_pred cCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecC---CceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 9 VGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTR---GKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 9 ~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+...+.+++|+| ++++|++++.|++|++||+++... ..+..+ ...+.+++|+|++++|++++.|+.+++||+..
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 194 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI-QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG 194 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE-EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce-EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC
Confidence 4777899999999 789999999999999999996443 444332 25578999999999999999999999999853
Q ss_pred -------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCC----CceeeeeecCCcEEEEEEcc-CCCEEEEEcCCCc
Q psy10953 85 -------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFAR----RENMHTFKHADQVWCVCVAP-DGDKFVSVGEDKA 151 (181)
Q Consensus 85 -------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~----~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~~ 151 (181)
+|...|.+++|+|+++ ++++++.|+.|++||+++ +..+..+.|...|.+++|+| ++++|++++.|+.
T Consensus 195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence 4678899999999999 999999999999999987 55666677889999999999 9999999999999
Q ss_pred EEEEeCCCCee
Q psy10953 152 VHMYSYKPEEE 162 (181)
Q Consensus 152 v~i~~~~~~~~ 162 (181)
|++|++.++..
T Consensus 275 i~iwd~~~~~~ 285 (383)
T 3ei3_B 275 IRVYSSYDWSK 285 (383)
T ss_dssp EEEEETTBTTS
T ss_pred EEEEECCCCcc
Confidence 99999987643
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.3e-24 Score=188.86 Aligned_cols=158 Identities=22% Similarity=0.375 Sum_probs=143.3
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
+..+...+++++|+|+|+++++|+.|++|++||+.+++....+..|...+.+++|+|++++|++++.|+.|++||+.+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 345677799999999999999999999999999999999988888888889999999999999999999999999975
Q ss_pred ------CCcccEEEEEEcC--CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 85 ------GHSSWVLSTAFTR--DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 85 ------~~~~~v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
+|...|.+++|+| ++.++++++.|+.|++||+.++.....+. |...|++++|+|+++++++++.|+.|++|
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 4677899999999 45689999999999999999998877765 88899999999999999999999999999
Q ss_pred eCCCCeeEE
Q psy10953 156 SYKPEEEVE 164 (181)
Q Consensus 156 ~~~~~~~~~ 164 (181)
++..+....
T Consensus 771 d~~~~~~~~ 779 (1249)
T 3sfz_A 771 DVRSANERK 779 (1249)
T ss_dssp EGGGTEEEE
T ss_pred eCCCCcccc
Confidence 998876554
No 68
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-25 Score=180.74 Aligned_cols=153 Identities=13% Similarity=0.150 Sum_probs=129.5
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-EEEEEecCCceEEEE--EECCCC-CEEEEeeCCCcEEEEe
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK-LEQIFDTRGKFTLSI--AYSTDG-HWIASGALDGIINIFD 81 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~--~~s~d~-~~l~~~~~d~~v~i~d 81 (181)
.+..+...+.+++|+|++ .|++|+.||+|++||+++++ ....+..|...+.++ .|+|++ ++|++++.|++|++||
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 445566778999999864 79999999999999998764 345566777778888 678888 8999999999999999
Q ss_pred CCCC--------Cc--ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 82 ANTG--------HS--SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 82 ~~~~--------~~--~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
++++ |. ..|.+++|+|+++.+++++.|++|++||++++..+..+ .|.+.|++++|||+|++|++|+.|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 340 PKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp GGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTT
T ss_pred CCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCC
Confidence 8642 22 23678999999999999999999999999998776655 4888999999999999999999999
Q ss_pred cEEEEeCCC
Q psy10953 151 AVHMYSYKP 159 (181)
Q Consensus 151 ~v~i~~~~~ 159 (181)
.|++|+...
T Consensus 420 tv~lwd~~~ 428 (524)
T 2j04_B 420 SLIITNAAR 428 (524)
T ss_dssp EEECCBSCS
T ss_pred EEEEEechH
Confidence 999999753
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.9e-25 Score=169.71 Aligned_cols=154 Identities=15% Similarity=0.242 Sum_probs=136.9
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.+++|+|++++|++++.|+.|++||+++++....+..+...+.+++|+|++ .+++++.|+.+++||+.
T Consensus 240 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 240 TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLK 318 (425)
T ss_dssp SEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETT
T ss_pred eeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECC
Confidence 34555667778999999999999999999999999999998888887777778899999999 99999999999999997
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc--------------------eeeeee-cCC--cEE
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRE--------------------NMHTFK-HAD--QVW 132 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~--------------------~~~~~~-~~~--~v~ 132 (181)
++ |...+.+++|+|++++|++++.|+.|++||+.+.. .+..+. |.. .|.
T Consensus 319 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 398 (425)
T 1r5m_A 319 QNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIF 398 (425)
T ss_dssp TTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEE
T ss_pred CCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceE
Confidence 53 56789999999999999999999999999998776 666665 444 899
Q ss_pred EEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 133 CVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 133 ~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+++|+|++++|++++.|+.|++|+++
T Consensus 399 ~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 399 DLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEEccCCCceEEEEecCceEEEEeec
Confidence 99999999999999999999999985
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-24 Score=165.21 Aligned_cols=157 Identities=20% Similarity=0.378 Sum_probs=135.5
Q ss_pred eeeeccCeeeEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCC--CCEEEEeeCCCcE
Q psy10953 4 ISKINVGPVDMWNVVFSPD--DKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTD--GHWIASGALDGII 77 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~--g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~v 77 (181)
+..+..+...+.+++|+|+ +++|++++.|++|++||+.+++ ....+..+...+.+++|+|+ +.+|++++.|+.+
T Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 4456667788999999987 9999999999999999999887 45555566777889999999 9999999999999
Q ss_pred EEEeCCCC----------CcccEEEEEEcC-------------CCCEEEEEeCCCcEEEEecCCCce----eeeee-cCC
Q psy10953 78 NIFDANTG----------HSSWVLSTAFTR-------------DGKFFISASADHTVRVWNFARREN----MHTFK-HAD 129 (181)
Q Consensus 78 ~i~d~~~~----------~~~~v~~~~~s~-------------~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~ 129 (181)
++||+... |...|.+++|+| +++++++++.|+.|++||++.+.. ...+. |..
T Consensus 128 ~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~ 207 (379)
T 3jrp_A 128 SVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 207 (379)
T ss_dssp EEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC
Confidence 99998753 556789999999 699999999999999999986542 23333 778
Q ss_pred cEEEEEEccC---CCEEEEEcCCCcEEEEeCCCC
Q psy10953 130 QVWCVCVAPD---GDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 130 ~v~~~~~sp~---g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.|.+++|+|+ +++|++++.|+.|++|++..+
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 8999999999 899999999999999999875
No 71
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.2e-25 Score=167.13 Aligned_cols=148 Identities=11% Similarity=0.232 Sum_probs=122.6
Q ss_pred eeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 12 VDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 12 ~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
..+.+++|+| +++++++++.|++|++||+++++....... +...+.+++|+|++++|++|+.|+.|++||+++
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 5689999999 999999999999999999999998766533 344567899999999999999999999999863
Q ss_pred -----C-CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcE--EEEEEccCCCEEEEEcC-CCc
Q psy10953 85 -----G-HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK----HADQV--WCVCVAPDGDKFVSVGE-DKA 151 (181)
Q Consensus 85 -----~-~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v--~~~~~sp~g~~l~~~~~-d~~ 151 (181)
. |...|.+++|+|+|++|++++ ++.|++||++..+.+..+. +...+ .+++|+|+|++|++++. |+.
T Consensus 206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~ 284 (343)
T 3lrv_A 206 SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS 284 (343)
T ss_dssp CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE
T ss_pred ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCc
Confidence 2 677899999999999999999 5599999999876654433 22223 36999999999999988 999
Q ss_pred EEEEeCCCC
Q psy10953 152 VHMYSYKPE 160 (181)
Q Consensus 152 v~i~~~~~~ 160 (181)
+++|++...
T Consensus 285 i~v~~~~~~ 293 (343)
T 3lrv_A 285 LTIYKFDKK 293 (343)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEccc
Confidence 999998554
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=4.9e-25 Score=167.66 Aligned_cols=157 Identities=20% Similarity=0.347 Sum_probs=136.8
Q ss_pred ceeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEE---ecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 3 QISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIF---DTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
.+..+..+...+.+++|+| ++++|++++.|++|++||+++++....+ ..+...+.+++|+|++++|++++.|+.++
T Consensus 107 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 186 (366)
T 3k26_A 107 CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLK 186 (366)
T ss_dssp EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEE
Confidence 4556667788899999999 9999999999999999999999988877 45677788999999999999999999999
Q ss_pred EEeCCCC------------------------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce-
Q psy10953 79 IFDANTG------------------------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN- 121 (181)
Q Consensus 79 i~d~~~~------------------------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~- 121 (181)
+||++++ |...|.+++|+ ++++++++.|+.|++||+.+...
T Consensus 187 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~ 264 (366)
T 3k26_A 187 LWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDD 264 (366)
T ss_dssp EEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCC
T ss_pred EEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccc
Confidence 9998743 77788999998 77999999999999999877543
Q ss_pred -------------eeeee-cCCcEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCe
Q psy10953 122 -------------MHTFK-HADQVWCVCVAPD--GDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 122 -------------~~~~~-~~~~v~~~~~sp~--g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
+..+. |...|++++|+|+ +++|++++.|+.|++|++..++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 265 IDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp GGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred ccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 33443 6678999999999 9999999999999999998764
No 73
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.9e-24 Score=170.43 Aligned_cols=154 Identities=15% Similarity=0.287 Sum_probs=135.2
Q ss_pred eEEEEEEcCCCCEE-EEEeCCCcEEEEeCC--CCcEEEEEe--cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC---
Q psy10953 13 DMWNVVFSPDDKYV-LSGSQSGKINLYGVE--TGKLEQIFD--TRGKFTLSIAYSTDGHWIASGALDGIINIFDANT--- 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~--~~~~~~~~~--~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--- 84 (181)
.+++++|+|+|++| ++++.|++|++||+. +++....+. .+...+.+++|+|++++|++++.++.+++|++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 58999999999996 899999999999998 888877765 3456678999999999999999999999999753
Q ss_pred ---------CCcccEEEEEEcCC---CCEEEEEeCCCcEEEEecCCCceeeee--ecCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 85 ---------GHSSWVLSTAFTRD---GKFFISASADHTVRVWNFARRENMHTF--KHADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 85 ---------~~~~~v~~~~~s~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
+|...|.+++|+|+ +++|++++.|+.|++||+.++..+..+ .|...|++++|+ ++++|++++.|+
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~ 262 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD 262 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC
Confidence 25567999999999 999999999999999999988877663 478899999999 999999999999
Q ss_pred cEEEEeCCCCeeEEEcC
Q psy10953 151 AVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~~ 167 (181)
.|++|++.+++.+....
T Consensus 263 ~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 263 KIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEeeeec
Confidence 99999999987665443
No 74
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.8e-24 Score=168.12 Aligned_cols=161 Identities=16% Similarity=0.322 Sum_probs=133.7
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEee--CCCcEEEE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGA--LDGIINIF 80 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~--~d~~v~i~ 80 (181)
+..+..+...+.+++|+|++++|++++.|++|++||+++++....+..+...+.+++|+|++. .+++++ .|+.+++|
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 445566777899999999999999999999999999999998888877777788999999875 455554 79999999
Q ss_pred eCCCC-------CcccEEEEEEcCCCCEEEEE--eCCCcEEEEecCCCceeee--e-ecCCcEEEEEEccCCCEEEEEcC
Q psy10953 81 DANTG-------HSSWVLSTAFTRDGKFFISA--SADHTVRVWNFARRENMHT--F-KHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 81 d~~~~-------~~~~v~~~~~s~~~~~l~~~--~~d~~i~v~d~~~~~~~~~--~-~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
|+.++ +...+.+++|+|++++++++ +.|+.|++||+.++..... + .|...|.+++|+|+|+++++++.
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 99765 34578999999999999985 4899999999988654443 3 37788999999999999999999
Q ss_pred CCcEEEEeCCCCeeEE
Q psy10953 149 DKAVHMYSYKPEEEVE 164 (181)
Q Consensus 149 d~~v~i~~~~~~~~~~ 164 (181)
|+.|++|++.+++.+.
T Consensus 370 dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 370 DENLKFWRVYDGDHVK 385 (401)
T ss_dssp TSEEEEEECCC-----
T ss_pred CCcEEEEECCCCcccc
Confidence 9999999998877654
No 75
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-24 Score=174.27 Aligned_cols=148 Identities=14% Similarity=0.153 Sum_probs=123.1
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-----eEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-----FTLSIAYSTDGHWIASGALDGIINIFDANTG 85 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~ 85 (181)
...+.+++|||||++||+++.||+|++||.++ ++..+. +.. .+.+++|||||++|++|+.||.|++||+..+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 56699999999999999999999999999644 555555 443 3779999999999999999999999997643
Q ss_pred -------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce---eeee--ecCCcEEEEEEccCCC
Q psy10953 86 -------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN---MHTF--KHADQVWCVCVAPDGD 141 (181)
Q Consensus 86 -------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~--~~~~~v~~~~~sp~g~ 141 (181)
|..+|.+++|+|+| +++++.|+.+++||+..+.. ..++ .|...|++++|+ |+
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY 237 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC
Confidence 34589999999999 78889999999999987763 2344 366789999999 68
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 142 KFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
.+++++ ++.|++|++..++.....
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEEE
T ss_pred EEEEEe-CCeEEEEECCCCeEEEEE
Confidence 898887 699999999887774444
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.8e-26 Score=191.48 Aligned_cols=153 Identities=14% Similarity=0.158 Sum_probs=126.3
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEE--EEEe---------cCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLE--QIFD---------TRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~--~~~~---------~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
+...+..++|+|+|++|++|+.|++|++||+.++.+. ..+. .|...+.+++|+|||++||+|+.|++|+
T Consensus 434 ~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~ 513 (902)
T 2oaj_A 434 GVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVV 513 (902)
T ss_dssp SBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEE
Confidence 3444566788999999999999999999999887532 1111 4556788999999999999999999999
Q ss_pred EEeCCC-----------------------------------------------------CCcccEEEEEEcCCCCEEEEE
Q psy10953 79 IFDANT-----------------------------------------------------GHSSWVLSTAFTRDGKFFISA 105 (181)
Q Consensus 79 i~d~~~-----------------------------------------------------~~~~~v~~~~~s~~~~~l~~~ 105 (181)
+||+.+ +|...|.+++|+|+| +|+++
T Consensus 514 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsg 592 (902)
T 2oaj_A 514 LFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIA 592 (902)
T ss_dssp EEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEE
T ss_pred EEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEE
Confidence 999743 367789999999999 99999
Q ss_pred eCCCcEEEEecCCCceee-----ee--ecCCcEEEEEEc-----cCC---CEEEEEcCCCcEEEEeC---CCCeeE
Q psy10953 106 SADHTVRVWNFARRENMH-----TF--KHADQVWCVCVA-----PDG---DKFVSVGEDKAVHMYSY---KPEEEV 163 (181)
Q Consensus 106 ~~d~~i~v~d~~~~~~~~-----~~--~~~~~v~~~~~s-----p~g---~~l~~~~~d~~v~i~~~---~~~~~~ 163 (181)
+.|++|++||++++..+. .+ .|...|++++|+ ||| ++|++++.|+.|++|++ .+|+..
T Consensus 593 s~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 593 YAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp ETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred eCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 999999999998876543 12 466789999999 886 89999999999999998 555433
No 77
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-24 Score=168.64 Aligned_cols=154 Identities=16% Similarity=0.264 Sum_probs=136.8
Q ss_pred ccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcEEEEEecC------CceEEEEEECCCC-CEEEEeeCCC---c
Q psy10953 8 NVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGKLEQIFDTR------GKFTLSIAYSTDG-HWIASGALDG---I 76 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s~d~-~~l~~~~~d~---~ 76 (181)
..+...+.+++|+|+ +.++++++.|++|++||+++++....+..+ ...+.+++|+|++ .++++++.|+ .
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 446667899999999 789999999999999999999988877765 5668899999997 6899999998 9
Q ss_pred EEEEeCCC----------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCC-CEE
Q psy10953 77 INIFDANT----------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDG-DKF 143 (181)
Q Consensus 77 v~i~d~~~----------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g-~~l 143 (181)
+++||++. +|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+. |...|++++|+|++ +++
T Consensus 242 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEE
Confidence 99999864 4667899999999 89999999999999999999998888776 77889999999999 899
Q ss_pred EEEcCCCcEEEEeCCCCe
Q psy10953 144 VSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~~~ 161 (181)
++++.|+.|++|++....
T Consensus 322 ~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECCSSSEEEEEESCCCC
T ss_pred EEEecCCcEEEEEccCCC
Confidence 999999999999997654
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=9.9e-24 Score=166.24 Aligned_cols=164 Identities=15% Similarity=0.344 Sum_probs=141.6
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEEC--CCCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYS--TDGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s--~d~~~l~~~~~d~~v~i~ 80 (181)
.+..+..+...+++++|+|++ ++++|+.|++|++||+++++....+..+...+.+++|+ ++++++++++.|+.+++|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 355666788889999999988 89999999999999999999988888787778888887 688999999999999999
Q ss_pred eCCCCC-------------------------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cC
Q psy10953 81 DANTGH-------------------------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HA 128 (181)
Q Consensus 81 d~~~~~-------------------------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 128 (181)
|+.+.. ...+.+ ++++++++++++.|+.|++||+.+++.+..+. |.
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEE--EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEE--EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 986432 223433 47889999999999999999999998887776 78
Q ss_pred CcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 129 DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 129 ~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
..|.+++|+|+++++++++.|+.|++|++.+++.+....+.
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 88999999999999999999999999999998887666543
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=170.41 Aligned_cols=158 Identities=13% Similarity=0.302 Sum_probs=129.9
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEE-------EecCCceEEEEEECCCC-CEEEEeeCCCcEE
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQI-------FDTRGKFTLSIAYSTDG-HWIASGALDGIIN 78 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~-------~~~~~~~~~~~~~s~d~-~~l~~~~~d~~v~ 78 (181)
..+...+.+++|+|++++|++| .|++|++||++ .++.... +..+...+.+++|+|++ ++|++++.|+.|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 4567778999999999999998 79999999998 4444443 33456678899999998 9999999999999
Q ss_pred EEeCCCCC------------cc------------cEEEEEEcCCCCEEEEEeCCCcEEEEecCC-CceeeeeecCCc---
Q psy10953 79 IFDANTGH------------SS------------WVLSTAFTRDGKFFISASADHTVRVWNFAR-RENMHTFKHADQ--- 130 (181)
Q Consensus 79 i~d~~~~~------------~~------------~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~--- 130 (181)
+||++++. .. .|.+++|+|+|++|++++. +.|++||++. ++.+..+.....
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccc
Confidence 99987533 22 7999999999999999998 9999999987 666666653222
Q ss_pred -------------EEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 131 -------------VWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 131 -------------v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
+..++|+|++++|++++.|+.|++|++.+++.+.+..
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 381 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEA 381 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEEC
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeee
Confidence 2348999999999999999999999999887765443
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.2e-23 Score=163.54 Aligned_cols=156 Identities=23% Similarity=0.339 Sum_probs=136.3
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
+...+.+++|+|++++|++|+.|+.|++||+.+++....+..+...+.+++| ++..|++++.|+.+++||++.
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence 4566899999999999999999999999999999998888888888888988 568999999999999999973
Q ss_pred ----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCE-EEEEc--CCCcEEEEe
Q psy10953 85 ----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDK-FVSVG--EDKAVHMYS 156 (181)
Q Consensus 85 ----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~-l~~~~--~d~~v~i~~ 156 (181)
+|...|.+++|+|+++++++++.|+.|++||++++..+..+. |...|.+++|+|++.. +++++ .|+.|++|+
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 467789999999999999999999999999999988777764 7788999999998755 55554 699999999
Q ss_pred CCCCeeEEEcC
Q psy10953 157 YKPEEEVEVNG 167 (181)
Q Consensus 157 ~~~~~~~~~~~ 167 (181)
+.++..+....
T Consensus 291 ~~~~~~~~~~~ 301 (401)
T 4aez_A 291 AATGARVNTVD 301 (401)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 98887765443
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=3.1e-24 Score=166.64 Aligned_cols=159 Identities=18% Similarity=0.318 Sum_probs=135.9
Q ss_pred ceeeeccCeeeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcEEEEE--ecCCceEEEEEECCCCCEEEEeeCCCcEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDD-KYVLSGSQSGKINLYGVETGKLEQIF--DTRGKFTLSIAYSTDGHWIASGALDGIINI 79 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i 79 (181)
.+..+..+...+.+++|+|++ ++|++++.|++|++||+++++....+ ..+...+.+++|+|++++|++++.|+.+++
T Consensus 123 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 202 (402)
T 2aq5_A 123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRV 202 (402)
T ss_dssp CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEE
Confidence 456677788889999999998 69999999999999999999988888 567777889999999999999999999999
Q ss_pred EeCCCC---------Cccc-EEEEEEcCCCCEEEEE---eCCCcEEEEecCCCce-e--eeeecCCcEEEEEEccCCCEE
Q psy10953 80 FDANTG---------HSSW-VLSTAFTRDGKFFISA---SADHTVRVWNFARREN-M--HTFKHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 80 ~d~~~~---------~~~~-v~~~~~s~~~~~l~~~---~~d~~i~v~d~~~~~~-~--~~~~~~~~v~~~~~sp~g~~l 143 (181)
||++++ |... +..+.|+|++++++++ +.|+.|++||+++... + ....+...+.+++|+|+++++
T Consensus 203 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 203 IEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp EETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEE
T ss_pred EeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEE
Confidence 998743 3333 7889999999999999 7899999999987654 2 233466789999999999998
Q ss_pred EE-EcCCCcEEEEeCCCCe
Q psy10953 144 VS-VGEDKAVHMYSYKPEE 161 (181)
Q Consensus 144 ~~-~~~d~~v~i~~~~~~~ 161 (181)
++ ++.|+.|++|++..++
T Consensus 283 ~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEETTCSCEEEEEECSST
T ss_pred EEEEcCCCeEEEEEecCCC
Confidence 65 5579999999998876
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.5e-23 Score=160.97 Aligned_cols=157 Identities=21% Similarity=0.384 Sum_probs=137.3
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
+...+.+++|+|++++|++++.|+.|++|| .+++....+..+...+.+++|+|++++|++++.|+.+++||+.+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 345789999999999999999999999999 66777777777778888999999999999999999999999742
Q ss_pred -----------------------------------------------------------CCcccEEEEEEcCCCCEEEEE
Q psy10953 85 -----------------------------------------------------------GHSSWVLSTAFTRDGKFFISA 105 (181)
Q Consensus 85 -----------------------------------------------------------~~~~~v~~~~~s~~~~~l~~~ 105 (181)
.|...|.+++|+|++++|+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 134567889999999999999
Q ss_pred eCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 106 SADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 106 ~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+.|+.|++||+.+++.+..+. |...+.+++|+|++ .+++++.|+.|++|++..+..+.....
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 999999999999988777775 77889999999999 999999999999999988877654443
No 83
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.7e-24 Score=180.68 Aligned_cols=152 Identities=12% Similarity=0.166 Sum_probs=133.1
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
+...+.+++|+| |++|++++.|++|++||+++++.+..+..+ ..+.+++|+|++++|++|+.||.|++||+.++
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~-~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVP-GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECS-SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCC-CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 455689999999 889999999999999999999988777644 45789999999999999999999999998642
Q ss_pred ---------------CcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeeec-------------------CCc
Q psy10953 86 ---------------HSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTFKH-------------------ADQ 130 (181)
Q Consensus 86 ---------------~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------------------~~~ 130 (181)
|...|.+++|+|+ +..+++++.|+.| +||+++++.+..+.. ...
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence 4567899999996 4789999999999 999999887766642 367
Q ss_pred EEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 131 VWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 131 v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
|++++|+|+|++|++++.|+.|++||+.+++.+.
T Consensus 214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 9999999999999999999999999999887765
No 84
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.2e-24 Score=164.59 Aligned_cols=155 Identities=14% Similarity=0.124 Sum_probs=136.4
Q ss_pred CcceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc----EEEEEecCCceEEEEEECCCCC-EEEEeeCCC
Q psy10953 1 MKQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGK----LEQIFDTRGKFTLSIAYSTDGH-WIASGALDG 75 (181)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~ 75 (181)
|+.+.....+...+++++|+|++++|++++.|++|++|++.+++ .... ..+...+.+++|+|+++ +|++++.|+
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg 79 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS-LRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE-EECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee-eecCCceEEEEECCCCCcEEEEEcCCC
Confidence 55666667788889999999999999999999999999998877 4333 35666788999999999 999999999
Q ss_pred cEEEEeC-CC-------C--CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC---------CceeeeeecCCcEEEEEE
Q psy10953 76 IINIFDA-NT-------G--HSSWVLSTAFTRDGKFFISASADHTVRVWNFAR---------RENMHTFKHADQVWCVCV 136 (181)
Q Consensus 76 ~v~i~d~-~~-------~--~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~v~~~~~ 136 (181)
.|++||+ .. + |...|.+++|+| ++++++++.|+.|++||+++ .+.+..+.+...+.+++|
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred eEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 9999999 53 4 778899999999 99999999999999999987 666667778889999999
Q ss_pred ccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 137 APDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 137 sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+|++ +++++.++.|++|++..
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSC
T ss_pred cCCc--EEEEeCCCeEEEEECCc
Confidence 9988 88899999999999987
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=4.4e-24 Score=178.30 Aligned_cols=165 Identities=22% Similarity=0.391 Sum_probs=146.2
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+..+...+.+++|+|++++|++++.|++|++||+.+++....+..+...+.+++|+|++++|++++.|+.+++||+
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 45666778888999999999999999999999999999999999888888888889999999999999999999999998
Q ss_pred CC---------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEcc--CCCEEEEEcC
Q psy10953 83 NT---------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAP--DGDKFVSVGE 148 (181)
Q Consensus 83 ~~---------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp--~g~~l~~~~~ 148 (181)
.+ +|...|.+++|+| +++.+++++.|+.|++||+..+.....+. +...+.+++|+| +++++++++.
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 64 3667899999999 88999999999999999998877666554 347899999999 9999999999
Q ss_pred CCcEEEEeCCCCeeEEEcC
Q psy10953 149 DKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 149 d~~v~i~~~~~~~~~~~~~ 167 (181)
|+.|++|++.++..+....
T Consensus 207 dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 207 DLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp TSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEc
Confidence 9999999998887665444
No 86
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=4.2e-24 Score=164.74 Aligned_cols=163 Identities=17% Similarity=0.301 Sum_probs=137.4
Q ss_pred eeeeccC-----eeeEEEEEEc----CCCCE-EEEEeCCCcEEEEeCCC------CcEEE-----EEe-------cCCce
Q psy10953 4 ISKINVG-----PVDMWNVVFS----PDDKY-VLSGSQSGKINLYGVET------GKLEQ-----IFD-------TRGKF 55 (181)
Q Consensus 4 ~~~~~~~-----~~~~~~~~~s----~~g~~-l~~~~~d~~i~~~d~~~------~~~~~-----~~~-------~~~~~ 55 (181)
+..+..+ ...+.+++|+ |++++ |++++.|+.|++||+++ ++... .+. .+...
T Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 4555555 4779999999 99999 99999999999999988 65544 553 25566
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCC--------C---C---cccEEEEEEcCCCCEEEEEeCC---CcEEEEecCC
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANT--------G---H---SSWVLSTAFTRDGKFFISASAD---HTVRVWNFAR 118 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------~---~---~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~ 118 (181)
+.+++|+|++ .|++++.|+.+++||+++ . | ...+.+++|+|++++|++++.| +.|++||+++
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 7799999999 999999999999999874 3 6 7789999999999999999999 9999999999
Q ss_pred Cceeeeee--------------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 119 RENMHTFK--------------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 119 ~~~~~~~~--------------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
++.+..+. |...|.+++|+|++++|++++.|+.|++|++.+++.+....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 88777764 67889999999999999999999999999999988776554
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=1e-23 Score=170.61 Aligned_cols=165 Identities=19% Similarity=0.298 Sum_probs=144.9
Q ss_pred cceeeeccCeee-EEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC--------cEEEEEecCCceEEEEEECCCCCEEEE
Q psy10953 2 KQISKINVGPVD-MWNVVFSP--DDKYVLSGSQSGKINLYGVETG--------KLEQIFDTRGKFTLSIAYSTDGHWIAS 70 (181)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~--------~~~~~~~~~~~~~~~~~~s~d~~~l~~ 70 (181)
+.+..+..+... +.+++|+| ++++|++++.|++|++||+.++ +....+..+...+.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 356677778888 99999999 9999999999999999999755 555666667777889999999999999
Q ss_pred eeCC----CcEEEEeCC------CCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeee-cCC---cEEEEE
Q psy10953 71 GALD----GIINIFDAN------TGHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFK-HAD---QVWCVC 135 (181)
Q Consensus 71 ~~~d----~~v~i~d~~------~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~---~v~~~~ 135 (181)
++.+ +.+.+||.. .+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+. |.. .|.+++
T Consensus 134 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp EECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred eccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEE
Confidence 9887 689999854 35778899999999998 89999999999999999988887776 667 899999
Q ss_pred EccC-CCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 136 VAPD-GDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 136 ~sp~-g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
|+|+ ++++++++.|+.|++|++.+++.+...
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 9999 999999999999999999988877765
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.4e-25 Score=176.42 Aligned_cols=143 Identities=12% Similarity=0.142 Sum_probs=116.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-----------------------------EEEEEe-cCCceEEEEEECC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGK-----------------------------LEQIFD-TRGKFTLSIAYST 63 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~-----------------------------~~~~~~-~~~~~~~~~~~s~ 63 (181)
+.+++|||||+++|+++.|++|+ |...++ ....+. .+...+.+++|||
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSP 95 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSP 95 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECS
T ss_pred EEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECC
Confidence 78999999999999999999995 332222 111111 2255688999999
Q ss_pred CCCEEEEeeCCCcEEEEeCC------CCCcc-----cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce-------eeee
Q psy10953 64 DGHWIASGALDGIINIFDAN------TGHSS-----WVLSTAFTRDGKFFISASADHTVRVWNFARREN-------MHTF 125 (181)
Q Consensus 64 d~~~l~~~~~d~~v~i~d~~------~~~~~-----~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-------~~~~ 125 (181)
||++|++++.||.|++||.. . |.. .+.+++|||+|++|++++.||.|++||+.++.. +.++
T Consensus 96 dG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 96 IDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp SSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 99999999999999999942 2 443 599999999999999999999999999988752 3443
Q ss_pred e-----cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 126 K-----HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 126 ~-----~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
. |...|.+++|+||| +++++.|+.|++|++..+.
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 2 55689999999999 8888899999999998766
No 89
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=8.2e-24 Score=160.88 Aligned_cols=153 Identities=23% Similarity=0.387 Sum_probs=131.7
Q ss_pred cCeeeEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCcEEEEEec-----CCceEEEEEECCC----CCEEEEeeCCC
Q psy10953 9 VGPVDMWNVVFSPD----DKYVLSGSQSGKINLYGVETGKLEQIFDT-----RGKFTLSIAYSTD----GHWIASGALDG 75 (181)
Q Consensus 9 ~~~~~~~~~~~s~~----g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~s~d----~~~l~~~~~d~ 75 (181)
.+...+++++|+|+ ...+++++.++.|++||+.+++....+.. +...+.+++|+|+ +++|++++.|+
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 57778999999984 55666777778999999998877655543 3355789999999 67899999999
Q ss_pred cEEEEeCCC--------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeee----ecCCcEEEEEEccCCCE
Q psy10953 76 IINIFDANT--------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTF----KHADQVWCVCVAPDGDK 142 (181)
Q Consensus 76 ~v~i~d~~~--------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~----~~~~~v~~~~~sp~g~~ 142 (181)
.|++||+.+ +|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+ .|...|.+++|+|++++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEK 175 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSE
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCE
Confidence 999999874 3677899999999 8999999999999999999998887776 47889999999999999
Q ss_pred EEEEcCCCcEEEEeCCCCe
Q psy10953 143 FVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~~~ 161 (181)
|++++.|+.|++|++..++
T Consensus 176 l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EEEEETTSCEEEEESCSHH
T ss_pred EEEecCCCCEEEEECCCCc
Confidence 9999999999999998654
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=6.8e-24 Score=161.00 Aligned_cols=148 Identities=17% Similarity=0.338 Sum_probs=125.2
Q ss_pred eEEEEE----EcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC---CCCEEEEeeCCCcEEEEeCCC-
Q psy10953 13 DMWNVV----FSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST---DGHWIASGALDGIINIFDANT- 84 (181)
Q Consensus 13 ~~~~~~----~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~---d~~~l~~~~~d~~v~i~d~~~- 84 (181)
.+++++ |+|+++++++++.|+.|++||+++++...... +...+.+++|+| ++.+|++++.|+.+++||++.
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN-IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC-CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 577777 78999999999999999999999998765543 455678999999 999999999999999999752
Q ss_pred ------------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCc-------------------eeeeee-cCCcE
Q psy10953 85 ------------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRE-------------------NMHTFK-HADQV 131 (181)
Q Consensus 85 ------------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~-------------------~~~~~~-~~~~v 131 (181)
+|...|.+++|+|+++ ++++++.|+.|++||+.... .+..+. |...|
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence 5778899999999998 89999999999999987532 333343 77889
Q ss_pred EEEEEccCCCEEE-EEcCCCcEEEEeCCCCe
Q psy10953 132 WCVCVAPDGDKFV-SVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 132 ~~~~~sp~g~~l~-~~~~d~~v~i~~~~~~~ 161 (181)
++++|+|++++++ +++.|+.|++|++....
T Consensus 325 ~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 325 SSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999999999998 79999999999997654
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=4.2e-23 Score=159.07 Aligned_cols=155 Identities=21% Similarity=0.348 Sum_probs=129.3
Q ss_pred CeeeEEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEEEeCCC-
Q psy10953 10 GPVDMWNVVFSP---DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINIFDANT- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~---~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i~d~~~- 84 (181)
.+..+..+.++| ++.++++++.|+.|++||+++++....+..+...+.+++|+|+++ .|++++.|+.+++||++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 140 FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 344567888888 455999999999999999999998888887777888999999998 588999999999999853
Q ss_pred -----------------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc---------------------
Q psy10953 85 -----------------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRE--------------------- 120 (181)
Q Consensus 85 -----------------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~--------------------- 120 (181)
.|...|.+++|+|+++++++++.|+.|++||+.+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
T 4a11_B 220 SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV 299 (408)
T ss_dssp SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE
T ss_pred CcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEE
Confidence 356789999999999999999999999999987543
Q ss_pred --------------------------eeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 121 --------------------------NMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 121 --------------------------~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
.+..+. |...|.+++|+|++++|++++.|+.|++|++.+++++.
T Consensus 300 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 300 SCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp CCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred ecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 222333 66789999999999999999999999999999887665
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-24 Score=173.12 Aligned_cols=154 Identities=13% Similarity=0.176 Sum_probs=126.3
Q ss_pred ccCeeeEEEEEEcCC------CCEEEEEeCCCcEEEEeCCCCcEE-----------EEEecCCceEEEEEECCCCCEEEE
Q psy10953 8 NVGPVDMWNVVFSPD------DKYVLSGSQSGKINLYGVETGKLE-----------QIFDTRGKFTLSIAYSTDGHWIAS 70 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~------g~~l~~~~~d~~i~~~d~~~~~~~-----------~~~~~~~~~~~~~~~s~d~~~l~~ 70 (181)
..+...++.++|+|+ +++||+++.|++|++||+.+++.. ..+..+...+.+++|++++ .|++
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las 282 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC 282 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE
Confidence 334456899999997 579999999999999999866421 2445566778899999864 7999
Q ss_pred eeCCCcEEEEeCCC---------CCcccEEEE--EEcCCC-CEEEEEeCCCcEEEEecCCCceeeeee-cC--CcEEEEE
Q psy10953 71 GALDGIINIFDANT---------GHSSWVLST--AFTRDG-KFFISASADHTVRVWNFARRENMHTFK-HA--DQVWCVC 135 (181)
Q Consensus 71 ~~~d~~v~i~d~~~---------~~~~~v~~~--~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~--~~v~~~~ 135 (181)
|+.||+|++||+++ +|...|.++ +|+|+| ++|++++.|++|++||+++++....+. |. ..+++++
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceE
Confidence 99999999999863 366789988 678888 899999999999999999877655443 33 2478999
Q ss_pred EccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 136 VAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 136 ~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
|+|+++.+++++.|+.|++|++..+..
T Consensus 363 fsp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 363 YCPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred eCCCcCeEEEeCCCCcEEEEECccccc
Confidence 999999999999999999999987654
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4e-24 Score=165.66 Aligned_cols=166 Identities=14% Similarity=0.272 Sum_probs=139.0
Q ss_pred ceeeeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCc------EEEE---EecCCceEEEEEECCC-CCEEEEe
Q psy10953 3 QISKINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGK------LEQI---FDTRGKFTLSIAYSTD-GHWIASG 71 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~------~~~~---~~~~~~~~~~~~~s~d-~~~l~~~ 71 (181)
.+..+..+...+.+++|+|+ +++|++++.|++|++||+.+++ .... +..+...+.+++|+|+ +.+|+++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 45566677888999999998 8999999999999999998876 2222 2345566779999999 7899999
Q ss_pred eCCCcEEEEeCCCC--------C------cccEEEEEEcCCC-CEEEEEeCCC---cEEEEecCCC-ceeeeee--cCCc
Q psy10953 72 ALDGIINIFDANTG--------H------SSWVLSTAFTRDG-KFFISASADH---TVRVWNFARR-ENMHTFK--HADQ 130 (181)
Q Consensus 72 ~~d~~v~i~d~~~~--------~------~~~v~~~~~s~~~-~~l~~~~~d~---~i~v~d~~~~-~~~~~~~--~~~~ 130 (181)
+.|+.+++||++++ + ...+.+++|+|++ +++++++.|+ .|++||++++ .....+. |...
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 99999999998743 2 5679999999997 6899999998 9999999986 4555554 7788
Q ss_pred EEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 131 VWCVCVAP-DGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 131 v~~~~~sp-~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
|.+++|+| ++++|++++.|+.|++|++.+++.+....+
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 99999999 999999999999999999998877665443
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=2.6e-23 Score=162.57 Aligned_cols=159 Identities=19% Similarity=0.362 Sum_probs=132.8
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE----EEEEecCCceEEEEEECCCCC-EEEE--eeCCCc
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL----EQIFDTRGKFTLSIAYSTDGH-WIAS--GALDGI 76 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~s~d~~-~l~~--~~~d~~ 76 (181)
+..+..+...+..+.++|+|+++++++.|+.+++|+..+++. ......+...+.+++|+|++. .+++ |+.|+.
T Consensus 223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~ 302 (420)
T 4gga_A 223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 302 (420)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE
T ss_pred eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE
Confidence 455666777889999999999999999999999999987653 234445666778999999764 4444 457999
Q ss_pred EEEEeCCCC-------CcccEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEE
Q psy10953 77 INIFDANTG-------HSSWVLSTAFTRDGKFFISAS--ADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 77 v~i~d~~~~-------~~~~v~~~~~s~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~ 146 (181)
|++||+.++ +...+..+.|+|+++.+++++ .|+.|++||+.+++.+..+. |.+.|++++|+|+|++|+++
T Consensus 303 I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 303 IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 999999865 345688899999999887765 68999999999999888886 88999999999999999999
Q ss_pred cCCCcEEEEeCCCCee
Q psy10953 147 GEDKAVHMYSYKPEEE 162 (181)
Q Consensus 147 ~~d~~v~i~~~~~~~~ 162 (181)
+.|+.|++|++....+
T Consensus 383 s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 383 AADETLRLWRCFELDP 398 (420)
T ss_dssp ETTTEEEEECCSCSSC
T ss_pred ecCCeEEEEECCCCCc
Confidence 9999999999876443
No 95
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.2e-23 Score=155.51 Aligned_cols=156 Identities=23% Similarity=0.429 Sum_probs=133.1
Q ss_pred ceeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
.+..+..+...+.+++|+| +++++++++.|+.|++|| .++....+.. +...+.+++|+|++. +++++.|+.+++|
T Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~ 210 (313)
T 3odt_A 134 LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLV 210 (313)
T ss_dssp EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEE
T ss_pred EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEE
Confidence 3455666777889999988 999999999999999999 4555555555 667788999999998 9999999999999
Q ss_pred eCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 81 DANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 81 d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
|+++ +|...|.+++|+|++ .+++++.|+.|++||+.+++.+..+. +...+++++|+|+++ +++++.|+.
T Consensus 211 d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 211 DMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSC
T ss_pred ECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCc
Confidence 9975 367789999999999 58899999999999999998887776 666899999999998 566889999
Q ss_pred EEEEeCCCCeeE
Q psy10953 152 VHMYSYKPEEEV 163 (181)
Q Consensus 152 v~i~~~~~~~~~ 163 (181)
|++|++.+++.+
T Consensus 289 i~iw~~~~~~~~ 300 (313)
T 3odt_A 289 VRIFSQEKSRWA 300 (313)
T ss_dssp EEEEESCGGGCC
T ss_pred EEEEeCCCCcee
Confidence 999999876543
No 96
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=9.1e-24 Score=165.79 Aligned_cols=154 Identities=16% Similarity=0.296 Sum_probs=131.5
Q ss_pred eeccCeeeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCC----------CcEEEEEecCCceEEEEEECCCCC-EEEEeeC
Q psy10953 6 KINVGPVDMWNVVFSPD-DKYVLSGSQSGKINLYGVET----------GKLEQIFDTRGKFTLSIAYSTDGH-WIASGAL 73 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~----------~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~ 73 (181)
....+...+.+++|+|+ ++++++++.||.|++||+.. .+....+..|...+.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34445667889999997 77899999999999999976 455566667777778999999998 9999999
Q ss_pred CCcEEEEeCCC---------------CCcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCC---ceeeee-ecCCcEEE
Q psy10953 74 DGIINIFDANT---------------GHSSWVLSTAFTR-DGKFFISASADHTVRVWNFARR---ENMHTF-KHADQVWC 133 (181)
Q Consensus 74 d~~v~i~d~~~---------------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~---~~~~~~-~~~~~v~~ 133 (181)
||.|++||+.. +|...|.+++|+| ++.++++++.|+.|++||+++. ..+..+ .|...|++
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEE
Confidence 99999999875 4667799999999 6789999999999999999976 345555 47788999
Q ss_pred EEEccCCC-EEEEEcCCCcEEEEeCCC
Q psy10953 134 VCVAPDGD-KFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 134 ~~~sp~g~-~l~~~~~d~~v~i~~~~~ 159 (181)
++|+|+++ .+++++.|+.|++|++..
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 99999997 688999999999999986
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.4e-24 Score=167.10 Aligned_cols=154 Identities=14% Similarity=0.250 Sum_probs=129.4
Q ss_pred EEEEE--EcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 14 MWNVV--FSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 14 ~~~~~--~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
+.++. ++|+++++++++.|++|++||+++++....+.. +...+.+++|+|++++|++++.|+.|++||++.
T Consensus 171 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 171 AVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp EEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 44444 668899999999999999999999999888876 566788999999999999999999999999864
Q ss_pred ----CCcccEEEEEEc----CCCCEEEEEeCCCcEEEEecCCCceeeeee---------------------------cCC
Q psy10953 85 ----GHSSWVLSTAFT----RDGKFFISASADHTVRVWNFARRENMHTFK---------------------------HAD 129 (181)
Q Consensus 85 ----~~~~~v~~~~~s----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---------------------------~~~ 129 (181)
.|...|.+++|+ |+++++++++.|+.|++||+.+++.+..+. |..
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 330 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLN 330 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGG
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCC
Confidence 345678899555 568899999999999999999887665554 445
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 130 QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
.|++++|+ ++++|++++.|+.|++|++.+++.+....+
T Consensus 331 ~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 331 ALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp GGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred ceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 68899999 778999999999999999998876554443
No 98
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=1.3e-23 Score=159.41 Aligned_cols=152 Identities=11% Similarity=0.239 Sum_probs=130.9
Q ss_pred CeeeEEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCc-EEEEEecCCceEEEE------EECCCCCEEEEeeCCCcEEE
Q psy10953 10 GPVDMWNVVFSPD---DKYVLSGSQSGKINLYGVETGK-LEQIFDTRGKFTLSI------AYSTDGHWIASGALDGIINI 79 (181)
Q Consensus 10 ~~~~~~~~~~s~~---g~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~------~~s~d~~~l~~~~~d~~v~i 79 (181)
+...+.+++|+|+ |++|++++.|+.|++||+.+++ ....+..+...+.++ +|+|++++|++++.|+.+++
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 4556899999999 7999999999999999999887 777777777777788 45789999999999999999
Q ss_pred EeCCCCC-------------cccEEEEE----EcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEcc---C
Q psy10953 80 FDANTGH-------------SSWVLSTA----FTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAP---D 139 (181)
Q Consensus 80 ~d~~~~~-------------~~~v~~~~----~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp---~ 139 (181)
||+..+. ...+.+++ |+|+++++++++.|+.|++||+++++......+...+.+++|+| +
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDIS 223 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCC
Confidence 9987542 22677777 78999999999999999999999988877777888999999999 9
Q ss_pred CCEEEEEcCCCcEEEEeCCCCe
Q psy10953 140 GDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 140 g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
++++++++.|+.|++|++..+.
T Consensus 224 ~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 224 MNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CCEEEEEESTTEEEEEEEEEEE
T ss_pred CCEEEEECCCCeEEEEeCcCCC
Confidence 9999999999999999986543
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.1e-23 Score=176.00 Aligned_cols=156 Identities=26% Similarity=0.339 Sum_probs=132.9
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCcEEEEEecCCceEEEEEECCC--CCEEEEeeCCCcEEEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE--TGKLEQIFDTRGKFTLSIAYSTD--GHWIASGALDGIINIF 80 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~v~i~ 80 (181)
..+..+...+.+++|+|+|+++++|+.||+|++||+. +++....+..|...+.+++|+|+ +++|++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 3456778889999999999999999999999999998 44566677777788889999988 9999999999999999
Q ss_pred eCCCC----------CcccEEEEEEcCC--CCEEEEEeCCCcEEEEecCCCcee--e-eeecCCcEEEEEEcc-------
Q psy10953 81 DANTG----------HSSWVLSTAFTRD--GKFFISASADHTVRVWNFARRENM--H-TFKHADQVWCVCVAP------- 138 (181)
Q Consensus 81 d~~~~----------~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~~--~-~~~~~~~v~~~~~sp------- 138 (181)
|+.++ |...|.+++|+|+ ++.+++++.|+.|++||++.+... . ...|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 98653 6778999999999 999999999999999999876322 2 224778899999999
Q ss_pred ------CCCEEEEEcCCCcEEEEeCCCC
Q psy10953 139 ------DGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 139 ------~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+++.+++++.|+.|++|++..+
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETT
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 5899999999999999998765
No 100
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=5.2e-23 Score=161.48 Aligned_cols=157 Identities=13% Similarity=0.269 Sum_probs=131.7
Q ss_pred eeeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC---cEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEE
Q psy10953 4 ISKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETG---KLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIIN 78 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~ 78 (181)
+..+..+...+.+++|+| ++.++++++.|+.|++||++++ +....+..+...+.+++|+|+++ .|++++.|+.|+
T Consensus 224 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~ 303 (430)
T 2xyi_A 224 KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303 (430)
T ss_dssp SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEE
Confidence 344556777799999999 7788999999999999999977 45566666777788999999997 688999999999
Q ss_pred EEeCCC---------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCC--------------ceeeeee-cCCcEEE
Q psy10953 79 IFDANT---------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARR--------------ENMHTFK-HADQVWC 133 (181)
Q Consensus 79 i~d~~~---------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~--------------~~~~~~~-~~~~v~~ 133 (181)
+||++. +|...|.+++|+|+++ +|++++.|+.|++||+... ..+..+. |...|++
T Consensus 304 vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 304 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp EEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred EEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 999975 3667899999999995 7999999999999999762 3333333 6778999
Q ss_pred EEEccCCC-EEEEEcCCCcEEEEeCCCC
Q psy10953 134 VCVAPDGD-KFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 134 ~~~sp~g~-~l~~~~~d~~v~i~~~~~~ 160 (181)
++|+|+++ ++++++.|+.|++|++...
T Consensus 384 ~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 384 FSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99999999 8999999999999998643
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.92 E-value=7.4e-23 Score=177.95 Aligned_cols=166 Identities=22% Similarity=0.371 Sum_probs=143.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC--CCCEEEEeeCCCcEEEE
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST--DGHWIASGALDGIINIF 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i~ 80 (181)
.+..+..+...+.+++|+|+|+++++++.|++|++||+.+++....+..+...+.+++|+| ++..+++++.|+.+++|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 4556677888899999999999999999999999999999999998888888888999999 55689999999999999
Q ss_pred eCCC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee---------------------------
Q psy10953 81 DANT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF--------------------------- 125 (181)
Q Consensus 81 d~~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------------------------- 125 (181)
|+.+ +|...|.+++|+|+++++++++.|+.|++||+.++.....+
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 808 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA 808 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT
T ss_pred ECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC
Confidence 9874 47788999999999999999999999999998765332211
Q ss_pred -----------------------------ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 126 -----------------------------KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 126 -----------------------------~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
.|...+.+++|+|+++++++++.|+.|++|++.++..+....+
T Consensus 809 dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 880 (1249)
T 3sfz_A 809 DGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG 880 (1249)
T ss_dssp TSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred CCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC
Confidence 2455688999999999999999999999999998877765554
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=8.2e-23 Score=157.44 Aligned_cols=157 Identities=17% Similarity=0.292 Sum_probs=133.9
Q ss_pred eeeccCeeeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEe-------------cCCceEEEEEECC-CCCEEE
Q psy10953 5 SKINVGPVDMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFD-------------TRGKFTLSIAYST-DGHWIA 69 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-------------~~~~~~~~~~~s~-d~~~l~ 69 (181)
..+..+...+.+++|+| ++++|++++.|++|++||+.+++....+. .+...+.+++|+| ++.+|+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 34455778899999999 99999999999999999999876654443 2566788999999 778999
Q ss_pred EeeCCCcEEEEeCCCC-------CcccEEEEEEcCC---CCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc
Q psy10953 70 SGALDGIINIFDANTG-------HSSWVLSTAFTRD---GKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP 138 (181)
Q Consensus 70 ~~~~d~~v~i~d~~~~-------~~~~v~~~~~s~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp 138 (181)
+++.|+.+++||+.++ +...+..+.++|. +.++++++.++.|++||+.+++.+..+. |...|.+++|+|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 9999999999999764 3456788889885 4599999999999999999988777776 788999999999
Q ss_pred CCC-EEEEEcCCCcEEEEeCCCCe
Q psy10953 139 DGD-KFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 139 ~g~-~l~~~~~d~~v~i~~~~~~~ 161 (181)
+++ .+++++.|+.|++|++..+.
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSS
T ss_pred CCCcEEEEEcCCCcEEEEECCCCC
Confidence 999 48899999999999997654
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=2.3e-23 Score=157.48 Aligned_cols=161 Identities=11% Similarity=0.133 Sum_probs=135.7
Q ss_pred eeecc--CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------CcEEEEEecCCceEEEEEECCCCCEEEEeeC
Q psy10953 5 SKINV--GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET---------GKLEQIFDTRGKFTLSIAYSTDGHWIASGAL 73 (181)
Q Consensus 5 ~~~~~--~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~ 73 (181)
..+.. +...+.+++|+| ++++++++.|+.|++||+++ ++....+. +...+.+++|+|++ +++++.
T Consensus 93 ~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~ 168 (342)
T 1yfq_A 93 QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMN 168 (342)
T ss_dssp EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEES
T ss_pred EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeC
Confidence 44555 777899999999 99999999999999999987 66555555 55567899999987 899999
Q ss_pred CCcEEEEeCCC-C----------CcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCC------ceeeeee-cCC-----
Q psy10953 74 DGIINIFDANT-G----------HSSWVLSTAFTR-DGKFFISASADHTVRVWNFARR------ENMHTFK-HAD----- 129 (181)
Q Consensus 74 d~~v~i~d~~~-~----------~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~------~~~~~~~-~~~----- 129 (181)
|+.+++||++. . +...+.+++|+| +++++++++.|+.+++|++... .....+. |..
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCC
T ss_pred CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccccc
Confidence 99999999976 3 345689999999 9999999999999999999876 5555554 433
Q ss_pred ----cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 130 ----QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 130 ----~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
.|.+++|+|++++|++++.|+.|++|++.+++.+....+.
T Consensus 249 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp SSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred ccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc
Confidence 8999999999999999999999999999988887765543
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.8e-23 Score=173.46 Aligned_cols=157 Identities=20% Similarity=0.370 Sum_probs=136.2
Q ss_pred eeeeccCeeeEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCc--EEEEEecCCceEEEEEECCC--CCEEEEeeCCCcE
Q psy10953 4 ISKINVGPVDMWNVVFSPD--DKYVLSGSQSGKINLYGVETGK--LEQIFDTRGKFTLSIAYSTD--GHWIASGALDGII 77 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~--g~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~d--~~~l~~~~~d~~v 77 (181)
+..+..+...+++++|+|+ +++|++|+.||+|++||+.+++ ....+..+...+.+++|+|+ ++.+++++.|+.|
T Consensus 46 ~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I 125 (753)
T 3jro_A 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 125 (753)
T ss_dssp EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcE
Confidence 4556677788999999988 9999999999999999999887 45556667777889999999 9999999999999
Q ss_pred EEEeCCCC----------CcccEEEEEEcC-------------CCCEEEEEeCCCcEEEEecCCCc----eeeeee-cCC
Q psy10953 78 NIFDANTG----------HSSWVLSTAFTR-------------DGKFFISASADHTVRVWNFARRE----NMHTFK-HAD 129 (181)
Q Consensus 78 ~i~d~~~~----------~~~~v~~~~~s~-------------~~~~l~~~~~d~~i~v~d~~~~~----~~~~~~-~~~ 129 (181)
++||+..+ |...|.+++|+| +++++++++.|+.|++||++.+. ....+. |..
T Consensus 126 ~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 205 (753)
T 3jro_A 126 SVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (753)
T ss_dssp EEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC
Confidence 99998653 567799999999 58999999999999999998763 333343 788
Q ss_pred cEEEEEEccC---CCEEEEEcCCCcEEEEeCCCC
Q psy10953 130 QVWCVCVAPD---GDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 130 ~v~~~~~sp~---g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.|++++|+|+ ++++++++.|+.|++|++..+
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 8999999999 899999999999999999775
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.1e-22 Score=150.17 Aligned_cols=151 Identities=26% Similarity=0.387 Sum_probs=132.8
Q ss_pred cceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 2 KQISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
+.+..+..+...+.+++| |++++|++++.|+.|++||+.+++....+..+...+.+++|+|++++|++++.|+.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 345677888889999999 9999999999999999999999988888888888888999999999999999999999999
Q ss_pred CCC-----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEcc-CCCEEEEEcC
Q psy10953 82 ANT-----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAP-DGDKFVSVGE 148 (181)
Q Consensus 82 ~~~-----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp-~g~~l~~~~~ 148 (181)
+.. +|...|.++.| +++++++++.|+.|++|| .......+. |...+.+++++| +++.+++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 753 36677888888 678999999999999999 444555554 778899999998 9999999999
Q ss_pred CCcEEEEeC
Q psy10953 149 DKAVHMYSY 157 (181)
Q Consensus 149 d~~v~i~~~ 157 (181)
|+.|++|+.
T Consensus 164 d~~i~i~d~ 172 (313)
T 3odt_A 164 DKTIKLWQN 172 (313)
T ss_dssp TSCEEEEET
T ss_pred CCCEEEEec
Confidence 999999994
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=2.8e-23 Score=157.83 Aligned_cols=161 Identities=14% Similarity=0.243 Sum_probs=133.3
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEE--CCCCCEEEEeeCCCcEEEEeC
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAY--STDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--s~d~~~l~~~~~d~~v~i~d~ 82 (181)
..+..+...+.+++|+|++++|++++.|++|++||+++++...... +...+.+++| ++++++|++++.|+.+++||+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 4455577779999999999999999999999999999998877554 5566778999 999999999999999999986
Q ss_pred CCCC----------------------------------------------------------------------------
Q psy10953 83 NTGH---------------------------------------------------------------------------- 86 (181)
Q Consensus 83 ~~~~---------------------------------------------------------------------------- 86 (181)
+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 159 RSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG 238 (368)
T ss_dssp SCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS
T ss_pred CCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC
Confidence 4210
Q ss_pred ----------------------cc------------cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcE
Q psy10953 87 ----------------------SS------------WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQV 131 (181)
Q Consensus 87 ----------------------~~------------~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v 131 (181)
.. .|.+++|+|++++|++++.|+.|++||+.+++.+..+. |...|
T Consensus 239 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v 318 (368)
T 3mmy_A 239 RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPI 318 (368)
T ss_dssp EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCE
T ss_pred cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCc
Confidence 01 48889999999999999999999999999998887776 77889
Q ss_pred EEEEEccCCCEEEEEcCCCcEE---EEeCCCCeeEEEc
Q psy10953 132 WCVCVAPDGDKFVSVGEDKAVH---MYSYKPEEEVEVN 166 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d~~v~---i~~~~~~~~~~~~ 166 (181)
++++|+|+|++|++++.|+..+ +|+.+....+.+.
T Consensus 319 ~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~~~~~i~~~ 356 (368)
T 3mmy_A 319 SACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLR 356 (368)
T ss_dssp EEEEECTTSSCEEEEECCCSTTCGGGCCTTSCCEEEEE
T ss_pred eEEEECCCCCeEEEEecccccccccccCCCccceeeeh
Confidence 9999999999999999886544 4445555555443
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.7e-23 Score=157.65 Aligned_cols=148 Identities=14% Similarity=0.130 Sum_probs=120.8
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCcEEEEEe-cCCceEEEEEECC--CCCEEEEeeCCCcEEE
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVE---------TGKLEQIFD-TRGKFTLSIAYST--DGHWIASGALDGIINI 79 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~---------~~~~~~~~~-~~~~~~~~~~~s~--d~~~l~~~~~d~~v~i 79 (181)
..+..+.|+|+ +++++.|++|++|+.. +++.+..+. .+...+.+++|+| +++++++++.|+.+++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 33556677877 8999999999999655 555444443 3445678999999 9999999999999999
Q ss_pred EeCCCC---------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee-eeee--cCCcEEEEEEccCCCEEEEEc
Q psy10953 80 FDANTG---------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM-HTFK--HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 80 ~d~~~~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~--~~~~v~~~~~sp~g~~l~~~~ 147 (181)
||++++ +...+.+++|+|+|+++++|+.|+.|++||+++++.+ ..+. |...|.+++|+|+|++|++++
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 998753 2346889999999999999999999999999998766 4453 688999999999999999999
Q ss_pred CCCcEEEEeCCCCeeE
Q psy10953 148 EDKAVHMYSYKPEEEV 163 (181)
Q Consensus 148 ~d~~v~i~~~~~~~~~ 163 (181)
++.|++||+..+..+
T Consensus 234 -~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 234 -DQTVVCFDLRKDVGT 248 (343)
T ss_dssp -SSBEEEEETTSSTTC
T ss_pred -CCeEEEEEcCCCCcc
Confidence 459999999876543
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.1e-22 Score=160.41 Aligned_cols=151 Identities=16% Similarity=0.173 Sum_probs=130.5
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEE----EEecCCceEEEEEECCC---CCEEEEeeCCCcEEEEe
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQ----IFDTRGKFTLSIAYSTD---GHWIASGALDGIINIFD 81 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~----~~~~~~~~~~~~~~s~d---~~~l~~~~~d~~v~i~d 81 (181)
..+..+.+++|+|+|++|++++.|+.+++|++.+++... .+..+...+.+++|+|+ +++|++++.|+.|++||
T Consensus 147 ~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd 226 (450)
T 2vdu_B 147 CFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH 226 (450)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred cCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence 345668999999999999999999999999998776543 55566777889999999 99999999999999999
Q ss_pred CCC---------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec-------------------------
Q psy10953 82 ANT---------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH------------------------- 127 (181)
Q Consensus 82 ~~~---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------------------------- 127 (181)
+.+ +|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+..
T Consensus 227 ~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp ESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred CCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 863 467789999999 999999999999999999999887766541
Q ss_pred -CCcEEEEEEccCCCEEEEEc-CCCcEEEEeC--CCC
Q psy10953 128 -ADQVWCVCVAPDGDKFVSVG-EDKAVHMYSY--KPE 160 (181)
Q Consensus 128 -~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~--~~~ 160 (181)
...+.+++++|+++++++++ .++.|++|++ ..+
T Consensus 306 ~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 306 IEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp BCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred ceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 23588999999999999998 7999999999 544
No 109
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=4.6e-22 Score=155.50 Aligned_cols=163 Identities=17% Similarity=0.331 Sum_probs=131.3
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC----------------------------------
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR---------------------------------- 52 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---------------------------------- 52 (181)
+..+...|.+++|+|+|++|++|+.|++|++||+++++.+..+..|
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHH 222 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeeccccee
Confidence 3445667999999999999999999999999999988765544332
Q ss_pred -------CceEEEEEECCCCCEEEEeeCCCcEEEEeCCC------------CCcccEEEEEEcCCCC-EEEE--EeCCCc
Q psy10953 53 -------GKFTLSIAYSTDGHWIASGALDGIINIFDANT------------GHSSWVLSTAFTRDGK-FFIS--ASADHT 110 (181)
Q Consensus 53 -------~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~------------~~~~~v~~~~~s~~~~-~l~~--~~~d~~ 110 (181)
...+..+.++|+++++++++.|+.+++|+... .|...|.+++|+|++. .+++ ++.|+.
T Consensus 223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~ 302 (420)
T 4gga_A 223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 302 (420)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE
T ss_pred eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE
Confidence 22344667778888888888888888888753 2456788999999764 5554 457899
Q ss_pred EEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc--CCCcEEEEeCCCCeeEEEcCCC
Q psy10953 111 VRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG--EDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 111 i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
|++||+.++.....+.....+.+++|+|+++.+++++ .|+.|++|++.+++.+....+.
T Consensus 303 I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH 363 (420)
T 4gga_A 303 IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH 363 (420)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred EEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC
Confidence 9999999999888888888899999999999988765 6899999999999888766653
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=8e-24 Score=164.48 Aligned_cols=159 Identities=9% Similarity=0.101 Sum_probs=115.1
Q ss_pred eccCeeeEEEEEEcC--------CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcE
Q psy10953 7 INVGPVDMWNVVFSP--------DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGII 77 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~--------~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v 77 (181)
+..+...|.+++|+| ||++|++++.|++|++||+++++....+..+...+.+++|+|++. +|++++.|+.|
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 456778899999998 899999999999999999988776655555566678999999874 79999999999
Q ss_pred EEEeCCCC---------------------------------CcccEEEEEEc-CCCCEEEEEeCCCcEEEEecCCCceee
Q psy10953 78 NIFDANTG---------------------------------HSSWVLSTAFT-RDGKFFISASADHTVRVWNFARRENMH 123 (181)
Q Consensus 78 ~i~d~~~~---------------------------------~~~~v~~~~~s-~~~~~l~~~~~d~~i~v~d~~~~~~~~ 123 (181)
++||++++ |...+..+.|+ |+++.+++++.|+.+++||+..+....
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 99998642 33445667776 799999999999999999997655433
Q ss_pred eee-cCCcEE------------------EEEEcc--CCCEEEEEcCCCcEEEEeCCCCeeEEE
Q psy10953 124 TFK-HADQVW------------------CVCVAP--DGDKFVSVGEDKAVHMYSYKPEEEVEV 165 (181)
Q Consensus 124 ~~~-~~~~v~------------------~~~~sp--~g~~l~~~~~d~~v~i~~~~~~~~~~~ 165 (181)
.+. +...++ ..+++| ++.++++++.|+.|++|+..+++.+..
T Consensus 292 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 292 EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp ------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEE
T ss_pred eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 322 222222 233443 334567788899999999988765543
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.91 E-value=2.3e-22 Score=154.31 Aligned_cols=145 Identities=14% Similarity=0.167 Sum_probs=116.6
Q ss_pred EEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC----------------------------
Q psy10953 15 WNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG---------------------------- 65 (181)
Q Consensus 15 ~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~---------------------------- 65 (181)
..+++.++++.+ ++++.|++|++||..+++.+..+..+. .+.++.++++.
T Consensus 62 ~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~ 140 (355)
T 3vu4_A 62 SKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDA-PVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFG 140 (355)
T ss_dssp CEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSS-CEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEE
T ss_pred EEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCC-ceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCC
Confidence 344455555554 345567799999999998887776443 45567776542
Q ss_pred -------CEEEE--eeCCCcEEEEeCCC------------------------CCcccEEEEEEcCCCCEEEEEeCCCc-E
Q psy10953 66 -------HWIAS--GALDGIINIFDANT------------------------GHSSWVLSTAFTRDGKFFISASADHT-V 111 (181)
Q Consensus 66 -------~~l~~--~~~d~~v~i~d~~~------------------------~~~~~v~~~~~s~~~~~l~~~~~d~~-i 111 (181)
..+++ |+.||.|++||+.+ +|...|.+++|+|+|++|++++.|++ |
T Consensus 141 ~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 141 GVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred ceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 23444 57899999999864 36678999999999999999999998 9
Q ss_pred EEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 112 RVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 112 ~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
++||+++++.+..+. |...|++++|+|+|++|++++.|+.|++|++..+
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 999999999888886 8889999999999999999999999999999654
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.91 E-value=3.1e-22 Score=161.86 Aligned_cols=161 Identities=14% Similarity=0.216 Sum_probs=140.8
Q ss_pred eeeccCeeeEEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-EEEEeeCCCcEEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVLSGSQS----GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-WIASGALDGIINI 79 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~d~~v~i 79 (181)
..+..+...+.+++|+|+|++|++++.+ +.|++|| .++....+..+...+.+++|+|+++ .+++++.|+.+++
T Consensus 110 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~v 187 (615)
T 1pgu_A 110 SEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVF 187 (615)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEE
T ss_pred chhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 3455566778999999999999999987 6888888 5677777777888888999999998 7999999999999
Q ss_pred EeCCC--------CCcc---cEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeee-----ecCCcEEEEEEccCCCE
Q psy10953 80 FDANT--------GHSS---WVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTF-----KHADQVWCVCVAPDGDK 142 (181)
Q Consensus 80 ~d~~~--------~~~~---~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~-----~~~~~v~~~~~sp~g~~ 142 (181)
||+.+ +|.. .|.+++|+|+ ++++++++.|+.|++||+.+++.+..+ .|...|.+++|+ ++++
T Consensus 188 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 266 (615)
T 1pgu_A 188 YQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQK 266 (615)
T ss_dssp EETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSE
T ss_pred EeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCE
Confidence 99864 4666 8999999999 999999999999999999999888887 678899999999 9999
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEcCC
Q psy10953 143 FVSVGEDKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~~~~~~~~~~ 168 (181)
+++++.|+.|++|++.+++.+.....
T Consensus 267 l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 267 FATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 99999999999999998877654443
No 113
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=3.4e-22 Score=157.46 Aligned_cols=154 Identities=20% Similarity=0.303 Sum_probs=134.6
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
+..+...+.+ ++++++++++++.|++|++||+++++....+..+...+.+++|+|+++++++++.|+.+++||+.+
T Consensus 266 ~~~~~~~v~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 266 LRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ECCCSSCEEE--EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccceEEE--EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 3344444444 478999999999999999999999999888888888888999999999999999999999999974
Q ss_pred ------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 85 ------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 85 ------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+|...|.+++|+ ++++++++.|+.|++||+.+........+...+..++|+|+++++++++ |+.|++|++.
T Consensus 344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 477789999987 5899999999999999999988777777777888899999999999998 8999999999
Q ss_pred CCeeEEE
Q psy10953 159 PEEEVEV 165 (181)
Q Consensus 159 ~~~~~~~ 165 (181)
+++.+..
T Consensus 421 ~g~~~~~ 427 (464)
T 3v7d_B 421 SGKLVHA 427 (464)
T ss_dssp TCCEEES
T ss_pred CCcEEeh
Confidence 9888763
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=4.6e-21 Score=147.68 Aligned_cols=154 Identities=19% Similarity=0.280 Sum_probs=129.4
Q ss_pred eEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCC-----
Q psy10953 13 DMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANTG----- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~----- 85 (181)
.+.+++|+|+|+++ ++++.|++|++||+.+++....+..+. .+.+++|+|++++|++ +..++.|++||+.++
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT 111 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEE
Confidence 47899999999987 677789999999999999988877655 5679999999998765 556799999999764
Q ss_pred --CcccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEE-EEEcCCCcEEEEeCCCCe
Q psy10953 86 --HSSWVLSTAFTRDGKFF-ISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKF-VSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~~~~~d~~v~i~~~~~~~ 161 (181)
+...+..++|+|+++.+ ++++.++.|++||+.+++.+..+.....+.+++|+|+++.+ ++++.++.|++|++.+++
T Consensus 112 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 112 VKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 23457899999999976 68888999999999999888887766778999999999987 567788999999998887
Q ss_pred eEEEcC
Q psy10953 162 EVEVNG 167 (181)
Q Consensus 162 ~~~~~~ 167 (181)
.+....
T Consensus 192 ~~~~~~ 197 (391)
T 1l0q_A 192 VIDTVK 197 (391)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 665443
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=6.4e-21 Score=146.89 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=131.2
Q ss_pred eeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEE-EEeeCCCcEEEEeCCCC----
Q psy10953 12 VDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWI-ASGALDGIINIFDANTG---- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l-~~~~~d~~v~i~d~~~~---- 85 (181)
..+.+++|+|+|+++ ++++.|+.|++||+.+++....+..+.. +..++|+|+++.+ ++++.++.+++||+.++
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS-PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 357899999999987 6888899999999999998887766544 4689999999887 56778999999999764
Q ss_pred ---CcccEEEEEEcCCCCEEEEEe---CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEE-EEEcCCCcEEEEeCC
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISAS---ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKF-VSVGEDKAVHMYSYK 158 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~~~~~d~~v~i~~~~ 158 (181)
+...+..++|+|+++++++++ .++.|++||+.+++.+..+.....+.+++|+|+|+++ ++++.|+.|++|++.
T Consensus 195 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 195 TVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 334678899999999888887 6899999999998888887766678999999999987 566789999999999
Q ss_pred CCeeEEEcCC
Q psy10953 159 PEEEVEVNGG 168 (181)
Q Consensus 159 ~~~~~~~~~~ 168 (181)
+++.+.....
T Consensus 275 ~~~~~~~~~~ 284 (391)
T 1l0q_A 275 TNTITATMAV 284 (391)
T ss_dssp TTEEEEEEEC
T ss_pred CCcEEEEEEC
Confidence 8877655443
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=4.9e-21 Score=150.22 Aligned_cols=158 Identities=21% Similarity=0.384 Sum_probs=136.0
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+..+...+.+++| +++++++|+.|++|++||+.+++....+..+...+.+++|+ +..+++++.|+.+++||+
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~ 240 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDM 240 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEEC
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeC
Confidence 34556667777888888 88999999999999999999999998888888888888886 458999999999999998
Q ss_pred CC-----------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCC
Q psy10953 83 NT-----------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 83 ~~-----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
.+ +|...|.+++| +++++++++.|+.|++||+.+++.+..+. |...+.++++ +++++++++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg 316 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN 316 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 64 35567888888 78899999999999999999998888776 7788998888 578999999999
Q ss_pred cEEEEeCCCCeeEEEcCC
Q psy10953 151 AVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 151 ~v~i~~~~~~~~~~~~~~ 168 (181)
.|++|++.++..+....+
T Consensus 317 ~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEG 334 (435)
T ss_dssp CEEEEETTTCCEEEEECC
T ss_pred eEEEEECCCCCEEEEEeC
Confidence 999999998887766554
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=8.4e-23 Score=158.73 Aligned_cols=148 Identities=14% Similarity=0.095 Sum_probs=114.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEE-----EecCCceEEEEEECC--------CCCEEEEeeCCCcEEEEeCC
Q psy10953 17 VVFSPDDKYVLSGSQSGKINLYGVETGKLEQI-----FDTRGKFTLSIAYST--------DGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~s~--------d~~~l~~~~~d~~v~i~d~~ 83 (181)
..+++++++|++++.|++|++||+++++.... +..|...+.+++|+| |+++|++++.|++|++||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 44556778899999999999999998865432 345677889999997 88999999999999999986
Q ss_pred C--------CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeee--------------------------ecC
Q psy10953 84 T--------GHSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTF--------------------------KHA 128 (181)
Q Consensus 84 ~--------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~--------------------------~~~ 128 (181)
+ +|...+.+++|+|++. +|++++.|+.|++||+++++..... .|.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 4 3667899999999874 8999999999999999875432211 244
Q ss_pred CcEEEEEEc-cCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 129 DQVWCVCVA-PDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 129 ~~v~~~~~s-p~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
..+.+++|+ |+|+.+++++.|+.+++|++..+....
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 567788876 899999999999999999997765443
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=3.6e-21 Score=143.95 Aligned_cols=143 Identities=22% Similarity=0.393 Sum_probs=119.2
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------ 85 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------ 85 (181)
+..|+||+++ +|++| .|++|++||+.+++.++.+.. +...+.+++|+|++++|++|+.|+.|++||+.++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 3568999886 67666 499999999999999887764 4556889999999999999999999999999764
Q ss_pred --CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce-eeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 86 --HSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN-MHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
|...+.+ ++++++.+++++.++.+++|+...... +..+ .|...+..++++++++++++++.|+.|++|++.++
T Consensus 106 ~~h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 106 TSHSARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ECCSSCEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred cCccceEEE--eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 4444544 566778999999999999999877543 3333 37788999999999999999999999999999765
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=2.2e-21 Score=148.79 Aligned_cols=143 Identities=13% Similarity=0.212 Sum_probs=113.3
Q ss_pred EEEEcCCCCEEEE--EeCCCcEEEEeCCCCc----------------EEEEEecCCceEEEEEECCCCCEEEEeeCCCc-
Q psy10953 16 NVVFSPDDKYVLS--GSQSGKINLYGVETGK----------------LEQIFDTRGKFTLSIAYSTDGHWIASGALDGI- 76 (181)
Q Consensus 16 ~~~~s~~g~~l~~--~~~d~~i~~~d~~~~~----------------~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~- 76 (181)
.+++++ +++++ |+.||+|++||+.+++ ....+..|...+.+++|+|+|++|++++.|++
T Consensus 142 ~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 142 VCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred eEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 455666 55655 5889999999998765 14566677888899999999999999999998
Q ss_pred EEEEeCCC---------C-CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee--------------------eee
Q psy10953 77 INIFDANT---------G-HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH--------------------TFK 126 (181)
Q Consensus 77 v~i~d~~~---------~-~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~--------------------~~~ 126 (181)
|++||+++ + |...|.+++|+|+|++|++++.|+.|++||+....... .+.
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence 99999874 3 77789999999999999999999999999997542110 010
Q ss_pred ----cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 127 ----HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 127 ----~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.......++|+|+|+.+++++.|+.+++|++..+
T Consensus 300 ~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 300 LSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred eccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 0112356899999999999999999999998543
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.88 E-value=1.8e-20 Score=147.14 Aligned_cols=158 Identities=21% Similarity=0.404 Sum_probs=134.3
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+..+..+...+++++|+ ++++++|+.|++|++||+.+++....+..+...+.++.++ ++.+++++.|+.+++||+
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 226 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEES
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEEC
Confidence 345566677788999997 6799999999999999999999888888787778788884 677999999999999998
Q ss_pred CC--------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 83 NT--------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 83 ~~--------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
.+ +|...+.+++| +++++++++.|+.|++||+.+++.+..+. |...+.++++ +++++++++.|+.|+
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 302 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEE
Confidence 75 35677888888 78899999999999999999888887776 7788999988 888999999999999
Q ss_pred EEeCCCCeeEEEcCC
Q psy10953 154 MYSYKPEEEVEVNGG 168 (181)
Q Consensus 154 i~~~~~~~~~~~~~~ 168 (181)
+|++.+++.+....+
T Consensus 303 i~d~~~~~~~~~~~~ 317 (445)
T 2ovr_B 303 VWDVETGNCIHTLTG 317 (445)
T ss_dssp EEETTTCCEEEEECC
T ss_pred EEECCCCCEEEEEcC
Confidence 999988877765544
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=1.6e-20 Score=147.32 Aligned_cols=151 Identities=23% Similarity=0.424 Sum_probs=126.8
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----- 84 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----- 84 (181)
+...+.++++ +++++++|+.|++|++||+.+++....+..|...+.+++| +++.|++|+.||.|++||+.+
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 3344666655 8999999999999999999999999888888888878887 789999999999999999875
Q ss_pred ---CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCcee---eee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 85 ---GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENM---HTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 85 ---~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+|...|.+++|++ ..+++++.|+.|++||+.++... ... .|...|.++++ +++++++++.|+.|++|++
T Consensus 208 ~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp EECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred EEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 3667889998864 59999999999999999887654 223 37788999988 7889999999999999999
Q ss_pred CCCeeEEEcCC
Q psy10953 158 KPEEEVEVNGG 168 (181)
Q Consensus 158 ~~~~~~~~~~~ 168 (181)
.+++.+....+
T Consensus 284 ~~~~~~~~~~~ 294 (435)
T 1p22_A 284 STCEFVRTLNG 294 (435)
T ss_dssp TTCCEEEEEEC
T ss_pred CcCcEEEEEcC
Confidence 98877655443
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=1.8e-20 Score=146.70 Aligned_cols=162 Identities=15% Similarity=0.133 Sum_probs=126.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEE-EeeCCC--cE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSG---KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIA-SGALDG--II 77 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~-~~~~d~--~v 77 (181)
+..+..+...+.+++|||||++|++++.++ .|++||+.+++...+. .+...+.+++|+|||++|+ +++.++ .+
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee-cCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 344555566789999999999999999875 9999999999876544 3445567899999999888 555555 49
Q ss_pred EEEeCCCC-------CcccEEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc
Q psy10953 78 NIFDANTG-------HSSWVLSTAFTRDGKFFISASA-DH--TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 78 ~i~d~~~~-------~~~~v~~~~~s~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
++||+.++ +...+..++|+|+|++|++++. ++ .|++||+.+++......+...+.+++|+|+|++|+.++
T Consensus 250 ~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 250 YVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp EEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEE
Confidence 99998753 4556889999999998888776 44 68888988776443334566788999999999998888
Q ss_pred CC---CcEEEEeCCCCeeEEEc
Q psy10953 148 ED---KAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 148 ~d---~~v~i~~~~~~~~~~~~ 166 (181)
.+ ..|++|++.+++...+.
T Consensus 330 ~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp ECSSCEEEEEEETTTCCEEECC
T ss_pred CcCCceEEEEEECCCCCEEEec
Confidence 64 58999999887665443
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.88 E-value=1.4e-20 Score=147.85 Aligned_cols=151 Identities=22% Similarity=0.389 Sum_probs=129.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
+..+..+...+.+++| +++++++++.|++|++||+++++....+..+...+.++.+ +++++++++.|+.+++||+.
T Consensus 272 ~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 272 LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETT
T ss_pred eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECC
Confidence 4555666777888888 8899999999999999999999988888777776666665 57899999999999999986
Q ss_pred CC-----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee------ecCCcEEEEEEccCCCEEEEE
Q psy10953 84 TG-----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF------KHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 84 ~~-----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~------~~~~~v~~~~~sp~g~~l~~~ 146 (181)
++ |...|.+++|+ ++++++++.|+.|++||+.+++.+..+ .+...|++++|+|++.+++++
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~ 425 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 425 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEc
Confidence 42 56678888885 689999999999999999999887776 366789999999999999999
Q ss_pred cCCCc----EEEEeCCCC
Q psy10953 147 GEDKA----VHMYSYKPE 160 (181)
Q Consensus 147 ~~d~~----v~i~~~~~~ 160 (181)
+.||. +.+||+...
T Consensus 426 ~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 426 SRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CSSSSSCCEEEEEECCCC
T ss_pred ccCCCCccEEEEEECCCC
Confidence 99997 999999754
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=5.7e-21 Score=145.05 Aligned_cols=158 Identities=11% Similarity=0.057 Sum_probs=114.1
Q ss_pred CeeeEEEEEEcCC----CCEEEEEeC--------------------CCcEEEEeC-CCCcEEEEEecCCceEEEEEECC-
Q psy10953 10 GPVDMWNVVFSPD----DKYVLSGSQ--------------------SGKINLYGV-ETGKLEQIFDTRGKFTLSIAYST- 63 (181)
Q Consensus 10 ~~~~~~~~~~s~~----g~~l~~~~~--------------------d~~i~~~d~-~~~~~~~~~~~~~~~~~~~~~s~- 63 (181)
+-..++.++|+|| ++++++++. |+.|++|++ .+++.+..+..++..+..++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 3446788888999 888877653 778888888 45776666556665556677777
Q ss_pred --CCCEEEEeeCCCcEEEEeCCCCCc-----------ccEEEEEEcCCCCEE------------EEEeCCCcEEEEecCC
Q psy10953 64 --DGHWIASGALDGIINIFDANTGHS-----------SWVLSTAFTRDGKFF------------ISASADHTVRVWNFAR 118 (181)
Q Consensus 64 --d~~~l~~~~~d~~v~i~d~~~~~~-----------~~v~~~~~s~~~~~l------------~~~~~d~~i~v~d~~~ 118 (181)
++..|++++.|++|++||++++.. ..+.+++|+|+|+++ ++++.|++|++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 678899999999999999987531 245677899999976 5677899999999999
Q ss_pred Cceeeeee------cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEcCCC
Q psy10953 119 RENMHTFK------HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 119 ~~~~~~~~------~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
++.+..+. |...+.+. +.++..+++++.|++|+|||+.+++.+..+.++
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH 324 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPV 324 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred CEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCC
Confidence 88765441 33334333 334888999999999999999999888776543
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=2e-20 Score=145.86 Aligned_cols=158 Identities=13% Similarity=0.156 Sum_probs=133.6
Q ss_pred cCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCC--
Q psy10953 9 VGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANTG-- 85 (181)
Q Consensus 9 ~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~-- 85 (181)
.+...+.+++|+|+++++++++.|+.|++||+++++....+..+...+.+++|+|+++.+++ +..|+.+++||+.++
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 34457899999999999999999999999999999988888777777889999999998855 557999999998754
Q ss_pred -----CcccEEEEEEcCCCCEEEEEe--------CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEE-EEEcCCCc
Q psy10953 86 -----HSSWVLSTAFTRDGKFFISAS--------ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKF-VSVGEDKA 151 (181)
Q Consensus 86 -----~~~~v~~~~~s~~~~~l~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~~~~~d~~ 151 (181)
....+..++|+|+|+.+++++ .|+.|++||+.+++......+...+.+++|+|+++.+ ++++.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 247 IRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK 326 (433)
T ss_dssp EEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE
T ss_pred EEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE
Confidence 234578999999999888888 4889999999998887777777789999999999865 55688999
Q ss_pred EEEEeCCCCeeEEEc
Q psy10953 152 VHMYSYKPEEEVEVN 166 (181)
Q Consensus 152 v~i~~~~~~~~~~~~ 166 (181)
|++|++.+++.+...
T Consensus 327 v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 327 IEVYDLKEKKVQKSI 341 (433)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 999999887665543
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=6.3e-20 Score=143.10 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=134.4
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee--------CC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA--------LD 74 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~--------~d 74 (181)
+..+..+...+.+++|+|++++++ +++.|++|++||+++++....+..+.. +.+++|+|+++.+++++ .|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL-PRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE-EEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC-ceEEEEcCCCCEEEEEECCCCccccCC
Confidence 344445566688999999999885 455799999999999988877765544 66899999999998887 48
Q ss_pred CcEEEEeCCCCC-------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEE
Q psy10953 75 GIINIFDANTGH-------SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 75 ~~v~i~d~~~~~-------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~ 146 (181)
+.+++||+.++. ...+..++|+|+++ ++++++.++.|++||+.+++....+.+...+.+++|+|+|++++++
T Consensus 283 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEE
T ss_pred CeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEE
Confidence 899999997652 34677899999997 5566788999999999998888888888889999999999998888
Q ss_pred cC---------------CCcEEEEeCCCCeeEEEcCC
Q psy10953 147 GE---------------DKAVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 147 ~~---------------d~~v~i~~~~~~~~~~~~~~ 168 (181)
+. |+.|++|+..+++.+....+
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC
T ss_pred ecCCCccccccccccccceEEEEEECCCCcEEEEecC
Confidence 76 46999999998877665444
No 127
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=3.4e-21 Score=148.42 Aligned_cols=149 Identities=12% Similarity=0.162 Sum_probs=111.2
Q ss_pred eeEEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCcEE--------E--EEecCCceEEEEEECCCCCEEEEe---
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSG-------KINLYGVETGKLE--------Q--IFDTRGKFTLSIAYSTDGHWIASG--- 71 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~-------~i~~~d~~~~~~~--------~--~~~~~~~~~~~~~~s~d~~~l~~~--- 71 (181)
.++++++|+|||++|++|+.+. +|++|++..+... . .+..+...+.+++ +++..+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~--~~~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAID--ASKGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEE--EETTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEE--eCCCEEEEEECC
Confidence 3589999999999999998654 4999998755321 1 2223444444444 456666655
Q ss_pred --------eCCCcEEEEeCCCC-----------------CcccEEEEEEcCCCCEEEEE--eCCCcEEEEecCCCceeee
Q psy10953 72 --------ALDGIINIFDANTG-----------------HSSWVLSTAFTRDGKFFISA--SADHTVRVWNFARRENMHT 124 (181)
Q Consensus 72 --------~~d~~v~i~d~~~~-----------------~~~~v~~~~~s~~~~~l~~~--~~d~~i~v~d~~~~~~~~~ 124 (181)
+.|+.+++|++... +..++..++|||||++++++ +.|+.|++||+.+++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 35778999986431 23457889999999987654 4689999999999998888
Q ss_pred eecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 125 FKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 125 ~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
+.|...|++++|+|||+++++++.+ .+.+|+..++..+
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCI 210 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEE
T ss_pred eCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcce
Confidence 8888899999999999999998854 5666666665544
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=2.5e-21 Score=152.54 Aligned_cols=144 Identities=18% Similarity=0.227 Sum_probs=117.2
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----------cEE-----EEEecCCceEEEEEECCCCCEEE----Eee
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETG-----------KLE-----QIFDTRGKFTLSIAYSTDGHWIA----SGA 72 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~-----------~~~-----~~~~~~~~~~~~~~~s~d~~~l~----~~~ 72 (181)
.+..+++++++.++++++.++ +++|+.... ... ..+ .....+.+++|+|+|++|+ +++
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccC
Confidence 467899999999999999887 888865311 111 011 1233477999999999999 788
Q ss_pred CCCcEEEEeCCC-------------------CCcccEEEEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeee-ecCCcE
Q psy10953 73 LDGIINIFDANT-------------------GHSSWVLSTAFTRD-GKFFISASADHTVRVWNFARRENMHTF-KHADQV 131 (181)
Q Consensus 73 ~d~~v~i~d~~~-------------------~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v 131 (181)
.|+.|++||+.+ +|...|.+++|+|+ +++|++++.|++|++||++++...... .|...+
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v 195 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAV 195 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCce
Confidence 999999998632 25678999999998 789999999999999999987655433 467789
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 132 WCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
.+++|+|+|++|++++.|+.|++|+..
T Consensus 196 ~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 196 TSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999999999999999999999998
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1e-20 Score=149.06 Aligned_cols=147 Identities=15% Similarity=0.145 Sum_probs=117.1
Q ss_pred eEEEEEEcCCCCEEE----EEeCCCcEEEEeCCCC--------cE---EEEEecCCceEEEEEECCC-CCEEEEeeCCCc
Q psy10953 13 DMWNVVFSPDDKYVL----SGSQSGKINLYGVETG--------KL---EQIFDTRGKFTLSIAYSTD-GHWIASGALDGI 76 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~----~~~~d~~i~~~d~~~~--------~~---~~~~~~~~~~~~~~~~s~d-~~~l~~~~~d~~ 76 (181)
.+.+++|+|+|++|+ +++.|++|++||++++ +. ...+..|...+.+++|+|+ +.+|++++.|+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 489999999999999 7889999999998754 21 2334446677889999998 789999999999
Q ss_pred EEEEeCCCC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-c-------CCcEEEEEEccCC
Q psy10953 77 INIFDANTG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-H-------ADQVWCVCVAPDG 140 (181)
Q Consensus 77 v~i~d~~~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~-------~~~v~~~~~sp~g 140 (181)
|++||++++ |...|.+++|+|+|++|++++.|+.|++||.+ ++....+. + ...+.+++|++++
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCc
Confidence 999999753 55679999999999999999999999999998 33333332 1 2278999999998
Q ss_pred CEEEEEc-CCC------cEEEEeCCCC
Q psy10953 141 DKFVSVG-EDK------AVHMYSYKPE 160 (181)
Q Consensus 141 ~~l~~~~-~d~------~v~i~~~~~~ 160 (181)
.++++.+ .++ .+++|++...
T Consensus 253 ~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 253 VFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred eEEEEEccCCCccCCCCceEEEEeccC
Confidence 8876544 332 3899998653
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=2.9e-19 Score=139.86 Aligned_cols=160 Identities=16% Similarity=0.186 Sum_probs=121.5
Q ss_pred eeeccCeeeEEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC--cEE
Q psy10953 5 SKINVGPVDMWNVVFSPDDKYVL-SGSQSGK--INLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG--IIN 78 (181)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~g~~l~-~~~~d~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~--~v~ 78 (181)
..+..++..+.+++|+|||++|+ +++.++. |++||+.+++...+ ..+...+.+++|+|||++|++++. ++ .++
T Consensus 216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC-CCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC-cCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 34455556688999999999887 6666654 99999998887543 344555678999999999988775 44 677
Q ss_pred EEeCCCC-------CcccEEEEEEcCCCCEEEEEeCC---CcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 79 IFDANTG-------HSSWVLSTAFTRDGKFFISASAD---HTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 79 i~d~~~~-------~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+||+.++ +...+..++|+|+|++|++++.+ ..|++||+.+++......+ ..+.+++|+|+|+.|+.++.
T Consensus 295 ~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 295 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-FLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp EEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS-SSCEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC-CCcCCeEEcCCCCEEEEEEc
Confidence 7888643 33567889999999999888764 5899999998775433233 37899999999999998887
Q ss_pred CC---cEEEEeCCCCeeEEEc
Q psy10953 149 DK---AVHMYSYKPEEEVEVN 166 (181)
Q Consensus 149 d~---~v~i~~~~~~~~~~~~ 166 (181)
++ .|++|++..+....+.
T Consensus 374 ~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp ETTEEEEEEEETTSCCEEECC
T ss_pred CCCccEEEEEECCCCcEEEee
Confidence 66 7999998755444443
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=7.1e-19 Score=145.91 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=110.4
Q ss_pred eeeEEEEEEcCCCCEEEEEeC-CC-----cEEEEeCCCCcEEEEEecCCc------------------------eEEEEE
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQ-SG-----KINLYGVETGKLEQIFDTRGK------------------------FTLSIA 60 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~-d~-----~i~~~d~~~~~~~~~~~~~~~------------------------~~~~~~ 60 (181)
...+.+++|||||++|++++. |+ +|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 445789999999999999998 88 899999999988777654322 245789
Q ss_pred ECCCCCEEEEeeCCCcEEEEeCCCC---C-------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec-CC
Q psy10953 61 YSTDGHWIASGALDGIINIFDANTG---H-------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH-AD 129 (181)
Q Consensus 61 ~s~d~~~l~~~~~d~~v~i~d~~~~---~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~ 129 (181)
|||||++|++++. +.+++||+.++ . ...+..++|||||++|++++ ++.|++||+.+++....... ..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999998886 89999998765 2 34688999999999999888 46899999988765443322 21
Q ss_pred c----------------EEEEEEccCCCEEEEEcCCC
Q psy10953 130 Q----------------VWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 130 ~----------------v~~~~~sp~g~~l~~~~~d~ 150 (181)
. +.+++|||||++|+.++.|+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 1 46799999999999987654
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=1.4e-17 Score=134.56 Aligned_cols=162 Identities=14% Similarity=0.180 Sum_probs=127.1
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCcEEEEEecCCceEEEEEECC----CCCEEEEeeC-CCc
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGV--ETGKLEQIFDTRGKFTLSIAYST----DGHWIASGAL-DGI 76 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~--~~~~~~~~~~~~~~~~~~~~~s~----d~~~l~~~~~-d~~ 76 (181)
+..+..+.. ++.++|+|||++|++++.|++|++||+ .+++.+..+.. +.....++|+| ||+++++++. ++.
T Consensus 172 ~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~ 249 (543)
T 1nir_A 172 VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQ 249 (543)
T ss_dssp EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCe
Confidence 344443333 789999999999999999999999999 88888777764 44457899999 9999998874 899
Q ss_pred EEEEeCCCCC-------------------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceee--eeecCCcEEEE
Q psy10953 77 INIFDANTGH-------------------SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMH--TFKHADQVWCV 134 (181)
Q Consensus 77 v~i~d~~~~~-------------------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~v~~~ 134 (181)
|.+||..+.. ...+..+.++|++. ++++...++.|.+||+.+.+.+. .+.+...+.++
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 9999986532 12577899999776 56677778999999998765443 44556668899
Q ss_pred EEccCCCEEEEEc-CCCcEEEEeCCCCeeEEEcC
Q psy10953 135 CVAPDGDKFVSVG-EDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 135 ~~sp~g~~l~~~~-~d~~v~i~~~~~~~~~~~~~ 167 (181)
+|+|+|+++++++ .++.|.+||..+++.+....
T Consensus 330 ~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 330 GWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred eECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 9999999876555 58899999999987665433
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=9.4e-18 Score=123.45 Aligned_cols=152 Identities=16% Similarity=0.155 Sum_probs=113.9
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CcEEEEEecC-CceEEEEEECCCCCEEEEeeC--CC--cEEE
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET-GKLEQIFDTR-GKFTLSIAYSTDGHWIASGAL--DG--IINI 79 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~--d~--~v~i 79 (181)
.+..+...+.+++|+|+|++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|++++|++++. ++ .+..
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 3344555688999999999999887 78999999998 8877665444 244567899999999999883 33 4555
Q ss_pred EeCCCC------CcccEEEEEEcCCCCEEE-EEeCCCcEEEEecC--CCceeeeeecCCcEEEEEEccCCCEEEEEc-CC
Q psy10953 80 FDANTG------HSSWVLSTAFTRDGKFFI-SASADHTVRVWNFA--RRENMHTFKHADQVWCVCVAPDGDKFVSVG-ED 149 (181)
Q Consensus 80 ~d~~~~------~~~~v~~~~~s~~~~~l~-~~~~d~~i~v~d~~--~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d 149 (181)
+++..+ ....+..++|+|++++++ ++..++.+++|++. ++.......+...+.+++|+|+|+.++.++ .+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 194 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT 194 (297)
T ss_dssp EETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTT
T ss_pred EECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCC
Confidence 555432 223478889999999776 77788989999853 344333334667899999999999887766 48
Q ss_pred CcEEEEeCC
Q psy10953 150 KAVHMYSYK 158 (181)
Q Consensus 150 ~~v~i~~~~ 158 (181)
+.+++|.+.
T Consensus 195 ~~~~i~~~~ 203 (297)
T 2ojh_A 195 GQMQIWRVR 203 (297)
T ss_dssp SSCEEEEEE
T ss_pred CCccEEEEC
Confidence 889999875
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=1.8e-17 Score=124.58 Aligned_cols=149 Identities=18% Similarity=0.258 Sum_probs=120.1
Q ss_pred eEEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEE
Q psy10953 13 DMWNVVFSPDDKYVLSGS------------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIF 80 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~ 80 (181)
.+..++|+|+|+++++++ .++.|.+||+.+++....+.... .+..+.|+|||++|+++ ++.+++|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-QITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-SCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-CcceeEECCCCCEEEEe--CCeEEEE
Confidence 356789999999998886 57999999999988877766533 34578899999988877 5789999
Q ss_pred eCCCCC--------c-----------------------------------------------------------------
Q psy10953 81 DANTGH--------S----------------------------------------------------------------- 87 (181)
Q Consensus 81 d~~~~~--------~----------------------------------------------------------------- 87 (181)
|+.++. .
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 875320 0
Q ss_pred -ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 88 -SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 88 -~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
..+..++|+|+|++++++ ++.|++||+.+++.+..+.....+.+++|+|+|+++++++.++.|++|++.+++.+...
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 012358999999988877 68999999999888777776667889999999999999888999999999988776544
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.78 E-value=5.9e-17 Score=122.73 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=122.2
Q ss_pred eEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-----
Q psy10953 13 DMWNVVFSPDDKYVLSGS--QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG----- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~----- 85 (181)
...+++|+|+|+++++++ .++.|.+||..+++....+...+....++.|+|+|+++++++.++.+.+||+.++
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 368899999999887766 4788999999999988877644444557899999999999999999999998653
Q ss_pred -------CcccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc-CCCcEEEEe
Q psy10953 86 -------HSSWVLSTAFTRDGKFFISASA-DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG-EDKAVHMYS 156 (181)
Q Consensus 86 -------~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~ 156 (181)
+...+..++|+|+|++++.++. ++.|++||+.+++.+..+..... .+++|+|+|+++++++ .++.|.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEE
Confidence 2335677999999997666654 58999999999887777664433 5799999999765555 689999999
Q ss_pred CCCCeeEEEc
Q psy10953 157 YKPEEEVEVN 166 (181)
Q Consensus 157 ~~~~~~~~~~ 166 (181)
..+++.+...
T Consensus 301 ~~~~~~~~~~ 310 (353)
T 3vgz_A 301 AKSYKVVKTF 310 (353)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 9888766543
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=2e-16 Score=119.16 Aligned_cols=156 Identities=9% Similarity=0.104 Sum_probs=114.4
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcE-EEEEecCCceEEEEEECCCCCEEEEeeCCC---cEEEE
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQ-SGKINLYGVETGKL-EQIFDTRGKFTLSIAYSTDGHWIASGALDG---IINIF 80 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~-d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~---~v~i~ 80 (181)
.+..+.... .++|+|+|+++++++. ++.|.+||..+++. ...+........+++|+|+|++++++..++ .+.+|
T Consensus 35 ~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 35 QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 334444445 9999999997766655 88999999999987 565555555443389999999998655553 89999
Q ss_pred eCCCCC-------cccEEEEEEcCCCCEE-EEEeCCCc-EEEEecCCCcee-----eeeecCCcEEEEEEccCCCEEEEE
Q psy10953 81 DANTGH-------SSWVLSTAFTRDGKFF-ISASADHT-VRVWNFARRENM-----HTFKHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 81 d~~~~~-------~~~v~~~~~s~~~~~l-~~~~~d~~-i~v~d~~~~~~~-----~~~~~~~~v~~~~~sp~g~~l~~~ 146 (181)
|+.++. ...+..++|+|+|+++ ++...++. +++|++.....+ ........+.+++|+|+|++++++
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 997642 2346789999999854 45556688 999998754322 222344568899999999976555
Q ss_pred c-CCCcEEEEeCCCCee
Q psy10953 147 G-EDKAVHMYSYKPEEE 162 (181)
Q Consensus 147 ~-~d~~v~i~~~~~~~~ 162 (181)
+ .++.|++|++.+++.
T Consensus 194 ~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 194 NLIGNSIGILETQNPEN 210 (331)
T ss_dssp ETTTTEEEEEECSSTTS
T ss_pred eCCCCeEEEEECCCCcc
Confidence 4 688999999987765
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=4.9e-17 Score=122.50 Aligned_cols=146 Identities=15% Similarity=0.237 Sum_probs=114.5
Q ss_pred EEEEcCCCCEEEEEeCCC---cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCCc-EEEEeCCCC-----
Q psy10953 16 NVVFSPDDKYVLSGSQSG---KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDGI-INIFDANTG----- 85 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~~-v~i~d~~~~----- 85 (181)
+++|+|+|++++++..++ .|.+||+.+++....+..... ..+++|+|||++++++ ..++. +.+|++...
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD-AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT-EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC-ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 399999999999655553 899999999998877765444 4689999999866554 55578 999997531
Q ss_pred -------CcccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCCce---eeeeecCCcEEEEEEccCCCEEEEEc-CCCcEE
Q psy10953 86 -------HSSWVLSTAFTRDGKFF-ISASADHTVRVWNFARREN---MHTFKHADQVWCVCVAPDGDKFVSVG-EDKAVH 153 (181)
Q Consensus 86 -------~~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~~~---~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~ 153 (181)
....+..++|+|+|+++ +++..++.|++||+.+++. +..+.....+..++|+|+|+++++++ .++.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~ 246 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVF 246 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEE
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEE
Confidence 12346789999999955 4555688999999998877 66777667788999999999877665 467899
Q ss_pred EEeCCCCee
Q psy10953 154 MYSYKPEEE 162 (181)
Q Consensus 154 i~~~~~~~~ 162 (181)
+|+..+++.
T Consensus 247 ~~d~~~~~~ 255 (331)
T 3u4y_A 247 NFNQLSGTL 255 (331)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCce
Confidence 999988765
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=1.5e-16 Score=119.78 Aligned_cols=146 Identities=15% Similarity=0.314 Sum_probs=109.4
Q ss_pred eEEEEEEcCCCCEEEEEe-CCCcEEEEeCCC-CcEEEE----Eec-CCceEEEEEECCCCCEEEEe-eCCCcEEEEeCCC
Q psy10953 13 DMWNVVFSPDDKYVLSGS-QSGKINLYGVET-GKLEQI----FDT-RGKFTLSIAYSTDGHWIASG-ALDGIINIFDANT 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~~-~~~~~~----~~~-~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~~ 84 (181)
.+.+++|+|+|+++++++ .++.|++||+.+ ++.... +.. .+..+..++|+|++++++++ ..++.+.+|++..
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 467899999999888777 899999999987 665432 222 33456689999999977655 4789999999843
Q ss_pred --CC----------------cccEEEEEEcCCCCEEE-EEeCCCcEEEEecCC----CceeeeeecCCcEEEEEEccCCC
Q psy10953 85 --GH----------------SSWVLSTAFTRDGKFFI-SASADHTVRVWNFAR----RENMHTFKHADQVWCVCVAPDGD 141 (181)
Q Consensus 85 --~~----------------~~~v~~~~~s~~~~~l~-~~~~d~~i~v~d~~~----~~~~~~~~~~~~v~~~~~sp~g~ 141 (181)
+. ...+..++|+|+|++++ +...++.|++||+.. .+.+..+.....+.+++|+|+|+
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 289 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGK 289 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSS
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCC
Confidence 11 12355799999998776 444789999999982 23444444444588999999999
Q ss_pred EEEEEc-CCCcEEEEeCC
Q psy10953 142 KFVSVG-EDKAVHMYSYK 158 (181)
Q Consensus 142 ~l~~~~-~d~~v~i~~~~ 158 (181)
++++++ .++.|.+|++.
T Consensus 290 ~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 290 YLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEECTTTCEEEEEEEE
T ss_pred EEEEecCCCCeEEEEEEc
Confidence 988888 57999999654
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=2.1e-18 Score=142.60 Aligned_cols=134 Identities=12% Similarity=0.182 Sum_probs=105.9
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc---eEEEEEECCCCCEEEEeeCC---------CcEEEEe
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK---FTLSIAYSTDGHWIASGALD---------GIINIFD 81 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~s~d~~~l~~~~~d---------~~v~i~d 81 (181)
..+++|+|||+++++ +.|++|++||+.+++....+..+.. .+.+++|||||++|++++.+ +.+++||
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 578899999997766 7899999999999988877765543 25689999999999998764 7888999
Q ss_pred CCCCC----------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCC------------------cEE
Q psy10953 82 ANTGH----------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HAD------------------QVW 132 (181)
Q Consensus 82 ~~~~~----------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~------------------~v~ 132 (181)
+.++. ...+..++|||||+.|+.++. +.|++||+.+++...... +.. .+.
T Consensus 98 ~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 98 IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred CCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 87543 223667899999999998886 799999998876554333 222 237
Q ss_pred EEEEccCCCEEEEEcCC
Q psy10953 133 CVCVAPDGDKFVSVGED 149 (181)
Q Consensus 133 ~~~~sp~g~~l~~~~~d 149 (181)
+++|||||+.|+.++.+
T Consensus 177 ~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EEEECTTSSEEEEEEEE
T ss_pred eEEECCCCCEEEEEEEC
Confidence 89999999999988754
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=2.9e-16 Score=118.85 Aligned_cols=152 Identities=8% Similarity=0.081 Sum_probs=120.5
Q ss_pred EEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCc---------eEEEEEECCCCCEEEEee--CCCcEEEEe
Q psy10953 14 MWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGK---------FTLSIAYSTDGHWIASGA--LDGIINIFD 81 (181)
Q Consensus 14 ~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~s~d~~~l~~~~--~d~~v~i~d 81 (181)
...++|+|+|++++ +...++.|.+||..+++....+..+.. ...++.|+|+|+++++++ .++.+.+||
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 56789999999665 455579999999999998877765431 146799999999877765 478899999
Q ss_pred CCCC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec-----CCcEEEEEEccCCCEEEEEcC
Q psy10953 82 ANTG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH-----ADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 82 ~~~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~v~~~~~sp~g~~l~~~~~ 148 (181)
+.++ +...+..++|+|+|+++++++.++.+.+||+.+++....+.. ...+.+++|+|+|+++++++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 171 GGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp TTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred CCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 8754 223366789999999999999999999999999887766642 335788999999998776665
Q ss_pred -CCcEEEEeCCCCeeEEE
Q psy10953 149 -DKAVHMYSYKPEEEVEV 165 (181)
Q Consensus 149 -d~~v~i~~~~~~~~~~~ 165 (181)
++.|.+|+..+++.+..
T Consensus 251 ~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp SSSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCcEEEE
Confidence 58999999988776543
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.75 E-value=1.1e-16 Score=120.48 Aligned_cols=147 Identities=14% Similarity=0.236 Sum_probs=110.2
Q ss_pred eeEEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCcEE--EEEecCCceEEEEEECCCCCEEEEeeC-CCcEEEEeCCCC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQS-GKINLYGVE--TGKLE--QIFDTRGKFTLSIAYSTDGHWIASGAL-DGIINIFDANTG 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d-~~i~~~d~~--~~~~~--~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~~ 85 (181)
..+..++|+|+|++|++++.+ +.|.+|++. +++.. ..+...+ .+..++|+|+++++++++. ++.+.+||+..+
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 346779999999999888876 999999997 66644 3333334 4558999999998876654 888999998311
Q ss_pred ----------CcccEEEEEEcCCCCEEEEEe-CCCcEEEEecCC-Cceee----ee--ecCCcEEEEEEccCCCEEEEEc
Q psy10953 86 ----------HSSWVLSTAFTRDGKFFISAS-ADHTVRVWNFAR-RENMH----TF--KHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 86 ----------~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~-~~~~~----~~--~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
....+..++|+|+|+++++++ .++.|++||+.+ ++... .. .....+.+++|+|+|+++++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 123466789999999877777 789999999987 54322 12 2334688999999999776554
Q ss_pred -CCCcEEEEeCCC
Q psy10953 148 -EDKAVHMYSYKP 159 (181)
Q Consensus 148 -~d~~v~i~~~~~ 159 (181)
.++.|.+|++..
T Consensus 197 ~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 197 ELNSSVDVWELKD 209 (343)
T ss_dssp TTTTEEEEEESSC
T ss_pred CCCCEEEEEEecC
Confidence 789999999954
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=4.2e-17 Score=135.30 Aligned_cols=153 Identities=12% Similarity=0.133 Sum_probs=117.3
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCce----------------EEEEEECCCCCE
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKF----------------TLSIAYSTDGHW 67 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----------------~~~~~~s~d~~~ 67 (181)
+..+..+...+..++|||||++|++++ ++.|++||+.+++...+....... +..+.|||||++
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~ 222 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA 222 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC
T ss_pred EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCE
Confidence 445555556689999999999999887 469999999988876654433221 246899999999
Q ss_pred EEEeeCCC---------------------------------cEEEEeCCC-C----------CcccEEEEEEcCCCCEEE
Q psy10953 68 IASGALDG---------------------------------IINIFDANT-G----------HSSWVLSTAFTRDGKFFI 103 (181)
Q Consensus 68 l~~~~~d~---------------------------------~v~i~d~~~-~----------~~~~v~~~~~s~~~~~l~ 103 (181)
|++++.|+ .+++||+.+ + +...+..++| |||++|+
T Consensus 223 l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~ 301 (741)
T 2ecf_A 223 IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLS 301 (741)
T ss_dssp EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEE
T ss_pred EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEE
Confidence 99987665 788899876 3 3456788999 9999888
Q ss_pred EEeC-----CCcEEEEecCCCceeeeeecCC-----cEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 104 SASA-----DHTVRVWNFARRENMHTFKHAD-----QVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 104 ~~~~-----d~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
+++. +..|++||+.+++....+.... .+..++|+|||+++++++.++.+++|.+.
T Consensus 302 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 302 FQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred EEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 7654 4679999999887665554222 34578999999988888889888888765
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=1.3e-16 Score=117.37 Aligned_cols=150 Identities=18% Similarity=0.288 Sum_probs=110.2
Q ss_pred eeEEEEEEcCCCCEEEEEe--CCCcEEEE--eCCCCcEEEEEecCCceEEEEEECCCCCEEE-EeeCCCcEEEEeC--CC
Q psy10953 12 VDMWNVVFSPDDKYVLSGS--QSGKINLY--GVETGKLEQIFDTRGKFTLSIAYSTDGHWIA-SGALDGIINIFDA--NT 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~--~d~~i~~~--d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~-~~~~d~~v~i~d~--~~ 84 (181)
..+.+++|+|||++|++++ .++..++| +..+++.. .+..... +..++|+||+++|+ ++..++.+.+|++ .+
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~ 162 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR-LMTKNLP-SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS 162 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE-ECCSSSS-EEEEEECTTSSEEEEEEEETTEEEEEEEETTT
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE-EeecCCC-ccceEECCCCCEEEEEECCCCceEEEEEECCC
Confidence 4467899999999999988 33445555 55555543 3333333 56789999999887 6778898899884 32
Q ss_pred -------CCcccEEEEEEcCCCCEEEEEe-CCCcEEEEecC-CCceeeeee-cCCcEEEEEEccCCCEEEEEcCC-----
Q psy10953 85 -------GHSSWVLSTAFTRDGKFFISAS-ADHTVRVWNFA-RRENMHTFK-HADQVWCVCVAPDGDKFVSVGED----- 149 (181)
Q Consensus 85 -------~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~-~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d----- 149 (181)
.+...+..++|+|+|++++.++ .++.+++|++. .......+. +...+..++|+|+|++|+.++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCc
Confidence 2345688999999999877666 58899999876 333444443 55678899999999999888865
Q ss_pred ------CcEEEEeCCCCeeE
Q psy10953 150 ------KAVHMYSYKPEEEV 163 (181)
Q Consensus 150 ------~~v~i~~~~~~~~~ 163 (181)
+.|++|++..++..
T Consensus 243 ~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp CCSSEEEEEEEEETTSCSCE
T ss_pred ccccCceEEEEEecCCCCce
Confidence 46999999877543
No 144
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=138.38 Aligned_cols=134 Identities=13% Similarity=0.196 Sum_probs=103.9
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc---eEEEEEECCCCCEEEEeeC---------CCcEEEEe
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK---FTLSIAYSTDGHWIASGAL---------DGIINIFD 81 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~s~d~~~l~~~~~---------d~~v~i~d 81 (181)
..+++|+|||+++++ +.|++|++||+.+++....+..+.. .+.+++|||||++|++++. ++.+++||
T Consensus 18 ~~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 18 TFFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 357899999965554 4699999999999998877765432 2568999999999998766 78999999
Q ss_pred CCCCCc-------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcE-----------------EEEE
Q psy10953 82 ANTGHS-------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQV-----------------WCVC 135 (181)
Q Consensus 82 ~~~~~~-------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v-----------------~~~~ 135 (181)
+.++.. ..+..++|||||+.|+.+. ++.|++||+.+++...... +...+ .+++
T Consensus 97 ~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 97 LSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 976543 3467899999999998886 7899999998776543221 22222 4799
Q ss_pred EccCCCEEEEEcCC
Q psy10953 136 VAPDGDKFVSVGED 149 (181)
Q Consensus 136 ~sp~g~~l~~~~~d 149 (181)
|||||++|+.++.|
T Consensus 176 wSPDG~~la~~~~d 189 (719)
T 1z68_A 176 WSPNGKFLAYAEFN 189 (719)
T ss_dssp ECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEEEC
Confidence 99999999998854
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=2.7e-17 Score=135.88 Aligned_cols=160 Identities=12% Similarity=0.133 Sum_probs=117.9
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CcEEEEEecCCce--------------EEEEEECCCCCE
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVET-----GKLEQIFDTRGKF--------------TLSIAYSTDGHW 67 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~-----~~~~~~~~~~~~~--------------~~~~~~s~d~~~ 67 (181)
+......+.+++|||||++|+++ .++.|++||+.+ ++..++....... +.++.|||||++
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~ 194 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC 194 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence 33344446778999999999985 689999999998 7766544333221 257899999999
Q ss_pred EEEee---------------------------------CCCcEEEEeCCCC----------CcccEEEEEEcCCCCEEEE
Q psy10953 68 IASGA---------------------------------LDGIINIFDANTG----------HSSWVLSTAFTRDGKFFIS 104 (181)
Q Consensus 68 l~~~~---------------------------------~d~~v~i~d~~~~----------~~~~v~~~~~s~~~~~l~~ 104 (181)
|++++ .+..+++||+.++ +...+..++|+|+|+.+++
T Consensus 195 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 195 LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 99887 4467999998643 3356889999999999888
Q ss_pred EeCCC-----cEEEEecCCCceeeee-e--cCC---cEEEEEEcc--CCCEEEEEcCCCcEEEEeCC-CCeeEEEcC
Q psy10953 105 ASADH-----TVRVWNFARRENMHTF-K--HAD---QVWCVCVAP--DGDKFVSVGEDKAVHMYSYK-PEEEVEVNG 167 (181)
Q Consensus 105 ~~~d~-----~i~v~d~~~~~~~~~~-~--~~~---~v~~~~~sp--~g~~l~~~~~d~~v~i~~~~-~~~~~~~~~ 167 (181)
++.++ .|++||+.+++....+ . ... .+..++|+| ||+++++++.++.+++|.+. .+..+....
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 77665 8999999988333222 1 221 235689999 99999999889999999876 444444443
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=1.2e-15 Score=116.52 Aligned_cols=150 Identities=13% Similarity=0.270 Sum_probs=106.9
Q ss_pred EEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCc-------EE-----EEE-ecCCceEEEEEECCCCCEEEEee-CCCcEE
Q psy10953 14 MWNVVFSPDDKYVLSGS-QSGKINLYGVETGK-------LE-----QIF-DTRGKFTLSIAYSTDGHWIASGA-LDGIIN 78 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~-~d~~i~~~d~~~~~-------~~-----~~~-~~~~~~~~~~~~s~d~~~l~~~~-~d~~v~ 78 (181)
+.+++|+|||+++++++ .++.|++|++.... +. ... ...+.....++|+|||+++++++ .++.|.
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 236 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVI 236 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEE
Confidence 47799999999776554 58899999887443 21 111 12334456899999999887766 689999
Q ss_pred EEeCCCCC-------------cccEEEEEEcCCCCEEEEEeCC--CcEEEEecC--CCc--eeeeeecCCcEEEEEEccC
Q psy10953 79 IFDANTGH-------------SSWVLSTAFTRDGKFFISASAD--HTVRVWNFA--RRE--NMHTFKHADQVWCVCVAPD 139 (181)
Q Consensus 79 i~d~~~~~-------------~~~v~~~~~s~~~~~l~~~~~d--~~i~v~d~~--~~~--~~~~~~~~~~v~~~~~sp~ 139 (181)
+||+.++. ...+..++|+|+|++|+++..+ +.|.+|++. +++ .+..+.....+.+++|+|+
T Consensus 237 v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd 316 (361)
T 3scy_A 237 AFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN 316 (361)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT
T ss_pred EEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC
Confidence 99986431 1235689999999988666654 889999985 333 2333333446789999999
Q ss_pred CCEEEEEc-CCCcEEEEeCC--CCeeE
Q psy10953 140 GDKFVSVG-EDKAVHMYSYK--PEEEV 163 (181)
Q Consensus 140 g~~l~~~~-~d~~v~i~~~~--~~~~~ 163 (181)
|++|++++ .++.|.+|.+. +++..
T Consensus 317 g~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 317 GKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp SCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 99888877 56899997665 44433
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=6e-17 Score=133.91 Aligned_cols=151 Identities=11% Similarity=0.021 Sum_probs=113.6
Q ss_pred EEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 14 MWNVVFSPDDKYVLSGSQS---------GKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d---------~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+.+++|||||++|++++.+ +.+.+||+.+++...+... +...+..++|||||++|++++. +.+++||+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~ 141 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAH 141 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESS
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEEC
Confidence 7889999999999998764 6788999998886333222 1222457899999999998876 78999998
Q ss_pred CCCCc--------cc------------------EEEEEEcCCCCEEEEEeCCC---------------------------
Q psy10953 83 NTGHS--------SW------------------VLSTAFTRDGKFFISASADH--------------------------- 109 (181)
Q Consensus 83 ~~~~~--------~~------------------v~~~~~s~~~~~l~~~~~d~--------------------------- 109 (181)
.++.. .. +..++|||||++|++++.++
T Consensus 142 ~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (723)
T 1xfd_A 142 VGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA 221 (723)
T ss_dssp SSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred CCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence 75421 11 26799999999998887543
Q ss_pred -------cEEEEecCCCceeeeee-c------CCcEEEEEEccCCCEEEEEcC----CCcEEEEeCCCCeeEEE
Q psy10953 110 -------TVRVWNFARRENMHTFK-H------ADQVWCVCVAPDGDKFVSVGE----DKAVHMYSYKPEEEVEV 165 (181)
Q Consensus 110 -------~i~v~d~~~~~~~~~~~-~------~~~v~~~~~sp~g~~l~~~~~----d~~v~i~~~~~~~~~~~ 165 (181)
.|++||+.+++....+. + ...+..++|||||+++++.+. +..|++|+..+++...+
T Consensus 222 G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 222 GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp TSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred CCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 79999998876444443 2 456889999999998876653 25799999988765544
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=1.3e-15 Score=115.65 Aligned_cols=151 Identities=19% Similarity=0.297 Sum_probs=108.6
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEE--ec-CCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCC--C
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIF--DT-RGKFTLSIAYSTDGHWIAS-GALDGIINIFDANT--G 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~--~~-~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~--~ 85 (181)
.+.+++|+|||+++++...++.|++|++. ++++.... .. .+.....++|+|||+++++ ...++.+.+|++.. +
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 36789999999966666678899999998 66554322 22 2334557999999996665 56688999998753 2
Q ss_pred C----------------cccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCC---ceeeeee-cCCcEEEEEEccCCCEEE
Q psy10953 86 H----------------SSWVLSTAFTRDGKFF-ISASADHTVRVWNFARR---ENMHTFK-HADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 86 ~----------------~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~---~~~~~~~-~~~~v~~~~~sp~g~~l~ 144 (181)
. ...+..++|+|+|++| ++...++.|.+|++... ..+..+. +...+..++|+|||++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEE
Confidence 1 0346779999999976 55666899999998732 3333333 344588999999999888
Q ss_pred EEcC-CCcEEEEeC--CCCeeE
Q psy10953 145 SVGE-DKAVHMYSY--KPEEEV 163 (181)
Q Consensus 145 ~~~~-d~~v~i~~~--~~~~~~ 163 (181)
+++. ++.|.+|++ .+++..
T Consensus 302 v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 302 VVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEETTTTEEEEEEECTTTCCEE
T ss_pred EEEcCCCcEEEEEEeCCCCeEE
Confidence 8775 489999955 445443
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=2.3e-16 Score=119.10 Aligned_cols=146 Identities=16% Similarity=0.257 Sum_probs=113.1
Q ss_pred EEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCcE---EEEEecCCceEEEEEECCCCCEEEEeeCCCcEE
Q psy10953 14 MWNVVFSPDDKYVLSGSQS------------GKINLYGVETGKL---EQIFDTRGKFTLSIAYSTDGHWIASGALDGIIN 78 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d------------~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~ 78 (181)
+..++|+|||+++++++.+ +.|.+||+.+++. ...+.... .+.+++|+|||+ +++++. .+.
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~-l~~~~~--~i~ 169 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMRAADDGS-LYVAGP--DIY 169 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCEEECTTSC-EEEESS--SEE
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-cccceeECCCCc-EEEccC--cEE
Confidence 5789999999999988865 8999999988543 23343333 355788999999 555543 399
Q ss_pred EEeCCCCCc------c----------------------------------------------------------------
Q psy10953 79 IFDANTGHS------S---------------------------------------------------------------- 88 (181)
Q Consensus 79 i~d~~~~~~------~---------------------------------------------------------------- 88 (181)
+||+.++.. .
T Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (349)
T 1jmx_B 170 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 249 (349)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEE
T ss_pred EEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecc
Confidence 999864310 0
Q ss_pred ------cEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 89 ------WVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 89 ------~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
.+..++|+| +|++++++ ++.|++||+.+++.+..+.....+++++|+|+|++|++++.++.|.+|+..+++
T Consensus 250 ~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 250 FADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred cccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 234566779 99988877 789999999998877777766668899999999999888888999999999887
Q ss_pred eEEE
Q psy10953 162 EVEV 165 (181)
Q Consensus 162 ~~~~ 165 (181)
.+..
T Consensus 328 ~~~~ 331 (349)
T 1jmx_B 328 KVKN 331 (349)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7653
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=1.6e-16 Score=131.15 Aligned_cols=145 Identities=14% Similarity=0.158 Sum_probs=113.9
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----CC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT-----GH 86 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-----~~ 86 (181)
..+.+++|||| +.++.+. ++++++||+.+++....... ...+.+++|||||++|+++ .++.|++||+.+ +.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDT-NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECC-TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCC-cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 45889999999 6665554 59999999999887665543 3334578999999999885 689999999876 43
Q ss_pred c--------cc--------------EEEEEEcCCCCEEEEEe---------------------------------CCCcE
Q psy10953 87 S--------SW--------------VLSTAFTRDGKFFISAS---------------------------------ADHTV 111 (181)
Q Consensus 87 ~--------~~--------------v~~~~~s~~~~~l~~~~---------------------------------~d~~i 111 (181)
. .. +..++|+|||++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 1 11 36889999999999887 44679
Q ss_pred EEEecCCCceeeee---ecCCcEEEEEEccCCCEEEEEcCCC-----cEEEEeCCCC
Q psy10953 112 RVWNFARRENMHTF---KHADQVWCVCVAPDGDKFVSVGEDK-----AVHMYSYKPE 160 (181)
Q Consensus 112 ~v~d~~~~~~~~~~---~~~~~v~~~~~sp~g~~l~~~~~d~-----~v~i~~~~~~ 160 (181)
++||+.+++..... .+...+.+++|+|||+.|++++.++ .|++|+..++
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 99999887754433 2445789999999999999887665 8999999888
No 151
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.73 E-value=5.7e-16 Score=125.18 Aligned_cols=143 Identities=15% Similarity=0.191 Sum_probs=118.3
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC--CCC-------Ccc
Q psy10953 18 VFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA--NTG-------HSS 88 (181)
Q Consensus 18 ~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~--~~~-------~~~ 88 (181)
+|+|++..+++++.|++|.+||..+++++..+..... +..+.|+|||++|++++.|+.|++||+ .++ ...
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC
Confidence 4889999999999999999999999999888874333 568999999999999999999999999 543 223
Q ss_pred cEEEEEEcC----CCCEEEEEeC-CCcEEEEecCCCceeeeeec-----------CC-cEEEEEEccCCCE-EEEEcCCC
Q psy10953 89 WVLSTAFTR----DGKFFISASA-DHTVRVWNFARRENMHTFKH-----------AD-QVWCVCVAPDGDK-FVSVGEDK 150 (181)
Q Consensus 89 ~v~~~~~s~----~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~-----------~~-~v~~~~~sp~g~~-l~~~~~d~ 150 (181)
.+..++|+| +|+++++++. +++|.+||..+.+.+..+.. +. .+..++++|+++. +++...++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 568899999 9999888884 89999999998887766542 22 6889999998766 55666789
Q ss_pred cEEEEeCCCCe
Q psy10953 151 AVHMYSYKPEE 161 (181)
Q Consensus 151 ~v~i~~~~~~~ 161 (181)
.|.+|++.+..
T Consensus 303 ~i~vvd~~~~~ 313 (543)
T 1nir_A 303 KVLLVNYKDID 313 (543)
T ss_dssp EEEEEECTTSS
T ss_pred eEEEEEecCCC
Confidence 99999987643
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.72 E-value=7.5e-16 Score=116.96 Aligned_cols=149 Identities=11% Similarity=0.162 Sum_probs=105.9
Q ss_pred eeeEEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCcEEE--EEecCC---------ceEEEEEECCCCCEEEEeeCCCcE
Q psy10953 11 PVDMWNVVFSPDDKYVLSGS-QSGKINLYGVE-TGKLEQ--IFDTRG---------KFTLSIAYSTDGHWIASGALDGII 77 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~-~~~~~~--~~~~~~---------~~~~~~~~s~d~~~l~~~~~d~~v 77 (181)
...+..++|+|||++|++++ .++++.+|++. +++... .+...+ ..+.+++|+|||+.+++...++.+
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v 164 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKV 164 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEE
Confidence 33457899999999988887 67899999995 444332 222211 135679999999966666678899
Q ss_pred EEEeCC-CCC-----------cccEEEEEEcCCCCEEEE-EeCCCcEEEEecCC--Cce--eeeee-cC------CcEEE
Q psy10953 78 NIFDAN-TGH-----------SSWVLSTAFTRDGKFFIS-ASADHTVRVWNFAR--REN--MHTFK-HA------DQVWC 133 (181)
Q Consensus 78 ~i~d~~-~~~-----------~~~v~~~~~s~~~~~l~~-~~~d~~i~v~d~~~--~~~--~~~~~-~~------~~v~~ 133 (181)
.+|++. .+. ...+..++|+|+|+++++ ...++.+++|++.. ++. ...+. .. ..+..
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA 244 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE
T ss_pred EEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee
Confidence 999987 331 124667899999996555 55678999999874 332 11221 11 35889
Q ss_pred EEEccCCCEEE-EEcCCCcEEEEeCCC
Q psy10953 134 VCVAPDGDKFV-SVGEDKAVHMYSYKP 159 (181)
Q Consensus 134 ~~~sp~g~~l~-~~~~d~~v~i~~~~~ 159 (181)
++|+|||++++ +...++.|.+|++..
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 99999999875 455688999999873
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=1.8e-16 Score=136.57 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=124.3
Q ss_pred eEEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEE-EEeCCCC-----
Q psy10953 13 DMWNVVFS-PDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIIN-IFDANTG----- 85 (181)
Q Consensus 13 ~~~~~~~s-~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~-i~d~~~~----- 85 (181)
.+..++|| |||++|++++ ++.+.+|++.+++........+..+..++|+ ||+.|++++.++.+. +||+..+
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l 374 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF 374 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe
Confidence 46789999 9999999887 8899999999887665433333256789999 999999988888888 8887643
Q ss_pred --CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEEEEEcCCC----------cE
Q psy10953 86 --HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKFVSVGEDK----------AV 152 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~----------~v 152 (181)
+...+..++|+|+|++|++++.++.|++||+.+++..... .+...+.+++|||||++|++++.++ .|
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 4567889999999999999999999999999988776666 4677789999999999998887643 89
Q ss_pred EEEeCCCCeeEEEc
Q psy10953 153 HMYSYKPEEEVEVN 166 (181)
Q Consensus 153 ~i~~~~~~~~~~~~ 166 (181)
++|++.+++...+.
T Consensus 455 ~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 455 HVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEETTTTEEEECS
T ss_pred EEEECCCCcEEEee
Confidence 99999887644333
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=2.2e-16 Score=135.98 Aligned_cols=151 Identities=11% Similarity=0.120 Sum_probs=122.7
Q ss_pred eeccCee-eEEEEEEcCCCCEEEEEeCCCcEE-EEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 6 KINVGPV-DMWNVVFSPDDKYVLSGSQSGKIN-LYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 6 ~~~~~~~-~~~~~~~s~~g~~l~~~~~d~~i~-~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
.+..++. .+..++|+ ||+.+++++.+..+. +|++.+++...+. .+...+..++|+|||++|++++.++.+++||+.
T Consensus 331 ~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 331 KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECC
Confidence 3444444 68899999 999999998888898 9999888766554 455566789999999999999999999999997
Q ss_pred CC--------CcccEEEEEEcCCCCEEEEEeCCC----------cEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 84 TG--------HSSWVLSTAFTRDGKFFISASADH----------TVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 84 ~~--------~~~~v~~~~~s~~~~~l~~~~~d~----------~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
++ |...+..++|+|+|++|++++.++ .|++||+.+++......+...+..++|+|||++|+.
T Consensus 409 tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 409 TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEE
Confidence 64 445567899999999998887644 899999998774333346677889999999999999
Q ss_pred EcCCCcEEEEeCC
Q psy10953 146 VGEDKAVHMYSYK 158 (181)
Q Consensus 146 ~~~d~~v~i~~~~ 158 (181)
++.++....|+..
T Consensus 489 ~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 489 LSYRSLDPSPDRV 501 (1045)
T ss_dssp EESCCCCCEECSS
T ss_pred EecccCCcCcchh
Confidence 9988887888754
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=7e-16 Score=116.48 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=114.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC-ceEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCCc------
Q psy10953 16 NVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG-KFTLSIAYSTDGHWIA-SGALDGIINIFDANTGHS------ 87 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~d~~~l~-~~~~d~~v~i~d~~~~~~------ 87 (181)
.++++++++++++++.+++|++||..+++....+.... .....++|+|+|+.++ +...++.+.+||+.++..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678899999999999999999999999887776544 1234789999998665 455789999999875421
Q ss_pred --------ccEEEEEEcCCCCEEEEEeCC------------CcEEEEecCCCc---eeeeeecCCcEEEEEEccCCCEEE
Q psy10953 88 --------SWVLSTAFTRDGKFFISASAD------------HTVRVWNFARRE---NMHTFKHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 88 --------~~v~~~~~s~~~~~l~~~~~d------------~~i~v~d~~~~~---~~~~~~~~~~v~~~~~sp~g~~l~ 144 (181)
..+..++|+|+|+++++++.+ +.|.+||+.+++ .+....++..+.+++|+|+|+ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 115678999999998888855 899999998743 334445556788999999999 65
Q ss_pred EEcCCCcEEEEeCCCCeeEEEcC
Q psy10953 145 SVGEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~~~~ 167 (181)
+++. .|.+|+..+++.+....
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEEC
T ss_pred EccC--cEEEEeCCCCceecccc
Confidence 5543 49999998887665443
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.70 E-value=1.4e-15 Score=114.19 Aligned_cols=142 Identities=15% Similarity=0.229 Sum_probs=113.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCcEEEEEecCCc--eEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCCc-------c-----
Q psy10953 24 KYVLSGSQSGKINLYGVETGKLEQIFDTRGK--FTLSIAYSTDGHWIA-SGALDGIINIFDANTGHS-------S----- 88 (181)
Q Consensus 24 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~d~~~l~-~~~~d~~v~i~d~~~~~~-------~----- 88 (181)
+++++++.+++|++||..+++....+..... .+..++|+|+|+.++ +...++.|.+||+.++.. .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5788999999999999999998877764441 245799999998765 455678999999875431 1
Q ss_pred -cEEEEEEcCCCCEEEEEe------------CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 89 -WVLSTAFTRDGKFFISAS------------ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 89 -~v~~~~~s~~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
.+..++|+|+|+++++++ .++.|++||+.+++....+.....+.+++|+|+|++++++ ++.|++|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 345689999999888876 5789999999988877777666678889999999988877 6889999
Q ss_pred eCCCCeeEEEcC
Q psy10953 156 SYKPEEEVEVNG 167 (181)
Q Consensus 156 ~~~~~~~~~~~~ 167 (181)
+..+++.+....
T Consensus 160 d~~~~~~~~~~~ 171 (337)
T 1pby_B 160 DPEAGTLVEDKP 171 (337)
T ss_dssp ETTTTEEEEEEC
T ss_pred ECCCCcEeeeee
Confidence 999887765443
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.69 E-value=4.8e-16 Score=125.97 Aligned_cols=139 Identities=12% Similarity=0.121 Sum_probs=108.7
Q ss_pred EEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC----CcEEEEeCCCC----
Q psy10953 15 WNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD----GIINIFDANTG---- 85 (181)
Q Consensus 15 ~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d----~~v~i~d~~~~---- 85 (181)
...+|+|||+.+ ++++.++.+.+||+.+++...+..... .++.|||||++|++++.+ ..+++||+.++
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~ 189 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV 189 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE
T ss_pred eeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE
Confidence 456888888643 333444555699999998777665444 478999999999988776 78999998654
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCC--cEEEEecCCCceeeeee-cCCcEEEEE--------EccCCCEEEEEcCCCc
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADH--TVRVWNFARRENMHTFK-HADQVWCVC--------VAPDGDKFVSVGEDKA 151 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~-~~~~v~~~~--------~sp~g~~l~~~~~d~~ 151 (181)
+...+..++|||||+.|+++..++ .|++||+.+++.. ... +...+..++ |+|||+.+++++.++.
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence 445678999999999999888888 8999999887766 333 444455555 9999988899999999
Q ss_pred EEEEeC
Q psy10953 152 VHMYSY 157 (181)
Q Consensus 152 v~i~~~ 157 (181)
+++|++
T Consensus 269 ~~l~~~ 274 (582)
T 3o4h_A 269 SAVFID 274 (582)
T ss_dssp EEEEET
T ss_pred EEEEEE
Confidence 999999
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.68 E-value=7.9e-17 Score=133.39 Aligned_cols=148 Identities=11% Similarity=0.116 Sum_probs=107.6
Q ss_pred EEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 14 MWNVVFSPDDKYVLSGSQ---------SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
+..++|||||++|++++. +++|++||+.+++........ ..+..++|||||+.|+++. ++.|++||+.+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-SSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC-cccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 678999999999998876 789999999998862111111 2245789999999999885 78999999865
Q ss_pred CCc---------ccE-----------------EEEEEcCCCCEEEEEeCCC-----------------------------
Q psy10953 85 GHS---------SWV-----------------LSTAFTRDGKFFISASADH----------------------------- 109 (181)
Q Consensus 85 ~~~---------~~v-----------------~~~~~s~~~~~l~~~~~d~----------------------------- 109 (181)
+.. ..+ ..++|||||++|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 321 112 3799999999999887542
Q ss_pred -----cEEEEecCCCcee--eee-------ecCCcEEEEEEccCCCEEEEEcCC----CcEEEEe----CCCCeeE
Q psy10953 110 -----TVRVWNFARRENM--HTF-------KHADQVWCVCVAPDGDKFVSVGED----KAVHMYS----YKPEEEV 163 (181)
Q Consensus 110 -----~i~v~d~~~~~~~--~~~-------~~~~~v~~~~~sp~g~~l~~~~~d----~~v~i~~----~~~~~~~ 163 (181)
.|++||+.+++.. ..+ .+...+..++||||++.+++.... ..|.+|+ ..+++..
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7889999887642 111 245568999999998777664422 2488888 6665443
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=5.5e-15 Score=113.44 Aligned_cols=149 Identities=15% Similarity=0.251 Sum_probs=109.3
Q ss_pred eeEEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCcEEEE--Eec--CCceEEEEEECCCCCEEEEeeC-CCcEEEEeCC-
Q psy10953 12 VDMWNVVFSPDDKYVLSGS-QSGKINLYGVE-TGKLEQI--FDT--RGKFTLSIAYSTDGHWIASGAL-DGIINIFDAN- 83 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~-~~~~~~~--~~~--~~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~- 83 (181)
..+.+++|+|||+++++++ .++.|++|++. +++.... +.. ++.....++|+|||+++++++. ++.+.+|+..
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence 3568899999999888765 46799999998 7876432 321 2445678999999999887764 6889998653
Q ss_pred -CCC------------------cc------cEEEEE-EcCCCCEEEEEeCCC------cEEEEecC-CCceee---eee-
Q psy10953 84 -TGH------------------SS------WVLSTA-FTRDGKFFISASADH------TVRVWNFA-RRENMH---TFK- 126 (181)
Q Consensus 84 -~~~------------------~~------~v~~~~-~s~~~~~l~~~~~d~------~i~v~d~~-~~~~~~---~~~- 126 (181)
++. .. .+..++ |+|+|++|++++.+. .|.+|++. +++... ...
T Consensus 225 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~ 304 (365)
T 1jof_A 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT 304 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC
T ss_pred CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec
Confidence 221 10 477899 999999887766432 79999986 454332 122
Q ss_pred cCCcEEEEEEcc---CCCEEEEEcCC-CcEEEEeCCCC
Q psy10953 127 HADQVWCVCVAP---DGDKFVSVGED-KAVHMYSYKPE 160 (181)
Q Consensus 127 ~~~~v~~~~~sp---~g~~l~~~~~d-~~v~i~~~~~~ 160 (181)
+...+..++|+| ||+++++++.+ +.|.+|++...
T Consensus 305 ~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 334567889999 89999998864 89999999766
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.67 E-value=3.8e-15 Score=114.41 Aligned_cols=163 Identities=15% Similarity=0.118 Sum_probs=119.5
Q ss_pred ceeeeccCeeeEEE-----EEEcCCCCEEEEEeC-CC--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC
Q psy10953 3 QISKINVGPVDMWN-----VVFSPDDKYVLSGSQ-SG--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD 74 (181)
Q Consensus 3 ~~~~~~~~~~~~~~-----~~~s~~g~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d 74 (181)
++..++.++..... .+|||||++|++++. ++ .|.+||+.+++..++...+...+....|+|||+.|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34555555544444 789999999998887 66 38888999998877765555443357899999999999999
Q ss_pred CcEEEEeCCCCCcc--------cEEE--EEEcCCCCEEEEE----------------------eCCCcEEEEecCCCcee
Q psy10953 75 GIINIFDANTGHSS--------WVLS--TAFTRDGKFFISA----------------------SADHTVRVWNFARRENM 122 (181)
Q Consensus 75 ~~v~i~d~~~~~~~--------~v~~--~~~s~~~~~l~~~----------------------~~d~~i~v~d~~~~~~~ 122 (181)
+.+++||+.++... .+.. ..++|++++++.. ..+..|++||+.+++..
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 99999999876532 2222 2358999988743 23467999999988765
Q ss_pred eeeecCCcEEEEEEcc-CCCEEEEEcCC------CcEEEEeCCCCeeEEE
Q psy10953 123 HTFKHADQVWCVCVAP-DGDKFVSVGED------KAVHMYSYKPEEEVEV 165 (181)
Q Consensus 123 ~~~~~~~~v~~~~~sp-~g~~l~~~~~d------~~v~i~~~~~~~~~~~ 165 (181)
....+...+..++|+| ||+.|+.++.+ ..|.+++...+....+
T Consensus 182 ~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 182 VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence 5556667789999999 99998877753 3788888765544433
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=2.2e-15 Score=125.55 Aligned_cols=133 Identities=13% Similarity=0.141 Sum_probs=101.8
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCce-----EEEEEECCCCCEEEEeeCC---------CcEE
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKF-----TLSIAYSTDGHWIASGALD---------GIIN 78 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~s~d~~~l~~~~~d---------~~v~ 78 (181)
..++++|+|||++++++ |++|++||+.+++...++..+... ...+.|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35689999999988886 899999999999988777655321 1247899999999988765 5667
Q ss_pred EEeCCCC-------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcE-----------------E
Q psy10953 79 IFDANTG-------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--HADQV-----------------W 132 (181)
Q Consensus 79 i~d~~~~-------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v-----------------~ 132 (181)
+||+.++ +...+..++|||||+.|+.+. ++.|++||+.++....... +...+ .
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 9999754 345688999999999998885 6899999998766432211 21212 2
Q ss_pred EEEEccCCCEEEEEcC
Q psy10953 133 CVCVAPDGDKFVSVGE 148 (181)
Q Consensus 133 ~~~~sp~g~~l~~~~~ 148 (181)
.++|||||++|+.++.
T Consensus 175 ~~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQF 190 (740)
T ss_dssp CEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEEEE
Confidence 4889999999998763
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.66 E-value=2.9e-14 Score=108.83 Aligned_cols=147 Identities=16% Similarity=0.250 Sum_probs=105.1
Q ss_pred eEEEEEEcCCCCEEEEEeCC----CcEEEEeCCC--CcEEEE--EecCCceEEEEEECCCCCEEEEee-CCCcEEEEeCC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS----GKINLYGVET--GKLEQI--FDTRGKFTLSIAYSTDGHWIASGA-LDGIINIFDAN 83 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d----~~i~~~d~~~--~~~~~~--~~~~~~~~~~~~~s~d~~~l~~~~-~d~~v~i~d~~ 83 (181)
.+..++|+|||++|++++.+ +.+.+|++.. +++... ....+.....+++ ++++|++++ .++.+.+|++.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBC
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeC
Confidence 34668999999999988875 7999998865 554332 2223444456777 888777765 57899999985
Q ss_pred CCC----------------------cccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCce--------------eeeee
Q psy10953 84 TGH----------------------SSWVLSTAFTRDGKFFISAS-ADHTVRVWNFARREN--------------MHTFK 126 (181)
Q Consensus 84 ~~~----------------------~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~--------------~~~~~ 126 (181)
... ...+..++|+|+|+++++++ .++.+++|++..... .....
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 208 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA 208 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC
Confidence 321 11246799999999665555 578999998875431 11223
Q ss_pred cCCcEEEEEEccCCCEEEEEc-CCCcEEEEeCCCCe
Q psy10953 127 HADQVWCVCVAPDGDKFVSVG-EDKAVHMYSYKPEE 161 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~~~~~ 161 (181)
....+..++|+|||+++++++ .++.|.+|++.++.
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 445688999999999887777 58899999997654
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.65 E-value=3.2e-15 Score=121.19 Aligned_cols=155 Identities=11% Similarity=0.099 Sum_probs=109.7
Q ss_pred eeeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC---CCcEEEE--eC--
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQ-SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---DGIINIF--DA-- 82 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---d~~v~i~--d~-- 82 (181)
...++.++|+|||++||+++. |+++++|++.+++..++...+...+..+.|||| +.+++++. +....+| ++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 446899999999999998887 999999999777766555444345678999999 76666654 4545555 44
Q ss_pred CCCC-----cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC----CcE
Q psy10953 83 NTGH-----SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED----KAV 152 (181)
Q Consensus 83 ~~~~-----~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d----~~v 152 (181)
.... .......+|+|+|+ .+++...++.+.+||+.+++......++. ++++|||||++++.++.+ +.|
T Consensus 100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp TTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEE
T ss_pred CCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEE
Confidence 2211 11234568888886 33344445556699998876554444444 789999999999988866 679
Q ss_pred EEEeCCCCeeEEEcCC
Q psy10953 153 HMYSYKPEEEVEVNGG 168 (181)
Q Consensus 153 ~i~~~~~~~~~~~~~~ 168 (181)
++|++.+++...+..+
T Consensus 178 ~~~d~~~g~~~~l~~~ 193 (582)
T 3o4h_A 178 FTSNLSSGGLRVFDSG 193 (582)
T ss_dssp EEEETTTCCCEEECCS
T ss_pred EEEcCCCCCceEeecC
Confidence 9999987766555433
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=6.7e-15 Score=120.73 Aligned_cols=151 Identities=13% Similarity=0.148 Sum_probs=110.9
Q ss_pred CeeeEEEEEEcCCCCEEEEEeCC----------CcEEEEeCCC------CcEEEEEecCCceEEEEEECCCCCEEEEeeC
Q psy10953 10 GPVDMWNVVFSPDDKYVLSGSQS----------GKINLYGVET------GKLEQIFDTRGKFTLSIAYSTDGHWIASGAL 73 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~~~~~d----------~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~ 73 (181)
+...+..++|||||+.|++++.+ ..|++||+.+ ++...+...+...+..++|||||++|+..+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 34567899999999999988877 5899999988 6654443033344557899999999998775
Q ss_pred C--------CcEEEEeCC-CC-----------CcccEEEEEEcCCCCEEEEEeCCC--cEEEEecCCCceeeeeecCCc-
Q psy10953 74 D--------GIINIFDAN-TG-----------HSSWVLSTAFTRDGKFFISASADH--TVRVWNFARRENMHTFKHADQ- 130 (181)
Q Consensus 74 d--------~~v~i~d~~-~~-----------~~~~v~~~~~s~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~- 130 (181)
+ ..+++||+. ++ +...+..++|+|||++++++..++ .|++||+.+++......+...
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBS
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccc
Confidence 5 379999987 44 134577899999999888888887 677777656554333222111
Q ss_pred --------EEEEEEccCCCEEEEEcCCCcEEEE--eCCCCe
Q psy10953 131 --------VWCVCVAPDGDKFVSVGEDKAVHMY--SYKPEE 161 (181)
Q Consensus 131 --------v~~~~~sp~g~~l~~~~~d~~v~i~--~~~~~~ 161 (181)
+..++|+|+++.+++++. +.+++| +...++
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred cCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 457899999999999998 999999 444444
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=6.2e-15 Score=113.16 Aligned_cols=144 Identities=14% Similarity=0.208 Sum_probs=108.0
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcEEEEEec--CCceEEEEEECCCCCE--EEEee-------------CC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVE-TGKLEQIFDT--RGKFTLSIAYSTDGHW--IASGA-------------LD 74 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~-~~~~~~~~~~--~~~~~~~~~~s~d~~~--l~~~~-------------~d 74 (181)
.+..++|+|||++|++++.+ .|.+|++. ++++...... .+. ...++|+|||++ +++++ .+
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCC-CccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 46789999999999998888 99999997 7876554332 132 235789999995 44443 68
Q ss_pred CcEEEEeCCC-C------------CcccEEEEEEcCCCCEEEEEeC-CCcEEEEecC-CCcee--eeee---cCCcEEEE
Q psy10953 75 GIINIFDANT-G------------HSSWVLSTAFTRDGKFFISASA-DHTVRVWNFA-RRENM--HTFK---HADQVWCV 134 (181)
Q Consensus 75 ~~v~i~d~~~-~------------~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~-~~~~~--~~~~---~~~~v~~~ 134 (181)
+.+.+|++.. + +...+..++|+|+|+++++++. ++.|++||+. +++.. ..+. +...+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 8999999852 2 2245778999999998877664 6789999998 56532 2232 24568999
Q ss_pred EEccCCCEEEEEcC-CCcEEEEeCC
Q psy10953 135 CVAPDGDKFVSVGE-DKAVHMYSYK 158 (181)
Q Consensus 135 ~~sp~g~~l~~~~~-d~~v~i~~~~ 158 (181)
+|+|||+++++++. ++.|.+|++.
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCeEEEEEEe
Confidence 99999999887775 6899999875
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=2.3e-13 Score=103.10 Aligned_cols=154 Identities=12% Similarity=0.148 Sum_probs=119.3
Q ss_pred eeEEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCCcEEEEEec-CCceEEEEEECCCCC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQS------------------------GKINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGH 66 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d------------------------~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~ 66 (181)
..+.+++++|+|+++++...+ ++|.+||..++++...+.. .-.....++++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 457899999999999888777 4799999999998765542 222456899999999
Q ss_pred EEEEeeCCCcEEEEeCCCC------------------CcccEEEEEEcC-CCCEEEEEe-CCCcEEEEecCCCceeeeee
Q psy10953 67 WIASGALDGIINIFDANTG------------------HSSWVLSTAFTR-DGKFFISAS-ADHTVRVWNFARRENMHTFK 126 (181)
Q Consensus 67 ~l~~~~~d~~v~i~d~~~~------------------~~~~v~~~~~s~-~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~ 126 (181)
++++...++.|++||.... +...+..++++| +++++++.+ .++.|++|| .++..+..+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEec
Confidence 8888888899999997532 122578999999 889888886 689999999 4555555543
Q ss_pred c-C----------CcEEEEEEccC-CCEEEEEcCCCcEEEEeCCCCeeEEEc
Q psy10953 127 H-A----------DQVWCVCVAPD-GDKFVSVGEDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 127 ~-~----------~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~~~~~~~~~ 166 (181)
. . ..+.+++++|+ ++.+++...++.|++|+..+++.+...
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 1 1 23889999999 677777778899999999877666544
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=2.3e-14 Score=117.58 Aligned_cols=152 Identities=9% Similarity=0.042 Sum_probs=106.0
Q ss_pred EEEEc--CCCCE-EEEEeC-CCcEEEEeCC--C-CcEEEEEec----CCceEEEEEECCCCCEEEEeeCC----------
Q psy10953 16 NVVFS--PDDKY-VLSGSQ-SGKINLYGVE--T-GKLEQIFDT----RGKFTLSIAYSTDGHWIASGALD---------- 74 (181)
Q Consensus 16 ~~~~s--~~g~~-l~~~~~-d~~i~~~d~~--~-~~~~~~~~~----~~~~~~~~~~s~d~~~l~~~~~d---------- 74 (181)
...|+ |||++ |+.++. +..|.++++. + ++...+... +...+..++|||||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 45555 99998 776654 5667777776 3 544333321 34456689999999999988776
Q ss_pred CcEEEEeCCC------C--------CcccEEEEEEcCCCCEEEEEeCC--------CcEEEEecC-CC---ceeeeee-c
Q psy10953 75 GIINIFDANT------G--------HSSWVLSTAFTRDGKFFISASAD--------HTVRVWNFA-RR---ENMHTFK-H 127 (181)
Q Consensus 75 ~~v~i~d~~~------~--------~~~~v~~~~~s~~~~~l~~~~~d--------~~i~v~d~~-~~---~~~~~~~-~ 127 (181)
..+++||+.+ + +...+..++|||||++|+.++.+ ..|++||+. ++ ....... +
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 5899999876 3 22345668999999999877744 379999998 45 3333333 3
Q ss_pred CCcEEEEEEccCCCEEEEEcCCC--cEEEEeCCCCeeEEEcC
Q psy10953 128 ADQVWCVCVAPDGDKFVSVGEDK--AVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 128 ~~~v~~~~~sp~g~~l~~~~~d~--~v~i~~~~~~~~~~~~~ 167 (181)
...+..++|+|||++++++..++ .|.+|+..+++...+..
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc
Confidence 56789999999999777777777 55566655555544443
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=8.5e-15 Score=122.03 Aligned_cols=164 Identities=9% Similarity=0.121 Sum_probs=112.8
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-CCceE-----------------EEEEECCCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-RGKFT-----------------LSIAYSTDG 65 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~-----------------~~~~~s~d~ 65 (181)
+.++..++..+...+|||||+.||.+. ++.|++|++.+++..++... +...+ ..+.|||||
T Consensus 104 ~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg 182 (740)
T 4a5s_A 104 LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG 182 (740)
T ss_dssp ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS
T ss_pred EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC
Confidence 445555566789999999999998885 78999999998876553221 11111 137899999
Q ss_pred CEEEEeeCCC------------------------------------cEEEEeCCC---C----------------CcccE
Q psy10953 66 HWIASGALDG------------------------------------IINIFDANT---G----------------HSSWV 90 (181)
Q Consensus 66 ~~l~~~~~d~------------------------------------~v~i~d~~~---~----------------~~~~v 90 (181)
++|+.++.|. .+++||+.+ + +...+
T Consensus 183 ~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (740)
T 4a5s_A 183 TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYL 262 (740)
T ss_dssp SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEE
T ss_pred CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEE
Confidence 9999875321 478899887 5 44567
Q ss_pred EEEEEcCCCCEEEEEeC----CCcEEEEecCCCc----ee--ee---eecCCcE-----EEEEEccCCCEEE-EEcC-CC
Q psy10953 91 LSTAFTRDGKFFISASA----DHTVRVWNFARRE----NM--HT---FKHADQV-----WCVCVAPDGDKFV-SVGE-DK 150 (181)
Q Consensus 91 ~~~~~s~~~~~l~~~~~----d~~i~v~d~~~~~----~~--~~---~~~~~~v-----~~~~~sp~g~~l~-~~~~-d~ 150 (181)
..++|+|||+.++.... +..|++||+.+++ +. .. ..+...+ ...+|+|||+.++ ..+. +|
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G 342 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC
Confidence 88999999997665543 2369999998876 11 11 1233333 3678999999877 6653 33
Q ss_pred --cEEEEeCCCCeeEEEcCC
Q psy10953 151 --AVHMYSYKPEEEVEVNGG 168 (181)
Q Consensus 151 --~v~i~~~~~~~~~~~~~~ 168 (181)
.|++|+...++...+..+
T Consensus 343 ~~~l~~~~~~~~~~~~lT~g 362 (740)
T 4a5s_A 343 YRHICYFQIDKKDCTFITKG 362 (740)
T ss_dssp CEEEEEEETTCSSCEESCCS
T ss_pred ceEEEEEECCCCceEecccC
Confidence 578888876665555444
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=1.1e-13 Score=106.43 Aligned_cols=149 Identities=13% Similarity=0.180 Sum_probs=110.7
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEeCCCCcEEEEEecC------CceEEEEEECCCCCEEEEeeC--CCcE
Q psy10953 16 NVVFSPDDKYVLSGS----------QSGKINLYGVETGKLEQIFDTR------GKFTLSIAYSTDGHWIASGAL--DGII 77 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s~d~~~l~~~~~--d~~v 77 (181)
.++|+|||+++++++ .+++|.+||..+.+....+... +.....+.++|||++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998886 3678999999998888766532 122346889999999988764 5678
Q ss_pred EEEeCCCCCc----------------------------------------ccEE--------------------------
Q psy10953 78 NIFDANTGHS----------------------------------------SWVL-------------------------- 91 (181)
Q Consensus 78 ~i~d~~~~~~----------------------------------------~~v~-------------------------- 91 (181)
.+||+.+... ..+.
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 8887632100 0000
Q ss_pred --------------------------------------------EEEEcCCCCEEEEEeC-----------CCcEEEEec
Q psy10953 92 --------------------------------------------STAFTRDGKFFISASA-----------DHTVRVWNF 116 (181)
Q Consensus 92 --------------------------------------------~~~~s~~~~~l~~~~~-----------d~~i~v~d~ 116 (181)
.++|+|+++.+..+.. ...|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 0466777665544332 347999999
Q ss_pred CCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC--eeEEEc
Q psy10953 117 ARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE--EEVEVN 166 (181)
Q Consensus 117 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~--~~~~~~ 166 (181)
.+++.+..+.... +++++|+|||+++++++. +.|.+||..++ +.+...
T Consensus 294 ~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 294 KTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp TTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred CCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 9998888887555 999999999999998886 99999999999 877653
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=2.3e-13 Score=100.63 Aligned_cols=146 Identities=10% Similarity=0.258 Sum_probs=111.7
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec--CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT--RGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
..+.+++++|+|+++++...++.|.+||.. ++....+.. .......++++++|+.+++...++.|++||....
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 199 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQ 199 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEE
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEE
Confidence 346889999999988887788999999964 565555542 2234568999999998777778899999997532
Q ss_pred -----CcccEEEEEEcCCCCEEEEEeCCC-cEEEEecCCCceeeeee-c--CCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 86 -----HSSWVLSTAFTRDGKFFISASADH-TVRVWNFARRENMHTFK-H--ADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 86 -----~~~~v~~~~~s~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~-~--~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+...+..++++|+|+++++...++ .|++||.. ++.+..+. + ...+.+++++|+|+.+++ +.++.|++|+
T Consensus 200 ~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp ESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEE
T ss_pred EccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEE
Confidence 124688999999999888887775 99999964 44455543 2 234789999999987776 5689999999
Q ss_pred CCCC
Q psy10953 157 YKPE 160 (181)
Q Consensus 157 ~~~~ 160 (181)
+...
T Consensus 278 ~~~~ 281 (286)
T 1q7f_A 278 YVQL 281 (286)
T ss_dssp CSCC
T ss_pred cccc
Confidence 8654
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=1.1e-13 Score=106.23 Aligned_cols=149 Identities=13% Similarity=0.106 Sum_probs=109.3
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEE--EEECCCCCEEEEe---------------------
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLS--IAYSTDGHWIASG--------------------- 71 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~s~d~~~l~~~--------------------- 71 (181)
..++|||||++|+.++.++.|++||+.+++...++..+...... +.++++++.++..
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp SSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred cceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 35789999999999999999999999999887776665554432 3459999988742
Q ss_pred -eCCCcEEEEeCCCCC-------cccEEEEEEcC-CCCEEEEEeCC------CcEEEEecCCCceeeeeecC--CcEEEE
Q psy10953 72 -ALDGIINIFDANTGH-------SSWVLSTAFTR-DGKFFISASAD------HTVRVWNFARRENMHTFKHA--DQVWCV 134 (181)
Q Consensus 72 -~~d~~v~i~d~~~~~-------~~~v~~~~~s~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~--~~v~~~ 134 (181)
..+..+++||+.++. ...+..++|+| +|+.++.+..+ ..|.++|...+.......+. ..+...
T Consensus 164 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHE 243 (388)
T ss_dssp GCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEE
T ss_pred cCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccc
Confidence 234679999988654 23467889999 99988777653 37888887665433333333 247788
Q ss_pred EEccCCCEEEEEcC-C-C---cEEEEeCCCCeeE
Q psy10953 135 CVAPDGDKFVSVGE-D-K---AVHMYSYKPEEEV 163 (181)
Q Consensus 135 ~~sp~g~~l~~~~~-d-~---~v~i~~~~~~~~~ 163 (181)
+|||||+.|+..+. + + .|++|++.+++..
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 99999998766553 2 2 3999999887643
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=7.5e-13 Score=99.80 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=112.2
Q ss_pred eccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC----CcEEEEeC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD----GIINIFDA 82 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d----~~v~i~d~ 82 (181)
+..+.....+++|+|+|++++++..++.|.+||..+++...........+.+++++++|+++++...+ +.+.+||.
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 33344456789999999988888889999999999888776554444557789999999987776666 68999997
Q ss_pred CCCC----------cccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEE-E
Q psy10953 83 NTGH----------SSWVLSTAFTRDGKFFISASA------DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFV-S 145 (181)
Q Consensus 83 ~~~~----------~~~v~~~~~s~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-~ 145 (181)
.++. ...+..++++|+|+++++... .+.|..+|..+++..........+.+++++|+|+.++ +
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEE
Confidence 6432 235788999999998877654 2456667665544332223334578999999998665 4
Q ss_pred EcCCCcEEEEeCCC
Q psy10953 146 VGEDKAVHMYSYKP 159 (181)
Q Consensus 146 ~~~d~~v~i~~~~~ 159 (181)
.+.++.|.+|+..+
T Consensus 200 ~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 200 ETTANRLHRIALED 213 (333)
T ss_dssp EGGGTEEEEEEECT
T ss_pred eCCCCeEEEEEecC
Confidence 45678999999864
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=9.9e-13 Score=97.80 Aligned_cols=152 Identities=14% Similarity=0.086 Sum_probs=112.8
Q ss_pred eeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+..+........+++|+|+|+ +++++..++.|..|+..++ ...+......+.+++++++|+++++...++.|.+||.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 344555555567899999998 7788888999999999877 4455555555678999999998877777789999998
Q ss_pred CCCCc------------ccEEEEEEcCCCCEEEEE----e-------------CCCcEEEEecCCCceeeeeecCCcEEE
Q psy10953 83 NTGHS------------SWVLSTAFTRDGKFFISA----S-------------ADHTVRVWNFARRENMHTFKHADQVWC 133 (181)
Q Consensus 83 ~~~~~------------~~v~~~~~s~~~~~l~~~----~-------------~d~~i~v~d~~~~~~~~~~~~~~~v~~ 133 (181)
.++.. ..+..++++|+|+++++. + ..+.|..++.. ++..........+.+
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCcc
Confidence 65431 134568999999988873 2 12456666655 333322334556789
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
++|+|+|+.+++.+.++.|.+|++.
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEeCCCCeEEEEEEC
Confidence 9999999999777778999999986
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=1.2e-12 Score=108.63 Aligned_cols=147 Identities=15% Similarity=0.201 Sum_probs=106.6
Q ss_pred eEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCc-----------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSG-----KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGI----------- 76 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~----------- 76 (181)
.+..++|||||++|+.+..++ +|++||+.+++.......... +..++|+|||+.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcc-cceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 467899999999998766543 899999999987764322222 346899999999999887765
Q ss_pred -----EEEEeCCCCC------------cccEEEEEEcCCCCEEEEEeC-----CCcEEEEecCC------Cc-eeeeee-
Q psy10953 77 -----INIFDANTGH------------SSWVLSTAFTRDGKFFISASA-----DHTVRVWNFAR------RE-NMHTFK- 126 (181)
Q Consensus 77 -----v~i~d~~~~~------------~~~v~~~~~s~~~~~l~~~~~-----d~~i~v~d~~~------~~-~~~~~~- 126 (181)
|++|++.++. ...+..+.|+|+|++|+..+. +..|++||+.+ +. ....+.
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 9999986532 234678999999998877664 56799999876 42 233333
Q ss_pred cCCcEEEEEEccCCCEEEEEcCC----CcEEEEeCCCCe
Q psy10953 127 HADQVWCVCVAPDGDKFVSVGED----KAVHMYSYKPEE 161 (181)
Q Consensus 127 ~~~~v~~~~~sp~g~~l~~~~~d----~~v~i~~~~~~~ 161 (181)
+...+.. .++|+|+.|+..+.. ..|.+|++..+.
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 4444443 588999988766643 368999987653
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=7.5e-13 Score=100.26 Aligned_cols=146 Identities=18% Similarity=0.291 Sum_probs=110.5
Q ss_pred eEEEEEEcC-CCCEEEEEe-CCCcEEEEeCCCCcEEEEEecCC----------ceEEEEEECCC-CCEEEEeeCCCcEEE
Q psy10953 13 DMWNVVFSP-DDKYVLSGS-QSGKINLYGVETGKLEQIFDTRG----------KFTLSIAYSTD-GHWIASGALDGIINI 79 (181)
Q Consensus 13 ~~~~~~~s~-~g~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~s~d-~~~l~~~~~d~~v~i 79 (181)
....++++| +|+++++.+ .++.|++|+ .+++....+...+ .....++++|+ +.++++...++.|.+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence 468999999 788888876 689999999 5677766664322 12568999999 677777778899999
Q ss_pred EeCCCC----------CcccEEEEEEcC------CCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccC
Q psy10953 80 FDANTG----------HSSWVLSTAFTR------DGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPD 139 (181)
Q Consensus 80 ~d~~~~----------~~~~v~~~~~s~------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~ 139 (181)
||..++ +...+..++|+| +|+.+++...+..|++||+.+++.+..+. +...+.+++++|+
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 223 FKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp EETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT
T ss_pred EECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC
Confidence 998743 234577888999 33333333344589999999988877763 4456899999999
Q ss_pred CCEEEEEcCCCcEEEEeCCC
Q psy10953 140 GDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 140 g~~l~~~~~d~~v~i~~~~~ 159 (181)
|+.+++...++.|++|+...
T Consensus 303 G~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 303 GTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SEEEEEESSSCCEEEEEEEE
T ss_pred CCEEEEECCCCEEEEEeCCc
Confidence 98888888899999999753
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.52 E-value=6.9e-13 Score=101.73 Aligned_cols=154 Identities=16% Similarity=0.173 Sum_probs=102.5
Q ss_pred cCeeeEEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCC-----C
Q psy10953 9 VGPVDMWNVVFSP-DDKYVLSGSQS------GKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALD-----G 75 (181)
Q Consensus 9 ~~~~~~~~~~~s~-~g~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d-----~ 75 (181)
.+...+..++|+| +|++|+..+.+ ..|.+||+.+++...+.... ...+..+.|+|||++|+.++.+ +
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccc
Confidence 3444577899999 88877766543 46888998777655444322 3345678999999988776543 4
Q ss_pred cEEEEeCCCCCcccE-----EEEEEcC-CCCEEEEEe----------------CCCcEEEEecCCCceeeeeecCC----
Q psy10953 76 IINIFDANTGHSSWV-----LSTAFTR-DGKFFISAS----------------ADHTVRVWNFARRENMHTFKHAD---- 129 (181)
Q Consensus 76 ~v~i~d~~~~~~~~v-----~~~~~s~-~~~~l~~~~----------------~d~~i~v~d~~~~~~~~~~~~~~---- 129 (181)
.+++||+.++....+ ..+.|+| +|+++++++ .+..|++||+.+++......+..
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~ 344 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDV 344 (396)
T ss_dssp EEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCC
T ss_pred eEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccc
Confidence 499999976542211 1278999 999888754 24689999998776433223333
Q ss_pred -------cEEEEEEccCCCEEEEEcC-CCcEEEE--eCCCCee
Q psy10953 130 -------QVWCVCVAPDGDKFVSVGE-DKAVHMY--SYKPEEE 162 (181)
Q Consensus 130 -------~v~~~~~sp~g~~l~~~~~-d~~v~i~--~~~~~~~ 162 (181)
.+..++|+|+|+.|+.++. ++...+| ++..+..
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred ccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 2556789999999887765 4554554 4444433
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=1.1e-11 Score=91.58 Aligned_cols=149 Identities=14% Similarity=0.273 Sum_probs=112.0
Q ss_pred eeEEEEEE-cCCCCEEEEEeC-CCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----
Q psy10953 12 VDMWNVVF-SPDDKYVLSGSQ-SGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALDGIINIFDANT---- 84 (181)
Q Consensus 12 ~~~~~~~~-s~~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~---- 84 (181)
..+..+++ .++|+++++... ++.|.+|| .+++....+... ......++++++|+.+++...++.|.+||...
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~ 155 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH 155 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE
Confidence 34678999 577776666643 88999999 567766655432 23456899999999888777788999999653
Q ss_pred -----CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC---CcEEEEEEccCCCEEEEEcCCC-cEEEE
Q psy10953 85 -----GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA---DQVWCVCVAPDGDKFVSVGEDK-AVHMY 155 (181)
Q Consensus 85 -----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d~-~v~i~ 155 (181)
.+...+..++++|+|+++++...++.|++||.. +..+..+... ..+.+++++|+|+.+++...++ .|.+|
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp EEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 223457899999999988888888999999974 3444455322 4688999999999888888776 99999
Q ss_pred eCCCCeeE
Q psy10953 156 SYKPEEEV 163 (181)
Q Consensus 156 ~~~~~~~~ 163 (181)
+.. ++.+
T Consensus 235 ~~~-g~~~ 241 (286)
T 1q7f_A 235 TQD-GQLI 241 (286)
T ss_dssp CTT-SCEE
T ss_pred CCC-CCEE
Confidence 964 4433
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.50 E-value=1.2e-13 Score=106.06 Aligned_cols=149 Identities=13% Similarity=0.092 Sum_probs=106.3
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEE-------------------EEECCCCCEEEEe-----e
Q psy10953 17 VVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLS-------------------IAYSTDGHWIASG-----A 72 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-------------------~~~s~d~~~l~~~-----~ 72 (181)
+.|+|||++|+.++.++.|++||+.+++...+...+...... ..++|+++.++.. .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 779999999999999999999999998877666544333222 3568888877654 4
Q ss_pred CCCcEEEEeCCCCCc-------ccEEEEEEcC-CCCEEEEEeCC------CcEEEEecCCCceeeeeec--CCcEEEEEE
Q psy10953 73 LDGIINIFDANTGHS-------SWVLSTAFTR-DGKFFISASAD------HTVRVWNFARRENMHTFKH--ADQVWCVCV 136 (181)
Q Consensus 73 ~d~~v~i~d~~~~~~-------~~v~~~~~s~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~--~~~v~~~~~ 136 (181)
.+..+++||+.++.. ..+..+.|+| +++.++..+.+ ..|.+||+..+.......+ ...+..++|
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFW 245 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEE
Confidence 567899999876542 3467789999 78876665543 3688888866543322222 225778999
Q ss_pred ccCCCEEEEEcCC-----CcEEEEeCCCCeeEEE
Q psy10953 137 APDGDKFVSVGED-----KAVHMYSYKPEEEVEV 165 (181)
Q Consensus 137 sp~g~~l~~~~~d-----~~v~i~~~~~~~~~~~ 165 (181)
+|||++|+.++.+ +.|++|++.+++...+
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (396)
T 3c5m_A 246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEV 279 (396)
T ss_dssp CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE
T ss_pred CCCCCEEEEEecCCCCccceEEEEECCCCCeEEe
Confidence 9999988777543 3499999987765443
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=7e-13 Score=109.80 Aligned_cols=147 Identities=15% Similarity=0.094 Sum_probs=102.5
Q ss_pred eEEEEEEcCCCCEEEE-----EeCCCcEEEEeCCCCcEE-EEEecCCceEEEEEECCCCCEEEEeeCCCc----------
Q psy10953 13 DMWNVVFSPDDKYVLS-----GSQSGKINLYGVETGKLE-QIFDTRGKFTLSIAYSTDGHWIASGALDGI---------- 76 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~-----~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~---------- 76 (181)
.+..++|||||++||. |+.+.+|++||+.+++.. ......... ..++|+|||+.|++++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 5788999999999983 444578999999999865 211111111 36899999999999988765
Q ss_pred ---EEEEeCCCCC------------cccEEEEEEcCCCCEEEEEeCCC----cEEEEecCCCceeeeeecCCcEEEEEEc
Q psy10953 77 ---INIFDANTGH------------SSWVLSTAFTRDGKFFISASADH----TVRVWNFARRENMHTFKHADQVWCVCVA 137 (181)
Q Consensus 77 ---v~i~d~~~~~------------~~~v~~~~~s~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~v~~~~~s 137 (181)
|++|++.++. ...+..+.|||+|++|+..+.++ .|+++|..++.......+...+....+
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~- 279 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA- 279 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-
Confidence 9999986532 24677899999999888777655 677777655543333344455555555
Q ss_pred cCCCEEEEEc---CCCcEEEEeCCCCe
Q psy10953 138 PDGDKFVSVG---EDKAVHMYSYKPEE 161 (181)
Q Consensus 138 p~g~~l~~~~---~d~~v~i~~~~~~~ 161 (181)
++|++++... .++.|.+|++.+++
T Consensus 280 ~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 280 WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 6777444433 24789999987654
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=4.4e-12 Score=95.92 Aligned_cols=145 Identities=16% Similarity=0.260 Sum_probs=97.4
Q ss_pred eEEEEEEcCCCCEEEEEeCC---C--cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC-------------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS---G--KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD------------- 74 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d---~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d------------- 74 (181)
.+..++|||||++|+.++.+ + .|.+|++.+++...+..... +..+.|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 45779999999999887654 2 38888998888776665443 6789999999999887642
Q ss_pred --------------CcEEEEeCCCCCc-c-----cEEEEEEcCCCCEEEEEeCCC-------cEEEEecCCCceeeeeec
Q psy10953 75 --------------GIINIFDANTGHS-S-----WVLSTAFTRDGKFFISASADH-------TVRVWNFARRENMHTFKH 127 (181)
Q Consensus 75 --------------~~v~i~d~~~~~~-~-----~v~~~~~s~~~~~l~~~~~d~-------~i~v~d~~~~~~~~~~~~ 127 (181)
..+++||+.++.. . .+..++|+|+| +++++..+. ...+|.+.+++......+
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~ 216 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK 216 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC
Confidence 5788999876543 2 34467899999 777776542 334443334433222233
Q ss_pred CCcEEEEEEccCCCEEEEEcCC--------CcEEEEeCCCCeeEEE
Q psy10953 128 ADQVWCVCVAPDGDKFVSVGED--------KAVHMYSYKPEEEVEV 165 (181)
Q Consensus 128 ~~~v~~~~~sp~g~~l~~~~~d--------~~v~i~~~~~~~~~~~ 165 (181)
..+..+ +|||+.|+.++.+ ..|.+|+ +++...+
T Consensus 217 -~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 217 -VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp -ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred -cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 344443 9999998877744 3577777 4444333
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=7.2e-12 Score=92.94 Aligned_cols=150 Identities=12% Similarity=0.097 Sum_probs=118.6
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeC-CCcEEEEeCCCC-----
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGAL-DGIINIFDANTG----- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~-d~~v~i~d~~~~----- 85 (181)
.+.+++++|+|++++ +.++.|..||. +++.+..+... ...+.++.+.++|+++++.+. ++.+..+|....
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~ 114 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKT 114 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE
T ss_pred CCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE
Confidence 467889999999888 34788999998 89888777654 245668899999999998776 777777775321
Q ss_pred --------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 --------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 --------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
+......+++.++|+++++...++.|..||.. ++.+.++.....+.++.+.++|+.+++++.++.|..++.
T Consensus 115 ~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 115 EFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp EECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred eccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 11123345678999999999999999999998 888888876667778889999999998888889999999
Q ss_pred CCCeeEEEc
Q psy10953 158 KPEEEVEVN 166 (181)
Q Consensus 158 ~~~~~~~~~ 166 (181)
.+++.+-..
T Consensus 194 ~tG~~~w~~ 202 (276)
T 3no2_A 194 ESNRIVRRV 202 (276)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEe
Confidence 878776433
No 182
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.45 E-value=5.4e-11 Score=91.87 Aligned_cols=149 Identities=11% Similarity=0.090 Sum_probs=108.2
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEeCCCCcEEEEEecC-------CceEEEEEECCCCCEEEEeeC--CCc
Q psy10953 16 NVVFSPDDKYVLSGS----------QSGKINLYGVETGKLEQIFDTR-------GKFTLSIAYSTDGHWIASGAL--DGI 76 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~s~d~~~l~~~~~--d~~ 76 (181)
.+++||||+++++++ .++.|.+||..+.+....+... +.....+.++|||++|+.++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998886 3678999999988887766543 122347899999999988764 467
Q ss_pred EEEEeCCCCCcccE------------------------------------------------------------------
Q psy10953 77 INIFDANTGHSSWV------------------------------------------------------------------ 90 (181)
Q Consensus 77 v~i~d~~~~~~~~v------------------------------------------------------------------ 90 (181)
|.++| .++.....
T Consensus 150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV 228 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence 88888 54210000
Q ss_pred -----------------------------------------EEEEEcCCCCEEEEEeC----------CCcEEEEecCCC
Q psy10953 91 -----------------------------------------LSTAFTRDGKFFISASA----------DHTVRVWNFARR 119 (181)
Q Consensus 91 -----------------------------------------~~~~~s~~~~~l~~~~~----------d~~i~v~d~~~~ 119 (181)
..++++|+++.+..... .+.|.++|+.++
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 00344555554443332 246888888888
Q ss_pred ceeeeeecCCcEEEEEEccCCC-EEEEEc-CCCcEEEEeCCCCeeEEE
Q psy10953 120 ENMHTFKHADQVWCVCVAPDGD-KFVSVG-EDKAVHMYSYKPEEEVEV 165 (181)
Q Consensus 120 ~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~d~~v~i~~~~~~~~~~~ 165 (181)
+.+..+......++++|+|||+ .++++. .++.|.+||..+++.+..
T Consensus 309 ~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 309 QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 8888887666789999999999 777776 489999999999888765
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.45 E-value=7.8e-12 Score=91.37 Aligned_cols=151 Identities=8% Similarity=0.016 Sum_probs=112.3
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG------ 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~------ 85 (181)
..+..++++|+|+++++...++.|..|+..+...............+++++++|+.+++...++.|.+||....
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~ 187 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP 187 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec
Confidence 45689999999997777777889999976554433221112123457899999997777777889999998643
Q ss_pred --CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee-ecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 86 --HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF-KHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 86 --~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
....+..++++++|+++++...++.|.+||.......... .....+.+++++|+|+.+++...++.|++++....+.
T Consensus 188 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 188 FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 1245788999999988888877889999998765433221 1235689999999999888888899999999876543
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=5.2e-11 Score=88.44 Aligned_cols=153 Identities=14% Similarity=0.151 Sum_probs=108.1
Q ss_pred ccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC----ceEEEEEECCCCCEEEE----ee-------
Q psy10953 8 NVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG----KFTLSIAYSTDGHWIAS----GA------- 72 (181)
Q Consensus 8 ~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~s~d~~~l~~----~~------- 72 (181)
......+..++++|+|+++++...++.|.+||..+++......... ..+..++++|+|+++++ +.
T Consensus 65 ~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 65 MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 3344457899999999988887778899999998888765443211 12346899999998886 32
Q ss_pred ------CCCcEEEEeCCC------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecC-CCce---eeeee-cCCcEEEEE
Q psy10953 73 ------LDGIINIFDANT------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFA-RREN---MHTFK-HADQVWCVC 135 (181)
Q Consensus 73 ------~d~~v~i~d~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~-~~~~---~~~~~-~~~~v~~~~ 135 (181)
..+.+..++... .....+..++|+|+|+.+++.+.++.|++||+. ++.. ...+. ....+.+++
T Consensus 145 ~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~ 224 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLR 224 (296)
T ss_dssp CCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEE
T ss_pred cccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEE
Confidence 134666676641 123456889999999988777778899999986 3333 12221 334567899
Q ss_pred EccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 136 VAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 136 ~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
++++|+.+++. ++.|.+|+.. ++.+
T Consensus 225 ~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 225 VDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp EBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred ECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 99999877666 7899999986 4444
No 185
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.43 E-value=4.8e-12 Score=98.02 Aligned_cols=136 Identities=10% Similarity=0.131 Sum_probs=104.4
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---------EE--EEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGK---------LE--QIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~---------~~--~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
.+..+++++...++++|+.+ .+++|+++..+ .. ..... .. +..++| |+++|+++ .++.+++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~l-p~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEI-PD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEEC-TT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeC-CC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 47889999999999999988 55569865333 11 22332 33 778999 99999988 889999999
Q ss_pred CCCC--------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 82 ANTG--------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 82 ~~~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
+... +...+..+.+.+. .++.++.||.+++||++++.... +...|.+++|||+| ++.|..||.++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 8643 2334666666654 28888999999999999776542 34579999999999 67789999999
Q ss_pred EEeCCCCe
Q psy10953 154 MYSYKPEE 161 (181)
Q Consensus 154 i~~~~~~~ 161 (181)
+|+...++
T Consensus 186 ~~~~~~~~ 193 (388)
T 1xip_A 186 SFAWRNGE 193 (388)
T ss_dssp EEEEETTE
T ss_pred EEcCCCcc
Confidence 99887666
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.42 E-value=3.7e-11 Score=91.02 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=108.2
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC-----ceEEEEEECCCCCEEEEee--CCCcEEEEeCCC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG-----KFTLSIAYSTDGHWIASGA--LDGIINIFDANT 84 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~s~d~~~l~~~~--~d~~v~i~d~~~ 84 (181)
.....++++++|+..++...++.|.+||..+++....+.... .....+++ ++..++.+. .++.|.++|+.+
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC
Confidence 456889999999544454489999999999999887665433 02335666 444455444 488999999976
Q ss_pred CCc-------ccEEEEEEcCCCCEEEEEeCC----------CcEEEEecCCCceeeeeec--CCcEEEEEEccCCCEEEE
Q psy10953 85 GHS-------SWVLSTAFTRDGKFFISASAD----------HTVRVWNFARRENMHTFKH--ADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 85 ~~~-------~~v~~~~~s~~~~~l~~~~~d----------~~i~v~d~~~~~~~~~~~~--~~~v~~~~~sp~g~~l~~ 145 (181)
+.. .....++++|+|++++++..+ +.|+++|..+++....+.. ...++.++++|+++++++
T Consensus 162 ~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 162 DKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp TEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred CeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 531 224567899999988777654 7899999998877666653 336889999999999988
Q ss_pred EcCCCcEEEEeCCCCee
Q psy10953 146 VGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 146 ~~~d~~v~i~~~~~~~~ 162 (181)
+.. .|.+||..+++.
T Consensus 242 ~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 242 INN--DIWRMPVEADRV 256 (328)
T ss_dssp ESS--SEEEEETTCSSC
T ss_pred Ecc--EEEEEECCCCce
Confidence 765 899999877653
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.42 E-value=2.2e-10 Score=92.94 Aligned_cols=157 Identities=13% Similarity=0.140 Sum_probs=116.6
Q ss_pred eeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCcEEEEEecCCceEEEEEEC----CCCCEEEEeeC-CCcEE
Q psy10953 6 KINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVE--TGKLEQIFDTRGKFTLSIAYS----TDGHWIASGAL-DGIIN 78 (181)
Q Consensus 6 ~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~s----~d~~~l~~~~~-d~~v~ 78 (181)
.+..+.. +..+.|||||+++++++.|+.|.+||+. +.+.+..+.... ....+.|+ |||+++++++. ++.+.
T Consensus 192 ~i~~g~~-p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 192 VLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp EEECSSC-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred EEeCCCC-ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 3444432 4589999999999999999999999995 777777665533 34689999 69999887665 58999
Q ss_pred EEeCCCCC-------------------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCcee--eeeecCCcEEEEEE
Q psy10953 79 IFDANTGH-------------------SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENM--HTFKHADQVWCVCV 136 (181)
Q Consensus 79 i~d~~~~~-------------------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~v~~~~~ 136 (181)
++|..+.+ ...+..+..++++. ++++...++.|.++|......+ ..+.......++.|
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~ 349 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGL 349 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceE
Confidence 99976432 11456677788765 5556666799999998775432 23344456778999
Q ss_pred ccCCCEEEEEc-CCCcEEEEeCCCCeeEE
Q psy10953 137 APDGDKFVSVG-EDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 137 sp~g~~l~~~~-~d~~v~i~~~~~~~~~~ 164 (181)
+|+|+++++++ .++.|.++|..+++.+.
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 99999987666 57899999999887654
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.40 E-value=2.4e-11 Score=90.08 Aligned_cols=141 Identities=12% Similarity=0.106 Sum_probs=107.6
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC-ceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--------CCcccEE
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG-KFTLSIAYSTDGHWIASGALDGIINIFDANT--------GHSSWVL 91 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~--------~~~~~v~ 91 (181)
..+++|++++.++.|.+||.++++.+..+..+. ..+.++.++|+|+.++ +.++.|..||... +....+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEECCTTCEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcCCCCcccc
Confidence 356889999999999999999999988877654 2345788999999888 4467788888721 1223567
Q ss_pred EEEEcCCCCEEEEEeC-CCcEEEEecCCCceeeeeec-------CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 92 STAFTRDGKFFISASA-DHTVRVWNFARRENMHTFKH-------ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 92 ~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~-------~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
.+++.|+|+.+++.+. ++.+..+|. +++.+..+.. ......+++.++|+++++...++.|..|+.. |+.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 8899999999998887 777888875 5666655531 1234566789999999999999999999987 6665
Q ss_pred EE
Q psy10953 164 EV 165 (181)
Q Consensus 164 ~~ 165 (181)
-.
T Consensus 159 w~ 160 (276)
T 3no2_A 159 NS 160 (276)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=4.7e-10 Score=84.41 Aligned_cols=153 Identities=10% Similarity=0.137 Sum_probs=107.9
Q ss_pred eeeEEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCcEEEEEe--cCCceEEEEEECCCCCEEEEeeC------CCcEE
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQS----GKINLYGVETGKLEQIFD--TRGKFTLSIAYSTDGHWIASGAL------DGIIN 78 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d----~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~s~d~~~l~~~~~------d~~v~ 78 (181)
...+.+++++|+|++++++..+ +.|.+||.++++....+. .....+..+.++|+|+.+++... .+.+.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 3457899999999988777666 689999998887654443 12345678999999987776543 35677
Q ss_pred EEeCCCCCc-------ccEEEEEEcCCCCEE-EEEeCCCcEEEEecCC-Cceeee-----e-ec--CCcEEEEEEccCCC
Q psy10953 79 IFDANTGHS-------SWVLSTAFTRDGKFF-ISASADHTVRVWNFAR-RENMHT-----F-KH--ADQVWCVCVAPDGD 141 (181)
Q Consensus 79 i~d~~~~~~-------~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~-~~~~~~-----~-~~--~~~v~~~~~sp~g~ 141 (181)
.+|..++.. ..+..++|+|+|+.+ ++.+.++.|++||+.. +..+.. . .. ...+.+++++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~ 245 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN 245 (333)
T ss_dssp EECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC
T ss_pred EEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC
Confidence 777654321 246788999999854 5555678999999864 222211 1 11 13678899999999
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 142 KFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
.+++...++.|.+|+.. ++.+.
T Consensus 246 l~v~~~~~~~v~~~d~~-g~~~~ 267 (333)
T 2dg1_A 246 LYVAMYGQGRVLVFNKR-GYPIG 267 (333)
T ss_dssp EEEEEETTTEEEEECTT-SCEEE
T ss_pred EEEEEcCCCEEEEECCC-CCEEE
Confidence 88887778899999984 44443
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=5.7e-11 Score=99.08 Aligned_cols=145 Identities=15% Similarity=0.134 Sum_probs=102.1
Q ss_pred eEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCc-----------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGI----------- 76 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~----------- 76 (181)
.+..++|||||++|+.+..+ .+|++||+.+++....... ......++|+|| +.|+.+..++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~-~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK-WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE-EEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC-CceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 56789999999999877654 4699999999987654211 111136889999 99988876553
Q ss_pred ---EEEEeCCCCC------------cccEEEEEEcCCCCEEEEEeCCC-----cEEEEecCCC--ceeeee-ecCCcEEE
Q psy10953 77 ---INIFDANTGH------------SSWVLSTAFTRDGKFFISASADH-----TVRVWNFARR--ENMHTF-KHADQVWC 133 (181)
Q Consensus 77 ---v~i~d~~~~~------------~~~v~~~~~s~~~~~l~~~~~d~-----~i~v~d~~~~--~~~~~~-~~~~~v~~ 133 (181)
|++|++.++. ...+..+.|||||++++..+.++ .|++||+.++ .....+ .+......
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 8899875431 12477899999999887776443 7999999776 313333 33334444
Q ss_pred EEEccCCCEEEEEcCC----CcEEEEeCCCC
Q psy10953 134 VCVAPDGDKFVSVGED----KAVHMYSYKPE 160 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d----~~v~i~~~~~~ 160 (181)
. ++|+|+.|+..+.+ ..|.+|++..+
T Consensus 322 ~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 4 35899988877753 45999998764
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.38 E-value=6.7e-11 Score=86.34 Aligned_cols=150 Identities=8% Similarity=0.063 Sum_probs=110.0
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH----- 86 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~----- 86 (181)
..+.+++++++|+++++.. ++.|..||..+................++++++|+.+++...++.+.+|+..+..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~ 145 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP 145 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec
Confidence 3467899999999666655 8899999987665433221222345689999999977777778899999764321
Q ss_pred ---cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 87 ---SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 87 ---~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
...+..++++|+|+++++...++.|.+||........... ....+.+++++++|+.+++...++.|.+|+......
T Consensus 146 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 146 FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 1246788999999988877778899999987765433222 225688999999998888777788999999865543
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.37 E-value=8.3e-11 Score=97.58 Aligned_cols=150 Identities=11% Similarity=0.063 Sum_probs=103.5
Q ss_pred eEEEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCcEE--EEEec--CCceEEEEEECCCCCEEEEee
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGK----------------INLYGVETGKLE--QIFDT--RGKFTLSIAYSTDGHWIASGA 72 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~----------------i~~~d~~~~~~~--~~~~~--~~~~~~~~~~s~d~~~l~~~~ 72 (181)
.+..++|+|||+.|+.++.++. |++|++.+++.. .++.. +......+.|||||++|+..+
T Consensus 172 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 172 KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 3567999999999999888766 999999887632 22232 233456899999999998765
Q ss_pred C-----CCcEEEEeCCC------CC---------cccEEEEEEcCCCCEEEEEeCC----CcEEEEecCCCce---eeee
Q psy10953 73 L-----DGIINIFDANT------GH---------SSWVLSTAFTRDGKFFISASAD----HTVRVWNFARREN---MHTF 125 (181)
Q Consensus 73 ~-----d~~v~i~d~~~------~~---------~~~v~~~~~s~~~~~l~~~~~d----~~i~v~d~~~~~~---~~~~ 125 (181)
. +..+++||+.+ +. ...+.. .|+|+|+.|+..+.. ..|.+||+.++.. ...+
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 4 67899999865 31 112222 488999877665543 3699999987631 2223
Q ss_pred ecCC--cEEEEEEccCCCEEEEEcCCCc--EEEEeCCCCeeE
Q psy10953 126 KHAD--QVWCVCVAPDGDKFVSVGEDKA--VHMYSYKPEEEV 163 (181)
Q Consensus 126 ~~~~--~v~~~~~sp~g~~l~~~~~d~~--v~i~~~~~~~~~ 163 (181)
.+.. .+..+++++++.++++...++. |.+|++.++..+
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~ 372 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL 372 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE
Confidence 3433 5778899888778888887874 566676555543
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.36 E-value=3.7e-11 Score=99.49 Aligned_cols=146 Identities=15% Similarity=0.079 Sum_probs=100.7
Q ss_pred cCCCCEEEEEeCCC---c--EEEEeCCCCcEEEEEec------CCceEEEEEECCCCCEEEE-----eeCCCcEEEEeCC
Q psy10953 20 SPDDKYVLSGSQSG---K--INLYGVETGKLEQIFDT------RGKFTLSIAYSTDGHWIAS-----GALDGIINIFDAN 83 (181)
Q Consensus 20 s~~g~~l~~~~~d~---~--i~~~d~~~~~~~~~~~~------~~~~~~~~~~s~d~~~l~~-----~~~d~~v~i~d~~ 83 (181)
+|+|++++....++ . +...+...++...++.. +...+..++|||||++|+. |+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 48999988766544 2 44445555655455432 1224668999999999984 3345689999997
Q ss_pred CCCcc------cE--EEEEEcCCCCEEEEEeCCCc-------------EEEEecCCCce--eeeee---cCCcEEEEEEc
Q psy10953 84 TGHSS------WV--LSTAFTRDGKFFISASADHT-------------VRVWNFARREN--MHTFK---HADQVWCVCVA 137 (181)
Q Consensus 84 ~~~~~------~v--~~~~~s~~~~~l~~~~~d~~-------------i~v~d~~~~~~--~~~~~---~~~~v~~~~~s 137 (181)
++... .+ ..++|+|||+.|+.++.+.. |++|++.++.. ...+. +...+.++++|
T Consensus 156 tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 156 SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 65422 12 57899999999999988766 99999987652 22222 33568899999
Q ss_pred cCCCEEEEEcCCC----cEEEEeCCCCeeEEE
Q psy10953 138 PDGDKFVSVGEDK----AVHMYSYKPEEEVEV 165 (181)
Q Consensus 138 p~g~~l~~~~~d~----~v~i~~~~~~~~~~~ 165 (181)
|||++|+..+.++ .|++++...++...+
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEe
Confidence 9999998877655 677776655444333
No 194
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=1e-10 Score=90.58 Aligned_cols=127 Identities=13% Similarity=0.086 Sum_probs=98.9
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC----ccc
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH----SSW 89 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~----~~~ 89 (181)
+..++| |+++|+++ .++.|++||+++-........+...+.++.+.+. .++++..||.+.+||+..+. ...
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~~~~ 164 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQN 164 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEES
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccccCC
Confidence 899999 99999998 8899999999766544444344444556666543 38889999999999998654 346
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEecCCCce--eeee------e----cCCcEEEEEEccCCCEEEEEc
Q psy10953 90 VLSTAFTRDGKFFISASADHTVRVWNFARREN--MHTF------K----HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~------~----~~~~v~~~~~sp~g~~l~~~~ 147 (181)
|.+++|||+| ++.+..||++++|+...... ..++ . +...|.+++|.++++++++-.
T Consensus 165 Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 165 VTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred ceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 8999999999 57788999999998877653 3344 1 456799999999999988755
No 195
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.35 E-value=1.1e-10 Score=89.65 Aligned_cols=136 Identities=18% Similarity=0.305 Sum_probs=102.5
Q ss_pred CCCCEEEEEe------CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEeCCC
Q psy10953 21 PDDKYVLSGS------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFDANT 84 (181)
Q Consensus 21 ~~g~~l~~~~------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d~~~ 84 (181)
++++++++.. .|++|.+||..+++.+..+..... . .+.++|||+++++++ .++.|.+||+.+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4777776654 367999999999998877665433 3 799999999998876 367899999875
Q ss_pred CCc--------------ccEEEEEEcCCCCEEEEEeC--CCcEEEEecCCCceeee-eecCCcEEEEEEccCC-CEEEEE
Q psy10953 85 GHS--------------SWVLSTAFTRDGKFFISASA--DHTVRVWNFARRENMHT-FKHADQVWCVCVAPDG-DKFVSV 146 (181)
Q Consensus 85 ~~~--------------~~v~~~~~s~~~~~l~~~~~--d~~i~v~d~~~~~~~~~-~~~~~~v~~~~~sp~g-~~l~~~ 146 (181)
... .....++++|+|++|+++.. ++.|.+||+.+++.+.. +..... +.+.+.|++ ..+++.
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTI 169 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEE
Confidence 432 12345799999999888764 57899999999988777 665443 445677876 567778
Q ss_pred cCCCcEEEEeCCC
Q psy10953 147 GEDKAVHMYSYKP 159 (181)
Q Consensus 147 ~~d~~v~i~~~~~ 159 (181)
+.|+.+.+|++..
T Consensus 170 ~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 170 CGDGGLLTINLGE 182 (361)
T ss_dssp ETTSSEEEEEECT
T ss_pred CCCCcEEEEEECC
Confidence 8888888888765
No 196
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.33 E-value=4.2e-11 Score=92.30 Aligned_cols=164 Identities=7% Similarity=-0.014 Sum_probs=117.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCcEEEEEecC-------CceEEEEEECCCCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGS----------QSGKINLYGVETGKLEQIFDTR-------GKFTLSIAYSTDGH 66 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~s~d~~ 66 (181)
+..+..+... .+.++|||+++++++ .+++|.+||..+++....+... +.....+.++|||+
T Consensus 59 ~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk 136 (368)
T 1mda_H 59 LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA 136 (368)
T ss_dssp EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS
T ss_pred EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 3444444443 799999999998886 3688999999999998887643 12234688999999
Q ss_pred EEEEeeC--CCcEEE--EeCCC------C---------------------------Cc----------------------
Q psy10953 67 WIASGAL--DGIINI--FDANT------G---------------------------HS---------------------- 87 (181)
Q Consensus 67 ~l~~~~~--d~~v~i--~d~~~------~---------------------------~~---------------------- 87 (181)
+++.+.. .+.+.+ +|+.+ + ..
T Consensus 137 ~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 137 CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp CEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred EEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 9888764 356777 66521 0 00
Q ss_pred --------------c------------cE------------------E---EEEEcCCCCEEEEEeC---------CCcE
Q psy10953 88 --------------S------------WV------------------L---STAFTRDGKFFISASA---------DHTV 111 (181)
Q Consensus 88 --------------~------------~v------------------~---~~~~s~~~~~l~~~~~---------d~~i 111 (181)
+ .+ . .++++|+++.+..+.. +..+
T Consensus 217 ~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 217 AQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp EEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred cccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 0 00 0 0568888876665432 2356
Q ss_pred EEEecCCCceeeeeecCCcEEEEEEccCCCE-EEEEc-CCCcEEEEeCCCCeeEEEcCCC
Q psy10953 112 RVWNFARRENMHTFKHADQVWCVCVAPDGDK-FVSVG-EDKAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 112 ~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~-l~~~~-~d~~v~i~~~~~~~~~~~~~~~ 169 (181)
.++|+.+.+.+..+.-....++++|+|||++ +++.. .++.|.++|..+++.+....-|
T Consensus 297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred EEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC
Confidence 6999999998888876667999999999984 56666 5899999999999888765544
No 197
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.33 E-value=5.4e-11 Score=93.26 Aligned_cols=161 Identities=14% Similarity=0.165 Sum_probs=111.7
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCcEEEEEecC-------CceEEEEEECCCCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGS----------QSGKINLYGVETGKLEQIFDTR-------GKFTLSIAYSTDGH 66 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~s~d~~ 66 (181)
+..+..+... .+++||||+++++++ .++.|.++|..+++....+... +.....+.++|||+
T Consensus 112 v~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk 189 (426)
T 3c75_H 112 LGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK 189 (426)
T ss_dssp EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS
T ss_pred EEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 3444445443 899999999998776 3678999999999988776542 11223678999999
Q ss_pred EEEEeeC--CCcEEEEeCCCCCcc------------------------------------cEE-----------------
Q psy10953 67 WIASGAL--DGIINIFDANTGHSS------------------------------------WVL----------------- 91 (181)
Q Consensus 67 ~l~~~~~--d~~v~i~d~~~~~~~------------------------------------~v~----------------- 91 (181)
+++.+.. ++.|.+.|+.+.... .+.
T Consensus 190 ~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~ 269 (426)
T 3c75_H 190 NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINH 269 (426)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSC
T ss_pred EEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeE
Confidence 9988764 578888887532100 000
Q ss_pred -----------------------------------------------------EEEEcCCCCEEEEEeC----------C
Q psy10953 92 -----------------------------------------------------STAFTRDGKFFISASA----------D 108 (181)
Q Consensus 92 -----------------------------------------------------~~~~s~~~~~l~~~~~----------d 108 (181)
.++++|+++.+..... .
T Consensus 270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 0344455443333221 2
Q ss_pred CcEEEEecCCCceeeeeecCCcEEEEEEccCCC-EEEEEc-CCCcEEEEeCCCCeeEEEc
Q psy10953 109 HTVRVWNFARRENMHTFKHADQVWCVCVAPDGD-KFVSVG-EDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 109 ~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~d~~v~i~~~~~~~~~~~~ 166 (181)
+.|.++|+.+.+.+..+.-....++++|+|||+ ++++.. .++.|.++|..+++.+...
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 357777777777777776555688999999999 887777 5899999999999888653
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.30 E-value=1.8e-10 Score=87.17 Aligned_cols=147 Identities=9% Similarity=-0.069 Sum_probs=107.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc------
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS------ 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~------ 87 (181)
...+++. +++..++...+++|.+||..+++.+..+.. ......++++++++.+++...++.|.+||+.++..
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc
Confidence 3566664 455556666789999999999999877753 33456889989985444444789999999875421
Q ss_pred -c------cEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC----------
Q psy10953 88 -S------WVLSTAFTRDGKFFISAS-ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED---------- 149 (181)
Q Consensus 88 -~------~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d---------- 149 (181)
. .+..+++ .+++.+++.. .++.|.++|+.+++....+........++++|+|++++++..+
T Consensus 124 g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp TTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred CCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCC
Confidence 1 3445666 4455555554 4889999999998877777655567789999999877766654
Q ss_pred CcEEEEeCCCCeeE
Q psy10953 150 KAVHMYSYKPEEEV 163 (181)
Q Consensus 150 ~~v~i~~~~~~~~~ 163 (181)
+.|.++|..+++..
T Consensus 203 ~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 203 PSLYRIDAETFTVE 216 (328)
T ss_dssp CEEEEEETTTTEEE
T ss_pred ceEEEEECCCCeEE
Confidence 78999999887654
No 199
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=4.5e-10 Score=83.99 Aligned_cols=154 Identities=11% Similarity=0.074 Sum_probs=107.8
Q ss_pred eeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
+..+...........|+|+|+ ++++...++.|..|+. +++.. .+......+..+.++++|+++++...++.|..|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~-~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVD-VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEE-EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEE-EEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 445555555567889999999 5677777899999987 45543 33344455678999999997776666678999987
Q ss_pred CCCC-----------cccEEEEEEcCCCCEEEE----EeC-------------CCcEEEEecCCCceeeeeecCCcEEEE
Q psy10953 83 NTGH-----------SSWVLSTAFTRDGKFFIS----ASA-------------DHTVRVWNFARRENMHTFKHADQVWCV 134 (181)
Q Consensus 83 ~~~~-----------~~~v~~~~~s~~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~v~~~ 134 (181)
.... ...+..++++|+|+++++ +.. .+.|+.||..+++..... .....+.+
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl 193 (305)
T 3dr2_A 115 DGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGL 193 (305)
T ss_dssp TSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEE
T ss_pred CCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcce
Confidence 5210 123456899999998886 332 246788887665533322 33457889
Q ss_pred EEccCCCEEEEEcCC------CcEEEEeCCCC
Q psy10953 135 CVAPDGDKFVSVGED------KAVHMYSYKPE 160 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d------~~v~i~~~~~~ 160 (181)
+|+||++.++.+... +.|.+|++..+
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 999999987776654 68999988654
No 200
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.28 E-value=5e-10 Score=84.58 Aligned_cols=144 Identities=14% Similarity=0.128 Sum_probs=95.9
Q ss_pred eEEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC--------CcE
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSG-------KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD--------GII 77 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~-------~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d--------~~v 77 (181)
.+..++|+||| +++++..+. ...+|.+.+++...+... ..... ++|||++|+.++.+ ..+
T Consensus 172 ~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~--~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 172 RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK--VSFYA--VDSDGERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE--ESEEE--EEECSSCEEEEECCSSSCCCSSCEE
T ss_pred CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC--cceee--ECCCCCEEEEEEccccCCccccceE
Confidence 56788999999 777776542 344554445655444433 33333 39999988877643 468
Q ss_pred EEEeCCC-------CCcccEEE-EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC
Q psy10953 78 NIFDANT-------GHSSWVLS-TAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED 149 (181)
Q Consensus 78 ~i~d~~~-------~~~~~v~~-~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 149 (181)
.+|| .. .+...+.. +.|+ ++ ++++++.++.+++| +.+++......+...+.+++++| +.+++++.+
T Consensus 247 ~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~ 320 (347)
T 2gop_A 247 YIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETA 320 (347)
T ss_dssp EEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECS
T ss_pred EEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCC
Confidence 8887 21 23345665 8999 88 88899999999999 87555444444566789999999 677777766
Q ss_pred CcE-EEEeCCCCeeEEEcCC
Q psy10953 150 KAV-HMYSYKPEEEVEVNGG 168 (181)
Q Consensus 150 ~~v-~i~~~~~~~~~~~~~~ 168 (181)
+.. .+|.+. ++...+...
T Consensus 321 ~~~~~l~~~~-g~~~~lt~~ 339 (347)
T 2gop_A 321 TRLRELFTWD-GEEKQLTDY 339 (347)
T ss_dssp SSCCEEEEES-SSEEECCCT
T ss_pred CChHHheEeC-CcEEEeccc
Confidence 544 777776 554444433
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.27 E-value=6.6e-09 Score=76.43 Aligned_cols=151 Identities=10% Similarity=0.102 Sum_probs=111.8
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE-ecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF-DTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
...+++++++++|++.++...++.|..||.. ++..... ......+..++++++|..+++...++.+..||....
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 3467999999999987777668899999988 6654432 123345678999999998877776888999987521
Q ss_pred ----CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-ee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 86 ----HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT-FK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 86 ----~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
....+..++++|+|+++++...++.|..||. +++.... .. ....+.+++++++|+.+++...++.|..|+. +
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 170 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S 170 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C
Confidence 2235788999999998888777889999998 4433221 12 2346889999999988887777789999998 5
Q ss_pred CeeEE
Q psy10953 160 EEEVE 164 (181)
Q Consensus 160 ~~~~~ 164 (181)
+....
T Consensus 171 g~~~~ 175 (299)
T 2z2n_A 171 GDITE 175 (299)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 54433
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=9.9e-10 Score=81.72 Aligned_cols=145 Identities=11% Similarity=0.170 Sum_probs=104.7
Q ss_pred eEEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCCCcEEEEEecCCceEEEEEEC----CCCCEEEEe-e
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS---------------GKINLYGVETGKLEQIFDTRGKFTLSIAYS----TDGHWIASG-A 72 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d---------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s----~d~~~l~~~-~ 72 (181)
.+.+++++|+|++.++...+ +.|..++.. ++......... ....++++ ++++.++.+ .
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ-FPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES-SEEEEEEEECTTSCEEEEEEEET
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC-CcceEEEecccCCCCCEEEEEEC
Confidence 36789999999987776655 567777765 66544433222 23578899 999766554 5
Q ss_pred CCCcEEEEeCC-CC-------------Cc-ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEE
Q psy10953 73 LDGIINIFDAN-TG-------------HS-SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCV 136 (181)
Q Consensus 73 ~d~~v~i~d~~-~~-------------~~-~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~ 136 (181)
.++.+.+||.. .+ +. ..+..++++++|+++++...++.|.+||..+++.+..+. +...+.++++
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~ 275 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF 275 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEE
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEE
Confidence 67889999864 21 11 456788999999998888788899999998666555554 3367899999
Q ss_pred ccCCCEEE-EEcCCCcEEEEeCCC
Q psy10953 137 APDGDKFV-SVGEDKAVHMYSYKP 159 (181)
Q Consensus 137 sp~g~~l~-~~~~d~~v~i~~~~~ 159 (181)
+|+|+.|+ +...++.|..|+...
T Consensus 276 ~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 276 KPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999555 445568899998764
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.23 E-value=3.2e-09 Score=86.21 Aligned_cols=139 Identities=17% Similarity=0.164 Sum_probs=106.4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--CCC-------cccEE
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN--TGH-------SSWVL 91 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~--~~~-------~~~v~ 91 (181)
|++..+++...+++|.++|..+++.+..+.... ....+.++|||+++++++.|+.|.+||+. +.. .....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 455566778889999999999999988776533 34589999999999999999999999995 332 12356
Q ss_pred EEEEc----CCCCEEEEEeC-CCcEEEEecCCCceeeeeec------------CCcEEEEEEccCCCEE-EEEcCCCcEE
Q psy10953 92 STAFT----RDGKFFISASA-DHTVRVWNFARRENMHTFKH------------ADQVWCVCVAPDGDKF-VSVGEDKAVH 153 (181)
Q Consensus 92 ~~~~s----~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~------------~~~v~~~~~sp~g~~l-~~~~~d~~v~ 153 (181)
.++|+ |+|+++++++. ++.+.++|..+.+.+..+.- ...+..+..++++..+ +.....+.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 88999 69997776664 68999999998887766541 1257788889886654 4455678999
Q ss_pred EEeCCCC
Q psy10953 154 MYSYKPE 160 (181)
Q Consensus 154 i~~~~~~ 160 (181)
++++...
T Consensus 324 ~vd~~~~ 330 (567)
T 1qks_A 324 LVDYTDL 330 (567)
T ss_dssp EEETTCS
T ss_pred EEecCCC
Confidence 9998654
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.21 E-value=2.2e-09 Score=83.06 Aligned_cols=139 Identities=17% Similarity=0.189 Sum_probs=100.9
Q ss_pred EEEcCCCCEEEEEeC-----CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEe
Q psy10953 17 VVFSPDDKYVLSGSQ-----SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFD 81 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d 81 (181)
....|+++++++... ++.|.++|..+++.+..+...... .+.++|||++++.++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345799999987765 679999999999998887754443 389999999887765 367899999
Q ss_pred CCCCCcc---------------cEEEEEEcCCCCEEEEEeC--CCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEE
Q psy10953 82 ANTGHSS---------------WVLSTAFTRDGKFFISASA--DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 82 ~~~~~~~---------------~v~~~~~s~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 144 (181)
..+.... ....++|+|||+++..+.. ++.|.++|+.+++.+.++..++. ...+....+.++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 9765421 2234799999998777764 68899999999998888865443 122222344555
Q ss_pred EEcCCCcEEEEeCCC
Q psy10953 145 SVGEDKAVHMYSYKP 159 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~ 159 (181)
+.+.||.+.+.++.+
T Consensus 194 ~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEETTSCEEEEECCS
T ss_pred EECCCCCEEEEECCC
Confidence 666666666666654
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=6.5e-09 Score=77.40 Aligned_cols=151 Identities=11% Similarity=0.111 Sum_probs=102.5
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC----CceEEEEEECCCCCEEEEeeC-----------CCc
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR----GKFTLSIAYSTDGHWIASGAL-----------DGI 76 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~s~d~~~l~~~~~-----------d~~ 76 (181)
..+.+++++|+|+++++. +..|.+||.++++........ ......+.++|+|+.+++... .+.
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 457889999999955543 568999999888776544332 223567899999997665432 234
Q ss_pred EEEEeCCCC------CcccEEEEEEcCCCCEE-EEEeCCCcEEEEec--CCCce-----eeeee-cCCcEEEEEEccCCC
Q psy10953 77 INIFDANTG------HSSWVLSTAFTRDGKFF-ISASADHTVRVWNF--ARREN-----MHTFK-HADQVWCVCVAPDGD 141 (181)
Q Consensus 77 v~i~d~~~~------~~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~--~~~~~-----~~~~~-~~~~v~~~~~sp~g~ 141 (181)
++.++.... .....+.++|+|+++.+ ++.+.++.|..||+ .++.. +..+. ....+.+++++++|+
T Consensus 132 l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp EEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred EEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 455554321 11235778999999855 55566788999987 34432 11222 235678999999998
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 142 KFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 142 ~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
..++...++.|.+|+..+++.+.
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEEE
T ss_pred EEEEEcCCCEEEEEcCCCceEEE
Confidence 88877777889999988665543
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.21 E-value=1.6e-08 Score=74.36 Aligned_cols=149 Identities=9% Similarity=0.057 Sum_probs=109.5
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE-ecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF-DTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG----- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~----- 85 (181)
..+..++++++|++.++...++.|..||.. ++..... ......+..+.++++|+.+++...++.+..||....
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~ 135 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYE 135 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEec
Confidence 457889999999988877778899999976 4443222 113345668999999998887777888999987321
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-ee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT-FK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
....+..++++++|+++++...++.|..||. +++.... .. ....+.+++++++|+.+++...++.|.+|+. ++
T Consensus 136 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 136 LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 2245788999999998887777789999998 5543322 12 2345889999999998777777889999998 55
Q ss_pred eeE
Q psy10953 161 EEV 163 (181)
Q Consensus 161 ~~~ 163 (181)
...
T Consensus 214 ~~~ 216 (299)
T 2z2n_A 214 EIT 216 (299)
T ss_dssp CEE
T ss_pred cEE
Confidence 433
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=3.3e-09 Score=82.82 Aligned_cols=145 Identities=12% Similarity=0.142 Sum_probs=103.7
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC--cEEEEeCCCC-----
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG--IINIFDANTG----- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~--~v~i~d~~~~----- 85 (181)
..+.++|+|+|+++++...++.|+.||..++++......... .. ++|+++++.|+.+..++ .+.+++...+
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 468999999999888877789999999998887766554333 33 89999999888887765 7888886532
Q ss_pred -------CcccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeee----ee-cCC-cEE-EEEEccC-CCEEEEEcCC
Q psy10953 86 -------HSSWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHT----FK-HAD-QVW-CVCVAPD-GDKFVSVGED 149 (181)
Q Consensus 86 -------~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~----~~-~~~-~v~-~~~~sp~-g~~l~~~~~d 149 (181)
....+.+++++| +|.+++ +..++.|+.||..++..... .. ... ... .++|+|+ ++.+++-..+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 223456789999 555555 66688999999987653221 11 111 123 8999995 5555666667
Q ss_pred CcEEEEeCCCC
Q psy10953 150 KAVHMYSYKPE 160 (181)
Q Consensus 150 ~~v~i~~~~~~ 160 (181)
+.|+.|+....
T Consensus 289 ~~I~~~~~~g~ 299 (409)
T 3hrp_A 289 SSVYKITPDGE 299 (409)
T ss_dssp TEEEEECTTCC
T ss_pred CEEEEEecCCC
Confidence 89999987654
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=3.7e-09 Score=82.54 Aligned_cols=149 Identities=13% Similarity=0.057 Sum_probs=104.4
Q ss_pred EEEcCCCCEEEEEeCCC--cEEEEeCCCCcEEEEE----ecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcc--
Q psy10953 17 VVFSPDDKYVLSGSQSG--KINLYGVETGKLEQIF----DTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSS-- 88 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~--~i~~~d~~~~~~~~~~----~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~-- 88 (181)
++|+|+++.|+++..++ .|..++..++.....+ ........+++++|++..|+....++.|+.||...+...
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999998888766 7888888766543333 112233457899995555555777889999998644211
Q ss_pred ----------cE-E-EEEEcCC-CCEEEEEeCCCcEEEEecCCCceeeeeec---------------CCcEEEEEEccCC
Q psy10953 89 ----------WV-L-STAFTRD-GKFFISASADHTVRVWNFARRENMHTFKH---------------ADQVWCVCVAPDG 140 (181)
Q Consensus 89 ----------~v-~-~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---------------~~~v~~~~~sp~g 140 (181)
.. . .++|+|+ +.++++-..++.|+.|+..... ...... -.....++++|+|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 11 3 8999995 6777777778899999876431 111111 1347899999999
Q ss_pred CEEEEEc-CCCcEEEEeCCCCeeEEEc
Q psy10953 141 DKFVSVG-EDKAVHMYSYKPEEEVEVN 166 (181)
Q Consensus 141 ~~l~~~~-~d~~v~i~~~~~~~~~~~~ 166 (181)
+++++-. .++.|+.|+...+....+.
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 9888887 8899999998777644443
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.18 E-value=1.8e-09 Score=89.56 Aligned_cols=146 Identities=14% Similarity=0.150 Sum_probs=97.5
Q ss_pred eEEEEEEcCCCCEEEEEe-----CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCC------------
Q psy10953 13 DMWNVVFSPDDKYVLSGS-----QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDG------------ 75 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~-----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~------------ 75 (181)
.+..++|||||++||.+. ...+|+++|+.+++.+.... .......++|+ ||+.|+.+..+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 467889999999998533 23579999999999765421 11101357899 999999887774
Q ss_pred -cEEEEeCCCC-------------CcccEEEEEEcCCCCEEEEEeC----CCcEEEEecCCCc-eeeee-ecCCcEEEEE
Q psy10953 76 -IINIFDANTG-------------HSSWVLSTAFTRDGKFFISASA----DHTVRVWNFARRE-NMHTF-KHADQVWCVC 135 (181)
Q Consensus 76 -~v~i~d~~~~-------------~~~~v~~~~~s~~~~~l~~~~~----d~~i~v~d~~~~~-~~~~~-~~~~~v~~~~ 135 (181)
.|++|++.++ +......+.|+|+|++|+.... ...++++|+.++. ....+ .+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~- 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL- 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-
Confidence 4999988542 1224678899999997754332 2479999987653 23333 344444443
Q ss_pred EccCCCEEEEEc-CC---CcEEEEeCCCCe
Q psy10953 136 VAPDGDKFVSVG-ED---KAVHMYSYKPEE 161 (181)
Q Consensus 136 ~sp~g~~l~~~~-~d---~~v~i~~~~~~~ 161 (181)
++++|+.|+..+ .+ ..|..+++..+.
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 667777665544 33 578888887654
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.15 E-value=4.8e-09 Score=77.96 Aligned_cols=149 Identities=15% Similarity=0.188 Sum_probs=102.6
Q ss_pred eccCeeeEEEEEEcCCCCEEEE-------EeCCCcEEEEeCCCCcEEEEEe----cCCceEEEEEECCC-CCEEEEeeCC
Q psy10953 7 INVGPVDMWNVVFSPDDKYVLS-------GSQSGKINLYGVETGKLEQIFD----TRGKFTLSIAYSTD-GHWIASGALD 74 (181)
Q Consensus 7 ~~~~~~~~~~~~~s~~g~~l~~-------~~~d~~i~~~d~~~~~~~~~~~----~~~~~~~~~~~s~d-~~~l~~~~~d 74 (181)
+........+++|+++|+++++ +..++.|..||..+++...... .....+.++.++++ |+++++.. .
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~ 91 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-R 91 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-T
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-C
Confidence 3334444578999999988877 5778999999988888754332 02234568999999 76555443 4
Q ss_pred CcEEEEeCCCCC-------------cccEEEEEEcCCCCEEEEEeCC---------------CcEEEEecCCCceeeeee
Q psy10953 75 GIINIFDANTGH-------------SSWVLSTAFTRDGKFFISASAD---------------HTVRVWNFARRENMHTFK 126 (181)
Q Consensus 75 ~~v~i~d~~~~~-------------~~~v~~~~~s~~~~~l~~~~~d---------------~~i~v~d~~~~~~~~~~~ 126 (181)
+.+.+||.. +. ...+..++++|+|+++++...+ +.|..||.. ++......
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 478888865 21 1236789999999988776654 467777765 44333333
Q ss_pred cCCcEEEEEEc----cCCCEEEEE-cCCCcEEEEeCC
Q psy10953 127 HADQVWCVCVA----PDGDKFVSV-GEDKAVHMYSYK 158 (181)
Q Consensus 127 ~~~~v~~~~~s----p~g~~l~~~-~~d~~v~i~~~~ 158 (181)
.......++++ |+|+.++.+ ..++.|.+|+..
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 33457889999 999766554 567899999975
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.15 E-value=7.5e-08 Score=70.76 Aligned_cols=149 Identities=9% Similarity=0.089 Sum_probs=109.8
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG----- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~----- 85 (181)
..+.+++++++|++.++...++.|..||.. ++...... .....+..++++++|+..++...++.+..+|....
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~ 98 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYP 98 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEec
Confidence 457899999999988777778999999988 66654221 12244668999999997777666788999987621
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceee-eee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMH-TFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
....+..++++++|+++++...++.|..||.. ++... ... ....+.+++++++|+.+++...++.|..++. .+
T Consensus 99 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 176 (300)
T 2qc5_A 99 LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TG 176 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CC
Confidence 12457889999999988887778899999987 44332 122 2356889999999997777766788999988 44
Q ss_pred eeE
Q psy10953 161 EEV 163 (181)
Q Consensus 161 ~~~ 163 (181)
...
T Consensus 177 ~~~ 179 (300)
T 2qc5_A 177 KLE 179 (300)
T ss_dssp CEE
T ss_pred cEE
Confidence 433
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.14 E-value=8e-09 Score=76.92 Aligned_cols=135 Identities=15% Similarity=0.224 Sum_probs=94.9
Q ss_pred eEEEEEEcCCCCEEEEEeCC---------CcEEEEeCC-CCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQS---------GKINLYGVE-TGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFD 81 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d---------~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d 81 (181)
.+.+++++|+|++.++.... ..-.+|.+. .++....... ......++|+||++.|+. ...++.|..||
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-~~~pngi~~spdg~~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-VDISNGLDWSLDHKIFYYIDSLSYSVDAFD 177 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-ESBEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-cccccceEEcCCCCEEEEecCCCCcEEEEe
Confidence 46789999999976654322 234555554 3444333322 223458999999987755 45578899998
Q ss_pred CC--CCC-------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC-CcEEEEEEc-cCCCEEE
Q psy10953 82 AN--TGH-------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA-DQVWCVCVA-PDGDKFV 144 (181)
Q Consensus 82 ~~--~~~-------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~~s-p~g~~l~ 144 (181)
+. ++. ...+..++++++|++.++...++.|..||..+++.+..+..+ ..+++++|. |+++.|+
T Consensus 178 ~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 178 YDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp ECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred ccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEE
Confidence 63 321 134677899999998888888889999999888877777644 579999998 8988776
Q ss_pred EEcC
Q psy10953 145 SVGE 148 (181)
Q Consensus 145 ~~~~ 148 (181)
.++.
T Consensus 258 vt~~ 261 (297)
T 3g4e_A 258 VTCA 261 (297)
T ss_dssp EEEB
T ss_pred EEcC
Confidence 5553
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=1e-08 Score=79.08 Aligned_cols=139 Identities=9% Similarity=0.018 Sum_probs=100.4
Q ss_pred EEcCCCCEEEEEeC--CC---cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEeC
Q psy10953 18 VFSPDDKYVLSGSQ--SG---KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFDA 82 (181)
Q Consensus 18 ~~s~~g~~l~~~~~--d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d~ 82 (181)
...|+++++++... .. +|.++|..+++.+..+..... . .+.++|||++++.+. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34588888877653 22 889999999998876654322 3 789999999998875 3678999998
Q ss_pred CCCCc---------------ccEEEEEEcCCCCEEEEEeC--CCcEEEEecCCCceeee-eecCCcEEEEEEccCC-CEE
Q psy10953 83 NTGHS---------------SWVLSTAFTRDGKFFISASA--DHTVRVWNFARRENMHT-FKHADQVWCVCVAPDG-DKF 143 (181)
Q Consensus 83 ~~~~~---------------~~v~~~~~s~~~~~l~~~~~--d~~i~v~d~~~~~~~~~-~~~~~~v~~~~~sp~g-~~l 143 (181)
.+... .....++|+|+|++|+.++. +..|.++| .+++.+.. +..... +.+.|++ +.+
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~ 180 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTF 180 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceE
Confidence 65321 12346899999998888774 47899999 99888777 665443 3445555 445
Q ss_pred EEEcCCCcEEEEeCCCCeeE
Q psy10953 144 VSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~~~~~ 163 (181)
++.+.|+.+.+++. ++..+
T Consensus 181 ~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 181 YLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred EEEcCCCCEEEEEC-CCcEE
Confidence 66677888888888 65444
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=3.9e-09 Score=88.05 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=94.5
Q ss_pred cCCCCEEEEEeCCCc---EEEE--eCC---CCcEEEEEecC----C--ceEEEEEECCCCCEEEEeeCC-----CcEEEE
Q psy10953 20 SPDDKYVLSGSQSGK---INLY--GVE---TGKLEQIFDTR----G--KFTLSIAYSTDGHWIASGALD-----GIINIF 80 (181)
Q Consensus 20 s~~g~~l~~~~~d~~---i~~~--d~~---~~~~~~~~~~~----~--~~~~~~~~s~d~~~l~~~~~d-----~~v~i~ 80 (181)
+|+|++++....++. -.+| +.. .++...++... + ..+..++|||||++|+.+..+ ..+++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489999886665432 4445 443 44444443221 1 245678999999999876543 369999
Q ss_pred eCCCCCccc-----E--EEEEEcCCCCEEEEEeCCCc--------------EEEEecCCCce--eeeee---cCCcEEEE
Q psy10953 81 DANTGHSSW-----V--LSTAFTRDGKFFISASADHT--------------VRVWNFARREN--MHTFK---HADQVWCV 134 (181)
Q Consensus 81 d~~~~~~~~-----v--~~~~~s~~~~~l~~~~~d~~--------------i~v~d~~~~~~--~~~~~---~~~~v~~~ 134 (181)
|+.++.... + ..++|+|| +.|+.++.++. |++|++.++.. ...+. +...+.++
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 998775321 1 35789999 98888776554 88999876642 22222 22347899
Q ss_pred EEccCCCEEEEEcCC-----CcEEEEeCCCC
Q psy10953 135 CVAPDGDKFVSVGED-----KAVHMYSYKPE 160 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d-----~~v~i~~~~~~ 160 (181)
.+||||++|+..+.+ ..|++|++.++
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 999999998877744 38999998765
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.13 E-value=7.3e-09 Score=80.08 Aligned_cols=154 Identities=16% Similarity=0.221 Sum_probs=101.6
Q ss_pred EEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCcEEEEEecCCce---E----EEEEECCCCCEEEEe-------------
Q psy10953 14 MWNVVFSPDDKYVLSGSQ--SGKINLYGVETGKLEQIFDTRGKF---T----LSIAYSTDGHWIASG------------- 71 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~---~----~~~~~s~d~~~l~~~------------- 71 (181)
.+.++|+|||+++++++. ++.|.++|+.+++.+..+...+.. . .-+..++||++++..
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~ 218 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 218 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecc
Confidence 457899999999988864 689999999999887766532210 0 012334444443332
Q ss_pred -------------------------eCCCcEEEEeCCCCCc---c-----------------cEEEEEEcCCCCEEEEEe
Q psy10953 72 -------------------------ALDGIINIFDANTGHS---S-----------------WVLSTAFTRDGKFFISAS 106 (181)
Q Consensus 72 -------------------------~~d~~v~i~d~~~~~~---~-----------------~v~~~~~s~~~~~l~~~~ 106 (181)
+.++.|++.|...... . ....++++|+++.+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~ 298 (386)
T 3sjl_D 219 VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV 298 (386)
T ss_dssp CCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred eeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe
Confidence 2234444444432110 0 012256677777555543
Q ss_pred C----------CCcEEEEecCCCceeeeeecCCcEEEEEEccCCC-EEEEE-cCCCcEEEEeCCCCeeEEEcC
Q psy10953 107 A----------DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGD-KFVSV-GEDKAVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 107 ~----------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~-~~d~~v~i~~~~~~~~~~~~~ 167 (181)
. ...|.++|+++++.+..+.....+++++++||++ +|++. ..++.|.++|..+++.+....
T Consensus 299 ~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 299 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 2 2468899999998888887767899999999997 66664 458999999999998876443
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.10 E-value=2.8e-08 Score=75.05 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=94.9
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-------
Q psy10953 15 WNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH------- 86 (181)
Q Consensus 15 ~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~------- 86 (181)
-..+|+|+++ ++++...++.|..||..+++... +.. ...+.++.++++|+++++. .+ .+.+||..++.
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~-~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-HAL-PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EEC-SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EEC-CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC
Confidence 5688999755 55666678899999998876543 332 3346688999999877654 33 48889876432
Q ss_pred -----cccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEE-cCCCcEEE
Q psy10953 87 -----SSWVLSTAFTRDGKFFISASA------DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSV-GEDKAVHM 154 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~-~~d~~v~i 154 (181)
...+..+.++|+|+++++... .+.|+.++ +++.............++|+|+|+.++.+ +.++.|.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 135788999999997776542 24566666 44332222233457789999999876554 45789999
Q ss_pred EeCC
Q psy10953 155 YSYK 158 (181)
Q Consensus 155 ~~~~ 158 (181)
|++.
T Consensus 206 ~d~~ 209 (326)
T 2ghs_A 206 VPLD 209 (326)
T ss_dssp EEBC
T ss_pred EEcc
Confidence 9985
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.10 E-value=1.2e-07 Score=69.61 Aligned_cols=148 Identities=6% Similarity=0.088 Sum_probs=107.5
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEE-EecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-----
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQI-FDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG----- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~----- 85 (181)
..+..++++++|++.++...++.|..+|.. ++.... +.........+.++++|+..++...++.+..+|....
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~ 182 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYP 182 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEE
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEee
Confidence 457889999999988777778899999987 665533 2222344668999999996666666788999987321
Q ss_pred ---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeee-ee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 86 ---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHT-FK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
....+..++++++|+++++....+.|.+||. ++..... .. ....+.+++++++|+.+++...++.|..|+. .+
T Consensus 183 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 260 (300)
T 2qc5_A 183 LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DN 260 (300)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TS
T ss_pred CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CC
Confidence 2235788999999998887777778999998 4332221 22 3356889999999997777766789999998 34
Q ss_pred ee
Q psy10953 161 EE 162 (181)
Q Consensus 161 ~~ 162 (181)
..
T Consensus 261 ~~ 262 (300)
T 2qc5_A 261 TI 262 (300)
T ss_dssp CE
T ss_pred cE
Confidence 43
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=3.2e-08 Score=75.18 Aligned_cols=150 Identities=9% Similarity=0.072 Sum_probs=101.7
Q ss_pred eeEEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCcEEEEEecC------CceEEEEEECCCCCEE-EEee---CCCc
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQ-----SGKINLYGVETGKLEQIFDTR------GKFTLSIAYSTDGHWI-ASGA---LDGI 76 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s~d~~~l-~~~~---~d~~ 76 (181)
..+..++++++|++.++-.. ++.|.+||+.+++++..+... ......+++++++..+ ++-. .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 45789999999886665443 578999999999977666532 1233578899865444 4444 5788
Q ss_pred EEEEeCCCCC--------c-----------------------------ccEEEEEEcCCCCEEEEEeCCC-cEEEEecC-
Q psy10953 77 INIFDANTGH--------S-----------------------------SWVLSTAFTRDGKFFISASADH-TVRVWNFA- 117 (181)
Q Consensus 77 v~i~d~~~~~--------~-----------------------------~~v~~~~~s~~~~~l~~~~~d~-~i~v~d~~- 117 (181)
+.+||+.++. . ..+..++|+|+|+.|..+...+ .++.++..
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~ 226 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD 226 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH
Confidence 9999975321 0 1257899999998777766554 56555532
Q ss_pred --CCc-----e---eeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 118 --RRE-----N---MHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 118 --~~~-----~---~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
.+. . +....+.....+++++++|+.+++...++.|.+|+...++
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 227 LSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp HTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred hcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 110 0 1111223345678999999999998889999999984454
No 219
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=6.4e-08 Score=71.21 Aligned_cols=151 Identities=13% Similarity=0.090 Sum_probs=104.8
Q ss_pred EEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCcEEEEEecCC-ceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCCccc
Q psy10953 14 MWNVVFSPDDKYVLSGSQ--SGKINLYGVETGKLEQIFDTRG-KFTLSIAYSTDGHWIAS-GALDGIINIFDANTGHSSW 89 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~~~~ 89 (181)
...++|+||+.+.++.+. ++.|+++|..+++.+..+.... .+...+.++ +..|.. .-.++.+.++|..+.....
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 468999998755555543 5799999999999988776432 233455554 445554 4457899999987543211
Q ss_pred E------EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC------CcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 90 V------LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA------DQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 90 v------~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
. ....++++|+.++.+..++.+.++|..+.+.+..+.-. ..++.+.+. +|+.++....++.|.+.|.
T Consensus 101 ~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 101 NFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred EEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence 1 12346778876666666889999999998877776521 136788888 7766666656789999999
Q ss_pred CCCeeEEEcC
Q psy10953 158 KPEEEVEVNG 167 (181)
Q Consensus 158 ~~~~~~~~~~ 167 (181)
.+++.+....
T Consensus 180 ~tg~V~~~I~ 189 (266)
T 2iwa_A 180 KDGTLLGWIL 189 (266)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9987765443
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.01 E-value=1.6e-07 Score=70.93 Aligned_cols=133 Identities=14% Similarity=0.191 Sum_probs=91.1
Q ss_pred eeEEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCCcEEEEeCC-
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQ------SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDGIINIFDAN- 83 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~- 83 (181)
..+.+++++|+|++.++... .+.|..++ +++....... ......++|+||++.++.+ ..++.|.+||+.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC-CcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 34788999999997665432 24455555 5555443322 2234578999999877654 456889999975
Q ss_pred -CC-C-------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec-CCcEEEEEEc-cCCCEEEEE
Q psy10953 84 -TG-H-------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH-ADQVWCVCVA-PDGDKFVSV 146 (181)
Q Consensus 84 -~~-~-------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~v~~~~~s-p~g~~l~~~ 146 (181)
++ . ...+..++++++|+++++...++.|..||. +++.+..+.. ...+.+++|+ |+++.|+.+
T Consensus 211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 33 1 123567889999998887777788999998 4555555553 3469999998 898877555
Q ss_pred cC
Q psy10953 147 GE 148 (181)
Q Consensus 147 ~~ 148 (181)
+.
T Consensus 290 ~~ 291 (326)
T 2ghs_A 290 SA 291 (326)
T ss_dssp EB
T ss_pred ec
Confidence 43
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.99 E-value=1e-10 Score=90.14 Aligned_cols=136 Identities=12% Similarity=0.150 Sum_probs=76.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEE------EE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLST------AF 95 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~------~~ 95 (181)
++..+++++.|+.|+.||..+|+.+..+.. +. +.+..+..++..+++++.|+.++.||..++...+.... .-
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~-~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DP-VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CC-SCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CC-ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 678899999999999999999998876665 33 22334456777788888999999999976643211100 01
Q ss_pred cC---CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 96 TR---DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 96 s~---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
+| .+..+++++.++.++.||..+++.+..+..... ..++|++..+++++.++.|+.||..+++.
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 11 345667788889999999999988776654332 34567888999999999999999987754
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=7.6e-08 Score=75.45 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=82.4
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEeCCCC
Q psy10953 21 PDDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFDANTG 85 (181)
Q Consensus 21 ~~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d~~~~ 85 (181)
|+++++++++.. ++|.++|..+++.+..+...... .+.++|||++++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 577877666543 69999999999999888764443 799999999888775 4678999999765
Q ss_pred Cccc---------------EEEEEEcCCCCEEEEEeC--CCcEEEEecCCCceeeeeecCC
Q psy10953 86 HSSW---------------VLSTAFTRDGKFFISASA--DHTVRVWNFARRENMHTFKHAD 129 (181)
Q Consensus 86 ~~~~---------------v~~~~~s~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~ 129 (181)
.... ...++|+|||+++..+.. ++.|.++|+.+.+.+..+...+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC
Confidence 4221 224689999998887764 5789999999998888776543
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.95 E-value=2e-08 Score=74.94 Aligned_cols=131 Identities=11% Similarity=0.114 Sum_probs=91.6
Q ss_pred EEEEEEcCCCCEEEE----EeC-------------CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC--
Q psy10953 14 MWNVVFSPDDKYVLS----GSQ-------------SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD-- 74 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d-- 74 (181)
+.+++++|+|++.++ |.. .+.|..+|..+++..... . ......++|+||++.|+.+...
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ESSEEEEEECTTSSEEEEEECCC-
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CCCCcceEEcCCCCEEEEEecCCc
Confidence 356899999998876 332 246777777777765544 2 2234579999999988777655
Q ss_pred ----CcEEEEeCCCCC-----------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccC
Q psy10953 75 ----GIINIFDANTGH-----------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPD 139 (181)
Q Consensus 75 ----~~v~i~d~~~~~-----------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~ 139 (181)
+.+..|++..+. ...+..++++++|++.++. .+ .|.+||. .++.+..+..+..+.+++|+|+
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d 287 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQA 287 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSSCCCEEEECTT
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCCceeEEEEeCC
Confidence 689999875321 1122357889999965544 34 4999998 4556666665556889999999
Q ss_pred CCEEEEEcCC
Q psy10953 140 GDKFVSVGED 149 (181)
Q Consensus 140 g~~l~~~~~d 149 (181)
++.|+.++.+
T Consensus 288 ~~~L~it~~~ 297 (305)
T 3dr2_A 288 QQRLFITGGP 297 (305)
T ss_dssp SCEEEEEETT
T ss_pred CCEEEEEcCC
Confidence 9988887765
No 224
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.94 E-value=7.9e-08 Score=77.73 Aligned_cols=146 Identities=13% Similarity=0.137 Sum_probs=106.3
Q ss_pred eEEEEEE-c-CCCCEEEEEe------------------CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee
Q psy10953 13 DMWNVVF-S-PDDKYVLSGS------------------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA 72 (181)
Q Consensus 13 ~~~~~~~-s-~~g~~l~~~~------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~ 72 (181)
....+++ + |+++++++++ .++.+.+.|.++.+....+...+. ...+.++|||+++++.+
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~-pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN-LDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC-CCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC-ccceEECCCCCEEEEEe
Confidence 3568887 5 9999998884 345799999999888876665443 24678999999998877
Q ss_pred CCC--------------------------------------cEEEEeCCC--CCc--c------cEEEEEEcCCCCEEEE
Q psy10953 73 LDG--------------------------------------IINIFDANT--GHS--S------WVLSTAFTRDGKFFIS 104 (181)
Q Consensus 73 ~d~--------------------------------------~v~i~d~~~--~~~--~------~v~~~~~s~~~~~l~~ 104 (181)
.+. .|.+.|..+ +.. . ...++.++|||++++.
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V 293 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCV 293 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEE
Confidence 553 366667665 221 1 1235789999997766
Q ss_pred Ee-CCCcEEEEecCCCc------------eeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 105 AS-ADHTVRVWNFARRE------------NMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 105 ~~-~d~~i~v~d~~~~~------------~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
++ .+.+|.++|+.+.+ ...+.......+.++|+|+|..+++.-.|+.|.+|++..
T Consensus 294 ~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 294 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 66 57899999998642 233444556789999999994455566799999999866
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=5.1e-08 Score=80.74 Aligned_cols=149 Identities=13% Similarity=0.172 Sum_probs=111.5
Q ss_pred EEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCcEEEEEecCCc---------eEEEEEECCCC--
Q psy10953 16 NVVFSPDDKYVLSGSQSG-------------------KINLYGVETGKLEQIFDTRGK---------FTLSIAYSTDG-- 65 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~-------------------~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~s~d~-- 65 (181)
.++++|++.+++.+..++ .|..+|.++|+.+-.++.... ....+....+|
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 467899999988877654 599999999998876664211 11123333477
Q ss_pred -CEEEEeeCCCcEEEEeCCCCCccc---------E----------------------------------EEEEEcCCCCE
Q psy10953 66 -HWIASGALDGIINIFDANTGHSSW---------V----------------------------------LSTAFTRDGKF 101 (181)
Q Consensus 66 -~~l~~~~~d~~v~i~d~~~~~~~~---------v----------------------------------~~~~~s~~~~~ 101 (181)
..++.++.+|.++++|..+++..+ . ..++++|++.+
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred eeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 678889999999999998764211 0 03578888777
Q ss_pred EEEEeC-------------------------------------------CCcEEEEecCCCceeeeeecCCcEEEEEEcc
Q psy10953 102 FISASA-------------------------------------------DHTVRVWNFARRENMHTFKHADQVWCVCVAP 138 (181)
Q Consensus 102 l~~~~~-------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp 138 (181)
+++... .+.|+.||+.+++...++++...+++..++.
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~ 486 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT 486 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe
Confidence 665432 2679999999999988888766677777788
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 139 DGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 139 ~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
++..++.++.|+.+++||..+++.+-
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCceee
Confidence 88899989999999999999988764
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.91 E-value=9e-08 Score=79.42 Aligned_cols=148 Identities=14% Similarity=0.261 Sum_probs=109.5
Q ss_pred EEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCcEEEEEecCCc---------eEEEEEECCCCC-
Q psy10953 16 NVVFSPDDKYVLSGSQSGK-------------------INLYGVETGKLEQIFDTRGK---------FTLSIAYSTDGH- 66 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~~-------------------i~~~d~~~~~~~~~~~~~~~---------~~~~~~~s~d~~- 66 (181)
.++++|++.+++.+..++. |..+|.++|+.+-.++.... .........+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788899999988887753 99999999998876654211 111122223565
Q ss_pred --EEEEeeCCCcEEEEeCCCCCcc---------cEE--------------------------------------EEEEcC
Q psy10953 67 --WIASGALDGIINIFDANTGHSS---------WVL--------------------------------------STAFTR 97 (181)
Q Consensus 67 --~l~~~~~d~~v~i~d~~~~~~~---------~v~--------------------------------------~~~~s~ 97 (181)
.++.++.+|.++++|..+++.. +.. .++|+|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 6888999999999999876531 111 157888
Q ss_pred CCCEEEEEeC---------------------------------------------CCcEEEEecCCCceeeeeecCCcEE
Q psy10953 98 DGKFFISASA---------------------------------------------DHTVRVWNFARRENMHTFKHADQVW 132 (181)
Q Consensus 98 ~~~~l~~~~~---------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~v~ 132 (181)
+..+++.... ++.++.||+.+++...++++....+
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 478 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN 478 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc
Confidence 8776665421 3679999999999988887666566
Q ss_pred EEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 133 CVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 133 ~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
...++..+..++.++.|+.++.||..+|+++
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 5567778889999999999999999999876
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=2.9e-07 Score=67.31 Aligned_cols=151 Identities=13% Similarity=0.111 Sum_probs=103.7
Q ss_pred EEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCcEEEEEecCCc-eEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCCccc
Q psy10953 14 MWNVVFSPDDKYVLSGSQSG--KINLYGVETGKLEQIFDTRGK-FTLSIAYSTDGHWIASG-ALDGIINIFDANTGHSSW 89 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~~~~~~~ 89 (181)
.-.+.|+ ++.+..+++.++ .|+.+|+++++.+..+..... +...+.+ ++..|... -.++.+.+||..+.....
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 3568888 676667777766 899999999999887765433 2234444 45555544 458899999997654221
Q ss_pred E-----EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC------CcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 90 V-----LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA------DQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 90 v-----~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
. ...+++++++.|+.+..+..|.++|..+.+.+..+.-. ..++.+.+. +|+.++..-.++.|.+.|..
T Consensus 122 ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 122 SFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp EEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred EEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 1 11345567776666666778999999998877776421 234567776 77655555568899999999
Q ss_pred CCeeEEEcCC
Q psy10953 159 PEEEVEVNGG 168 (181)
Q Consensus 159 ~~~~~~~~~~ 168 (181)
+++.+....-
T Consensus 201 tG~V~~~Id~ 210 (262)
T 3nol_A 201 TGKVTGIIDL 210 (262)
T ss_dssp TCBEEEEEEC
T ss_pred CCcEEEEEEC
Confidence 9987765444
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=5.2e-08 Score=74.02 Aligned_cols=143 Identities=10% Similarity=0.144 Sum_probs=98.0
Q ss_pred EEEEEEcCCCCEE-EEEe---CCCcEEEEeCCCCcEEEEEecC-------------C----------------ceEEEEE
Q psy10953 14 MWNVVFSPDDKYV-LSGS---QSGKINLYGVETGKLEQIFDTR-------------G----------------KFTLSIA 60 (181)
Q Consensus 14 ~~~~~~s~~g~~l-~~~~---~d~~i~~~d~~~~~~~~~~~~~-------------~----------------~~~~~~~ 60 (181)
+.+++++|++..+ ++-. .++.|.+||..+++....+..+ + .....++
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia 201 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV 201 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE
Confidence 4688999865555 4444 5789999999888776654221 0 1246799
Q ss_pred ECCCCCEEEEeeCCC-cEEEEeCC---C---------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce
Q psy10953 61 YSTDGHWIASGALDG-IINIFDAN---T---------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARREN 121 (181)
Q Consensus 61 ~s~d~~~l~~~~~d~-~v~i~d~~---~---------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 121 (181)
++|||+.|+.+..++ .++.++.. . ++......++++++|+++++...++.|.+||..+++.
T Consensus 202 ~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 202 LDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp ECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred eccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE
Confidence 999999888876655 55555431 1 1112345689999999999988899999999855543
Q ss_pred eeeee--cCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 122 MHTFK--HADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 122 ~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
..... ....+.+++|+++|+.+++.+..+.+.+|.
T Consensus 282 ~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 282 KLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred EEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 22222 234588999999999888887665554443
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.87 E-value=2.4e-07 Score=76.77 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=96.3
Q ss_pred EEEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCcE--EEEEecCC---ceEEEEEECCCCCEEEEee---
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGK-------------INLYGVETGKL--EQIFDTRG---KFTLSIAYSTDGHWIASGA--- 72 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~-------------i~~~d~~~~~~--~~~~~~~~---~~~~~~~~s~d~~~l~~~~--- 72 (181)
...++|+ ||+.|+.+..+.. |++|++.+++. ..++.... ....++.+||||++|+...
T Consensus 177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 3578999 9999998887743 99999987653 23333222 2355789999999886543
Q ss_pred -CCCcEEEEeCCCCCc---------ccEEEEEEcCCCCEE-EEEeCC---CcEEEEecCCCce---eeeeecCCcEEEEE
Q psy10953 73 -LDGIINIFDANTGHS---------SWVLSTAFTRDGKFF-ISASAD---HTVRVWNFARREN---MHTFKHADQVWCVC 135 (181)
Q Consensus 73 -~d~~v~i~d~~~~~~---------~~v~~~~~s~~~~~l-~~~~~d---~~i~v~d~~~~~~---~~~~~~~~~v~~~~ 135 (181)
..+.++++|+.++.. ...... ++++|..| +....+ +.|..+|+.++.. .....+...+. .
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T 332 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence 235899999865421 112222 56666644 444433 5799999987643 22234444444 8
Q ss_pred EccCCCEEEEEcCCC---cEEEEeCCCCeeEEE
Q psy10953 136 VAPDGDKFVSVGEDK---AVHMYSYKPEEEVEV 165 (181)
Q Consensus 136 ~sp~g~~l~~~~~d~---~v~i~~~~~~~~~~~ 165 (181)
++++++.|+....++ .|++|++..+....+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCCeeEEe
Confidence 899999988777543 688898875544333
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.86 E-value=2.1e-07 Score=72.98 Aligned_cols=133 Identities=11% Similarity=0.120 Sum_probs=92.3
Q ss_pred EEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCCcEEEEEecC--CceEEEEEE--CCCCCEEEEe
Q psy10953 15 WNVVFSPDDKYVLSGS-------------------QSGKINLYGVETGKLEQIFDTR--GKFTLSIAY--STDGHWIASG 71 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~-------------------~d~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~--s~d~~~l~~~ 71 (181)
+++.|+|+++.++++. ...+|.+||+.+++.++.+... +.....+.| +|++++++.+
T Consensus 191 Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~ 270 (462)
T 2ece_A 191 YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN 270 (462)
T ss_dssp CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE
T ss_pred ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE
Confidence 4578899999888885 3689999999999888877653 122334444 9999988776
Q ss_pred eC------CCcEEEEe-------------CCCCC---------------cccEEEEEEcCCCCEEEEEeC-CCcEEEEec
Q psy10953 72 AL------DGIINIFD-------------ANTGH---------------SSWVLSTAFTRDGKFFISASA-DHTVRVWNF 116 (181)
Q Consensus 72 ~~------d~~v~i~d-------------~~~~~---------------~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~ 116 (181)
.. ++.|.+|. +.... ...+..+.+||||++|.++.. .+.|.+||+
T Consensus 271 ~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 271 MVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred EeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 64 45665432 22110 134577899999997766664 678999998
Q ss_pred CCC---ceeeeeecC---------------CcEEEEEEccCCCEEEEEc
Q psy10953 117 ARR---ENMHTFKHA---------------DQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 117 ~~~---~~~~~~~~~---------------~~v~~~~~sp~g~~l~~~~ 147 (181)
... +.+..+.-. .....++++|||++++++.
T Consensus 351 ~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 351 SNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 532 333333322 1367899999999998888
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.84 E-value=1.8e-07 Score=75.64 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=100.3
Q ss_pred EEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEeCCC--CcE-EEEEecC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSG--------------------------------------KINLYGVET--GKL-EQIFDTR 52 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~--------------------------------------~i~~~d~~~--~~~-~~~~~~~ 52 (181)
.-.++++|||+++++++.+. .|.+.|.++ ++. ...+...
T Consensus 197 pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg 276 (595)
T 1fwx_A 197 LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA 276 (595)
T ss_dssp CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC
Confidence 35688999999998887543 477888876 444 3444332
Q ss_pred CceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCC-------------------cccEEEEEEcCCCCEEEEEeCCCcEE
Q psy10953 53 GKFTLSIAYSTDGHWIAS-GALDGIINIFDANTGH-------------------SSWVLSTAFTRDGKFFISASADHTVR 112 (181)
Q Consensus 53 ~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~-------------------~~~v~~~~~s~~~~~l~~~~~d~~i~ 112 (181)
.. ..++.++|||+++++ +..+.+|.++|..+.. ......++|+|+|..+++...+..|.
T Consensus 277 ~~-PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 277 NN-PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp SS-CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CC-ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 22 237899999998766 4568899999987421 13468899999996667777899999
Q ss_pred EEecCC----------CceeeeeecCCcE--E----EEEEccCCCEEEEEcC---CCcE----------EEEeCCCCe
Q psy10953 113 VWNFAR----------RENMHTFKHADQV--W----CVCVAPDGDKFVSVGE---DKAV----------HMYSYKPEE 161 (181)
Q Consensus 113 v~d~~~----------~~~~~~~~~~~~v--~----~~~~sp~g~~l~~~~~---d~~v----------~i~~~~~~~ 161 (181)
+||+.. ...+..+.-...+ . +..++|||++|++... |+.+ +++++..++
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 999866 3444454422222 1 2345899999988764 3321 889985443
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=6.1e-07 Score=65.70 Aligned_cols=150 Identities=9% Similarity=0.074 Sum_probs=102.7
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-eEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccE---
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-FTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWV--- 90 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v--- 90 (181)
-.+.|+ ++.+..+.+.++.|+.+|+++++.+..+ .... +...+.+..+ +..+..-.++.+.+||..+......
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 567786 4566678888899999999999998776 4332 3334555432 3333455688999999976432111
Q ss_pred --EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec---C---CcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 91 --LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH---A---DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 91 --~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~---~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
...+++++++.|+.+..++.|+++|..+.+.+..+.- . ..++.+.+. +|+.++..-..+.|.+.|..+++.
T Consensus 135 ~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 135 SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp SSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred CCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence 1123456788777777788999999999887777652 1 235667776 776555555678999999999877
Q ss_pred EEEcCC
Q psy10953 163 VEVNGG 168 (181)
Q Consensus 163 ~~~~~~ 168 (181)
+....-
T Consensus 214 ~~~Idl 219 (268)
T 3nok_A 214 VGVIDA 219 (268)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 665444
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.81 E-value=3e-10 Score=87.54 Aligned_cols=143 Identities=13% Similarity=0.081 Sum_probs=77.7
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-eEE-EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEE----E
Q psy10953 19 FSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-FTL-SIAYSTDGHWIASGALDGIINIFDANTGHSSWVL----S 92 (181)
Q Consensus 19 ~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~-~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~----~ 92 (181)
+.++++.+++++.|+.|+.||.++++.+..+..+.. .+. +..+. ++..+++++.++.++.||+.++...+.. .
T Consensus 45 ~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~ 123 (369)
T 2hz6_A 45 THVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA 123 (369)
T ss_dssp -----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-------------
T ss_pred eEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc
Confidence 445777788888999999999998887655433211 110 11111 3456777888999999999877543321 2
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCC---CEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 93 TAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDG---DKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g---~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
..++|++..+++++.++.++.||.++++.+..+.... ....+++++. ..+++++.++.++.||..+++.+
T Consensus 124 ~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 3567788888888989999999999988776654221 2223334432 56777888999999999887654
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=1e-05 Score=59.00 Aligned_cols=156 Identities=10% Similarity=0.021 Sum_probs=99.5
Q ss_pred eeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC---CCcEEEEeCCCCC-
Q psy10953 12 VDMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL---DGIINIFDANTGH- 86 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~---d~~v~i~d~~~~~- 86 (181)
.....++++|++..|+ +-...+.|.+++...................++++|++..|+.+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 3567899999766555 4455678999998754433333222233468999997666555443 4678888765321
Q ss_pred -------cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 87 -------SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 87 -------~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
......++++|+++ ++++-...+.|.++|+................++++. .+..+++....+.|..++..
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 23467899999866 4455556788999998754433333323345667664 34444444456899999998
Q ss_pred CCeeEEEcCC
Q psy10953 159 PEEEVEVNGG 168 (181)
Q Consensus 159 ~~~~~~~~~~ 168 (181)
++..+.....
T Consensus 238 ~g~~~~~i~~ 247 (267)
T 1npe_A 238 ISKEMDTFHP 247 (267)
T ss_dssp TTEEEEEECC
T ss_pred CCCceEEEcc
Confidence 8877765543
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.78 E-value=7.8e-07 Score=65.42 Aligned_cols=137 Identities=9% Similarity=-0.004 Sum_probs=99.7
Q ss_pred EcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc---------
Q psy10953 19 FSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS--------- 87 (181)
Q Consensus 19 ~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~--------- 87 (181)
+.++|+.|+ +.-.++.+.++|..+.+.+..+... +. .+.+++||+.++.+..++.++++|..+...
T Consensus 71 i~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~ 147 (266)
T 2iwa_A 71 LTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN 147 (266)
T ss_dssp EEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC
Confidence 333455554 4556789999999999988877643 22 234566888787777788999999876421
Q ss_pred ----ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC--------------CcEEEEEEccCCCEE-EEEcC
Q psy10953 88 ----SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA--------------DQVWCVCVAPDGDKF-VSVGE 148 (181)
Q Consensus 88 ----~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--------------~~v~~~~~sp~g~~l-~~~~~ 148 (181)
...+.+.|. +|+.++....++.|.+.|.++++.+..+... ...++++++|+++.+ +++..
T Consensus 148 ~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 148 GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred CcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 124566777 7877777777889999999999887777532 356899999998765 55556
Q ss_pred CCcEEEEeCCC
Q psy10953 149 DKAVHMYSYKP 159 (181)
Q Consensus 149 d~~v~i~~~~~ 159 (181)
.+.+...++.+
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 78888888754
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.75 E-value=1.2e-05 Score=58.53 Aligned_cols=148 Identities=9% Similarity=-0.021 Sum_probs=97.2
Q ss_pred eEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCC----
Q psy10953 13 DMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALDGIINIFDANTGH---- 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~~~~---- 86 (181)
....++++|+++.|+ +-...+.|..++..++.....+.........+++++++..|+.+ ...+.|.++++....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 457899999766655 44457899999998665544443222345689999976655544 456789998875321
Q ss_pred ----cccEEEEEEcCCCC-EEEEEeC--CCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEc-CCCcEEEEe
Q psy10953 87 ----SSWVLSTAFTRDGK-FFISASA--DHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVG-EDKAVHMYS 156 (181)
Q Consensus 87 ----~~~v~~~~~s~~~~-~l~~~~~--d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~ 156 (181)
......++++|++. ++++... .+.|..+++.... ...+. .......++++|++++|+.+. ..+.|..++
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 13568899999654 4444433 4678888875432 22221 224578999999877665444 567999999
Q ss_pred CCCCe
Q psy10953 157 YKPEE 161 (181)
Q Consensus 157 ~~~~~ 161 (181)
.....
T Consensus 196 ~~g~~ 200 (267)
T 1npe_A 196 PAQPG 200 (267)
T ss_dssp TTEEE
T ss_pred cCCCc
Confidence 87543
No 237
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=1.1e-06 Score=69.08 Aligned_cols=146 Identities=11% Similarity=0.162 Sum_probs=97.9
Q ss_pred eEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-CC----cEEEEeCCCCC
Q psy10953 13 DMWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-DG----IINIFDANTGH 86 (181)
Q Consensus 13 ~~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d~----~v~i~d~~~~~ 86 (181)
....++++| ++..|+.+...+.|+.+|..++++..... .......++++++|++|+.+.. ++ .+.+++.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 346889998 46667666555889999998877665544 3334568999999996665543 11 34444433221
Q ss_pred c--------ccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEE-EEEcCCCcEEE
Q psy10953 87 S--------SWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKF-VSVGEDKAVHM 154 (181)
Q Consensus 87 ~--------~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l-~~~~~d~~v~i 154 (181)
. .....++++| +|.++++-..++.|+.++...+....... .......++|+|+|+++ ++-...+.|..
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1 2245678999 78877777778899999987665422222 22357799999999955 44456788999
Q ss_pred EeCCC
Q psy10953 155 YSYKP 159 (181)
Q Consensus 155 ~~~~~ 159 (181)
++...
T Consensus 297 ~~~d~ 301 (430)
T 3tc9_A 297 SDYDW 301 (430)
T ss_dssp EEEET
T ss_pred EeCCc
Confidence 88753
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.72 E-value=3.4e-06 Score=61.10 Aligned_cols=149 Identities=12% Similarity=0.053 Sum_probs=100.1
Q ss_pred EEEEEcCCCCEEEEEeCC--CcEEEEeCCCCcEEEEEecCCc-eEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCCcccE
Q psy10953 15 WNVVFSPDDKYVLSGSQS--GKINLYGVETGKLEQIFDTRGK-FTLSIAYSTDGHWIAS-GALDGIINIFDANTGHSSWV 90 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~~~~v 90 (181)
-.+.|++ +.+..+.+.+ ..|+.+|+++++.+..+..... +-..+.+. +..|.. .-.++.+.+||..+......
T Consensus 24 qGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 24 EGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp EEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred ccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 4788876 5555666665 4899999999999987765433 22344443 444444 45688999999976431110
Q ss_pred -----EEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC------CcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 91 -----LSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA------DQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 91 -----~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
...+++++++.|..+..++.|.++|..+.+.+..+.-. ..++.+.+. +|+.++..-..+.|.+.|..+
T Consensus 101 i~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 101 FRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred EeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 12244567776666666889999999998877766521 245566655 676665555678999999999
Q ss_pred CeeEEEcC
Q psy10953 160 EEEVEVNG 167 (181)
Q Consensus 160 ~~~~~~~~ 167 (181)
++.+....
T Consensus 180 G~V~~~id 187 (243)
T 3mbr_X 180 GKVVAWID 187 (243)
T ss_dssp CBEEEEEE
T ss_pred CCEEEEEE
Confidence 98776444
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.71 E-value=1.6e-06 Score=68.12 Aligned_cols=139 Identities=12% Similarity=0.225 Sum_probs=97.0
Q ss_pred CCCCEEE-EEeCCCcEEEEeCCCC----cEEEEEe------cCC-ceEEEEEECCCCCEEEEeeCC------CcEEEEeC
Q psy10953 21 PDDKYVL-SGSQSGKINLYGVETG----KLEQIFD------TRG-KFTLSIAYSTDGHWIASGALD------GIINIFDA 82 (181)
Q Consensus 21 ~~g~~l~-~~~~d~~i~~~d~~~~----~~~~~~~------~~~-~~~~~~~~s~d~~~l~~~~~d------~~v~i~d~ 82 (181)
+++++|+ .+..+.+|.++|+.+. ++...+. ..+ .....+..+|+| .+++...+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7888876 4556789999999766 5555552 111 123356778999 66665544 78999998
Q ss_pred CCCCc-----------ccEEEEEEcCCCCEEEEEe-------------------CCCcEEEEecCCCceeeeeecC---C
Q psy10953 83 NTGHS-----------SWVLSTAFTRDGKFFISAS-------------------ADHTVRVWNFARRENMHTFKHA---D 129 (181)
Q Consensus 83 ~~~~~-----------~~v~~~~~s~~~~~l~~~~-------------------~d~~i~v~d~~~~~~~~~~~~~---~ 129 (181)
.+... ..-..+.|+|+++.++++. .+..|.+||+.+++...++... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 75431 1234578899999888885 3689999999988777777643 2
Q ss_pred cEEEEEE--ccCCCEEEEEcC------CCcEEEEeCCCC
Q psy10953 130 QVWCVCV--APDGDKFVSVGE------DKAVHMYSYKPE 160 (181)
Q Consensus 130 ~v~~~~~--sp~g~~l~~~~~------d~~v~i~~~~~~ 160 (181)
....++| +|+++++++++. ++.|.+|....+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 4556666 999999877764 568877776543
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=2.3e-06 Score=64.16 Aligned_cols=145 Identities=12% Similarity=0.147 Sum_probs=97.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-------------------CceEEEEEECC-CCCEEEEeeC
Q psy10953 14 MWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR-------------------GKFTLSIAYST-DGHWIASGAL 73 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-------------------~~~~~~~~~s~-d~~~l~~~~~ 73 (181)
..+++++++|++++++..++.|..|+..+++........ ......+++++ +++ |+.+..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEEC
Confidence 467889999998888888999999998876654332110 01346788997 665 444544
Q ss_pred CCcEEEEeCCCCC------------cccEEEEEEcC-CCCEEEEEeC-----------------CCcEEEEecCCCceee
Q psy10953 74 DGIINIFDANTGH------------SSWVLSTAFTR-DGKFFISASA-----------------DHTVRVWNFARRENMH 123 (181)
Q Consensus 74 d~~v~i~d~~~~~------------~~~v~~~~~s~-~~~~l~~~~~-----------------d~~i~v~d~~~~~~~~ 123 (181)
.+.+..+|..++. ......+++++ +|+++++-.. ++.+..||..+++...
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 4557788875431 12467899999 9997776532 3678888887665332
Q ss_pred eeecCCcEEEEEEccCCCEEEEE-cCCCcEEEEeCCC
Q psy10953 124 TFKHADQVWCVCVAPDGDKFVSV-GEDKAVHMYSYKP 159 (181)
Q Consensus 124 ~~~~~~~v~~~~~sp~g~~l~~~-~~d~~v~i~~~~~ 159 (181)
........+.++++|+|+.++.+ ..++.|..|++..
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 22222345679999999966555 5568999999864
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.69 E-value=1.7e-06 Score=63.21 Aligned_cols=131 Identities=8% Similarity=0.117 Sum_probs=94.4
Q ss_pred EEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc-----
Q psy10953 14 MWNVVFSPDDKYVLSG-SQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS----- 87 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~----- 87 (181)
.+...+.++++.|+.. ..++.+.+||.++.+.+..+...+. .+.+++|++.|+....++.+.++|..+...
T Consensus 87 ~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 87 YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 3444455566666544 4588999999999999988876443 233445788888777788899999876421
Q ss_pred --------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC-------------CcEEEEEEccCCCEEEEE
Q psy10953 88 --------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA-------------DQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 88 --------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------------~~v~~~~~sp~g~~l~~~ 146 (181)
..++.+.|. +|+.++....+..|.+.|.++++.+..+... +..+++|++|+++.|+..
T Consensus 164 V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred eccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 123446665 7888877778889999999999887766421 346899999998887766
Q ss_pred cC
Q psy10953 147 GE 148 (181)
Q Consensus 147 ~~ 148 (181)
+.
T Consensus 243 GK 244 (262)
T 3nol_A 243 GK 244 (262)
T ss_dssp ET
T ss_pred CC
Confidence 64
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.62 E-value=2.4e-06 Score=62.51 Aligned_cols=129 Identities=8% Similarity=0.052 Sum_probs=91.9
Q ss_pred EEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc------
Q psy10953 15 WNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS------ 87 (181)
Q Consensus 15 ~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~------ 87 (181)
+...+.++++.|+ +...++.+.+||.++.+.+..+...+. .+.+.+|++.|+....++.++++|..+...
T Consensus 97 FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 97 FAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 4433444555554 455688999999999999988876443 233345788888887889999999876431
Q ss_pred -------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecC--------------CcEEEEEEccCCCEEEEE
Q psy10953 88 -------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHA--------------DQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 88 -------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--------------~~v~~~~~sp~g~~l~~~ 146 (181)
..++.+.|. +|+.++....+..|.+.|.++++.+..+... +..+++|++|+++.|+..
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 123455555 7887777777889999999999877766421 357899999987666555
Q ss_pred c
Q psy10953 147 G 147 (181)
Q Consensus 147 ~ 147 (181)
+
T Consensus 253 G 253 (268)
T 3nok_A 253 G 253 (268)
T ss_dssp E
T ss_pred C
Confidence 5
No 243
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.56 E-value=2.8e-05 Score=58.69 Aligned_cols=148 Identities=11% Similarity=0.186 Sum_probs=104.2
Q ss_pred eeeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCcEEEEEecC-------CceEEEEEE---CCCCCEEEEee-------
Q psy10953 11 PVDMWNVVFSPDDKYVLSGS-QSGKINLYGVETGKLEQIFDTR-------GKFTLSIAY---STDGHWIASGA------- 72 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~---s~d~~~l~~~~------- 72 (181)
....-+++|++....++.++ ..++|..||...+......... ......+.+ .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33345688988666666666 7899999998766554442211 113468999 68888777644
Q ss_pred ------CCCcEEEEeCC---CCCc---------------------ccEEEEEEcCCCCEEEEEeCC-CcEEEEecCCCce
Q psy10953 73 ------LDGIINIFDAN---TGHS---------------------SWVLSTAFTRDGKFFISASAD-HTVRVWNFARREN 121 (181)
Q Consensus 73 ------~d~~v~i~d~~---~~~~---------------------~~v~~~~~s~~~~~l~~~~~d-~~i~v~d~~~~~~ 121 (181)
.+..+..||+. ++.. .....++.+++|+..++.+.. +.|..++.....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~- 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT- 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-
Confidence 26789999988 4421 136789999999999988887 888888776542
Q ss_pred eeeee--c-----CCcEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 122 MHTFK--H-----ADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 122 ~~~~~--~-----~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+..+. . ....++++++|+|+.|++....+.+..+|+..
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 22221 1 11266999999999988887799999999874
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.54 E-value=2.8e-06 Score=71.12 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=87.7
Q ss_pred eEEEEEEc-CCCCEEEEEeC-C----CcEEEEeCCCC-cEEE-EEecCCceEEEEEECCCCCEEEEeeCC-----CcEEE
Q psy10953 13 DMWNVVFS-PDDKYVLSGSQ-S----GKINLYGVETG-KLEQ-IFDTRGKFTLSIAYSTDGHWIASGALD-----GIINI 79 (181)
Q Consensus 13 ~~~~~~~s-~~g~~l~~~~~-d----~~i~~~d~~~~-~~~~-~~~~~~~~~~~~~~s~d~~~l~~~~~d-----~~v~i 79 (181)
.+...+|| |||++||.+.. + .+|+++|+.++ +.+. .+. .....+.|+|||+.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 45778999 99999885543 2 25999999988 6321 111 112257899999988887665 35777
Q ss_pred EeCCCCC-----------cccEEEEEEcCCCCEEEEEeC---CCcEEEEecCCCc-ee--eee-e-cCCcEEEEEEccCC
Q psy10953 80 FDANTGH-----------SSWVLSTAFTRDGKFFISASA---DHTVRVWNFARRE-NM--HTF-K-HADQVWCVCVAPDG 140 (181)
Q Consensus 80 ~d~~~~~-----------~~~v~~~~~s~~~~~l~~~~~---d~~i~v~d~~~~~-~~--~~~-~-~~~~v~~~~~sp~g 140 (181)
+++.++. ......+.|+|||++|+..+. ...|+++|+.++. .. ..+ . .....+.+.++. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 8875432 123456789999998776552 3458888987652 12 222 2 233445555443 5
Q ss_pred CEE-EEEcCC----CcEEEEeCCC
Q psy10953 141 DKF-VSVGED----KAVHMYSYKP 159 (181)
Q Consensus 141 ~~l-~~~~~d----~~v~i~~~~~ 159 (181)
+.| +....+ ..|..+++..
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTS
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCC
Confidence 544 444333 2566666653
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.50 E-value=6.6e-06 Score=68.04 Aligned_cols=149 Identities=15% Similarity=0.252 Sum_probs=105.1
Q ss_pred EEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCcEEEEEecCC---------ceEEEEEECCCCC-
Q psy10953 16 NVVFSPDDKYVLSGSQSG-------------------KINLYGVETGKLEQIFDTRG---------KFTLSIAYSTDGH- 66 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~d~-------------------~i~~~d~~~~~~~~~~~~~~---------~~~~~~~~s~d~~- 66 (181)
.++++|++.+++.+..++ .|..+|.++|+.+-.++... .......+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 367888888888887665 39999999999887666421 1111223334665
Q ss_pred --EEEEeeCCCcEEEEeCCCCCcc---------cEE-----------------------------------EEEEcCCCC
Q psy10953 67 --WIASGALDGIINIFDANTGHSS---------WVL-----------------------------------STAFTRDGK 100 (181)
Q Consensus 67 --~l~~~~~d~~v~i~d~~~~~~~---------~v~-----------------------------------~~~~s~~~~ 100 (181)
.++.++.+|.++++|..+++.. +.. .++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 6888999999999998776522 111 146777655
Q ss_pred EEEEE------------------------------------eCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEE
Q psy10953 101 FFISA------------------------------------SADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 101 ~l~~~------------------------------------~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 144 (181)
.+... ..++.|+-||+.+++...........+...+...+..++
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEE
Confidence 44331 123779999999999888877655555555566788888
Q ss_pred EEcCCCcEEEEeCCCCeeEE
Q psy10953 145 SVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~~~ 164 (181)
.++.|+.++.||..+++.+-
T Consensus 474 ~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp EECTTSEEEEEETTTCCEEE
T ss_pred EECCcccchhhhhhcChhhe
Confidence 89999999999999887763
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=1.4e-05 Score=57.85 Aligned_cols=130 Identities=10% Similarity=0.105 Sum_probs=91.3
Q ss_pred EEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc------
Q psy10953 15 WNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS------ 87 (181)
Q Consensus 15 ~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~------ 87 (181)
+...+.++++.|+ ..-.++.+.+||.++.+.+..+...+.. ..+ .+|++.|+.+..++.++++|..+...
T Consensus 66 fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 66 FGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp CEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 3444444555554 4556889999999999999888765432 234 45777777777788999999876432
Q ss_pred -------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec--------------CCcEEEEEEccCCCEEEEE
Q psy10953 88 -------SWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH--------------ADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 88 -------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--------------~~~v~~~~~sp~g~~l~~~ 146 (181)
..++.+.+. +|+.++....+..|.+.|.++++.+..+.. .+..+++|++|+++.|+..
T Consensus 143 ~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred ccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 123344443 778777777788999999999987776641 1246899999988776666
Q ss_pred cC
Q psy10953 147 GE 148 (181)
Q Consensus 147 ~~ 148 (181)
+.
T Consensus 222 GK 223 (243)
T 3mbr_X 222 GK 223 (243)
T ss_dssp ET
T ss_pred CC
Confidence 63
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=3.4e-05 Score=57.74 Aligned_cols=145 Identities=12% Similarity=0.139 Sum_probs=92.6
Q ss_pred EEEEEEcC-CCCEEEEEeC-----------------CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEe-eCC
Q psy10953 14 MWNVVFSP-DDKYVLSGSQ-----------------SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASG-ALD 74 (181)
Q Consensus 14 ~~~~~~s~-~g~~l~~~~~-----------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~-~~d 74 (181)
..++++.+ +|++.++-.. ++.|..+|..+++......... ....++++++|+.|+.+ ..+
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-~p~gia~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH-VPGGAEVSADSSFVLVAEFLS 206 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES-CCCEEEECTTSSEEEEEEGGG
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc-cCcceEECCCCCEEEEEeCCC
Confidence 56799999 8986665432 3678888887776544332212 22478999999866655 556
Q ss_pred CcEEEEeCCCCC----------cccEEEEEEcCCCCEEEEEeC----------CCcEEEEecCCCceeeeeecC-----C
Q psy10953 75 GIINIFDANTGH----------SSWVLSTAFTRDGKFFISASA----------DHTVRVWNFARRENMHTFKHA-----D 129 (181)
Q Consensus 75 ~~v~i~d~~~~~----------~~~v~~~~~s~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~-----~ 129 (181)
+.|..|++.... .. ...++++++|+++++... .+.|..+|.. ++.+..+..+ .
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~ 284 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGE 284 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTS
T ss_pred CeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccc
Confidence 889999886421 11 567889999997776654 4568888864 5555555422 2
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 130 QVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 130 ~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
.+.++++ .+++.+++...++.|..+++....+
T Consensus 285 ~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~~ 316 (322)
T 2fp8_A 285 HFEQIQE-HDGLLYIGTLFHGSVGILVYDKKGN 316 (322)
T ss_dssp CCCEEEE-ETTEEEEECSSCSEEEEEEC-----
T ss_pred cceEEEE-eCCEEEEeecCCCceEEEecccccC
Confidence 4556665 4665555555678999998865443
No 248
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.42 E-value=2.5e-05 Score=61.30 Aligned_cols=144 Identities=11% Similarity=0.169 Sum_probs=92.4
Q ss_pred EEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC---C-cEEEEeCCCCCc
Q psy10953 14 MWNVVFSPD--DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD---G-IINIFDANTGHS 87 (181)
Q Consensus 14 ~~~~~~s~~--g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d---~-~v~i~d~~~~~~ 87 (181)
...++|+|+ +..|+.+...+.|+.+|..+++...... .......++++++|+++++-... . .+...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 468999984 4555555444899999998888766544 33335689999999944443211 1 233333322211
Q ss_pred --------ccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCceeeee-e--cCCcEEEEEEccCCCEEEE-EcCCCcEEE
Q psy10953 88 --------SWVLSTAFTR-DGKFFISASADHTVRVWNFARRENMHTF-K--HADQVWCVCVAPDGDKFVS-VGEDKAVHM 154 (181)
Q Consensus 88 --------~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~--~~~~v~~~~~sp~g~~l~~-~~~d~~v~i 154 (181)
.....++++| +|.++++-..++.|+.+|..++.....+ . .......++++|+|++|+. -...+.|+.
T Consensus 220 ~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 220 ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 2234578899 7887777777889999998766542222 2 1222346999999995544 445678999
Q ss_pred EeCC
Q psy10953 155 YSYK 158 (181)
Q Consensus 155 ~~~~ 158 (181)
+++.
T Consensus 300 ~~~d 303 (433)
T 4hw6_A 300 VDYN 303 (433)
T ss_dssp EEBC
T ss_pred EeCC
Confidence 8865
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.41 E-value=0.0002 Score=54.50 Aligned_cols=151 Identities=9% Similarity=0.017 Sum_probs=96.5
Q ss_pred eeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEE-EEeeCCCcEEEEeCCCCC---
Q psy10953 12 VDMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWI-ASGALDGIINIFDANTGH--- 86 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l-~~~~~d~~v~i~d~~~~~--- 86 (181)
.....++|++.++.|+ +-...+.|..++..++.....+.........+++++.+..| ++-...+.|.+.++....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 3457889997666554 44567889999988766554443322223478888765555 444556788888876432
Q ss_pred -----cccEEEEEEcCCCC-EEEEEeCC-CcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCcEEEEeC
Q psy10953 87 -----SSWVLSTAFTRDGK-FFISASAD-HTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKAVHMYSY 157 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~-~l~~~~~d-~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~ 157 (181)
......++++|.+. ++++-... +.|..+++.......... .-...++++++|+++.|+.+. ..+.|..+++
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 23567899998654 45554444 788888876543222222 234578999998776665554 5678999998
Q ss_pred CCCee
Q psy10953 158 KPEEE 162 (181)
Q Consensus 158 ~~~~~ 162 (181)
.....
T Consensus 233 dG~~~ 237 (349)
T 3v64_C 233 DGSHR 237 (349)
T ss_dssp TSCSC
T ss_pred CCCce
Confidence 65433
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.37 E-value=0.00016 Score=55.88 Aligned_cols=154 Identities=8% Similarity=-0.001 Sum_probs=96.6
Q ss_pred CeeeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCC-
Q psy10953 10 GPVDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIA-SGALDGIINIFDANTGH- 86 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~-~~~~d~~v~i~d~~~~~- 86 (181)
.......++|++.++.| ++-...+.|..++..++.....+.........+++++.+..|+ +-...+.|.+.++....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 33446789999765555 4555678899999887765554433222234678887655554 44556778888775432
Q ss_pred -------cccEEEEEEcCCCCE-EEEEeCC-CcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCcEEEE
Q psy10953 87 -------SSWVLSTAFTRDGKF-FISASAD-HTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKAVHMY 155 (181)
Q Consensus 87 -------~~~v~~~~~s~~~~~-l~~~~~d-~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~ 155 (181)
......++++|.+.. +++-... +.|+.+++.......... .-...+.++++|+++.|+.+. ..+.|..+
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 235688999986654 4444444 678888876543222222 233578999998776665544 56789999
Q ss_pred eCCCCeeE
Q psy10953 156 SYKPEEEV 163 (181)
Q Consensus 156 ~~~~~~~~ 163 (181)
++....+.
T Consensus 274 d~dG~~~~ 281 (386)
T 3v65_B 274 NLDGSHRK 281 (386)
T ss_dssp CTTSCSCE
T ss_pred eCCCCeeE
Confidence 88654433
No 251
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=4.9e-05 Score=60.58 Aligned_cols=146 Identities=12% Similarity=0.192 Sum_probs=94.9
Q ss_pred eEEEEEEcC-CCCEEEEEeC-CCcEEEEeCCCCcEEEEEecCC---ceEEEEEE-------CCCCCEEEEeeCCC-----
Q psy10953 13 DMWNVVFSP-DDKYVLSGSQ-SGKINLYGVETGKLEQIFDTRG---KFTLSIAY-------STDGHWIASGALDG----- 75 (181)
Q Consensus 13 ~~~~~~~s~-~g~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~-------s~d~~~l~~~~~d~----- 75 (181)
....|+|+| ++..|+.+.. .+.|++.|.+++++..+..... .....++| +++|++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 357899999 4555554443 4679999999888877654321 12468999 99999666665443
Q ss_pred --cEEEEeCCC--CCc-----------ccEEEEEEcC-CCCEEEEEeCCCcEEEEecC-------CCce-----------
Q psy10953 76 --IINIFDANT--GHS-----------SWVLSTAFTR-DGKFFISASADHTVRVWNFA-------RREN----------- 121 (181)
Q Consensus 76 --~v~i~d~~~--~~~-----------~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~-------~~~~----------- 121 (181)
.+.+++... ... .....++++| ++.++++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366776433 111 1124567889 45666677778889999987 4432
Q ss_pred ---eeeeecCCcEEEEEEccCCCEE-EEEcCCCcEEEEeCC
Q psy10953 122 ---MHTFKHADQVWCVCVAPDGDKF-VSVGEDKAVHMYSYK 158 (181)
Q Consensus 122 ---~~~~~~~~~v~~~~~sp~g~~l-~~~~~d~~v~i~~~~ 158 (181)
+...........++|+|+|+.+ ++=...+.|+.++..
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1111223446789999999964 444567789986654
No 252
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.35 E-value=4.4e-06 Score=64.32 Aligned_cols=130 Identities=8% Similarity=-0.141 Sum_probs=84.8
Q ss_pred CCCEEEEE-eCCC----cEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----------CCCcEEEEeCCCCC
Q psy10953 22 DDKYVLSG-SQSG----KINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----------LDGIINIFDANTGH 86 (181)
Q Consensus 22 ~g~~l~~~-~~d~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----------~d~~v~i~d~~~~~ 86 (181)
+..+++.. ..+. +|.++|..+++.+..+...... .+.++||+++++.+. .++.|.+||+.+..
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 43445443 3344 8889999999999888764443 699999999888775 36889999998653
Q ss_pred cc---------------cEEEEEEcCCCCEEEEEeC--CCcEEE--EecCCCceeeeeecCCcEEEEEEccCCC-EEEEE
Q psy10953 87 SS---------------WVLSTAFTRDGKFFISASA--DHTVRV--WNFARRENMHTFKHADQVWCVCVAPDGD-KFVSV 146 (181)
Q Consensus 87 ~~---------------~v~~~~~s~~~~~l~~~~~--d~~i~v--~d~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~ 146 (181)
.. ....++++|||++++.+.. +..+.+ +|..+ +..+...+. ..+.|+|+ .+++.
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLG 181 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEE
Confidence 21 2346789999998887764 456888 88876 334433222 11234433 33444
Q ss_pred cCCCcEEEEeCCC
Q psy10953 147 GEDKAVHMYSYKP 159 (181)
Q Consensus 147 ~~d~~v~i~~~~~ 159 (181)
+.|+.+.+.++.+
T Consensus 182 ~~dg~~~~vd~~~ 194 (368)
T 1mda_H 182 SCPASLAASDLAA 194 (368)
T ss_dssp CCTTSCEEEECCS
T ss_pred cCCCCEEEEECcc
Confidence 4556655566554
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.34 E-value=0.00033 Score=52.06 Aligned_cols=144 Identities=13% Similarity=0.156 Sum_probs=90.3
Q ss_pred eEEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCcEEEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSG--KINLYGVETGKLEQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~--~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---- 85 (181)
....++++++|+++++..... .|..+|..++++...... .......++..+++..+++-..++.++.+|...+
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v 152 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 152 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeE
Confidence 467899999999666554332 477778788887654432 2233345555555554454445788888887532
Q ss_pred --------------CcccEEEEEEcCCCCE-EEEEeCCCcEEEEecCC-Cce--eeeeecCCcEEEEEEccCCCEEEEEc
Q psy10953 86 --------------HSSWVLSTAFTRDGKF-FISASADHTVRVWNFAR-REN--MHTFKHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 86 --------------~~~~v~~~~~s~~~~~-l~~~~~d~~i~v~d~~~-~~~--~~~~~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
.......+ +|+++. +++-...+.|+.|++.. +.. ...+........++++++|+.+++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECB
T ss_pred EEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeC
Confidence 01124445 788864 45555678899999864 221 11121123456789999998877766
Q ss_pred CCCcEEEEeCC
Q psy10953 148 EDKAVHMYSYK 158 (181)
Q Consensus 148 ~d~~v~i~~~~ 158 (181)
..+.|.+++..
T Consensus 231 ~~~~V~~~~~~ 241 (306)
T 2p4o_A 231 IYNSVVRIAPD 241 (306)
T ss_dssp TTCCEEEECTT
T ss_pred CCCeEEEECCC
Confidence 67889998865
No 254
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.33 E-value=6.4e-06 Score=68.25 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=87.8
Q ss_pred CCC---CEEEEEeCCCcEEEEeCCCCcEEEEEecCC-----------ceE------------------------EEEEEC
Q psy10953 21 PDD---KYVLSGSQSGKINLYGVETGKLEQIFDTRG-----------KFT------------------------LSIAYS 62 (181)
Q Consensus 21 ~~g---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----------~~~------------------------~~~~~s 62 (181)
.+| ..++.++.+|.+.++|.++|+++..+.... ..+ ..++++
T Consensus 322 ~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d 401 (677)
T 1kb0_A 322 IAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN 401 (677)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE
T ss_pred cCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc
Confidence 367 678899999999999999999875543211 111 146788
Q ss_pred CCCCEEEEeeC-------------------------------------------CCcEEEEeCCCCCccc-------EEE
Q psy10953 63 TDGHWIASGAL-------------------------------------------DGIINIFDANTGHSSW-------VLS 92 (181)
Q Consensus 63 ~d~~~l~~~~~-------------------------------------------d~~v~i~d~~~~~~~~-------v~~ 92 (181)
|++.++++... .+.+..||+.+++..+ +..
T Consensus 402 p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~ 481 (677)
T 1kb0_A 402 PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNG 481 (677)
T ss_dssp TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCC
T ss_pred CCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcC
Confidence 98887776533 1678899998765322 222
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcE--EEEEEccCCCEEEEE
Q psy10953 93 TAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQV--WCVCVAPDGDKFVSV 146 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v--~~~~~sp~g~~l~~~ 146 (181)
..+..++.+++.++.++.+++||.++++.+.++.....+ .-+.++++|+.+++.
T Consensus 482 g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 482 GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred cceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 345567778888999999999999999999888744322 224456888765543
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.32 E-value=4.7e-05 Score=61.85 Aligned_cols=147 Identities=12% Similarity=0.138 Sum_probs=98.5
Q ss_pred EEEcCCCCEEEEEeCC----------------CcEEEEeCCCCcEEEEEecCC----------ceEEEEEECCCCC---E
Q psy10953 17 VVFSPDDKYVLSGSQS----------------GKINLYGVETGKLEQIFDTRG----------KFTLSIAYSTDGH---W 67 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d----------------~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~s~d~~---~ 67 (181)
+++.++...++.+..+ +.|..+|.++|+.+-.++... ..+ -+...++|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEE
Confidence 5566766677665532 359999999999886665421 111 122234674 5
Q ss_pred EEEeeCCCcEEEEeCCCCCccc---------------------E--------------------------EEEEEcCCCC
Q psy10953 68 IASGALDGIINIFDANTGHSSW---------------------V--------------------------LSTAFTRDGK 100 (181)
Q Consensus 68 l~~~~~d~~v~i~d~~~~~~~~---------------------v--------------------------~~~~~s~~~~ 100 (181)
++.++.+|.++.+|..+++..+ + ..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 6778889999999987653211 0 1246777766
Q ss_pred EEEEEe-------------------------------------CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEE
Q psy10953 101 FFISAS-------------------------------------ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 101 ~l~~~~-------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l 143 (181)
++.... .++.++.||+.+++...++.....+++..+...+..+
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v 478 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLV 478 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEE
Confidence 554432 3478999999999988887655544444444456777
Q ss_pred EEEcCCCcEEEEeCCCCeeEE
Q psy10953 144 VSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 144 ~~~~~d~~v~i~~~~~~~~~~ 164 (181)
+.++.|+.++.+|..+++++-
T Consensus 479 ~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 479 WYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEE
T ss_pred EEEcCCCeEEEEECCCCCEEE
Confidence 778999999999999988763
No 256
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.32 E-value=2.9e-05 Score=59.23 Aligned_cols=139 Identities=13% Similarity=0.134 Sum_probs=91.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC---------ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRG---------KFTLSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLS 92 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---------~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~ 92 (181)
++..+++++.++.|..+|.++++.+-.+.... ..+ ......++..++.++.++.+..+|..++...+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALL-SGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCE-EEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccc-ccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 45677788889999999999999875555421 111 11222245667788889999999998775432211
Q ss_pred EE----EcC--CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEE------EEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 93 TA----FTR--DGKFFISASADHTVRVWNFARRENMHTFKHADQVW------CVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 93 ~~----~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~------~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
+. -+| .+..++.++.++.++.+|..+++.+........+. ..+.. +..++.+..++.+..++..++
T Consensus 131 ~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 131 VAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp CSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTC
T ss_pred CCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCC
Confidence 10 001 13456677889999999999998887766433321 12222 456777888899999999888
Q ss_pred eeE
Q psy10953 161 EEV 163 (181)
Q Consensus 161 ~~~ 163 (181)
+.+
T Consensus 209 ~~~ 211 (376)
T 3q7m_A 209 QMI 211 (376)
T ss_dssp CEE
T ss_pred cEE
Confidence 765
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.30 E-value=6.5e-05 Score=61.38 Aligned_cols=146 Identities=14% Similarity=0.168 Sum_probs=97.1
Q ss_pred EEEcCCCCEEEEEeCC----------------CcEEEEeCCCCcEEEEEecCCc----------eEEEEEEC-CCC---C
Q psy10953 17 VVFSPDDKYVLSGSQS----------------GKINLYGVETGKLEQIFDTRGK----------FTLSIAYS-TDG---H 66 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d----------------~~i~~~d~~~~~~~~~~~~~~~----------~~~~~~~s-~d~---~ 66 (181)
.++.++..+++.+..+ ..|..+|.++|+.+-.++.... .+ -+... .+| +
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEE
Confidence 4566777777776654 3799999999999876665321 11 12222 567 4
Q ss_pred EEEEeeCCCcEEEEeCCCCCccc---------------------E--------------------------EEEEEcCCC
Q psy10953 67 WIASGALDGIINIFDANTGHSSW---------------------V--------------------------LSTAFTRDG 99 (181)
Q Consensus 67 ~l~~~~~d~~v~i~d~~~~~~~~---------------------v--------------------------~~~~~s~~~ 99 (181)
.++.++.+|.++++|..+++..+ + ..++++|+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC
Confidence 56778899999999987654211 0 124566665
Q ss_pred CEEEEEe---------------------------------------CCCcEEEEecCCCceeeeeecCCcEEEEEEccCC
Q psy10953 100 KFFISAS---------------------------------------ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDG 140 (181)
Q Consensus 100 ~~l~~~~---------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g 140 (181)
+++.... ..+.++-||+.+++.+.+.+...+.++-.+...+
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag 484 (599)
T 1w6s_A 405 ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAG 484 (599)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETT
T ss_pred CEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecC
Confidence 5443321 3467889999999888777654433332233456
Q ss_pred CEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 141 DKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 141 ~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
..++.++.|+.++.||..+++++
T Consensus 485 g~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 485 DLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp TEEEEECTTSEEEEEETTTCCEE
T ss_pred CEEEEECCCCeEEEEECCCCCEE
Confidence 77777899999999999888765
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.29 E-value=0.00049 Score=51.10 Aligned_cols=143 Identities=10% Similarity=0.091 Sum_probs=90.1
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC-C-cEEEEeCCCCCc---
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD-G-IINIFDANTGHS--- 87 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d-~-~v~i~d~~~~~~--- 87 (181)
....++|+++|+++++-...+.|..||..+ +....+... .....++++++|+++++.... + .+..+|..++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~-~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVE-GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECS-SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCC-CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 356899999999777766789999998765 444444433 345689999999966654332 2 466677654431
Q ss_pred ------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc-eeee--------e--ecCCcEEEEEEccCCCEEEEEc-CC
Q psy10953 88 ------SWVLSTAFTRDGKFFISASADHTVRVWNFARRE-NMHT--------F--KHADQVWCVCVAPDGDKFVSVG-ED 149 (181)
Q Consensus 88 ------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~-~~~~--------~--~~~~~v~~~~~sp~g~~l~~~~-~d 149 (181)
.....++..++++.+++-..++.|+++|...+. .+.. . ..-...+.+ +|++++++.+. ..
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 122344445555556655568899999986542 1110 0 011234555 88888765554 56
Q ss_pred CcEEEEeCCC
Q psy10953 150 KAVHMYSYKP 159 (181)
Q Consensus 150 ~~v~i~~~~~ 159 (181)
+.|..|++..
T Consensus 189 ~~I~~~~~~~ 198 (306)
T 2p4o_A 189 MLLLRIPVDS 198 (306)
T ss_dssp TEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 7899999864
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.25 E-value=6.6e-05 Score=61.15 Aligned_cols=147 Identities=14% Similarity=0.257 Sum_probs=97.0
Q ss_pred EEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCcEEEEEecCC----------ceEEEEEE
Q psy10953 16 NVVFSPDDKYVLSGSQ--------------------S----GKINLYGVETGKLEQIFDTRG----------KFTLSIAY 61 (181)
Q Consensus 16 ~~~~s~~g~~l~~~~~--------------------d----~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~ 61 (181)
..+++|+..+++.+.. | +.|..+|.++|+.+-.++... ..+ -+..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEee
Confidence 3567777777776552 2 589999999999987665421 111 1222
Q ss_pred C-CCCC---EEEEeeCCCcEEEEeCCCCCccc----------E-------------------------------------
Q psy10953 62 S-TDGH---WIASGALDGIINIFDANTGHSSW----------V------------------------------------- 90 (181)
Q Consensus 62 s-~d~~---~l~~~~~d~~v~i~d~~~~~~~~----------v------------------------------------- 90 (181)
. .+|+ .++.++.+|.++.+|..+++..+ .
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 1 4674 67788999999999987653210 0
Q ss_pred ------EEEEEcCCCCEEEEEe---------------------------------CCCcEEEEecCCCceeeeeecCCcE
Q psy10953 91 ------LSTAFTRDGKFFISAS---------------------------------ADHTVRVWNFARRENMHTFKHADQV 131 (181)
Q Consensus 91 ------~~~~~s~~~~~l~~~~---------------------------------~d~~i~v~d~~~~~~~~~~~~~~~v 131 (181)
..++++|+...+.... .++.++-||+.+++...+.+.....
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~ 488 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL 488 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC
Confidence 0235566544333321 2578999999999988777654444
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 132 WCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 132 ~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
+...+...+..++.++.|+.++.||..+++++
T Consensus 489 ~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 489 WAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 43333335677888999999999999998776
No 260
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.21 E-value=6.3e-05 Score=62.44 Aligned_cols=142 Identities=18% Similarity=0.279 Sum_probs=94.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-C-ceEEEEEECC---CCCEEEEee------CCCcEEEEeCCCCCcccE
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTR-G-KFTLSIAYST---DGHWIASGA------LDGIINIFDANTGHSSWV 90 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~s~---d~~~l~~~~------~d~~v~i~d~~~~~~~~v 90 (181)
++..+++++.|+.|..+|.++|+.+-.+... . .....+..+| ++. ++.+. .++.++.||+.++...+.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 4567888889999999999999988665542 1 0000111122 444 44443 368899999887653221
Q ss_pred ---------------------------------------EEEEEcCCCCEEEEEeCCC-------------------cEE
Q psy10953 91 ---------------------------------------LSTAFTRDGKFFISASADH-------------------TVR 112 (181)
Q Consensus 91 ---------------------------------------~~~~~s~~~~~l~~~~~d~-------------------~i~ 112 (181)
..++++|++..+..++.++ .|.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 1356788888887777665 399
Q ss_pred EEecCCCceeeeeec--C--------CcEEEEEEccCCC---EEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 113 VWNFARRENMHTFKH--A--------DQVWCVCVAPDGD---KFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 113 v~d~~~~~~~~~~~~--~--------~~v~~~~~sp~g~---~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
.+|.++++....++. . ..+....+..+|+ .++.++.++.++++|..+|+.+.
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEec
Confidence 999999998877652 1 1122222333665 68888899999999999998763
No 261
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.21 E-value=0.00033 Score=51.09 Aligned_cols=144 Identities=12% Similarity=0.140 Sum_probs=91.5
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE---EEEEec------CCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL---EQIFDT------RGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~---~~~~~~------~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
.+.-.|++.+++.++++.-.++.+.++++..... ...... ...-...++++|+++.|.++....-..+|..
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 4556788888998777766778899998764432 222211 1122368999999987777665444344433
Q ss_pred CC------------------CCcccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeeecC----------CcEEE
Q psy10953 83 NT------------------GHSSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFKHA----------DQVWC 133 (181)
Q Consensus 83 ~~------------------~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~----------~~v~~ 133 (181)
.. .......+++++|.. ++++.+...+.+..+|.... .+..+... ....+
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEG 228 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEG 228 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEE
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCe
Confidence 21 011234678899964 56666667788999997643 44444322 25789
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
++|.|+|+.+++ ++-+.++.+.-
T Consensus 229 ia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 229 VAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEECTTCCEEEE-ETTTEEEEEEC
T ss_pred eEECCCCCEEEE-cCCceEEEEEe
Confidence 999999985554 66677777654
No 262
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.18 E-value=0.00017 Score=54.91 Aligned_cols=135 Identities=12% Similarity=0.092 Sum_probs=83.4
Q ss_pred EEEEEeCCCcEEEEeCCCCcEEEEEecCCceE-----EEEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEE------
Q psy10953 25 YVLSGSQSGKINLYGVETGKLEQIFDTRGKFT-----LSIAYSTDGHWIASGALDGIINIFDANTGHSSWVLST------ 93 (181)
Q Consensus 25 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~-----~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~------ 93 (181)
.++.++.++.+..+|.++++....+....... ..... ++..++.+..++.+..+|..++...+....
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 222 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGS 222 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC----
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCC
Confidence 45556666677777777676654443322110 01111 134567778888999999877654322211
Q ss_pred ---------EEcC--CCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCee
Q psy10953 94 ---------AFTR--DGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 94 ---------~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~ 162 (181)
.-.| .+..+..++.++.++.+|..+++.+...... ....+.. ++..++.++.++.+..++..+++.
T Consensus 223 ~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 223 TEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG-SVNDFIV--DGNRIYLVDQNDRVMALTIDGGVT 299 (376)
T ss_dssp -------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC-CEEEEEE--ETTEEEEEETTCCEEEEETTTCCE
T ss_pred cccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC-CCCCceE--ECCEEEEEcCCCeEEEEECCCCcE
Confidence 1112 2455666778899999999998877665533 2334443 466788888889999999988876
Q ss_pred EE
Q psy10953 163 VE 164 (181)
Q Consensus 163 ~~ 164 (181)
+-
T Consensus 300 ~w 301 (376)
T 3q7m_A 300 LW 301 (376)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 263
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.18 E-value=7.5e-05 Score=55.47 Aligned_cols=127 Identities=17% Similarity=0.229 Sum_probs=85.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc--------ccEEEEE
Q psy10953 23 DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS--------SWVLSTA 94 (181)
Q Consensus 23 g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~--------~~v~~~~ 94 (181)
+..++.++.++.+..+|.. ++....+......+.++...+++. +..+..++.+..+|.. +.. ..+..+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 5567778888999999988 776655554444444566677777 5557777889999987 432 2234456
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 95 FTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 95 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
.+++++.++.. +.+..+| .+++...... ....+.+++++++|+.. .++.++.+..++.
T Consensus 184 ~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 184 IGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINP 242 (330)
T ss_dssp ECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEECT
T ss_pred EcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEECC
Confidence 66778866544 7899999 6666555554 33457778888887544 4666777888764
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.14 E-value=0.0015 Score=50.63 Aligned_cols=153 Identities=6% Similarity=-0.032 Sum_probs=95.2
Q ss_pred CeeeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCC----cEEEEEecCCceEEEEEECCCCCEEE-EeeCCCcEEEEeCC
Q psy10953 10 GPVDMWNVVFSPDDKYVL-SGSQSGKINLYGVETG----KLEQIFDTRGKFTLSIAYSTDGHWIA-SGALDGIINIFDAN 83 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~s~d~~~l~-~~~~d~~v~i~d~~ 83 (181)
.......++|++.++.|+ +-...+.|+.+++... .....+...-.....+++++.+..|+ +-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 344567899998666554 4445678888888652 23333332223345788887555454 44557788888886
Q ss_pred CCC--------cccEEEEEEcCCCCEEEEEe-C-CCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCc
Q psy10953 84 TGH--------SSWVLSTAFTRDGKFFISAS-A-DHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKA 151 (181)
Q Consensus 84 ~~~--------~~~v~~~~~s~~~~~l~~~~-~-d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~ 151 (181)
... ......++++|.+..|.... . .+.|...++.......... .-.....++++|+++.|+.+. ..+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 432 23467889999655444443 2 3688888886543322222 224688999998877766554 4678
Q ss_pred EEEEeCCCCee
Q psy10953 152 VHMYSYKPEEE 162 (181)
Q Consensus 152 v~i~~~~~~~~ 162 (181)
|..+++.....
T Consensus 270 I~~~d~dG~~~ 280 (400)
T 3p5b_L 270 ISSIDVNGGNR 280 (400)
T ss_dssp EEEEETTSCCC
T ss_pred EEEEeCCCCcc
Confidence 99999865443
No 265
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.11 E-value=0.00071 Score=51.54 Aligned_cols=139 Identities=15% Similarity=0.219 Sum_probs=79.3
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec-----CCceEEEEEECCC---CCEEEEeeC-C
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT-----RGKFTLSIAYSTD---GHWIASGAL-D 74 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~s~d---~~~l~~~~~-d 74 (181)
+..+.......+.++|.|||++++ +..++.|++++ +++....... .......++++|+ +..|+.... .
T Consensus 23 ~~~va~~l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp EEEEECCCSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEECCCCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 444555555678999999998554 45679999998 4543322111 1223568999998 544444322 2
Q ss_pred -----CcEEEEeCCCC-----------------CcccEEEEEEcCCCCEEEEEeCC-------------CcEEEEecCCC
Q psy10953 75 -----GIINIFDANTG-----------------HSSWVLSTAFTRDGKFFISASAD-------------HTVRVWNFARR 119 (181)
Q Consensus 75 -----~~v~i~d~~~~-----------------~~~~v~~~~~s~~~~~l~~~~~d-------------~~i~v~d~~~~ 119 (181)
+.|..++.... .......++|.|+|.++++.+.. +.|.-++....
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 45666654321 00122468899999877775421 45665655320
Q ss_pred --------------ceeeeeecCCcEEEEEEcc-CCCEEEEE
Q psy10953 120 --------------ENMHTFKHADQVWCVCVAP-DGDKFVSV 146 (181)
Q Consensus 120 --------------~~~~~~~~~~~v~~~~~sp-~g~~l~~~ 146 (181)
..+....+ ...+.++|+| +|+.+++-
T Consensus 180 ~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEE
T ss_pred CCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEE
Confidence 01111112 2367899999 56655543
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.08 E-value=0.0018 Score=49.26 Aligned_cols=148 Identities=9% Similarity=0.047 Sum_probs=93.4
Q ss_pred EEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee-CC-CcEEEEeCCCC-----
Q psy10953 14 MWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA-LD-GIINIFDANTG----- 85 (181)
Q Consensus 14 ~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-~d-~~v~i~d~~~~----- 85 (181)
...+++.+.+..| ++-...+.|.+.++........+...-.....++++|++..|+... .. +.|..++....
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 197 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 4678888755544 5555677899999875544444433323346899998766555443 33 67888876532
Q ss_pred ---CcccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 86 ---HSSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 86 ---~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
.......++++|++. ++++-+..+.|..+|+.......... ......++++ ..+..+++-...+.|..++..++
T Consensus 198 ~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 198 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence 123578999998665 44555556789999986543222222 2345677888 35556666666788988885555
Q ss_pred ee
Q psy10953 161 EE 162 (181)
Q Consensus 161 ~~ 162 (181)
..
T Consensus 277 ~~ 278 (349)
T 3v64_C 277 KN 278 (349)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.06 E-value=0.0017 Score=48.52 Aligned_cols=151 Identities=10% Similarity=0.045 Sum_probs=96.1
Q ss_pred eEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC--CcEEEEeCCCC----
Q psy10953 13 DMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD--GIINIFDANTG---- 85 (181)
Q Consensus 13 ~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d--~~v~i~d~~~~---- 85 (181)
....+++++.++.| ++-...+.|.+++.........+.........++++|++..|+..... +.|...+....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~ 157 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 157 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE
Confidence 34678888755544 555667899999987655444444333345688999876655554432 67888876532
Q ss_pred ----CcccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 86 ----HSSWVLSTAFTRDGKFF-ISASADHTVRVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 86 ----~~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
.......++++|++..| ++-+..+.|..+|+.......... ......++++. .+..+++-...+.|..++.
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 12356789999876544 444456789999986432221111 12346788885 4556666666789999987
Q ss_pred CCCeeEE
Q psy10953 158 KPEEEVE 164 (181)
Q Consensus 158 ~~~~~~~ 164 (181)
.++..++
T Consensus 237 ~~g~~~~ 243 (316)
T 1ijq_A 237 LTGSDVN 243 (316)
T ss_dssp TTCCCCE
T ss_pred CCCcceE
Confidence 6665443
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.05 E-value=0.0018 Score=48.36 Aligned_cols=148 Identities=6% Similarity=-0.036 Sum_probs=90.3
Q ss_pred eEEEEEEcCCCCEE-EEEeCCCcEEEEeCCC----CcEEEEEecCCceEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCC
Q psy10953 13 DMWNVVFSPDDKYV-LSGSQSGKINLYGVET----GKLEQIFDTRGKFTLSIAYSTDGHWIA-SGALDGIINIFDANTGH 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~s~d~~~l~-~~~~d~~v~i~d~~~~~ 86 (181)
....++|+++++.| ++-...+.|..++..+ ......+...-.....+++++.+..|+ +-...+.|.++++....
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 35688999876655 4555568899999876 222233322212234788886555454 44567788888876432
Q ss_pred --------cccEEEEEEcCCCCEEEEEeC-C-CcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCcEEE
Q psy10953 87 --------SSWVLSTAFTRDGKFFISASA-D-HTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKAVHM 154 (181)
Q Consensus 87 --------~~~v~~~~~s~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v~i 154 (181)
......++++|.+..+..+.. . +.|..+++.......... .-.....++++|+++.|+.+. ..+.|..
T Consensus 111 ~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 111 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence 234678899986554444443 3 678888875432221111 234578999999877665554 5678999
Q ss_pred EeCCCC
Q psy10953 155 YSYKPE 160 (181)
Q Consensus 155 ~~~~~~ 160 (181)
+++...
T Consensus 191 ~d~dg~ 196 (316)
T 1ijq_A 191 IDVNGG 196 (316)
T ss_dssp EETTSC
T ss_pred EecCCC
Confidence 998643
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.04 E-value=0.00061 Score=53.35 Aligned_cols=144 Identities=11% Similarity=0.149 Sum_probs=89.6
Q ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCC-----
Q psy10953 14 MWNVVFSP-DDKYVLSGSQSGKINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIAS-GALDGIINIFDANTG----- 85 (181)
Q Consensus 14 ~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~----- 85 (181)
...++++| +|.++++-...+.|..++..++......... ......++++|+|++|+. -...+.|..++....
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~ 307 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLT 307 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccccc
Confidence 46788999 6666666667789999998877653433332 223458999999995554 455678888765321
Q ss_pred ----------C------------cccEE-EEEEc--------CCCCEEEEEeCCCcEEEEecCCCceeeeeec-------
Q psy10953 86 ----------H------------SSWVL-STAFT--------RDGKFFISASADHTVRVWNFARRENMHTFKH------- 127 (181)
Q Consensus 86 ----------~------------~~~v~-~~~~s--------~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------- 127 (181)
. -.... .++.. ++|.++++-...+.|+.++. ++........
T Consensus 308 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G 386 (430)
T 3tc9_A 308 TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSG 386 (430)
T ss_dssp CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSS
T ss_pred ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCc
Confidence 0 01122 34442 44666666666778888874 3432222111
Q ss_pred -----------CCcEEEEEEccC-CCEEEEEcCCCcEEEEeCC
Q psy10953 128 -----------ADQVWCVCVAPD-GDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 128 -----------~~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~ 158 (181)
-...+.++++|+ +..+++-..++.|+.++.+
T Consensus 387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 124789999995 6556655567788887753
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.03 E-value=0.00075 Score=52.93 Aligned_cols=144 Identities=17% Similarity=0.151 Sum_probs=94.2
Q ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcE-EEEEecC-CceEEEEEECCCCCEEEEe-eCCCcEEEEeCC--CCC-
Q psy10953 14 MWNVVFSP-DDKYVLSGSQSGKINLYGVETGKL-EQIFDTR-GKFTLSIAYSTDGHWIASG-ALDGIINIFDAN--TGH- 86 (181)
Q Consensus 14 ~~~~~~s~-~g~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~-~~~~~~~~~s~d~~~l~~~-~~d~~v~i~d~~--~~~- 86 (181)
...++++| +|.+.++-..++.|+.+|..++.. ...+... ......++++|+|++|+.+ ...+.|..++.. ++.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 35688999 666555655678899999887876 3333221 1222369999999965554 456788887753 110
Q ss_pred ------------------------cccEEEEEE---------cCCCCEEEEEeCCCcEEEEecCCCceeeeeec------
Q psy10953 87 ------------------------SSWVLSTAF---------TRDGKFFISASADHTVRVWNFARRENMHTFKH------ 127 (181)
Q Consensus 87 ------------------------~~~v~~~~~---------s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------ 127 (181)
-.....+++ .++|+++++-...+.|+.++. ++........
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~ 388 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREW 388 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSS
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCcc
Confidence 123566888 788888888777888999985 3332211110
Q ss_pred ------------CCcEEEEEEc-cCCCEEEEEcCCCcEEEEeCC
Q psy10953 128 ------------ADQVWCVCVA-PDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 128 ------------~~~v~~~~~s-p~g~~l~~~~~d~~v~i~~~~ 158 (181)
-...++++++ ++|+.+++=..++.|+.++++
T Consensus 389 G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 389 GYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1247899999 677666666667888887763
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.00 E-value=0.0019 Score=47.06 Aligned_cols=150 Identities=15% Similarity=0.178 Sum_probs=95.5
Q ss_pred CeeeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCC-ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC--
Q psy10953 10 GPVDMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRG-KFTLSIAYSTDGHWIASGALDGIINIFDANTG-- 85 (181)
Q Consensus 10 ~~~~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~-- 85 (181)
-...++.++++|+++.|+ +...++.|...|.. +++.+.+...+ .....+++.+++.++++.-.++.+.++++...
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 334689999999877665 46677889999988 88877765432 23457888888876666555667777765321
Q ss_pred ---------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC---Cceeeeee--------cCCcEEEEEEccC
Q psy10953 86 ---------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFAR---RENMHTFK--------HADQVWCVCVAPD 139 (181)
Q Consensus 86 ---------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~--------~~~~v~~~~~sp~ 139 (181)
.+.....++|+|.++.|.++.......+|.+.. ...+.... ....+.+++++|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 122246899999987666555544545554431 11111111 1235678999997
Q ss_pred CCEEEEEc-CCCcEEEEeCCCC
Q psy10953 140 GDKFVSVG-EDKAVHMYSYKPE 160 (181)
Q Consensus 140 g~~l~~~~-~d~~v~i~~~~~~ 160 (181)
...++..| ..+.+..+|....
T Consensus 184 tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTCC
T ss_pred CCeEEEEECCCCeEEEEcCCCC
Confidence 66554444 5678888887644
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.00033 Score=57.94 Aligned_cols=142 Identities=15% Similarity=0.181 Sum_probs=92.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCc-eEEEEEECC--CCCEEEEeeC------CCcEEEEeCCCCCcccEE-
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGK-FTLSIAYST--DGHWIASGAL------DGIINIFDANTGHSSWVL- 91 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~--d~~~l~~~~~------d~~v~i~d~~~~~~~~v~- 91 (181)
.+..++.++.|+.|..+|.++|+.+-.+..... ....+.-+| .+..++.+.. ++.++.+|+.++...+..
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 355677888899999999999998866554210 000011111 1334444432 588999998766432211
Q ss_pred --------------------------------------EEEEcCCCCEEEEEeCCC-------------------cEEEE
Q psy10953 92 --------------------------------------STAFTRDGKFFISASADH-------------------TVRVW 114 (181)
Q Consensus 92 --------------------------------------~~~~s~~~~~l~~~~~d~-------------------~i~v~ 114 (181)
.++++|+...+..++.++ .|.-+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 256777777777776655 39999
Q ss_pred ecCCCceeeeeecC----------CcEEEEEEccCCC---EEEEEcCCCcEEEEeCCCCeeE
Q psy10953 115 NFARRENMHTFKHA----------DQVWCVCVAPDGD---KFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 115 d~~~~~~~~~~~~~----------~~v~~~~~sp~g~---~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
|.++++....++.. .+.....+..+|+ .++.++.++.++++|..+|+.+
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 99999988777521 2233333334675 6888889999999999998876
No 273
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.96 E-value=0.00017 Score=53.51 Aligned_cols=139 Identities=16% Similarity=0.149 Sum_probs=88.4
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC--------
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH-------- 86 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~-------- 86 (181)
..+...++|. ++.++.++.+..+|.. ++....+......+.++...+++...+.. +.+..+| .++.
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~ 213 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAG 213 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCS
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccC
Confidence 4455566666 6667778999999998 77766555544444456777788755443 7788888 4332
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCc-EEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy10953 87 SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQ-VWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 87 ~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~ 163 (181)
...+.++..+++|+..+ ++.++.+..+|. ++..+..+..... +..+.+.+++ .++.++.++.+..++. +++.+
T Consensus 214 ~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~ 287 (330)
T 3hxj_A 214 YWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEK 287 (330)
T ss_dssp SCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEE
T ss_pred CcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEE
Confidence 12355667778877554 555778888874 4555555543222 3345555565 5666777888999985 45443
No 274
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.96 E-value=0.0028 Score=47.58 Aligned_cols=149 Identities=7% Similarity=0.023 Sum_probs=93.4
Q ss_pred EEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee--CCCcEEEEeCCCCC----
Q psy10953 14 MWNVVFSPDDK-YVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA--LDGIINIFDANTGH---- 86 (181)
Q Consensus 14 ~~~~~~s~~g~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~--~d~~v~i~d~~~~~---- 86 (181)
...+++.+.+. +.++-...+.|.++++.......++.........++++|.+..|+... ..+.|...+.....
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 35688887444 445555677899999875544344333333346889998766665554 35778888765321
Q ss_pred ----cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 87 ----SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 87 ----~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
......++++|++. ++++=+..+.|..+|+.......... ......++++. .+..+++-...+.|..++..++
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCC
Confidence 23468899999655 44554557889999986433222222 23456678875 3455666666788999998666
Q ss_pred eeE
Q psy10953 161 EEV 163 (181)
Q Consensus 161 ~~~ 163 (181)
+..
T Consensus 240 ~~~ 242 (318)
T 3sov_A 240 EGL 242 (318)
T ss_dssp CSC
T ss_pred Cce
Confidence 543
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.95 E-value=0.0023 Score=49.27 Aligned_cols=149 Identities=8% Similarity=0.035 Sum_probs=93.2
Q ss_pred EEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC-C-CcEEEEeCCCCC----
Q psy10953 14 MWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL-D-GIINIFDANTGH---- 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-d-~~v~i~d~~~~~---- 86 (181)
...+++++.+..| ++-...+.|.+.++.......++...-.....++++|++..|+.... . +.|..++.....
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 3568888755544 55555678888887755443444333234568899987766655443 3 678888775321
Q ss_pred ----cccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCC
Q psy10953 87 ----SSWVLSTAFTRDGK-FFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 87 ----~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~ 160 (181)
......++++|++. ++++-+..+.|..+|+.......... ......++++ ..+..+++-...+.|..++..++
T Consensus 241 ~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 241 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 23468899998655 44555556789999986533222222 2345678888 45556666667788999885555
Q ss_pred eeE
Q psy10953 161 EEV 163 (181)
Q Consensus 161 ~~~ 163 (181)
..+
T Consensus 320 ~~~ 322 (386)
T 3v65_B 320 KNQ 322 (386)
T ss_dssp CSC
T ss_pred cce
Confidence 443
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.95 E-value=0.00069 Score=56.73 Aligned_cols=140 Identities=11% Similarity=0.157 Sum_probs=78.9
Q ss_pred EEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCcEE--EEEec-CCceEEEEEECCCCCEEEEee---CCCcEEEEeCC
Q psy10953 15 WNVVFSPDDKYVLSGSQS-----GKINLYGVETGKLE--QIFDT-RGKFTLSIAYSTDGHWIASGA---LDGIINIFDAN 83 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d-----~~i~~~d~~~~~~~--~~~~~-~~~~~~~~~~s~d~~~l~~~~---~d~~v~i~d~~ 83 (181)
..++|+|||+.|+....| ..|..+++.+++.. .++.. ...+...+.|||||++|+... ....++++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 468899999988877665 25888888776422 33332 233455789999999988654 24467888886
Q ss_pred CCCcc------------cEEEEEEcCCCCE-EEEEeCC----CcEEEEecCCC-ceee-eeecCC--cEEEEEEccCCCE
Q psy10953 84 TGHSS------------WVLSTAFTRDGKF-FISASAD----HTVRVWNFARR-ENMH-TFKHAD--QVWCVCVAPDGDK 142 (181)
Q Consensus 84 ~~~~~------------~v~~~~~s~~~~~-l~~~~~d----~~i~v~d~~~~-~~~~-~~~~~~--~v~~~~~sp~g~~ 142 (181)
++... ....+.|+. |+. ++....+ ..|..+|+.+. .... .+.+.. .+..+.+ .++.
T Consensus 304 ~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~ 380 (751)
T 2xe4_A 304 KGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNY 380 (751)
T ss_dssp SCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSE
T ss_pred CCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCE
Confidence 54211 112222222 554 4444443 35777777642 2122 233333 2344444 4555
Q ss_pred E-EEEcCCCc--EEEEeC
Q psy10953 143 F-VSVGEDKA--VHMYSY 157 (181)
Q Consensus 143 l-~~~~~d~~--v~i~~~ 157 (181)
| ++...++. +.++++
T Consensus 381 lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 381 LVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCEEEEEEEec
Confidence 5 44455664 455554
No 277
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.94 E-value=0.0034 Score=47.95 Aligned_cols=142 Identities=14% Similarity=0.158 Sum_probs=85.7
Q ss_pred EEEEEcCCCCEEEEEe------------CCCcEEEEeCCC--CcEEEEEecCC-------ceEEEEEECC--CCC--EEE
Q psy10953 15 WNVVFSPDDKYVLSGS------------QSGKINLYGVET--GKLEQIFDTRG-------KFTLSIAYST--DGH--WIA 69 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~------------~d~~i~~~d~~~--~~~~~~~~~~~-------~~~~~~~~s~--d~~--~l~ 69 (181)
=++++.|+|..+.+++ .+|.|.++|..+ .+... +...+ -....+.+.+ ++. .++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~-l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSE-LEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEE-CEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEE-EEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3566788876655542 689999999873 34332 22111 1234566544 454 344
Q ss_pred EeeC--CCcEEEEeCCCC-------------CcccEEEEEEcCCCCEEEEEeC-----------------CCcEEEEecC
Q psy10953 70 SGAL--DGIINIFDANTG-------------HSSWVLSTAFTRDGKFFISASA-----------------DHTVRVWNFA 117 (181)
Q Consensus 70 ~~~~--d~~v~i~d~~~~-------------~~~~v~~~~~s~~~~~l~~~~~-----------------d~~i~v~d~~ 117 (181)
+-.. +..+-+|+.... .-...+++.+.++|+++++... .+.++-+|..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 4333 456667665321 1235788999999998887651 2456556553
Q ss_pred CCceeeeeecCCcEEEEEEccCCCEEEEEc-CCCcEEEEeCCC
Q psy10953 118 RRENMHTFKHADQVWCVCVAPDGDKFVSVG-EDKAVHMYSYKP 159 (181)
Q Consensus 118 ~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~~~ 159 (181)
+.......-...++++||||++.++.+. ..+.|..|++..
T Consensus 212 --~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 212 --DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp --CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred --eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 2222222334578999999998876665 467899999864
No 278
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.93 E-value=0.0044 Score=48.91 Aligned_cols=104 Identities=18% Similarity=0.257 Sum_probs=62.0
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecC--------CceEEEEEECCC---CCEEEEee
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTR--------GKFTLSIAYSTD---GHWIASGA 72 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~s~d---~~~l~~~~ 72 (181)
+..+..+....+.++|.|+|+++++--..+.|++++..+++........ ..-...++|+|| +.+|....
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 4455555667799999999997766544457888876656554332211 122458999995 44444332
Q ss_pred -C------------CCcEEEEeCCC-----------------CCcccEEEEEEcCCCCEEEEEeC
Q psy10953 73 -L------------DGIINIFDANT-----------------GHSSWVLSTAFTRDGKFFISASA 107 (181)
Q Consensus 73 -~------------d~~v~i~d~~~-----------------~~~~~v~~~~~s~~~~~l~~~~~ 107 (181)
. ...|.-++... ........++|.|+|+++++.+.
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1 12344443211 11123577899999998777553
No 279
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.92 E-value=0.00096 Score=50.91 Aligned_cols=139 Identities=13% Similarity=0.168 Sum_probs=78.2
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe-----cCCceEEEEEECCC---CCEEEEe-eC-
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD-----TRGKFTLSIAYSTD---GHWIASG-AL- 73 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~s~d---~~~l~~~-~~- 73 (181)
+..+.......+.++|.|||++++ +..++.|++++ .+++ ..... ........++++|+ +..|+.. ..
T Consensus 21 ~~~va~~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF 97 (354)
T ss_dssp EEEEECSCSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred EEEEeCCCCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc
Confidence 344555555679999999998554 45669999997 4454 22211 11223568999998 4444433 21
Q ss_pred --C----CcEEEEeCCCC--C---------------cccEEEEEEcCCCCEEEEEeCC-------------CcEEEEecC
Q psy10953 74 --D----GIINIFDANTG--H---------------SSWVLSTAFTRDGKFFISASAD-------------HTVRVWNFA 117 (181)
Q Consensus 74 --d----~~v~i~d~~~~--~---------------~~~v~~~~~s~~~~~l~~~~~d-------------~~i~v~d~~ 117 (181)
+ +.|..++.... . ......++|.|+|+++++.+.. +.|.-++..
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 2 45666654322 0 0112457899999987775432 345555543
Q ss_pred CC---------ceeeeeecCCcEEEEEEcc-CCCEEEEE
Q psy10953 118 RR---------ENMHTFKHADQVWCVCVAP-DGDKFVSV 146 (181)
Q Consensus 118 ~~---------~~~~~~~~~~~v~~~~~sp-~g~~l~~~ 146 (181)
.. ..+....+. ..+.++|+| +|+.+++-
T Consensus 178 G~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 21 112222222 356899999 56655543
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.91 E-value=0.0035 Score=52.87 Aligned_cols=155 Identities=6% Similarity=-0.040 Sum_probs=94.6
Q ss_pred eeeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCC----cEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCC
Q psy10953 11 PVDMWNVVFSPDDKYV-LSGSQSGKINLYGVETG----KLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANT 84 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~ 84 (181)
......++|++.+..| ++-...+.|+.+++... ....++...-.....+++++.++.|+. -...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3445788898855544 45555678888888653 223333322222347888877765554 45577888888864
Q ss_pred CC--------cccEEEEEEcCCCCEEEEEe-CC-CcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCcE
Q psy10953 85 GH--------SSWVLSTAFTRDGKFFISAS-AD-HTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKAV 152 (181)
Q Consensus 85 ~~--------~~~v~~~~~s~~~~~l~~~~-~d-~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v 152 (181)
.. ......++++|.+..|.... .. +.|...++........+. .-....+|++++.+++|+.+. ..+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 32 23467899999755444433 33 678888886544332222 224688999998776665554 45689
Q ss_pred EEEeCCCCeeEEE
Q psy10953 153 HMYSYKPEEEVEV 165 (181)
Q Consensus 153 ~i~~~~~~~~~~~ 165 (181)
..+++....+..+
T Consensus 583 ~~~d~dG~~~~~v 595 (791)
T 3m0c_C 583 SSIDVNGGNRKTI 595 (791)
T ss_dssp EEEETTSCSCEEE
T ss_pred EEEecCCCceEEE
Confidence 8888865544433
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.88 E-value=0.0039 Score=46.76 Aligned_cols=150 Identities=8% Similarity=-0.036 Sum_probs=92.4
Q ss_pred eeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEE-EEEecCCceEEEEEECCCCCEE-EEeeCCCcEEEEeCCCCC--
Q psy10953 12 VDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLE-QIFDTRGKFTLSIAYSTDGHWI-ASGALDGIINIFDANTGH-- 86 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~s~d~~~l-~~~~~d~~v~i~d~~~~~-- 86 (181)
.....++|++.++.| ++-...+.|..++..++... ..+...-.....+++.+.+..| ++-...+.|.++++....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 345688898865544 55556778999988766422 2222211223467888755444 444556788888876432
Q ss_pred ------cccEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCcEEEEe
Q psy10953 87 ------SSWVLSTAFTRDGKFFISAS--ADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKAVHMYS 156 (181)
Q Consensus 87 ------~~~v~~~~~s~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~ 156 (181)
......++++|.+..+.... ..+.|..+++.......... .-...+.++++|+++.|+.+. ..+.|..++
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 23467889998655444444 25778888876433222221 223578999999776665554 567899999
Q ss_pred CCCCe
Q psy10953 157 YKPEE 161 (181)
Q Consensus 157 ~~~~~ 161 (181)
+....
T Consensus 195 ~dG~~ 199 (318)
T 3sov_A 195 LDGTN 199 (318)
T ss_dssp TTSCS
T ss_pred CCCCc
Confidence 86543
No 282
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.87 E-value=0.0031 Score=48.02 Aligned_cols=142 Identities=16% Similarity=0.134 Sum_probs=83.2
Q ss_pred ceeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe------cCCceEEEEEECCC----CCEEEEe-
Q psy10953 3 QISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD------TRGKFTLSIAYSTD----GHWIASG- 71 (181)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~------~~~~~~~~~~~s~d----~~~l~~~- 71 (181)
++..++.+....+.++|.|||+++++--..|.|++++..+++...... ....-...++++|+ +...++-
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 345566667778999999999977776558999999876665432211 11233468999996 4333322
Q ss_pred -eCCCcEEEEeCCCC-----C---c------------ccEEEEEEcCCCCEEEEEeC-------------CCcEEEEecC
Q psy10953 72 -ALDGIINIFDANTG-----H---S------------SWVLSTAFTRDGKFFISASA-------------DHTVRVWNFA 117 (181)
Q Consensus 72 -~~d~~v~i~d~~~~-----~---~------------~~v~~~~~s~~~~~l~~~~~-------------d~~i~v~d~~ 117 (181)
..++.|.-|.+..+ . . .....+.|.|+|.++++.+. .+.|.-++..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 23445555544321 0 0 01234789999998887542 2455545543
Q ss_pred CC---------ceeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 118 RR---------ENMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 118 ~~---------~~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
.. ..+....+. ..+.++|+|+|+.+++
T Consensus 183 G~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 21 112222232 3557899998776554
No 283
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.86 E-value=0.0072 Score=50.71 Aligned_cols=146 Identities=13% Similarity=0.166 Sum_probs=99.4
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec--------CCceEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT--------RGKFTLSIAYSTDGHWIASGALDGIINIFDAN 83 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~ 83 (181)
..+.++...++|+ |..|+.++-|..|+..+++....... ....+.++...++|+.|..|..++-+..+|..
T Consensus 357 ~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 3478888888776 66677787899999888776544311 13456788888888845556666678888876
Q ss_pred CCC------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-------cCCcEEEEEEccCCCEEE
Q psy10953 84 TGH------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-------HADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 84 ~~~------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~v~~~~~sp~g~~l~ 144 (181)
++. ...|.++..+++|++.+... +-+..||..+++...... ....|.++...++|+..+
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE
Confidence 431 24688888888898666544 458889987654322111 125688999999998766
Q ss_pred EEcCCCcEEEEeCCCCee
Q psy10953 145 SVGEDKAVHMYSYKPEEE 162 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~~~~ 162 (181)
... +.+..|+..++..
T Consensus 514 gt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 514 GGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp EES--SCEEEEEEETTEE
T ss_pred EeC--CceEEEeCCCCeE
Confidence 554 5688888765543
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.85 E-value=0.0045 Score=47.14 Aligned_cols=152 Identities=16% Similarity=0.328 Sum_probs=96.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECC----CCCE--EE-EeeC---CCcEEEEeCC--CCC---
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYST----DGHW--IA-SGAL---DGIINIFDAN--TGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~----d~~~--l~-~~~~---d~~v~i~d~~--~~~--- 86 (181)
...+++.....+-+.+||+ +|+.++.+.. +. ...+..-| .|+. ++ +... ++++.+|++. ++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~-~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT-GK-LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC-SC-EEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC-CC-cccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4556777777889999999 7888877753 22 22333322 3333 33 3333 5789999652 211
Q ss_pred ----------c-ccEEEEEE--cCC-CC-EEEEEeCCCcEEEEecC-------CCceeeeeecCCcEEEEEEccCCCEEE
Q psy10953 87 ----------S-SWVLSTAF--TRD-GK-FFISASADHTVRVWNFA-------RRENMHTFKHADQVWCVCVAPDGDKFV 144 (181)
Q Consensus 87 ----------~-~~v~~~~~--s~~-~~-~l~~~~~d~~i~v~d~~-------~~~~~~~~~~~~~v~~~~~sp~g~~l~ 144 (181)
. ..+..+++ +|. ++ +++....++.+..|++. +.+.+.++.....+..++..+...+|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 0 23445666 674 54 67777788999999883 235567777778899999999999999
Q ss_pred EEcCCCcEEEEeCCC-----CeeEEEcCCCCcchhhh
Q psy10953 145 SVGEDKAVHMYSYKP-----EEEVEVNGGGGEEEEEE 176 (181)
Q Consensus 145 ~~~~d~~v~i~~~~~-----~~~~~~~~~~~~~~~~~ 176 (181)
.+-++..|-.|+..+ .+.+....+++-..+.|
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvE 232 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIE 232 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcc
Confidence 999986655555432 34555554443333343
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=0.0013 Score=52.46 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=90.7
Q ss_pred EEEEEEcCCCCEE-EEEeCCCcEEEEeCC-------CCcE-----------E-EEEec-CCceEEEEEECCCCCEEEEe-
Q psy10953 14 MWNVVFSPDDKYV-LSGSQSGKINLYGVE-------TGKL-----------E-QIFDT-RGKFTLSIAYSTDGHWIASG- 71 (181)
Q Consensus 14 ~~~~~~s~~g~~l-~~~~~d~~i~~~d~~-------~~~~-----------~-~~~~~-~~~~~~~~~~s~d~~~l~~~- 71 (181)
...++++|++..| ++-..++.|..+|.. ++.. . .++.. .......++|+|+|+.|+.+
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 4678899955554 555567789999987 5554 1 22322 22334689999999965554
Q ss_pred eCCCcEEEEeC--CCC-------------Cc------------ccEE-EEEEc-------CCCCEEEEEeCCCcEEEEec
Q psy10953 72 ALDGIINIFDA--NTG-------------HS------------SWVL-STAFT-------RDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 72 ~~d~~v~i~d~--~~~-------------~~------------~~v~-~~~~s-------~~~~~l~~~~~d~~i~v~d~ 116 (181)
.....|+.++. ..+ .. .... .+... ++|.++++=..++.|+.++.
T Consensus 329 ~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 45667777543 211 00 1234 44454 56777777777888999984
Q ss_pred CCCceeeeee-c------------------------CCcEEEEEEccC-CCEEEEEcCCCcEEEEeCCCC
Q psy10953 117 ARRENMHTFK-H------------------------ADQVWCVCVAPD-GDKFVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 117 ~~~~~~~~~~-~------------------------~~~v~~~~~sp~-g~~l~~~~~d~~v~i~~~~~~ 160 (181)
++. +.++. . -....+++++++ |+.+++=..+++|+.+++...
T Consensus 409 -~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 409 -EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp -TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred -CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 332 22221 0 124778999997 766666667789999988643
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.80 E-value=0.0069 Score=46.87 Aligned_cols=152 Identities=10% Similarity=0.031 Sum_probs=97.2
Q ss_pred eeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC--CCcEEEEeCCCCC--
Q psy10953 12 VDMWNVVFSPD-DKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL--DGIINIFDANTGH-- 86 (181)
Q Consensus 12 ~~~~~~~~s~~-g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~--d~~v~i~d~~~~~-- 86 (181)
.....+++.+. +++.++-...+.|.+.+++......++.........++++|.+..|+.... .+.|...++....
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 34578899874 455556566788999998866655555433344568999997666655442 4678888875322
Q ss_pred ------cccEEEEEEcCCCCEEEEE-eCCCcEEEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 87 ------SSWVLSTAFTRDGKFFISA-SADHTVRVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 87 ------~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
......++++|++..|..+ ...+.|..+|+.......... ......++++. .+..+++-...+.|..++
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEE
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEE
Confidence 2457889999876655444 456789999986543222222 12345677773 345566666678899998
Q ss_pred CCCCeeEE
Q psy10953 157 YKPEEEVE 164 (181)
Q Consensus 157 ~~~~~~~~ 164 (181)
..++..+.
T Consensus 318 ~~~G~~~~ 325 (400)
T 3p5b_L 318 RLTGSDVN 325 (400)
T ss_dssp SSSCCCCE
T ss_pred cCCCCceE
Confidence 66664443
No 287
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.77 E-value=0.0081 Score=46.92 Aligned_cols=135 Identities=15% Similarity=0.176 Sum_probs=91.8
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCC---c-eEEEEEECCCCCEEEEeeCCCcEEEEeCCCC--------
Q psy10953 18 VFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRG---K-FTLSIAYSTDGHWIASGALDGIINIFDANTG-------- 85 (181)
Q Consensus 18 ~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---~-~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~-------- 85 (181)
..+.+|..++.+- +..||+-++......+.+.... . .+..+..+|+|++||..+ +..|.+..+..+
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 3456777776664 5789988887444444444431 1 245789999999888765 446777766411
Q ss_pred ------------------CcccEEEEEEcCCC---CEEEEEeCCCcEEEEecCCCc-eeeeee----------cCCcEEE
Q psy10953 86 ------------------HSSWVLSTAFTRDG---KFFISASADHTVRVWNFARRE-NMHTFK----------HADQVWC 133 (181)
Q Consensus 86 ------------------~~~~v~~~~~s~~~---~~l~~~~~d~~i~v~d~~~~~-~~~~~~----------~~~~v~~ 133 (181)
....|..+-|+|-+ ..|++-..|+.|++||+.... ....+. ....+.+
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEE
Confidence 12358889999964 589999999999999997521 111221 1246889
Q ss_pred EEEccCCCEEEEEc--CCCcEEE
Q psy10953 134 VCVAPDGDKFVSVG--EDKAVHM 154 (181)
Q Consensus 134 ~~~sp~g~~l~~~~--~d~~v~i 154 (181)
+||++++-.|+..+ .+|.|+-
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCEEE
Confidence 99999888888855 6777764
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.76 E-value=0.013 Score=49.12 Aligned_cols=142 Identities=13% Similarity=0.187 Sum_probs=97.7
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe----cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC--
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD----TRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG-- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~-- 85 (181)
..++++...++|+.|+.|+.++-+..+|.++++...... .....+.++...++|...+.. .+ -+..||..++
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSF 483 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeE
Confidence 457888888888867778877789999998887655432 123456788888888855543 34 4777886542
Q ss_pred ------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee--------cCCcEEEEEEccCCCEEEE
Q psy10953 86 ------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK--------HADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 86 ------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--------~~~~v~~~~~sp~g~~l~~ 145 (181)
....|.++..+++|++.+... +-+..||..++.. .+. ....|.++..+++|+..++
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVG 559 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEE
Confidence 124688888999999776554 4588898876553 221 2346889999999886664
Q ss_pred EcCCCcEEEEeCCCCe
Q psy10953 146 VGEDKAVHMYSYKPEE 161 (181)
Q Consensus 146 ~~~d~~v~i~~~~~~~ 161 (181)
.. . .+..|+..++.
T Consensus 560 T~-~-Gl~~~d~~~~~ 573 (795)
T 4a2l_A 560 TR-E-GFYCFNEKDKQ 573 (795)
T ss_dssp ES-S-CEEEEETTTTE
T ss_pred eC-C-CceeECCCCCc
Confidence 44 3 68888876654
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.74 E-value=0.00055 Score=55.59 Aligned_cols=127 Identities=16% Similarity=0.192 Sum_probs=82.6
Q ss_pred CCCC---EEEEEeCCCcEEEEeCCCCcEEEEEecCC-------------ceE--------------------------EE
Q psy10953 21 PDDK---YVLSGSQSGKINLYGVETGKLEQIFDTRG-------------KFT--------------------------LS 58 (181)
Q Consensus 21 ~~g~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~~--------------------------~~ 58 (181)
++|+ .++.++.+|.+.++|.++++.+..+.... ..+ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4674 56778889999999999999875544221 111 13
Q ss_pred EEECCCCCEEEEee-------------------------------------CCCcEEEEeCCCCCcccEEEE-------E
Q psy10953 59 IAYSTDGHWIASGA-------------------------------------LDGIINIFDANTGHSSWVLST-------A 94 (181)
Q Consensus 59 ~~~s~d~~~l~~~~-------------------------------------~d~~v~i~d~~~~~~~~v~~~-------~ 94 (181)
++++|+..+++... .++.+..||+.+++..+-... .
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~ 470 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGT 470 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBC
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCcccee
Confidence 56778777666543 347888899887754332221 1
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEE--EEEEccCCCEEEEEc
Q psy10953 95 FTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVW--CVCVAPDGDKFVSVG 147 (181)
Q Consensus 95 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~--~~~~sp~g~~l~~~~ 147 (181)
+...+..++.++.|+.++.+|.++++.+.++.....+. -+.+..+|+.++...
T Consensus 471 ~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 471 LYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 22235666778899999999999999998886443332 133456777655433
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.73 E-value=0.0078 Score=45.45 Aligned_cols=151 Identities=11% Similarity=0.051 Sum_probs=95.4
Q ss_pred eEEEEEE---cCCCCEEEEEe-------------CCCcEEEEeCC---CCcEEEEEecC----C---------ceEEEEE
Q psy10953 13 DMWNVVF---SPDDKYVLSGS-------------QSGKINLYGVE---TGKLEQIFDTR----G---------KFTLSIA 60 (181)
Q Consensus 13 ~~~~~~~---s~~g~~l~~~~-------------~d~~i~~~d~~---~~~~~~~~~~~----~---------~~~~~~~ 60 (181)
.++.+.| .|+|+++++.. .+..+..||+. +++........ + .....+.
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 4689999 68877777543 25779999999 78776555421 1 1245899
Q ss_pred ECCCCCEEEEeeCC-CcEEEEeCCCCC-------------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCce--eee
Q psy10953 61 YSTDGHWIASGALD-GIINIFDANTGH-------------SSWVLSTAFTRDGKFFISASADHTVRVWNFARREN--MHT 124 (181)
Q Consensus 61 ~s~d~~~l~~~~~d-~~v~i~d~~~~~-------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~ 124 (181)
..++|+..++++.- +.|...+..... ....+.++++|+|+.|+.....+.+..+|+..... +..
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~ 223 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPV 223 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEEC
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecc
Confidence 99999988887777 666666554221 11134789999999888777799999999875432 211
Q ss_pred e--e---cCCcEEE-EEEccCCCEE-EEEcCCCcEEEEeCCCCeeE
Q psy10953 125 F--K---HADQVWC-VCVAPDGDKF-VSVGEDKAVHMYSYKPEEEV 163 (181)
Q Consensus 125 ~--~---~~~~v~~-~~~sp~g~~l-~~~~~d~~v~i~~~~~~~~~ 163 (181)
- . .-...-. +..-.+|+.+ ++.+..+.+.+.+.......
T Consensus 224 ~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa 269 (334)
T 2p9w_A 224 KINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSA 269 (334)
T ss_dssp EESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEE
T ss_pred cccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCccee
Confidence 1 0 1112233 3333467774 44444556666665544433
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.71 E-value=0.0011 Score=54.01 Aligned_cols=72 Identities=13% Similarity=0.391 Sum_probs=48.9
Q ss_pred CCcEEEEeCCCCCcccEEEE-------EEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEE--EEEccCCCEEE
Q psy10953 74 DGIINIFDANTGHSSWVLST-------AFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWC--VCVAPDGDKFV 144 (181)
Q Consensus 74 d~~v~i~d~~~~~~~~v~~~-------~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~--~~~sp~g~~l~ 144 (181)
++.+.-||+.+++..+-... .+...+.+++.++.|+.++.||.++++.+.++.....+.+ +.+..+|+.++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 57788889887754332211 1112356777899999999999999999988875544432 45567887554
Q ss_pred E
Q psy10953 145 S 145 (181)
Q Consensus 145 ~ 145 (181)
+
T Consensus 545 ~ 545 (582)
T 1flg_A 545 G 545 (582)
T ss_dssp E
T ss_pred E
Confidence 4
No 292
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.70 E-value=0.0021 Score=45.78 Aligned_cols=133 Identities=11% Similarity=0.006 Sum_probs=80.0
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec------C--CceEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT------R--GKFTLSIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~------~--~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+.+++|+|+|.+.++ .++.+.-.+..+.+....+.. . ..+ ..+.|.|+|.+.++ .||.++-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F-~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQF-QFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGC-SEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccc-eEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 3458999999997666 677766666544322111111 1 112 36889999987666 679998887632
Q ss_pred C-Cc--------------ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc------eeeee--ecCCcEEEEEEccCCC
Q psy10953 85 G-HS--------------SWVLSTAFTRDGKFFISASADHTVRVWNFARRE------NMHTF--KHADQVWCVCVAPDGD 141 (181)
Q Consensus 85 ~-~~--------------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~------~~~~~--~~~~~v~~~~~sp~g~ 141 (181)
. .. ..+..+.++|+|.+.+.. |+.++-....... ....+ ........+.|.|+|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 1 10 246889999999987766 7776544322111 00111 1122455577999998
Q ss_pred EEEEEcCCCcEEE
Q psy10953 142 KFVSVGEDKAVHM 154 (181)
Q Consensus 142 ~l~~~~~d~~v~i 154 (181)
.+++. ++.++.
T Consensus 195 l~~v~--~g~~Y~ 205 (236)
T 1tl2_A 195 LFGVQ--GGKFYE 205 (236)
T ss_dssp EEEEE--TTEEEE
T ss_pred EEEEe--CCeEEe
Confidence 77766 664443
No 293
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.69 E-value=0.0016 Score=49.58 Aligned_cols=140 Identities=11% Similarity=0.153 Sum_probs=77.2
Q ss_pred eeeeccCeeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe-------cCCceEEEEEECCC---CCEEEEe-e
Q psy10953 4 ISKINVGPVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD-------TRGKFTLSIAYSTD---GHWIASG-A 72 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~-------~~~~~~~~~~~s~d---~~~l~~~-~ 72 (181)
+..+.......+.++|.|+|++++.+...+.|++++.. ++....+. ........++++|+ +..|... .
T Consensus 10 ~~~va~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp EEEEEEEESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred EEEEECCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 34444455567999999999944455567999999853 33221111 11122458999996 4444433 2
Q ss_pred C-------CCcEEEEeCCCC-------------------CcccEEEEEEcCCCCEEEEEeCC-------------CcEEE
Q psy10953 73 L-------DGIINIFDANTG-------------------HSSWVLSTAFTRDGKFFISASAD-------------HTVRV 113 (181)
Q Consensus 73 ~-------d~~v~i~d~~~~-------------------~~~~v~~~~~s~~~~~l~~~~~d-------------~~i~v 113 (181)
. ...|..++.... .......++|.|+|.++++.+.. +.|.-
T Consensus 89 ~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~r 168 (353)
T 2g8s_A 89 EVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVR 168 (353)
T ss_dssp EECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEE
T ss_pred CCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEE
Confidence 2 124444443211 00113468999999877775432 45666
Q ss_pred EecCCC--------------ceeeeeecCCcEEEEEEcc-CCCEEEE
Q psy10953 114 WNFARR--------------ENMHTFKHADQVWCVCVAP-DGDKFVS 145 (181)
Q Consensus 114 ~d~~~~--------------~~~~~~~~~~~v~~~~~sp-~g~~l~~ 145 (181)
++.... ..+....+ ...+.++|+| +|+.+++
T Consensus 169 i~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 169 LTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred ECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 665432 11111122 2477899999 5554443
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.67 E-value=0.00035 Score=57.51 Aligned_cols=106 Identities=15% Similarity=0.226 Sum_probs=71.2
Q ss_pred EEEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCcEEEEEec---CCceEEEEEECCCCCEEEEeeC-CCcEE
Q psy10953 15 WNVVFSP-DDKYVLSGSQSG-----------KINLYGVETGKLEQIFDT---RGKFTLSIAYSTDGHWIASGAL-DGIIN 78 (181)
Q Consensus 15 ~~~~~s~-~g~~l~~~~~d~-----------~i~~~d~~~~~~~~~~~~---~~~~~~~~~~s~d~~~l~~~~~-d~~v~ 78 (181)
..+++.| +|++++.|+.+. .+.+||..+++....-.. +..+..+.++..+++.++.|+. +..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3567777 888888887543 588999988875433221 2222234677889999999874 55899
Q ss_pred EEeCCCCC---------cccEEEEEEcCCCCEEEEEe-CC-----CcEEEEecCCCc
Q psy10953 79 IFDANTGH---------SSWVLSTAFTRDGKFFISAS-AD-----HTVRVWNFARRE 120 (181)
Q Consensus 79 i~d~~~~~---------~~~v~~~~~s~~~~~l~~~~-~d-----~~i~v~d~~~~~ 120 (181)
+||..+.. ...-..++..++|+.++.|+ .+ ..+.+||..+.+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99975421 11112345667999999888 34 568999987654
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.63 E-value=0.019 Score=47.16 Aligned_cols=148 Identities=8% Similarity=0.022 Sum_probs=96.1
Q ss_pred eEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCC----
Q psy10953 13 DMWNVVFSPDDKYVL-SGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANTGH---- 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~---- 86 (181)
....++|++.++.|+ +-..++.|+.+++........+...-.....+++++.+..|+. -...+.|.+.++....
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 467899998766654 5556788999988766555544432223457888876655544 4456788888875432
Q ss_pred ----cccEEEEEEcCC-CCEEEEEe-CCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEc-CCCcEEEEeCCC
Q psy10953 87 ----SSWVLSTAFTRD-GKFFISAS-ADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVG-EDKAVHMYSYKP 159 (181)
Q Consensus 87 ----~~~v~~~~~s~~-~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~~~~ 159 (181)
......++++|. |.++++-. ..+.|...++...........-....+++++++++.|+.+. ..+.|..+++..
T Consensus 118 ~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 118 VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 234678999985 55444432 24678878776544333333445688999999877665554 567888888865
Q ss_pred C
Q psy10953 160 E 160 (181)
Q Consensus 160 ~ 160 (181)
.
T Consensus 198 ~ 198 (628)
T 4a0p_A 198 L 198 (628)
T ss_dssp C
T ss_pred C
Confidence 4
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.59 E-value=0.0005 Score=57.19 Aligned_cols=153 Identities=10% Similarity=0.066 Sum_probs=91.9
Q ss_pred EEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC--CCcEEEEeCCCCC----
Q psy10953 14 MWNVVFSPDD-KYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL--DGIINIFDANTGH---- 86 (181)
Q Consensus 14 ~~~~~~s~~g-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~--d~~v~i~d~~~~~---- 86 (181)
...|++.+.+ +++++-...+.|.++++.......++.........++++|++.+|+.... .+.|..+++....
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 4567887544 44455456788999998766554444332223347888987655554432 2677777654221
Q ss_pred ----cccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCceeeeee---cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 87 ----SSWVLSTAFTRDG-KFFISASADHTVRVWNFARRENMHTFK---HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 87 ----~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
......++|+|++ +++++-+..+.|..+++.......... ......++++..+ +.+++-...+.|..++..
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 2345679999875 455555567889999986533222221 1123445666543 445555567899999987
Q ss_pred CCeeEEEcC
Q psy10953 159 PEEEVEVNG 167 (181)
Q Consensus 159 ~~~~~~~~~ 167 (181)
++..+.++.
T Consensus 614 ~G~~~~~i~ 622 (699)
T 1n7d_A 614 TGSDVNLLA 622 (699)
T ss_dssp TEEEEECCC
T ss_pred CCCceEEee
Confidence 777666543
No 297
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.55 E-value=0.029 Score=47.38 Aligned_cols=152 Identities=10% Similarity=0.036 Sum_probs=95.2
Q ss_pred eEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC--CCcEEEEeCCCCC---
Q psy10953 13 DMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL--DGIINIFDANTGH--- 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~--d~~v~i~d~~~~~--- 86 (181)
....|++.+.++.| ++-...+.|.+.++.......++.........++++|.+..|+.... .+.|...++....
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 34678998877555 45556788999998866555554433334568999998666665543 3677777775322
Q ss_pred -----cccEEEEEEcCCCCEEEEE-eCCCcEEEEecCCCceeeeeec---CCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 87 -----SSWVLSTAFTRDGKFFISA-SADHTVRVWNFARRENMHTFKH---ADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~---~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
..+...+++++.+..|..+ ...+.|..+++........... -....++++.. ++.+++-...+.|...+.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 630 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeC
Confidence 2467889999766544444 4567899999865433322221 12355676643 344555556778888887
Q ss_pred CCCeeEEE
Q psy10953 158 KPEEEVEV 165 (181)
Q Consensus 158 ~~~~~~~~ 165 (181)
.++..+.+
T Consensus 631 ~tG~~~~~ 638 (791)
T 3m0c_C 631 LTGSDVNL 638 (791)
T ss_dssp TTCCCCEE
T ss_pred CCCcceEE
Confidence 66654443
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.52 E-value=0.00057 Score=56.84 Aligned_cols=153 Identities=4% Similarity=-0.062 Sum_probs=88.1
Q ss_pred EEEEEEcCCCCEEEEE-eCCCcEEEEeCCC----CcEEEEEecCCceEEEEEECCCCCEE-EEeeCCCcEEEEeCCCCC-
Q psy10953 14 MWNVVFSPDDKYVLSG-SQSGKINLYGVET----GKLEQIFDTRGKFTLSIAYSTDGHWI-ASGALDGIINIFDANTGH- 86 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~-~~d~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~s~d~~~l-~~~~~d~~v~i~d~~~~~- 86 (181)
...++|++.++.|+.+ ...+.|+.+++.+ ......+.........+++++.+..| ++-...+.|.++++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~ 487 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 487 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce
Confidence 4578899877666554 4457899898875 22222222111122357777554444 444456788888875432
Q ss_pred -------cccEEEEEEcCCCC-EEEEEeCC-CcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEE-EEEcCCCcEEEE
Q psy10953 87 -------SSWVLSTAFTRDGK-FFISASAD-HTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKF-VSVGEDKAVHMY 155 (181)
Q Consensus 87 -------~~~v~~~~~s~~~~-~l~~~~~d-~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l-~~~~~d~~v~i~ 155 (181)
......++++|.+. ++++-... +.|+.+++.......... .-...++++++|++++| ++-+..+.|..+
T Consensus 488 ~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 488 KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 567 (699)
T ss_dssp EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEE
Confidence 12346788898654 44433222 678888775432211111 12346789999976555 555556789999
Q ss_pred eCCCCeeEEEc
Q psy10953 156 SYKPEEEVEVN 166 (181)
Q Consensus 156 ~~~~~~~~~~~ 166 (181)
++....+..+.
T Consensus 568 d~dG~~~~~~~ 578 (699)
T 1n7d_A 568 DVNGGNRKTIL 578 (699)
T ss_dssp CSSSSCCEEEC
T ss_pred ccCCCceEEEE
Confidence 98654443333
No 299
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.51 E-value=0.011 Score=48.35 Aligned_cols=147 Identities=14% Similarity=0.179 Sum_probs=91.9
Q ss_pred EEEEcCCCCE----EEEEeCCCcEEEEeCCCCcEEEEEecCCc----eEE-EEEECCCCCEEEEee------CCCcEEEE
Q psy10953 16 NVVFSPDDKY----VLSGSQSGKINLYGVETGKLEQIFDTRGK----FTL-SIAYSTDGHWIASGA------LDGIINIF 80 (181)
Q Consensus 16 ~~~~s~~g~~----l~~~~~d~~i~~~d~~~~~~~~~~~~~~~----~~~-~~~~s~d~~~l~~~~------~d~~v~i~ 80 (181)
.++++|.+.. ++.++.|+.+..+|.++|+.+-....... .+. ...+. ++ .++.++ .++.++-+
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~ 187 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAY 187 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEE
Confidence 3455444444 78888899999999999998755543220 111 11111 34 445544 37899999
Q ss_pred eCCCCCcccEE----------------------------------------------EEEEcCCCCEEEEEeCC------
Q psy10953 81 DANTGHSSWVL----------------------------------------------STAFTRDGKFFISASAD------ 108 (181)
Q Consensus 81 d~~~~~~~~v~----------------------------------------------~~~~s~~~~~l~~~~~d------ 108 (181)
|.++++..+-. ..++++...++..++.+
T Consensus 188 D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 188 DVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp ETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCG
T ss_pred ECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccC
Confidence 99876532211 12445555555555543
Q ss_pred ----------CcEEEEecCCCceeeeeecCC----------cEEEEEEc-cCC---CEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 109 ----------HTVRVWNFARRENMHTFKHAD----------QVWCVCVA-PDG---DKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 109 ----------~~i~v~d~~~~~~~~~~~~~~----------~v~~~~~s-p~g---~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
..|.-+|.++++....++... ...-+... .+| ..++.++.++.++++|..+++.+-
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 379999999999887765211 11112222 567 467778899999999999988764
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.36 E-value=0.024 Score=46.51 Aligned_cols=154 Identities=7% Similarity=0.017 Sum_probs=91.5
Q ss_pred eeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC--CCcEEEEeCCCC---
Q psy10953 12 VDMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL--DGIINIFDANTG--- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~--d~~v~i~d~~~~--- 85 (181)
.....+++.+.++.| ++-...+.|.+.++.......++...-.....++++|.+..|+.... .+.|...+....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 446789999865555 45556789999998765444444222223347889887655555443 456666665432
Q ss_pred -----CcccEEEEEEcCCCCE-EEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10953 86 -----HSSWVLSTAFTRDGKF-FISASADHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 86 -----~~~~v~~~~~s~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~ 158 (181)
...+...++++++++. +++-...+.|..+|+.......... ......++++..+ ..+++-...+.|...+..
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECC
Confidence 2345788999997554 4444456789999886543222111 1122346677655 444544457789998887
Q ss_pred CCeeEEEc
Q psy10953 159 PEEEVEVN 166 (181)
Q Consensus 159 ~~~~~~~~ 166 (181)
++......
T Consensus 243 tg~~~~~i 250 (619)
T 3s94_A 243 TGEGLREI 250 (619)
T ss_dssp SCCCCEEC
T ss_pred CCcccEEE
Confidence 77654443
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.065 Score=44.84 Aligned_cols=146 Identities=15% Similarity=0.145 Sum_probs=93.3
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEE---ecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC---
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIF---DTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG--- 85 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~--- 85 (181)
..+.++...++|+ |..|+.++-|..++..+++..... ......+.++...++|.+.+ |..++-+..+|..++
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 3478888887776 556666667888987765443221 11234567788888887554 665556777876532
Q ss_pred -------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-c-----CCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 86 -------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-H-----ADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 86 -------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~-----~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
....|.++..+++|++.+... +-+..||..+++...... . ...|.+++..++|+..+ +..++.+
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl 517 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGV 517 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCE
T ss_pred EeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCE
Confidence 234688888888888665443 458889987654322211 1 35689999999887655 4444557
Q ss_pred EEEeCCCCee
Q psy10953 153 HMYSYKPEEE 162 (181)
Q Consensus 153 ~i~~~~~~~~ 162 (181)
..|+...+..
T Consensus 518 ~~~~~~~~~~ 527 (781)
T 3v9f_A 518 GIYTPDMQLV 527 (781)
T ss_dssp EEECTTCCEE
T ss_pred EEEeCCCCeE
Confidence 7787765543
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.21 E-value=0.066 Score=43.89 Aligned_cols=151 Identities=7% Similarity=-0.045 Sum_probs=90.6
Q ss_pred eeEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCcE-EEEEecCCceEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCCc-
Q psy10953 12 VDMWNVVFSPDDKYVLSG-SQSGKINLYGVETGKL-EQIFDTRGKFTLSIAYSTDGHWIAS-GALDGIINIFDANTGHS- 87 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~-~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~d~~~l~~-~~~d~~v~i~d~~~~~~- 87 (181)
.....++|++.++.|+.+ ...+.|..+++..... ...+...-.....+++++.+..|+. -...+.|.+.++.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 346789999876666544 4467888888875532 2333322134568999986665554 45578899998865332
Q ss_pred -------ccEEEEEEcCCCC-EEEEEeC-CCcEEEEecCCCceeeeee-cCCcEEEEEEccCCCEEEEEc-CCCcEEEEe
Q psy10953 88 -------SWVLSTAFTRDGK-FFISASA-DHTVRVWNFARRENMHTFK-HADQVWCVCVAPDGDKFVSVG-EDKAVHMYS 156 (181)
Q Consensus 88 -------~~v~~~~~s~~~~-~l~~~~~-d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v~i~~ 156 (181)
.....++++|.+. ++++-.. .+.|...++.......... .-...++++++++++.|+.+. ..+.|..++
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~ 199 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 199 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEES
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEec
Confidence 2346788998754 4444322 3567666665433222221 234578999999766665554 567888888
Q ss_pred CCCCee
Q psy10953 157 YKPEEE 162 (181)
Q Consensus 157 ~~~~~~ 162 (181)
+....+
T Consensus 200 ~dG~~~ 205 (619)
T 3s94_A 200 LDGTNR 205 (619)
T ss_dssp SSCCEE
T ss_pred CCCCcc
Confidence 865433
No 303
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.08 E-value=0.011 Score=48.64 Aligned_cols=104 Identities=13% Similarity=0.207 Sum_probs=68.0
Q ss_pred EEEECC-CCCEEEEeeCCC-----------cEEEEeCCCCC-----------cccEEEEEEcCCCCEEEEEeC-CCcEEE
Q psy10953 58 SIAYST-DGHWIASGALDG-----------IINIFDANTGH-----------SSWVLSTAFTRDGKFFISASA-DHTVRV 113 (181)
Q Consensus 58 ~~~~s~-d~~~l~~~~~d~-----------~v~i~d~~~~~-----------~~~v~~~~~s~~~~~l~~~~~-d~~i~v 113 (181)
..++.+ +++.++.|+.+. .+.+||+.+.. ......+++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455666 788888876543 57889986542 112224567789999999884 568999
Q ss_pred EecCCCce--eeeeecCCcEEEEEEccCCCEEEEEc-CC-----CcEEEEeCCCCe
Q psy10953 114 WNFARREN--MHTFKHADQVWCVCVAPDGDKFVSVG-ED-----KAVHMYSYKPEE 161 (181)
Q Consensus 114 ~d~~~~~~--~~~~~~~~~v~~~~~sp~g~~l~~~~-~d-----~~v~i~~~~~~~ 161 (181)
||..+.+= +..+...-.-.++++.++|+.++.|+ .+ +.+.+||..+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99876531 11122111123456678999999988 34 568999987654
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.00 E-value=0.065 Score=40.05 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=79.0
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEE-EeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeC--------
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINL-YGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDA-------- 82 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~-~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~-------- 82 (181)
..++.++++|++.+++.+. .+.+.. .|-........-.........+.++++++.++ ++.+|.+++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~ 240 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGE 240 (327)
T ss_dssp CCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECC
T ss_pred cceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEe
Confidence 3568899999988776664 444433 33211111111112233455788888887554 445666666531
Q ss_pred -CCC---CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 83 -NTG---HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 83 -~~~---~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
..+ ....+..+++.++++.++++. ++.+ ++....++.-.... .+..+++++|.+++ .+++++.++.|..
T Consensus 241 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~ 317 (327)
T 2xbg_A 241 LLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLR 317 (327)
T ss_dssp CBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEE
T ss_pred ccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEE
Confidence 112 122478888998888777655 5666 33333333222222 23467788887655 4666777887766
Q ss_pred Ee
Q psy10953 155 YS 156 (181)
Q Consensus 155 ~~ 156 (181)
++
T Consensus 318 ~~ 319 (327)
T 2xbg_A 318 YV 319 (327)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.94 E-value=0.12 Score=42.38 Aligned_cols=151 Identities=3% Similarity=-0.077 Sum_probs=94.0
Q ss_pred eEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeC--CCcEEEEeCCCCC---
Q psy10953 13 DMWNVVFSPDDKYV-LSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGAL--DGIINIFDANTGH--- 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~--d~~v~i~d~~~~~--- 86 (181)
....+++.+.++.| ++-...+.|.+.++.......++...-.....++++|....|+.... .+.|...++....
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT 160 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence 35678888765555 55555678999998755443343233333468999986555555442 4667777665332
Q ss_pred ----cccEEEEEEcCCCCEEEEE-eCCCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10953 87 ----SSWVLSTAFTRDGKFFISA-SADHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSYKPEE 161 (181)
Q Consensus 87 ----~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~ 161 (181)
......++++++++.|..+ ...+.|..+|+................++++.. ++.+++-...+.|...+..++.
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 2457889999976654444 456789999986543321122233466888865 4555555567889988876665
Q ss_pred eEE
Q psy10953 162 EVE 164 (181)
Q Consensus 162 ~~~ 164 (181)
...
T Consensus 240 ~~~ 242 (628)
T 4a0p_A 240 NRT 242 (628)
T ss_dssp SCE
T ss_pred ceE
Confidence 433
No 306
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.14 Score=42.84 Aligned_cols=144 Identities=13% Similarity=0.153 Sum_probs=95.3
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe---------cCCceEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy10953 12 VDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD---------TRGKFTLSIAYSTDGHWIASGALDGIINIFDA 82 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~---------~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~ 82 (181)
..++++...++|. |+.|..++-|..++..++.+..... .....+.++...++|.+. .|..++-+..||.
T Consensus 313 ~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~ 390 (781)
T 3v9f_A 313 ASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFEN 390 (781)
T ss_dssp SCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEET
T ss_pred CeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEEC
Confidence 3478888888776 6777777888889887666543321 123457788888888744 4554555777776
Q ss_pred CCC-----------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCEEEEEc
Q psy10953 83 NTG-----------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 83 ~~~-----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~ 147 (181)
.++ ....|.++..+++|++.+ ++.++-+..+|..+++.. .+. ....|.++...++|+..+ +.
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi-gt 467 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWI-GT 467 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEE-EE
T ss_pred CCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEE-EE
Confidence 431 224578888888888665 555566888988765432 222 235688998888886555 44
Q ss_pred CCCcEEEEeCCCCe
Q psy10953 148 EDKAVHMYSYKPEE 161 (181)
Q Consensus 148 ~d~~v~i~~~~~~~ 161 (181)
. +.+.+|+..++.
T Consensus 468 ~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 468 H-AGVFVIDLASKK 480 (781)
T ss_dssp T-TEEEEEESSSSS
T ss_pred C-CceEEEeCCCCe
Confidence 4 578888876654
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.80 E-value=0.07 Score=40.68 Aligned_cols=144 Identities=17% Similarity=0.241 Sum_probs=83.7
Q ss_pred eEEEEEEcC--CCC-EEEEEe-C--CCcEEEEeCCCC-cEEEEEec-CC---ceEEEEEECCCCCEEEEee---------
Q psy10953 13 DMWNVVFSP--DDK-YVLSGS-Q--SGKINLYGVETG-KLEQIFDT-RG---KFTLSIAYSTDGHWIASGA--------- 72 (181)
Q Consensus 13 ~~~~~~~s~--~g~-~l~~~~-~--d~~i~~~d~~~~-~~~~~~~~-~~---~~~~~~~~s~d~~~l~~~~--------- 72 (181)
....+++.+ +|. +|+.+. . +.++.+|++..+ +....+.. .+ .....+.+.++|...++..
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 456677655 454 444442 2 467888877543 33222221 11 1245788889998766643
Q ss_pred --------CCCcEEEEeCCCCC-----cccEEEEEEcCCCCEEEEE-eCCCcEEEEecCC-Cce--eeeeecCCcEEEEE
Q psy10953 73 --------LDGIINIFDANTGH-----SSWVLSTAFTRDGKFFISA-SADHTVRVWNFAR-REN--MHTFKHADQVWCVC 135 (181)
Q Consensus 73 --------~d~~v~i~d~~~~~-----~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~-~~~--~~~~~~~~~v~~~~ 135 (181)
..+.++.+|....+ -...+.++|+||++.+..+ +..+.|+.|++.. +.. ...+......-.++
T Consensus 193 ~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~ 272 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNIS 272 (355)
T ss_dssp HHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEE
T ss_pred cchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEE
Confidence 12456666653211 1245789999999865544 4578999999863 221 12333455677899
Q ss_pred Ecc-CCCEEEEEcCC-CcEEEEe
Q psy10953 136 VAP-DGDKFVSVGED-KAVHMYS 156 (181)
Q Consensus 136 ~sp-~g~~l~~~~~d-~~v~i~~ 156 (181)
+.+ +|++.+++..+ ..|..|+
T Consensus 273 vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 273 VDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp ECTTTCCEEEEEESCHHHHHSCC
T ss_pred EeCCCCcEEEEecCCceEEEEEC
Confidence 999 59887766533 2444443
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.80 E-value=0.033 Score=43.53 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=72.1
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE------------EEEEecC------CceEEEEEECCC---CCEEEEe
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL------------EQIFDTR------GKFTLSIAYSTD---GHWIASG 71 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~------------~~~~~~~------~~~~~~~~~s~d---~~~l~~~ 71 (181)
++..+..+|+|++||..+ +.+|.+..+..+.. ...+... ...+..+.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 467799999999998886 56899998874321 1122221 234778999995 4689999
Q ss_pred eCCCcEEEEeCCCCC------------------cccEEEEEEcCCCCEEEE--EeCCCcEEEE
Q psy10953 72 ALDGIINIFDANTGH------------------SSWVLSTAFTRDGKFFIS--ASADHTVRVW 114 (181)
Q Consensus 72 ~~d~~v~i~d~~~~~------------------~~~v~~~~~s~~~~~l~~--~~~d~~i~v~ 114 (181)
..|+.|++||+.... ...|.+++|.+++-.|-. .+.+|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999999987421 134678899998875555 4477888754
No 309
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.79 E-value=0.044 Score=40.76 Aligned_cols=138 Identities=9% Similarity=0.057 Sum_probs=80.0
Q ss_pred EEcCCCCEEEEEeCC--------------CcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEee----CCCcEEE
Q psy10953 18 VFSPDDKYVLSGSQS--------------GKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGA----LDGIINI 79 (181)
Q Consensus 18 ~~s~~g~~l~~~~~d--------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~----~d~~v~i 79 (181)
-|+++|.+|+.+... ..|+..++..++...+... . ...+++++++|+... .+..++.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~--~---~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD--P---CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS--C---EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC--C---ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 468899999876543 3677778776664443321 1 236677899888765 3345555
Q ss_pred EeCCCCCcccEE---EEEEcCCCCEEEEEeC-CCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcCC--CcEE
Q psy10953 80 FDANTGHSSWVL---STAFTRDGKFFISASA-DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGED--KAVH 153 (181)
Q Consensus 80 ~d~~~~~~~~v~---~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--~~v~ 153 (181)
.++.......+. ..+++|+++.|.-.+. ...|+..++........+. +... ..++|++++|+-...+ ..|.
T Consensus 134 ~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~ 210 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIV 210 (302)
T ss_dssp EETTSCCCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEE
T ss_pred EECCCCCeEEEeCCCceEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEE
Confidence 566533221111 1456788887775554 5788888887654332222 2222 3466888887655533 2455
Q ss_pred EEeCCCCeeE
Q psy10953 154 MYSYKPEEEV 163 (181)
Q Consensus 154 i~~~~~~~~~ 163 (181)
.-++....+.
T Consensus 211 ~~~ldG~~~~ 220 (302)
T 3s25_A 211 HVNINNPNPV 220 (302)
T ss_dssp EECSSSCCCE
T ss_pred EEECCCCCeE
Confidence 5555444433
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.67 E-value=0.097 Score=37.31 Aligned_cols=127 Identities=10% Similarity=0.031 Sum_probs=75.9
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcE------EEEEecCC-ceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC-------c
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKL------EQIFDTRG-KFTLSIAYSTDGHWIASGALDGIINIFDANTGH-------S 87 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~------~~~~~~~~-~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~-------~ 87 (181)
....|+...+| +++.=....++. ...+-..+ .....++|+|+|.+.+. .++.++-.+..+.. .
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 34456666666 666555554441 11221111 12347999999986555 77777766664421 1
Q ss_pred ccE--------EEEEEcCCCCEEEEEeCCCcEEEEecCCCc-eee-----eee--cCCcEEEEEEccCCCEEEEEcCCCc
Q psy10953 88 SWV--------LSTAFTRDGKFFISASADHTVRVWNFARRE-NMH-----TFK--HADQVWCVCVAPDGDKFVSVGEDKA 151 (181)
Q Consensus 88 ~~v--------~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~-~~~-----~~~--~~~~v~~~~~sp~g~~l~~~~~d~~ 151 (181)
..| .++.|+|+|.+.++ .|+.|+-++..+.. ... .+. --..+..+.+.|+|...++. |+.
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 223 57889999998887 56999888764321 110 111 11467899999999887766 666
Q ss_pred EEEE
Q psy10953 152 VHMY 155 (181)
Q Consensus 152 v~i~ 155 (181)
++-.
T Consensus 156 lyr~ 159 (236)
T 1tl2_A 156 FYKA 159 (236)
T ss_dssp EEEE
T ss_pred EEec
Confidence 5443
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.60 E-value=0.15 Score=38.75 Aligned_cols=127 Identities=14% Similarity=0.242 Sum_probs=79.6
Q ss_pred CCcEEEEeC--CCCcEEEEEe------cCCceEEEEEE--CCC-CC-EEEEeeCCCcEEEEeCCC---C-----------
Q psy10953 32 SGKINLYGV--ETGKLEQIFD------TRGKFTLSIAY--STD-GH-WIASGALDGIINIFDANT---G----------- 85 (181)
Q Consensus 32 d~~i~~~d~--~~~~~~~~~~------~~~~~~~~~~~--s~d-~~-~l~~~~~d~~v~i~d~~~---~----------- 85 (181)
+.+|.+|++ .++++...-. ..-...+.+++ +|. ++ +++....++.+..|++.. +
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 478999977 3444333211 11123445666 775 44 466677789999988732 1
Q ss_pred CcccEEEEEEcCCCCEEEEEeCCCcEEEEecC-----CCceeeeee---cCCcEEEEEE--ccCCC-EEEEEc-CCCcEE
Q psy10953 86 HSSWVLSTAFTRDGKFFISASADHTVRVWNFA-----RRENMHTFK---HADQVWCVCV--APDGD-KFVSVG-EDKAVH 153 (181)
Q Consensus 86 ~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~-----~~~~~~~~~---~~~~v~~~~~--sp~g~-~l~~~~-~d~~v~ 153 (181)
-.+.+..++.++....|..+..+.-|..|+.. +++.+..+. ....+.++++ .++++ ++++.+ .++.+.
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 12345677888887778888877667666744 233443332 2236888888 56666 676666 467999
Q ss_pred EEeCC
Q psy10953 154 MYSYK 158 (181)
Q Consensus 154 i~~~~ 158 (181)
+|+..
T Consensus 258 Vydr~ 262 (355)
T 3amr_A 258 IYDRQ 262 (355)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 99996
No 312
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.54 E-value=0.086 Score=42.71 Aligned_cols=102 Identities=18% Similarity=0.262 Sum_probs=69.6
Q ss_pred EEEECCCCCEEEE-eeCCCcEEEEeCCC----------CC----------cccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy10953 58 SIAYSTDGHWIAS-GALDGIINIFDANT----------GH----------SSWVLSTAFTRDGKFFISASADHTVRVWNF 116 (181)
Q Consensus 58 ~~~~s~d~~~l~~-~~~d~~v~i~d~~~----------~~----------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 116 (181)
.+..+|||++++. |.-+.++.++|..+ .. .......+|+++|.-..+.--|..|..|++
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 6889999999876 55688999999762 10 123577899999977677778999999998
Q ss_pred CCC----------ceeeeeecCCcEEEEEE------ccCCCEEEEEc---CCCcE----------EEEeCCC
Q psy10953 117 ARR----------ENMHTFKHADQVWCVCV------APDGDKFVSVG---EDKAV----------HMYSYKP 159 (181)
Q Consensus 117 ~~~----------~~~~~~~~~~~v~~~~~------sp~g~~l~~~~---~d~~v----------~i~~~~~ 159 (181)
... ..+..+.-.-.+-.+.. .|+|++|++.. .|+.+ +++|+..
T Consensus 407 ~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 407 EEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp HHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred cHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 542 23333432233444443 57899998865 45554 6677643
No 313
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.51 E-value=0.16 Score=37.77 Aligned_cols=140 Identities=9% Similarity=0.105 Sum_probs=80.2
Q ss_pred EcCCCCEEEEEe--CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCC--------------CcEEEEeC
Q psy10953 19 FSPDDKYVLSGS--QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALD--------------GIINIFDA 82 (181)
Q Consensus 19 ~s~~g~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d--------------~~v~i~d~ 82 (181)
|+++|.++.... +++.|...+........+-. .. +.-++++|.+|+..... ..++..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~---~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN---DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEE---EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccC---Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 356777776654 34566666665444333322 11 24557889998877543 35666666
Q ss_pred CCCCcccE---EEEEEcCCCCEEEEEe--C--CCcEEEEecCCCceeeeeecCCcEEEEEEccCCCEEEEEcC-CCcEEE
Q psy10953 83 NTGHSSWV---LSTAFTRDGKFFISAS--A--DHTVRVWNFARRENMHTFKHADQVWCVCVAPDGDKFVSVGE-DKAVHM 154 (181)
Q Consensus 83 ~~~~~~~v---~~~~~s~~~~~l~~~~--~--d~~i~v~d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~~v~i 154 (181)
.......+ ....|++++++|+-.. . ...|+..++..........+.. .+++|+++.|+-.+. ...|..
T Consensus 96 dg~~~~~l~~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~ 171 (302)
T 3s25_A 96 NGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYR 171 (302)
T ss_dssp TSCCCEEEECSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEE
T ss_pred CCCcceEeecCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEE
Confidence 65442221 1236788888877665 2 3456666665433222222221 456888988876665 567877
Q ss_pred EeCCCCeeEEEcC
Q psy10953 155 YSYKPEEEVEVNG 167 (181)
Q Consensus 155 ~~~~~~~~~~~~~ 167 (181)
-++..+.+..+..
T Consensus 172 ~~l~g~~~~~l~~ 184 (302)
T 3s25_A 172 YDTASQSEALFYD 184 (302)
T ss_dssp EETTTTEEEEEEC
T ss_pred EECCCCCEEEEeC
Confidence 7776665544443
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.47 E-value=0.11 Score=37.98 Aligned_cols=136 Identities=14% Similarity=0.194 Sum_probs=72.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCCc--eEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCC---
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRGK--FTLSIAYSTDGHWIASGALD-----GIINIFDANTGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~d~~~l~~~~~d-----~~v~i~d~~~~~--- 86 (181)
++++++.|+.+ ..+.+||..+++....-..... ....+.+ +++.++.|+.+ ..+..||+.+..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 67777777654 3588899888776543322111 1112222 66777777654 468888876431
Q ss_pred -----cccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCce--eeeeecCCcEEEEEEccCCCEEEEEcCC-----
Q psy10953 87 -----SSWVLSTAFTRDGKFFISASAD-----HTVRVWNFARREN--MHTFKHADQVWCVCVAPDGDKFVSVGED----- 149 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~~--~~~~~~~~~v~~~~~sp~g~~l~~~~~d----- 149 (181)
...........+++.++.|+.+ ..+.+||+.+.+= +...+....-.++ ..-+++.++.|+.+
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~ 268 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA-TVLRGRLYAIAGYDGNSLL 268 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCBCSSSBE
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE-EEECCEEEEEcCcCCCccc
Confidence 0000011112256777777754 4688999876542 2112211111122 22367777777754
Q ss_pred CcEEEEeCCCC
Q psy10953 150 KAVHMYSYKPE 160 (181)
Q Consensus 150 ~~v~i~~~~~~ 160 (181)
..+.+||..+.
T Consensus 269 ~~v~~yd~~~~ 279 (301)
T 2vpj_A 269 SSIECYDPIID 279 (301)
T ss_dssp EEEEEEETTTT
T ss_pred ccEEEEcCCCC
Confidence 35778887654
No 315
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.47 E-value=0.17 Score=37.71 Aligned_cols=136 Identities=12% Similarity=0.154 Sum_probs=76.0
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcE-EEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKL-EQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN-------- 83 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~-------- 83 (181)
.++.+.+.+++..++++ .++.|.. ..+.++. ..........+..+.+.+++..++.+...+..+-.|..
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE
T ss_pred CeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC
Confidence 45778877777766655 4554422 2233332 22222222345678899998877666544333333421
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-----cCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 84 TGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-----HADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 84 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-----~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
......+..++++++++.++. +.++.+++.+...++.-.... ....+..+++.++++.++++. ++.+
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 201 RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 123345778889999886654 456777766322122211111 123588899998887777655 5555
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.29 E-value=0.24 Score=37.45 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=38.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEecCCCce------eeee-ecCCcEEEEEEccCCCEEEEEcC
Q psy10953 90 VLSTAFTRDGKFFISASADHTVRVWNFARREN------MHTF-KHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~------~~~~-~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
...++| .+|+++++....+.|...++..... ...+ .....+..+++.|||..+++...
T Consensus 270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 456666 5677777766777888887754321 1112 22357899999999988777643
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.19 E-value=0.14 Score=37.34 Aligned_cols=135 Identities=16% Similarity=0.229 Sum_probs=72.4
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCcEEEEEecCCc--eEEEEEECCCCCEEEEeeCC-------CcEEEEeCCCCC-
Q psy10953 22 DDKYVLSGSQSG-----KINLYGVETGKLEQIFDTRGK--FTLSIAYSTDGHWIASGALD-------GIINIFDANTGH- 86 (181)
Q Consensus 22 ~g~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~d~~~l~~~~~d-------~~v~i~d~~~~~- 86 (181)
++++++.|+.++ .+..||..+++....-..... ....+.+ +++.++.|+.+ ..+..||+.+..
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 677777777653 477888887765543221111 1111222 56666666542 457888876431
Q ss_pred --------c-ccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC-
Q psy10953 87 --------S-SWVLSTAFTRDGKFFISASAD-----HTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED- 149 (181)
Q Consensus 87 --------~-~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d- 149 (181)
. ..-..+ ..+++.++.|+.+ ..+.+||+.+.+ .+......-.-.++ ...+++.++.|+.+
T Consensus 186 ~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~-~~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV-CAVNGLLYVVGGDDG 262 (302)
T ss_dssp EEECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCBCS
T ss_pred EECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE-EEECCEEEEECCcCC
Confidence 0 011112 2256777777654 368899987653 12111111111112 22367777777754
Q ss_pred ----CcEEEEeCCCCe
Q psy10953 150 ----KAVHMYSYKPEE 161 (181)
Q Consensus 150 ----~~v~i~~~~~~~ 161 (181)
..+.+||..+.+
T Consensus 263 ~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 263 SCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSBCCCEEEEETTTTE
T ss_pred CcccccEEEEcCCCCe
Confidence 348888887654
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.81 E-value=0.22 Score=36.38 Aligned_cols=136 Identities=14% Similarity=0.222 Sum_probs=72.2
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCcEEEEEecCCc--eEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCC---
Q psy10953 22 DDKYVLSGSQS----GKINLYGVETGKLEQIFDTRGK--FTLSIAYSTDGHWIASGALD------GIINIFDANTGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~d~~~l~~~~~d------~~v~i~d~~~~~--- 86 (181)
++++++.|+.+ ..+..||..+++....-..... ....+.+ +++.++.|+.+ ..+.+||+.+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 67777787755 5688899988876544322111 1112222 56777777755 468888876431
Q ss_pred -----cccEEEEEEcCCCCEEEEEeC---------CCcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC-
Q psy10953 87 -----SSWVLSTAFTRDGKFFISASA---------DHTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED- 149 (181)
Q Consensus 87 -----~~~v~~~~~s~~~~~l~~~~~---------d~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d- 149 (181)
.......+...+++.++.|+. -..+.+||+.+.+ .+...+..-.-.+++ .-+++.++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLV-FVKDKIFAVGGQNG 211 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCEET
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEE-EECCEEEEEeCCCC
Confidence 000001111236677776653 3458889887653 121121111111222 2266677776643
Q ss_pred ----CcEEEEeCCCC
Q psy10953 150 ----KAVHMYSYKPE 160 (181)
Q Consensus 150 ----~~v~i~~~~~~ 160 (181)
..+.+||..+.
T Consensus 212 ~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLN 226 (306)
T ss_dssp TEEBCCEEEEETTTT
T ss_pred CCCCceEEEeeCCCC
Confidence 45788887654
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.72 E-value=0.31 Score=35.61 Aligned_cols=135 Identities=14% Similarity=0.133 Sum_probs=72.8
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeC---------CCcEEEEeCCC
Q psy10953 22 DDKYVLSGSQS------GKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGAL---------DGIINIFDANT 84 (181)
Q Consensus 22 ~g~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~---------d~~v~i~d~~~ 84 (181)
++++++.|+.+ ..+.+||..+++....-.... .....+.+ +++.++.|+. -..+..||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 67777787765 458899998877554322111 11112222 5666666653 34588888864
Q ss_pred CC--------cccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCc--eeeeeecC-CcEEEEEEccCCCEEEEEcC
Q psy10953 85 GH--------SSWVLSTAFTRDGKFFISASAD-----HTVRVWNFARRE--NMHTFKHA-DQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 85 ~~--------~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~--~~~~~~~~-~~v~~~~~sp~g~~l~~~~~ 148 (181)
.. .......+..-+++.++.|+.+ ..+.+||+.+.+ .+...+.. .....+.+ +++.++.|+.
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 256 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGF 256 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECB
T ss_pred CeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCc
Confidence 31 0000011112256777776643 368889987653 22222211 11222222 6777788874
Q ss_pred C-----CcEEEEeCCCC
Q psy10953 149 D-----KAVHMYSYKPE 160 (181)
Q Consensus 149 d-----~~v~i~~~~~~ 160 (181)
+ +.+.+||..+.
T Consensus 257 ~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 257 QGVGRLGHILEYNTETD 273 (306)
T ss_dssp CSSSBCCEEEEEETTTT
T ss_pred CCCeeeeeEEEEcCCCC
Confidence 3 46888888765
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.67 E-value=0.22 Score=36.63 Aligned_cols=138 Identities=11% Similarity=0.138 Sum_probs=71.3
Q ss_pred CCCEEEEEeCC--------CcEEEEeCCCCcEEEEEecCCc-eEEEEEECCCCCEEEEeeC------CCcEEEEeCCCCC
Q psy10953 22 DDKYVLSGSQS--------GKINLYGVETGKLEQIFDTRGK-FTLSIAYSTDGHWIASGAL------DGIINIFDANTGH 86 (181)
Q Consensus 22 ~g~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~~~~------d~~v~i~d~~~~~ 86 (181)
+++.++.|+.+ ..+..||..+++....-..... ...++.. .+++.++.|+. -+.+..||+.+..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 66777777642 3588899888765443221111 1111222 35667777765 2468888876421
Q ss_pred --------cccEEEEEEcCCCCEEEEEeCCC-----cEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC--
Q psy10953 87 --------SSWVLSTAFTRDGKFFISASADH-----TVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED-- 149 (181)
Q Consensus 87 --------~~~v~~~~~s~~~~~l~~~~~d~-----~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-- 149 (181)
.......+..-+++.++.|+.++ .+.+||+.+.+ .+...+..-.-.+++ .-+++.++.|+.+
T Consensus 177 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~ 255 (315)
T 4asc_A 177 WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV-SLVGTLYAIGGFATL 255 (315)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEEEE
T ss_pred EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE-EECCEEEEECCcccc
Confidence 00001111122667777777544 47888887653 221122111111222 2366777777753
Q ss_pred ------------CcEEEEeCCCCe
Q psy10953 150 ------------KAVHMYSYKPEE 161 (181)
Q Consensus 150 ------------~~v~i~~~~~~~ 161 (181)
+.+.+||..+.+
T Consensus 256 ~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 256 ETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp ECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CcCCccccccccCcEEEecCCCCh
Confidence 236778876653
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.67 E-value=0.54 Score=36.97 Aligned_cols=93 Identities=15% Similarity=0.316 Sum_probs=55.5
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCC----------------cccEEEEEEcC----CCCEEEEEeC--------
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANTGH----------------SSWVLSTAFTR----DGKFFISASA-------- 107 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~----------------~~~v~~~~~s~----~~~~l~~~~~-------- 107 (181)
...++|.|+|+++++-...+.|.+++...+. ......++|+| ++.++++-+.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 4589999999977765444567777653221 12345899999 4555555542
Q ss_pred ----CCcEEEEecCCC-------ceee-eeec--CCcEEEEEEccCCCEEEEEcC
Q psy10953 108 ----DHTVRVWNFARR-------ENMH-TFKH--ADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 108 ----d~~i~v~d~~~~-------~~~~-~~~~--~~~v~~~~~sp~g~~l~~~~~ 148 (181)
...|.-|++... +.+. .+.. ......++|.|||+++++.+.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124555554321 1111 1221 123678999999998887664
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.63 E-value=0.27 Score=35.79 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=72.1
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCc---EEEEEecCC--ceEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCC
Q psy10953 21 PDDKYVLSGSQS-----GKINLYGVETGK---LEQIFDTRG--KFTLSIAYSTDGHWIASGALD-----GIINIFDANTG 85 (181)
Q Consensus 21 ~~g~~l~~~~~d-----~~i~~~d~~~~~---~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~d-----~~v~i~d~~~~ 85 (181)
.++++++.|+.+ ..+.+||..+++ ....-.... .....+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 367777777755 368899988776 443322111 11112222 56777777643 36788887643
Q ss_pred Cc--------ccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCce--eeeeecCCcEEEEEEccCCCEEEEEcCC-
Q psy10953 86 HS--------SWVLSTAFTRDGKFFISASAD-----HTVRVWNFARREN--MHTFKHADQVWCVCVAPDGDKFVSVGED- 149 (181)
Q Consensus 86 ~~--------~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~~--~~~~~~~~~v~~~~~sp~g~~l~~~~~d- 149 (181)
.= ......+...+++.++.|+.+ ..+.+||+.+.+= +...+..-.-.++ ..-+++.++.|+.+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGV-ALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCBCS
T ss_pred eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceE-EEECCEEEEEeCCCC
Confidence 10 000011112266777777654 4588888876532 1111111111112 22356677777653
Q ss_pred ----CcEEEEeCCCC
Q psy10953 150 ----KAVHMYSYKPE 160 (181)
Q Consensus 150 ----~~v~i~~~~~~ 160 (181)
+.+.+||..+.
T Consensus 218 ~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTD 232 (301)
T ss_dssp SSBCCCEEEEETTTT
T ss_pred CcccceEEEEeCCCC
Confidence 46888887654
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.32 E-value=0.41 Score=34.88 Aligned_cols=135 Identities=15% Similarity=0.223 Sum_probs=70.6
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCCc--eEEEEEECCCCCEEEEeeCCC-----cEEEEeCCCCC---
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRGK--FTLSIAYSTDGHWIASGALDG-----IINIFDANTGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~d~~~l~~~~~d~-----~v~i~d~~~~~--- 86 (181)
++++++.|+.+ ..+..||..+.+....-..... ....+.+ +++.++.|+.++ .+.+||+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 67777777754 3588899887775543222111 1112222 567777776553 57778876421
Q ss_pred ------cccEEEEEEcCCCCEEEEEeCC-------CcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC--
Q psy10953 87 ------SSWVLSTAFTRDGKFFISASAD-------HTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED-- 149 (181)
Q Consensus 87 ------~~~v~~~~~s~~~~~l~~~~~d-------~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-- 149 (181)
...-.+++ ..+++.++.|+.+ ..+.+||+.+.+ .+...+..-.-.+++ .-+++.++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~ 216 (302)
T 2xn4_A 139 VAPMNTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG-VLNNLLYAVGGHDGP 216 (302)
T ss_dssp ECCCSSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBSSS
T ss_pred cCCCCCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE-EECCEEEEECCCCCC
Confidence 00001111 2356777766542 358888887653 221222111111222 2266777777654
Q ss_pred ---CcEEEEeCCCC
Q psy10953 150 ---KAVHMYSYKPE 160 (181)
Q Consensus 150 ---~~v~i~~~~~~ 160 (181)
+.+.+||..+.
T Consensus 217 ~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 217 LVRKSVEVYDPTTN 230 (302)
T ss_dssp SBCCCEEEEETTTT
T ss_pred cccceEEEEeCCCC
Confidence 46888887654
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.28 E-value=0.35 Score=35.43 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=72.4
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCC---
Q psy10953 22 DDKYVLSGSQS-----GKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGALD-----GIINIFDANTGH--- 86 (181)
Q Consensus 22 ~g~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~d-----~~v~i~d~~~~~--- 86 (181)
++++++.|+.+ ..+..||..+++....-.... .....+.+ +++.++.|+.+ +.+..||+.+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 67777777643 358889988776544322111 11112222 56777777654 468888876421
Q ss_pred ------c-ccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCce--eeeeecCCcEEEEEEccCCCEEEEEcCC---
Q psy10953 87 ------S-SWVLSTAFTRDGKFFISASAD-----HTVRVWNFARREN--MHTFKHADQVWCVCVAPDGDKFVSVGED--- 149 (181)
Q Consensus 87 ------~-~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~~--~~~~~~~~~v~~~~~sp~g~~l~~~~~d--- 149 (181)
. ..-..+.+ +++.++.++.+ ..+.+||+.+.+= +...+..-.-.+++. -+++.++.|+.+
T Consensus 199 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~ 275 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHT 275 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSC
T ss_pred CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCc
Confidence 0 01112222 67777777654 4688999876531 111221111112222 266777777743
Q ss_pred --CcEEEEeCCCCe
Q psy10953 150 --KAVHMYSYKPEE 161 (181)
Q Consensus 150 --~~v~i~~~~~~~ 161 (181)
..+.+||..+.+
T Consensus 276 ~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 276 FLDSVECYDPDTDT 289 (308)
T ss_dssp BCCEEEEEETTTTE
T ss_pred ccceEEEEcCCCCE
Confidence 457788886653
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.14 E-value=0.75 Score=34.73 Aligned_cols=59 Identities=25% Similarity=0.285 Sum_probs=39.4
Q ss_pred cEEEEEEcC-------CCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCEEEEEc
Q psy10953 89 WVLSTAFTR-------DGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 89 ~v~~~~~s~-------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~ 147 (181)
.+..++|.+ +|+++++.-..+.|...++..++...... ....+..+++.|||..+++..
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 355667753 57777777677888888877554332211 234789999999998766543
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.12 E-value=0.67 Score=35.16 Aligned_cols=92 Identities=16% Similarity=0.256 Sum_probs=56.6
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCC--------------cccEEEEEEcCC----CCEEEEEe--CCCcEEEEe
Q psy10953 56 TLSIAYSTDGHWIASGALDGIINIFDANTGH--------------SSWVLSTAFTRD----GKFFISAS--ADHTVRVWN 115 (181)
Q Consensus 56 ~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~--------------~~~v~~~~~s~~----~~~l~~~~--~d~~i~v~d 115 (181)
...++|.|||.++++--..|.|++++...+. ......++++|+ +.++++-+ .+..|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 4689999999977766558889888764332 123568899995 55555432 334555555
Q ss_pred cCCC----------cee-eeeecC--CcEEEEEEccCCCEEEEEc
Q psy10953 116 FARR----------ENM-HTFKHA--DQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 116 ~~~~----------~~~-~~~~~~--~~v~~~~~sp~g~~l~~~~ 147 (181)
+... +.+ ..+... ..-..++|.|||.++++.+
T Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 114 YDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp BCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred eCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 4431 111 112211 1234699999998888765
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.01 E-value=0.61 Score=34.26 Aligned_cols=138 Identities=15% Similarity=0.246 Sum_probs=70.7
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCcEEEEEecCCce-EEEEEECCCCCEEEEeeC------CCcEEEEeCCCCC-
Q psy10953 22 DDKYVLSGSQS-------GKINLYGVETGKLEQIFDTRGKF-TLSIAYSTDGHWIASGAL------DGIINIFDANTGH- 86 (181)
Q Consensus 22 ~g~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~d~~~l~~~~~------d~~v~i~d~~~~~- 86 (181)
++++++.|+.+ ..+.+||..+.+....-...... -.++.. .+++.++.|+. -+.+.+||+.+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 66777777754 24778888877665432211111 011222 36676677654 2458889886431
Q ss_pred -------cccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcCC---
Q psy10953 87 -------SSWVLSTAFTRDGKFFISASAD-----HTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGED--- 149 (181)
Q Consensus 87 -------~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--- 149 (181)
.......+..-+++.++.|+.+ ..+.+||+.+.+ .+...+..-.-.++ ...+++.++.|+.+
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~ 266 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL-VSLAGSLYAIGGFAMIQ 266 (318)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE-EEETTEEEEECCBCCBC
T ss_pred EECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE-EEECCEEEEECCeeccC
Confidence 0000001112356777777643 346788887643 22222211111122 22356777777643
Q ss_pred -----------CcEEEEeCCCCe
Q psy10953 150 -----------KAVHMYSYKPEE 161 (181)
Q Consensus 150 -----------~~v~i~~~~~~~ 161 (181)
+.+.+||..+.+
T Consensus 267 ~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 267 LESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp ----CCBCCBCCCEEEEETTTTE
T ss_pred CCCceeccceeeeEEEEeCCCCE
Confidence 357788887653
No 328
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.86 E-value=0.5 Score=37.31 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=29.1
Q ss_pred eeeeccCeeeEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Q psy10953 4 ISKINVGPVDMWNVVFSPDDK-YVLSGSQSGKINLYGVE 41 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~g~-~l~~~~~d~~i~~~d~~ 41 (181)
+..++.+....+.|+|.|||. +++++...|.|++++..
T Consensus 6 v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 6 IQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred EEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 445555666779999999996 56667788999999754
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.78 E-value=0.27 Score=37.24 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=66.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCcEEEEEecC--CceEEEEEE--CC-CCCEEEEe-eCCCcEEEEeCCCCCcccEEE-----
Q psy10953 24 KYVLSGSQSGKINLYGVETGKLEQIFDTR--GKFTLSIAY--ST-DGHWIASG-ALDGIINIFDANTGHSSWVLS----- 92 (181)
Q Consensus 24 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~--s~-d~~~l~~~-~~d~~v~i~d~~~~~~~~v~~----- 92 (181)
..++.++.||.|.-+|.++|+..-.+... ...+ ...- .+ ++..++.. ..||.++.++..++...+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 46788899999999999999987766543 1222 1110 01 22333333 578999988887653221111
Q ss_pred ----EEEc-----------CCCCEEEEEeCCCcEEEEecCCCceeeeeec
Q psy10953 93 ----TAFT-----------RDGKFFISASADHTVRVWNFARRENMHTFKH 127 (181)
Q Consensus 93 ----~~~s-----------~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 127 (181)
+..+ ..+..+.+++.++.++-.|+++++.+.++..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1110 0455678899999999999999999888763
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.66 E-value=1.1 Score=34.09 Aligned_cols=146 Identities=11% Similarity=0.219 Sum_probs=89.4
Q ss_pred eeeEEEEEEcCCCCEEEEEe---C----CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCC-----EEEEeeC---CC
Q psy10953 11 PVDMWNVVFSPDDKYVLSGS---Q----SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGH-----WIASGAL---DG 75 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~---~----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~-----~l~~~~~---d~ 75 (181)
..++.+-..+++.++++..+ . .|.+.+|..+. +..+.++.|.... ..+-.+|. .|+.+.. .+
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F--~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASF--AQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEE--EEECCTTCSSCEEEEEEEEEETTEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeee--EEEecCCCCCCceEEEEEEecCCCc
Confidence 35566777788999886433 1 36788998764 4445555443321 23333332 3444433 25
Q ss_pred cEEEEeCCCC--------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEE
Q psy10953 76 IINIFDANTG--------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCV 134 (181)
Q Consensus 76 ~v~i~d~~~~--------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~ 134 (181)
++++.++... ......+++.|+....+...+.-|.+++||+.++.++..-+ ..+.|-..
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 307 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe
Confidence 8888887432 12235667777777788888999999999999998876655 34445444
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 135 CVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+-+....-+++....|.|.-..++.
T Consensus 308 a~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 308 APHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEGGGTEEEEEETTCEEEEEEECT
T ss_pred cccCCCCcEEEEcCCCEEEEEEECc
Confidence 5444444555555666666555443
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.48 E-value=0.56 Score=34.32 Aligned_cols=134 Identities=15% Similarity=0.173 Sum_probs=70.7
Q ss_pred CCCEEEEEeC----C-----CcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCC
Q psy10953 22 DDKYVLSGSQ----S-----GKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGALD-----GIINIFDANTG 85 (181)
Q Consensus 22 ~g~~l~~~~~----d-----~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~d-----~~v~i~d~~~~ 85 (181)
++++++.|+. + ..+.+||..+.+....-.... .....+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6777777765 2 368889988776544322111 11112222 56777776643 46788887642
Q ss_pred C----------cccEEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCce--eeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 86 H----------SSWVLSTAFTRDGKFFISASAD-----HTVRVWNFARREN--MHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 86 ~----------~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~~--~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
. ...-..+.+ +++.++.|+.+ ..+.+||+.+.+= +...+..-.-.+++. -+++.++.|+.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 224 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGY 224 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCB
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-ECCEEEEEeCC
Confidence 1 001111222 66777777654 4588888876531 111111111112222 26667777765
Q ss_pred C-----CcEEEEeCCCC
Q psy10953 149 D-----KAVHMYSYKPE 160 (181)
Q Consensus 149 d-----~~v~i~~~~~~ 160 (181)
+ +.+.+||+.+.
T Consensus 225 ~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETE 241 (308)
T ss_dssp CSSSBCCCEEEEETTTT
T ss_pred CCCCccceEEEEeCCCC
Confidence 4 56888887554
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.00 E-value=0.96 Score=33.73 Aligned_cols=133 Identities=8% Similarity=-0.010 Sum_probs=64.8
Q ss_pred CcEEEEeCCCCcEEEEEecCC--ceEEEEEECCCCCEEEEeeC------CCcEEEEeC--CCC-------C---cccEEE
Q psy10953 33 GKINLYGVETGKLEQIFDTRG--KFTLSIAYSTDGHWIASGAL------DGIINIFDA--NTG-------H---SSWVLS 92 (181)
Q Consensus 33 ~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~d~~~l~~~~~------d~~v~i~d~--~~~-------~---~~~v~~ 92 (181)
..+.+||..+.+....-.... ....++.. .+++.++.|+. ...+..||+ .+. . ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 478899998877654432211 11012222 25666666653 345677776 221 0 001111
Q ss_pred EEEcCCCCEEEEEeCC----------------------CcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCEEEEEcC
Q psy10953 93 TAFTRDGKFFISASAD----------------------HTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDKFVSVGE 148 (181)
Q Consensus 93 ~~~s~~~~~l~~~~~d----------------------~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 148 (181)
.+...+++.++.|+.+ ..+.+||+.+.+ .+...+.. .....++..+++.++.|+.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG-RAYGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC-CBSSEEEEETTEEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC-cccceeEEeCCEEEEEeee
Confidence 1223456777777632 257788887543 22222211 1112233457788888885
Q ss_pred CC------cEEEEeCCCCeeEEEcC
Q psy10953 149 DK------AVHMYSYKPEEEVEVNG 167 (181)
Q Consensus 149 d~------~v~i~~~~~~~~~~~~~ 167 (181)
+. .+.++++++++.++...
T Consensus 326 ~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred CCCCCEeeeEEEEEEcCcEeEeeec
Confidence 42 35666888777665443
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.97 E-value=1.5 Score=36.36 Aligned_cols=147 Identities=10% Similarity=0.103 Sum_probs=80.4
Q ss_pred EEEEEcCCCCEEEEEeCCC------cEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCCC--cEEEEeCCCC
Q psy10953 15 WNVVFSPDDKYVLSGSQSG------KINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALDG--IINIFDANTG 85 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~------~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d~--~v~i~d~~~~ 85 (181)
..+.++.+++.++.|+.++ .+.+||..+.+....-... .....+++.-.+++.++.|+.++ .+.+||+.+.
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 3344433777778877543 5788998887654432111 11111233334788888887654 6888988642
Q ss_pred C-------------cccEEEEEEcCC-CCEEEEEeCC-------CcEEEEecCCCc--------eeeeeecCCcE-EEEE
Q psy10953 86 H-------------SSWVLSTAFTRD-GKFFISASAD-------HTVRVWNFARRE--------NMHTFKHADQV-WCVC 135 (181)
Q Consensus 86 ~-------------~~~v~~~~~s~~-~~~l~~~~~d-------~~i~v~d~~~~~--------~~~~~~~~~~v-~~~~ 135 (181)
. ...-.++.+..+ ++.++.|+.+ ..+..||+.+.. .+...+..... .+++
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~ 603 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK 603 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE
Confidence 1 001122444555 6777777652 358899987765 11111111111 1233
Q ss_pred EccCCCEEEEEcC--------CCcEEEEeCCCCe
Q psy10953 136 VAPDGDKFVSVGE--------DKAVHMYSYKPEE 161 (181)
Q Consensus 136 ~sp~g~~l~~~~~--------d~~v~i~~~~~~~ 161 (181)
...+++.++.|+. .+.+.+||..+..
T Consensus 604 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 3334777777774 2468888887653
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.86 E-value=1.4 Score=32.30 Aligned_cols=139 Identities=9% Similarity=0.090 Sum_probs=71.7
Q ss_pred EcCCCCEEEEEeC-----C------CcEEEEeCCCCcEEEEEecCCce--EEEEEECCCCCEEEEeeCC--------CcE
Q psy10953 19 FSPDDKYVLSGSQ-----S------GKINLYGVETGKLEQIFDTRGKF--TLSIAYSTDGHWIASGALD--------GII 77 (181)
Q Consensus 19 ~s~~g~~l~~~~~-----d------~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~s~d~~~l~~~~~d--------~~v 77 (181)
...+++.++.|+. . ..+..||..+++....-...... ...+.+ +++.++.|+.+ +.+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceE
Confidence 3457788888873 1 12778888877654332211110 111222 56666666632 468
Q ss_pred EEEeCCCCC--------cccEEEEEEcCCCCEEEEEeC-C-----CcEEEEecCCCc--eeeeeecCCcEEEEEEccCCC
Q psy10953 78 NIFDANTGH--------SSWVLSTAFTRDGKFFISASA-D-----HTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGD 141 (181)
Q Consensus 78 ~i~d~~~~~--------~~~v~~~~~s~~~~~l~~~~~-d-----~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~ 141 (181)
.+||+.+.. ...-...+...+++.++.|+. + ..+.+||+.+.+ .+...+.+-.-.+++ .-+++
T Consensus 120 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~ 198 (315)
T 4asc_A 120 MCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGR 198 (315)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTE
T ss_pred EEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCE
Confidence 888886431 001111122246677777775 2 468889987653 221222111111122 22677
Q ss_pred EEEEEcCCC-----cEEEEeCCCC
Q psy10953 142 KFVSVGEDK-----AVHMYSYKPE 160 (181)
Q Consensus 142 ~l~~~~~d~-----~v~i~~~~~~ 160 (181)
.++.|+.++ .+.+||..+.
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTT
T ss_pred EEEEeccCCCCccceEEEEECCCC
Confidence 777777543 4777887654
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.60 E-value=2.2 Score=33.74 Aligned_cols=146 Identities=10% Similarity=0.196 Sum_probs=91.0
Q ss_pred eeeEEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCC-----CEEEEeeCC---C
Q psy10953 11 PVDMWNVVFSPDDKYVLSGS-------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDG-----HWIASGALD---G 75 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~-----~~l~~~~~d---~ 75 (181)
..++.+-..++++++++..+ -.|.+.+|..+.+ ..+.+..|.... ..+-.+| +.++.+... +
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F--~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF--AQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEE--EEEECTTCSSEEEEEEEEECSTTCC
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeee--EEEecCCCCCCceEEEEEEecCCCc
Confidence 35566777789999987432 2367889987644 345555443322 2232233 234444432 6
Q ss_pred cEEEEeCCCC--------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEE
Q psy10953 76 IINIFDANTG--------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCV 134 (181)
Q Consensus 76 ~v~i~d~~~~--------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~ 134 (181)
++++.++... ......++..++....+...+.-|.+++||+.++.++..-+ ..+.|-..
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEe
Confidence 8888887432 12345677888888888888999999999999998776655 34445444
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCC
Q psy10953 135 CVAPDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 135 ~~sp~g~~l~~~~~d~~v~i~~~~~ 159 (181)
+-+....-+++....|.|.-..++.
T Consensus 307 ~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 307 APHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEETTTTEEEEEETTCEEEEEEECT
T ss_pred cccCCCCcEEEEccCceEEEEEEcc
Confidence 5455545555566677666555543
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.29 E-value=1.6 Score=32.03 Aligned_cols=138 Identities=9% Similarity=0.140 Sum_probs=69.5
Q ss_pred EcCCCCEEEEEeC----CC-------cEEEEeCCCCcEEEEEecCC-c-eEEEEEECCCCCEEEEeeCC-------CcEE
Q psy10953 19 FSPDDKYVLSGSQ----SG-------KINLYGVETGKLEQIFDTRG-K-FTLSIAYSTDGHWIASGALD-------GIIN 78 (181)
Q Consensus 19 ~s~~g~~l~~~~~----d~-------~i~~~d~~~~~~~~~~~~~~-~-~~~~~~~s~d~~~l~~~~~d-------~~v~ 78 (181)
...++..++.|+. ++ .+..||..+++....-.... . ......+ +++.++.|+.+ ..+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 3457788888873 11 17778888776544321111 1 1112222 56667777654 3577
Q ss_pred EEeCCCCC-------c-ccEEEEEEcCCCCEEEEEeC------CCcEEEEecCCCc--eeeeeecCCcEEEEEEccCCCE
Q psy10953 79 IFDANTGH-------S-SWVLSTAFTRDGKFFISASA------DHTVRVWNFARRE--NMHTFKHADQVWCVCVAPDGDK 142 (181)
Q Consensus 79 i~d~~~~~-------~-~~v~~~~~s~~~~~l~~~~~------d~~i~v~d~~~~~--~~~~~~~~~~v~~~~~sp~g~~ 142 (181)
+||+.+.. . ......+...+++.++.|+. -..+.+||+.+.+ .+...+..-.-.+++ .-+++.
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i 209 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVA-IHKGKI 209 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEE-EECCEE
Confidence 78876421 0 00011112246777777764 2358899987653 221122111111222 236677
Q ss_pred EEEEcCC-----CcEEEEeCCC
Q psy10953 143 FVSVGED-----KAVHMYSYKP 159 (181)
Q Consensus 143 l~~~~~d-----~~v~i~~~~~ 159 (181)
++.|+.+ +.+.+||..+
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTT
T ss_pred EEEcCcCCCCccceEEEEECCC
Confidence 7777643 3466777654
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.12 E-value=3 Score=31.50 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=59.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCce-------EEEEEEC-----CCCCEEEEeeCCCcEEEEeCCCCCccc
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKF-------TLSIAYS-----TDGHWIASGALDGIINIFDANTGHSSW 89 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~s-----~d~~~l~~~~~d~~v~i~d~~~~~~~~ 89 (181)
.+..+++|+.++++...|.++|+.+..+...... -.|.... ..+..++.+..+..+.+.+ +++. .+
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W 187 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SY 187 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-CC
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eE
Confidence 5567889999999999999999998877643211 0011111 1235566666666666655 3333 22
Q ss_pred EEE-EEE---------------cCCCCEEEEEeCCCcEEEEecCCCceee
Q psy10953 90 VLS-TAF---------------TRDGKFFISASADHTVRVWNFARRENMH 123 (181)
Q Consensus 90 v~~-~~~---------------s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 123 (181)
... -.+ +.++.+ +.++.|+.|+-+|..++..+.
T Consensus 188 ~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 188 NVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 211 112 123555 446788899988888777665
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.03 E-value=0.62 Score=37.87 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=50.8
Q ss_pred EEEEEcCCCCEEEEEeC-CCcEEEEecCCC------ce-------eeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10953 91 LSTAFTRDGKFFISASA-DHTVRVWNFARR------EN-------MHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 91 ~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~------~~-------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
..+..+|||++++.++. +.++.++|++.. +. ..+....-.....+|.++|..+.+.-.|..|..|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 34688999998887775 778999998631 11 22223444678899999996666667899999999
Q ss_pred CCC
Q psy10953 157 YKP 159 (181)
Q Consensus 157 ~~~ 159 (181)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 853
No 339
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.88 E-value=4.1 Score=30.69 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=40.2
Q ss_pred cEEEEEEc-------CCCCEEEEEeCCCcEEEEecCCC-cee--eeee--cCCcEEEEEEccCCCEEEEEc
Q psy10953 89 WVLSTAFT-------RDGKFFISASADHTVRVWNFARR-ENM--HTFK--HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 89 ~v~~~~~s-------~~~~~l~~~~~d~~i~v~d~~~~-~~~--~~~~--~~~~v~~~~~sp~g~~l~~~~ 147 (181)
.+..++|. .+|+++++....+.|..+++... ... ..+. ....+..+++.|||..+++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 35677773 56777777777788998888753 221 1222 135789999999998777664
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.79 E-value=6.3 Score=32.67 Aligned_cols=141 Identities=14% Similarity=0.199 Sum_probs=77.8
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCcEEEEE-e------cCCc-eEEEEEECCCCCEEEEeeCC------CcEEEEeC
Q psy10953 21 PDDKYVLSGSQS----GKINLYGVETGKLEQIF-D------TRGK-FTLSIAYSTDGHWIASGALD------GIINIFDA 82 (181)
Q Consensus 21 ~~g~~l~~~~~d----~~i~~~d~~~~~~~~~~-~------~~~~-~~~~~~~s~d~~~l~~~~~d------~~v~i~d~ 82 (181)
.++..++.|+.+ ..+.+||..+++....- . .... ....+.+..+++.++.|+.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567777777753 46888998888765543 2 1111 11123333267777777653 35778887
Q ss_pred CCCC---------cccEEEEEEcCCCCEEEEEeCCC--cEEEEecCCCc--eeee---eec-CCcEEEEEEccC-CCEEE
Q psy10953 83 NTGH---------SSWVLSTAFTRDGKFFISASADH--TVRVWNFARRE--NMHT---FKH-ADQVWCVCVAPD-GDKFV 144 (181)
Q Consensus 83 ~~~~---------~~~v~~~~~s~~~~~l~~~~~d~--~i~v~d~~~~~--~~~~---~~~-~~~v~~~~~sp~-g~~l~ 144 (181)
.+.. ...-.+++.-.+++.++.|+.++ .+.+||+.+.. .+.. .+. ......+++..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 6421 00111222324788888887654 68999987653 1111 111 111223444555 66667
Q ss_pred EEcC--C-----CcEEEEeCCCCe
Q psy10953 145 SVGE--D-----KAVHMYSYKPEE 161 (181)
Q Consensus 145 ~~~~--d-----~~v~i~~~~~~~ 161 (181)
.|+. + +.+.+|++.+..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7764 2 357888876654
No 341
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.27 E-value=3.1 Score=33.98 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=37.0
Q ss_pred EEEEEcCCCCEEEEEeCC----------C--cEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEe
Q psy10953 15 WNVVFSPDDKYVLSGSQS----------G--KINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASG 71 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d----------~--~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~ 71 (181)
=+|+|+|.|++++.-..+ + .+.+.+..++++.+.+... +..+..++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 478999999966554322 1 2445556677776665543 4456788888888877644
No 342
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=88.96 E-value=3.6 Score=33.46 Aligned_cols=60 Identities=15% Similarity=0.125 Sum_probs=41.7
Q ss_pred ccEEEEEEcCCCCEEEEEeCC------------CcEEEEecCCCceeeeee--cCCcEEEEEEccCCCEEEEEc
Q psy10953 88 SWVLSTAFTRDGKFFISASAD------------HTVRVWNFARRENMHTFK--HADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 88 ~~v~~~~~s~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~ 147 (181)
.....+.|+++|.+.++-... ..++.++..+++...... ...+++.++||||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 346789999999987743321 256666766665444333 335799999999999987765
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.78 E-value=3.1 Score=36.59 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=26.3
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee
Q psy10953 90 VLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF 125 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 125 (181)
+.+++..++..++++-+.|+++|+||+.+++++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344455677788888889999999988877655543
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.59 E-value=6 Score=34.20 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=29.5
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeee
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTF 125 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 125 (181)
.+.+++..++..++++.+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4666777778888999999999999998887766554
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.04 E-value=8.4 Score=30.33 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=56.0
Q ss_pred EEEEECCCCC-EEEEeeCCCcEEEEeCCCCC--------------------cccEEEEEEcCC----CCEEEEEeCC---
Q psy10953 57 LSIAYSTDGH-WIASGALDGIINIFDANTGH--------------------SSWVLSTAFTRD----GKFFISASAD--- 108 (181)
Q Consensus 57 ~~~~~s~d~~-~l~~~~~d~~v~i~d~~~~~--------------------~~~v~~~~~s~~----~~~l~~~~~d--- 108 (181)
..++|.|||. .++.+...|.|++++..... ......++|+|+ +.++++-+..
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~ 96 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQER 96 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCS
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCC
Confidence 5799999985 45556678899998743210 123567899996 5655554321
Q ss_pred ---------CcEEEEecCC----------Cceeeeeec---CCcEEEEEEccCCCEEEEEcCCC
Q psy10953 109 ---------HTVRVWNFAR----------RENMHTFKH---ADQVWCVCVAPDGDKFVSVGEDK 150 (181)
Q Consensus 109 ---------~~i~v~d~~~----------~~~~~~~~~---~~~v~~~~~sp~g~~l~~~~~d~ 150 (181)
..|.-|.+.. .+.+..+.. ...-..++|.|||.++++.+..+
T Consensus 97 ~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 97 WAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred cccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1344454432 122222221 12356799999999888877643
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=86.94 E-value=3.9 Score=33.38 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=39.3
Q ss_pred EEEEEEcCCCCEEEEEeCC------------CcEEEEecCCCceeeee--ecCCcEEEEEEccCCCEEEEEc
Q psy10953 90 VLSTAFTRDGKFFISASAD------------HTVRVWNFARRENMHTF--KHADQVWCVCVAPDGDKFVSVG 147 (181)
Q Consensus 90 v~~~~~s~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~ 147 (181)
.-.++|+|.|+++++-..+ ..+.+.+..+++..... +...++..++|+||++.|++.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4568999999977765432 12445555555543322 3556899999999999988764
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.10 E-value=8.5 Score=28.43 Aligned_cols=85 Identities=12% Similarity=0.191 Sum_probs=44.4
Q ss_pred CCCEEEEEeCC-CcEEEEeCCC--CcEEEEEecC--Cc-eEEEEEECCCCCEEEEeeC-C---------CcEEEEeCCCC
Q psy10953 22 DDKYVLSGSQS-GKINLYGVET--GKLEQIFDTR--GK-FTLSIAYSTDGHWIASGAL-D---------GIINIFDANTG 85 (181)
Q Consensus 22 ~g~~l~~~~~d-~~i~~~d~~~--~~~~~~~~~~--~~-~~~~~~~s~d~~~l~~~~~-d---------~~v~i~d~~~~ 85 (181)
++++++.|+.+ ..+..||..+ .+....-... .. ....+.+ +++.++.|+. + +.+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 77777777654 4688888864 4433322111 11 1112222 5677777765 2 46888888642
Q ss_pred C---------cccEEEEEEcCCCCEEEEEeCC
Q psy10953 86 H---------SSWVLSTAFTRDGKFFISASAD 108 (181)
Q Consensus 86 ~---------~~~v~~~~~s~~~~~l~~~~~d 108 (181)
. .......+...+++.++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 1 1111111222567777888754
No 348
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=84.85 E-value=8.2 Score=31.44 Aligned_cols=58 Identities=16% Similarity=0.180 Sum_probs=32.3
Q ss_pred EEEEEEcCCCCEEEEEeCC----------C--cEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEe
Q psy10953 14 MWNVVFSPDDKYVLSGSQS----------G--KINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASG 71 (181)
Q Consensus 14 ~~~~~~s~~g~~l~~~~~d----------~--~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~ 71 (181)
.-+|.|+++|.+.+..... + .+..++..++++...+... ......++|+||++.|+..
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 3578888888866633221 1 3444455556655544322 2334567777777666543
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.82 E-value=1.9 Score=37.17 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=33.6
Q ss_pred eeeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe
Q psy10953 11 PVDMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD 50 (181)
Q Consensus 11 ~~~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~ 50 (181)
+..+.+++..++..++++-+.|+++|+|++.+++++....
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3445677888899999999999999999999999876554
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=83.30 E-value=28 Score=31.99 Aligned_cols=145 Identities=9% Similarity=0.170 Sum_probs=76.8
Q ss_pred eeEEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCcEEEEEecCCceEEEEEEC--C-CCCEEEEeeC---CCcEE
Q psy10953 12 VDMWNVVFSPDDKYVLSGS-------QSGKINLYGVETGKLEQIFDTRGKFTLSIAYS--T-DGHWIASGAL---DGIIN 78 (181)
Q Consensus 12 ~~~~~~~~s~~g~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s--~-d~~~l~~~~~---d~~v~ 78 (181)
.++.+-..+++.+|++..| -.|.+.+|.++.+. .+.+.+|......+... + ....++.+.. .+.++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 4455666788888876332 24778888776433 23333332211112111 1 1233333322 26788
Q ss_pred EEeCCCC--------------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee-cCCcEEEEEEc
Q psy10953 79 IFDANTG--------------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK-HADQVWCVCVA 137 (181)
Q Consensus 79 i~d~~~~--------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~s 137 (181)
+.++... ......++..++....+...+.-|.+++||+.++..+..-+ ....|-..+-+
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccC
Confidence 8877432 01234566777777777788889999999999987664433 22333333333
Q ss_pred cCCCEEEEEcCCCcEEEEeC
Q psy10953 138 PDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 138 p~g~~l~~~~~d~~v~i~~~ 157 (181)
+...-+++....|.|.-..+
T Consensus 310 ~~~~g~~~vnr~G~vl~v~v 329 (1630)
T 1xi4_A 310 EATAGIIGVNRKGQVLSVCV 329 (1630)
T ss_pred CCCCceEEEcCCceEEEEEE
Confidence 33223343445555544443
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.72 E-value=21 Score=29.54 Aligned_cols=139 Identities=13% Similarity=0.111 Sum_probs=80.4
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCC------
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGH------ 86 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~------ 86 (181)
.+.++....+| .|..|+.+| +..||..+.++..........+.++.. .+|. |-.+..+ -+..||..++.
T Consensus 64 ~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~ 138 (758)
T 3ott_A 64 RIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDT 138 (758)
T ss_dssp CEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECH
T ss_pred eEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEecc
Confidence 46677666665 466666554 778998877654311111122444443 3454 4445544 57778865432
Q ss_pred ------cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeec-------CCcEEEEEEccCCCEEEEEcCCCcEE
Q psy10953 87 ------SSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKH-------ADQVWCVCVAPDGDKFVSVGEDKAVH 153 (181)
Q Consensus 87 ------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~v~~~~~sp~g~~l~~~~~d~~v~ 153 (181)
...|.++..+++|++.+. +.+ -+..||..+.... .+.. ...|.++...++++.|..+.. +.+.
T Consensus 139 ~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~ 214 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTKDNQIYVG-TYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLF 214 (758)
T ss_dssp HHHCCSCSCEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEE
T ss_pred CCCCcCCCeEEEEEEcCCCCEEEE-eCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCe
Confidence 234777777888886653 333 4778887665422 2211 124788888877776666663 4677
Q ss_pred EEeCCCC
Q psy10953 154 MYSYKPE 160 (181)
Q Consensus 154 i~~~~~~ 160 (181)
.++..++
T Consensus 215 ~~~~~~~ 221 (758)
T 3ott_A 215 QYFPSTG 221 (758)
T ss_dssp EEETTTT
T ss_pred EEcCCCC
Confidence 7776654
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=80.94 E-value=22 Score=32.65 Aligned_cols=99 Identities=8% Similarity=0.195 Sum_probs=64.1
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC---------C-
Q psy10953 17 VVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTG---------H- 86 (181)
Q Consensus 17 ~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---------~- 86 (181)
.-.+|..+.+|.=. ..++.+||+++.+.+..+..... +.-+.|-.+.. |+... +..|+-|++... |
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~-VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC-ceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 34677777776554 57899999988877766665555 44688854433 33222 347899998531 1
Q ss_pred ---cccEEEEEEcCCCCEEEEEe-------CCCcEEEEecCCC
Q psy10953 87 ---SSWVLSTAFTRDGKFFISAS-------ADHTVRVWNFARR 119 (181)
Q Consensus 87 ---~~~v~~~~~s~~~~~l~~~~-------~d~~i~v~d~~~~ 119 (181)
...|..-..+++.++++-.+ ..|.+.+|....+
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 23466667788888776433 3478888887654
No 353
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=80.87 E-value=16 Score=27.71 Aligned_cols=132 Identities=14% Similarity=0.154 Sum_probs=80.9
Q ss_pred CCcEEEEeCCCCcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCCCCc-------ccEEEEEEcCCCCEEEE
Q psy10953 32 SGKINLYGVETGKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANTGHS-------SWVLSTAFTRDGKFFIS 104 (181)
Q Consensus 32 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~-------~~v~~~~~s~~~~~l~~ 104 (181)
+..+.+.|+..++....-....+ +.-.+|..+.++.-+ ...+.++|+++..+ ..|..=.|-.+ +.|+-
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad---sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~l 122 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 122 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS---EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEE
T ss_pred CCEEEEEECCCCCCccccccccc---eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEE
Confidence 34677788876554332222222 344588888777655 67899999987532 23333334333 33333
Q ss_pred EeCCCcEEEEecCCC-ceeeeee-c----CCcEEEEEEccCCCEEEEEcC---C----CcEEEEeCCCCeeEEEcCCC
Q psy10953 105 ASADHTVRVWNFARR-ENMHTFK-H----ADQVWCVCVAPDGDKFVSVGE---D----KAVHMYSYKPEEEVEVNGGG 169 (181)
Q Consensus 105 ~~~d~~i~v~d~~~~-~~~~~~~-~----~~~v~~~~~sp~g~~l~~~~~---d----~~v~i~~~~~~~~~~~~~~~ 169 (181)
.+ +..|+-|++... .+...+. | ...|...+.+++.+.++..+. + |.+++|+...+....+.++.
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGha 199 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA 199 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSE
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeee
Confidence 33 348999998753 3333343 1 346888999999998877662 2 56889999776555544443
No 354
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=78.96 E-value=34 Score=30.32 Aligned_cols=122 Identities=10% Similarity=0.048 Sum_probs=69.8
Q ss_pred cEEEEeCCCCcEEEEEecC-CceEEEEEECCCCCEEEEeeCCCcEEEEeCCCC---------CcccEEEEEEcCC-----
Q psy10953 34 KINLYGVETGKLEQIFDTR-GKFTLSIAYSTDGHWIASGALDGIINIFDANTG---------HSSWVLSTAFTRD----- 98 (181)
Q Consensus 34 ~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~~---------~~~~v~~~~~s~~----- 98 (181)
.|++.+....+....+... +..+...+.. +.+++.+. .+.+.++.+..+ -...|.++++.|.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 4666665544444444322 2223233332 23455444 566666655322 1245788888763
Q ss_pred -CCEEEEEeC-CCcEEEEecCCCceeeeeecC--CcEEEEEEcc--CCCEEEEEcCCCcEEEEeCC
Q psy10953 99 -GKFFISASA-DHTVRVWNFARRENMHTFKHA--DQVWCVCVAP--DGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 99 -~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~--~~v~~~~~sp--~g~~l~~~~~d~~v~i~~~~ 158 (181)
+++++.|.. |++++++++...+.+...... ..+.++++.. ..-++..|-.||.+..+.+.
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 468888885 999999999876666544432 2344444432 23467777788887666654
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.96 E-value=2.3 Score=37.45 Aligned_cols=36 Identities=11% Similarity=0.163 Sum_probs=30.4
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEe
Q psy10953 15 WNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFD 50 (181)
Q Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~ 50 (181)
-+++..++..++++-+.|+++|+|++.+++++....
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345566788999999999999999999999877654
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=78.76 E-value=27 Score=28.92 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=85.2
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcEEEEEec------CCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC--
Q psy10953 13 DMWNVVFSPDDKYVLSGSQSGKINLYGVETGKLEQIFDT------RGKFTLSIAYSTDGHWIASGALDGIINIFDANT-- 84 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~------~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~-- 84 (181)
.+.++.-.++|+ |..|. ++-+..+|.++++....... ....+.++...++|++.+ |...+-+..+|..+
T Consensus 374 ~v~~i~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~~~~~ 450 (758)
T 3ott_A 374 RIRHIYEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDKHKLM 450 (758)
T ss_dssp CEEEEEECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEHHHHH
T ss_pred ceEEEEECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEcccccc
Confidence 367777777776 44555 45788899888776543211 123456777777776444 55444466666421
Q ss_pred -----------------C-CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeee----cCCcEEEEEEccCCCE
Q psy10953 85 -----------------G-HSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFK----HADQVWCVCVAPDGDK 142 (181)
Q Consensus 85 -----------------~-~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~~~~~sp~g~~ 142 (181)
+ ....|.++..+++|++.+.++..+-+..+|..+++...... ....+.++....+|+.
T Consensus 451 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l 530 (758)
T 3ott_A 451 QSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLL 530 (758)
T ss_dssp HCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCE
T ss_pred ccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCE
Confidence 0 11247888888999977633334458888987654332211 1235778888888876
Q ss_pred EEEEcCCCcEEEEeCCCC
Q psy10953 143 FVSVGEDKAVHMYSYKPE 160 (181)
Q Consensus 143 l~~~~~d~~v~i~~~~~~ 160 (181)
-+. +. +.+..|+..++
T Consensus 531 Wig-t~-~Gl~~~~~~~~ 546 (758)
T 3ott_A 531 WVG-FH-GGVMRINPKDE 546 (758)
T ss_dssp EEE-ET-TEEEEECC--C
T ss_pred EEE-ec-CceEEEecCCC
Confidence 654 43 45777776443
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.13 E-value=3.3 Score=34.57 Aligned_cols=31 Identities=16% Similarity=0.333 Sum_probs=26.9
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEEEec
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQIFDT 51 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 51 (181)
.+..++++-+.|+++|+|++++++++.....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3578999999999999999999998876654
No 358
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=77.11 E-value=26 Score=27.82 Aligned_cols=34 Identities=9% Similarity=0.142 Sum_probs=27.6
Q ss_pred EEEEEEccCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy10953 131 VWCVCVAPDGDKFVSVGEDKAVHMYSYKPEEEVE 164 (181)
Q Consensus 131 v~~~~~sp~g~~l~~~~~d~~v~i~~~~~~~~~~ 164 (181)
..++-+|+.-..++....-|.+++||+.++..+-
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccceeee
Confidence 4567778877888888999999999998876553
No 359
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=72.83 E-value=13 Score=22.52 Aligned_cols=45 Identities=18% Similarity=0.321 Sum_probs=24.0
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEEE
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFIS 104 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~~ 104 (181)
.+.+..||++++.- .++. .+|...+........+.+.++|++++-
T Consensus 54 ~L~l~~dGnLvL~d-~~~~-~vWss~t~~~~~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 54 SAVLQSDGNFVVYD-SSGR-SLWASHSTRGSGNYILILQDDGNVIIY 98 (105)
T ss_dssp EEEECTTSCEEEEC-TTCC-EEEECCCCCCSSCEEEEECTTSCEEEE
T ss_pred EEEEeCCccEEEEC-CCcE-EEEEecCCCCCCCEEEEEeCCCeEEEE
Confidence 47788888866543 3333 367665433222233445555555443
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=71.19 E-value=9.2 Score=32.01 Aligned_cols=30 Identities=7% Similarity=0.438 Sum_probs=25.0
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCceeeeee
Q psy10953 97 RDGKFFISASADHTVRVWNFARRENMHTFK 126 (181)
Q Consensus 97 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 126 (181)
.+..++++-+.|+++|+||+++++.+.+..
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 346799999999999999999988666553
No 361
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=70.00 E-value=59 Score=28.85 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=46.3
Q ss_pred eeEEEEEEcCC------CCEEEEEeC-CCcEEEEeCCCCcEEEEEecCC-ceEEEEEEC--CCCCEEEEeeCCCcEEEEe
Q psy10953 12 VDMWNVVFSPD------DKYVLSGSQ-SGKINLYGVETGKLEQIFDTRG-KFTLSIAYS--TDGHWIASGALDGIINIFD 81 (181)
Q Consensus 12 ~~~~~~~~s~~------g~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s--~d~~~l~~~~~d~~v~i~d 81 (181)
.++.++++.|. .++++.|.. |++++++++.+-+.+....... ....++.+. ....+|..|-.||.+..+.
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 45889998864 368899996 9999999998766554433321 122233221 2235677888999887665
Q ss_pred C
Q psy10953 82 A 82 (181)
Q Consensus 82 ~ 82 (181)
+
T Consensus 634 ~ 634 (1158)
T 3ei3_A 634 L 634 (1158)
T ss_dssp E
T ss_pred E
Confidence 4
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=68.38 E-value=34 Score=25.46 Aligned_cols=147 Identities=12% Similarity=0.116 Sum_probs=83.5
Q ss_pred CeeeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCcE-----EEEEec-CCceEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy10953 10 GPVDMWNVVFSP--DDKYVLSGSQSGKINLYGVETGKL-----EQIFDT-RGKFTLSIAYSTDGHWIASGALDGIINIFD 81 (181)
Q Consensus 10 ~~~~~~~~~~s~--~g~~l~~~~~d~~i~~~d~~~~~~-----~~~~~~-~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d 81 (181)
++.=+.-+.+.+ ++..++..+.+|.++-..+...+. ...+.. .++.+..+........++..+..|.+..+.
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 333344455553 578899999999999887643211 111111 244444554444556788888889888876
Q ss_pred CC--C----C------------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-------ceeeeee--c-CCcEEE
Q psy10953 82 AN--T----G------------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-------ENMHTFK--H-ADQVWC 133 (181)
Q Consensus 82 ~~--~----~------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~--~-~~~v~~ 133 (181)
.. . + ....|.++...+.+..++..+..|.++.-.+... +-+..+. . .+.+..
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~ 253 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVG 253 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEE
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEE
Confidence 65 2 1 1224556555556678888999999988875422 2222222 1 344544
Q ss_pred EEEccCCCEEEEEcCCCcEEEEe
Q psy10953 134 VCVAPDGDKFVSVGEDKAVHMYS 156 (181)
Q Consensus 134 ~~~sp~g~~l~~~~~d~~v~i~~ 156 (181)
+....+...++..+.+|.+..++
T Consensus 254 ~~~~~~~~~i~l~T~~G~~ir~~ 276 (327)
T 3uc1_A 254 ALIVDDDSELYAVTSGGGVIRTA 276 (327)
T ss_dssp EEEECTTCEEEEEEGGGCEEEEE
T ss_pred EEEeCCCccEEEEcCCCeEEEEe
Confidence 44433444555555555554444
No 363
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=64.71 E-value=22 Score=21.83 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=14.8
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+.+..+|.+++.- .++.+ +|...+
T Consensus 60 ~l~l~~dGNLVl~d-~~~~~-iW~S~t 84 (113)
T 3mez_B 60 FMRLGHSGELDITD-DRLNT-VFVSNT 84 (113)
T ss_dssp EEEECTTSCEEEEC-TTSCE-EEECSC
T ss_pred EEEEeCCCcEEEEC-CCCCE-EEECCC
Confidence 46777788866543 34443 676644
No 364
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=58.24 E-value=29 Score=21.17 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=22.3
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEEE
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFIS 104 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~~ 104 (181)
.+.+..||++++... ++ +|...+........+.+..+|++++.
T Consensus 23 ~L~~q~dGnLvl~~~-~~---vW~snt~~~~~~~~l~l~~dGNLVl~ 65 (111)
T 3mez_A 23 AFVMQGDCNLVLYNE-AG---GFQSNTHGRGVDCTLRLNNRGQLEIH 65 (111)
T ss_dssp EEEECTTSCEEEECS-SC---CEECCCTTSCSSCEEEECTTSCEEEE
T ss_pred EEEEccCCeEEEECC-CC---EEECCcccCCcCEEEEEcCCCcEEEE
Confidence 466677777655432 22 77765433222233455566665443
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.41 E-value=72 Score=23.40 Aligned_cols=137 Identities=12% Similarity=0.196 Sum_probs=78.4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEE-------EEEe-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC---C-----
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLE-------QIFD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDAN---T----- 84 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~-------~~~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~---~----- 84 (181)
|+...+++.+.+|.|+-..+...+.. .-+. ..++.+..+........++..+..|.++..... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 46677888899999998866433211 1111 123444444444445567777888887776542 1
Q ss_pred -C----------CcccEEEEEEcC---CCCEEEEEeCCCcEEEEecCCC-------ceeeeeecCCcEEEEEEccCCCEE
Q psy10953 85 -G----------HSSWVLSTAFTR---DGKFFISASADHTVRVWNFARR-------ENMHTFKHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 85 -~----------~~~~v~~~~~s~---~~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~~~~~v~~~~~sp~g~~l 143 (181)
| ....+.++..-+ +.++++..+..|.++...+... .....+...+.+..+....++..+
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i 165 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKV 165 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEE
Confidence 0 112344432222 4567888899999998876432 111222334566666555555677
Q ss_pred EEEcCCCcEEEEeC
Q psy10953 144 VSVGEDKAVHMYSY 157 (181)
Q Consensus 144 ~~~~~d~~v~i~~~ 157 (181)
+..+.+|.+..+..
T Consensus 166 ~l~T~~G~~~r~~~ 179 (312)
T 1suu_A 166 ICLSKKGSAFIFNS 179 (312)
T ss_dssp EEEETTSEEEEEEG
T ss_pred EEEeCCCcEEEEEH
Confidence 77888888777765
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.83 E-value=85 Score=22.59 Aligned_cols=135 Identities=10% Similarity=0.033 Sum_probs=78.2
Q ss_pred CCCEEEEEeCCCcEEEE---eCCCCcEEEEEecCCceEEEEEECC-CCCEEEEeeCCCcEEEEeCCCC------------
Q psy10953 22 DDKYVLSGSQSGKINLY---GVETGKLEQIFDTRGKFTLSIAYST-DGHWIASGALDGIINIFDANTG------------ 85 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~---d~~~~~~~~~~~~~~~~~~~~~~s~-d~~~l~~~~~d~~v~i~d~~~~------------ 85 (181)
...+|+.-+.+|.++.. ++..++-..++. .+..+..+.... +...++..+.+|.++...+..-
T Consensus 34 t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~l 112 (276)
T 3no0_A 34 FTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKL 112 (276)
T ss_dssp TTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCC
T ss_pred CCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEec
Confidence 34455555567776644 333221111222 344444443321 4678888999999998875321
Q ss_pred -CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCC---------CceeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10953 86 -HSSWVLSTAFTRDGKFFISASADHTVRVWNFAR---------RENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMY 155 (181)
Q Consensus 86 -~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~ 155 (181)
....+..+......+.++..+..|.++.++... +.....+...+.|..+...+++..++..+..|.++..
T Consensus 113 kegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~ 192 (276)
T 3no0_A 113 TEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKI 192 (276)
T ss_dssp CTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEE
T ss_pred CCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEe
Confidence 123455555555566788888899988887532 1111223334566666555666788888888888777
Q ss_pred eC
Q psy10953 156 SY 157 (181)
Q Consensus 156 ~~ 157 (181)
.+
T Consensus 193 ~~ 194 (276)
T 3no0_A 193 SH 194 (276)
T ss_dssp EG
T ss_pred EH
Confidence 65
No 367
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=44.72 E-value=53 Score=20.25 Aligned_cols=44 Identities=9% Similarity=0.166 Sum_probs=22.4
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEE
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFI 103 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~ 103 (181)
.+.+..+|++++.. .++. .+|...+........+.+.++|.+++
T Consensus 64 ~l~l~~dGNLVl~d-~~~~-~lW~S~~~~~~g~~~l~l~~~Gnlvl 107 (119)
T 1b2p_A 64 RAVLQPDGVLVVIT-NENV-TVWQSPVAGKAGHYVLVLQPDRNVVI 107 (119)
T ss_dssp EEEECTTSCEEEEC-TTCC-EEEECSCCCCSSCEEEEECTTSCEEE
T ss_pred EEEEccCCEEEEEe-CCCc-EEEcCCCCCCCCCEEEEEECCCcEEE
Confidence 46677788765543 3333 46765433222223455556555433
No 368
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=44.55 E-value=50 Score=19.90 Aligned_cols=25 Identities=20% Similarity=0.403 Sum_probs=14.9
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+.+..+|++++... ++. .+|...+
T Consensus 53 ~l~l~~dGNLvl~~~-~~~-~~W~S~t 77 (109)
T 3dzw_A 53 HLSMQSDGNLVVYSP-RNN-PIWASNT 77 (109)
T ss_dssp EEEECTTSCEEEECT-TSC-EEEECCC
T ss_pred EEEEeCCCCEEEECC-CCC-EEEECCC
Confidence 467788888665432 333 4776544
No 369
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=43.19 E-value=87 Score=22.27 Aligned_cols=70 Identities=16% Similarity=0.137 Sum_probs=42.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCC-------CceeeeeecCCcEEEEEEc-cCCCEEEEEcCCCcEEEEeCC
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFAR-------RENMHTFKHADQVWCVCVA-PDGDKFVSVGEDKAVHMYSYK 158 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~v~~~~~s-p~g~~l~~~~~d~~v~i~~~~ 158 (181)
.|.++....++++++.++..|.++...+.. +.....+...+.+..+... .++..++..+.+|.+..++..
T Consensus 85 ~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 85 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 455553324566788899999999987643 1222223333455444444 345567778888877777653
No 370
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=39.91 E-value=62 Score=19.59 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=14.8
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANT 84 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~ 84 (181)
.+.+..+|++++.. .++. .+|...+
T Consensus 57 ~l~l~~dGNLvl~d-~~~~-~iW~S~t 81 (110)
T 3r0e_B 57 FLRLNHKGELIIKD-DDFK-TIWSSRS 81 (110)
T ss_dssp EEEECTTSCEEEEC-TTCC-EEEECCC
T ss_pred EEEEeCCCcEEEEe-CCCC-EEEEcCC
Confidence 46777888866543 3443 3676544
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=38.38 E-value=1.2e+02 Score=22.43 Aligned_cols=136 Identities=9% Similarity=0.101 Sum_probs=75.1
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCC----cEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC---C------C--
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETG----KLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN---T------G-- 85 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~---~------~-- 85 (181)
|+...+++.+.+|.|+--.+... .....+ ..++.+..+........++..++.|.++.+... . |
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~l-ke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAM-KDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCC-CTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCcccccc-CCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 56667888888998887754311 100011 123333344333344556667777776666431 0 1
Q ss_pred --------CcccEEEE-EEcC--CCCEEEEEeCCCcEEEEecCCCc------eee--eeecCCcEEEEEEccCCCEEEEE
Q psy10953 86 --------HSSWVLST-AFTR--DGKFFISASADHTVRVWNFARRE------NMH--TFKHADQVWCVCVAPDGDKFVSV 146 (181)
Q Consensus 86 --------~~~~v~~~-~~s~--~~~~l~~~~~d~~i~v~d~~~~~------~~~--~~~~~~~v~~~~~sp~g~~l~~~ 146 (181)
....|.++ .... ++.+++.++.+|.++-..+.... -.. .+...+.+..+........++..
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEE
Confidence 11234443 3332 25678899999999998764221 111 22233555555554455567777
Q ss_pred cCCCcEEEEeC
Q psy10953 147 GEDKAVHMYSY 157 (181)
Q Consensus 147 ~~d~~v~i~~~ 157 (181)
+.+|.+..++.
T Consensus 162 T~~G~~irf~~ 172 (323)
T 1wp5_A 162 THNGYALWFDE 172 (323)
T ss_dssp ETTSEEEEEEG
T ss_pred eCCCcEEEEEH
Confidence 77777776664
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=36.24 E-value=1.2e+02 Score=21.80 Aligned_cols=135 Identities=10% Similarity=0.049 Sum_probs=80.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCc------EEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCCC----C------
Q psy10953 22 DDKYVLSGSQSGKINLYGVETGK------LEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDANT----G------ 85 (181)
Q Consensus 22 ~g~~l~~~~~d~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~~----~------ 85 (181)
++..++..+.+|.++-..+..-. ....+. .++.+..+........++..+..|.+..+.... +
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 56788899999999988765421 111111 344555555555566788888899888886421 0
Q ss_pred ------CcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC-------ceeeeeecCCcEEEEEEccCCCEEEEEcCCCcE
Q psy10953 86 ------HSSWVLSTAFTRDGKFFISASADHTVRVWNFARR-------ENMHTFKHADQVWCVCVAPDGDKFVSVGEDKAV 152 (181)
Q Consensus 86 ------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v 152 (181)
....|.++...+++..++..+..|.++..++... +-+..+...+.+..+....+...++..+.+|.+
T Consensus 158 ~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ 237 (276)
T 3no0_A 158 QGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKA 237 (276)
T ss_dssp ECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCE
T ss_pred EEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeE
Confidence 1234555544455668888899999988876431 122222334455544333333456666666766
Q ss_pred EE--EeC
Q psy10953 153 HM--YSY 157 (181)
Q Consensus 153 ~i--~~~ 157 (181)
.. ++.
T Consensus 238 ir~~~~~ 244 (276)
T 3no0_A 238 FYDKINQ 244 (276)
T ss_dssp EEEEEEG
T ss_pred EEeeeCH
Confidence 66 654
No 373
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=35.06 E-value=1.5e+02 Score=22.50 Aligned_cols=135 Identities=11% Similarity=0.122 Sum_probs=77.5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCC---------CcEEEEEecCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC--------
Q psy10953 21 PDDKYVLSGSQSGKINLYGVET---------GKLEQIFDTRGKFTLSIAYSTDGHWIASGALDGIINIFDAN-------- 83 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~-------- 83 (181)
|+...+++.+.+|.|+--.+.. +.....+ ..++.+..+........++..+..|.++.+...
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~l-ke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAST-KEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEEC-SCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceeccc-CCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 6778889999999999765421 1111122 234455455555455667777778887766532
Q ss_pred -CC----------CcccEEEEE-Ec--CCCCEEEEEeCCCcEEEEecCCCc-------eeeeeecCCcEEEEEEccCCCE
Q psy10953 84 -TG----------HSSWVLSTA-FT--RDGKFFISASADHTVRVWNFARRE-------NMHTFKHADQVWCVCVAPDGDK 142 (181)
Q Consensus 84 -~~----------~~~~v~~~~-~s--~~~~~l~~~~~d~~i~v~d~~~~~-------~~~~~~~~~~v~~~~~sp~g~~ 142 (181)
.| ....|.++. +. .++++++.++..|.++...+.... ....+...+.+..+........
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRD 163 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCE
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCce
Confidence 11 112344433 32 235689999999999988764321 1112233445555554445556
Q ss_pred EEEEcCCCcEEEEe
Q psy10953 143 FVSVGEDKAVHMYS 156 (181)
Q Consensus 143 l~~~~~d~~v~i~~ 156 (181)
++..+.+|.+..++
T Consensus 164 i~l~T~~G~~irf~ 177 (370)
T 3l6v_A 164 VLLFASNGKTVRFG 177 (370)
T ss_dssp EEEEETTSEEEEEE
T ss_pred EEEEeCCCeEEEEE
Confidence 66677677665555
No 374
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=34.24 E-value=1.3e+02 Score=23.82 Aligned_cols=54 Identities=4% Similarity=0.025 Sum_probs=34.5
Q ss_pred EEEEEeCCCcEEEEecC-CCc-------eeeee---ecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 101 FFISASADHTVRVWNFA-RRE-------NMHTF---KHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 101 ~l~~~~~d~~i~v~d~~-~~~-------~~~~~---~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.++-|+.+|.|+-.-+. ... .+..+ +...+|..+.++++++.|++++.++-+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46677888877544332 211 12222 23567899999999999999998765544
No 375
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=31.44 E-value=87 Score=18.83 Aligned_cols=44 Identities=11% Similarity=0.183 Sum_probs=23.8
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEE
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFI 103 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~ 103 (181)
.+.+..+|++++... ++. .+|...+........+.+.++|.+++
T Consensus 54 ~l~l~~dGNLVl~~~-~~~-~~W~S~t~~~~g~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 54 RLTLHNNGNLVIYDQ-SNR-VIWQTKTNGKEDHYVLVLQQDRNVVI 97 (110)
T ss_dssp EEEECTTSCEEEECT-TCC-EEEECCCCCSSSCCEEEECTTSCEEE
T ss_pred EEEEeCCCCEEEECC-CCc-EEEecCCCCCCCCEEEEEeCCccEEE
Confidence 467778888665533 343 46765543322223455566666444
No 376
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=29.03 E-value=76 Score=17.41 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=21.6
Q ss_pred CCceeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 118 RRENMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 118 ~~~~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
.+.....+.|.+..+.+.....|+.|.+
T Consensus 35 ~g~~~v~I~H~G~~Y~LR~Tr~GKLILT 62 (63)
T 2loj_A 35 GPDGKVIIDHNGQEYLLRKTQAGKLLLT 62 (63)
T ss_dssp TTTCEEEEEETTEEEEEEEETTTEEEEE
T ss_pred CCCCEEEEEeCCeEEEeEEccCCceeec
Confidence 3445556778899999999999988764
No 377
>3izo_F Fiber; pentameric penton base, trimeri viral protein; 3.60A {Human adenovirus 5}
Probab=26.20 E-value=2.1e+02 Score=23.28 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=18.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCc
Q psy10953 89 WVLSTAFTRDGKFFISASADHTVRVWNFARRE 120 (181)
Q Consensus 89 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 120 (181)
....+.|+.+|+++-++..+.. -|..+.+.
T Consensus 455 ~~i~L~FD~~G~Ll~~s~l~~~--~W~~r~~~ 484 (581)
T 3izo_F 455 AHLIIRFDENGVLLNNSFLDPE--YWNFRNGD 484 (581)
T ss_pred EEEEEEECCCCCCCcCCCCCcc--cccccCCC
Confidence 3456778888887654443322 57766544
No 378
>2jra_A Protein RPA2121; domain-swapped dimer, structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris}
Probab=25.73 E-value=93 Score=17.29 Aligned_cols=28 Identities=7% Similarity=0.188 Sum_probs=22.0
Q ss_pred CCceeeeeecCCcEEEEEEccCCCEEEE
Q psy10953 118 RRENMHTFKHADQVWCVCVAPDGDKFVS 145 (181)
Q Consensus 118 ~~~~~~~~~~~~~v~~~~~sp~g~~l~~ 145 (181)
.+.....+.|.+..+.+.....|+.|.+
T Consensus 39 ~g~~ev~I~H~G~~Y~LR~Tr~GKLILT 66 (67)
T 2jra_A 39 TVDREIVIAHGDDRYRLRLTSQNKLILT 66 (67)
T ss_dssp TSSSEEEEEETTEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEeCCeEEEeEEccCCceeec
Confidence 4445556778899999999999998864
No 379
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=25.32 E-value=1.2e+02 Score=18.26 Aligned_cols=41 Identities=17% Similarity=0.282 Sum_probs=19.6
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEEE
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFIS 104 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~~ 104 (181)
.+.+..||+.++.- + +|...+.....-..+.+..+|++++.
T Consensus 24 ~L~~q~dGNLvl~~---~---~Wssnt~~~~~~~~l~l~~dGnLvl~ 64 (109)
T 3r0e_A 24 DLVMQDDCNLVLYN---G---NWQSNTANNGRDCKLTLTDYGELVIK 64 (109)
T ss_dssp EEEECTTSCEEEET---T---TEECCCTTSCSSCEEEECTTSCEEEE
T ss_pred EEEEecCCeEEEEe---C---eEEcCCCCCCCcEEEEEcCCCeEEEE
Confidence 34556666654432 1 46554432222233556666665543
No 380
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.75 E-value=2.1e+02 Score=20.81 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=59.0
Q ss_pred CCCEEEEeeCCCcEEEEeCCC--------------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC---------c
Q psy10953 64 DGHWIASGALDGIINIFDANT--------------GHSSWVLSTAFTRDGKFFISASADHTVRVWNFARR---------E 120 (181)
Q Consensus 64 d~~~l~~~~~d~~v~i~d~~~--------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~---------~ 120 (181)
+...++..+.+|.++...+.. .....+..+......+.++..+.+|.+..++...- .
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv 192 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGV 192 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCE
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCe
Confidence 456788888899888877531 11234445444444566778888899888876431 1
Q ss_pred eeeeeecCCcEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10953 121 NMHTFKHADQVWCVCVAPDGDKFVSVGEDKAVHMYSY 157 (181)
Q Consensus 121 ~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i~~~ 157 (181)
....+...+.+..+..-+++..+++.+..|.....++
T Consensus 193 ~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 193 CGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp ECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 1112233455666655556667778888888777776
No 381
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.59 E-value=1.3e+02 Score=18.17 Aligned_cols=78 Identities=10% Similarity=0.119 Sum_probs=39.9
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEc
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVA 137 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 137 (181)
.+.+..||++++..... .-.+|...+........+.+..+|++++.-. ++.+ +|...+.. .. ....+.+.
T Consensus 27 ~L~~q~dGNLvL~~~~~-~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~-~~~~-iW~S~t~~------~~-~~~~~~L~ 96 (113)
T 3mez_B 27 SLVMRDDCNLVLTKGSK-TNIVWESGTSGRGQHCFMRLGHSGELDITDD-RLNT-VFVSNTVG------QE-GDYVLILQ 96 (113)
T ss_dssp EEEECTTSCEEEEETTT-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-TSCE-EEECSCCC------SS-SCCEEEEC
T ss_pred EEEEcCCCEEEEEECCC-CEEEEECCcccCCcCEEEEEeCCCcEEEECC-CCCE-EEECCCcC------CC-CCEEEEEc
Confidence 46677788866653322 3457876553322223466777777665433 3333 56543311 01 11345566
Q ss_pred cCCCEEEE
Q psy10953 138 PDGDKFVS 145 (181)
Q Consensus 138 p~g~~l~~ 145 (181)
+||++.+-
T Consensus 97 ~dGnlvly 104 (113)
T 3mez_B 97 INGQAVVY 104 (113)
T ss_dssp TTSCEEEE
T ss_pred CCceEEEe
Confidence 66665553
No 382
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=22.98 E-value=1.3e+02 Score=18.10 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=42.4
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCceeeeeecCCcEEEEEEc
Q psy10953 58 SIAYSTDGHWIASGALDGIINIFDANTGHSSWVLSTAFTRDGKFFISASADHTVRVWNFARRENMHTFKHADQVWCVCVA 137 (181)
Q Consensus 58 ~~~~s~d~~~l~~~~~d~~v~i~d~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 137 (181)
.+.|..||+..+.- +.-.+|...+........+.+..+|++++.-. ++. .+|...+. .......+.+.
T Consensus 23 ~L~~~~dgnlvly~---~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~-~~~-~vW~S~~~-------~~~g~~~l~l~ 90 (115)
T 2dpf_A 23 TLTIQNKCNLVKYQ---NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDH-NNN-DVWGSACW-------GDNGKYALVLQ 90 (115)
T ss_dssp EEEECTTSCEEEEE---TTEEEEECSCTTSCSSCEEEECTTSCEEEECT-TCC-EEEECCCC-------CSSSCCEEEEC
T ss_pred EEEEcCCCcEEEEe---CCEEEEeCCCCCCCCceEEEECCCCcEEEECC-Cce-EEEEcCCC-------CCCCCEEEEEe
Confidence 35556677655442 23457876543222223455667777655432 233 35643321 01123356777
Q ss_pred cCCCEEEEEcCCCcEEEEeCCC
Q psy10953 138 PDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 138 p~g~~l~~~~~d~~v~i~~~~~ 159 (181)
++|.+++- . . .+|.-.+
T Consensus 91 ~dGnlvl~-~--~--~~W~S~~ 107 (115)
T 2dpf_A 91 KDGRFVIY-G--P--VLWSLGP 107 (115)
T ss_dssp TTSCEEEE-C--S--EEECSST
T ss_pred CCCeEEEE-C--C--CEEECCC
Confidence 88875553 2 2 5776544
No 383
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.91 E-value=67 Score=26.78 Aligned_cols=32 Identities=9% Similarity=0.003 Sum_probs=23.9
Q ss_pred EEEE-EcCCCCEEEEEe-----CCCcEEEEeCCCCcEE
Q psy10953 15 WNVV-FSPDDKYVLSGS-----QSGKINLYGVETGKLE 46 (181)
Q Consensus 15 ~~~~-~s~~g~~l~~~~-----~d~~i~~~d~~~~~~~ 46 (181)
..++ ++||+++++.+- +-.+++++|+.+++.+
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 4455 899999987432 2347999999999876
No 384
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=22.41 E-value=2.3e+02 Score=20.61 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=73.2
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcEEEE-------Ee-cCCceEEEEEECCCCCEEEEeeCCCcEEEEeCC---C-----
Q psy10953 21 PDDKYVLSGSQSGKINLYGVETGKLEQI-------FD-TRGKFTLSIAYSTDGHWIASGALDGIINIFDAN---T----- 84 (181)
Q Consensus 21 ~~g~~l~~~~~d~~i~~~d~~~~~~~~~-------~~-~~~~~~~~~~~s~d~~~l~~~~~d~~v~i~d~~---~----- 84 (181)
|+...+++.+.+|.|+--.+...+.... +. ..++.+..+........++..+..|.++.+... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 4566788888999988776654322110 00 123333333333344566667777777766531 1
Q ss_pred -C----------CcccEEEEEE-c--CCCCEEEEEeCCCcEEEEecCCCc-----eee--eeecCCcEEEEEEccCCCEE
Q psy10953 85 -G----------HSSWVLSTAF-T--RDGKFFISASADHTVRVWNFARRE-----NMH--TFKHADQVWCVCVAPDGDKF 143 (181)
Q Consensus 85 -~----------~~~~v~~~~~-s--~~~~~l~~~~~d~~i~v~d~~~~~-----~~~--~~~~~~~v~~~~~sp~g~~l 143 (181)
| ....|.++.. . .++.+++..+..|.++--.+.... ... .+...+.+..+....+...+
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i 160 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEV 160 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEE
Confidence 1 1123444432 2 345678889999999988764211 111 22233555555544455567
Q ss_pred EEEcCCCcEEEEeC
Q psy10953 144 VSVGEDKAVHMYSY 157 (181)
Q Consensus 144 ~~~~~d~~v~i~~~ 157 (181)
+..+.+|.+..++.
T Consensus 161 ~l~T~~G~~irf~~ 174 (307)
T 1zi0_A 161 MLFSAEGKVVRFKE 174 (307)
T ss_dssp EEEETTSEEEEEEG
T ss_pred EEECCCCcEEEEEH
Confidence 77777777766664
No 385
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.60 E-value=2.7e+02 Score=21.19 Aligned_cols=147 Identities=11% Similarity=0.107 Sum_probs=83.3
Q ss_pred eEEEEEEcCCCCEEE--EEeC-------------CCcEEEEeCCCC--cEEEEEecC------CceEEEEEEC---CC--
Q psy10953 13 DMWNVVFSPDDKYVL--SGSQ-------------SGKINLYGVETG--KLEQIFDTR------GKFTLSIAYS---TD-- 64 (181)
Q Consensus 13 ~~~~~~~s~~g~~l~--~~~~-------------d~~i~~~d~~~~--~~~~~~~~~------~~~~~~~~~s---~d-- 64 (181)
.+..+.+.+++++=+ +|-- -.+|.+||+.++ ++++.+... +.....+.+. |+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 467777777666422 2211 125889999999 988776643 2234456665 22
Q ss_pred -CCEEE-Eee-CCCcEEEEeCCCCC--------------------------cccEEEEEEcCC----CCEEEEEe-CCCc
Q psy10953 65 -GHWIA-SGA-LDGIINIFDANTGH--------------------------SSWVLSTAFTRD----GKFFISAS-ADHT 110 (181)
Q Consensus 65 -~~~l~-~~~-~d~~v~i~d~~~~~--------------------------~~~v~~~~~s~~----~~~l~~~~-~d~~ 110 (181)
+..+| ... ....+.++|+.++. ...+..++++|+ ++.|.-+. ....
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 12333 232 46678889987531 124567788887 55444333 3333
Q ss_pred EEEEe---cCCC---ceeeeeecC---CcEEEEEEc-cCCCEEEEEcCCCcEEEEeCCC
Q psy10953 111 VRVWN---FARR---ENMHTFKHA---DQVWCVCVA-PDGDKFVSVGEDKAVHMYSYKP 159 (181)
Q Consensus 111 i~v~d---~~~~---~~~~~~~~~---~~v~~~~~s-p~g~~l~~~~~d~~v~i~~~~~ 159 (181)
++-.. ++.. ..+..+... ..-..++++ .+|..+++--..+.|..|+...
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 44333 2222 122222222 234456775 6777777777888999999865
No 386
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.82 E-value=2.6e+02 Score=23.22 Aligned_cols=54 Identities=7% Similarity=0.127 Sum_probs=33.9
Q ss_pred EEEEEeCCCcEE-EEecCCCc-------eeee---eecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 101 FFISASADHTVR-VWNFARRE-------NMHT---FKHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 101 ~l~~~~~d~~i~-v~d~~~~~-------~~~~---~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.++.|+.+|.|+ +....... .+.. +....+|..+.++++++.|++++.++-+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466778888765 33222111 1112 234567889999999999999998765544
No 387
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.81 E-value=2.9e+02 Score=22.51 Aligned_cols=54 Identities=7% Similarity=0.075 Sum_probs=33.1
Q ss_pred EEEEEeCCCcEEEEec-CCC-----ceeeee---ecCCcEEEEEEccCCCEEEEEcCCCcEEE
Q psy10953 101 FFISASADHTVRVWNF-ARR-----ENMHTF---KHADQVWCVCVAPDGDKFVSVGEDKAVHM 154 (181)
Q Consensus 101 ~l~~~~~d~~i~v~d~-~~~-----~~~~~~---~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 154 (181)
.++.|+.+|.|+-.-. ... ..+..+ ....+|..+.++++.+.|++++..+-+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4566777887664322 222 111222 23457889999999999998887654443
Done!